Citrus Sinensis ID: 038614

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260---
Protein Sequence
MGGHMRSHFAKHPISSSNINPSPPKYPSSSSSLSNMQTYRSVNNRPFSGLEDESEAESSRNLTKARSKRPLRTIESVSNSVTENFLSDREVAMCLLKLSRDNWLQKDKQVVVAEAVVDEDEYVRGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLATPITKITSSAKSSGAKFIDLNLPAPEDDSEVSQV
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHcccccccccccccccccccccccccccccccccccccEccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccHHHcccccccccccccccccccccccccccccccccccEEccccccEcccccccccccHHccccccccccccccccccccccEEcccccccccccccccc
Coil and Loop (DISEMBL)
mgghmrshfakhpisssninpsppkypssssslsnmqtyrsvnnrpfsgledeseaESSRNLTkarskrplrtiesVSNSVTENFLSDREVAMCLLKLSRDNWLQKDKQVVVAEavvdedeyvrgksddgdndeeedkeedesslvsrtnkykcktcKKEFRSYqalgghkashkkikihhngssdaaaaggdavvmdqrvfkcpfcdkvfdsgqalgghkkihftylatpitkitssakssgakfidlnlpapeddsevsqv
Flexible Loop (DISEMBL)
mgghmrshfakhpisssninpspPKYPSSSSSLSNMQTYRSVNNRPfsgledeseaessrnltkarskrplrtiesvsnsvtenflsDREVAMCLLKLSrdnwlqkdkQVVVaeavvdedeyvrgksddgdndeeedkeedesslvsrtnkykcktcKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLATPITKITSSAKSSGAKFIDlnlpapeddsevsqv
Low Complexity Region (SEG)
MGGHMRSHFAKHpisssninpsppkypssssslsnMQTYRSVNNRPFSGLEDESEAESSRNLTKARSKRPLRTIESVSNSVTENFLSDREVAMCLLKLSRDNWLqkdkqvvvaeavvdedeYVRGKSddgdndeeedkeedeSSLVSRTNKYKCKTCKKEFRSYQALGGhkashkkikihhNgssdaaaaggdaVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLATPITKITSSAKSSGAKFIDLNLPAPEDDSEVSQV
Disordered region (IsUnstruct)
***********************************************************************************NFLSDREVAMCLLKLSRDNWLQKDKQVVVAEAVVDE********************************YKCKTCKKEFRSYQAL**********************AGGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLATPITKIT***************************
Disordered Region (DISOPRED)
MGGHMRS************************************************************************************AMCLL*********************************************************CKTCKKEFRSYQAL**********************************FKCPFCDKVFDSGQALGGHKKIHF**********************DLNLPAPED*******
Disordered Region (DISEMBL)
*************ISSSNI*****************QTYRSVNNRPF***********************LRTIESVSNSVTENFLSDREVAMCLLKLSRDNWLQKDKQVVVAEAVVDEDEY*************************RTNKYKCKTCKKEFRSYQA**********IKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLATPITKITSSAKSSGAKFIDLNLPAP*********
Disordered Region (DISPRO)
*************************************************************************************LSDREVAMCLLKLSR***********************************************RTNKYKCKTCKKEFRSYQALG*******************************RVFKCPFCDKVFDSGQAL***************************KFIDLNLPAPE********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGGHMRSHFAKHPISSSNINPSPPKYPSSSSSLSNMQTYRSVNNRPFSGLEDESEAESSRNLTKARSKRPLRTIESVSNSVTENFLSDREVAMCLLKLSRDNWLQKDKQVVVAEAVVDEDEYVRGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLATPITKITSSAKSSGAKFIDLNLPAPEDDSEVSQV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	263	2.2.26 [Sep-21-2011]
Q9M202	288	Zinc finger protein ZAT9	yes	no	0.897	0.819	0.322	7e-27
Q39092	267	Zinc finger protein ZAT1	no	no	0.874	0.861	0.349	1e-20
Q9SHD0	314	Zinc finger protein ZAT4	no	no	0.923	0.773	0.310	2e-20
Q9SSW2	273	Zinc finger protein AZF2	no	no	0.406	0.391	0.372	5e-14
Q681X4	286	Zinc finger protein ZAT5	no	no	0.403	0.370	0.333	9e-14
Q9LX85	164	Zinc finger protein ZAT8	no	no	0.315	0.506	0.449	7e-12
Q96289	227	Zinc finger protein ZAT10	no	no	0.589	0.682	0.294	1e-11
Q9SLD4	178	Zinc finger protein ZAT11	no	no	0.403	0.595	0.365	1e-11
Q9SSW0	193	Zinc finger protein AZF3	no	no	0.311	0.424	0.415	9e-11
O65499	284	Zinc finger protein ZAT3	no	no	0.444	0.411	0.337	1e-10

>sp|Q9M202|ZAT9_ARATH Zinc finger protein ZAT9 OS=Arabidopsis thaliana GN=ZAT9 PE=2 SV=1

 Score =  120 bits (302), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 95/295 (32%), Positives = 144/295 (48%), Gaps = 59/295 (20%)

Query: 1   MGGHMRSHFA------KHPI-----SSSNINPSPPKYPSSSSSLSNMQTYRSVNNRPFSG 49
           +GGHMRSH +      + P      + S+++ S PK+  +SS L               G
Sbjct: 19  LGGHMRSHMSNSHEEEQRPSQLSYETESDVSSSDPKFAFTSSVLLE------------DG 66

Query: 50  LEDESEAESSRNLTKARSKRPLRTIESVSNSVTENFL-----SDRE-------------- 90
             +   + +  NLT+ RSKR  +    V+  V  + L     SD+E              
Sbjct: 67  ESESESSRNVINLTRKRSKRTRKLDSFVTKKVKTSQLGYKPESDQEPPHSSASDTTTEED 126

Query: 91  VAMCLLKLSRDNWLQKDKQVVVAEAVVDEDEYVRGKSDDGDNDEEEDKEEDESSLVSRTN 150
           +A CL+ LSRD W +K+K        ++ +E   G               ++ +  +   
Sbjct: 127 LAFCLMMLSRDKW-KKNKSNKEVVEEIETEEESEG--------------YNKINRATTKG 171

Query: 151 KYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGD-AVVMDQRVFKCPFCDK 209
           +YKC+TC K F+SYQALGGH+ASHKK ++ +N +   +    D  VV+ +R+ +CP C +
Sbjct: 172 RYKCETCGKVFKSYQALGGHRASHKKNRVSNNKTEQRSETEYDNVVVVAKRIHECPICLR 231

Query: 210 VFDSGQALGGHKKIH-FTYLATPITKITSSAKSSGAKFIDLNLPAPEDDSEVSQV 263
           VF SGQALGGHK+ H    L+    +     +S   + IDLNLPAP ++ EVS V
Sbjct: 232 VFASGQALGGHKRSHGVGNLSVNQQRRVHRNESVKQRMIDLNLPAPTEEDEVSVV 286

Probable transcription factor that may be involved in stress responses.
Arabidopsis thaliana (taxid: 3702)

>sp|Q39092|ZAT1_ARATH Zinc finger protein ZAT1 OS=Arabidopsis thaliana GN=ZAT1 PE=2 SV=1

 Score =  100 bits (248), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 96/275 (34%), Positives = 142/275 (51%), Gaps = 45/275 (16%)

Query: 1   MGGHMRSHFAKHPISSSNINPSPPKYPSSSSSLSNMQTYRSVNNRPFSGLED-ESEAESS 59
           +GGHMRSH   HP+      PS P            ++Y S    P   L+D ESE ESS
Sbjct: 20  LGGHMRSHMLIHPL------PSQP------------ESYSSSMADPGFVLQDRESETESS 61

Query: 60  RNLTKARSKRPLRTIESVSNSVT-ENFLSDR----EVAMCLLKLSRDNWLQKDKQVVVAE 114
           +  ++ RS+   R+I S+ +  + E   S+     ++ + + +LS     Q+    V   
Sbjct: 62  KKPSRKRSRLNRRSISSLRHQQSNEEGKSETARAADIKIGVQELSESCTEQEPMSSVSDA 121

Query: 115 AVVDEDEYVRGKSDDGDNDEEEDKEEDESSLVSRTNKY-KCKTCKKEFRSYQALGGHKAS 173
           A  +ED  +       D  E+E++E DE     + NK+ +C+TC+K F+SYQALGGH+AS
Sbjct: 122 ATTEEDVALSLMLLSRDKWEKEEEESDEERWKKKRNKWFECETCEKVFKSYQALGGHRAS 181

Query: 174 HKKIKIHHNGSSDAAAAGGDAVVMDQRV-----FKCPFCDKVFDSGQALGGHKKIHFTYL 228
           HKK KI     ++    G D +   ++       +CP C KVF SGQALGGHK+ H    
Sbjct: 182 HKK-KI-----AETDQLGSDELKKKKKKSTSSHHECPICAKVFTSGQALGGHKRSH---- 231

Query: 229 ATPITKITSSAKSSG--AKFIDLNLPAPEDDSEVS 261
           A+   + T   + SG     IDLNLPAP ++ E++
Sbjct: 232 ASANNEFT---RRSGIIISLIDLNLPAPSEEEEMA 263

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SHD0|ZAT4_ARATH Zinc finger protein ZAT4 OS=Arabidopsis thaliana GN=ZAT4 PE=2 SV=1

 Score = 99.4 bits (246), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 140/312 (44%), Gaps = 69/312 (22%)

Query: 1   MGGHMRSHF----AKHPISSSNINPSPPKYPSS---------------SSSLSNMQTYRS 41
           +GGHMRSH     A+  + +        + PS                S    N +  R 
Sbjct: 19  LGGHMRSHMLTLSAERCVITGEAEEEVEERPSQLCDDDDDTESDASSSSGEFDNQKMNRL 78

Query: 42  VNNRPFSGLED---ESEAESSR-------------------NLTKARSKRPLRTI-ESVS 78
            +   F   ED   ESE ESSR                   +  K  + +P   + E   
Sbjct: 79  DDELEFDFAEDDDVESETESSRINPTRRRSKRTRKLGSFDFDFEKLTTSQPSELVAEPEH 138

Query: 79  NSVTENFLSDREVAMCLLKLSRDNWLQKDKQVVVAEAVVDEDEYVRGKSDDGDNDEEEDK 138
           +S   +  ++ ++A CL+ LSRD W Q+ K+              R + D+ D+D E   
Sbjct: 139 HSSASDTTTEEDLAFCLIMLSRDKWKQQKKKKQ------------RVEEDETDHDSE--- 183

Query: 139 EEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMD 198
             D  S  SR  ++KC+TC K F+SYQALGGH+ASHKK K      ++         V +
Sbjct: 184 --DYKSSKSR-GRFKCETCGKVFKSYQALGGHRASHKKNKACMT-KTEQVETEYVLGVKE 239

Query: 199 QRVFKCPFCDKVFDSGQALGGHKKIHFTYLA-------TPITKITSSAKSSGAKFIDLNL 251
           ++V +CP C +VF SGQALGGHK+ H + +        + I +I     S   + IDLNL
Sbjct: 240 KKVHECPICFRVFTSGQALGGHKRSHGSNIGAGRGLSVSQIVQIEEEV-SVKQRMIDLNL 298

Query: 252 PAPEDDSEVSQV 263
           PAP ++ E S V
Sbjct: 299 PAPNEEDETSLV 310

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SSW2|AZF2_ARATH Zinc finger protein AZF2 OS=Arabidopsis thaliana GN=AZF2 PE=2 SV=1

 Score = 78.6 bits (192), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 67/129 (51%), Gaps = 22/129 (17%)

Query: 147 SRTNKYKCKTCKKEFRSYQALGGHKASHK-KIKIHHNGSSDAAAAGGDAVVMDQ------ 199
           S+   YKC  C+K F SYQALGGHKASH+ K     + ++D + A   ++V  +      
Sbjct: 101 SKNLPYKCNVCEKAFPSYQALGGHKASHRIKPPTVISTTADDSTAPTISIVAGEKHPIAA 160

Query: 200 --RVFKCPFCDKVFDSGQALGGHKKIHF-------------TYLATPITKITSSAKSSGA 244
             ++ +C  C KVF +GQALGGHK+ H+             +   +     T S + S  
Sbjct: 161 SGKIHECSICHKVFPTGQALGGHKRCHYEGNLGGGGGGGSKSISHSGSVSSTVSEERSHR 220

Query: 245 KFIDLNLPA 253
            FIDLNLPA
Sbjct: 221 GFIDLNLPA 229

Transcriptional repressor involved in the inhibition of plant growth under abiotic stress conditions. Can repress the expression of various genes, including osmotic stress and abscisic acid-repressive genes and auxin-inducible genes, by binding to their promoter regions in a DNA sequence-specific manner. Acts as a negative regulator of abscisic acid (ABA) signaling during seed germination. Probably involved in jasmonate (JA) early signaling response. May regulate the expression of the JA biosynthesis gene LOX3 and control the expression of TIFY10A/JAZ1, a key repressor in the JA signaling cascade. May act as a positive regulator of leaf senescence. Has been identified as a suppressor of the deficiency of yeast snf4 mutant to grow on non-fermentable carbon source.

Arabidopsis thaliana (taxid: 3702)

>sp|Q681X4|ZAT5_ARATH Zinc finger protein ZAT5 OS=Arabidopsis thaliana GN=ZAT5 PE=2 SV=1

 Score = 77.4 bits (189), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 67/150 (44%), Gaps = 44/150 (29%)

Query: 152 YKCKTCKKEFRSYQALGGHKASHKKIKI------------------------HHNGSSDA 187
           Y+CKTC + F S+QALGGH+ASHKK +                         H   S  A
Sbjct: 115 YECKTCNRTFSSFQALGGHRASHKKPRTSTEEKTRLPLTQPKSSASEEGQNSHFKVSGSA 174

Query: 188 AAAGGDAVV-MDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT--PITKITSSAKSSGA 244
            A+    ++    +V +C  C   F SGQALGGH + H T + T  P+      +++S  
Sbjct: 175 LASQASNIINKANKVHECSICGSEFTSGQALGGHMRRHRTAVTTISPVAATAEVSRNSTE 234

Query: 245 KFI-----------------DLNLPAPEDD 257
           + I                 DLNLPAPEDD
Sbjct: 235 EEIEINIGRSMEQQRKYLPLDLNLPAPEDD 264

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LX85|ZAT8_ARATH Zinc finger protein ZAT8 OS=Arabidopsis thaliana GN=ZAT8 PE=2 SV=1

 Score = 71.2 bits (173), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 40/89 (44%), Positives = 51/89 (57%), Gaps = 6/89 (6%)

Query: 152 YKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAG--GDAVVMDQRVFKCPFCDK 209
           ++CKTC KEF S+QALGGH+ASHKK+      SSD +  G   +          CP C  
Sbjct: 37  FRCKTCLKEFSSFQALGGHRASHKKL----INSSDPSLLGSLSNKKTKTATSHPCPICGV 92

Query: 210 VFDSGQALGGHKKIHFTYLATPITKITSS 238
            F  GQALGGH + H +  A+P T +T S
Sbjct: 93  EFPMGQALGGHMRRHRSEKASPGTLVTRS 121

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q96289|ZAT10_ARATH Zinc finger protein ZAT10 OS=Arabidopsis thaliana GN=ZAT10 PE=2 SV=1

 Score = 70.9 bits (172), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 87/224 (38%), Gaps = 69/224 (30%)

Query: 50  LEDESEAESSRNLTKA-RSKRPLRTIESVSNSVTENFLSDREVAMCLLKLSRDNWLQKDK 108
            ED S      + TK  RSKR      S S+   +N   +  +A CL+ L+RDN     +
Sbjct: 19  FEDSSVFHGVEHWTKGKRSKR------SRSDFHHQNLTEEEYLAFCLMLLARDN-----R 67

Query: 109 QVVVAEAVVDEDEYVRGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALG 168
           Q     AV                                   YKC  C K F SYQALG
Sbjct: 68  QPPPPPAV-------------------------------EKLSYKCSVCDKTFSSYQALG 96

Query: 169 GHKASHKKIKIHHNGSSDAAAAGGD------------AVVMDQRVFKCPFCDKVFDSGQA 216
           GHKASH+K        S   + GGD                  +   C  C+K F SGQA
Sbjct: 97  GHKASHRK------NLSQTLSGGGDDHSTSSATTTSAVTTGSGKSHVCTICNKSFPSGQA 150

Query: 217 LGGHKKIHFTYLATPITKITSSAKSSGA--------KFIDLNLP 252
           LGGHK+ H+       T   S+++ +G+        +  DLN+P
Sbjct: 151 LGGHKRCHYEGNNNINTSSVSNSEGAGSTSHVSSSHRGFDLNIP 194

Transcriptional repressor involved in abiotic stress responses. Can repress the stress responsive genes DREB1A and LTI78. Probably involved in jasmonate (JA) early signaling response. May regulate the expression of the JA biosynthesis gene LOX3 and control the expression of TIFY10A/JAZ1, a key repressor in the JA signaling cascade.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SLD4|ZAT11_ARATH Zinc finger protein ZAT11 OS=Arabidopsis thaliana GN=ZAT11 PE=2 SV=1

 Score = 70.1 bits (170), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 63/123 (51%), Gaps = 17/123 (13%)

Query: 149 TNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCD 208
           +N+++CKTC K F S+QALGGH+ASHKK K+      D      D         KC  C 
Sbjct: 44  SNQFECKTCNKRFSSFQALGGHRASHKKPKLTVE-QKDVKHLSND--YKGNHFHKCSICS 100

Query: 209 KVFDSGQALGGHKKIHFTYL------------ATPITKITSSAKSSGAKFIDLNLPAPED 256
           + F +GQALGGH + H + +            + P+ K   S+K   +  +DLNL   E+
Sbjct: 101 QSFGTGQALGGHMRRHRSSMTVEPSFISPMIPSMPVLKRCGSSKRILS--LDLNLTPLEN 158

Query: 257 DSE 259
           D E
Sbjct: 159 DLE 161

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SSW0|AZF3_ARATH Zinc finger protein AZF3 OS=Arabidopsis thaliana GN=AZF3 PE=1 SV=1

 Score = 67.4 bits (163), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 49/89 (55%), Gaps = 7/89 (7%)

Query: 137 DKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVV 196
           D  + +S  V+    YKC  C K F SYQALGGHKASH+ +   + G  +  +    AV 
Sbjct: 60  DGGDLDSVTVAEKPSYKCGVCYKTFSSYQALGGHKASHRSL---YGGGENDKSTPSTAV- 115

Query: 197 MDQRVFKCPFCDKVFDSGQALGGHKKIHF 225
              +   C  C K F +GQALGGHK+ H+
Sbjct: 116 ---KSHVCSVCGKSFATGQALGGHKRCHY 141

Transcriptional repressor probably involved in abiotic stress responses. Binds DNA in a sequence-specific manner and can repress the transactivation activity of other transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|O65499|ZAT3_ARATH Zinc finger protein ZAT3 OS=Arabidopsis thaliana GN=ZAT3 PE=2 SV=1

 Score = 67.4 bits (163), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 70/145 (48%), Gaps = 28/145 (19%)

Query: 135 EEDKEEDESSLV--------SRTNKYKCKTCKKEFRSYQALGGHKASHKKIK-------I 179
           EED E     L+        S   +++C  CKK F S+QALGGH+ASHK +K       +
Sbjct: 137 EEDHEVASCLLMLSNGTPSSSSIERFECGGCKKVFGSHQALGGHRASHKNVKGCFAITNV 196

Query: 180 HHNGSSDAAAAGGD---AVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLATPITKIT 236
             +  + + ++G D    ++      KC  C +VF SGQALGGH + H+     P+    
Sbjct: 197 TDDPMTVSTSSGHDHQGKILTFSGHHKCNICFRVFSSGQALGGHMRCHWEKEEEPMI--- 253

Query: 237 SSAKSSGAKFIDLNLPAPEDDSEVS 261
                SGA  +DLN+P    D   S
Sbjct: 254 -----SGA--LDLNVPPTIQDLSTS 271

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	263
224139192	248	predicted protein [Populus trichocarpa]	0.809	0.858	0.401	2e-37
147815830	235	hypothetical protein VITISV_003575 [Viti	0.764	0.855	0.382	3e-33
255539815	284	zinc finger protein, putative [Ricinus c	0.410	0.380	0.638	5e-32
224129930	289	predicted protein [Populus trichocarpa]	0.821	0.747	0.313	8e-29
224063685	332	predicted protein [Populus trichocarpa]	0.916	0.725	0.326	3e-28
356496320	365	PREDICTED: zinc finger protein ZAT9-like	0.942	0.679	0.337	9e-28
358249138	388	uncharacterized protein LOC100780611 [Gl	0.961	0.652	0.319	2e-27
2346970	253	ZPT2-10 [Petunia x hybrida] gi|7959291|d	0.589	0.612	0.424	1e-26
63259079	309	Cys2/His2 zinc-finger transcription fact	0.893	0.760	0.336	2e-26
2346986	300	ZPT3-3 [Petunia x hybrida] gi|7959293|db	0.920	0.806	0.333	4e-26

>gi|224139192|ref|XP_002326791.1| predicted protein [Populus trichocarpa] gi|222834113|gb|EEE72590.1| predicted protein [Populus trichocarpa]

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/279 (40%), Positives = 149/279 (53%), Gaps = 66/279 (23%)

Query: 1   MGGHMRSHFAKHPISSSNINPSPPKYPSSSSSLSNMQTYRSVNNRPFSGLEDESEAESSR 60
           MGGHMRSH AK               P     +   +TY +    P        E ES+R
Sbjct: 20  MGGHMRSHLAK--------------LPLPPKPIPPQETYNTPKKSP-------PETESTR 58

Query: 61  NLTKARSKRPLRTIESVSNS---VTEN---------FLSDREVAMCLLKLSRDNWLQKDK 108
             T+ RSKR  ++ + V+ S   VTE+          L++ +VA+CLL LSRDNW +  K
Sbjct: 59  EPTRRRSKRSRKSADEVAESMVKVTESSEQVSSISYLLAEEDVALCLLMLSRDNWSEDAK 118

Query: 109 QVVVAEAVVDEDEYVRGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALG 168
           QV        +++Y+ G +                +      K+KC+TCKK FRSYQALG
Sbjct: 119 QV-------KKEDYLFGFT---------------RAKYKSQGKFKCETCKKGFRSYQALG 156

Query: 169 GHKASHKKIKIHH-NGSSDAAAAGGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTY 227
           GH+ASHKKIKIH  +   + +  G D   + +R+FKCPFC+KVFDSGQALGGHKK+HF+Y
Sbjct: 157 GHRASHKKIKIHEEHEEGNGSGCGEDNRSVGKRIFKCPFCEKVFDSGQALGGHKKVHFSY 216

Query: 228 LATPITKITSSAKSSGAKFIDLNLPAPE---DDSEVSQV 263
           L     KI+         F+DLN+PA E   DD EVS+ 
Sbjct: 217 LPVTNAKIS-------INFLDLNVPALEGTHDDGEVSEA 248

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147815830|emb|CAN72592.1| hypothetical protein VITISV_003575 [Vitis vinifera]

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/264 (38%), Positives = 143/264 (54%), Gaps = 63/264 (23%)

Query: 1   MGGHMRSHFAKHPISSSNINPSPPKYPSSSSSLSNMQTYRSVNNRPFSGLEDESEAESSR 60
           +GGHMRSH AK      +I P P K P +SS  +       V++      + ESE ++ +
Sbjct: 19  LGGHMRSHMAK-----LSIQPKPQK-PDNSSKFA-------VHD------DQESETDTPK 59

Query: 61  NLTKARSKRPLRTIESVSNSVTENFLSD------REVAMCLLKLSRDNWLQKDKQVVVAE 114
           N ++ RSKR  R+I   ++S   + +SD       + A  L+ LSR+ W           
Sbjct: 60  NQSRRRSKRACRSINKKADSPDSSVVSDVDDFSAEDAAQLLVLLSREKW----------- 108

Query: 115 AVVDEDEYVRGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASH 174
                    RGK    + D EE  +ED  +++     Y+C+TC K F+SYQALGGH+ASH
Sbjct: 109 --------TRGK----EVDNEEXMKEDNFTII-----YRCETCNKGFQSYQALGGHRASH 151

Query: 175 KKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLATPITK 234
           KK+KI  +    A + G      +QR FKCPFC KVF+SGQA+GGHKK+H +  A    +
Sbjct: 152 KKLKIESDEEDIAPSKG------NQRTFKCPFCFKVFESGQAMGGHKKVHMSTAAAAARR 205

Query: 235 ITSSAKSSGAKFIDLNLPAPEDDS 258
           ++      G  FIDLNLPAPE+D+
Sbjct: 206 VS----MPGQNFIDLNLPAPEEDN 225

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255539815|ref|XP_002510972.1| zinc finger protein, putative [Ricinus communis] gi|223550087|gb|EEF51574.1| zinc finger protein, putative [Ricinus communis]

 Score =  144 bits (362), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 76/119 (63%), Positives = 84/119 (70%), Gaps = 11/119 (9%)

Query: 151 KYKCKTCKKEFRSYQALGGHKASHKKIKIH------HNGSSDAAAAGGDAVVMDQRVFKC 204
           KYKCKTCKKEFRSYQALGGHKASHKKIK H          S +   G    V+D ++FKC
Sbjct: 156 KYKCKTCKKEFRSYQALGGHKASHKKIKTHVKVEHEEGSGSGSGVGGNCVTVVDHKMFKC 215

Query: 205 PFCDKVFDSGQALGGHKKIHFTYLATPITKITSSAKSSGAKFIDLNLPAPEDDSEVSQV 263
           PFCDK+FDSGQALGGHKK+HF+YL         SAKSS    +DLNLPAPEDD EVSQ 
Sbjct: 216 PFCDKMFDSGQALGGHKKVHFSYLGN----AKMSAKSS-HDLLDLNLPAPEDDGEVSQA 269

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224129930|ref|XP_002320706.1| predicted protein [Populus trichocarpa] gi|222861479|gb|EEE99021.1| predicted protein [Populus trichocarpa]

 Score =  133 bits (334), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 143/319 (44%), Gaps = 103/319 (32%)

Query: 1   MGGHMRSHFAKHPISSSNINPSPPKYPSSSSSLSNMQTYRSVNNRPFSGLED-ESEAESS 59
           +GGHMRSH  K P+        PPK         +++   +  +     L+D ESE ESS
Sbjct: 18  LGGHMRSHLLKLPV--------PPKL---EDQFPHIEFCFAAADAGSVVLQDRESETESS 66

Query: 60  RNLTKARSKRPLRTIE-------------------------------------------- 75
           +N T+ RSKR  R +E                                            
Sbjct: 67  KNPTRRRSKRTERLLENHHHQYHQQRPRQEQENNNIVKKLELKKMGTFKAAAESSSGQEP 126

Query: 76  ----SVSNSVTENFLSDREVAMCLLKLSRDNWLQKDKQVVVAEAVVDEDEYVRGKSDDGD 131
               S+S++ TE      +VA CL+ LSRD W +K+++                      
Sbjct: 127 EPVSSISDTTTEE-----DVAFCLMMLSRDRWKRKEQE---------------------- 159

Query: 132 NDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIH----HNGSSDA 187
            ++EED+  +E        +YKC+TC K F+SYQALGGH+ASHKK+K++           
Sbjct: 160 -NQEEDRGLEE--------EYKCETCNKVFKSYQALGGHRASHKKLKVYTPSKEPNLEPT 210

Query: 188 AAAGGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLATPITKITSSAKSSG---A 244
             AG    + ++++  CPFC +VF SGQALGGHK+ H   +A   +    S+   G    
Sbjct: 211 ENAGASTSLPEKKIHGCPFCLRVFSSGQALGGHKRSHVIGVAASSSTPARSSTKFGDNNL 270

Query: 245 KFIDLNLPAPEDDSEVSQV 263
             IDLNLPAP DD ++SQ 
Sbjct: 271 GLIDLNLPAPVDDDDISQA 289

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224063685|ref|XP_002301264.1| predicted protein [Populus trichocarpa] gi|222842990|gb|EEE80537.1| predicted protein [Populus trichocarpa]

 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 149/319 (46%), Gaps = 78/319 (24%)

Query: 1   MGGHMRSHFAKHPISSSNINPSPPKYPSSSSSLS-NMQ-TYRSVNNRPFSGLEDESEAES 58
           +GGHMRSH    PI        PPK       +  N + ++ +V+       + ESE ES
Sbjct: 19  LGGHMRSHMLNLPI--------PPKLEDQFPDIEVNPEFSFAAVDAGSVVLQDRESETES 70

Query: 59  SRNLTKARSKRPLRTIE------------------------------------------- 75
           S+N T+ RSKR    +E                                           
Sbjct: 71  SKNPTRRRSKRTKSLLEHHHQYHQQRPRQEQENNIIIKKLEFKKMGTIKAAAESSWGHEP 130

Query: 76  ----SVSNSVTENFLSDREVAMCLLKLSRDNWLQKDKQVVVAEAVVDEDEYVRGKSDDGD 131
               S+S + TE      +VA CL+ LSRD W +K+++    E  ++E+     ++DD D
Sbjct: 131 EPVSSISGTTTEE-----DVAFCLVMLSRDKWKRKEQENQEEEQELEEELAEA-ETDDSD 184

Query: 132 NDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSD----A 187
                   E +S       KYKC+TC K F+SYQALGGH+ASHKK+K++   +       
Sbjct: 185 --------EFKSCKTKTRGKYKCETCNKVFKSYQALGGHRASHKKLKVYTPSNEPKLERT 236

Query: 188 AAAGGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLATPITKITSSAKSSG---A 244
             AG    + +++  +CP+C +VF SGQALGGHK+ H   +A   +    S+   G    
Sbjct: 237 ENAGASTSLPEKKTHECPYCFRVFSSGQALGGHKRSHLIGVAASSSTPARSSTRIGDNNW 296

Query: 245 KFIDLNLPAPEDDSEVSQV 263
            FIDLNLPAP DD ++SQV
Sbjct: 297 GFIDLNLPAPVDDDDISQV 315

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496320|ref|XP_003517016.1| PREDICTED: zinc finger protein ZAT9-like [Glycine max]

 Score =  129 bits (325), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 110/326 (33%), Positives = 157/326 (48%), Gaps = 78/326 (23%)

Query: 1   MGGHMRSHFAKHPI--SSSNINPSPPKYPSSSSSLSNMQTYRSVNNRP------------ 46
           +GGHMRSH    P+    S   P    + + SS   +  ++  +   P            
Sbjct: 19  LGGHMRSHMLNLPVPPKQSEFVPIQLSFEADSSPSQSSSSFYGLRENPKKSFRFADPEFA 78

Query: 47  FSG-------LED-ESEAESSRNLTKARSKRPL--------------------------- 71
           F+        L+D ESE ESSRN T+ RSKR                             
Sbjct: 79  FAAADTGSVILQDRESETESSRNPTRTRSKRAWQLGGDGGGGGGGSGESEKKIMKVCKIS 138

Query: 72  RTIESVSNSVTENFLSDREVAMCLLKLSRDNWLQKDKQVVVAEAVVDEDEYVRGKSDDGD 131
           +T ES S SV++    + +VA CL+ LSRD W +++    +   + D D+      +D +
Sbjct: 139 KTNESAS-SVSDT-TREEDVAFCLMMLSRDKWKEEN----INNLLYDHDQDDDEDEEDDE 192

Query: 132 NDEEEDK----EEDESSLVSRTNK----YKCKTCKKEFRSYQALGGHKASHKKIKIHHNG 183
            DE  +     E +E SL    NK    YKC+TC+K FRSYQALGGH+ASHKKIK+++N 
Sbjct: 193 EDENNEDDDGYESEEKSLKKSNNKVRGRYKCETCEKVFRSYQALGGHRASHKKIKLNNNN 252

Query: 184 SSDAAAAGG---DAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLATPITKI----- 235
           +++    G      VV+++++ +CP C +VF SGQALGGHK+ H    +T  T +     
Sbjct: 253 NNNNNNEGELEVQHVVVEKKIHECPVCFRVFASGQALGGHKRTHVIGSSTAATTVSVRSS 312

Query: 236 -------TSSAKSSGAKFIDLNLPAP 254
                  T+S    G   IDLNLPAP
Sbjct: 313 VATVSVRTASTTRVGDSLIDLNLPAP 338

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358249138|ref|NP_001239999.1| uncharacterized protein LOC100780611 [Glycine max] gi|255641017|gb|ACU20788.1| unknown [Glycine max]

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 113/354 (31%), Positives = 162/354 (45%), Gaps = 101/354 (28%)

Query: 1   MGGHMRSHFAKHPI--SSSNINPSPPKYPSSSSSLSNMQTYRSVNNRP------------ 46
           +GGHMRSH    P+    S + P    + + SS   +  ++  +   P            
Sbjct: 19  LGGHMRSHMMNLPVPPKQSELVPIQLSFEAESSPSQSSSSFYGLRENPKKNFRFADPEFS 78

Query: 47  FSGLED--------ESEAESSRNLTKARSKRPLRTIE----------------------- 75
           F+  E         ESE ESSRN T+ RSKR  + +                        
Sbjct: 79  FAAAETSSVILQDRESETESSRNPTRRRSKRAWQQLGGDSGGGGVSDESEKKMMKVFDAV 138

Query: 76  ---------SVSNSVTENFLSDREVAMCLLKLSRDNW-----LQKDKQVVVAEAVVDEDE 121
                    SVS++ TE       VA CL+ LSRD W     L  D +V +AE   D D+
Sbjct: 139 NKNNNESASSVSDTTTEE-----AVAFCLMMLSRDKWKENNKLLYDNKVEIAEYNDDYDD 193

Query: 122 YVRGKSDDGDNDEEEDKEEDESSLVSRTNK----YKCKTCKKEFRSYQALGGHKASHKKI 177
                 ++ +++E  + EE+  S V ++NK    YKC+TC+K FRSYQALGGH+ASHKKI
Sbjct: 194 EEDEDEEEEEDEEIYESEEELKS-VKKSNKVRGRYKCETCEKVFRSYQALGGHRASHKKI 252

Query: 178 KIHHNGSSDAAAAGGD-----------AVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFT 226
           K+++  + +      +            VV+++++ +CP C +VF SGQALGGHK+ H  
Sbjct: 253 KLNNCENKNKNNNNNNDDEAEQLEVQHVVVVEKKIHECPVCFRVFASGQALGGHKRTHVI 312

Query: 227 ---------------------YLATPITKITSSAKSSGAKFIDLNLPAPEDDSE 259
                                 +AT   + TS+A+  G   IDLNLPAP DD E
Sbjct: 313 GSSTAAATTTATAITTVSVRNSVATVSVRTTSTARVVGDSLIDLNLPAPMDDDE 366

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|2346970|dbj|BAA21919.1| ZPT2-10 [Petunia x hybrida] gi|7959291|dbj|BAA96070.1| C2H2 zinc-finger protein ZPT2-10 [Petunia x hybrida]

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/186 (42%), Positives = 104/186 (55%), Gaps = 31/186 (16%)

Query: 88  DREVAMCLLKLSRDNWLQKDKQVVVAEAVVDEDEYVRGKSDDGDNDEEEDKEEDESSLVS 147
           D +VA CL+ LSRD W+ ++ +V+   A  DED                 K ED S +V 
Sbjct: 76  DEDVANCLMMLSRDKWMTQENEVIDNSASYDEDV----------------KTED-SVVVK 118

Query: 148 RTN------KYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRV 201
            T       KY C+TC K FRSYQALGGH+ASHKKIK+  N + +      ++ V   ++
Sbjct: 119 VTTTRRGRGKYICETCNKVFRSYQALGGHRASHKKIKVSINETKNNGNV--ESEVQKDKI 176

Query: 202 FKCPFCDKVFDSGQALGGHKKIH-FTYLATPI---TKITSSAKSSGAKFIDLNLPAPEDD 257
            +CP C +VF SGQALGGHK+ H     AT +   TKI SS  S     IDLN+PA  +D
Sbjct: 177 HECPVCYRVFSSGQALGGHKRSHGIGVAATNVSLSTKIVSSRIS--GTMIDLNIPATLED 234

Query: 258 SEVSQV 263
            E+SQ+
Sbjct: 235 DEISQI 240

Source: Petunia x hybrida

Species: Petunia x hybrida

Genus: Petunia

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|63259079|gb|AAY40249.1| Cys2/His2 zinc-finger transcription factor [Silene latifolia]

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/309 (33%), Positives = 144/309 (46%), Gaps = 74/309 (23%)

Query: 1   MGGHMRSHFAKHPISSSNINPSPPKYPSSS-SSLSNMQTYRSV-NNRPFSGLEDE-SEAE 57
           +GGHMRSH    P++        P+ P SS +S S  +    +  N     L+D  S+ E
Sbjct: 19  LGGHMRSHMMNMPVTRK------PELPVSSWTSESEPEEGEIIKGNSSSVTLQDRGSDTE 72

Query: 58  SSRNLTKAR-SKRPLRTIESV---------------------------SNSVTENFLSDR 89
           S++N+T+ R SKR  + + S+                           S+S++E   S+ 
Sbjct: 73  STKNVTRMRRSKRARKPVSSILLRNSHDYKLSWDSFDNYYNDVEQQTGSSSISE-VTSEE 131

Query: 90  EVAMCLLKLSRDNWLQKDKQVVVAEAVVDEDEYVRGKSDDGDNDEEEDKEEDESSLVSRT 149
           +VA CL+ +SRD W              +E  +  G        E+E +   E   +S  
Sbjct: 132 DVAFCLMMMSRDKWHG------------NEHGHRHGY-------EKEFRNNVEIEPISYK 172

Query: 150 NKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVM----DQRVFKCP 205
            KYKC TC K FRSYQALGGH+ASHKK ++      D        VV     ++++ KCP
Sbjct: 173 KKYKCDTCNKVFRSYQALGGHRASHKKTRV--TAPDDDHREKNRNVVATKEGEKKIHKCP 230

Query: 206 FCDKVFDSGQALGGHKKIHFT-------YLATPITKITSSAKSSGAKFIDLNLPAPEDDS 258
            C +VF SGQALGGHK+ H          +   I K+    K     FIDLNLPAP DD 
Sbjct: 231 ICFRVFASGQALGGHKRSHVIDNPIKSGKIIHQIPKMKMKTKIITENFIDLNLPAPIDDD 290

Query: 259 E----VSQV 263
           E    VSQ+
Sbjct: 291 EEEEIVSQI 299

Source: Silene latifolia

Species: Silene latifolia

Genus: Silene

Family: Caryophyllaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|2346986|dbj|BAA21927.1| ZPT3-3 [Petunia x hybrida] gi|7959293|dbj|BAA96071.1| C2H2 zinc-finger protein ZPT3-3 [Petunia x hybrida]

 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/279 (33%), Positives = 137/279 (49%), Gaps = 37/279 (13%)

Query: 1   MGGHMRSHFAKHPISSSNINPSPPKYPSSSSSLSNMQTYRSVNNRPFSGLEDESEAESSR 60
           +GGHMRSH     +    +         SSS  S        ++      + ESE ESSR
Sbjct: 20  LGGHMRSHMMNLYVQKQQMTDEMEYSIPSSSWSSGEVAAGDADDSGIVLPDKESETESSR 79

Query: 61  N--------------LTKARSKRPLRTIESVSNSVTENFLSDREVAMCLLKLSRDNWLQK 106
           N              + K +    L   E VS S++EN   + +VA CL+ LSRD W+++
Sbjct: 80  NQAPFRKSKRSRKSRIVKVKEYSSLVDTEPVS-SISENS-PEEDVAHCLMMLSRDKWIKQ 137

Query: 107 DKQVVVAEAVVDEDEYVRGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQA 166
           +      +   +E     G         E  K  + + +     KY+C+TC K FRSYQA
Sbjct: 138 EYDDYSDDDEEEEKSEDSG---------ELVKVTNSTKIKGSRGKYRCETCNKVFRSYQA 188

Query: 167 LGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFT 226
           LGGH+ASHKKIK+  + ++          V+++++ +CP C +VF SGQALGGHK+ H  
Sbjct: 189 LGGHRASHKKIKVSSSSTNQVEN------VVEEKIHECPVCFRVFSSGQALGGHKRTHVI 242

Query: 227 YLA----TPITKITSSAKSSGAKFIDLNLPAP-EDDSEV 260
             A     P+ +    +++ G+  IDLNLP P EDD E+
Sbjct: 243 GAAASVNVPVFEKPEFSRTGGS-LIDLNLPPPMEDDDEI 280

Source: Petunia x hybrida

Species: Petunia x hybrida

Genus: Petunia

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	263
TAIR|locus:2103311	288	AT3G60580 "AT3G60580" [Arabido	0.429	0.392	0.408	2.3e-27
TAIR|locus:2055583	314	AT2G45120 "AT2G45120" [Arabido	0.425	0.356	0.361	1.2e-22
TAIR|locus:2205649	267	AT1G02030 "AT1G02030" [Arabido	0.197	0.194	0.475	6.9e-19
TAIR|locus:2161168	304	AT5G61470 "AT5G61470" [Arabido	0.296	0.256	0.402	3.6e-14
TAIR|locus:2083053	215	AT3G49930 "AT3G49930" [Arabido	0.418	0.511	0.344	1.3e-12
TAIR|locus:2091201	273	ZF2 "AT3G19580" [Arabidopsis t	0.414	0.399	0.318	4.4e-12
TAIR|locus:2199246	227	STZ "AT1G27730" [Arabidopsis t	0.395	0.458	0.310	2.3e-11
TAIR|locus:2046153	286	AT2G28200 "AT2G28200" [Arabido	0.197	0.181	0.351	2.7e-11
TAIR|locus:2167766	193	ZF3 "AT5G43170" [Arabidopsis t	0.410	0.559	0.319	9.6e-10
TAIR|locus:2084046	175	AT3G53600 "AT3G53600" [Arabido	0.410	0.617	0.303	1.4e-09

TAIR|locus:2103311 AT3G60580 "AT3G60580" [Arabidopsis thaliana (taxid:3702)]

 Score = 207 (77.9 bits), Expect = 2.3e-27, Sum P(3) = 2.3e-27
 Identities = 47/115 (40%), Positives = 62/115 (53%)

Query:   151 KYKCKTCKKEFRSYQALGGXXXXXXXXXXXXNXXXXXXXXXXXXVVM-DQRVFKCPFCDK 209
             +YKC+TC K F+SYQALGG            N            VV+  +R+ +CP C +
Sbjct:   172 RYKCETCGKVFKSYQALGGHRASHKKNRVSNNKTEQRSETEYDNVVVVAKRIHECPICLR 231

Query:   210 VFDSGQALGGHKKIHFT-YLATPITKITSSAKSSGAKFIDLNLPAPEDDSEVSQV 263
             VF SGQALGGHK+ H    L+    +     +S   + IDLNLPAP ++ EVS V
Sbjct:   232 VFASGQALGGHKRSHGVGNLSVNQQRRVHRNESVKQRMIDLNLPAPTEEDEVSVV 286

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2055583 AT2G45120 "AT2G45120" [Arabidopsis thaliana (taxid:3702)]

 Score = 189 (71.6 bits), Expect = 1.2e-22, Sum P(3) = 1.2e-22
 Identities = 43/119 (36%), Positives = 61/119 (51%)

Query:   151 KYKCKTCKKEFRSYQALGGXXXXXXXXXXXXNXXXXXXXXXXXXVVMDQRVFKCPFCDKV 210
             ++KC+TC K F+SYQALGG                         V  +++V +CP C +V
Sbjct:   193 RFKCETCGKVFKSYQALGGHRASHKKNKACMTKTEQVETEYVLGV-KEKKVHECPICFRV 251

Query:   211 FDSGQALGGHKKIHFTYLAT----PITKITSSAKSSGAK--FIDLNLPAPEDDSEVSQV 263
             F SGQALGGHK+ H + +       +++I    +    K   IDLNLPAP ++ E S V
Sbjct:   252 FTSGQALGGHKRSHGSNIGAGRGLSVSQIVQIEEEVSVKQRMIDLNLPAPNEEDETSLV 310

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2205649 AT1G02030 "AT1G02030" [Arabidopsis thaliana (taxid:3702)]

 Score = 125 (49.1 bits), Expect = 6.9e-19, Sum P(4) = 6.9e-19
 Identities = 29/61 (47%), Positives = 38/61 (62%)

Query:   203 KCPFCDKVFDSGQALGGHKKIHFTYLATPITKITSSAKSSGA--KFIDLNLPAPEDDSEV 260
             +CP C KVF SGQALGGHK+ H    A+   + T   + SG     IDLNLPAP ++ E+
Sbjct:   210 ECPICAKVFTSGQALGGHKRSH----ASANNEFT---RRSGIIISLIDLNLPAPSEEEEM 262

Query:   261 S 261
             +
Sbjct:   263 A 263

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2161168 AT5G61470 "AT5G61470" [Arabidopsis thaliana (taxid:3702)]

 Score = 153 (58.9 bits), Expect = 3.6e-14, Sum P(2) = 3.6e-14
 Identities = 33/82 (40%), Positives = 45/82 (54%)

Query:   148 RTNKYKCKTCKKEFRSYQALGGXXXXXXXXXXXXNXXXXXXXXXXXXVVMDQRVFKCPFC 207
             + +KY C TC K  RSYQALGG            +            +V  +R ++C  C
Sbjct:   224 KQSKYTCDTCGKVLRSYQALGGHRTSHKYKRLKISDKNYFGEDGP--IV--RRQYECQIC 279

Query:   208 DKVFDSGQALGGHKKIHFTYLA 229
             +++F SGQALGGHKKIH+ +LA
Sbjct:   280 NRMFASGQALGGHKKIHYMFLA 301

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2083053 AT3G49930 "AT3G49930" [Arabidopsis thaliana (taxid:3702)]

 Score = 134 (52.2 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
 Identities = 42/122 (34%), Positives = 49/122 (40%)

Query:   143 SSLVSRTNKYKCKTCKKEFRSYQALGGXXXXX----XXXXXXXNXXXXXXXXXXXXVV-M 197
             S L      YKC  C K F SYQALGG                N            +V  
Sbjct:    85 SPLSDHQKDYKCSVCGKSFPSYQALGGHKTSHRKPVSVDVNNSNGTVTNNGNISNGLVGQ 144

Query:   198 DQRVFKCPFCDKVFDSGQALGGHKKIHFTYLATPITKITSSAKSSGAKFIDLNLPAPEDD 257
               +   C  C K F SGQALGGHK+ H+           S+  +S  KF DLNLPA +  
Sbjct:   145 SGKTHNCSICFKSFPSGQALGGHKRCHYDG-----GNGNSNGDNSH-KF-DLNLPADQVS 197

Query:   258 SE 259
              E
Sbjct:   198 DE 199

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA;TAS

TAIR|locus:2091201 ZF2 "AT3G19580" [Arabidopsis thaliana (taxid:3702)]

 Score = 137 (53.3 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
 Identities = 42/132 (31%), Positives = 56/132 (42%)

Query:   147 SRTNKYKCKTCKKEFRSYQALGGXXXXXXXXX-XXXNXXXXXXXXXXXXVVMDQR----- 200
             S+   YKC  C+K F SYQALGG             +            +V  ++     
Sbjct:   101 SKNLPYKCNVCEKAFPSYQALGGHKASHRIKPPTVISTTADDSTAPTISIVAGEKHPIAA 160

Query:   201 ---VFKCPFCDKVFDSGQALGGHKKIHF-------------TYLATPITKITSSAKSSGA 244
                + +C  C KVF +GQALGGHK+ H+             +   +     T S + S  
Sbjct:   161 SGKIHECSICHKVFPTGQALGGHKRCHYEGNLGGGGGGGSKSISHSGSVSSTVSEERSHR 220

Query:   245 KFIDLNLPA-PE 255
              FIDLNLPA PE
Sbjct:   221 GFIDLNLPALPE 232

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM;ISS;IDA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003677 "DNA binding" evidence=ISS

GO:0009414 "response to water deprivation" evidence=IEP;RCA

GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA

GO:0009793 "embryo development ending in seed dormancy" evidence=IEP

GO:0042538 "hyperosmotic salinity response" evidence=IEP;RCA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

TAIR|locus:2199246 STZ "AT1G27730" [Arabidopsis thaliana (taxid:3702)]

 Score = 131 (51.2 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
 Identities = 37/119 (31%), Positives = 49/119 (41%)

Query:   152 YKCKTCKKEFRSYQALGGXXXX-----XXXXXXXXNXXXXXXXXXXXXVVMDQ-RVFKCP 205
             YKC  C K F SYQALGG                 +            V     +   C 
Sbjct:    80 YKCSVCDKTFSSYQALGGHKASHRKNLSQTLSGGGDDHSTSSATTTSAVTTGSGKSHVCT 139

Query:   206 FCDKVFDSGQALGGHKKIHFTYLATPITKITSSAKSSGA--------KFIDLNLPA-PE 255
              C+K F SGQALGGHK+ H+       T   S+++ +G+        +  DLN+P  PE
Sbjct:   140 ICNKSFPSGQALGGHKRCHYEGNNNINTSSVSNSEGAGSTSHVSSSHRGFDLNIPPIPE 198

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009409 "response to cold" evidence=IEP

GO:0009414 "response to water deprivation" evidence=IEP;RCA;IMP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA

GO:0035264 "multicellular organism growth" evidence=IMP

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0009611 "response to wounding" evidence=IEP;RCA

GO:0006979 "response to oxidative stress" evidence=RCA;IMP

GO:0009644 "response to high light intensity" evidence=IEP

GO:0010117 "photoprotection" evidence=IMP

GO:0015979 "photosynthesis" evidence=IMP

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009612 "response to mechanical stimulus" evidence=RCA

GO:0009620 "response to fungus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009873 "ethylene mediated signaling pathway" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0009651 "response to salt stress" evidence=IGI;IEP

TAIR|locus:2046153 AT2G28200 "AT2G28200" [Arabidopsis thaliana (taxid:3702)]

 Score = 94 (38.1 bits), Expect = 2.7e-11, Sum P(4) = 2.7e-11
 Identities = 19/54 (35%), Positives = 31/54 (57%)

Query:   200 RVFKCPFCDKVFDSGQALGGHKKIHFTYLAT--PITKITSSAKSSGAKFIDLNL 251
             +V +C  C   F SGQALGGH + H T + T  P+      +++S  + I++N+
Sbjct:   188 KVHECSICGSEFTSGQALGGHMRRHRTAVTTISPVAATAEVSRNSTEEEIEINI 241

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016926 "protein desumoylation" evidence=RCA

GO:0048573 "photoperiodism, flowering" evidence=RCA

GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA

TAIR|locus:2167766 ZF3 "AT5G43170" [Arabidopsis thaliana (taxid:3702)]

 Score = 127 (49.8 bits), Expect = 9.6e-10, Sum P(2) = 9.6e-10
 Identities = 39/122 (31%), Positives = 50/122 (40%)

Query:   143 SSLVSRTNKYKCKTCKKEFRSYQALGGXXXXXXXXXXXXNXXXXXXXXXXXXVVMDQRVF 202
             S  V+    YKC  C K F SYQALGG                          V      
Sbjct:    66 SVTVAEKPSYKCGVCYKTFSSYQALGGHKASHRSLYGGGENDKSTPSTAVKSHV------ 119

Query:   203 KCPFCDKVFDSGQALGGHKKIHFTYLATPITKI--TSSAKSSGAKFIDLNL-P----APE 255
              C  C K F +GQALGGHK+ H+    +    +  TS   SS  +  DLN+ P    +P+
Sbjct:   120 -CSVCGKSFATGQALGGHKRCHYDGGVSNSEGVGSTSHVSSSSHRGFDLNIIPVQGFSPD 178

Query:   256 DD 257
             D+
Sbjct:   179 DE 180

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;ISS;IDA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003677 "DNA binding" evidence=ISS

GO:0009409 "response to cold" evidence=IEP

GO:0042538 "hyperosmotic salinity response" evidence=IEP

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0010200 "response to chitin" evidence=IEP

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2084046 AT3G53600 "AT3G53600" [Arabidopsis thaliana (taxid:3702)]

 Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 37/122 (30%), Positives = 57/122 (46%)

Query:   144 SLVSRTNKYKCKTCKKEFRSYQALGGXXXXXXXXXXXXNXXXXXXXXXXXXVVMDQRVFK 203
             S  +  N ++CKTC ++F S+QALGG            +               +  + K
Sbjct:    41 SKTNHNNHFECKTCNRKFDSFQALGGHRASHKKPKLIVDQEQVKHRNK------ENDMHK 94

Query:   204 CPFCDKVFDSGQALGGHKKIHFTYLATPITKITS--------SAKSSGAKFIDLNLPAPE 255
             C  CD++F +GQALGGH + H T + T  + + S        +  SS  + +DLNL   E
Sbjct:    95 CTICDQMFGTGQALGGHMRKHRTSMITEQSIVPSVVYSRPVFNRCSSSKEILDLNLTPLE 154

Query:   256 DD 257
             +D
Sbjct:   155 ND 156

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9M202	ZAT9_ARATH	No assigned EC number	0.3220	0.8973	0.8194	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	263
pfam13912	27	pfam13912, zf-C2H2_6, C2H2-type zinc finger	9e-08
pfam13912	27	pfam13912, zf-C2H2_6, C2H2-type zinc finger	1e-05

>gnl|CDD|206083 pfam13912, zf-C2H2_6, C2H2-type zinc finger

 Score = 46.8 bits (112), Expect = 9e-08
 Identities = 14/25 (56%), Positives = 15/25 (60%)

Query: 152 YKCKTCKKEFRSYQALGGHKASHKK 176
           + C  C K F S QALGGHK SH  
Sbjct: 2   HTCGVCGKTFSSLQALGGHKKSHCS 26

Length = 27

>gnl|CDD|206083 pfam13912, zf-C2H2_6, C2H2-type zinc finger

 Score = 40.7 bits (96), Expect = 1e-05
 Identities = 15/24 (62%), Positives = 15/24 (62%)

Query: 201 VFKCPFCDKVFDSGQALGGHKKIH 224
           V  C  C K F S QALGGHKK H
Sbjct: 1   VHTCGVCGKTFSSLQALGGHKKSH 24

Length = 27

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	263
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.76
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.73
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.39
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.34
KOG3576	267	consensus Ovo and related transcription factors [T	99.22
KOG3576	267	consensus Ovo and related transcription factors [T	99.17
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.0
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	98.97
PHA02768	55	hypothetical protein; Provisional	98.69
KOG3608	467	consensus Zn finger proteins [General function pre	98.68
KOG3608	467	consensus Zn finger proteins [General function pre	98.57
PLN03086	567	PRLI-interacting factor K; Provisional	98.48
PHA00733	128	hypothetical protein	98.46
KOG3993	500	consensus Transcription factor (contains Zn finger	98.27
PHA02768	55	hypothetical protein; Provisional	98.21
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.13
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.06
PHA00732	79	hypothetical protein	97.96
PHA00616	44	hypothetical protein	97.91
PLN03086	567	PRLI-interacting factor K; Provisional	97.86
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.79
PHA00616	44	hypothetical protein	97.73
PHA00733	128	hypothetical protein	97.66
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.59
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.5
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.26
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.24
KOG3993	500	consensus Transcription factor (contains Zn finger	97.12
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.06
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.0
smart00355	26	ZnF_C2H2 zinc finger.	96.89
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	96.85
PHA00732	79	hypothetical protein	96.82
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	96.5
smart00355	26	ZnF_C2H2 zinc finger.	95.97
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.69
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	95.57
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	94.97
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	94.96
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	94.66
PRK04860	160	hypothetical protein; Provisional	94.62
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	94.28
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	94.1
KOG1146	1406	consensus Homeobox protein [General function predi	94.05
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	93.23
KOG2893	341	consensus Zn finger protein [General function pred	93.09
PRK04860	160	hypothetical protein; Provisional	93.03
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	92.93
COG5189	423	SFP1 Putative transcriptional repressor regulating	92.84
COG5048	467	FOG: Zn-finger [General function prediction only]	92.36
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	91.59
KOG2893	341	consensus Zn finger protein [General function pred	90.35
COG5048	467	FOG: Zn-finger [General function prediction only]	89.65
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	89.15
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	88.52
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	87.77
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	82.26
KOG1146	1406	consensus Homeobox protein [General function predi	82.14

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.76  E-value=4.8e-19  Score=153.30  Aligned_cols=106  Identities=21%  Similarity=0.296  Sum_probs=87.0

Q ss_pred             CccccCCCCCCCcccccchhhhhcccC---CCCccccCcccccccChhhhhhhhhhcCCCcccccCCCCcccc------c
Q 038614          121 EYVRGKSDDGDNDEEEDKEEDESSLVS---RTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAA------G  191 (263)
Q Consensus       121 ~~~~~c~~c~~~~~~~~~~~~h~~~h~---~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~------~  191 (263)
                      ...+.|.+||+.+.....|.+|...|-   ..+.+.|..|+|+|.+..+|..|+++|+  -++.|.+|++.|.      .
T Consensus       128 ~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQG  205 (279)
T KOG2462|consen  128 HPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQG  205 (279)
T ss_pred             CCceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhc
Confidence            345688889998888888888887763   3677889999999999999999988888  4577888888762      3


Q ss_pred             ccccccCCcceecCccccccCCchhhhhHhhhhcCCC
Q 038614          192 GDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYL  228 (263)
Q Consensus       192 h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  228 (263)
                      |+|+|||||||.|+.|+|+|...++|+.|+++|.+-.
T Consensus       206 HiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K  242 (279)
T KOG2462|consen  206 HIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVK  242 (279)
T ss_pred             ccccccCCCCccCCcccchhcchHHHHHHHHhhcCCc
Confidence            8888999999999999999999999999999988754

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.73  E-value=6.5e-19  Score=152.50  Aligned_cols=127  Identities=19%  Similarity=0.158  Sum_probs=106.2

Q ss_pred             HHHHHHhhcccccccccccccccceeeccCCccccCCCCCCCcccccchhhhhcccCCCCccccCcccccccChhhhhhh
Q 038614           91 VAMCLLKLSRDNWLQKDKQVVVAEAVVDEDEYVRGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGH  170 (263)
Q Consensus        91 ~a~cl~mlsr~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H  170 (263)
                      +..|..+++...-|....+   .+ ........+.|..|++.+.....|..|+++|+  -+++|.+|||.|....-|.+|
T Consensus       133 c~eCgk~ysT~snLsrHkQ---~H-~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGH  206 (279)
T KOG2462|consen  133 CPECGKSYSTSSNLSRHKQ---TH-RSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGH  206 (279)
T ss_pred             ccccccccccccccchhhc---cc-ccccccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhcc
Confidence            3347777777776653321   11 22233567899999999999999999999988  789999999999999999999


Q ss_pred             hhhcCCCcccccCCCCccc-----cc-ccccccCCcceecCccccccCCchhhhhHhhh
Q 038614          171 KASHKKIKIHHNGSSDAAA-----AG-GDAVVMDQRVFKCPFCDKVFDSGQALGGHKKI  223 (263)
Q Consensus       171 ~~~H~~~kp~~~~~~~~~~-----~~-h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~  223 (263)
                      +|+|+|||||.|.-|++.|     ++ |+++|.+.|.|+|..|+|.|...+-|.+|.-.
T Consensus       207 iRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  207 IRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             cccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhh
Confidence            9999999999988887766     33 99999999999999999999999999999754

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.39  E-value=5.9e-14  Score=136.39  Aligned_cols=54  Identities=11%  Similarity=0.150  Sum_probs=50.5

Q ss_pred             ccccCCCCCCCcccccchhhhhcccCCCCccccCcccccccChhhhhhhhhhcC
Q 038614          122 YVRGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHK  175 (263)
Q Consensus       122 ~~~~c~~c~~~~~~~~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~  175 (263)
                      ...+|-.|.+.|...+.|+.|.+.|++++||+|.+||..|..+.+|+.|...|+
T Consensus       352 ~khkCr~CakvfgS~SaLqiHlRSHTGERPfqCnvCG~~FSTkGNLKvH~~rH~  405 (958)
T KOG1074|consen  352 FKHKCRFCAKVFGSDSALQIHLRSHTGERPFQCNVCGNRFSTKGNLKVHFQRHR  405 (958)
T ss_pred             ccchhhhhHhhcCchhhhhhhhhccCCCCCeeecccccccccccceeeeeeecc
Confidence            345899999999999999999999999999999999999999999999987776

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.34  E-value=9.3e-14  Score=133.16  Aligned_cols=77  Identities=21%  Similarity=0.378  Sum_probs=50.5

Q ss_pred             CCccccCcccccccChhhhhhhhhhcCCCcccccCCCCccc------ccccccccCCcceecCccccccCCchhhhhHhh
Q 038614          149 TNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAA------AGGDAVVMDQRVFKCPFCDKVFDSGQALGGHKK  222 (263)
Q Consensus       149 ~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~------~~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r  222 (263)
                      ...|.|+.|+|+|...+.|.+|+--|+|.+||+|..|.+.|      ..|.|+|.|+|||.|..|+|+|........||.
T Consensus       892 ~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSYSQHMN  971 (1007)
T KOG3623|consen  892 DGMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSYSQHMN  971 (1007)
T ss_pred             cccchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccchHhhhc
Confidence            34455555555555555555555555555555555554444      124555668899999999999999999999997


Q ss_pred             hhc
Q 038614          223 IHF  225 (263)
Q Consensus       223 ~H~  225 (263)
                      --+
T Consensus       972 HRY  974 (1007)
T KOG3623|consen  972 HRY  974 (1007)
T ss_pred             cch
Confidence            544

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.22  E-value=1.3e-12  Score=108.85  Aligned_cols=110  Identities=15%  Similarity=0.148  Sum_probs=87.2

Q ss_pred             CCccccCCCCCCCcccccchhhhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccCCCCccccc------cc
Q 038614          120 DEYVRGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAG------GD  193 (263)
Q Consensus       120 ~~~~~~c~~c~~~~~~~~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~------h~  193 (263)
                      +...+.|..|++.|.-..-|.+|++-|..-+.|.|..|||.|...-.|++|.++|+|.+||+|..|.+.|.+      |.
T Consensus       114 d~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl  193 (267)
T KOG3576|consen  114 DQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHL  193 (267)
T ss_pred             CCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHH
Confidence            345678888999988877788888888888889999999999988889999999999999988888877632      32


Q ss_pred             c-ccc----------CCcceecCccccccCCchhhhhHhhhhcCCCC
Q 038614          194 A-VVM----------DQRVFKCPFCDKVFDSGQALGGHKKIHFTYLA  229 (263)
Q Consensus       194 ~-~h~----------g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  229 (263)
                      + +|.          ..|.|.|..||.+-.....+..|.+.|....+
T Consensus       194 ~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~Sp  240 (267)
T KOG3576|consen  194 KKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSP  240 (267)
T ss_pred             HHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCCH
Confidence            1 121          25678999999888888888888888876543

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.17  E-value=3.6e-12  Score=106.16  Aligned_cols=79  Identities=24%  Similarity=0.456  Sum_probs=71.8

Q ss_pred             CCCccccCcccccccChhhhhhhhhhcCCCcccccCCCCccc------ccccccccCCcceecCccccccCCchhhhhHh
Q 038614          148 RTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAA------AGGDAVVMDQRVFKCPFCDKVFDSGQALGGHK  221 (263)
Q Consensus       148 ~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~------~~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~  221 (263)
                      ....|.|.+|+|.|.....|.+|++.|...|.|.|.||++.|      .+|.|+|+|-+||+|..|+|+|.+...|..|.
T Consensus       114 d~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl  193 (267)
T KOG3576|consen  114 DQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHL  193 (267)
T ss_pred             CCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHH
Confidence            455799999999999999999999999999999999999876      46999999999999999999999999999997


Q ss_pred             h-hhcC
Q 038614          222 K-IHFT  226 (263)
Q Consensus       222 r-~H~~  226 (263)
                      + +|..
T Consensus       194 ~kvhgv  199 (267)
T KOG3576|consen  194 KKVHGV  199 (267)
T ss_pred             HHHcCc
Confidence            5 5643

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.00  E-value=7.8e-11  Score=114.97  Aligned_cols=88  Identities=22%  Similarity=0.274  Sum_probs=78.7

Q ss_pred             ccccCCCCCCCcccccchhhhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccCCCCcccccccccccCCcc
Q 038614          122 YVRGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRV  201 (263)
Q Consensus       122 ~~~~c~~c~~~~~~~~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h~g~kp  201 (263)
                      .+-+|-.|-+.....+.|+.|.++|+|++||+|.+||+.|..+.+|+.|+-+|+..-+++                  -+
T Consensus       604 dPNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R------------------~q  665 (958)
T KOG1074|consen  604 DPNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPAR------------------VQ  665 (958)
T ss_pred             CccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCcccc------------------cc
Confidence            344799999999999999999999999999999999999999999999999998654332                  47


Q ss_pred             eecC---ccccccCCchhhhhHhhhhcCC
Q 038614          202 FKCP---FCDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       202 ~~C~---~Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      |.|+   +|.+.|..+-.|..|+|+|.++
T Consensus       666 ~ScP~~~ic~~kftn~V~lpQhIriH~~~  694 (958)
T KOG1074|consen  666 FSCPSTFICQKKFTNAVTLPQHIRIHLGG  694 (958)
T ss_pred             ccCCchhhhcccccccccccceEEeecCC
Confidence            8999   9999999999999999999965

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=98.97  E-value=1.1e-10  Score=112.34  Aligned_cols=98  Identities=15%  Similarity=0.218  Sum_probs=62.2

Q ss_pred             ccCCCCCCCcccccchhhhhcc---cCCCCccccCcccccccChhhhhhhhhhcCCC-------------cccccCCCCc
Q 038614          124 RGKSDDGDNDEEEDKEEDESSL---VSRTNKYKCKTCKKEFRSYQALGGHKASHKKI-------------KIHHNGSSDA  187 (263)
Q Consensus       124 ~~c~~c~~~~~~~~~~~~h~~~---h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~-------------kp~~~~~~~~  187 (263)
                      ..|..|...+.....++.|++.   .... .|.|..|..+|.+...|.+|+.+|...             +-|+|..|++
T Consensus       211 ltcpycdrgykrltslkeHikyrhekne~-nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgK  289 (1007)
T KOG3623|consen  211 LTCPYCDRGYKRLTSLKEHIKYRHEKNEP-NFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGK  289 (1007)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHhhCCC-CCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccch
Confidence            3566666555555455554422   1222 255666666666666666666666532             2234666666


Q ss_pred             cc------ccccccccCCcceecCccccccCCchhhhhHhh
Q 038614          188 AA------AGGDAVVMDQRVFKCPFCDKVFDSGQALGGHKK  222 (263)
Q Consensus       188 ~~------~~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r  222 (263)
                      .|      ..|.|+|.|+|||+|+.|+|+|........||-
T Consensus       290 AFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmS  330 (1007)
T KOG3623|consen  290 AFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMS  330 (1007)
T ss_pred             hhhhHHHHHhhheeecCCCCcCCcccccccccCCccccccc
Confidence            55      125667778999999999999999999999974

>PHA02768 hypothetical protein; Provisional

Probab=98.69  E-value=6.5e-09  Score=69.49  Aligned_cols=44  Identities=16%  Similarity=0.311  Sum_probs=38.5

Q ss_pred             ccccCcccccccChhhhhhhhhhcCCCcccccCCCCcccccccccccCCcceecCccccccCCchhhh
Q 038614          151 KYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVFDSGQALG  218 (263)
Q Consensus       151 p~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~~Cgk~F~~~~~L~  218 (263)
                      -|+|+.|||.|...++|..|+++|+                        ++|+|..|++.|...+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~------------------------k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN------------------------TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC------------------------CcccCCcccceecccceeE
Confidence            3899999999999999999999886                        4778999999998877663

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=98.68  E-value=9e-09  Score=92.33  Aligned_cols=129  Identities=16%  Similarity=0.241  Sum_probs=100.6

Q ss_pred             CHHHHHHHHHhhcccccccccccccccceeeccCCccccCCCCCCCcccccchhhhhcc-cCCCCccccCcccccccChh
Q 038614           87 SDREVAMCLLKLSRDNWLQKDKQVVVAEAVVDEDEYVRGKSDDGDNDEEEDKEEDESSL-VSRTNKYKCKTCKKEFRSYQ  165 (263)
Q Consensus        87 ~ee~~a~cl~mlsr~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~~~~h~~~-h~~~kp~kC~~C~k~F~s~~  165 (263)
                      .....+.|...|+.+..+....    ...+     ..++|..|+......+.|..|++. |...|||+|..|.+.|....
T Consensus       236 n~fqC~~C~KrFaTeklL~~Hv----~rHv-----n~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~es  306 (467)
T KOG3608|consen  236 NSFQCAQCFKRFATEKLLKSHV----VRHV-----NCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRES  306 (467)
T ss_pred             CchHHHHHHHHHhHHHHHHHHH----HHhh-----hcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHH
Confidence            4567788888888888887332    1111     346899999999988899999864 77889999999999999999


Q ss_pred             hhhhhhhhcCCCcccccCC--CCccc------ccccc-cccC--CcceecCccccccCCchhhhhHhhh-hc
Q 038614          166 ALGGHKASHKKIKIHHNGS--SDAAA------AGGDA-VVMD--QRVFKCPFCDKVFDSGQALGGHKKI-HF  225 (263)
Q Consensus       166 ~L~~H~~~H~~~kp~~~~~--~~~~~------~~h~~-~h~g--~kp~~C~~Cgk~F~~~~~L~~H~r~-H~  225 (263)
                      .|..|..+|. +-.|.|.+  |..++      .+|.+ .|.|  +-+|.|..|.+.|.++.+|..|++. |.
T Consensus       307 dL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~  377 (467)
T KOG3608|consen  307 DLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLMKKHG  377 (467)
T ss_pred             HHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhccchhHHHHHHHhhc
Confidence            9999999999 55688877  55443      23554 3445  4579999999999999999999754 44

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=98.57  E-value=8.8e-09  Score=92.41  Aligned_cols=112  Identities=21%  Similarity=0.247  Sum_probs=78.1

Q ss_pred             cceeeccCCccccCCCCCCCcccccchhhhhcccC--CCCccccCcccccccChhhhhhhhhhcCCCcccccCCCCcc--
Q 038614          113 AEAVVDEDEYVRGKSDDGDNDEEEDKEEDESSLVS--RTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAA--  188 (263)
Q Consensus       113 ~~~~~~~~~~~~~c~~c~~~~~~~~~~~~h~~~h~--~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~--  188 (263)
                      .+...+.+++..-|..||.-|.....+-.|.+-.+  ...+|+|..|.|.|.....|..|+..|-.  -|+|..|+-.  
T Consensus       197 eH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn--~ykCplCdmtc~  274 (467)
T KOG3608|consen  197 EHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVN--CYKCPLCDMTCS  274 (467)
T ss_pred             HHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhh--cccccccccCCC
Confidence            34445566666777777777777766666654333  33477888888888888888888777754  3556665532  


Q ss_pred             ----ccccccc-ccCCcceecCccccccCCchhhhhHhhhhcC
Q 038614          189 ----AAGGDAV-VMDQRVFKCPFCDKVFDSGQALGGHKKIHFT  226 (263)
Q Consensus       189 ----~~~h~~~-h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~  226 (263)
                          ..+|++. |...|||+|..|.+.|...+.|.+|..+|..
T Consensus       275 ~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS~  317 (467)
T KOG3608|consen  275 SASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHSK  317 (467)
T ss_pred             ChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhccc
Confidence                2346553 6678899999999999999999999888874

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.48  E-value=1.1e-07  Score=91.73  Aligned_cols=92  Identities=12%  Similarity=0.197  Sum_probs=69.2

Q ss_pred             cccCCCCCCCcccccchhhhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccCCCCcccc------------
Q 038614          123 VRGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAA------------  190 (263)
Q Consensus       123 ~~~c~~c~~~~~~~~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~------------  190 (263)
                      .+.|..|++.|. ...+..|..+++  ++|.|. ||+.| ....|..|+++|...+++.|.||...+.            
T Consensus       453 H~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~  527 (567)
T PLN03086        453 HVHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRL  527 (567)
T ss_pred             CccCCCCCCccc-hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhh
Confidence            347889988885 466788888774  789998 98755 5688899999999999999999886542            


Q ss_pred             ----cccccccCCcceecCccccccCCchhhhhHh
Q 038614          191 ----GGDAVVMDQRVFKCPFCDKVFDSGQALGGHK  221 (263)
Q Consensus       191 ----~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~  221 (263)
                          .|... .|.+++.|..||+.|... .|..|+
T Consensus       528 s~Lt~HE~~-CG~rt~~C~~Cgk~Vrlr-dm~~H~  560 (567)
T PLN03086        528 RGMSEHESI-CGSRTAPCDSCGRSVMLK-EMDIHQ  560 (567)
T ss_pred             hhHHHHHHh-cCCcceEccccCCeeeeh-hHHHHH
Confidence                24443 478899999999888664 445554

>PHA00733 hypothetical protein

Probab=98.46  E-value=8.8e-08  Score=75.96  Aligned_cols=55  Identities=24%  Similarity=0.388  Sum_probs=44.4

Q ss_pred             CCCccccCcccccccChhhhhhhhhhcCCCcccccCCCCcccccccccccCCcceecCccccccCCchhhhhHhhhhcC
Q 038614          148 RTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFT  226 (263)
Q Consensus       148 ~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~  226 (263)
                      +.+||.|..|++.|.+...|..|++.|.                        .+|.|..|++.|.....|..|++...+
T Consensus        70 ~~kPy~C~~Cgk~Fss~s~L~~H~r~h~------------------------~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         70 AVSPYVCPLCLMPFSSSVSLKQHIRYTE------------------------HSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CCCCccCCCCCCcCCCHHHHHHHHhcCC------------------------cCccCCCCCCccCCHHHHHHHHHHhcC
Confidence            4678888888888888888877766542                        368999999999999999999887543

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=98.27  E-value=1.2e-07  Score=86.98  Aligned_cols=104  Identities=18%  Similarity=0.202  Sum_probs=73.5

Q ss_pred             cccCCCCCCCcccccchhhhhcccCCCCccccCcccccccChhhhhhhhhhcCCCccccc--------CCCCccccc-cc
Q 038614          123 VRGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHN--------GSSDAAAAG-GD  193 (263)
Q Consensus       123 ~~~c~~c~~~~~~~~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~--------~~~~~~~~~-h~  193 (263)
                      .|.|..|-..+++.-.|..|.-.....--|+|..|+|+|.-..+|..|+|.|+-..-...        ........+ -.
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~  346 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAE  346 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhcc
Confidence            467999999998887788886444444569999999999999999999999985432211        000000000 01


Q ss_pred             ccc--cCCcceecCccccccCCchhhhhHhhhhcC
Q 038614          194 AVV--MDQRVFKCPFCDKVFDSGQALGGHKKIHFT  226 (263)
Q Consensus       194 ~~h--~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~  226 (263)
                      +..  ..+-.|.|.+|+|.|.....|+.|+.+|..
T Consensus       347 rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~  381 (500)
T KOG3993|consen  347 RSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQR  381 (500)
T ss_pred             ccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhc
Confidence            111  113489999999999999999999988874

>PHA02768 hypothetical protein; Provisional

Probab=98.21  E-value=4.1e-07  Score=60.87  Aligned_cols=44  Identities=9%  Similarity=-0.101  Sum_probs=40.2

Q ss_pred             ccCCCCCCCcccccchhhhhcccCCCCccccCcccccccChhhhhh
Q 038614          124 RGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGG  169 (263)
Q Consensus       124 ~~c~~c~~~~~~~~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~  169 (263)
                      |.|++||+.|...+.|..|+++|+  ++|+|..|++.|.+.+.|..
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~~   49 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYIE   49 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeEE
Confidence            589999999999999999999999  79999999999998877653

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.13  E-value=4.2e-07  Score=51.81  Aligned_cols=23  Identities=26%  Similarity=0.707  Sum_probs=18.4

Q ss_pred             cccccccCCcceecCccccccCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDS  213 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~  213 (263)
                      +|+++|+|+|||.|++|++.|.+
T Consensus         4 ~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    4 RHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHSSSSSEEESSSSEEESS
T ss_pred             HHhhhcCCCCCCCCCCCcCeeCc
Confidence            45566668899999999999964

...

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.06  E-value=1.1e-06  Score=49.97  Aligned_cols=25  Identities=24%  Similarity=0.466  Sum_probs=22.1

Q ss_pred             hhhhhcccCCCCccccCcccccccC
Q 038614          139 EEDESSLVSRTNKYKCKTCKKEFRS  163 (263)
Q Consensus       139 ~~~h~~~h~~~kp~kC~~C~k~F~s  163 (263)
                      |..|+++|++++||+|..|++.|.+
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            5689999999999999999999863

...

>PHA00732 hypothetical protein

Probab=97.96  E-value=5.1e-06  Score=60.26  Aligned_cols=48  Identities=29%  Similarity=0.589  Sum_probs=38.2

Q ss_pred             ccccCcccccccChhhhhhhhhh-cCCCcccccCCCCcccccccccccCCcceecCccccccCCchhhhhHhhhhcC
Q 038614          151 KYKCKTCKKEFRSYQALGGHKAS-HKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFT  226 (263)
Q Consensus       151 p~kC~~C~k~F~s~~~L~~H~~~-H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~  226 (263)
                      ||.|..|++.|.+...|..|++. |.                         ++.|+.|++.|.   .|..|.+++..
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~-------------------------~~~C~~CgKsF~---~l~~H~~~~~~   49 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT-------------------------LTKCPVCNKSYR---RLNQHFYSQYD   49 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC-------------------------CCccCCCCCEeC---ChhhhhcccCC
Confidence            58899999999999999999874 43                         246999999997   47778766554

>PHA00616 hypothetical protein

Probab=97.91  E-value=3e-06  Score=54.07  Aligned_cols=33  Identities=24%  Similarity=0.293  Sum_probs=29.8

Q ss_pred             ccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          151 KYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       151 p~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      ||+|..||+.|..++.|..|++.|+|++++.+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            699999999999999999999999988877643

>PLN03086 PRLI-interacting factor K; Provisional

Probab=97.86  E-value=1.5e-05  Score=77.20  Aligned_cols=72  Identities=18%  Similarity=0.425  Sum_probs=58.9

Q ss_pred             CCccccCcccccccChhhhhhhhhhcCCCcccccCCCCccc-----ccccccccCCcceecCccccccCCc---------
Q 038614          149 TNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAA-----AGGDAVVMDQRVFKCPFCDKVFDSG---------  214 (263)
Q Consensus       149 ~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~-----~~h~~~h~g~kp~~C~~Cgk~F~~~---------  214 (263)
                      ++.+.|..|++.|. ...|..|+++|.  +++.|. |+..+     ..|..+|.+.+++.|.+|++.|..+         
T Consensus       451 ~~H~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~  526 (567)
T PLN03086        451 KNHVHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVLEKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDR  526 (567)
T ss_pred             ccCccCCCCCCccc-hHHHHHHHHhcC--CCccCC-CCCCcchhHHHhhhhccCCCCceeCCCCCCccccCccccchhhh
Confidence            45679999999996 678999999985  778887 87543     3488889999999999999999633         


Q ss_pred             -hhhhhHhhhh
Q 038614          215 -QALGGHKKIH  224 (263)
Q Consensus       215 -~~L~~H~r~H  224 (263)
                       ..|..|..++
T Consensus       527 ~s~Lt~HE~~C  537 (567)
T PLN03086        527 LRGMSEHESIC  537 (567)
T ss_pred             hhhHHHHHHhc
Confidence             4789999886

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.79  E-value=1.2e-05  Score=44.07  Aligned_cols=23  Identities=43%  Similarity=0.920  Sum_probs=21.9

Q ss_pred             eecCccccccCCchhhhhHhhhh
Q 038614          202 FKCPFCDKVFDSGQALGGHKKIH  224 (263)
Q Consensus       202 ~~C~~Cgk~F~~~~~L~~H~r~H  224 (263)
                      |.|+.|++.|.+...|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            78999999999999999999986

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PHA00616 hypothetical protein

Probab=97.73  E-value=1.2e-05  Score=51.30  Aligned_cols=29  Identities=14%  Similarity=0.282  Sum_probs=27.0

Q ss_pred             ceecCccccccCCchhhhhHhhhhcCCCC
Q 038614          201 VFKCPFCDKVFDSGQALGGHKKIHFTYLA  229 (263)
Q Consensus       201 p~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  229 (263)
                      ||+|+.||+.|.+.+.|..|++.|+++..
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~   29 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNK   29 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCc
Confidence            69999999999999999999999999744

>PHA00733 hypothetical protein

Probab=97.66  E-value=4.2e-05  Score=60.65  Aligned_cols=82  Identities=11%  Similarity=0.016  Sum_probs=58.8

Q ss_pred             HHHHHHHhhcccccccccccccccceeeccCCccccCCCCCCCcccccchhhhhcccCCCCccccCcccccccChhhhhh
Q 038614           90 EVAMCLLKLSRDNWLQKDKQVVVAEAVVDEDEYVRGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGG  169 (263)
Q Consensus        90 ~~a~cl~mlsr~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~  169 (263)
                      ..++|-..+.....+..... + ...+...+..++.|..|++.|.....+..|++.+  ..+|.|.+|++.|.....|..
T Consensus        42 ~~~~~~~~~~~~~~l~~~~~-l-~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~~  117 (128)
T PHA00733         42 IRAVVKTLIYNPQLLDESSY-L-YKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDSTLD  117 (128)
T ss_pred             HHHHHhhhccChhhhcchHH-H-HhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHHHH
Confidence            34456666665555542210 0 1112333467889999999999999999999876  457999999999999999999


Q ss_pred             hhhhcC
Q 038614          170 HKASHK  175 (263)
Q Consensus       170 H~~~H~  175 (263)
                      |++...
T Consensus       118 H~~~~h  123 (128)
T PHA00733        118 HVCKKH  123 (128)
T ss_pred             HHHHhc
Confidence            987654

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.59  E-value=3.4e-05  Score=68.78  Aligned_cols=70  Identities=26%  Similarity=0.564  Sum_probs=50.1

Q ss_pred             CCccccCc--ccccccChhhhhhhhhh-cCCCcccccCCCCcccccccccccCCcceecCccccccCCchhhhhHhh
Q 038614          149 TNKYKCKT--CKKEFRSYQALGGHKAS-HKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVFDSGQALGGHKK  222 (263)
Q Consensus       149 ~kp~kC~~--C~k~F~s~~~L~~H~~~-H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r  222 (263)
                      +|||+|++  |.|.+.....|+.|+.- |...+.....    .-..+.-.....|||.|++|+|++.....|+.|+.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p----~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENP----SPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCC----CccccccccccCCceeccccchhhccCccceeccc
Confidence            48999987  99999999999999753 4333222100    11122223446799999999999999999999864

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.50  E-value=5.1e-05  Score=43.23  Aligned_cols=26  Identities=42%  Similarity=0.705  Sum_probs=24.4

Q ss_pred             ceecCccccccCCchhhhhHhhhhcC
Q 038614          201 VFKCPFCDKVFDSGQALGGHKKIHFT  226 (263)
Q Consensus       201 p~~C~~Cgk~F~~~~~L~~H~r~H~~  226 (263)
                      ||.|..|++.|.+...|..|++.|..
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            68999999999999999999999864

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.26  E-value=0.00018  Score=39.20  Aligned_cols=23  Identities=43%  Similarity=0.943  Sum_probs=19.9

Q ss_pred             eecCccccccCCchhhhhHhhhh
Q 038614          202 FKCPFCDKVFDSGQALGGHKKIH  224 (263)
Q Consensus       202 ~~C~~Cgk~F~~~~~L~~H~r~H  224 (263)
                      |.|++|++.|.+...|..|+++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            78999999999999999999987

...

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.24  E-value=0.0001  Score=40.31  Aligned_cols=23  Identities=43%  Similarity=0.777  Sum_probs=21.4

Q ss_pred             cccCcccccccChhhhhhhhhhc
Q 038614          152 YKCKTCKKEFRSYQALGGHKASH  174 (263)
Q Consensus       152 ~kC~~C~k~F~s~~~L~~H~~~H  174 (263)
                      |+|..|++.|.....|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            78999999999999999999875

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=97.12  E-value=0.00043  Score=64.04  Aligned_cols=54  Identities=17%  Similarity=0.222  Sum_probs=45.3

Q ss_pred             ccccCCCCCCCcccccchhhhhcccCC---------------------------------CCccccCcccccccChhhhh
Q 038614          122 YVRGKSDDGDNDEEEDKEEDESSLVSR---------------------------------TNKYKCKTCKKEFRSYQALG  168 (263)
Q Consensus       122 ~~~~c~~c~~~~~~~~~~~~h~~~h~~---------------------------------~kp~kC~~C~k~F~s~~~L~  168 (263)
                      ..|.|.+|++.|...-+|..|.|-|.-                                 ..-|.|..|+|.|+....|.
T Consensus       294 vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLr  373 (500)
T KOG3993|consen  294 VEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLR  373 (500)
T ss_pred             eeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHHH
Confidence            357999999999999999888876631                                 12488999999999999999


Q ss_pred             hhhhhcC
Q 038614          169 GHKASHK  175 (263)
Q Consensus       169 ~H~~~H~  175 (263)
                      .|+.+|.
T Consensus       374 KHqlthq  380 (500)
T KOG3993|consen  374 KHQLTHQ  380 (500)
T ss_pred             HhHHhhh
Confidence            9987775

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.06  E-value=0.00024  Score=40.37  Aligned_cols=26  Identities=42%  Similarity=0.756  Sum_probs=23.8

Q ss_pred             ccccCcccccccChhhhhhhhhhcCC
Q 038614          151 KYKCKTCKKEFRSYQALGGHKASHKK  176 (263)
Q Consensus       151 p~kC~~C~k~F~s~~~L~~H~~~H~~  176 (263)
                      +|+|..|++.|....+|..|++.|.+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            68999999999999999999998853

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.00  E-value=0.00041  Score=51.46  Aligned_cols=72  Identities=24%  Similarity=0.405  Sum_probs=22.4

Q ss_pred             ccCcccccccChhhhhhhhhhcCCCc-ccccCCCCc-ccccccccccCCcceecCccccccCCchhhhhHhhhhc
Q 038614          153 KCKTCKKEFRSYQALGGHKASHKKIK-IHHNGSSDA-AAAGGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHF  225 (263)
Q Consensus       153 kC~~C~k~F~s~~~L~~H~~~H~~~k-p~~~~~~~~-~~~~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~  225 (263)
                      +|..|+..|.....|..|+....+.. +-...+... ....+.+.. -...+.|..|++.|.+...|..|++.+.
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~C~~C~~~f~s~~~l~~Hm~~~~   74 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPDQKYLVDPNRLLNYLRKK-VKESFRCPYCNKTFRSREALQEHMRSKH   74 (100)
T ss_dssp             -------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHTT
T ss_pred             Cccccccccccccccccccccccccccccccccccccccccccccc-cCCCCCCCccCCCCcCHHHHHHHHcCcc
Confidence            58899999999999999986543322 111111111 111121111 1237999999999999999999999753

>smart00355 ZnF_C2H2 zinc finger

Probab=96.89  E-value=0.00065  Score=37.40  Aligned_cols=25  Identities=44%  Similarity=0.852  Sum_probs=22.9

Q ss_pred             eecCccccccCCchhhhhHhhhhcC
Q 038614          202 FKCPFCDKVFDSGQALGGHKKIHFT  226 (263)
Q Consensus       202 ~~C~~Cgk~F~~~~~L~~H~r~H~~  226 (263)
                      |.|..|++.|.....|..|++.|..
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~~   25 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHXX   25 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhcc
Confidence            6899999999999999999998864

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=96.85  E-value=0.0012  Score=44.08  Aligned_cols=51  Identities=24%  Similarity=0.436  Sum_probs=38.5

Q ss_pred             ccccCcccccccChhhhhhhhh-hcCCCcccccCCCCcccccccccccCCcceecCccccccCCchhhhhHhhhhc
Q 038614          151 KYKCKTCKKEFRSYQALGGHKA-SHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHF  225 (263)
Q Consensus       151 p~kC~~C~k~F~s~~~L~~H~~-~H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~  225 (263)
                      .|.|+.|++. .....|..|.. .|..+                     .+.+.|++|...+.  ..|..|++.+.
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~H~~~---------------------~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDEHRSE---------------------SKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhHCcCC---------------------CCCccCCCchhhhh--hHHHHHHHHhc
Confidence            4899999995 55678999955 35432                     35789999998765  48999988754

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00732 hypothetical protein

Probab=96.82  E-value=0.00065  Score=49.23  Aligned_cols=47  Identities=19%  Similarity=0.136  Sum_probs=38.3

Q ss_pred             cccCCCCCCCcccccchhhhhcc-cCCCCccccCcccccccChhhhhhhhhhcC
Q 038614          123 VRGKSDDGDNDEEEDKEEDESSL-VSRTNKYKCKTCKKEFRSYQALGGHKASHK  175 (263)
Q Consensus       123 ~~~c~~c~~~~~~~~~~~~h~~~-h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~  175 (263)
                      ++.|..|++.|.....+..|++. |.   ++.|..|++.|.   .|..|..++.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~~~   48 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYSQY   48 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---ChhhhhcccC
Confidence            36799999999999999999874 55   468999999998   4777875544

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=96.50  E-value=0.001  Score=36.06  Aligned_cols=23  Identities=39%  Similarity=0.814  Sum_probs=19.4

Q ss_pred             cccCcccccccChhhhhhhhhhc
Q 038614          152 YKCKTCKKEFRSYQALGGHKASH  174 (263)
Q Consensus       152 ~kC~~C~k~F~s~~~L~~H~~~H  174 (263)
                      |.|..|++.|.+...|..|++.|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            68999999999999999998875

...

>smart00355 ZnF_C2H2 zinc finger

Probab=95.97  E-value=0.0042  Score=33.97  Aligned_cols=24  Identities=42%  Similarity=0.809  Sum_probs=21.8

Q ss_pred             cccCcccccccChhhhhhhhhhcC
Q 038614          152 YKCKTCKKEFRSYQALGGHKASHK  175 (263)
Q Consensus       152 ~kC~~C~k~F~s~~~L~~H~~~H~  175 (263)
                      |+|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            689999999999999999998775

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.69  E-value=0.0061  Score=33.73  Aligned_cols=23  Identities=35%  Similarity=0.735  Sum_probs=21.3

Q ss_pred             eecCccccccCCchhhhhHhhhh
Q 038614          202 FKCPFCDKVFDSGQALGGHKKIH  224 (263)
Q Consensus       202 ~~C~~Cgk~F~~~~~L~~H~r~H  224 (263)
                      |.|.+|++.|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            68999999999999999999865

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=95.57  E-value=0.012  Score=38.67  Aligned_cols=29  Identities=24%  Similarity=0.533  Sum_probs=21.4

Q ss_pred             CCcceecCccccccCCchhhhhHhhhhcC
Q 038614          198 DQRVFKCPFCDKVFDSGQALGGHKKIHFT  226 (263)
Q Consensus       198 g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~  226 (263)
                      .+.|..|++|+..+.+..+|.+|+.++.+
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~   49 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHF   49 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTT
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhc
Confidence            46799999999999999999999987665

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=94.97  E-value=0.008  Score=33.23  Aligned_cols=23  Identities=35%  Similarity=0.671  Sum_probs=21.1

Q ss_pred             cccCcccccccChhhhhhhhhhc
Q 038614          152 YKCKTCKKEFRSYQALGGHKASH  174 (263)
Q Consensus       152 ~kC~~C~k~F~s~~~L~~H~~~H  174 (263)
                      |.|.+|++.|.+...|..|++++
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            67999999999999999998865

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=94.96  E-value=0.017  Score=31.69  Aligned_cols=23  Identities=35%  Similarity=0.664  Sum_probs=18.8

Q ss_pred             eecCccccccCCchhhhhHhhhhc
Q 038614          202 FKCPFCDKVFDSGQALGGHKKIHF  225 (263)
Q Consensus       202 ~~C~~Cgk~F~~~~~L~~H~r~H~  225 (263)
                      |+|+.|..... ...|..|++.|.
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            78999999998 889999999864

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=94.66  E-value=0.015  Score=33.02  Aligned_cols=23  Identities=43%  Similarity=0.719  Sum_probs=20.9

Q ss_pred             eecCccccccCCchhhhhHhhhh
Q 038614          202 FKCPFCDKVFDSGQALGGHKKIH  224 (263)
Q Consensus       202 ~~C~~Cgk~F~~~~~L~~H~r~H  224 (263)
                      |-|..|++.|.+...|..|++..
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~sk   24 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKSK   24 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTSH
T ss_pred             CCcccCCCCcCCHHHHHHHHccC
Confidence            78999999999999999998763

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PRK04860 hypothetical protein; Provisional

Probab=94.62  E-value=0.018  Score=47.42  Aligned_cols=22  Identities=23%  Similarity=0.519  Sum_probs=15.2

Q ss_pred             ccccccCCcceecCccccccCC
Q 038614          192 GDAVVMDQRVFKCPFCDKVFDS  213 (263)
Q Consensus       192 h~~~h~g~kp~~C~~Cgk~F~~  213 (263)
                      |.++|+++++|.|..|++.|..
T Consensus       134 H~ri~~g~~~YrC~~C~~~l~~  155 (160)
T PRK04860        134 HNRVVRGEAVYRCRRCGETLVF  155 (160)
T ss_pred             HHHHhcCCccEECCCCCceeEE
Confidence            4445556778888888887754

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=94.28  E-value=0.026  Score=37.03  Aligned_cols=33  Identities=18%  Similarity=0.224  Sum_probs=23.5

Q ss_pred             CCCCccccCcccccccChhhhhhhhhhcCCCcc
Q 038614          147 SRTNKYKCKTCKKEFRSYQALGGHKASHKKIKI  179 (263)
Q Consensus       147 ~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp  179 (263)
                      ..+.|..|.+|+..+.+..+|.+|+.++.+.||
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            356789999999999999999999988776664

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=94.10  E-value=0.029  Score=31.76  Aligned_cols=23  Identities=35%  Similarity=0.635  Sum_probs=20.8

Q ss_pred             cccCcccccccChhhhhhhhhhc
Q 038614          152 YKCKTCKKEFRSYQALGGHKASH  174 (263)
Q Consensus       152 ~kC~~C~k~F~s~~~L~~H~~~H  174 (263)
                      |.|..|++.|.....|..|+++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~sk   24 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKSK   24 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTSH
T ss_pred             CCcccCCCCcCCHHHHHHHHccC
Confidence            78999999999999999998763

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=94.05  E-value=0.043  Score=57.58  Aligned_cols=78  Identities=19%  Similarity=0.299  Sum_probs=53.1

Q ss_pred             cCCCCccccCcccccccChhhhhhhhhh-cC-CCcccccCCCCcccc-cccccccCCcceecCccccccCCchhhhhHhh
Q 038614          146 VSRTNKYKCKTCKKEFRSYQALGGHKAS-HK-KIKIHHNGSSDAAAA-GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKK  222 (263)
Q Consensus       146 h~~~kp~kC~~C~k~F~s~~~L~~H~~~-H~-~~kp~~~~~~~~~~~-~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r  222 (263)
                      +...+.|+|..|+..|...+.|..|+|+ |. ....|...+...... +......+-++|.|..|...|..+.+|-+|+.
T Consensus       460 ~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~Lsihlq  539 (1406)
T KOG1146|consen  460 HSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQ  539 (1406)
T ss_pred             ecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeecchHHHHHHH
Confidence            5556889999999999999999999997 32 222121111100000 11111234679999999999999999999986


Q ss_pred             h
Q 038614          223 I  223 (263)
Q Consensus       223 ~  223 (263)
                      .
T Consensus       540 S  540 (1406)
T KOG1146|consen  540 S  540 (1406)
T ss_pred             H
Confidence            4

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=93.23  E-value=0.057  Score=30.19  Aligned_cols=21  Identities=38%  Similarity=0.877  Sum_probs=18.0

Q ss_pred             eecCccccccCCchhhhhHhhh
Q 038614          202 FKCPFCDKVFDSGQALGGHKKI  223 (263)
Q Consensus       202 ~~C~~Cgk~F~~~~~L~~H~r~  223 (263)
                      ..|+.||+.| ....|..|+++
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            4799999999 67888999875

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=93.09  E-value=0.026  Score=48.85  Aligned_cols=47  Identities=21%  Similarity=0.229  Sum_probs=38.9

Q ss_pred             cCCCCCCCcccccchhhhhcccCCCCccccCcccccccChhhhhhh-hhhcC
Q 038614          125 GKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGH-KASHK  175 (263)
Q Consensus       125 ~c~~c~~~~~~~~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H-~~~H~  175 (263)
                      =||-|..+|+++..|..|++    .|-|+|.+|.|.+-+--.|..| +++|+
T Consensus        12 wcwycnrefddekiliqhqk----akhfkchichkkl~sgpglsihcmqvhk   59 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQK----AKHFKCHICHKKLFSGPGLSIHCMQVHK   59 (341)
T ss_pred             eeeecccccchhhhhhhhhh----hccceeeeehhhhccCCCceeehhhhhh
Confidence            38999999999888877764    4669999999988888888888 66776

>PRK04860 hypothetical protein; Provisional

Probab=93.03  E-value=0.04  Score=45.31  Aligned_cols=36  Identities=14%  Similarity=0.301  Sum_probs=28.2

Q ss_pred             CccccCcccccccChhhhhhhhhhcCCCcccccCCCCccc
Q 038614          150 NKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAA  189 (263)
Q Consensus       150 kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~  189 (263)
                      -+|.|. |++   ....+.+|.++|+++++|.|..|...+
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l  153 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETL  153 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCcee
Confidence            368887 887   566778888888888888888887654

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=92.93  E-value=0.05  Score=39.99  Aligned_cols=24  Identities=42%  Similarity=0.798  Sum_probs=21.4

Q ss_pred             ccccCcccccccChhhhhhhhhhc
Q 038614          151 KYKCKTCKKEFRSYQALGGHKASH  174 (263)
Q Consensus       151 p~kC~~C~k~F~s~~~L~~H~~~H  174 (263)
                      .+.|..|++.|.+...|..|++.+
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCc
Confidence            699999999999999999999865

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=92.84  E-value=0.064  Score=48.32  Aligned_cols=58  Identities=12%  Similarity=0.241  Sum_probs=41.4

Q ss_pred             eeeccCCccccCC--CCCCCcccccchhhhhcc-c------------------CCCCccccCcccccccChhhhhhhhh
Q 038614          115 AVVDEDEYVRGKS--DDGDNDEEEDKEEDESSL-V------------------SRTNKYKCKTCKKEFRSYQALGGHKA  172 (263)
Q Consensus       115 ~~~~~~~~~~~c~--~c~~~~~~~~~~~~h~~~-h------------------~~~kp~kC~~C~k~F~s~~~L~~H~~  172 (263)
                      .+.--++++|.|.  -|++.+....-|+.|+.- |                  ...|||+|++|+|.+.....|+.|+.
T Consensus       341 ~l~v~d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         341 MLKVKDGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             eeEeecCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            3444456888887  477877766555555421 1                  23589999999999999999988865

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=92.36  E-value=0.14  Score=47.02  Aligned_cols=60  Identities=17%  Similarity=0.122  Sum_probs=54.4

Q ss_pred             ccccCCCCCCCcccccchhhhhc--ccCCC--CccccC--cccccccChhhhhhhhhhcCCCcccc
Q 038614          122 YVRGKSDDGDNDEEEDKEEDESS--LVSRT--NKYKCK--TCKKEFRSYQALGGHKASHKKIKIHH  181 (263)
Q Consensus       122 ~~~~c~~c~~~~~~~~~~~~h~~--~h~~~--kp~kC~--~C~k~F~s~~~L~~H~~~H~~~kp~~  181 (263)
                      ..+.|..|...+.....+..|.+  .|+++  +++.|.  .|++.|.....+..|...|.+.+++.
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  353 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAK  353 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccc
Confidence            46788899999999999999999  89999  999999  79999999999999999999887654

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=91.59  E-value=0.13  Score=34.21  Aligned_cols=50  Identities=14%  Similarity=0.112  Sum_probs=36.0

Q ss_pred             cccCCCCCCCcccccchhhhhc-ccCC-CCccccCcccccccChhhhhhhhhhcC
Q 038614          123 VRGKSDDGDNDEEEDKEEDESS-LVSR-TNKYKCKTCKKEFRSYQALGGHKASHK  175 (263)
Q Consensus       123 ~~~c~~c~~~~~~~~~~~~h~~-~h~~-~kp~kC~~C~k~F~s~~~L~~H~~~H~  175 (263)
                      .|.|.-|++.++ ...|..|.. .|.. .+.+.|++|...+.  .+|..|+..+.
T Consensus         2 ~f~CP~C~~~~~-~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGKGFS-ESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCCccC-HHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            468999999544 567888864 3544 35799999998655  48888877643

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=90.35  E-value=0.098  Score=45.36  Aligned_cols=30  Identities=33%  Similarity=0.583  Sum_probs=25.6

Q ss_pred             CCcceecCccccccCCchhhhhH-hhhhcCC
Q 038614          198 DQRVFKCPFCDKVFDSGQALGGH-KKIHFTY  227 (263)
Q Consensus       198 g~kp~~C~~Cgk~F~~~~~L~~H-~r~H~~~  227 (263)
                      ..|.|+|.+|.|...++-.|..| +.+|..-
T Consensus        31 kakhfkchichkkl~sgpglsihcmqvhket   61 (341)
T KOG2893|consen   31 KAKHFKCHICHKKLFSGPGLSIHCMQVHKET   61 (341)
T ss_pred             hhccceeeeehhhhccCCCceeehhhhhhhh
Confidence            46889999999999999999998 7788754

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=89.65  E-value=0.16  Score=46.54  Aligned_cols=59  Identities=29%  Similarity=0.511  Sum_probs=43.5

Q ss_pred             CccccCcccccccChhhhhhhhh--hcCCCcccccCCCCcccccccccccCCcceecC--ccccccCCchhhhhHhhhhc
Q 038614          150 NKYKCKTCKKEFRSYQALGGHKA--SHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCP--FCDKVFDSGQALGGHKKIHF  225 (263)
Q Consensus       150 kp~kC~~C~k~F~s~~~L~~H~~--~H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~--~Cgk~F~~~~~L~~H~r~H~  225 (263)
                      .++.|..|...|.....|..|.+  .|.++.                    .++|.|+  .|++.|.+...+..|..+|+
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~--------------------~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  347 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGES--------------------LKPFSCPYSLCGKLFSRNDALKRHILLHT  347 (467)
T ss_pred             cCCCCccccCCcccccccccccccccccccc--------------------CCceeeeccCCCccccccccccCCccccc
Confidence            46888888888888888888877  455430                    1677777  68888888888888888877


Q ss_pred             CCC
Q 038614          226 TYL  228 (263)
Q Consensus       226 ~~~  228 (263)
                      +-.
T Consensus       348 ~~~  350 (467)
T COG5048         348 SIS  350 (467)
T ss_pred             CCC
Confidence            643

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=89.15  E-value=0.15  Score=27.80  Aligned_cols=23  Identities=30%  Similarity=0.559  Sum_probs=17.6

Q ss_pred             cccCcccccccChhhhhhhhhhcC
Q 038614          152 YKCKTCKKEFRSYQALGGHKASHK  175 (263)
Q Consensus       152 ~kC~~C~k~F~s~~~L~~H~~~H~  175 (263)
                      |+|..|..... ...|..|++.|.
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            78999998887 889999988753

>smart00451 ZnF_U1 U1-like zinc finger

Probab=88.52  E-value=0.29  Score=29.02  Aligned_cols=23  Identities=26%  Similarity=0.530  Sum_probs=20.4

Q ss_pred             ceecCccccccCCchhhhhHhhh
Q 038614          201 VFKCPFCDKVFDSGQALGGHKKI  223 (263)
Q Consensus       201 p~~C~~Cgk~F~~~~~L~~H~r~  223 (263)
                      +|-|..|++.|....++..|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            58899999999999999999764

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=87.77  E-value=0.29  Score=28.98  Aligned_cols=23  Identities=22%  Similarity=0.508  Sum_probs=20.3

Q ss_pred             ccccCcccccccChhhhhhhhhh
Q 038614          151 KYKCKTCKKEFRSYQALGGHKAS  173 (263)
Q Consensus       151 p~kC~~C~k~F~s~~~L~~H~~~  173 (263)
                      +|.|..|++.|....++..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            58899999999999999888764

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=82.26  E-value=0.77  Score=39.51  Aligned_cols=24  Identities=29%  Similarity=0.624  Sum_probs=18.0

Q ss_pred             CCccccCcccccccChhhhhhhhh
Q 038614          149 TNKYKCKTCKKEFRSYQALGGHKA  172 (263)
Q Consensus       149 ~kp~kC~~C~k~F~s~~~L~~H~~  172 (263)
                      ++.+.|++|++.|....-..+..+
T Consensus         3 ~k~~~CPvC~~~F~~~~vrs~~~r   26 (214)
T PF09986_consen    3 DKKITCPVCGKEFKTKKVRSGKIR   26 (214)
T ss_pred             CCceECCCCCCeeeeeEEEcCCce
Confidence            356899999999988766555544

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=82.14  E-value=0.67  Score=49.10  Aligned_cols=70  Identities=21%  Similarity=0.363  Sum_probs=45.1

Q ss_pred             CccccCcccccccChhhhhhhhhhcCCCcccccCCCCccc-ccccccccCCcceecCccccccCCchhhhhHhhhhcC
Q 038614          150 NKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAA-AGGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFT  226 (263)
Q Consensus       150 kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~-~~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~  226 (263)
                      .+|.|..|.-.|.....|..|++  .    +...+..... .-+...+-.-++| |..|...|....+|..|+|+-..
T Consensus      1283 ~~~~~~~~~~~~~~~~~l~~~~~--k----~~~~~~~~~~~~~~~l~~~d~~~~-c~~c~~~~~~~~alqihm~~~~~ 1353 (1406)
T KOG1146|consen 1283 HRYLCRQCKMAFDGEAPLTAHQR--K----FCFAGRGSGGSMPPPLRVPDCTYH-CLACEVLLSGREALQIHMRSSAH 1353 (1406)
T ss_pred             hhHHHHHHHhhhcchhHHHHHHH--H----HHhccCccccCCCCcccCcccccc-chHHHhhcchhHHHHHHHHHhhh
Confidence            45778888888888877777762  1    1001111110 1133334445678 99999999999999999997443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	263
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	5e-09
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	4e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	8e-05
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-04
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-04
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-04

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A Length = 39

 Score = 49.8 bits (119), Expect = 5e-09
 Identities = 15/26 (57%), Positives = 18/26 (69%)

Query: 151 KYKCKTCKKEFRSYQALGGHKASHKK 176
            Y C  CK+EFRS QALGGH   H++
Sbjct: 6   SYTCSFCKREFRSAQALGGHMNVHRR 31

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A Length = 39

 Score = 47.4 bits (113), Expect = 4e-08
 Identities = 13/25 (52%), Positives = 16/25 (64%)

Query: 200 RVFKCPFCDKVFDSGQALGGHKKIH 224
           R + C FC + F S QALGGH  +H
Sbjct: 5   RSYTCSFCKREFRSAQALGGHMNVH 29

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.3 bits (101), Expect = 6e-05
 Identities = 42/281 (14%), Positives = 74/281 (26%), Gaps = 86/281 (30%)

Query: 9   FAKHPISSSNINPSPP--KYPSSSSSLSNMQTYRSVNNRPFSGLEDESEAESSRNLTKAR 66
           F   PI +    PS     Y      L N       +N+ F+            N+++ +
Sbjct: 93  FLMSPIKTEQRQPSMMTRMYIEQRDRLYN-------DNQVFA----------KYNVSRLQ 135

Query: 67  SKRPLRTIESVSNSVTENFLSDREVAMCLLKLSRDNWLQKD------KQVVVAEAVVDED 120
               LR                      LL+L     +  D      K  V  +  +   
Sbjct: 136 PYLKLRQ--------------------ALLELRPAKNVLIDGVLGSGKTWVALDVCLSYK 175

Query: 121 EYVRGKSDD-------GDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKAS 173
             V+ K D         + +  E   E    L+ + +                +   +A 
Sbjct: 176 --VQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAE 233

Query: 174 HKKIKIHHNGSS-----DAAAAGGDAVVMDQRVFKCPF---C-------DK-VFDSGQAL 217
            +++       +            +  V + + +   F   C        K V D    L
Sbjct: 234 LRRLLKSKPYENCLLVLL------N--VQNAKAWN-AFNLSCKILLTTRFKQVTD---FL 281

Query: 218 GGHKKIHFTYLATPITKITSSAKSSGAKFIDLN---LPAPE 255
                 H +     +T      KS   K++D     LP  E
Sbjct: 282 SAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLP-RE 321

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 39.8 bits (92), Expect = 7e-04
 Identities = 39/242 (16%), Positives = 65/242 (26%), Gaps = 73/242 (30%)

Query: 61  NLTKARSKRPLRTIESVSNSVTENFLSDREVAMCLLKLS--RDN-----------WLQKD 107
           N       +    IES   S+  N L   E      +LS    +           W    
Sbjct: 346 NWKHVNCDKLTTIIES---SL--NVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVI 400

Query: 108 KQVVVAEAVVDEDEYVRGKSD-DGDNDEE---------------EDKEEDESSLVSRTNK 151
           K  V    VV++   +   S  +    E                E++     S+V   N 
Sbjct: 401 KSDV--MVVVNK---LHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNI 455

Query: 152 YKCKTCKKEFR------SYQALGGH--KASH-------KKI---------KIHHNGSSDA 187
            K                Y  +G H     H       + +         KI H+ ++  
Sbjct: 456 PKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWN 515

Query: 188 AAAGGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLATPITKITSSAKSSGAKFI 247
           A+      +   + +K   CD      + +     + F  L      +  S      K+ 
Sbjct: 516 ASGSILNTLQQLKFYKPYICDNDPKYERLVNAI--LDF--LPKIEENLICS------KYT 565

Query: 248 DL 249
           DL
Sbjct: 566 DL 567

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 40.1 bits (93), Expect = 8e-05
 Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 11/81 (13%)

Query: 151 KYKCKTCKKEFRSYQALGGHKAS--HKKIKIHHNGSS---------DAAAAGGDAVVMDQ 199
           K++CK C   + +   L  H     H +   H   ++           +    +     Q
Sbjct: 19  KFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQ 78

Query: 200 RVFKCPFCDKVFDSGQALGGH 220
           +V KC +C   F+S Q L  H
Sbjct: 79  KVLKCMYCGHSFESLQDLSVH 99

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 16/73 (21%), Positives = 23/73 (31%), Gaps = 20/73 (27%)

Query: 152 YKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVF 211
           Y+CK C + +        H  +      H                   +V+ CPFC K F
Sbjct: 11  YRCKVCSRVYTHISNFCRHYVTS-----HKRN---------------VKVYPCPFCFKEF 50

Query: 212 DSGQALGGHKKIH 224
                +  H KI 
Sbjct: 51  TRKDNMTAHVKII 63

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 38.5 bits (90), Expect = 2e-04
 Identities = 13/73 (17%), Positives = 22/73 (30%), Gaps = 19/73 (26%)

Query: 152 YKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVF 211
            +C+ C    R   +L  H+  H +                         F C FC K F
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAA-------------------LRFPCEFCGKRF 48

Query: 212 DSGQALGGHKKIH 224
           +   ++  H+   
Sbjct: 49  EKPDSVAAHRSKS 61

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 37.5 bits (88), Expect = 4e-04
 Identities = 19/73 (26%), Positives = 23/73 (31%), Gaps = 18/73 (24%)

Query: 152 YKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVF 211
           Y C  C K FR  Q L  H       K +H+ +   AA            F C  C K F
Sbjct: 16  YACSHCDKTFRQKQLLDMHF------KRYHDPNFVPAA------------FVCSKCGKTF 57

Query: 212 DSGQALGGHKKIH 224
                +  H    
Sbjct: 58  TRRNTMARHADNC 70

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	263
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.76
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.76
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.75
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.74
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.74
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.73
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.73
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.68
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.68
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.68
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.68
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.67
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.66
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.66
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.63
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.63
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.62
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.62
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.61
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.6
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.59
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.52
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.52
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.51
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.49
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.48
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.47
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.47
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.44
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.44
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.43
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.42
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.41
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.4
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.4
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.39
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.39
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.38
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.38
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.38
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.37
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.37
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.34
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.32
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.32
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.3
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.28
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.26
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.23
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.23
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.18
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.16
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.14
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.13
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.13
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.12
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.12
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.11
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.09
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.08
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.08
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.06
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.05
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.05
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.04
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.03
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.03
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.01
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.0
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.0
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.0
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.0
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.0
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.99
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.99
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.98
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	98.98
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.98
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.98
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.98
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.98
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.98
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.98
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.98
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.98
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.98
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.98
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.97
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.97
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.97
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.97
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.97
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.96
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.96
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.96
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.96
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.96
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.96
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.96
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.96
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.96
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.95
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.95
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.95
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.95
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.95
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.94
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	98.94
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.94
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.94
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.94
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.93
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.93
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.93
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	98.93
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.93
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	98.92
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.92
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	98.92
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	98.91
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.91
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.91
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.91
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.9
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.9
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.9
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.9
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.9
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.9
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.9
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.89
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.89
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.89
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.89
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.89
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.89
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.89
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.88
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.88
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.88
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.88
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.88
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.88
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.88
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.88
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.87
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.87
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.87
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.87
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.87
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.87
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.87
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.87
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.86
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.86
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.86
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	98.86
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.86
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.85
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.85
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.85
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	98.84
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.84
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.84
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.83
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.83
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.82
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.82
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.81
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.81
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.8
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	98.79
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.78
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.77
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.77
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.77
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.77
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.76
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.76
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.76
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.76
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	98.75
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.75
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.75
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.74
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.74
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.74
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.74
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.74
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.74
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.74
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.74
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.73
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.73
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.73
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.73
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.73
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.73
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.73
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.73
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.73
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.73
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.73
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.73
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.73
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.73
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.73
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.73
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.73
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.73
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.72
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.72
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.72
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.72
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.72
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.72
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.72
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.72
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.72
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.72
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.72
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.72
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.72
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.72
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.72
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.72
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	98.71
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.71
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.71
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.71
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.71
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.71
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.71
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.71
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.71
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.71
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.71
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.7
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.7
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.7
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.7
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.7
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.7
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.7
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.7
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.7
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.7
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.7
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.7
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.7
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.7
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.7
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.69
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.69
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.69
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.69
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.69
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.69
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.69
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.69
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.68
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.68
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.68
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.68
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.68
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.68
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.67
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.67
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.67
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.66
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.66
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.66
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.65
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.65
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.64
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.64
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.63
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.62
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.61
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.61
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.6
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.6
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.6
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.6
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.59
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.58
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.57
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.57
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.57
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.57
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.55
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.55
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	98.55
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.53
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.53
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.52
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.5
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.48
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.47
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.46
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.44
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.43
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.41
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.41
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.4
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.4
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.39
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.39
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.39
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.38
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.38
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.38
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.37
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.36
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.35
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.35
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.35
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.35
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.34
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.33
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.32
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.32
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.32
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.31
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.29
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.28
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.28
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.26
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.25
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.25
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.25
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.24
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.22
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.2
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.19
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.5
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.49
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.16
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.16
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.45
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.14
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.13
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.12
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.09
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.08
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.06
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.04
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.28
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.02
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.02
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.02
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.02
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.01
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.0
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.0
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.25
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	97.99
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.98
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.98
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.97
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.97
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.03
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	97.8
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.61
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.56
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.9
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.75
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	95.64
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.41
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	93.62
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	91.59
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	86.71

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.76  E-value=2.4e-20  Score=154.80  Aligned_cols=108  Identities=19%  Similarity=0.307  Sum_probs=59.7

Q ss_pred             CCccccCCCCCCCcccccchhhhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccCCCCccc------cccc
Q 038614          120 DEYVRGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAA------AGGD  193 (263)
Q Consensus       120 ~~~~~~c~~c~~~~~~~~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~------~~h~  193 (263)
                      +..++.|..|++.|.....|..|+++|.++++|.|..|++.|.....|..|+++|.++++|.|..|+..+      ..|+
T Consensus        46 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  125 (190)
T 2i13_A           46 GEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQ  125 (190)
T ss_dssp             --CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHH
T ss_pred             CCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHH
Confidence            3445555556655555555555555555555555555555555555555555555555555555555443      1245


Q ss_pred             ccccCCcceecCccccccCCchhhhhHhhhhcCC
Q 038614          194 AVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       194 ~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      ++|.++++|.|++|++.|.+...|..|+++|.++
T Consensus       126 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  159 (190)
T 2i13_A          126 RTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGE  159 (190)
T ss_dssp             HHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCC
T ss_pred             HHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCC
Confidence            5555555555555555555555555555555554

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.76  E-value=3.7e-19  Score=136.90  Aligned_cols=108  Identities=12%  Similarity=0.111  Sum_probs=99.0

Q ss_pred             CCccccCCCCCCCcccccchhhhhcccCCCCccccCcccccccChhhhhhhhhh---cCCCcccccCCCCccc------c
Q 038614          120 DEYVRGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKAS---HKKIKIHHNGSSDAAA------A  190 (263)
Q Consensus       120 ~~~~~~c~~c~~~~~~~~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~---H~~~kp~~~~~~~~~~------~  190 (263)
                      +...+.|..|++.|.....|..|+++|.++++|+|..|++.|.....|..|++.   |.++++|.|..|+..|      .
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~   83 (124)
T 2dlq_A            4 GSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELR   83 (124)
T ss_dssp             CCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHH
T ss_pred             CCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHH
Confidence            456789999999999999999999999999999999999999999999999985   6888999999999876      3


Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhh-hhcCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKK-IHFTY  227 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r-~H~~~  227 (263)
                      .|+++|.+++||.|++|++.|.+...|..|++ .|.++
T Consensus        84 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A           84 LHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             HHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCS
T ss_pred             HHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCC
Confidence            48899999999999999999999999999997 57664

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.75  E-value=1.9e-19  Score=149.37  Aligned_cols=113  Identities=19%  Similarity=0.277  Sum_probs=97.8

Q ss_pred             eeccCCccccCCCCCCCcccccchhhhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccCCCCccc------
Q 038614          116 VVDEDEYVRGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAA------  189 (263)
Q Consensus       116 ~~~~~~~~~~c~~c~~~~~~~~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~------  189 (263)
                      ....+..++.|..|++.|.....|..|+++|.++++|.|..|++.|.+...|..|+++|.++++|.|..|+..+      
T Consensus        70 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L  149 (190)
T 2i13_A           70 RTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNL  149 (190)
T ss_dssp             HHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHH
T ss_pred             HhcCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHH
Confidence            34456678899999999999999999999999999999999999999999999999999999999999998876      


Q ss_pred             ccccccccCCcceecCccccccCCchhhhhHhhhhcCCC
Q 038614          190 AGGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYL  228 (263)
Q Consensus       190 ~~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  228 (263)
                      ..|+++|+++++|.|++|++.|.+...|..|+++|+++.
T Consensus       150 ~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k  188 (190)
T 2i13_A          150 HTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKK  188 (190)
T ss_dssp             HHHHHHHHCCCCEECTTTCCEESSHHHHHHHHTTC----
T ss_pred             HHHHHhcCCCCCeECCCCCCccCCHHHHHHHHHhcCCCC
Confidence            348888999999999999999999999999999998864

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.74  E-value=6.5e-19  Score=135.99  Aligned_cols=107  Identities=16%  Similarity=0.145  Sum_probs=95.0

Q ss_pred             CccccCC--CCCCCcccccchhhhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccCC--CCccc------c
Q 038614          121 EYVRGKS--DDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGS--SDAAA------A  190 (263)
Q Consensus       121 ~~~~~c~--~c~~~~~~~~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~--~~~~~------~  190 (263)
                      ...+.|.  .|++.|.....|..|+++| ++++|.|..|++.|.....|..|+++|.++++|.|.+  |+..+      .
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~   81 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLR   81 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHH
Confidence            3467888  8999999999999999999 8899999999999999999999999999999999986  88876      3


Q ss_pred             cccccccCCcceecC--ccccccCCchhhhhHhhhhcCCC
Q 038614          191 GGDAVVMDQRVFKCP--FCDKVFDSGQALGGHKKIHFTYL  228 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~--~Cgk~F~~~~~L~~H~r~H~~~~  228 (263)
                      .|+++|.++++|.|+  .|++.|.+...|..|+++|+++.
T Consensus        82 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k  121 (124)
T 1ubd_C           82 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK  121 (124)
T ss_dssp             HHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC---
T ss_pred             HHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccc
Confidence            488999999999996  59999999999999999999763

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.74  E-value=4.7e-19  Score=135.52  Aligned_cols=105  Identities=17%  Similarity=0.285  Sum_probs=98.0

Q ss_pred             CCccccCCC--CCCCcccccchhhhhcccCCCCccccC--cccccccChhhhhhhhhhcCCCcccccCCCCccc------
Q 038614          120 DEYVRGKSD--DGDNDEEEDKEEDESSLVSRTNKYKCK--TCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAA------  189 (263)
Q Consensus       120 ~~~~~~c~~--c~~~~~~~~~~~~h~~~h~~~kp~kC~--~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~------  189 (263)
                      ++.++.|..  |++.|.....|..|+++|.++++|.|.  .|++.|.....|..|+++|.++++|.|..|+..|      
T Consensus         3 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   82 (119)
T 2jp9_A            3 EKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHL   82 (119)
T ss_dssp             SSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHH
T ss_pred             CCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHH
Confidence            456789986  999999999999999999999999999  7999999999999999999999999999999876      


Q ss_pred             ccccccccCCcceec--CccccccCCchhhhhHhhhh
Q 038614          190 AGGDAVVMDQRVFKC--PFCDKVFDSGQALGGHKKIH  224 (263)
Q Consensus       190 ~~h~~~h~g~kp~~C--~~Cgk~F~~~~~L~~H~r~H  224 (263)
                      ..|+++|+++++|.|  +.|++.|.+...|..|+++|
T Consensus        83 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           83 KTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            348899999999999  89999999999999999987

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.73  E-value=2.1e-18  Score=138.32  Aligned_cols=114  Identities=18%  Similarity=0.211  Sum_probs=102.5

Q ss_pred             ccCCccccCCCCCCCcccccchhhhhcc-cCCCCc--------cccCcccccccChhhhhhhhhhcCCCcccccCC--CC
Q 038614          118 DEDEYVRGKSDDGDNDEEEDKEEDESSL-VSRTNK--------YKCKTCKKEFRSYQALGGHKASHKKIKIHHNGS--SD  186 (263)
Q Consensus       118 ~~~~~~~~c~~c~~~~~~~~~~~~h~~~-h~~~kp--------~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~--~~  186 (263)
                      .+....+.|..|++.|.....|..|++. |.+..+        |.|.+|++.|.....|..|+++|.++++|.|.+  |+
T Consensus        20 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~   99 (155)
T 2rpc_A           20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCG   99 (155)
T ss_dssp             CTTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTC
T ss_pred             chhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCC
Confidence            4456678999999999999999999987 777665        899999999999999999999999999999998  98


Q ss_pred             ccc------ccccccccCCcceecCc--cccccCCchhhhhHhhhhcCCCCCC
Q 038614          187 AAA------AGGDAVVMDQRVFKCPF--CDKVFDSGQALGGHKKIHFTYLATP  231 (263)
Q Consensus       187 ~~~------~~h~~~h~g~kp~~C~~--Cgk~F~~~~~L~~H~r~H~~~~~~~  231 (263)
                      ..|      ..|+++|+++++|.|.+  |++.|.+...|..|+++|+++.+..
T Consensus       100 ~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~  152 (155)
T 2rpc_A          100 KIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGP  152 (155)
T ss_dssp             CEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSC
T ss_pred             CccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCC
Confidence            876      34889999999999997  9999999999999999999886543

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.73  E-value=4e-19  Score=140.74  Aligned_cols=88  Identities=19%  Similarity=0.229  Sum_probs=62.8

Q ss_pred             hhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccCCCCccc------ccccccccCCcceecCccccccCCch
Q 038614          142 ESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAA------AGGDAVVMDQRVFKCPFCDKVFDSGQ  215 (263)
Q Consensus       142 h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~------~~h~~~h~g~kp~~C~~Cgk~F~~~~  215 (263)
                      +..+|.|+++|+|.+|++.|.....|..|+++|+++++|.|..|+..|      ..|+++|+|++||.|++|++.|.+..
T Consensus        13 ~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~   92 (133)
T 2lt7_A           13 YELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQ   92 (133)
T ss_dssp             EEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHH
T ss_pred             ceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHH
Confidence            445566666666666666666666666666666666666666666554      23566666788999999999999999


Q ss_pred             hhhhHhhhhcCCCC
Q 038614          216 ALGGHKKIHFTYLA  229 (263)
Q Consensus       216 ~L~~H~r~H~~~~~  229 (263)
                      .|..|+++|.++.+
T Consensus        93 ~L~~H~~~hh~~~p  106 (133)
T 2lt7_A           93 FMSSHIKSVHSQDP  106 (133)
T ss_dssp             HHHHHHHHHTCCCT
T ss_pred             HHHHHhHHhcCCCC
Confidence            99999998887644

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.68  E-value=1.4e-17  Score=113.94  Aligned_cols=58  Identities=28%  Similarity=0.551  Sum_probs=54.2

Q ss_pred             CCccccCcccccccChhhhhhhhhhcCCCcccccCCCCcccccccccccCCcceecCccccccCCchhhhhHhhhhcCCC
Q 038614          149 TNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYL  228 (263)
Q Consensus       149 ~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  228 (263)
                      ||||+|.+|++.|.....|..|+++|+                      |++||.|++||+.|.+...|..|+++|+|+-
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht----------------------~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHL----------------------GYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHH----------------------TCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhC----------------------CCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            789999999999999999999999888                      5689999999999999999999999999873

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.68  E-value=4.1e-18  Score=134.92  Aligned_cols=100  Identities=12%  Similarity=0.055  Sum_probs=89.8

Q ss_pred             ceeeccCCccccCCCCCCCcccccchhhhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccCCCCcccc---
Q 038614          114 EAVVDEDEYVRGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAA---  190 (263)
Q Consensus       114 ~~~~~~~~~~~~c~~c~~~~~~~~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~---  190 (263)
                      ...+..++.+|.|..|++.|.....|..|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|..|+..|.   
T Consensus        13 ~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~   92 (133)
T 2lt7_A           13 YELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQ   92 (133)
T ss_dssp             EEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHH
T ss_pred             ceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHH
Confidence            45667888999999999999999999999999999999999999999999999999999999999999999998772   


Q ss_pred             ---cccccccCC------cceecCccccccCC
Q 038614          191 ---GGDAVVMDQ------RVFKCPFCDKVFDS  213 (263)
Q Consensus       191 ---~h~~~h~g~------kp~~C~~Cgk~F~~  213 (263)
                         .|+++|.++      ++|+|.+|++.|..
T Consensus        93 ~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~  124 (133)
T 2lt7_A           93 FMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIR  124 (133)
T ss_dssp             HHHHHHHHHTCCCTTSSSCCEEECCCCSSCCC
T ss_pred             HHHHHhHHhcCCCCCCCCCCeecCCCCchhhh
Confidence               477777665      46999999998854

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.68  E-value=8.5e-18  Score=139.31  Aligned_cols=111  Identities=19%  Similarity=0.208  Sum_probs=97.5

Q ss_pred             eeccCCccccC--CCCCCCcccccchhhhhcccCCCCccccC--cccccccChhhhhhhh-hhc-CCCccccc--CCCCc
Q 038614          116 VVDEDEYVRGK--SDDGDNDEEEDKEEDESSLVSRTNKYKCK--TCKKEFRSYQALGGHK-ASH-KKIKIHHN--GSSDA  187 (263)
Q Consensus       116 ~~~~~~~~~~c--~~c~~~~~~~~~~~~h~~~h~~~kp~kC~--~C~k~F~s~~~L~~H~-~~H-~~~kp~~~--~~~~~  187 (263)
                      ..+.+..++.|  ..|++.|.....|..|+++|.++++|.|.  .|++.|.+...|..|+ +.| .+.++|.|  ..|+.
T Consensus        35 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k  114 (190)
T 1tf6_A           35 CKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGK  114 (190)
T ss_dssp             HHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCE
T ss_pred             HhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCcc
Confidence            34455677899  88999999999999999999999999999  8999999999999998 778 57788998  77888


Q ss_pred             cc------ccccccccCCcceecCc--cccccCCchhhhhHhhhhcC
Q 038614          188 AA------AGGDAVVMDQRVFKCPF--CDKVFDSGQALGGHKKIHFT  226 (263)
Q Consensus       188 ~~------~~h~~~h~g~kp~~C~~--Cgk~F~~~~~L~~H~r~H~~  226 (263)
                      .|      ..|+++|++++||.|++  |++.|.+...|..|+++|++
T Consensus       115 ~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~  161 (190)
T 1tf6_A          115 AFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG  161 (190)
T ss_dssp             ECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred             ccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC
Confidence            76      34888999999999988  99999999999999999987

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.68  E-value=9.2e-18  Score=134.24  Aligned_cols=107  Identities=16%  Similarity=0.152  Sum_probs=91.3

Q ss_pred             CCccccCC-----CCCCCcccccchhhhhcccCCCCccccCc--ccccccChhhhhhhhhhcCCCcccccCC--CCccc-
Q 038614          120 DEYVRGKS-----DDGDNDEEEDKEEDESSLVSRTNKYKCKT--CKKEFRSYQALGGHKASHKKIKIHHNGS--SDAAA-  189 (263)
Q Consensus       120 ~~~~~~c~-----~c~~~~~~~~~~~~h~~~h~~~kp~kC~~--C~k~F~s~~~L~~H~~~H~~~kp~~~~~--~~~~~-  189 (263)
                      +..++.|.     .|++.|.....|..|+++|.++++|.|.+  |++.|.....|..|+++|.++++|.|..  |+..| 
T Consensus        31 ~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~  110 (155)
T 2gli_A           31 ERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFS  110 (155)
T ss_dssp             CSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEES
T ss_pred             CCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccC
Confidence            34455554     45688998888999999999999999985  9999999999999999999999999987  88766 


Q ss_pred             -----cccc-ccccCCcceecCc--cccccCCchhhhhHhhhhcC
Q 038614          190 -----AGGD-AVVMDQRVFKCPF--CDKVFDSGQALGGHKKIHFT  226 (263)
Q Consensus       190 -----~~h~-~~h~g~kp~~C~~--Cgk~F~~~~~L~~H~r~H~~  226 (263)
                           ..|+ ++|.++++|.|++  |++.|.+...|..|+++|.|
T Consensus       111 ~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          111 NASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             SSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence                 2476 7899999999988  99999999999999999875

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.67  E-value=1e-16  Score=122.19  Aligned_cols=92  Identities=22%  Similarity=0.355  Sum_probs=80.5

Q ss_pred             cchhhhhcccCCCCccccCcccccccChhhhhhhhhh--cCCCcccc-cCCCCccc--------ccccccccCCcceecC
Q 038614          137 DKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKAS--HKKIKIHH-NGSSDAAA--------AGGDAVVMDQRVFKCP  205 (263)
Q Consensus       137 ~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~--H~~~kp~~-~~~~~~~~--------~~h~~~h~g~kp~~C~  205 (263)
                      ..|..|+++|+++++|+|.+|++.|.....|..|+++  |.+.+++. |..|+..+        ..|+++|++++||.|+
T Consensus         5 ~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~   84 (115)
T 2dmi_A            5 SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCM   84 (115)
T ss_dssp             CCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCS
T ss_pred             hhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECC
Confidence            4567899999999999999999999999999999999  87777754 77776543        3588999999999999


Q ss_pred             ccccccCCchhhhhHhhhhcCCC
Q 038614          206 FCDKVFDSGQALGGHKKIHFTYL  228 (263)
Q Consensus       206 ~Cgk~F~~~~~L~~H~r~H~~~~  228 (263)
                      +|++.|.+...|..|+++|....
T Consensus        85 ~C~k~f~~~~~L~~H~~~hh~~~  107 (115)
T 2dmi_A           85 YCGHSFESLQDLSVHMIKTKHYQ  107 (115)
T ss_dssp             SSCCBCSSHHHHHHHHHHTTTTT
T ss_pred             CCCCccCCHHHHHHHHHHhCCcc
Confidence            99999999999999999987653

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.66  E-value=9.7e-17  Score=120.44  Aligned_cols=89  Identities=22%  Similarity=0.321  Sum_probs=64.0

Q ss_pred             CccccCCCCCCCcccccchhhhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccCCCCcccccccccccCCc
Q 038614          121 EYVRGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQR  200 (263)
Q Consensus       121 ~~~~~c~~c~~~~~~~~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h~g~k  200 (263)
                      ...+.|..|++.|.....|..|+++|.++++|.|.+|++.|.....|..|+++|.                      +++
T Consensus        15 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~----------------------~~~   72 (106)
T 2ee8_A           15 KKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHS----------------------KEK   72 (106)
T ss_dssp             CCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSC----------------------CCC
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhC----------------------CCC
Confidence            3445666666666666666666666666666666666666666666666655554                      678


Q ss_pred             ceecCccccccCCchhhhhHhhhhcCCCCCC
Q 038614          201 VFKCPFCDKVFDSGQALGGHKKIHFTYLATP  231 (263)
Q Consensus       201 p~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~  231 (263)
                      +|.|.+|++.|.+...|..|+++|.++.+.+
T Consensus        73 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~  103 (106)
T 2ee8_A           73 PFKCQECGKGFCQSRTLAVHKTLHMQTSSPT  103 (106)
T ss_dssp             TTSCSSSCCCCSSHHHHHHHHHHTTSCCCCC
T ss_pred             CeECCCcCCcccCHHHHHHHHHHhCCCCCCc
Confidence            9999999999999999999999999876543

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.66  E-value=1e-16  Score=118.07  Aligned_cols=86  Identities=24%  Similarity=0.300  Sum_probs=64.5

Q ss_pred             CccccCCCCCCCcccccchhhhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccCCCCcccccccccccCCc
Q 038614          121 EYVRGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQR  200 (263)
Q Consensus       121 ~~~~~c~~c~~~~~~~~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h~g~k  200 (263)
                      ..++.|..|++.|.....|..|+++|.++++|.|.+|++.|.....|..|+++|.                      +++
T Consensus         6 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~----------------------~~~   63 (96)
T 2dmd_A            6 SGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHS----------------------DER   63 (96)
T ss_dssp             CCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSC----------------------CCC
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhC----------------------CCC
Confidence            3455666666666666666666666666666666666666666666666666554                      678


Q ss_pred             ceecCccccccCCchhhhhHhhhhcCCC
Q 038614          201 VFKCPFCDKVFDSGQALGGHKKIHFTYL  228 (263)
Q Consensus       201 p~~C~~Cgk~F~~~~~L~~H~r~H~~~~  228 (263)
                      +|.|++|++.|.+...|..|+++|+++.
T Consensus        64 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~   91 (96)
T 2dmd_A           64 PFKCQICPYASRNSSQLTVHLRSHTGDS   91 (96)
T ss_dssp             CEECSSSSCEESSHHHHHHHHTTCCSCC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHhcCCC
Confidence            9999999999999999999999999874

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.63  E-value=1.5e-16  Score=127.09  Aligned_cols=108  Identities=12%  Similarity=0.148  Sum_probs=97.3

Q ss_pred             ccccCCCCCCCcccccchhhhhc---ccCCCCccccCcc-----cccccChhhhhhhhhhcCCCcccccCC--CCccc--
Q 038614          122 YVRGKSDDGDNDEEEDKEEDESS---LVSRTNKYKCKTC-----KKEFRSYQALGGHKASHKKIKIHHNGS--SDAAA--  189 (263)
Q Consensus       122 ~~~~c~~c~~~~~~~~~~~~h~~---~h~~~kp~kC~~C-----~k~F~s~~~L~~H~~~H~~~kp~~~~~--~~~~~--  189 (263)
                      ..+.|..|++.|.....|..|++   +|.++++|.|.+|     ++.|.....|..|+++|.++++|.|.+  |+..+  
T Consensus         2 ~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~   81 (155)
T 2gli_A            2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSR   81 (155)
T ss_dssp             CBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSS
T ss_pred             CcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccC
Confidence            46789999999999999999997   7999999998753     499999999999999999999999986  88776  


Q ss_pred             ----ccccccccCCcceecCc--cccccCCchhhhhHh-hhhcCCCC
Q 038614          190 ----AGGDAVVMDQRVFKCPF--CDKVFDSGQALGGHK-KIHFTYLA  229 (263)
Q Consensus       190 ----~~h~~~h~g~kp~~C~~--Cgk~F~~~~~L~~H~-r~H~~~~~  229 (263)
                          ..|+++|.++++|.|++  |++.|.+...|..|+ ++|.++.+
T Consensus        82 ~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~  128 (155)
T 2gli_A           82 LENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKP  128 (155)
T ss_dssp             HHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCC
T ss_pred             HHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCC
Confidence                34889999999999998  999999999999998 89998754

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.63  E-value=6.7e-17  Score=115.33  Aligned_cols=81  Identities=22%  Similarity=0.356  Sum_probs=69.0

Q ss_pred             ccCCCCCCCcccccchhhhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccCCCCcccccccccccCCccee
Q 038614          124 RGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRVFK  203 (263)
Q Consensus       124 ~~c~~c~~~~~~~~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~  203 (263)
                      +.|..|++.|.....|..|+++|.++++|.|..|++.|.....|..|+++|.                      ++++|.
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~----------------------~~~~~~   59 (82)
T 2kmk_A            2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHT----------------------GEKPHK   59 (82)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHH----------------------TCCCEE
T ss_pred             ccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhc----------------------CCCCCc
Confidence            5678888888888888888888888888888888888888888888877776                      567999


Q ss_pred             cCccccccCCchhhhhHhhhhcC
Q 038614          204 CPFCDKVFDSGQALGGHKKIHFT  226 (263)
Q Consensus       204 C~~Cgk~F~~~~~L~~H~r~H~~  226 (263)
                      |++|++.|.+...|..|+++|+|
T Consensus        60 C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           60 CQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             CTTTSCEESSHHHHHHHHHHHC-
T ss_pred             CCCcchhhCChHHHHHHHHhhCC
Confidence            99999999999999999999975

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.62  E-value=2.4e-16  Score=130.48  Aligned_cols=112  Identities=20%  Similarity=0.189  Sum_probs=99.8

Q ss_pred             cCCccccC--CCCCCCcccccchhhhhcccCCCCcccc--CcccccccChhhhhhhhhhcCCCcccccC--CCCcccc--
Q 038614          119 EDEYVRGK--SDDGDNDEEEDKEEDESSLVSRTNKYKC--KTCKKEFRSYQALGGHKASHKKIKIHHNG--SSDAAAA--  190 (263)
Q Consensus       119 ~~~~~~~c--~~c~~~~~~~~~~~~h~~~h~~~kp~kC--~~C~k~F~s~~~L~~H~~~H~~~kp~~~~--~~~~~~~--  190 (263)
                      .....+.|  ..|++.|.....|..|+++|.++++|.|  ..|++.|.....|..|+++|.++++|.|.  .|+..+.  
T Consensus         8 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~   87 (190)
T 1tf6_A            8 VVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTK   87 (190)
T ss_dssp             --CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCH
T ss_pred             CCCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCH
Confidence            34567889  6899999999999999999999999999  88999999999999999999999999998  8988762  


Q ss_pred             ----ccc-ccc-cCCcceec--CccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 ----GGD-AVV-MDQRVFKC--PFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ----~h~-~~h-~g~kp~~C--~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                          .|+ +.| .+.++|.|  ++|++.|.+...|..|+++|+++.+.
T Consensus        88 ~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~  135 (190)
T 1tf6_A           88 ANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPY  135 (190)
T ss_dssp             HHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSS
T ss_pred             HHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCc
Confidence                476 667 57899999  89999999999999999999987654

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.62  E-value=3.5e-16  Score=114.90  Aligned_cols=88  Identities=20%  Similarity=0.252  Sum_probs=74.9

Q ss_pred             CCccccCCCCCCCcccccchhhhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccCCCCcccccccccccCC
Q 038614          120 DEYVRGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQ  199 (263)
Q Consensus       120 ~~~~~~c~~c~~~~~~~~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h~g~  199 (263)
                      ++.++.|..|++.|.....|..|+++|.++++|.|.+|++.|.....|..|+++|.++                    ..
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--------------------~~   63 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS--------------------VG   63 (95)
T ss_dssp             CCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCC--------------------CC
T ss_pred             CCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCC--------------------CC
Confidence            4566788888888888888888888888888888888888888888888888887753                    14


Q ss_pred             cceecCccccccCCchhhhhHhh-hhcCC
Q 038614          200 RVFKCPFCDKVFDSGQALGGHKK-IHFTY  227 (263)
Q Consensus       200 kp~~C~~Cgk~F~~~~~L~~H~r-~H~~~  227 (263)
                      ++|.|++|++.|.+...|..|++ +|.++
T Consensus        64 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   92 (95)
T 2yt9_A           64 KPYICQSCGKGFSRPDHLNGHIKQVHSGP   92 (95)
T ss_dssp             SSBCCSSSCCCBSSHHHHHHHHHHTSCCC
T ss_pred             CceECCCccchhCCHHHHHHHHHHhcCCC
Confidence            89999999999999999999986 79875

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.61  E-value=1.5e-16  Score=115.66  Aligned_cols=84  Identities=17%  Similarity=0.369  Sum_probs=65.0

Q ss_pred             ccccCC--CCCCCcccccchhhhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccCCCCcccccccccccCC
Q 038614          122 YVRGKS--DDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQ  199 (263)
Q Consensus       122 ~~~~c~--~c~~~~~~~~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h~g~  199 (263)
                      .++.|.  .|+..|.....|..|+++|.++++|.|..|++.|.....|..|+++|.                      ++
T Consensus         3 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~----------------------~~   60 (90)
T 1a1h_A            3 RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT----------------------GE   60 (90)
T ss_dssp             CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHH----------------------CC
T ss_pred             CceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcC----------------------CC
Confidence            345665  577777777777777777777777777777777777777777766665                      57


Q ss_pred             cceecCccccccCCchhhhhHhhhhcCC
Q 038614          200 RVFKCPFCDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       200 kp~~C~~Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      ++|.|++|++.|.+...|..|+++|+++
T Consensus        61 ~~~~C~~C~~~f~~~~~l~~H~~~H~~~   88 (90)
T 1a1h_A           61 KPFACDICGRKFARSDERKRHTKIHLRQ   88 (90)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGGGC-
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhccc
Confidence            8999999999999999999999999875

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.60  E-value=3.9e-16  Score=117.69  Aligned_cols=90  Identities=17%  Similarity=0.290  Sum_probs=69.3

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccCCCCccc------ccccccccCCcceecCccccccCCc
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAA------AGGDAVVMDQRVFKCPFCDKVFDSG  214 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~------~~h~~~h~g~kp~~C~~Cgk~F~~~  214 (263)
                      .++++|+++++|+|.+|++.|.....|..|+++|  .++|.|..|+..|      ..|++ |+++++|.|.+|++.|.+.
T Consensus         6 s~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~   82 (107)
T 1wjp_A            6 SGASPVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSS   82 (107)
T ss_dssp             CCCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSH
T ss_pred             ccCcccCCCcCeECCCCCCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCH
Confidence            3455667777777777777777777777777777  3567777777655      23554 7789999999999999999


Q ss_pred             hhhhhHhh-hhcCCCCCCCc
Q 038614          215 QALGGHKK-IHFTYLATPIT  233 (263)
Q Consensus       215 ~~L~~H~r-~H~~~~~~~~~  233 (263)
                      ..|..|++ +|.++...+++
T Consensus        83 ~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           83 FSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HHHHHHHHHTSCCCCCCCCC
T ss_pred             HHHHHHHHHHcCCCCCCCCC
Confidence            99999997 89887665543

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=6.7e-16  Score=116.71  Aligned_cols=81  Identities=19%  Similarity=0.292  Sum_probs=59.7

Q ss_pred             cCCCCccccCcccccccChhhhhhhhhhcCCCcccccCCCCccc------ccccccccCCcceecCccccccCCchhhhh
Q 038614          146 VSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAA------AGGDAVVMDQRVFKCPFCDKVFDSGQALGG  219 (263)
Q Consensus       146 h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~------~~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~  219 (263)
                      |+++++|.| .|++.|.....|..|++.|.++++|.|..|+..|      ..|+++|.++++|.|++|++.|.....|..
T Consensus         5 h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   83 (110)
T 2csh_A            5 SSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHR   83 (110)
T ss_dssp             CCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHH
T ss_pred             CCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHH
Confidence            556666666 6666666666666666666666666666665544      235566667899999999999999999999


Q ss_pred             HhhhhcCC
Q 038614          220 HKKIHFTY  227 (263)
Q Consensus       220 H~r~H~~~  227 (263)
                      |+++|...
T Consensus        84 H~~~~~~~   91 (110)
T 2csh_A           84 HVTSCTKS   91 (110)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHcccc
Confidence            99998864

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.52  E-value=5.2e-15  Score=107.13  Aligned_cols=81  Identities=23%  Similarity=0.420  Sum_probs=65.6

Q ss_pred             cccCCC--CCCCcccccchhhhhcccCCCCccccC--cccccccChhhhhhhhhhcCCCcccccCCCCcccccccccccC
Q 038614          123 VRGKSD--DGDNDEEEDKEEDESSLVSRTNKYKCK--TCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMD  198 (263)
Q Consensus       123 ~~~c~~--c~~~~~~~~~~~~h~~~h~~~kp~kC~--~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h~g  198 (263)
                      .+.|..  |++.|.....|..|+++|.++++|.|.  .|++.|.....|..|+++|.                      +
T Consensus         5 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~----------------------~   62 (89)
T 2wbs_A            5 THTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT----------------------G   62 (89)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHH----------------------C
T ss_pred             CeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcC----------------------C
Confidence            456766  777777777777777777777777776  47777777777777777665                      5


Q ss_pred             CcceecCccccccCCchhhhhHhhhhc
Q 038614          199 QRVFKCPFCDKVFDSGQALGGHKKIHF  225 (263)
Q Consensus       199 ~kp~~C~~Cgk~F~~~~~L~~H~r~H~  225 (263)
                      +++|.|++|++.|.+...|..|+++|+
T Consensus        63 ~~~~~C~~C~~~f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           63 HRPFQCQKCDRAFSRSDHLALHMKRHF   89 (89)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHGGGGC
T ss_pred             CCCccCCCCCcccCCHHHHHHHHHhhC
Confidence            689999999999999999999999995

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.52  E-value=5.5e-15  Score=109.34  Aligned_cols=82  Identities=20%  Similarity=0.329  Sum_probs=60.6

Q ss_pred             cccCCC--CCCCcccccchhhhhcccCCCCccccC--cccccccChhhhhhhhhhcCCCcccccCCCCcccccccccccC
Q 038614          123 VRGKSD--DGDNDEEEDKEEDESSLVSRTNKYKCK--TCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMD  198 (263)
Q Consensus       123 ~~~c~~--c~~~~~~~~~~~~h~~~h~~~kp~kC~--~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h~g  198 (263)
                      .+.|..  |++.|.....|..|+++|.++++|.|.  .|++.|.....|..|+++|.                      +
T Consensus        15 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~----------------------~   72 (100)
T 2ebt_A           15 IHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHT----------------------G   72 (100)
T ss_dssp             CEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHT----------------------S
T ss_pred             ceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhC----------------------C
Confidence            445553  666666666666666666666666664  46666666666666666555                      6


Q ss_pred             CcceecCccccccCCchhhhhHhhhhcC
Q 038614          199 QRVFKCPFCDKVFDSGQALGGHKKIHFT  226 (263)
Q Consensus       199 ~kp~~C~~Cgk~F~~~~~L~~H~r~H~~  226 (263)
                      +++|.|++|++.|.....|..|+++|++
T Consensus        73 ~~~~~C~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           73 AKPFQCGVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             CCSCBCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred             CCCeECCCCcCccCCHHHHHHHHHHhCC
Confidence            7899999999999999999999999975

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=1e-14  Score=102.11  Aligned_cols=66  Identities=29%  Similarity=0.525  Sum_probs=60.0

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccCCCCcccccccccccCCcceecCccccccCCchhhhhH
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVFDSGQALGGH  220 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H  220 (263)
                      .+.++|+++++|+|.+|++.|.....|..|+++|.                      ++++|.|++|++.|.+...|..|
T Consensus         4 ~~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~----------------------~~~~~~C~~C~~~f~~~~~L~~H   61 (72)
T 1x6e_A            4 GSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHT----------------------GEKPYKCLECGKAFSQNSGLINH   61 (72)
T ss_dssp             CCCCTTTTCCCEECSSSCCEESSHHHHHHHHHGGG----------------------CSCCEECSSSCCEESSHHHHHHH
T ss_pred             CCCcccCCCCCccCCCCCCccCCHHHHHHHHHhcC----------------------CCCCeECCCCCcccCCHHHHHHH
Confidence            34567899999999999999999999999998887                      46789999999999999999999


Q ss_pred             hhhhcCCC
Q 038614          221 KKIHFTYL  228 (263)
Q Consensus       221 ~r~H~~~~  228 (263)
                      +++|+++.
T Consensus        62 ~~~H~~~~   69 (72)
T 1x6e_A           62 QRIHTSGP   69 (72)
T ss_dssp             HHHHHSSS
T ss_pred             HHhcCCCC
Confidence            99999864

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.49  E-value=1.2e-14  Score=108.28  Aligned_cols=74  Identities=24%  Similarity=0.345  Sum_probs=65.6

Q ss_pred             ccchhhhhcccCCCCccccCccccccc-ChhhhhhhhhhcCCCcccccCCCCcccccccccccCCcceecCccccccCCc
Q 038614          136 EDKEEDESSLVSRTNKYKCKTCKKEFR-SYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVFDSG  214 (263)
Q Consensus       136 ~~~~~~h~~~h~~~kp~kC~~C~k~F~-s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~~Cgk~F~~~  214 (263)
                      ...+..|+++|+++++|+|.+|++.|. ....|..|+++|.+                     ++++|.|.+|++.|.+.
T Consensus         9 ~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~---------------------~~~~~~C~~C~k~F~~~   67 (98)
T 2gqj_A            9 GGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQK---------------------LQDALKCQHCRKQFKSK   67 (98)
T ss_dssp             CCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHH---------------------HHHHHSCSSSCCCCSCH
T ss_pred             CCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcC---------------------CCCCEECCCCCCccCCH
Confidence            344568999999999999999999999 99999999998874                     15789999999999999


Q ss_pred             hhhhhHhhhhcCCCCC
Q 038614          215 QALGGHKKIHFTYLAT  230 (263)
Q Consensus       215 ~~L~~H~r~H~~~~~~  230 (263)
                      ..|..|+++|+++.+.
T Consensus        68 ~~L~~H~~~h~~~kp~   83 (98)
T 2gqj_A           68 AGLNYHTMAEHSAKPS   83 (98)
T ss_dssp             HHHHHHHHHHSCSCSS
T ss_pred             HHHHHHHHHHcCCCCC
Confidence            9999999999987653

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.48  E-value=1.3e-14  Score=110.57  Aligned_cols=83  Identities=18%  Similarity=0.309  Sum_probs=76.0

Q ss_pred             CCCCccccCc--ccccccChhhhhhhhhhcCCCcccccC--CCCccc------ccccccccCCcceecCccccccCCchh
Q 038614          147 SRTNKYKCKT--CKKEFRSYQALGGHKASHKKIKIHHNG--SSDAAA------AGGDAVVMDQRVFKCPFCDKVFDSGQA  216 (263)
Q Consensus       147 ~~~kp~kC~~--C~k~F~s~~~L~~H~~~H~~~kp~~~~--~~~~~~------~~h~~~h~g~kp~~C~~Cgk~F~~~~~  216 (263)
                      +++++|.|..  |++.|.....|..|+++|.++++|.|.  .|+..+      ..|+++|.++++|.|++|++.|.+...
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   81 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDH   81 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHH
Confidence            4788999997  999999999999999999999999998  588776      348889999999999999999999999


Q ss_pred             hhhHhhhhcCCCC
Q 038614          217 LGGHKKIHFTYLA  229 (263)
Q Consensus       217 L~~H~r~H~~~~~  229 (263)
                      |..|+++|.++.+
T Consensus        82 l~~H~~~h~~~~~   94 (119)
T 2jp9_A           82 LKTHTRTHTGEKP   94 (119)
T ss_dssp             HHHHHHHHHTCCC
T ss_pred             HHHHHHHhcCCCC
Confidence            9999999998754

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=4.2e-14  Score=98.35  Aligned_cols=65  Identities=28%  Similarity=0.377  Sum_probs=59.0

Q ss_pred             ccCCCCccccCcccccccChhhhhhhhhhcCCCcccccCCCCcccccccccccCCcceecCccccccCCchhhhhHhhhh
Q 038614          145 LVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIH  224 (263)
Q Consensus       145 ~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H  224 (263)
                      .|+++++|+|.+|++.|.....|..|+++|.                      ++++|.|++|++.|.....|..|+++|
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~----------------------~~~~~~C~~C~~~f~~~~~L~~H~~~h   60 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHC----------------------TDRPFKCNYCSFDTKQPSNLSKHMKKF   60 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGC----------------------CSCSEECSSSSCEESSHHHHHHHHHHH
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcC----------------------CCCCEeCCCCCCccCCHHHHHHHHHHH
Confidence            3678899999999999999999999998887                      467899999999999999999999999


Q ss_pred             cCCCCCC
Q 038614          225 FTYLATP  231 (263)
Q Consensus       225 ~~~~~~~  231 (263)
                      .++.+.+
T Consensus        61 ~~~~p~p   67 (70)
T 1x5w_A           61 HGDMSGP   67 (70)
T ss_dssp             HSSSCCS
T ss_pred             hCCCCCC
Confidence            9986654

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.47  E-value=4.2e-14  Score=108.30  Aligned_cols=83  Identities=24%  Similarity=0.334  Sum_probs=74.8

Q ss_pred             CCCCccccCcccccccChhhhhhhhhhcCCCcccccCCCCcccc------cccc---cccCCcceecCccccccCCchhh
Q 038614          147 SRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAA------GGDA---VVMDQRVFKCPFCDKVFDSGQAL  217 (263)
Q Consensus       147 ~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~------~h~~---~h~g~kp~~C~~Cgk~F~~~~~L  217 (263)
                      +++++|+|..|++.|.....|..|+++|.++++|.|..|+..+.      .|++   .+.++++|.|++|++.|.+...|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l   82 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL   82 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHH
Confidence            57789999999999999999999999999999999999998762      3665   35789999999999999999999


Q ss_pred             hhHhhhhcCCCC
Q 038614          218 GGHKKIHFTYLA  229 (263)
Q Consensus       218 ~~H~r~H~~~~~  229 (263)
                      ..|+++|.++.+
T Consensus        83 ~~H~~~h~~~~~   94 (124)
T 2dlq_A           83 RLHMVSHTGEMP   94 (124)
T ss_dssp             HHHHHHHSSSCS
T ss_pred             HHHHHHcCCCCC
Confidence            999999998754

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.44  E-value=9.4e-14  Score=97.58  Aligned_cols=62  Identities=27%  Similarity=0.619  Sum_probs=56.3

Q ss_pred             ccCCCCccccCcccccccChhhhhhhhhhcCCCcccccCCCCcccccccccccCCcceecCccccccCCchhhhhHhhhh
Q 038614          145 LVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIH  224 (263)
Q Consensus       145 ~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H  224 (263)
                      .+.++++|+|..|++.|.....|..|+++|.                      ++++|.|.+|++.|.....|..|+++|
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~----------------------~~~~~~C~~C~k~f~~~~~L~~H~~~H   68 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHT----------------------GEKPYRCNICGAQFNRPANLKTHTRIH   68 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHC----------------------CCCSEECTTTCCEESCHHHHHHHHHHH
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcC----------------------CCCCEECCCCCchhCCHHHHHHHHHhc
Confidence            3567899999999999999999999999887                      467899999999999999999999999


Q ss_pred             cCCC
Q 038614          225 FTYL  228 (263)
Q Consensus       225 ~~~~  228 (263)
                      +++.
T Consensus        69 ~~~k   72 (74)
T 2lce_A           69 SGEK   72 (74)
T ss_dssp             CCSC
T ss_pred             CCCC
Confidence            9864

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.44  E-value=2.2e-14  Score=97.97  Aligned_cols=58  Identities=16%  Similarity=0.103  Sum_probs=55.0

Q ss_pred             CccccCCCCCCCcccccchhhhhcccCCCCccccCcccccccChhhhhhhhhhcCCCc
Q 038614          121 EYVRGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIK  178 (263)
Q Consensus       121 ~~~~~c~~c~~~~~~~~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~k  178 (263)
                      +.+|.|..|++.|.....|..|+++|++++||+|.+||+.|.+...|..|+++|+|++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            4689999999999999999999999999999999999999999999999999999874

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=1.2e-13  Score=97.82  Aligned_cols=68  Identities=25%  Similarity=0.503  Sum_probs=60.3

Q ss_pred             hhhhhcccCCCCccccCcccccccChhhhhhhhh-hcCCCcccccCCCCcccccccccccCCcceecCccccccCCchhh
Q 038614          139 EEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKA-SHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVFDSGQAL  217 (263)
Q Consensus       139 ~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~-~H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~~Cgk~F~~~~~L  217 (263)
                      +..|+++|+++++|+|.+|++.|.....|..|++ .|.++                     .++|.|++|++.|.....|
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~---------------------~~~~~C~~C~~~f~~~~~L   61 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN---------------------VAKFHCPHCDTVIARKSDL   61 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSS---------------------CSSEECSSSSCEESSHHHH
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCC---------------------CCccCCCCCCCccCCHHHH
Confidence            4579999999999999999999999999999987 56531                     4799999999999999999


Q ss_pred             hhHhhhhcCC
Q 038614          218 GGHKKIHFTY  227 (263)
Q Consensus       218 ~~H~r~H~~~  227 (263)
                      ..|+++|.+.
T Consensus        62 ~~H~~~~H~~   71 (77)
T 2ct1_A           62 GVHLRKQHSY   71 (77)
T ss_dssp             HHHHHHTSCC
T ss_pred             HHHHHHhCCC
Confidence            9999987654

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=8.2e-14  Score=98.80  Aligned_cols=67  Identities=25%  Similarity=0.470  Sum_probs=57.9

Q ss_pred             ccCCCCccccCcccccccChhhhhhhhhhcCCCcccccCCCCcccccccccccCCcceecCccccccCCchhhhhHh-hh
Q 038614          145 LVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVFDSGQALGGHK-KI  223 (263)
Q Consensus       145 ~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~-r~  223 (263)
                      +|+++++|+|.+|++.|.....|..|+++|.+..                   ++++|.|.+|++.|.....|..|+ +.
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~-------------------~~~~~~C~~C~k~f~~~~~L~~H~~~~   61 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETV-------------------AALRFPCEFCGKRFEKPDSVAAHRSKS   61 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHT-------------------TTCCEECTTTCCEESSHHHHHHHHHHT
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccC-------------------CCcccCCCCCCchhCCHHHHHHHHHHh
Confidence            3789999999999999999999999999988521                   368999999999999999999999 56


Q ss_pred             hcCCCCC
Q 038614          224 HFTYLAT  230 (263)
Q Consensus       224 H~~~~~~  230 (263)
                      |.+..+.
T Consensus        62 H~~~~~~   68 (78)
T 2d9h_A           62 HPALLLA   68 (78)
T ss_dssp             STTTSSC
T ss_pred             CCCCCCC
Confidence            7666543

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.41  E-value=1.3e-13  Score=100.65  Aligned_cols=64  Identities=27%  Similarity=0.392  Sum_probs=57.0

Q ss_pred             hhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccCCCCcccccccccccCCcceecCccccccCCchhhhhHh
Q 038614          142 ESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVFDSGQALGGHK  221 (263)
Q Consensus       142 h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~  221 (263)
                      ...++...++|.|.+|++.|.....|..|+++|+                      +++||.|++|++.|.+...|..|+
T Consensus        19 ~~~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~----------------------~~k~~~C~~C~k~F~~~~~L~~H~   76 (85)
T 2lv2_A           19 VLGLSASAECHLCPVCGESFASKGAQERHLRLLH----------------------AAQVFPCKYCPATFYSSPGLTRHI   76 (85)
T ss_dssp             CCSSCCCCTTEECTTSCCEESSHHHHHHHHHTTS----------------------CSSSEECTTSSCEESSHHHHHHHH
T ss_pred             CCCCCCCCCCEECCCCCCCcCcHHHHhhhhhhcc----------------------CCCccCCCCCCCEeCCHHHHHHhC
Confidence            3455778899999999999999999999999887                      467999999999999999999996


Q ss_pred             -hhhcCC
Q 038614          222 -KIHFTY  227 (263)
Q Consensus       222 -r~H~~~  227 (263)
                       ++|.++
T Consensus        77 ~~~H~~E   83 (85)
T 2lv2_A           77 NKCHPSE   83 (85)
T ss_dssp             HTTCTTC
T ss_pred             cccCcCC
Confidence             679876

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=2e-13  Score=101.74  Aligned_cols=74  Identities=22%  Similarity=0.284  Sum_probs=65.2

Q ss_pred             CCcccccchhhhhcccCCCCccccCcccccc-cChhhhhhhhhhcCCCcccccCCCCcccccccccccCCcceecCcccc
Q 038614          131 DNDEEEDKEEDESSLVSRTNKYKCKTCKKEF-RSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDK  209 (263)
Q Consensus       131 ~~~~~~~~~~~h~~~h~~~kp~kC~~C~k~F-~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~~Cgk  209 (263)
                      ..+.....+..|.+++.++++|+|.+|++.| .....|..|+++| +                      +++|.|.+|++
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~----------------------~k~~~C~~Cgk   70 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-K----------------------QEMFTCHHCGK   70 (96)
T ss_dssp             CSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-C----------------------CCCCCCSSSCC
T ss_pred             CCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-C----------------------CCCeECCCCCC
Confidence            3455566677888889999999999999999 9999999999888 5                      46899999999


Q ss_pred             ccCCchhhhhH-hhhhcCC
Q 038614          210 VFDSGQALGGH-KKIHFTY  227 (263)
Q Consensus       210 ~F~~~~~L~~H-~r~H~~~  227 (263)
                      .|.....|..| +++|++.
T Consensus        71 ~F~~~~~L~~H~~~~H~~~   89 (96)
T 2ctd_A           71 QLRSLAGMKYHVMANHNSL   89 (96)
T ss_dssp             CCSSHHHHHHHHHHHTCCC
T ss_pred             eeCCHHHHHHHhHHhcCCC
Confidence            99999999999 9999864

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=3.1e-13  Score=96.98  Aligned_cols=75  Identities=20%  Similarity=0.313  Sum_probs=65.0

Q ss_pred             hhhhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccCCCCcccccccccccCCcceecCccccccCCchhhh
Q 038614          139 EEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVFDSGQALG  218 (263)
Q Consensus       139 ~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~~Cgk~F~~~~~L~  218 (263)
                      +..|+++|+++++|.|.+|++.|.....|..|++.|....                  ..+++|.|.+|++.|.....|.
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~------------------~~~~~~~C~~C~~~f~~~~~L~   64 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN------------------FVPAAFVCSKCGKTFTRRNTMA   64 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS------------------CCCCCEECSSSCCEESCHHHHH
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCc------------------CCCcceECCCCCChhCCHHHHH
Confidence            4579999999999999999999999999999998776431                  0247999999999999999999


Q ss_pred             hHhhhhcCCCCCC
Q 038614          219 GHKKIHFTYLATP  231 (263)
Q Consensus       219 ~H~r~H~~~~~~~  231 (263)
                      .|+++|.++.+..
T Consensus        65 ~H~~~h~~~~~~~   77 (86)
T 1x6h_A           65 RHADNCAGPDGVE   77 (86)
T ss_dssp             HHHHHCCCCCSCC
T ss_pred             HHHHHccCCCCcc
Confidence            9999999876543

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.39  E-value=1.4e-13  Score=94.39  Aligned_cols=62  Identities=27%  Similarity=0.624  Sum_probs=55.8

Q ss_pred             cccCCCCccccCcccccccChhhhhhhhhh-cCCCcccccCCCCcccccccccccCCcceecCccccccCCchhhhhHhh
Q 038614          144 SLVSRTNKYKCKTCKKEFRSYQALGGHKAS-HKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVFDSGQALGGHKK  222 (263)
Q Consensus       144 ~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~-H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r  222 (263)
                      ++|+++++|.|..|++.|.....|..|++. |..                     ++++|.|++|++.|.+...|..|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~---------------------~~~~~~C~~C~k~f~~~~~L~~H~~   61 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKR---------------------NVKVYPCPFCFKEFTRKDNMTAHVK   61 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSS---------------------SCCCEECTTTCCEESCHHHHHHHHH
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCC---------------------CCcCeECCCCCCccCCHHHHHHHHH
Confidence            468899999999999999999999999987 621                     4689999999999999999999999


Q ss_pred             hhcC
Q 038614          223 IHFT  226 (263)
Q Consensus       223 ~H~~  226 (263)
                      +|.+
T Consensus        62 ~~H~   65 (66)
T 2drp_A           62 IIHK   65 (66)
T ss_dssp             HHTC
T ss_pred             HHcC
Confidence            9875

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.39  E-value=3.4e-13  Score=95.40  Aligned_cols=64  Identities=28%  Similarity=0.556  Sum_probs=57.0

Q ss_pred             cccCCCCccccCcccccccChhhhhhhhhhcCCCcccccCCCCcccccccccccCCcceecCccccccCCchhhhhHhhh
Q 038614          144 SLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKI  223 (263)
Q Consensus       144 ~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~  223 (263)
                      ..+.++++|+|.+|++.|.....|..|+++|.                      ++++|.|++|++.|.....|..|+++
T Consensus        11 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~----------------------~~~~~~C~~C~~~f~~~~~L~~H~~~   68 (77)
T 2cot_A           11 WQQRERRRYKCDECGKSFSHSSDLSKHRRTHT----------------------GEKPYKCDECGKAFIQRSHLIGHHRV   68 (77)
T ss_dssp             SCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTC----------------------CSCSEECSSSCCEESSHHHHHHHGGG
T ss_pred             CcCCCCCCEECCCCCcccCCHHHHHHHHHHcC----------------------CCcCeeCCCCCCccCCHHHHHHHHHH
Confidence            34667899999999999999999999988887                      46789999999999999999999999


Q ss_pred             hcCCCC
Q 038614          224 HFTYLA  229 (263)
Q Consensus       224 H~~~~~  229 (263)
                      |+++.+
T Consensus        69 H~~~~p   74 (77)
T 2cot_A           69 HTGSGP   74 (77)
T ss_dssp             SCCCCC
T ss_pred             hCCCCC
Confidence            998754

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.38  E-value=7.9e-14  Score=111.40  Aligned_cols=83  Identities=16%  Similarity=0.119  Sum_probs=77.7

Q ss_pred             cccCCCCCCCcccccchhhhhcccCCCCccccCc--ccccccChhhhhhhhhhcCCCcccccCC--CCccc------ccc
Q 038614          123 VRGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKT--CKKEFRSYQALGGHKASHKKIKIHHNGS--SDAAA------AGG  192 (263)
Q Consensus       123 ~~~c~~c~~~~~~~~~~~~h~~~h~~~kp~kC~~--C~k~F~s~~~L~~H~~~H~~~kp~~~~~--~~~~~------~~h  192 (263)
                      .+.|..|++.|.....|..|+++|.++++|.|.+  |++.|.....|..|+++|.++++|.|.+  |+..|      ..|
T Consensus        62 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H  141 (155)
T 2rpc_A           62 WEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKH  141 (155)
T ss_dssp             BTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHS
T ss_pred             ccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHH
Confidence            4789999999999999999999999999999998  9999999999999999999999999997  98876      359


Q ss_pred             cccccCCcceecC
Q 038614          193 DAVVMDQRVFKCP  205 (263)
Q Consensus       193 ~~~h~g~kp~~C~  205 (263)
                      +++|++++||.|.
T Consensus       142 ~~~H~~~k~~~c~  154 (155)
T 2rpc_A          142 MHVHTSDKSGPSS  154 (155)
T ss_dssp             STTTTSCCCSCSC
T ss_pred             HHHhcCCCCCCCC
Confidence            9999999999996

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.38  E-value=2.1e-13  Score=90.54  Aligned_cols=57  Identities=28%  Similarity=0.505  Sum_probs=48.9

Q ss_pred             CCCccccCcccccccChhhhhhhhhhcCCCcccccCCCCcccccccccccCCcceecCccccccCCchhhhhHhhhhcC
Q 038614          148 RTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFT  226 (263)
Q Consensus       148 ~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~  226 (263)
                      ++++|+|..|++.|.....|..|+++|.                      +++||.|++|++.|.....|..|+++|.+
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~----------------------~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHT----------------------GEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHH----------------------CCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcC----------------------CCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            4679999999999999999999999887                      46789999999999999999999999863

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.38  E-value=1.2e-13  Score=98.71  Aligned_cols=77  Identities=17%  Similarity=0.212  Sum_probs=67.1

Q ss_pred             ccC--CCCCCCcccccchhhhhcccCCCCccccCc--ccccccChhhhhhhhhhcCCCcccccCCCCcccccccccccCC
Q 038614          124 RGK--SDDGDNDEEEDKEEDESSLVSRTNKYKCKT--CKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQ  199 (263)
Q Consensus       124 ~~c--~~c~~~~~~~~~~~~h~~~h~~~kp~kC~~--C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h~g~  199 (263)
                      +.|  ..|++.|.....|..|+++|.++++|+|..  |++.|.....|..|+++|.                      + 
T Consensus         2 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~----------------------~-   58 (85)
T 2j7j_A            2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHA----------------------G-   58 (85)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHH----------------------S-
T ss_pred             ccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhC----------------------C-
Confidence            567  788888888888888888888888888887  8888888888888888776                      3 


Q ss_pred             cceecCc---cccccCCchhhhhHhhhhc
Q 038614          200 RVFKCPF---CDKVFDSGQALGGHKKIHF  225 (263)
Q Consensus       200 kp~~C~~---Cgk~F~~~~~L~~H~r~H~  225 (263)
                        |.|.+   |++.|.....|..|+++|.
T Consensus        59 --~~C~~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           59 --YPCKKDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             --EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred             --CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence              88999   9999999999999999884

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.37  E-value=3.4e-13  Score=103.54  Aligned_cols=81  Identities=26%  Similarity=0.427  Sum_probs=72.6

Q ss_pred             CCccccC--cccccccChhhhhhhhhhcCCCcccccCCCCccc------ccccccccCCcceecCc--cccccCCchhhh
Q 038614          149 TNKYKCK--TCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAA------AGGDAVVMDQRVFKCPF--CDKVFDSGQALG  218 (263)
Q Consensus       149 ~kp~kC~--~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~------~~h~~~h~g~kp~~C~~--Cgk~F~~~~~L~  218 (263)
                      +++|.|.  .|++.|.+...|..|+++| +.++|.|..|+..+      ..|+++|.++++|.|.+  |++.|.+...|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~   81 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLR   81 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHH
Confidence            5789999  8999999999999999999 88999999999876      34889999999999986  999999999999


Q ss_pred             hHhhhhcCCCCC
Q 038614          219 GHKKIHFTYLAT  230 (263)
Q Consensus       219 ~H~r~H~~~~~~  230 (263)
                      .|+++|.++.+.
T Consensus        82 ~H~~~h~~~~~~   93 (124)
T 1ubd_C           82 THVRIHTGDRPY   93 (124)
T ss_dssp             HHHHHHHCCCCC
T ss_pred             HHHHHhCCCCce
Confidence            999999987644

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.37  E-value=1.9e-14  Score=104.62  Aligned_cols=82  Identities=9%  Similarity=0.013  Sum_probs=68.1

Q ss_pred             ccccCCCCCCCcccccchhhhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccCCCCcccccccccccCCcc
Q 038614          122 YVRGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRV  201 (263)
Q Consensus       122 ~~~~c~~c~~~~~~~~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h~g~kp  201 (263)
                      .++.|..|++.|.....|..|+++|+++++|.|..|++.|.....|..|+++|.                       .++
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~-----------------------~~~   58 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH-----------------------ILP   58 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHT-----------------------HHH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhC-----------------------CCc
Confidence            356788888888888888888888888888888888888888888888877765                       268


Q ss_pred             eecCccccccCCchhhhhHhhhhcC
Q 038614          202 FKCPFCDKVFDSGQALGGHKKIHFT  226 (263)
Q Consensus       202 ~~C~~Cgk~F~~~~~L~~H~r~H~~  226 (263)
                      |.|..|++.|.+...|..|++.+.+
T Consensus        59 ~~c~~C~~~f~~~~~L~~H~~~~h~   83 (88)
T 1llm_C           59 ILEDKVEELLSKNYHLENEVARLKK   83 (88)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHhhhHHHHHHHHH
Confidence            9999999999999999999987543

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.34  E-value=7.1e-13  Score=87.96  Aligned_cols=55  Identities=27%  Similarity=0.551  Sum_probs=51.3

Q ss_pred             ccccCcccccccChhhhhhhhhhcCCCcccccCCCCcccccccccccCCcceecCccccccCCchhhhhHhhhhcCC
Q 038614          151 KYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       151 p~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      ||+|..|++.|.....|..|+++|.                      ++++|.|++|++.|.+...|..|+++|.++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~----------------------~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   55 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHT----------------------DVRPYHCTYCNFSFKTKGNLTKHMKSKAHS   55 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTS----------------------SCCCEECSSSSCEESSHHHHHHHHHSSSSC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcC----------------------CCCCccCCCCCchhcCHHHHHHHHHHhccc
Confidence            6999999999999999999999887                      457899999999999999999999999875

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.32  E-value=1.2e-12  Score=87.89  Aligned_cols=57  Identities=28%  Similarity=0.637  Sum_probs=51.6

Q ss_pred             CccccCcccccccChhhhhhhhhhcCCCcccccCCCCcccccccccccCCcceecCccccccCCchhhhhHh-hhhcCCC
Q 038614          150 NKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVFDSGQALGGHK-KIHFTYL  228 (263)
Q Consensus       150 kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~-r~H~~~~  228 (263)
                      +||+|..|++.|.....|..|+++|.                      ++++|.|++|++.|.+...|..|+ ++|.++.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~----------------------~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~   58 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHT----------------------NEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL   58 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTT----------------------SSCSEECTTTCCEESSHHHHHHHHTTTSCCSS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhC----------------------CCCCccCCCCCCccCCHHHHHHHHHHHcCCcC
Confidence            58999999999999999999999887                      457899999999999999999996 7898753

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.32  E-value=5.6e-13  Score=94.31  Aligned_cols=69  Identities=17%  Similarity=0.208  Sum_probs=51.9

Q ss_pred             ccccCCC--CCCCcccccchhhhhc-ccCCCCccccCc--ccccccChhhhhhhhhhcCCCcccccCCCCcccccccccc
Q 038614          122 YVRGKSD--DGDNDEEEDKEEDESS-LVSRTNKYKCKT--CKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVV  196 (263)
Q Consensus       122 ~~~~c~~--c~~~~~~~~~~~~h~~-~h~~~kp~kC~~--C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h  196 (263)
                      .++.|.-  |++.|.....|..|++ +|+++++|+|.+  |++.|.....|..|+++|.                     
T Consensus         6 ~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~---------------------   64 (79)
T 2dlk_A            6 SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHS---------------------   64 (79)
T ss_dssp             SSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHH---------------------
T ss_pred             CCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhC---------------------
Confidence            4455553  7777777777777777 677777777777  7777777777777777766                     


Q ss_pred             cCCcceecCccccccC
Q 038614          197 MDQRVFKCPFCDKVFD  212 (263)
Q Consensus       197 ~g~kp~~C~~Cgk~F~  212 (263)
                       +++||.|.+|++.|.
T Consensus        65 -~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A           65 -DTRDYICEFSGPSSG   79 (79)
T ss_dssp             -TSCCCSCCSSSCCCC
T ss_pred             -CCCCeeCCCCCCCCC
Confidence             567899999999884

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.30  E-value=1.4e-12  Score=98.34  Aligned_cols=66  Identities=20%  Similarity=0.269  Sum_probs=57.7

Q ss_pred             cCCCCccccCcccccccChhhhhhhhh-hcCCCcccccCCCCcccccccccccCCcceecCccccccCCchhhhhH-hhh
Q 038614          146 VSRTNKYKCKTCKKEFRSYQALGGHKA-SHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVFDSGQALGGH-KKI  223 (263)
Q Consensus       146 h~~~kp~kC~~C~k~F~s~~~L~~H~~-~H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H-~r~  223 (263)
                      .++++||.|..|++.|.....|..|++ +|++.                   ++++||.|.+||+.|.....|..| +++
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~-------------------~~ekpf~C~~Cgk~F~~~~~L~~H~~r~   73 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNV-------------------VLNSSYVCVECNFLTKRYDALSEHNLKY   73 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSC-------------------CCSCCEEETTTTEEESSTHHHHTHHHHT
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCC-------------------CCCCCcCCCCCCcccCCHHHHHHHHHHh
Confidence            468899999999999999999999987 58542                   157899999999999999999999 899


Q ss_pred             hcCCCCC
Q 038614          224 HFTYLAT  230 (263)
Q Consensus       224 H~~~~~~  230 (263)
                      |+++.+.
T Consensus        74 Htgekpy   80 (102)
T 2ghf_A           74 HPGEENF   80 (102)
T ss_dssp             STTCCCE
T ss_pred             cCCCCCe
Confidence            9998654

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.28  E-value=1.6e-12  Score=90.68  Aligned_cols=60  Identities=27%  Similarity=0.599  Sum_probs=54.7

Q ss_pred             cccCCCCccccC--cccccccChhhhhhhhhhcCCCcccccCCCCcccccccccccCCcceecCccccccCCchhhhhHh
Q 038614          144 SLVSRTNKYKCK--TCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVFDSGQALGGHK  221 (263)
Q Consensus       144 ~~h~~~kp~kC~--~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~  221 (263)
                      .++.++++|.|.  .|++.|.....|..|+++|.                      ++++|.|++|++.|.....|..|+
T Consensus        12 ~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~----------------------~~~~~~C~~C~~~f~~~~~l~~H~   69 (73)
T 1f2i_G           12 YVVPKMRPYACPVESCDRRFSRSDELTRHIRIHT----------------------GQKPFQCRICMRNFSRSDHLTTHI   69 (73)
T ss_dssp             CCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHH----------------------CCCCEECTTTCCEESCHHHHHHHH
T ss_pred             ccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhC----------------------CCCCeECCCCCchhCCHHHHHHHH
Confidence            457889999997  59999999999999998887                      467899999999999999999999


Q ss_pred             hhhc
Q 038614          222 KIHF  225 (263)
Q Consensus       222 r~H~  225 (263)
                      ++|+
T Consensus        70 ~~Ht   73 (73)
T 1f2i_G           70 RTHT   73 (73)
T ss_dssp             TTCC
T ss_pred             HhcC
Confidence            9985

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.26  E-value=8.4e-13  Score=99.19  Aligned_cols=85  Identities=13%  Similarity=-0.013  Sum_probs=76.1

Q ss_pred             ccCCccccCCCCCCCcccccchhhhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccCCCCccc------cc
Q 038614          118 DEDEYVRGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAA------AG  191 (263)
Q Consensus       118 ~~~~~~~~c~~c~~~~~~~~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~------~~  191 (263)
                      ..++.++.|..|++.|.....|..|+++|  .++|+|.+|++.|.....|..|++ |.++++|.|..|+..|      ..
T Consensus        11 h~~~~~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~   87 (107)
T 1wjp_A           11 VENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWR   87 (107)
T ss_dssp             CCCCCCCBCTTTCCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHH
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHHH
Confidence            45567899999999999999999999998  479999999999999999999996 9999999999998876      34


Q ss_pred             ccc-cccCCcceecC
Q 038614          192 GDA-VVMDQRVFKCP  205 (263)
Q Consensus       192 h~~-~h~g~kp~~C~  205 (263)
                      |++ +|.++++|.|.
T Consensus        88 H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           88 HQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HHHHTSCCCCCCCCC
T ss_pred             HHHHHcCCCCCCCCC
Confidence            886 89999999886

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.23  E-value=3e-12  Score=89.78  Aligned_cols=64  Identities=13%  Similarity=0.164  Sum_probs=59.4

Q ss_pred             eccCCccccCCCCCCCcccccchhhhhcccCCCCccccCcccccccChhhhhhhhhhcCCCccc
Q 038614          117 VDEDEYVRGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIH  180 (263)
Q Consensus       117 ~~~~~~~~~c~~c~~~~~~~~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~  180 (263)
                      ...+..++.|..|++.|.....|..|+++|+++++|+|.+|++.|.....|..|+++|++++||
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            3445678999999999999999999999999999999999999999999999999999998876

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.23  E-value=5.1e-12  Score=89.25  Aligned_cols=64  Identities=17%  Similarity=0.231  Sum_probs=58.9

Q ss_pred             cCCccccCCCCCCCcccccchhhhhcccCCCCccccCcccccccChhhhhhhhhhcCCCccccc
Q 038614          119 EDEYVRGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHN  182 (263)
Q Consensus       119 ~~~~~~~c~~c~~~~~~~~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~  182 (263)
                      .+..++.|..|++.|.....|..|+++|+++++|+|.+|++.|.....|..|+++|++++||.|
T Consensus        14 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           14 RERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            4467889999999999999999999999999999999999999999999999999998877754

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.18  E-value=4.3e-12  Score=98.30  Aligned_cols=66  Identities=20%  Similarity=0.237  Sum_probs=54.7

Q ss_pred             cchhhhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccCCCCcccccccccccCCcceecCccccccCCchh
Q 038614          137 DKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVFDSGQA  216 (263)
Q Consensus       137 ~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~~Cgk~F~~~~~  216 (263)
                      ..+..|+ .|++++||.|.+|++.|.....|..|+++|  +                      +||.|++|++.|.+...
T Consensus        61 ~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~----------------------~~~~C~~C~k~f~~~~~  115 (129)
T 2wbt_A           61 SYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--E----------------------HTKVCPVCKKEFTSTDS  115 (129)
T ss_dssp             HHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--C----------------------CCCBCTTTCCBCSSHHH
T ss_pred             HHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--C----------------------CCCCCCCCCcccCCHHH
Confidence            3344455 477788888888888888888888887776  2                      57999999999999999


Q ss_pred             hhhHhhhhcCC
Q 038614          217 LGGHKKIHFTY  227 (263)
Q Consensus       217 L~~H~r~H~~~  227 (263)
                      |..|+++|++.
T Consensus       116 l~~H~~~h~~~  126 (129)
T 2wbt_A          116 ALDHVCKKHNI  126 (129)
T ss_dssp             HHHHHHHTTCC
T ss_pred             HHHHHHHHCCc
Confidence            99999999875

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=1.6e-11  Score=84.33  Aligned_cols=57  Identities=25%  Similarity=0.410  Sum_probs=51.7

Q ss_pred             CCCCccccCcccccccChhhhhhhhhhcCCCcccccCCCCcccccccccccCCcceecC-ccccccCCchhhhhHhhhhc
Q 038614          147 SRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCP-FCDKVFDSGQALGGHKKIHF  225 (263)
Q Consensus       147 ~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~-~Cgk~F~~~~~L~~H~r~H~  225 (263)
                      .+++||+|..|++.|. ...|..|+++ +                      +++||.|+ +|++.|.....|..|+++|.
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~-~----------------------~~~p~~C~~~C~k~f~~~~~L~~H~~~hc   61 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ-C----------------------PRLPVACPNQCGVGTVAREDLPGHLKDSC   61 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHH-C----------------------SSSEEECTTCCSCCEEETTTHHHHHHTTS
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHH-c----------------------CCcCccCCcccCcccccHHHHHHHHHhhc
Confidence            4678999999999999 9999999887 5                      46899999 99999999999999999997


Q ss_pred             CC
Q 038614          226 TY  227 (263)
Q Consensus       226 ~~  227 (263)
                      ..
T Consensus        62 ~~   63 (66)
T 2eod_A           62 NT   63 (66)
T ss_dssp             SS
T ss_pred             cc
Confidence            65

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.14  E-value=5e-11  Score=87.18  Aligned_cols=62  Identities=26%  Similarity=0.456  Sum_probs=56.3

Q ss_pred             cCCCCccccCcccccccChhhhhhhhhhcCCCcccccCCCCcccccccccccCCcceecCccccccCCchhhhhHhhhhc
Q 038614          146 VSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHF  225 (263)
Q Consensus       146 h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~  225 (263)
                      +.++++|+|.+|++.|.....|..|+++|.                      ++++|.|++|++.|.+...|..|+++|.
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~----------------------~~~~~~C~~C~~~f~~~~~l~~H~~~h~   60 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHT----------------------GVKPYKCKTCDYAAADSSSLNKHLRIHS   60 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGGCC----------------------CCCSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHhcC----------------------CCCCEeCCCCCCccCCHHHHHHHHHHhC
Confidence            467899999999999999999999988886                      4578999999999999999999999999


Q ss_pred             CCCC
Q 038614          226 TYLA  229 (263)
Q Consensus       226 ~~~~  229 (263)
                      ++.+
T Consensus        61 ~~~~   64 (96)
T 2dmd_A           61 DERP   64 (96)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8754

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=1.2e-11  Score=93.82  Aligned_cols=93  Identities=6%  Similarity=-0.129  Sum_probs=77.5

Q ss_pred             cceeeccCCccccCCCCCCCcccccchhhhhcc--cCCCCccc-cCcccccc--cChhhhhhhhhhcCCCcccccCCCCc
Q 038614          113 AEAVVDEDEYVRGKSDDGDNDEEEDKEEDESSL--VSRTNKYK-CKTCKKEF--RSYQALGGHKASHKKIKIHHNGSSDA  187 (263)
Q Consensus       113 ~~~~~~~~~~~~~c~~c~~~~~~~~~~~~h~~~--h~~~kp~k-C~~C~k~F--~s~~~L~~H~~~H~~~kp~~~~~~~~  187 (263)
                      .+..++.++.++.|..|++.|.....|..|+++  |.+.+++. |.+|++.|  .....|..|+++|.++++|.|..|+.
T Consensus         9 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k   88 (115)
T 2dmi_A            9 LYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGH   88 (115)
T ss_dssp             CCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCC
T ss_pred             hheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCC
Confidence            344566778899999999999999999999998  77777655 99999999  89999999999999999999999998


Q ss_pred             ccc------cccccccCCcceecC
Q 038614          188 AAA------GGDAVVMDQRVFKCP  205 (263)
Q Consensus       188 ~~~------~h~~~h~g~kp~~C~  205 (263)
                      .|.      .|+++|.......++
T Consensus        89 ~f~~~~~L~~H~~~hh~~~~~~~~  112 (115)
T 2dmi_A           89 SFESLQDLSVHMIKTKHYQKVSGP  112 (115)
T ss_dssp             BCSSHHHHHHHHHHTTTTTCSCCC
T ss_pred             ccCCHHHHHHHHHHhCCcccCCCC
Confidence            773      477776665554444

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.13  E-value=2.2e-11  Score=88.15  Aligned_cols=56  Identities=21%  Similarity=0.607  Sum_probs=51.8

Q ss_pred             CCccccCcccccccChhhhhhhhhhcCCCcccccCCCCcccccccccccCCcceecCccccccCCchhhhhHhhhhcC
Q 038614          149 TNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFT  226 (263)
Q Consensus       149 ~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~  226 (263)
                      ++||.|.+|++.|.....|..|+++|.                      +++||.|++|++.|.....|..|+++|.+
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~----------------------~~~~~~C~~C~k~f~~~~~L~~H~~~h~~   56 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHT----------------------GEKPFACDICGRKFARSDERKRHRDIQHI   56 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHH----------------------CCCCEECTTTCCEESSHHHHHHHHHHHTH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcC----------------------CCCCccCCCCCCccCCHHHHHHHHHHhCC
Confidence            478999999999999999999999887                      46789999999999999999999999974

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.12  E-value=1.2e-11  Score=93.17  Aligned_cols=66  Identities=14%  Similarity=-0.012  Sum_probs=58.4

Q ss_pred             cCCccccCCCCCCCcccccchhhhhc-cc---CCCCccccCcccccccChhhhhhh-hhhcCCCcccccCC
Q 038614          119 EDEYVRGKSDDGDNDEEEDKEEDESS-LV---SRTNKYKCKTCKKEFRSYQALGGH-KASHKKIKIHHNGS  184 (263)
Q Consensus       119 ~~~~~~~c~~c~~~~~~~~~~~~h~~-~h---~~~kp~kC~~C~k~F~s~~~L~~H-~~~H~~~kp~~~~~  184 (263)
                      .++.+|.|..|++.|.....|..|++ +|   ++++||+|.+|++.|.....|..| +++|++++||.|..
T Consensus        14 ~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~   84 (102)
T 2ghf_A           14 KVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTM   84 (102)
T ss_dssp             CCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEE
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCc
Confidence            45678999999999999999999997 58   668999999999999999999999 89999877766554

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.12  E-value=1.1e-11  Score=93.27  Aligned_cols=72  Identities=18%  Similarity=0.235  Sum_probs=66.9

Q ss_pred             ccCCccccCCCCCCCcccccchhhhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccCCCCcccc
Q 038614          118 DEDEYVRGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAA  190 (263)
Q Consensus       118 ~~~~~~~~c~~c~~~~~~~~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~  190 (263)
                      +.+..++.| .|++.|.....|..|+++|.++++|+|.+|++.|.....|..|+++|.++++|.|..|+..|.
T Consensus         5 h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   76 (110)
T 2csh_A            5 SSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFM   76 (110)
T ss_dssp             CCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEES
T ss_pred             CCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhc
Confidence            345678899 999999999999999999999999999999999999999999999999999999999998773

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.11  E-value=8.1e-11  Score=82.99  Aligned_cols=63  Identities=32%  Similarity=0.520  Sum_probs=55.8

Q ss_pred             CCCCccccCc--ccccccChhhhhhhhh-hcCCCcccccCCCCcccccccccccCCcceecCc--cccccCCchhhhhHh
Q 038614          147 SRTNKYKCKT--CKKEFRSYQALGGHKA-SHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPF--CDKVFDSGQALGGHK  221 (263)
Q Consensus       147 ~~~kp~kC~~--C~k~F~s~~~L~~H~~-~H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~~--Cgk~F~~~~~L~~H~  221 (263)
                      +++++|.|..  |++.|.....|..|++ +|.                      ++++|.|++  |++.|.+...|..|+
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~----------------------~~~~~~C~~~~C~k~f~~~~~L~~H~   60 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHI----------------------HQKSFSCPEPACGKSFNFKKHLKEHM   60 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGG----------------------SCCCEECSCTTTCCEESSHHHHHHHH
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhC----------------------CCCCeECCCCCCcCccCCHHHHHHHH
Confidence            5678999997  9999999999999988 676                      467899999  999999999999999


Q ss_pred             hhhcCCCCCC
Q 038614          222 KIHFTYLATP  231 (263)
Q Consensus       222 r~H~~~~~~~  231 (263)
                      ++|+++.+..
T Consensus        61 ~~H~~~~~~~   70 (79)
T 2dlk_A           61 KLHSDTRDYI   70 (79)
T ss_dssp             HHHHTSCCCS
T ss_pred             HHhCCCCCee
Confidence            9999876543

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.09  E-value=6.2e-11  Score=86.50  Aligned_cols=59  Identities=29%  Similarity=0.545  Sum_probs=54.6

Q ss_pred             CCCCccccCcccccccChhhhhhhhhhcCCCcccccCCCCcccccccccccCCcceecCccccccCCchhhhhHhhhhcC
Q 038614          147 SRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFT  226 (263)
Q Consensus       147 ~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~  226 (263)
                      +++++|.|.+|++.|.....|..|+++|.                      ++++|.|++|++.|.+...|..|+++|.+
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~----------------------~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   60 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHS----------------------GEKPYSCPVCGLRFKRKDRMSYHVRSHDG   60 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSC----------------------SSCSEECSSSCCEESCHHHHHHHHHHHCC
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcC----------------------CCCCCcCCCCCCccCCHHHHHHHHHHhcC
Confidence            57889999999999999999999999887                      45789999999999999999999999998


Q ss_pred             C
Q 038614          227 Y  227 (263)
Q Consensus       227 ~  227 (263)
                      .
T Consensus        61 ~   61 (95)
T 2yt9_A           61 S   61 (95)
T ss_dssp             C
T ss_pred             C
Confidence            6

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.08  E-value=5.9e-11  Score=82.47  Aligned_cols=57  Identities=26%  Similarity=0.646  Sum_probs=51.4

Q ss_pred             cCCCCccccCc--ccccccChhhhhhhhhhcCCCcccccCCCCcccccccccccCCcceecCc--cccccCCchhhhhHh
Q 038614          146 VSRTNKYKCKT--CKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPF--CDKVFDSGQALGGHK  221 (263)
Q Consensus       146 h~~~kp~kC~~--C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~~--Cgk~F~~~~~L~~H~  221 (263)
                      +...++|.|..  |++.|.....|..|+++|.                      +++||.|.+  |++.|.....|..|+
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~----------------------~~~~~~C~~~~C~k~f~~~~~l~~H~   69 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHT----------------------GEKPFSCSWKGCERRFARSDELSRHR   69 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHS----------------------SSCSEECCCTTCCCEESSHHHHHHHT
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcC----------------------CCCCccCCCCCCCcccCCHHHHHhHh
Confidence            56778999998  9999999999999999887                      467899965  999999999999999


Q ss_pred             hhh
Q 038614          222 KIH  224 (263)
Q Consensus       222 r~H  224 (263)
                      ++|
T Consensus        70 ~~H   72 (72)
T 2epa_A           70 RTH   72 (72)
T ss_dssp             TTC
T ss_pred             hcC
Confidence            987

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.08  E-value=3e-11  Score=83.62  Aligned_cols=62  Identities=10%  Similarity=0.060  Sum_probs=57.7

Q ss_pred             cCCccccCCCCCCCcccccchhhhhcccCCCCccccCcccccccChhhhhhhhhhcCCCccc
Q 038614          119 EDEYVRGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIH  180 (263)
Q Consensus       119 ~~~~~~~c~~c~~~~~~~~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~  180 (263)
                      .++.++.|..|++.|.....|..|+++|+++++|+|.+|++.|.....|..|+++|.+++|.
T Consensus         5 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            5 SSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             CCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            45678899999999999999999999999999999999999999999999999999988764

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.06  E-value=6.2e-11  Score=78.36  Aligned_cols=56  Identities=16%  Similarity=0.204  Sum_probs=52.9

Q ss_pred             cccCCCCCCCcccccchhhhhcccCCCCccccCcccccccChhhhhhhhhhcCCCc
Q 038614          123 VRGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIK  178 (263)
Q Consensus       123 ~~~c~~c~~~~~~~~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~k  178 (263)
                      ++.|..|++.|.....|..|+++|+++++|.|..|++.|.....|..|+++|.+++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            36899999999999999999999999999999999999999999999999998765

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.05  E-value=7.1e-11  Score=84.46  Aligned_cols=67  Identities=10%  Similarity=0.076  Sum_probs=56.6

Q ss_pred             ceeeccCCccccCCCCCCCcccccchhhhhcccCCC----CccccCcccccccChhhhhhhhhhcCCCccc
Q 038614          114 EAVVDEDEYVRGKSDDGDNDEEEDKEEDESSLVSRT----NKYKCKTCKKEFRSYQALGGHKASHKKIKIH  180 (263)
Q Consensus       114 ~~~~~~~~~~~~c~~c~~~~~~~~~~~~h~~~h~~~----kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~  180 (263)
                      +..++.++.++.|..|++.|.....|..|++.|...    ++|+|.+|++.|.....|..|+++|.+++++
T Consensus         6 H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~   76 (86)
T 1x6h_A            6 SGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGV   76 (86)
T ss_dssp             CSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSC
T ss_pred             ccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCc
Confidence            334556678899999999999999999998776654    7999999999999999999999999865433

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.05  E-value=3.9e-11  Score=89.46  Aligned_cols=66  Identities=21%  Similarity=0.253  Sum_probs=60.3

Q ss_pred             eeccCCccccCCCCCCCcccccchhhhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccc
Q 038614          116 VVDEDEYVRGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHH  181 (263)
Q Consensus       116 ~~~~~~~~~~c~~c~~~~~~~~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~  181 (263)
                      ..+.+..++.|..|++.|.....|..|+++|.++++|+|.+|++.|.....|..|+++|.++++|.
T Consensus        38 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~  103 (106)
T 2ee8_A           38 RTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPT  103 (106)
T ss_dssp             HHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHHTTSCCCCC
T ss_pred             HHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHHhCCCCCCc
Confidence            344556788999999999999999999999999999999999999999999999999999988774

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.04  E-value=6.1e-11  Score=86.38  Aligned_cols=60  Identities=18%  Similarity=0.238  Sum_probs=54.7

Q ss_pred             cCCccccCCCCCCCcccccchhhhhcccCCCCccccCcccccccChhhhhhhh-hhcCCCc
Q 038614          119 EDEYVRGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHK-ASHKKIK  178 (263)
Q Consensus       119 ~~~~~~~c~~c~~~~~~~~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~-~~H~~~k  178 (263)
                      .....+.|..|++.|.....|..|+++|++++||+|.+|++.|.....|..|+ ++|.++.
T Consensus        24 ~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           24 ASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            34567899999999999999999999999999999999999999999999995 6798763

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.04  E-value=1.1e-10  Score=76.95  Aligned_cols=48  Identities=31%  Similarity=0.474  Sum_probs=42.2

Q ss_pred             ccCCCCccccCcccccccChhhhhhhhh-hcCCCcccccCCCCcccccccccccCCcceecCccccccCCc
Q 038614          145 LVSRTNKYKCKTCKKEFRSYQALGGHKA-SHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVFDSG  214 (263)
Q Consensus       145 ~h~~~kp~kC~~C~k~F~s~~~L~~H~~-~H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~~Cgk~F~~~  214 (263)
                      .|+++++|.|.+|++.|.....|..|++ +|.                      +++||.|.+|++.|.++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~----------------------~~k~~~C~~C~k~F~~~   54 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHT----------------------SERPHKCQVWVSGPSSG   54 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSC----------------------CCCCCCSSSSCCSSCCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcC----------------------CCCCccCCCCCCCCCCC
Confidence            3678899999999999999999999986 787                      46789999999999764

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.03  E-value=2.6e-11  Score=82.52  Aligned_cols=57  Identities=18%  Similarity=0.402  Sum_probs=47.0

Q ss_pred             hhhhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccCCCCcccccccccccCCcceecCccccccCCchhhh
Q 038614          139 EEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVFDSGQALG  218 (263)
Q Consensus       139 ~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~~Cgk~F~~~~~L~  218 (263)
                      |..|+++|++++||+|..|++.|.....|.   ++|.                      +++||.|++|++.|.....+.
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~----------------------~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDP----------------------MTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEET----------------------TTTEEBCSSSCCBCEECTTCS
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcC----------------------CCCCEECCCCCCccccCcccc
Confidence            457888999999999999999999888775   4554                      678999999999998877665


Q ss_pred             hH
Q 038614          219 GH  220 (263)
Q Consensus       219 ~H  220 (263)
                      .+
T Consensus        57 ~~   58 (62)
T 1vd4_A           57 PK   58 (62)
T ss_dssp             CC
T ss_pred             cc
Confidence            43

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=2.7e-11  Score=83.88  Aligned_cols=64  Identities=16%  Similarity=0.170  Sum_probs=48.8

Q ss_pred             cchhhhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccCCCCcccccccccccCCcceecCccccccCCchh
Q 038614          137 DKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVFDSGQA  216 (263)
Q Consensus       137 ~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~~Cgk~F~~~~~  216 (263)
                      ..|..|+++|.++++|.|.+|++.|.....|..                             +++|.|++|++.|.....
T Consensus         4 ~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-----------------------------~~~~~C~~C~~~f~~~~~   54 (73)
T 2ctu_A            4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-----------------------------RKTPMCEKCRKDSCQEAA   54 (73)
T ss_dssp             CSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-----------------------------SSSCCCHHHHHTCSCCCS
T ss_pred             hhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-----------------------------CCCCCCCCCChhhcCHHH
Confidence            345678888888888999999988888776654                             357777777777777777


Q ss_pred             hhhHhhhhcCCCC
Q 038614          217 LGGHKKIHFTYLA  229 (263)
Q Consensus       217 L~~H~r~H~~~~~  229 (263)
                      |..|+++|+++.+
T Consensus        55 l~~H~~~H~~~~~   67 (73)
T 2ctu_A           55 LNKDEGNESGKKT   67 (73)
T ss_dssp             SCCCSSCCCCCCC
T ss_pred             HHHHHHhhcCCCC
Confidence            7777777776543

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.01  E-value=7.3e-11  Score=82.18  Aligned_cols=63  Identities=19%  Similarity=0.242  Sum_probs=57.9

Q ss_pred             eeccCCccccCCCCCCCcccccchhhhhcccCCCCccccCcccccccChhhhhhhhhhcCCCc
Q 038614          116 VVDEDEYVRGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIK  178 (263)
Q Consensus       116 ~~~~~~~~~~c~~c~~~~~~~~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~k  178 (263)
                      .++.++.++.|..|++.|.....|..|+++|.++++|+|.+|++.|.....|..|+++|+++.
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            345667889999999999999999999999999999999999999999999999999998764

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.00  E-value=2.1e-10  Score=72.60  Aligned_cols=43  Identities=21%  Similarity=0.274  Sum_probs=37.3

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSS
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCC
Confidence            5788999999999999999999999999999999866555443

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.00  E-value=1.7e-10  Score=81.63  Aligned_cols=57  Identities=30%  Similarity=0.618  Sum_probs=52.3

Q ss_pred             ccccCcccccccChhhhhhhhhhcCCCcccccCCCCcccccccccccCCcceecCccccccCCchhhhhHhhhhcCCCC
Q 038614          151 KYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLA  229 (263)
Q Consensus       151 p~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  229 (263)
                      ||+|.+|++.|.....|..|+++|.                      ++++|.|++|++.|.+...|..|+++|.++.+
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~----------------------~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   57 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHS----------------------DTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKP   57 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHH----------------------TCCCEECSSSCCEESSHHHHHHHHHHHHTCCC
T ss_pred             CccCCCCcccccCchhHHHHHHHcC----------------------CCCCeeCCcCChhhCCHHHHHHHHHHhcCCCC
Confidence            6899999999999999999999887                      45789999999999999999999999998754

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.00  E-value=1.7e-10  Score=83.18  Aligned_cols=60  Identities=25%  Similarity=0.523  Sum_probs=53.0

Q ss_pred             CCCccccC--cccccccChhhhhhhhhhcCCCcccccCCCCcccccccccccCCcceecCccccccCCchhhhhHhhhhc
Q 038614          148 RTNKYKCK--TCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHF  225 (263)
Q Consensus       148 ~~kp~kC~--~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~  225 (263)
                      ++++|.|.  .|++.|.....|..|+++|.                      ++++|.|++|++.|.+...|..|+++|.
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~----------------------~~~~~~C~~C~~~f~~~~~l~~H~~~h~   58 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHT----------------------GQKPFQCRICMRNFSRSDHLTTHIRTHT   58 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHH----------------------CCCCEECTTTCCEESCHHHHHHHHHHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhC----------------------CCCCccCCCCCcccCCHHHHHHHHHHcC
Confidence            46799998  59999999999999998887                      4578999999999999999999999999


Q ss_pred             CCCC
Q 038614          226 TYLA  229 (263)
Q Consensus       226 ~~~~  229 (263)
                      ++.+
T Consensus        59 ~~~~   62 (90)
T 1a1h_A           59 GEKP   62 (90)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8754

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=3.9e-11  Score=89.01  Aligned_cols=67  Identities=13%  Similarity=0.145  Sum_probs=60.8

Q ss_pred             eeeccCCccccCCCCCCCcc-cccchhhhhcccCC-CCccccCcccccccChhhhhhhhhhcCCCcccc
Q 038614          115 AVVDEDEYVRGKSDDGDNDE-EEDKEEDESSLVSR-TNKYKCKTCKKEFRSYQALGGHKASHKKIKIHH  181 (263)
Q Consensus       115 ~~~~~~~~~~~c~~c~~~~~-~~~~~~~h~~~h~~-~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~  181 (263)
                      ..++.+..+|.|..|++.|. ....|..|+++|++ +++|+|.+|++.|.....|..|+++|.+++++.
T Consensus        16 ~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~   84 (98)
T 2gqj_A           16 QRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSD   84 (98)
T ss_dssp             HHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSC
T ss_pred             HHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCC
Confidence            34455678899999999999 99999999999998 999999999999999999999999999998764

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.9e-10  Score=72.68  Aligned_cols=43  Identities=26%  Similarity=0.331  Sum_probs=37.6

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCC
Confidence            5788999999999999999999999999999999866555443

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.9e-10  Score=72.79  Aligned_cols=43  Identities=26%  Similarity=0.380  Sum_probs=37.5

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSS
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            5788999999999999999999999999999999866555443

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.5e-10  Score=72.23  Aligned_cols=42  Identities=26%  Similarity=0.397  Sum_probs=36.6

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCccccc
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHN  182 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~  182 (263)
                      .|+++|+++++|+|..|++.|.....|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCC
Confidence            578889999999999999999999999999999986554443

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.98  E-value=2.1e-10  Score=72.58  Aligned_cols=42  Identities=26%  Similarity=0.360  Sum_probs=36.8

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCccccc
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHN  182 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~  182 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP   43 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            578899999999999999999999999999999986554444

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=98.98  E-value=1.1e-10  Score=77.20  Aligned_cols=56  Identities=20%  Similarity=0.129  Sum_probs=50.3

Q ss_pred             CccccCCCCCCCcccccchhhhhcccCCCCccccCcccccccChhhhhhhhhhcCC
Q 038614          121 EYVRGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKK  176 (263)
Q Consensus       121 ~~~~~c~~c~~~~~~~~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~  176 (263)
                      +.++.|..|++.|.....|..|+++|+++++|+|.+|++.|.....|..|+++|.+
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            45789999999999999999999999999999999999999999999999998863

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.9e-10  Score=72.02  Aligned_cols=43  Identities=26%  Similarity=0.342  Sum_probs=36.9

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS   44 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSC
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            4778899999999999999999999999999999865544443

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.9e-10  Score=72.68  Aligned_cols=43  Identities=23%  Similarity=0.244  Sum_probs=37.6

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSS
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5788999999999999999999999999999999876555443

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.98  E-value=2.5e-10  Score=72.38  Aligned_cols=43  Identities=26%  Similarity=0.332  Sum_probs=37.4

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4788999999999999999999999999999999866555443

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=2e-10  Score=72.03  Aligned_cols=42  Identities=29%  Similarity=0.343  Sum_probs=36.6

Q ss_pred             hhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          142 ESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       142 h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      |+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS   42 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            567899999999999999999999999999999876555443

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2e-10  Score=72.68  Aligned_cols=43  Identities=28%  Similarity=0.395  Sum_probs=37.2

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCC
Confidence            5788899999999999999999999999999999865554443

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.4e-10  Score=72.34  Aligned_cols=43  Identities=21%  Similarity=0.319  Sum_probs=37.1

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            5788899999999999999999999999999999866544443

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.6e-10  Score=72.10  Aligned_cols=42  Identities=19%  Similarity=0.218  Sum_probs=36.8

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCccccc
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHN  182 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~  182 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP   43 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            578899999999999999999999999999999986654444

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.3e-10  Score=72.31  Aligned_cols=43  Identities=26%  Similarity=0.427  Sum_probs=37.3

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS   44 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCC
Confidence            5788899999999999999999999999999999866554443

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.6e-10  Score=72.05  Aligned_cols=43  Identities=23%  Similarity=0.329  Sum_probs=37.4

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|.++++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            5788999999999999999999999999999999866554443

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.7e-10  Score=72.00  Aligned_cols=43  Identities=26%  Similarity=0.386  Sum_probs=37.1

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|.++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            5788999999999999999999999999999999865544443

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.97  E-value=2.4e-10  Score=72.41  Aligned_cols=42  Identities=26%  Similarity=0.357  Sum_probs=37.0

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCccccc
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHN  182 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~  182 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            578899999999999999999999999999999986654444

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.7e-10  Score=72.11  Aligned_cols=43  Identities=23%  Similarity=0.345  Sum_probs=37.3

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS   44 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            5788899999999999999999999999999999866555443

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=3.1e-10  Score=71.91  Aligned_cols=43  Identities=26%  Similarity=0.281  Sum_probs=37.2

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS   44 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCC
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCC
Confidence            4778899999999999999999999999999999866555443

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=2.7e-10  Score=72.07  Aligned_cols=43  Identities=26%  Similarity=0.339  Sum_probs=37.1

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTT
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4778899999999999999999999999999999866555443

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.7e-10  Score=72.15  Aligned_cols=42  Identities=21%  Similarity=0.335  Sum_probs=36.7

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCccccc
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHN  182 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~  182 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP   43 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            478889999999999999999999999999999986554443

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=2.6e-10  Score=72.12  Aligned_cols=43  Identities=26%  Similarity=0.267  Sum_probs=37.4

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS   44 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCS
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5788999999999999999999999999999999866555443

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=2.5e-10  Score=72.32  Aligned_cols=43  Identities=23%  Similarity=0.298  Sum_probs=37.3

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5788999999999999999999999999999999866555443

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.9e-10  Score=72.95  Aligned_cols=43  Identities=26%  Similarity=0.305  Sum_probs=37.6

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS   44 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCS
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCC
Confidence            5788999999999999999999999999999999866555443

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=3.4e-10  Score=71.62  Aligned_cols=42  Identities=21%  Similarity=0.326  Sum_probs=36.6

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCccccc
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHN  182 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~  182 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP   43 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSS
T ss_pred             CCCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCC
Confidence            478889999999999999999999999999999986554444

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.5e-10  Score=72.24  Aligned_cols=43  Identities=26%  Similarity=0.368  Sum_probs=37.4

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSS
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCC
Confidence            5788999999999999999999999999999999866554443

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.9e-10  Score=71.96  Aligned_cols=43  Identities=26%  Similarity=0.384  Sum_probs=37.3

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            5788999999999999999999999999999999866554443

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.1e-10  Score=72.62  Aligned_cols=43  Identities=26%  Similarity=0.420  Sum_probs=37.4

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            5788999999999999999999999999999999866555443

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.5e-10  Score=72.22  Aligned_cols=43  Identities=26%  Similarity=0.404  Sum_probs=37.4

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSS
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCC
Confidence            5788899999999999999999999999999999866555443

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=3.2e-10  Score=71.67  Aligned_cols=43  Identities=26%  Similarity=0.284  Sum_probs=37.3

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            5788899999999999999999999999999999866554443

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.96  E-value=3.3e-10  Score=71.60  Aligned_cols=43  Identities=28%  Similarity=0.370  Sum_probs=37.1

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTT
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCC
Confidence            4788899999999999999999999999999999866554443

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.9e-10  Score=71.92  Aligned_cols=42  Identities=26%  Similarity=0.328  Sum_probs=37.0

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCccccc
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHN  182 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~  182 (263)
                      .|+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP   43 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            578899999999999999999999999999999986655444

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.95  E-value=3e-10  Score=71.91  Aligned_cols=42  Identities=26%  Similarity=0.406  Sum_probs=36.7

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCccccc
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHN  182 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~  182 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP   43 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSS
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCC
Confidence            578899999999999999999999999999999986554443

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.95  E-value=3.4e-10  Score=71.68  Aligned_cols=43  Identities=28%  Similarity=0.383  Sum_probs=37.2

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS   44 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4778899999999999999999999999999999866555443

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.2e-10  Score=72.48  Aligned_cols=43  Identities=23%  Similarity=0.302  Sum_probs=37.4

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            5788999999999999999999999999999999866554443

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.2e-10  Score=72.52  Aligned_cols=43  Identities=26%  Similarity=0.373  Sum_probs=37.3

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            5788899999999999999999999999999999866554443

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.9e-10  Score=71.86  Aligned_cols=43  Identities=23%  Similarity=0.234  Sum_probs=37.3

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5788899999999999999999999999999999866554443

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=3.1e-10  Score=71.84  Aligned_cols=42  Identities=29%  Similarity=0.407  Sum_probs=36.5

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCccccc
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHN  182 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~  182 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            578889999999999999999999999999999986554443

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.3e-10  Score=71.65  Aligned_cols=43  Identities=23%  Similarity=0.333  Sum_probs=37.6

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|..|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTT
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            5788999999999999999999999999999999876555443

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=3.3e-10  Score=71.66  Aligned_cols=43  Identities=26%  Similarity=0.338  Sum_probs=37.2

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPS   44 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTT
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4778899999999999999999999999999999866555443

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=3.7e-10  Score=71.47  Aligned_cols=43  Identities=26%  Similarity=0.335  Sum_probs=37.3

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS   44 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSC
T ss_pred             CCCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCC
Confidence            4778899999999999999999999999999999876555443

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.94  E-value=6.5e-10  Score=81.07  Aligned_cols=68  Identities=21%  Similarity=0.211  Sum_probs=55.5

Q ss_pred             CCccccCcccccccChhhhhhhhhh-cCCCcccccCCCCcccccccccccCCcceecCccccccCCchhhhhHhhhhcCC
Q 038614          149 TNKYKCKTCKKEFRSYQALGGHKAS-HKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       149 ~kp~kC~~C~k~F~s~~~L~~H~~~-H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      ...|.|..|++.|.....|..|+++ |.++++..+..              -++|.|++|++.|.+...|..|+++|+++
T Consensus        23 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~--------------c~~~~C~~C~k~f~~~~~L~~H~~~H~~~   88 (95)
T 2ej4_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHV--------------CYWEECPREGKSFKAKYKLVNHIRVHTGE   88 (95)
T ss_dssp             CSSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCC--------------CCCTTCSSTTCCCSSHHHHHHHHHHHHTC
T ss_pred             cCCCcccccccccCCHHHHHHHHHHhccCCCCCCccc--------------eeccCCCCCCcccCCHHHHHHHHHhcCCC
Confidence            3458899999999999999999998 88765432211              13489999999999999999999999987


Q ss_pred             CCC
Q 038614          228 LAT  230 (263)
Q Consensus       228 ~~~  230 (263)
                      .+.
T Consensus        89 k~~   91 (95)
T 2ej4_A           89 KSG   91 (95)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            543

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.7e-10  Score=71.47  Aligned_cols=42  Identities=24%  Similarity=0.337  Sum_probs=36.6

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCccccc
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHN  182 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~  182 (263)
                      .|+++|+++++|.|.+|++.|.....|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP   43 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCS
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            578889999999999999999999999999999986554443

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=4.4e-10  Score=69.49  Aligned_cols=42  Identities=21%  Similarity=0.306  Sum_probs=37.8

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCccccc
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHN  182 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~  182 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            367889999999999999999999999999999998877653

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.2e-10  Score=71.77  Aligned_cols=42  Identities=29%  Similarity=0.342  Sum_probs=36.8

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCccccc
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHN  182 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~  182 (263)
                      .|+++|+++++|+|..|++.|.....|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCC
Confidence            578899999999999999999999999999999986554443

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=4.7e-10  Score=71.12  Aligned_cols=43  Identities=23%  Similarity=0.268  Sum_probs=37.3

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhh-hcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKA-SHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~-~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|++ +|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~   45 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS   45 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCC
Confidence            57889999999999999999999999999999 89866555443

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3e-10  Score=71.88  Aligned_cols=43  Identities=26%  Similarity=0.389  Sum_probs=37.5

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCC
Confidence            5788899999999999999999999999999999866555443

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3.7e-10  Score=71.62  Aligned_cols=43  Identities=21%  Similarity=0.325  Sum_probs=37.0

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS   44 (46)
T ss_dssp             CSCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCC
T ss_pred             CCCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            4778899999999999999999999999999999866554443

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3.5e-10  Score=71.56  Aligned_cols=42  Identities=24%  Similarity=0.353  Sum_probs=36.6

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCccccc
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHN  182 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~  182 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP   43 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCC
Confidence            478889999999999999999999999999999986554444

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=98.93  E-value=3.8e-10  Score=80.16  Aligned_cols=54  Identities=37%  Similarity=0.719  Sum_probs=50.2

Q ss_pred             cccc--CcccccccChhhhhhhhhhcCCCcccccCCCCcccccccccccCCcceecCc--cccccCCchhhhhHhhhhcC
Q 038614          151 KYKC--KTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPF--CDKVFDSGQALGGHKKIHFT  226 (263)
Q Consensus       151 p~kC--~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~~--Cgk~F~~~~~L~~H~r~H~~  226 (263)
                      ||+|  ..|++.|.....|..|+++|.                      ++++|.|++  |++.|.+...|..|+++|++
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~----------------------~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   58 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHT----------------------QQLPYECPHEGCDKRFSLPSRLKRHEKVHAG   58 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHH----------------------TTCCEECCSTTCCCEESSHHHHHHHHHHHHS
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhC----------------------CCCCeeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence            6899  899999999999999999887                      457899988  99999999999999999987

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=4.8e-10  Score=69.34  Aligned_cols=41  Identities=27%  Similarity=0.352  Sum_probs=37.2

Q ss_pred             hhcccCCCCccccCcccccccChhhhhhhhhhcCCCccccc
Q 038614          142 ESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHN  182 (263)
Q Consensus       142 h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~  182 (263)
                      |+++|+++++|+|.+|++.|.....|..|+++|+++++|.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            56789999999999999999999999999999998877765

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.92  E-value=5e-10  Score=81.67  Aligned_cols=61  Identities=15%  Similarity=0.073  Sum_probs=55.0

Q ss_pred             ccccCCCCCCCcccccchhhhhcc-cCCCCc--------cccCcccccccChhhhhhhhhhcCCCccccc
Q 038614          122 YVRGKSDDGDNDEEEDKEEDESSL-VSRTNK--------YKCKTCKKEFRSYQALGGHKASHKKIKIHHN  182 (263)
Q Consensus       122 ~~~~c~~c~~~~~~~~~~~~h~~~-h~~~kp--------~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~  182 (263)
                      ..+.|..|++.|.....|..|+++ |.++++        |.|.+|++.|.....|..|+++|+++++|.|
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   93 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPS   93 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSS
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCC
Confidence            345799999999999999999997 999888        9999999999999999999999998777665

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.92  E-value=4.6e-10  Score=69.52  Aligned_cols=41  Identities=29%  Similarity=0.388  Sum_probs=37.0

Q ss_pred             hhcccCCCCccccCcccccccChhhhhhhhhhcCCCccccc
Q 038614          142 ESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHN  182 (263)
Q Consensus       142 h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~  182 (263)
                      |+++|+++++|+|.+|++.|.+...|..|+++|+++++|.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            56789999999999999999999999999999998777654

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.92  E-value=3.7e-10  Score=83.83  Aligned_cols=58  Identities=16%  Similarity=0.253  Sum_probs=53.2

Q ss_pred             CCccccCCCCCCCc-ccccchhhhhcccCCCCccccCcccccccChhhhhhh-hhhcCCCc
Q 038614          120 DEYVRGKSDDGDND-EEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGH-KASHKKIK  178 (263)
Q Consensus       120 ~~~~~~c~~c~~~~-~~~~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H-~~~H~~~k  178 (263)
                      +..++.|..|++.| .....|..|+++| ++++|.|.+|+|.|.....|..| +++|+++.
T Consensus        31 ~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p   90 (96)
T 2ctd_A           31 DKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLP   90 (96)
T ss_dssp             HTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCS
T ss_pred             CCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCC
Confidence            34678999999999 8999999999999 99999999999999999999999 99998643

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=98.91  E-value=5.5e-10  Score=74.56  Aligned_cols=55  Identities=13%  Similarity=0.106  Sum_probs=51.6

Q ss_pred             cccCCCCCCCcccccchhhhhcccCCCCccccCcccccccChhhhhhhh-hhcCCC
Q 038614          123 VRGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHK-ASHKKI  177 (263)
Q Consensus       123 ~~~c~~c~~~~~~~~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~-~~H~~~  177 (263)
                      ++.|..|++.|.....|..|+++|+++++|+|..|++.|.....|..|+ ++|.++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            5789999999999999999999999999999999999999999999995 788865

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=6.3e-10  Score=70.34  Aligned_cols=43  Identities=23%  Similarity=0.371  Sum_probs=38.5

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            5788999999999999999999999999999999977766553

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=6.5e-10  Score=70.28  Aligned_cols=43  Identities=26%  Similarity=0.360  Sum_probs=38.6

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|..|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            5788899999999999999999999999999999987766653

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=4.3e-10  Score=71.22  Aligned_cols=43  Identities=26%  Similarity=0.370  Sum_probs=37.0

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em8_A            2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS   44 (46)
T ss_dssp             CCCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSC
T ss_pred             CCCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCC
Confidence            4678899999999999999999999999999999866554443

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=6.8e-10  Score=70.10  Aligned_cols=43  Identities=21%  Similarity=0.298  Sum_probs=38.6

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|..|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5788999999999999999999999999999999987766653

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=7.2e-10  Score=70.08  Aligned_cols=43  Identities=26%  Similarity=0.390  Sum_probs=38.6

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|..|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            5788899999999999999999999999999999987776654

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=5e-10  Score=70.90  Aligned_cols=43  Identities=26%  Similarity=0.381  Sum_probs=38.7

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            4788999999999999999999999999999999987776654

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=7.4e-10  Score=70.03  Aligned_cols=43  Identities=21%  Similarity=0.254  Sum_probs=38.5

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5788899999999999999999999999999999987766653

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=6.8e-10  Score=69.36  Aligned_cols=42  Identities=26%  Similarity=0.313  Sum_probs=38.2

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCccccc
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHN  182 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~  182 (263)
                      .|+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            578889999999999999999999999999999998777654

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=5.5e-10  Score=70.72  Aligned_cols=43  Identities=23%  Similarity=0.312  Sum_probs=38.4

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5788999999999999999999999999999999977766553

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.90  E-value=4.7e-10  Score=73.76  Aligned_cols=50  Identities=16%  Similarity=0.153  Sum_probs=45.3

Q ss_pred             CCcccccchhhhhcccCCCCccccCcccccccChhhhhhhhhhcCCCccc
Q 038614          131 DNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIH  180 (263)
Q Consensus       131 ~~~~~~~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~  180 (263)
                      +.|.....+..|+++|+++++|.|.+|++.|.....|..|+++|++++||
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            45666677888999999999999999999999999999999999999886

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=7.6e-10  Score=70.05  Aligned_cols=43  Identities=28%  Similarity=0.363  Sum_probs=38.5

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            5788899999999999999999999999999999987766653

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=6.2e-10  Score=70.48  Aligned_cols=43  Identities=30%  Similarity=0.394  Sum_probs=37.7

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSS
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4788899999999999999999999999999999976655543

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=8.5e-10  Score=69.82  Aligned_cols=43  Identities=23%  Similarity=0.366  Sum_probs=38.5

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|.|..|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            5788899999999999999999999999999999987766653

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=7.5e-10  Score=70.06  Aligned_cols=43  Identities=28%  Similarity=0.425  Sum_probs=38.6

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4788899999999999999999999999999999987776653

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.89  E-value=6.8e-10  Score=69.93  Aligned_cols=38  Identities=24%  Similarity=0.319  Sum_probs=32.7

Q ss_pred             cccCCCCccccCcccccccChhhhhhhhhhcCCCcccc
Q 038614          144 SLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHH  181 (263)
Q Consensus       144 ~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~  181 (263)
                      .+|+++++|+|.+|++.|.....|..|+++|+++++|.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~   40 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKS   40 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCC
Confidence            35889999999999999999999999999998654333

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=6.8e-10  Score=70.19  Aligned_cols=43  Identities=23%  Similarity=0.359  Sum_probs=38.5

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            5788999999999999999999999999999999977766553

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=7.4e-10  Score=70.02  Aligned_cols=43  Identities=28%  Similarity=0.421  Sum_probs=38.5

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|..|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5788999999999999999999999999999999987766653

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=8e-10  Score=68.47  Aligned_cols=41  Identities=24%  Similarity=0.396  Sum_probs=37.3

Q ss_pred             hhcccCCCCccccCcccccccChhhhhhhhhhcCCCccccc
Q 038614          142 ESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHN  182 (263)
Q Consensus       142 h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~  182 (263)
                      |+++|+++++|+|.+|++.|.....|..|+++|+++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            66789999999999999999999999999999998877754

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=7.3e-10  Score=69.95  Aligned_cols=43  Identities=23%  Similarity=0.333  Sum_probs=38.4

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|..|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            5788899999999999999999999999999999977766553

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=6.2e-10  Score=70.29  Aligned_cols=43  Identities=30%  Similarity=0.465  Sum_probs=38.7

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            5788899999999999999999999999999999987776654

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=9.4e-10  Score=69.69  Aligned_cols=43  Identities=26%  Similarity=0.397  Sum_probs=38.2

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CCSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            4678899999999999999999999999999999977766653

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.88  E-value=6.1e-10  Score=70.50  Aligned_cols=43  Identities=21%  Similarity=0.327  Sum_probs=38.6

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5788999999999999999999999999999999987766653

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=6.4e-10  Score=69.54  Aligned_cols=42  Identities=24%  Similarity=0.351  Sum_probs=38.2

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCccccc
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHN  182 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~  182 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|.++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            578899999999999999999999999999999998776654

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=6.8e-10  Score=69.50  Aligned_cols=42  Identities=21%  Similarity=0.373  Sum_probs=38.3

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCccccc
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHN  182 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~  182 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            578889999999999999999999999999999998877765

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.88  E-value=8.3e-10  Score=70.66  Aligned_cols=32  Identities=31%  Similarity=0.463  Sum_probs=29.1

Q ss_pred             cCCCCccccCcccccccChhhhhhhhhhcCCC
Q 038614          146 VSRTNKYKCKTCKKEFRSYQALGGHKASHKKI  177 (263)
Q Consensus       146 h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~  177 (263)
                      |..+++|+|.+|++.|.....|..|+++|+++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   38 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGE   38 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCC
Confidence            67889999999999999999999999988854

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=7.7e-10  Score=69.84  Aligned_cols=43  Identities=21%  Similarity=0.346  Sum_probs=38.5

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|..|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5788899999999999999999999999999999987766653

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=8.7e-10  Score=69.77  Aligned_cols=43  Identities=26%  Similarity=0.366  Sum_probs=38.6

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4778899999999999999999999999999999987776654

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=6.7e-10  Score=70.23  Aligned_cols=43  Identities=26%  Similarity=0.418  Sum_probs=38.5

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5788899999999999999999999999999999987766553

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=7.2e-10  Score=69.22  Aligned_cols=42  Identities=21%  Similarity=0.363  Sum_probs=38.3

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCccccc
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHN  182 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~  182 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            578889999999999999999999999999999998777654

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=6.8e-10  Score=70.28  Aligned_cols=43  Identities=26%  Similarity=0.375  Sum_probs=38.9

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            5788999999999999999999999999999999987777653

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1.1e-09  Score=69.27  Aligned_cols=43  Identities=23%  Similarity=0.395  Sum_probs=38.0

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4677899999999999999999999999999999987776653

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=8.9e-10  Score=68.97  Aligned_cols=42  Identities=19%  Similarity=0.347  Sum_probs=38.3

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCccccc
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHN  182 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~  182 (263)
                      .|+++|+++++|+|..|++.|.....|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            578889999999999999999999999999999998877765

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=5.5e-10  Score=69.14  Aligned_cols=41  Identities=24%  Similarity=0.353  Sum_probs=37.3

Q ss_pred             hhcccCCCCccccCcccccccChhhhhhhhhhcCCCccccc
Q 038614          142 ESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHN  182 (263)
Q Consensus       142 h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~  182 (263)
                      |+++|+++++|+|..|++.|.....|..|+++|+++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            67789999999999999999999999999999998877753

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=7.6e-10  Score=78.40  Aligned_cols=69  Identities=14%  Similarity=0.142  Sum_probs=58.7

Q ss_pred             cchhhhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccCCCCcccccccccccCCcceecCccccccCCchh
Q 038614          137 DKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVFDSGQA  216 (263)
Q Consensus       137 ~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~~Cgk~F~~~~~  216 (263)
                      .+|..|++++.++++|.|..|++.|. ...|..|+ .|.                      +++||.|+.|++.|. ...
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c----------------------~~~~~~C~~C~~~~~-~~~   57 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYC----------------------GARTELCGNCGRNVL-VKD   57 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHH----------------------HHCEEECSSSCCEEE-TTG
T ss_pred             hHHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHc----------------------CCCceEcccCCCcCc-HHH
Confidence            35668988999999999999999994 88888887 666                      568999999999987 599


Q ss_pred             hhhHhhhhcCCCCC
Q 038614          217 LGGHKKIHFTYLAT  230 (263)
Q Consensus       217 L~~H~r~H~~~~~~  230 (263)
                      |..|+++|.++...
T Consensus        58 l~~H~~~c~~~~~~   71 (75)
T 2d9k_A           58 LKTHPEVCGREGSG   71 (75)
T ss_dssp             GGTHHHHBTTBSSS
T ss_pred             HHHHHHHccCCcCC
Confidence            99999999986433

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=8.4e-10  Score=69.68  Aligned_cols=43  Identities=23%  Similarity=0.348  Sum_probs=38.4

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|..|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            5788999999999999999999999999999999977766553

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=6.9e-10  Score=70.24  Aligned_cols=43  Identities=21%  Similarity=0.340  Sum_probs=38.8

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5788999999999999999999999999999999987776653

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.86  E-value=8.4e-10  Score=68.21  Aligned_cols=41  Identities=22%  Similarity=0.320  Sum_probs=37.2

Q ss_pred             hhcccCCCCccccCcccccccChhhhhhhhhhcCCCccccc
Q 038614          142 ESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHN  182 (263)
Q Consensus       142 h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~  182 (263)
                      |+++|+++++|+|.+|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            56789999999999999999999999999999998877753

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=98.86  E-value=5.2e-10  Score=76.17  Aligned_cols=60  Identities=17%  Similarity=0.092  Sum_probs=54.2

Q ss_pred             eccCCccccCCCCCCCcccccchhhhhcc-c-CCCCccccCcccccccChhhhhhhhhhcCC
Q 038614          117 VDEDEYVRGKSDDGDNDEEEDKEEDESSL-V-SRTNKYKCKTCKKEFRSYQALGGHKASHKK  176 (263)
Q Consensus       117 ~~~~~~~~~c~~c~~~~~~~~~~~~h~~~-h-~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~  176 (263)
                      ++.++.++.|..|++.|.....|..|++. | +++++|+|..|++.|.....|..|+++|.+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            34556789999999999999999999987 7 689999999999999999999999998865

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=6.7e-10  Score=69.55  Aligned_cols=42  Identities=21%  Similarity=0.378  Sum_probs=38.5

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCccccc
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHN  182 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~  182 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            578889999999999999999999999999999998877765

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.1e-09  Score=68.76  Aligned_cols=42  Identities=24%  Similarity=0.313  Sum_probs=38.6

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCccccc
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHN  182 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~  182 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            578899999999999999999999999999999998887754

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=9.9e-10  Score=69.34  Aligned_cols=43  Identities=26%  Similarity=0.389  Sum_probs=38.5

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|..|++.|.....|..|+++|.++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5788999999999999999999999999999999987766653

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.85  E-value=1.7e-09  Score=64.86  Aligned_cols=36  Identities=28%  Similarity=0.534  Sum_probs=33.6

Q ss_pred             ccccccCCcceecCccccccCCchhhhhHhhhhcCC
Q 038614          192 GDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       192 h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      |.++|++++||+|++|++.|.+...|..|+++|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            678888999999999999999999999999999874

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=5.2e-10  Score=78.84  Aligned_cols=63  Identities=13%  Similarity=0.168  Sum_probs=56.3

Q ss_pred             cCCccccCCCCCCCcccccchhhhhcccCC---CCccccCcccccccChhhhhhhh-hhcCCCcccc
Q 038614          119 EDEYVRGKSDDGDNDEEEDKEEDESSLVSR---TNKYKCKTCKKEFRSYQALGGHK-ASHKKIKIHH  181 (263)
Q Consensus       119 ~~~~~~~c~~c~~~~~~~~~~~~h~~~h~~---~kp~kC~~C~k~F~s~~~L~~H~-~~H~~~kp~~  181 (263)
                      .++.+|.|..|++.|.....|..|+++|.+   +++|+|.+|++.|.....|..|+ +.|.++++..
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~   69 (78)
T 2d9h_A            3 SGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAP   69 (78)
T ss_dssp             CSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCC
T ss_pred             CCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCc
Confidence            456789999999999999999999999986   89999999999999999999998 6788776553

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=8.5e-10  Score=69.66  Aligned_cols=43  Identities=23%  Similarity=0.335  Sum_probs=38.4

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            4788899999999999999999999999999999977766653

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.3e-09  Score=68.83  Aligned_cols=42  Identities=29%  Similarity=0.391  Sum_probs=35.8

Q ss_pred             hhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          142 ESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       142 h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      ++++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         3 ~~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCC
T ss_pred             CCCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCC
Confidence            456789999999999999999999999999999866555443

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.83  E-value=1.4e-09  Score=71.45  Aligned_cols=38  Identities=16%  Similarity=0.294  Sum_probs=32.2

Q ss_pred             ccccccCCcceecCccccccCCchhhhhHhhhhcCCCC
Q 038614          192 GDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLA  229 (263)
Q Consensus       192 h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  229 (263)
                      |+++|+++++|.|.+|++.|.+...|..|+++|+++.+
T Consensus        15 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp   52 (54)
T 1yui_A           15 PRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKP   52 (54)
T ss_dssp             CHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSC
T ss_pred             HHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCC
Confidence            44444467899999999999999999999999998743

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=1.6e-09  Score=67.86  Aligned_cols=42  Identities=24%  Similarity=0.274  Sum_probs=37.8

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCccccc
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHN  182 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~  182 (263)
                      .|+++|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         2 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            2 SSGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CCSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            367789999999999999999999999999999998777654

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=9.5e-10  Score=69.57  Aligned_cols=43  Identities=28%  Similarity=0.413  Sum_probs=38.4

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5788899999999999999999999999999999977766553

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=1.4e-09  Score=68.75  Aligned_cols=42  Identities=24%  Similarity=0.460  Sum_probs=37.7

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCC-Cccccc
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKK-IKIHHN  182 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~-~kp~~~  182 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|++ +++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C   44 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSS
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCC
Confidence            478889999999999999999999999999999997 766654

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=8e-10  Score=69.86  Aligned_cols=43  Identities=21%  Similarity=0.298  Sum_probs=38.7

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .|+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5788899999999999999999999999999999987777653

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=9.3e-10  Score=75.93  Aligned_cols=63  Identities=13%  Similarity=0.080  Sum_probs=51.5

Q ss_pred             cceeeccCCccccCCCCCCCcccccchhhhhcccCCCCccccCcccccccChhhhhhhhhhcCCCccccc
Q 038614          113 AEAVVDEDEYVRGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHN  182 (263)
Q Consensus       113 ~~~~~~~~~~~~~c~~c~~~~~~~~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~  182 (263)
                      .+..++.+..++.|..|++.|.....|..       +++|.|..|++.|.....|..|+++|.++++|.|
T Consensus         8 ~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C   70 (73)
T 2ctu_A            8 KRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGP   70 (73)
T ss_dssp             CCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSC
T ss_pred             HHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCC
Confidence            34455667788999999999998877655       7899999999999999999999888886554443

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.5e-09  Score=68.68  Aligned_cols=41  Identities=24%  Similarity=0.357  Sum_probs=35.0

Q ss_pred             hcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          143 SSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       143 ~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      +++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS   44 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            46789999999999999999999999999999865544443

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=98.79  E-value=3.9e-09  Score=75.67  Aligned_cols=59  Identities=22%  Similarity=0.418  Sum_probs=52.8

Q ss_pred             CCccccCc--ccccccChhhhhhhhhhcCCCcccccCCCCcccccccccccCCcceecC--ccccccCCchhhhhHhhhh
Q 038614          149 TNKYKCKT--CKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCP--FCDKVFDSGQALGGHKKIH  224 (263)
Q Consensus       149 ~kp~kC~~--C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~--~Cgk~F~~~~~L~~H~r~H  224 (263)
                      .++|.|..  |++.|.....|..|+++|.                      ++++|.|+  .|++.|.+...|..|+++|
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~----------------------~~~~~~C~~~~C~~~f~~~~~l~~H~~~h   60 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHT----------------------GEKPYHCDWDGCGWKFARSDELTRHYRKH   60 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSC----------------------SSCCEECCSTTTCCEESSHHHHHHHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcC----------------------CCCCcCCCCCCCCCccCCHHHHHHHHHHc
Confidence            56799999  9999999999999998877                      45789997  5999999999999999999


Q ss_pred             cCCCC
Q 038614          225 FTYLA  229 (263)
Q Consensus       225 ~~~~~  229 (263)
                      .++.+
T Consensus        61 ~~~~~   65 (89)
T 2wbs_A           61 TGHRP   65 (89)
T ss_dssp             HCCCC
T ss_pred             CCCCC
Confidence            98754

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.78  E-value=4e-09  Score=65.14  Aligned_cols=38  Identities=21%  Similarity=0.426  Sum_probs=34.9

Q ss_pred             ccccccCCcceecCccccccCCchhhhhHhhhhcCCCC
Q 038614          192 GDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLA  229 (263)
Q Consensus       192 h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  229 (263)
                      |+++|+++++|.|++|++.|.+...|..|+++|+++.+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   38 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESG   38 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCS
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCC
Confidence            56788899999999999999999999999999998754

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=3.8e-09  Score=65.15  Aligned_cols=39  Identities=21%  Similarity=0.389  Sum_probs=35.5

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLA  229 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  229 (263)
                      +|+++|++++||.|++|++.|.+...|..|+++|+++.+
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   39 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGP   39 (42)
T ss_dssp             CCCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSC
T ss_pred             CCccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCC
Confidence            377889999999999999999999999999999998754

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=5.5e-09  Score=65.38  Aligned_cols=39  Identities=18%  Similarity=0.259  Sum_probs=35.7

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLA  229 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  229 (263)
                      .|+++|++++||.|.+|++.|.+...|..|+++|+++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSG   40 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCC
Confidence            477888999999999999999999999999999998754

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.77  E-value=1.3e-09  Score=75.62  Aligned_cols=59  Identities=14%  Similarity=0.222  Sum_probs=53.9

Q ss_pred             eccCCccccCC--CCCCCcccccchhhhhcccCCCCccccCcccccccChhhhhhhhhhcC
Q 038614          117 VDEDEYVRGKS--DDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHK  175 (263)
Q Consensus       117 ~~~~~~~~~c~--~c~~~~~~~~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~  175 (263)
                      ...+..++.|.  .|++.|.....|..|+++|.++++|+|.+|++.|.....|..|+++|+
T Consensus        13 ~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             cCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            34566788996  799999999999999999999999999999999999999999999885

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=4.7e-09  Score=64.71  Aligned_cols=38  Identities=21%  Similarity=0.466  Sum_probs=34.7

Q ss_pred             ccccccCCcceecCccccccCCchhhhhHhhhhcCCCC
Q 038614          192 GDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLA  229 (263)
Q Consensus       192 h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  229 (263)
                      |+++|++++||.|++|++.|.+...|..|+++|+++.+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   38 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSG   38 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSS
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCC
Confidence            56788899999999999999999999999999998654

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=6.9e-09  Score=64.78  Aligned_cols=39  Identities=26%  Similarity=0.445  Sum_probs=35.7

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLA  229 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  229 (263)
                      +|+++|++++||.|++|++.|.....|..|+++|+++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG   40 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCS
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCC
Confidence            477888999999999999999999999999999998754

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=3.6e-09  Score=66.89  Aligned_cols=42  Identities=19%  Similarity=0.188  Sum_probs=37.0

Q ss_pred             hhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          142 ESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       142 h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .+++|+++++|+|.+|++.|.....|..|+++|+++++|.|.
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            356789999999999999999999999999999987777653

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=3.6e-09  Score=65.06  Aligned_cols=39  Identities=28%  Similarity=0.386  Sum_probs=35.2

Q ss_pred             cccCCCCccccCcccccccChhhhhhhhhhcCCCccccc
Q 038614          144 SLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHN  182 (263)
Q Consensus       144 ~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~  182 (263)
                      ++|+++++|+|.+|++.|.....|..|+++|++++||.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            468899999999999999999999999999998877753

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=2.9e-09  Score=66.93  Aligned_cols=41  Identities=24%  Similarity=0.373  Sum_probs=36.3

Q ss_pred             hhcccCCCCccccCcccccccChhhhhhhhhhcCCCccccc
Q 038614          142 ESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHN  182 (263)
Q Consensus       142 h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~  182 (263)
                      +.++|+++++|+|.+|++.|.....|..|+++|+++++|.|
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (45)
T 2epu_A            3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS   43 (45)
T ss_dssp             CCCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCS
T ss_pred             CCCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCC
Confidence            45678999999999999999999999999999997776655

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=98.75  E-value=1e-08  Score=75.05  Aligned_cols=63  Identities=22%  Similarity=0.398  Sum_probs=54.9

Q ss_pred             CCCCccccCc--ccccccChhhhhhhhhhcCCCcccccCCCCcccccccccccCCcceecC--ccccccCCchhhhhHhh
Q 038614          147 SRTNKYKCKT--CKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCP--FCDKVFDSGQALGGHKK  222 (263)
Q Consensus       147 ~~~kp~kC~~--C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~--~Cgk~F~~~~~L~~H~r  222 (263)
                      ..+++|.|..  |++.|.....|..|+++|.                      ++++|.|+  .|++.|.+...|..|++
T Consensus        11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~----------------------~~~~~~C~~~~C~~~f~~~~~l~~H~~   68 (100)
T 2ebt_A           11 EKRRIHYCDYPGCTKVYTKSSHLKAHLRTHT----------------------GEKPYKCTWEGCDWRFARSDELTRHYR   68 (100)
T ss_dssp             CSCCCEECCSSSCCCEESCHHHHHHHHHHHS----------------------CCCCEECCSSSCCCEESSHHHHHHHHH
T ss_pred             ccCcceEcCCCCCCCcccCHHHHHHHHHHhC----------------------CCCCeeCCCCCCCCccCCHHHHHHHHH
Confidence            3567899997  9999999999999999887                      45789996  69999999999999999


Q ss_pred             hhcCCCCCC
Q 038614          223 IHFTYLATP  231 (263)
Q Consensus       223 ~H~~~~~~~  231 (263)
                      +|.++.+..
T Consensus        69 ~h~~~~~~~   77 (100)
T 2ebt_A           69 KHTGAKPFQ   77 (100)
T ss_dssp             HHTSCCSCB
T ss_pred             HhCCCCCeE
Confidence            999876543

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=1.9e-09  Score=73.74  Aligned_cols=59  Identities=10%  Similarity=0.033  Sum_probs=53.4

Q ss_pred             cCCccccCCCCCCCcccccchhhhhcccCCCCccccC-cccccccChhhhhhhhhhcCCCcc
Q 038614          119 EDEYVRGKSDDGDNDEEEDKEEDESSLVSRTNKYKCK-TCKKEFRSYQALGGHKASHKKIKI  179 (263)
Q Consensus       119 ~~~~~~~c~~c~~~~~~~~~~~~h~~~h~~~kp~kC~-~C~k~F~s~~~L~~H~~~H~~~kp  179 (263)
                      ....++.|..|++.|. ...|..|+++ ++++||+|. .|++.|.....|..|+++|...++
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            3456789999999999 9999999998 999999999 999999999999999999986654

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.75  E-value=5.6e-09  Score=65.91  Aligned_cols=40  Identities=23%  Similarity=0.444  Sum_probs=36.4

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      .|+++|++++||.|++|++.|.+...|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPS   41 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSS
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            4788899999999999999999999999999999987553

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=6e-09  Score=64.90  Aligned_cols=39  Identities=18%  Similarity=0.371  Sum_probs=35.7

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLA  229 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  229 (263)
                      .|+++|+++++|.|++|++.|.+...|..|+++|+++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESG   40 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCC
Confidence            477889999999999999999999999999999998754

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=6.4e-09  Score=65.57  Aligned_cols=40  Identities=23%  Similarity=0.485  Sum_probs=36.3

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      +|+++|++++||.|++|++.|.+...|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPS   41 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCS
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCC
Confidence            4788899999999999999999999999999999987543

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=4.5e-09  Score=64.89  Aligned_cols=38  Identities=21%  Similarity=0.276  Sum_probs=34.9

Q ss_pred             ccccccCCcceecCccccccCCchhhhhHhhhhcCCCC
Q 038614          192 GDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLA  229 (263)
Q Consensus       192 h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  229 (263)
                      |+++|++++||.|++|++.|.+...|..|+++|+++.+
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   39 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGP   39 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCS
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCC
Confidence            67788899999999999999999999999999998754

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=6.3e-09  Score=65.53  Aligned_cols=40  Identities=20%  Similarity=0.363  Sum_probs=36.4

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      +|+++|++++||.|++|++.|.+...|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPS   41 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCS
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCC
Confidence            4778899999999999999999999999999999987553

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.74  E-value=6.4e-09  Score=65.56  Aligned_cols=40  Identities=23%  Similarity=0.470  Sum_probs=36.2

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      +|+++|++++||.|++|++.|.....|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   41 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPS   41 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCS
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCc
Confidence            4788899999999999999999999999999999987543

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=6.1e-09  Score=65.74  Aligned_cols=40  Identities=23%  Similarity=0.376  Sum_probs=36.2

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      .|+++|++++||.|.+|++.|.....|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPS   41 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            3778889999999999999999999999999999987654

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=5.9e-09  Score=65.74  Aligned_cols=40  Identities=25%  Similarity=0.426  Sum_probs=36.3

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      .|+++|+++++|.|++|++.|.....|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPS   41 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCC
Confidence            4778899999999999999999999999999999987654

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.74  E-value=6.6e-09  Score=65.43  Aligned_cols=40  Identities=18%  Similarity=0.289  Sum_probs=36.3

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      +|+++|++++||.|++|++.|.+...|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPS   41 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCS
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            4788899999999999999999999999999999987543

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=6.2e-09  Score=65.64  Aligned_cols=40  Identities=18%  Similarity=0.403  Sum_probs=36.3

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      +|+++|+++++|.|++|++.|.+...|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPS   41 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCC
Confidence            4778899999999999999999999999999999987553

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=6.4e-09  Score=65.64  Aligned_cols=40  Identities=20%  Similarity=0.340  Sum_probs=36.4

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      +|+++|++++||.|.+|++.|.+...|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHS   41 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBT
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCC
Confidence            4788899999999999999999999999999999987654

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.73  E-value=5.4e-09  Score=65.18  Aligned_cols=39  Identities=21%  Similarity=0.264  Sum_probs=34.9

Q ss_pred             cccCCCCccccCcccccccChhhhhhhhhhcCCCccccc
Q 038614          144 SLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHN  182 (263)
Q Consensus       144 ~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~  182 (263)
                      ++|+++++|+|..|++.|.....|..|+++|+++++|.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPS   41 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSS
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccC
Confidence            468899999999999999999999999999998776655

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=5.7e-09  Score=65.90  Aligned_cols=40  Identities=18%  Similarity=0.378  Sum_probs=36.4

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      +|+++|++++||.|++|++.|.+...|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLS   41 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSS
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCC
Confidence            4788899999999999999999999999999999987654

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=7e-09  Score=65.30  Aligned_cols=40  Identities=20%  Similarity=0.364  Sum_probs=36.4

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      .|+++|+++++|.|++|++.|.+...|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~   41 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPS   41 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSS
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCc
Confidence            4778899999999999999999999999999999987654

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=7e-09  Score=65.37  Aligned_cols=40  Identities=23%  Similarity=0.399  Sum_probs=36.2

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      .|+++|+++++|.|++|++.|.+...|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPS   41 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCC
Confidence            3778889999999999999999999999999999987543

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=6.2e-09  Score=65.62  Aligned_cols=40  Identities=23%  Similarity=0.409  Sum_probs=36.2

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPS   41 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCC
Confidence            4778899999999999999999999999999999987543

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=6.7e-09  Score=64.82  Aligned_cols=39  Identities=26%  Similarity=0.442  Sum_probs=35.4

Q ss_pred             ccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          192 GDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       192 h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      |+++|++++||.|.+|++.|.+...|..|+++|+++.+.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   39 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPS   39 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            577889999999999999999999999999999987543

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=6.5e-09  Score=65.63  Aligned_cols=40  Identities=23%  Similarity=0.392  Sum_probs=36.2

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      .|+++|++++||.|.+|++.|.+...|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPS   41 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCC
Confidence            4778889999999999999999999999999999987554

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=5.9e-09  Score=64.41  Aligned_cols=38  Identities=21%  Similarity=0.359  Sum_probs=34.8

Q ss_pred             ccccccCCcceecCccccccCCchhhhhHhhhhcCCCC
Q 038614          192 GDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLA  229 (263)
Q Consensus       192 h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  229 (263)
                      |+++|++++||.|++|++.|.+...|..|+++|+++.+
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   39 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGP   39 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSS
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCC
Confidence            67788899999999999999999999999999998643

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=7.1e-09  Score=65.35  Aligned_cols=40  Identities=23%  Similarity=0.374  Sum_probs=36.3

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      +|+++|+++++|.|++|++.|.+...|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPS   41 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCS
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCC
Confidence            4788899999999999999999999999999999987543

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=7.1e-09  Score=65.37  Aligned_cols=40  Identities=20%  Similarity=0.424  Sum_probs=36.3

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      .|+++|++++||.|.+|++.|.+...|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   41 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPS   41 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            4778889999999999999999999999999999987553

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=7.5e-09  Score=65.32  Aligned_cols=40  Identities=20%  Similarity=0.421  Sum_probs=36.3

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      +|+++|++++||.|++|++.|.+...|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPS   41 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCS
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCC
Confidence            4778889999999999999999999999999999987554

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=5.8e-09  Score=64.96  Aligned_cols=39  Identities=21%  Similarity=0.254  Sum_probs=35.7

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLA  229 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  229 (263)
                      .|+++|+++++|.|++|++.|.+...|..|+++|+++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESG   40 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSS
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCC
Confidence            477889999999999999999999999999999998754

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=7.3e-09  Score=65.31  Aligned_cols=40  Identities=25%  Similarity=0.456  Sum_probs=36.2

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      .|+++|+++++|.|++|++.|.+...|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPS   41 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCC
Confidence            4778889999999999999999999999999999987543

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=6.9e-09  Score=65.34  Aligned_cols=40  Identities=20%  Similarity=0.390  Sum_probs=36.3

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      .|+++|++++||.|++|++.|.+...|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPS   41 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSS
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            4778889999999999999999999999999999987653

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.73  E-value=7.3e-09  Score=65.39  Aligned_cols=40  Identities=18%  Similarity=0.379  Sum_probs=36.3

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      +|+++|++++||.|++|++.|.+...|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPS   41 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCS
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCC
Confidence            4788899999999999999999999999999999987543

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=6.6e-09  Score=65.58  Aligned_cols=39  Identities=26%  Similarity=0.358  Sum_probs=35.9

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLA  229 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  229 (263)
                      .|+++|++++||.|++|++.|.+...|..|+++|+++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKS   40 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTS
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCC
Confidence            478889999999999999999999999999999998754

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=8.2e-09  Score=64.98  Aligned_cols=40  Identities=20%  Similarity=0.266  Sum_probs=36.2

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      .|+++|++++||.|++|++.|.+...|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHS   41 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCS
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            4778899999999999999999999999999999987543

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=6.7e-09  Score=65.46  Aligned_cols=40  Identities=23%  Similarity=0.471  Sum_probs=36.2

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      .|+++|++++||.|++|++.|.+...|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPS   41 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCS
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCC
Confidence            4778899999999999999999999999999999987543

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.72  E-value=7.4e-09  Score=63.82  Aligned_cols=38  Identities=16%  Similarity=0.226  Sum_probs=34.8

Q ss_pred             ccccccCCcceecCccccccCCchhhhhHhhhhcCCCC
Q 038614          192 GDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLA  229 (263)
Q Consensus       192 h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  229 (263)
                      |+++|++++||.|++|++.|.+...|..|+++|+++.+
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~   39 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGP   39 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCC
Confidence            66788899999999999999999999999999998754

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=8.7e-09  Score=65.02  Aligned_cols=39  Identities=21%  Similarity=0.360  Sum_probs=35.6

Q ss_pred             ccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          192 GDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       192 h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      |+++|++++||.|++|++.|.....|..|+++|+++.+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSS   41 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCC
Confidence            678888999999999999999999999999999987654

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=8e-09  Score=65.03  Aligned_cols=40  Identities=25%  Similarity=0.340  Sum_probs=36.2

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      .|+++|+++++|.|++|++.|.+...|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPS   41 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTT
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCC
Confidence            4778899999999999999999999999999999987543

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=7.3e-09  Score=65.29  Aligned_cols=40  Identities=18%  Similarity=0.322  Sum_probs=36.2

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      +|+++|++++||.|.+|++.|.+...|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPS   41 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCS
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCC
Confidence            4778899999999999999999999999999999987543

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=5.3e-09  Score=66.40  Aligned_cols=42  Identities=21%  Similarity=0.370  Sum_probs=35.7

Q ss_pred             hhcccCCCCccccC--cccccccChhhhhhhhhhcCCCcccccC
Q 038614          142 ESSLVSRTNKYKCK--TCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       142 h~~~h~~~kp~kC~--~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      |.++|+++++|+|.  .|++.|.....|..|+++|+++++|.|.
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   46 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS   46 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            56779999999998  8999999999999999999866555443

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=8.4e-09  Score=64.94  Aligned_cols=39  Identities=23%  Similarity=0.314  Sum_probs=35.8

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLA  229 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  229 (263)
                      +|+++|++++||.|++|++.|.+...|..|+++|+++.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERH   40 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSS
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCC
Confidence            478889999999999999999999999999999998754

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=7.3e-09  Score=65.22  Aligned_cols=39  Identities=18%  Similarity=0.403  Sum_probs=35.8

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLA  229 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  229 (263)
                      .|+++|++++||.|++|++.|.+...|..|+++|+++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKP   40 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCC
Confidence            478889999999999999999999999999999998754

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.72  E-value=9e-09  Score=64.95  Aligned_cols=39  Identities=28%  Similarity=0.422  Sum_probs=35.5

Q ss_pred             ccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          192 GDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       192 h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      |+++|++++||.|++|++.|.+...|..|+++|+++.+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPS   41 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCC
Confidence            678888999999999999999999999999999987543

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=6.6e-09  Score=65.50  Aligned_cols=40  Identities=25%  Similarity=0.458  Sum_probs=36.3

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      .|+++|+++++|.|++|++.|.+...|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPS   41 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCS
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCC
Confidence            4778889999999999999999999999999999987554

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=6.4e-09  Score=62.28  Aligned_cols=35  Identities=23%  Similarity=0.538  Sum_probs=32.3

Q ss_pred             ccccCCcceecCccccccCCchhhhhHhhhhcCCC
Q 038614          194 AVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYL  228 (263)
Q Consensus       194 ~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  228 (263)
                      ++|++++||.|.+|++.|.....|..|+++|+++.
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence            56889999999999999999999999999999863

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=8.1e-09  Score=65.01  Aligned_cols=40  Identities=20%  Similarity=0.350  Sum_probs=36.4

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPS   41 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            4788899999999999999999999999999999987554

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=6.9e-09  Score=65.40  Aligned_cols=40  Identities=25%  Similarity=0.423  Sum_probs=36.2

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      +|+++|++++||.|.+|++.|.+...|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPS   41 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCS
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            4778899999999999999999999999999999987543

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=8.7e-09  Score=64.31  Aligned_cols=39  Identities=18%  Similarity=0.356  Sum_probs=35.7

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLA  229 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  229 (263)
                      .|+++|++++||.|++|++.|.....|..|+++|+++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSG   40 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCC
Confidence            477888999999999999999999999999999998754

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.72  E-value=8e-09  Score=65.11  Aligned_cols=40  Identities=28%  Similarity=0.487  Sum_probs=36.2

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      +|+++|++++||.|++|++.|.+...|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPS   41 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCC
Confidence            4778889999999999999999999999999999987543

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.71  E-value=4.7e-09  Score=73.70  Aligned_cols=63  Identities=11%  Similarity=0.065  Sum_probs=55.1

Q ss_pred             ceeeccCCccccCCCCCCCcccccchhhhhc-ccCCC-CccccCcccccccChhhhhhhhhhcCC
Q 038614          114 EAVVDEDEYVRGKSDDGDNDEEEDKEEDESS-LVSRT-NKYKCKTCKKEFRSYQALGGHKASHKK  176 (263)
Q Consensus       114 ~~~~~~~~~~~~c~~c~~~~~~~~~~~~h~~-~h~~~-kp~kC~~C~k~F~s~~~L~~H~~~H~~  176 (263)
                      +..++.++.+|.|..|++.|.....|..|++ .|.++ ++|+|.+|++.|.....|..|++.|.+
T Consensus         6 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            6 SGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             cccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            4456677889999999999999999999986 68875 899999999999999999999987543

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=5.7e-09  Score=65.08  Aligned_cols=39  Identities=23%  Similarity=0.371  Sum_probs=35.5

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLA  229 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  229 (263)
                      .|+++|++++||.|++|++.|.+...|..|+++|+++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSG   40 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCS
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCC
Confidence            377889999999999999999999999999999998643

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=7.9e-09  Score=65.22  Aligned_cols=40  Identities=25%  Similarity=0.414  Sum_probs=35.9

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      .|+++|++++||.|++|++.|.+...|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPS   41 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCS
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            3778888999999999999999999999999999987543

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=7.6e-09  Score=65.21  Aligned_cols=40  Identities=20%  Similarity=0.310  Sum_probs=36.3

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      +|+++|++++||.|.+|++.|.....|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPS   41 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCC
Confidence            4788899999999999999999999999999999987543

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=8.3e-09  Score=64.97  Aligned_cols=40  Identities=20%  Similarity=0.414  Sum_probs=36.3

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      +|+++|+++++|.|.+|++.|.....|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPS   41 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSS
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCC
Confidence            4778899999999999999999999999999999987654

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=7.9e-09  Score=65.06  Aligned_cols=39  Identities=21%  Similarity=0.294  Sum_probs=35.8

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLA  229 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  229 (263)
                      +|+++|++++||.|.+|++.|.+...|..|+++|+++.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENP   40 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCC
Confidence            478889999999999999999999999999999998754

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=7.4e-09  Score=65.27  Aligned_cols=40  Identities=23%  Similarity=0.395  Sum_probs=36.3

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      .|+++|+++++|.|++|++.|.....|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPS   41 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCS
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCC
Confidence            4778899999999999999999999999999999987543

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.71  E-value=9.8e-09  Score=64.62  Aligned_cols=39  Identities=18%  Similarity=0.347  Sum_probs=35.7

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLA  229 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  229 (263)
                      .|+++|++++||.|++|++.|.+...|..|+++|+++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKP   40 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCC
Confidence            477888999999999999999999999999999998754

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=8.5e-09  Score=65.06  Aligned_cols=40  Identities=23%  Similarity=0.509  Sum_probs=36.3

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      .|+++|++++||.|.+|++.|.+...|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPS   41 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCC
Confidence            4778889999999999999999999999999999987653

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=9.4e-09  Score=64.79  Aligned_cols=40  Identities=20%  Similarity=0.424  Sum_probs=36.2

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      .|+++|++++||.|++|++.|.....|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPS   41 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            4778889999999999999999999999999999987543

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=8.8e-09  Score=64.91  Aligned_cols=40  Identities=23%  Similarity=0.426  Sum_probs=36.1

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      .|+++|++++||.|++|++.|.+...|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPS   41 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSS
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCC
Confidence            4778889999999999999999999999999999987543

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=8.5e-09  Score=64.99  Aligned_cols=39  Identities=26%  Similarity=0.460  Sum_probs=35.6

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLA  229 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  229 (263)
                      .|+++|++++||.|++|++.|.+...|..|+++|+++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKP   40 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCC
Confidence            477888999999999999999999999999999998754

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=8.1e-09  Score=65.01  Aligned_cols=40  Identities=25%  Similarity=0.504  Sum_probs=36.2

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      +|+++|+++++|.|++|++.|.+...|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   41 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPS   41 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCC
Confidence            4778889999999999999999999999999999987543

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.70  E-value=3.3e-09  Score=77.50  Aligned_cols=43  Identities=19%  Similarity=0.302  Sum_probs=37.0

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCCcccccC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNG  183 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~  183 (263)
                      .+.++|+++++|+|.+|++.|.....|..|+++|++++||.|.
T Consensus        15 ~~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~   57 (88)
T 1x6f_A           15 LGNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAK   57 (88)
T ss_dssp             CCCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCC
T ss_pred             ccccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccc
Confidence            4566799999999999999999999999999999976665543

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=9.4e-09  Score=64.77  Aligned_cols=40  Identities=25%  Similarity=0.429  Sum_probs=36.2

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      +|+++|+++++|.|++|++.|.+...|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPS   41 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCS
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCC
Confidence            4778899999999999999999999999999999987543

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=8.3e-09  Score=65.04  Aligned_cols=40  Identities=28%  Similarity=0.361  Sum_probs=36.2

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      .|+++|+++++|.|.+|++.|.+...|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPS   41 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCS
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCC
Confidence            4778889999999999999999999999999999987543

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=1e-08  Score=64.65  Aligned_cols=40  Identities=25%  Similarity=0.537  Sum_probs=36.2

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      .|+++|++++||.|.+|++.|.+...|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPS   41 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSS
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCC
Confidence            4778889999999999999999999999999999987543

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=1e-08  Score=64.70  Aligned_cols=39  Identities=18%  Similarity=0.376  Sum_probs=35.4

Q ss_pred             ccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          192 GDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       192 h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      |+++|++++||.|++|++.|.+...|..|+++|+++.+.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   41 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTS   41 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCC
Confidence            678888999999999999999999999999999987543

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=8.8e-09  Score=64.90  Aligned_cols=40  Identities=25%  Similarity=0.432  Sum_probs=36.0

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      .|+++|++++||.|++|++.|.+...|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPS   41 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCS
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCC
Confidence            4778888999999999999999999999999999987543

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=9.7e-09  Score=64.70  Aligned_cols=40  Identities=20%  Similarity=0.409  Sum_probs=36.1

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      .|+++|+++++|.|++|++.|.+...|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPS   41 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSS
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCC
Confidence            4778889999999999999999999999999999987543

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=8e-09  Score=65.03  Aligned_cols=39  Identities=23%  Similarity=0.445  Sum_probs=35.7

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLA  229 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  229 (263)
                      .|+++|++++||.|++|++.|.+...|..|+++|+++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKP   40 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCC
Confidence            477888999999999999999999999999999998754

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=1.1e-08  Score=64.40  Aligned_cols=39  Identities=21%  Similarity=0.433  Sum_probs=35.7

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLA  229 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  229 (263)
                      .|+++|++++||.|++|++.|.+...|..|+++|+++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKP   40 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCC
Confidence            477888999999999999999999999999999998754

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=1e-08  Score=64.60  Aligned_cols=39  Identities=21%  Similarity=0.315  Sum_probs=35.4

Q ss_pred             ccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          192 GDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       192 h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      |+++|+++++|.|++|++.|.+...|..|+++|+++.+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPS   41 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCS
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCC
Confidence            678888999999999999999999999999999987543

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.70  E-value=1e-08  Score=60.55  Aligned_cols=34  Identities=26%  Similarity=0.436  Sum_probs=31.3

Q ss_pred             cccCCcceecCccccccCCchhhhhHhhhhcCCC
Q 038614          195 VVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYL  228 (263)
Q Consensus       195 ~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  228 (263)
                      +|++++||.|.+|++.|.....|..|+++|+++.
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            4678999999999999999999999999999864

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=9.9e-09  Score=64.66  Aligned_cols=40  Identities=18%  Similarity=0.226  Sum_probs=36.3

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      .|+++|++++||.|.+|++.|.....|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   41 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPS   41 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCC
Confidence            4778899999999999999999999999999999987554

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=8.1e-09  Score=64.45  Aligned_cols=39  Identities=26%  Similarity=0.399  Sum_probs=35.6

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLA  229 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  229 (263)
                      .|+++|++++||.|++|++.|.....|..|+++|+++.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~   40 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSG   40 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCC
Confidence            477889999999999999999999999999999998754

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=1e-08  Score=64.67  Aligned_cols=39  Identities=18%  Similarity=0.447  Sum_probs=35.5

Q ss_pred             ccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          192 GDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       192 h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      |+++|+++++|.|.+|++.|.+...|..|+++|+++.+.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPS   41 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCC
Confidence            677888999999999999999999999999999987543

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=8.8e-09  Score=65.06  Aligned_cols=39  Identities=21%  Similarity=0.411  Sum_probs=35.5

Q ss_pred             ccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          192 GDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       192 h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      |+++|++++||.|++|++.|.+...|..|+++|+++.+.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPS   41 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCC
Confidence            677888999999999999999999999999999987543

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=9.5e-09  Score=64.68  Aligned_cols=39  Identities=21%  Similarity=0.286  Sum_probs=35.7

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLA  229 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  229 (263)
                      +|+++|++++||.|++|++.|.+...|..|+++|+++.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKC   40 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCS
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCC
Confidence            477889999999999999999999999999999998754

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=1e-08  Score=64.71  Aligned_cols=40  Identities=25%  Similarity=0.481  Sum_probs=36.2

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      .|+++|+++++|.|.+|++.|.+...|..|+++|+++.+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPS   41 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCC
Confidence            4778889999999999999999999999999999987553

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=9.6e-09  Score=64.65  Aligned_cols=40  Identities=20%  Similarity=0.392  Sum_probs=36.2

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      .|+++|+++++|.|.+|++.|.....|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   41 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPS   41 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCS
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCC
Confidence            4778888999999999999999999999999999987553

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=1e-08  Score=64.63  Aligned_cols=39  Identities=26%  Similarity=0.523  Sum_probs=35.4

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcC-CCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFT-YLA  229 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~-~~~  229 (263)
                      .|+++|++++||.|++|++.|.+...|..|+++|++ +.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKS   41 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTT
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCC
Confidence            377888899999999999999999999999999998 654

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=1e-08  Score=64.72  Aligned_cols=40  Identities=18%  Similarity=0.317  Sum_probs=36.0

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      +|+++|+++++|.|++|++.|.+...|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPS   41 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCS
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCC
Confidence            4778888999999999999999999999999999987543

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=1e-08  Score=64.62  Aligned_cols=39  Identities=23%  Similarity=0.428  Sum_probs=35.4

Q ss_pred             ccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          192 GDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       192 h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      |+++|++++||.|++|++.|.+...|..|+++|+++.+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPS   41 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCC
Confidence            678888999999999999999999999999999987543

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.68  E-value=1.3e-08  Score=64.26  Aligned_cols=39  Identities=21%  Similarity=0.350  Sum_probs=35.6

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLA  229 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  229 (263)
                      .|+++|+++++|.|++|++.|.+...|..|+++|+++.+
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKP   40 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            367888999999999999999999999999999998754

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=1.2e-08  Score=64.42  Aligned_cols=40  Identities=25%  Similarity=0.425  Sum_probs=36.0

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      .|+++|+++++|.|.+|++.|.+...|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPS   41 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSS
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCC
Confidence            3778888999999999999999999999999999987543

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=1.2e-08  Score=64.31  Aligned_cols=39  Identities=21%  Similarity=0.308  Sum_probs=35.4

Q ss_pred             ccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          192 GDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       192 h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      |+++|++++||.|++|++.|.+...|..|+++|+++.+.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPS   41 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCC
Confidence            678888999999999999999999999999999987543

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=1.1e-08  Score=64.50  Aligned_cols=39  Identities=21%  Similarity=0.279  Sum_probs=35.4

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLA  229 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  229 (263)
                      .|+++|+++++|.|++|++.|.+...|..|+++|+++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKP   40 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCS
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCC
Confidence            367888899999999999999999999999999998754

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=8e-09  Score=65.18  Aligned_cols=40  Identities=28%  Similarity=0.468  Sum_probs=36.2

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      .|+++|++++||.|++|++.|.+...|..|+++|+++.+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSS   41 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            4778899999999999999999999999999999987543

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=1.1e-08  Score=64.42  Aligned_cols=40  Identities=23%  Similarity=0.440  Sum_probs=36.0

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      .|+++|+++++|.|++|++.|.+...|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPS   41 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCS
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCC
Confidence            4778889999999999999999999999999999987543

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.67  E-value=1.2e-08  Score=60.03  Aligned_cols=34  Identities=21%  Similarity=0.219  Sum_probs=31.1

Q ss_pred             cccCCcceecCccccccCCchhhhhHhhhhcCCC
Q 038614          195 VVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYL  228 (263)
Q Consensus       195 ~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  228 (263)
                      +|+++++|.|.+|++.|.+...|..|+++|+++.
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            3678999999999999999999999999998763

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=9.9e-09  Score=61.79  Aligned_cols=34  Identities=15%  Similarity=0.214  Sum_probs=31.6

Q ss_pred             ccccCCcceecCccccccCCchhhhhH-hhhhcCC
Q 038614          194 AVVMDQRVFKCPFCDKVFDSGQALGGH-KKIHFTY  227 (263)
Q Consensus       194 ~~h~g~kp~~C~~Cgk~F~~~~~L~~H-~r~H~~~  227 (263)
                      ++|++++||+|++|++.|.+...|..| +++|++.
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            568899999999999999999999999 9999875

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=1.1e-08  Score=62.86  Aligned_cols=32  Identities=28%  Similarity=0.437  Sum_probs=29.7

Q ss_pred             ccCCcceecCc--cccccCCchhhhhHhhhhcCC
Q 038614          196 VMDQRVFKCPF--CDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       196 h~g~kp~~C~~--Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      ++++|||+|++  |++.|.+.+.|..|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            56899999986  999999999999999999975

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=1e-08  Score=64.55  Aligned_cols=40  Identities=20%  Similarity=0.410  Sum_probs=36.3

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      .|+++|++++||.|++|++.|.....|..|+++|+++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPS   41 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCC
Confidence            4778899999999999999999999999999999987543

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=1.4e-08  Score=63.91  Aligned_cols=39  Identities=15%  Similarity=0.270  Sum_probs=35.5

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLA  229 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  229 (263)
                      .|+++|++++||.|++|++.|.+...|..|+++|+++.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKN   40 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCC
Confidence            367888999999999999999999999999999998754

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=1.2e-08  Score=64.30  Aligned_cols=40  Identities=18%  Similarity=0.374  Sum_probs=36.0

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      .|+++|+++++|.|++|++.|.....|..|+++|+++.+.
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPS   41 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCS
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCC
Confidence            4778889999999999999999999999999999987543

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=1.1e-08  Score=64.39  Aligned_cols=39  Identities=23%  Similarity=0.388  Sum_probs=35.5

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLA  229 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  229 (263)
                      .|+++|+++++|.|++|++.|.+...|..|+++|+++.+
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERP   40 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCS
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCC
Confidence            377888899999999999999999999999999998754

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=1.2e-08  Score=64.39  Aligned_cols=38  Identities=18%  Similarity=0.401  Sum_probs=35.0

Q ss_pred             ccccccCCcceecCccccccCCchhhhhHhhhhcCCCC
Q 038614          192 GDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLA  229 (263)
Q Consensus       192 h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  229 (263)
                      |+++|++++||.|++|++.|.+...|..|+++|+++.+
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRP   40 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCC
Confidence            67788899999999999999999999999999998754

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.64  E-value=1.6e-08  Score=63.17  Aligned_cols=38  Identities=18%  Similarity=0.301  Sum_probs=34.8

Q ss_pred             ccccccCCcceecCccccccCCchhhhhHhhhhcCCCC
Q 038614          192 GDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLA  229 (263)
Q Consensus       192 h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  229 (263)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++.+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESG   40 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCC
Confidence            67788899999999999999999999999999998754

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=1.6e-08  Score=63.80  Aligned_cols=38  Identities=18%  Similarity=0.314  Sum_probs=35.0

Q ss_pred             ccccccCCcceecCccccccCCchhhhhHhhhhcCCCC
Q 038614          192 GDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLA  229 (263)
Q Consensus       192 h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  229 (263)
                      |+++|+++++|.|++|++.|.....|..|+++|+++.+
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKL   40 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCC
Confidence            67788899999999999999999999999999998754

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=1.7e-08  Score=60.44  Aligned_cols=34  Identities=29%  Similarity=0.456  Sum_probs=31.4

Q ss_pred             ccccCCcceecCccccccCCc-hhhhhHhhhhcCC
Q 038614          194 AVVMDQRVFKCPFCDKVFDSG-QALGGHKKIHFTY  227 (263)
Q Consensus       194 ~~h~g~kp~~C~~Cgk~F~~~-~~L~~H~r~H~~~  227 (263)
                      ++|++++||.|++|++.|.+. ..|..|+++|+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            467889999999999999999 9999999999875

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.62  E-value=1.2e-08  Score=61.08  Aligned_cols=36  Identities=22%  Similarity=0.368  Sum_probs=33.4

Q ss_pred             cccCCCCccccCcccccccChhhhhhhhhhcCCCcc
Q 038614          144 SLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKI  179 (263)
Q Consensus       144 ~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp  179 (263)
                      ++|+++++|+|..|++.|.....|..|+++|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            468899999999999999999999999999998764

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.61  E-value=2.3e-08  Score=63.05  Aligned_cols=39  Identities=18%  Similarity=0.274  Sum_probs=35.4

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhh-hhcCCCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKK-IHFTYLA  229 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r-~H~~~~~  229 (263)
                      .|+++|++++||.|++|++.|.+...|..|++ +|+++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~   41 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKP   41 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCS
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCC
Confidence            37788899999999999999999999999999 9998754

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.61  E-value=1.6e-08  Score=61.41  Aligned_cols=37  Identities=41%  Similarity=0.726  Sum_probs=33.2

Q ss_pred             cCCCCccccCcccccccChhhhhhhhhhcCCCccccc
Q 038614          146 VSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHN  182 (263)
Q Consensus       146 h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~  182 (263)
                      |+++++|+|.+|++.|.....|..|+++|+++++|.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            5678999999999999999999999999999988753

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=2.4e-08  Score=59.23  Aligned_cols=33  Identities=21%  Similarity=0.290  Sum_probs=30.9

Q ss_pred             cccCCcceecCccccccCCchhhhhHhhhhcCC
Q 038614          195 VVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       195 ~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      +|++++||.|.+|++.|.....|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            577899999999999999999999999999875

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.60  E-value=2.1e-08  Score=59.97  Aligned_cols=36  Identities=17%  Similarity=0.438  Sum_probs=33.5

Q ss_pred             hhcccCCCCccccCcccccccChhhhhhhhhhcCCC
Q 038614          142 ESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKI  177 (263)
Q Consensus       142 h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~  177 (263)
                      |+++|++++||+|..|++.|.....|..|+++|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            677899999999999999999999999999999864

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=2.2e-08  Score=59.55  Aligned_cols=34  Identities=15%  Similarity=0.331  Sum_probs=31.1

Q ss_pred             ccccCCcceecCccccccCCchhhhhHhhhhcCC
Q 038614          194 AVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       194 ~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      +.|++++||.|.+|++.|.....|..|+++|+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            2 SSGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CCSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            3577899999999999999999999999999875

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=2.4e-08  Score=59.40  Aligned_cols=34  Identities=26%  Similarity=0.393  Sum_probs=31.2

Q ss_pred             ccccCCcceecCccccccCCchhhhhHhhhhcCC
Q 038614          194 AVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       194 ~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      +.|++++||+|++|++.|.+...|..|+++|+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            3577899999999999999999999999999875

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=2.9e-08  Score=62.22  Aligned_cols=39  Identities=26%  Similarity=0.437  Sum_probs=34.8

Q ss_pred             ccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          192 GDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       192 h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      +.++|+++++|.|.+|++.|.+...|..|+++|+++.+.
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (45)
T 2epu_A            3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSG   41 (45)
T ss_dssp             CCCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCC
T ss_pred             CCCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCC
Confidence            456788999999999999999999999999999987543

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.58  E-value=3.2e-08  Score=60.68  Aligned_cols=36  Identities=31%  Similarity=0.453  Sum_probs=33.0

Q ss_pred             ccccCCcceecCccccccCCchhhhhHhhhhcCCCC
Q 038614          194 AVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLA  229 (263)
Q Consensus       194 ~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  229 (263)
                      ++|++++||.|++|++.|.....|..|+++|+++.+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   38 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGP   38 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCC
Confidence            568899999999999999999999999999998753

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.57  E-value=2.1e-08  Score=64.23  Aligned_cols=35  Identities=17%  Similarity=0.321  Sum_probs=30.0

Q ss_pred             cccCCcceecCccccccCCchhhhhHhh-hhcCCCC
Q 038614          195 VVMDQRVFKCPFCDKVFDSGQALGGHKK-IHFTYLA  229 (263)
Q Consensus       195 ~h~g~kp~~C~~Cgk~F~~~~~L~~H~r-~H~~~~~  229 (263)
                      +|++++||.|.+|++.|.....|..|++ +|+++..
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            4789999999999999999999999999 9998753

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.57  E-value=3.6e-08  Score=62.15  Aligned_cols=39  Identities=21%  Similarity=0.337  Sum_probs=34.9

Q ss_pred             ccccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          192 GDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       192 h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      ++++|+++++|.|++|++.|.+...|..|+++|+++.+.
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eom_A            3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPS   41 (46)
T ss_dssp             CCCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCS
T ss_pred             CCCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCC
Confidence            356788999999999999999999999999999987654

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.57  E-value=3.6e-08  Score=58.43  Aligned_cols=33  Identities=27%  Similarity=0.433  Sum_probs=30.8

Q ss_pred             cccCCcceecCccccccCCchhhhhHhhhhcCC
Q 038614          195 VVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       195 ~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      .|+++++|.|++|++.|.+...|..|+++|+++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            467899999999999999999999999999875

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.57  E-value=1.7e-08  Score=69.82  Aligned_cols=57  Identities=14%  Similarity=0.244  Sum_probs=51.2

Q ss_pred             ccCCccccCCC--CCCCcccccchhhhhcccCCCCccccCc--ccccccChhhhhhhhhhc
Q 038614          118 DEDEYVRGKSD--DGDNDEEEDKEEDESSLVSRTNKYKCKT--CKKEFRSYQALGGHKASH  174 (263)
Q Consensus       118 ~~~~~~~~c~~--c~~~~~~~~~~~~h~~~h~~~kp~kC~~--C~k~F~s~~~L~~H~~~H  174 (263)
                      ......+.|..  |++.|.....|..|+++|+++++|+|.+  |++.|.....|..|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            34456788987  9999999999999999999999999965  999999999999999876

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.55  E-value=3e-08  Score=58.48  Aligned_cols=35  Identities=17%  Similarity=0.291  Sum_probs=32.2

Q ss_pred             ccCCCCccccCcccccccChhhhhhhhhhcCCCcc
Q 038614          145 LVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKI  179 (263)
Q Consensus       145 ~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp  179 (263)
                      +|+++++|+|..|++.|.....|..|+++|++++|
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            47889999999999999999999999999998764

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.55  E-value=2.7e-08  Score=58.49  Aligned_cols=35  Identities=26%  Similarity=0.296  Sum_probs=32.1

Q ss_pred             ccCCCCccccCcccccccChhhhhhhhhhcCCCcc
Q 038614          145 LVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIKI  179 (263)
Q Consensus       145 ~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp  179 (263)
                      +|+++++|+|..|++.|.+...|..|+++|++++|
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            37789999999999999999999999999998764

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=98.55  E-value=1.3e-08  Score=78.42  Aligned_cols=59  Identities=15%  Similarity=0.038  Sum_probs=54.6

Q ss_pred             eccCCccccCCCCCCCcccccchhhhhcccCCCCccccCcccccccChhhhhhhhhhcCCC
Q 038614          117 VDEDEYVRGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKI  177 (263)
Q Consensus       117 ~~~~~~~~~c~~c~~~~~~~~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~  177 (263)
                      .+.++.++.|..|++.|.....|..|+++|  +++|+|..|++.|.....|..|+++|++.
T Consensus        68 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           68 ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            455678899999999999999999999999  88999999999999999999999999875

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=4.9e-08  Score=61.35  Aligned_cols=38  Identities=26%  Similarity=0.504  Sum_probs=34.3

Q ss_pred             ccccccCCcceecCccccccCCchhhhhHhhhhcCCCC
Q 038614          192 GDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLA  229 (263)
Q Consensus       192 h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  229 (263)
                      ++++|+++++|.|.+|++.|.+...|..|+++|+++.+
T Consensus         3 ~~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKP   40 (46)
T ss_dssp             CCCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCC
T ss_pred             CCCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCC
Confidence            45678899999999999999999999999999998754

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.53  E-value=4.3e-08  Score=59.45  Aligned_cols=34  Identities=41%  Similarity=0.776  Sum_probs=30.7

Q ss_pred             ccCCcceecCccccccCCchhhhhHhhhhcCCCC
Q 038614          196 VMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLA  229 (263)
Q Consensus       196 h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  229 (263)
                      |++++||.|.+|++.|.....|..|+++|+++.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   34 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRA   34 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcc
Confidence            5688999999999999999999999999998754

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.52  E-value=6.3e-08  Score=60.16  Aligned_cols=37  Identities=19%  Similarity=0.228  Sum_probs=33.5

Q ss_pred             ccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          194 AVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       194 ~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      ++|+++++|.|.+|++.|.....|..|+++|+++.+.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   39 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSG   39 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCS
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCc
Confidence            5688999999999999999999999999999987543

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=6.2e-08  Score=57.51  Aligned_cols=33  Identities=30%  Similarity=0.654  Sum_probs=30.3

Q ss_pred             cccCCcceecCccccccCCchhhhhHhhhhcCC
Q 038614          195 VVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       195 ~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      .|.+++||.|++|++.|.....|..|+++|+++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            356889999999999999999999999999875

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.48  E-value=6.8e-08  Score=67.21  Aligned_cols=38  Identities=29%  Similarity=0.293  Sum_probs=34.0

Q ss_pred             cCCCCccccCc--ccccccChhhhhhhh-hhcCCCcccccC
Q 038614          146 VSRTNKYKCKT--CKKEFRSYQALGGHK-ASHKKIKIHHNG  183 (263)
Q Consensus       146 h~~~kp~kC~~--C~k~F~s~~~L~~H~-~~H~~~kp~~~~  183 (263)
                      ++++|||+|..  |+|.|.+..+|..|+ ++|+++|||.|.
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            57999999975  999999999999997 789999988754

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.47  E-value=5.9e-08  Score=61.08  Aligned_cols=37  Identities=19%  Similarity=0.297  Sum_probs=33.8

Q ss_pred             cccccCCcceecCccccccCCchhhhhHhhhhcCCCC
Q 038614          193 DAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLA  229 (263)
Q Consensus       193 ~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  229 (263)
                      +++|+++++|.|.+|++.|.+...|..|+++|+++.+
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKP   40 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            5678899999999999999999999999999998754

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.46  E-value=4.9e-08  Score=63.90  Aligned_cols=46  Identities=11%  Similarity=-0.027  Sum_probs=41.7

Q ss_pred             ccCCccccCCCCCCCcccccchhhhhc-ccCCCCccccCcccccccC
Q 038614          118 DEDEYVRGKSDDGDNDEEEDKEEDESS-LVSRTNKYKCKTCKKEFRS  163 (263)
Q Consensus       118 ~~~~~~~~c~~c~~~~~~~~~~~~h~~-~h~~~kp~kC~~C~k~F~s  163 (263)
                      +.++.++.|..|++.|.....|..|++ +|+++++|+|.+|++.|.+
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            345678899999999999999999987 9999999999999999976

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.44  E-value=9.5e-08  Score=60.71  Aligned_cols=38  Identities=21%  Similarity=0.373  Sum_probs=33.6

Q ss_pred             ccccccccCCcceecC--ccccccCCchhhhhHhhhhcCC
Q 038614          190 AGGDAVVMDQRVFKCP--FCDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       190 ~~h~~~h~g~kp~~C~--~Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      +.|...|++++||.|.  .|++.|.....|..|+++|+++
T Consensus         7 ~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            7 IDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             GGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            4456678899999996  7999999999999999999875

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.43  E-value=1.1e-07  Score=59.41  Aligned_cols=37  Identities=16%  Similarity=0.378  Sum_probs=33.5

Q ss_pred             ccccCCcceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          194 AVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       194 ~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      .+|++++||.|++|++.|.....|..|+++|+++.+.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~   39 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGK   39 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCC
Confidence            4678999999999999999999999999999987654

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.41  E-value=9.6e-08  Score=55.92  Aligned_cols=32  Identities=25%  Similarity=0.479  Sum_probs=29.7

Q ss_pred             CccccCcccccccChhhhhhhhhhcCCCcccc
Q 038614          150 NKYKCKTCKKEFRSYQALGGHKASHKKIKIHH  181 (263)
Q Consensus       150 kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~  181 (263)
                      +||.|.+|++.|.....|..|+++|+++++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            58999999999999999999999999998874

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.41  E-value=1e-07  Score=56.51  Aligned_cols=34  Identities=21%  Similarity=0.314  Sum_probs=31.2

Q ss_pred             ccCCCCccccCcccccccChhhhhhhhhhcCCCc
Q 038614          145 LVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIK  178 (263)
Q Consensus       145 ~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~k  178 (263)
                      .|+++++|+|.+|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            4778999999999999999999999999998764

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.40  E-value=7.7e-08  Score=57.45  Aligned_cols=35  Identities=29%  Similarity=0.338  Sum_probs=31.9

Q ss_pred             cccCCCCccccCcccccccCh-hhhhhhhhhcCCCc
Q 038614          144 SLVSRTNKYKCKTCKKEFRSY-QALGGHKASHKKIK  178 (263)
Q Consensus       144 ~~h~~~kp~kC~~C~k~F~s~-~~L~~H~~~H~~~k  178 (263)
                      ++|+++++|+|..|++.|... ..|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            468899999999999999999 99999999998764

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.40  E-value=1.3e-07  Score=56.68  Aligned_cols=32  Identities=22%  Similarity=0.389  Sum_probs=29.6

Q ss_pred             ccCCcceecCc--cccccCCchhhhhHhhhhcCC
Q 038614          196 VMDQRVFKCPF--CDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       196 h~g~kp~~C~~--Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      |++++||.|.+  |++.|...+.|..|+++|+++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            67899999995  999999999999999999875

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.39  E-value=4.5e-07  Score=62.58  Aligned_cols=34  Identities=24%  Similarity=0.439  Sum_probs=31.3

Q ss_pred             cccCCcceecCccccccCCchhhhhHhhhhcCCC
Q 038614          195 VVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYL  228 (263)
Q Consensus       195 ~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  228 (263)
                      .+.++|||+|.+|+|.|.+...|..|+++|+++.
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            4667999999999999999999999999999874

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.39  E-value=1.2e-07  Score=56.14  Aligned_cols=34  Identities=29%  Similarity=0.409  Sum_probs=31.3

Q ss_pred             ccCCCCccccCcccccccChhhhhhhhhhcCCCc
Q 038614          145 LVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIK  178 (263)
Q Consensus       145 ~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~k  178 (263)
                      .|+++++|+|.+|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            4788999999999999999999999999998764

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.39  E-value=6e-08  Score=56.34  Aligned_cols=31  Identities=23%  Similarity=0.390  Sum_probs=29.0

Q ss_pred             CccccCcccccccChhhhhhhhhhcCCCccc
Q 038614          150 NKYKCKTCKKEFRSYQALGGHKASHKKIKIH  180 (263)
Q Consensus       150 kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~  180 (263)
                      +||+|..|++.|.....|..|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            5899999999999999999999999998876

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.38  E-value=1.2e-07  Score=56.04  Aligned_cols=34  Identities=26%  Similarity=0.289  Sum_probs=31.3

Q ss_pred             ccCCCCccccCcccccccChhhhhhhhhhcCCCc
Q 038614          145 LVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIK  178 (263)
Q Consensus       145 ~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~k  178 (263)
                      +|+++++|+|..|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            4788999999999999999999999999998764

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.38  E-value=9.8e-08  Score=57.26  Aligned_cols=34  Identities=26%  Similarity=0.357  Sum_probs=31.4

Q ss_pred             cccCCCCccccCcccccccChhhhhhh-hhhcCCC
Q 038614          144 SLVSRTNKYKCKTCKKEFRSYQALGGH-KASHKKI  177 (263)
Q Consensus       144 ~~h~~~kp~kC~~C~k~F~s~~~L~~H-~~~H~~~  177 (263)
                      ++|++++||+|..|++.|.....|..| +++|+++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            568899999999999999999999999 9999864

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.38  E-value=1.6e-07  Score=55.49  Aligned_cols=34  Identities=29%  Similarity=0.371  Sum_probs=31.3

Q ss_pred             ccCCCCccccCcccccccChhhhhhhhhhcCCCc
Q 038614          145 LVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIK  178 (263)
Q Consensus       145 ~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~k  178 (263)
                      +|+++++|+|.+|++.|.....|..|+++|++++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            4778999999999999999999999999999764

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.37  E-value=1.7e-07  Score=54.75  Aligned_cols=30  Identities=30%  Similarity=0.458  Sum_probs=27.8

Q ss_pred             cceecCccccccCCchhhhhHhhhhcCCCC
Q 038614          200 RVFKCPFCDKVFDSGQALGGHKKIHFTYLA  229 (263)
Q Consensus       200 kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  229 (263)
                      +||.|++|++.|.....|..|+++|+++.+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~   30 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGE   30 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCC
Confidence            589999999999999999999999998754

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.36  E-value=1.4e-07  Score=57.82  Aligned_cols=32  Identities=25%  Similarity=0.284  Sum_probs=29.8

Q ss_pred             cCCCCccccCc--ccccccChhhhhhhhhhcCCC
Q 038614          146 VSRTNKYKCKT--CKKEFRSYQALGGHKASHKKI  177 (263)
Q Consensus       146 h~~~kp~kC~~--C~k~F~s~~~L~~H~~~H~~~  177 (263)
                      +++++||+|.+  |+|.|.....|..|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            67899999986  999999999999999999975

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.35  E-value=2.4e-07  Score=55.52  Aligned_cols=34  Identities=29%  Similarity=0.475  Sum_probs=30.5

Q ss_pred             ccCCcceecC--ccccccCCchhhhhHhhhhcCCCC
Q 038614          196 VMDQRVFKCP--FCDKVFDSGQALGGHKKIHFTYLA  229 (263)
Q Consensus       196 h~g~kp~~C~--~Cgk~F~~~~~L~~H~r~H~~~~~  229 (263)
                      |++++||.|.  .|++.|.+...|..|+++|+++.+
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~   36 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLK   36 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCC
Confidence            5689999999  599999999999999999998643

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.35  E-value=2.6e-07  Score=58.35  Aligned_cols=39  Identities=18%  Similarity=0.350  Sum_probs=34.7

Q ss_pred             ccccccCCcceecC--ccccccCCchhhhhHhhhhcCCCCC
Q 038614          192 GDAVVMDQRVFKCP--FCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       192 h~~~h~g~kp~~C~--~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      |.++|+++++|.|.  +|++.|.....|..|+++|+++.+.
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   43 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPS   43 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            56788899999998  8999999999999999999987543

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.35  E-value=1.8e-07  Score=52.02  Aligned_cols=28  Identities=25%  Similarity=0.602  Sum_probs=26.1

Q ss_pred             CcceecCccccccCCchhhhhHhhhhcC
Q 038614          199 QRVFKCPFCDKVFDSGQALGGHKKIHFT  226 (263)
Q Consensus       199 ~kp~~C~~Cgk~F~~~~~L~~H~r~H~~  226 (263)
                      ++||.|++|++.|.+...|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4799999999999999999999999974

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.35  E-value=1.3e-07  Score=56.83  Aligned_cols=35  Identities=23%  Similarity=0.431  Sum_probs=32.2

Q ss_pred             cCCCCccccC--cccccccChhhhhhhhhhcCCCccc
Q 038614          146 VSRTNKYKCK--TCKKEFRSYQALGGHKASHKKIKIH  180 (263)
Q Consensus       146 h~~~kp~kC~--~C~k~F~s~~~L~~H~~~H~~~kp~  180 (263)
                      |+++++|+|.  .|++.|.....|..|+++|+++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            5688999999  5999999999999999999998876

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.34  E-value=2e-07  Score=51.46  Aligned_cols=27  Identities=22%  Similarity=0.447  Sum_probs=25.4

Q ss_pred             CcceecCccccccCCchhhhhHhhhhc
Q 038614          199 QRVFKCPFCDKVFDSGQALGGHKKIHF  225 (263)
Q Consensus       199 ~kp~~C~~Cgk~F~~~~~L~~H~r~H~  225 (263)
                      ++||.|++|++.|.+...|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            479999999999999999999999985

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.33  E-value=2.9e-07  Score=64.00  Aligned_cols=37  Identities=24%  Similarity=0.282  Sum_probs=32.1

Q ss_pred             ccCCcceecCc--cccccCCchhhhhHh-hhhcCCCCCCC
Q 038614          196 VMDQRVFKCPF--CDKVFDSGQALGGHK-KIHFTYLATPI  232 (263)
Q Consensus       196 h~g~kp~~C~~--Cgk~F~~~~~L~~H~-r~H~~~~~~~~  232 (263)
                      ++|+|||+|.+  |+|+|.+.+.|..|+ ++|+++.+.-.
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~   61 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFS   61 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCC
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccc
Confidence            56899999975  999999999999997 68999876543

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.32  E-value=2.9e-07  Score=51.44  Aligned_cols=28  Identities=32%  Similarity=0.456  Sum_probs=26.4

Q ss_pred             cceecCccccccCCchhhhhHhhhhcCC
Q 038614          200 RVFKCPFCDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       200 kp~~C~~Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      +||.|++|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            5899999999999999999999999875

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.32  E-value=2.7e-07  Score=51.74  Aligned_cols=29  Identities=21%  Similarity=0.487  Sum_probs=27.1

Q ss_pred             CcceecCccccccCCchhhhhHhhhhcCC
Q 038614          199 QRVFKCPFCDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       199 ~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      ++||.|.+|++.|.....|..|+++|+++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            47999999999999999999999999875

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.32  E-value=1.8e-07  Score=59.74  Aligned_cols=35  Identities=29%  Similarity=0.451  Sum_probs=30.0

Q ss_pred             ccCCCCccccCcccccccChhhhhhhhh-hcCCCcc
Q 038614          145 LVSRTNKYKCKTCKKEFRSYQALGGHKA-SHKKIKI  179 (263)
Q Consensus       145 ~h~~~kp~kC~~C~k~F~s~~~L~~H~~-~H~~~kp  179 (263)
                      +|+++++|+|.+|++.|.....|..|++ +|+++..
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            4789999999999999999999999999 9998753

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.31  E-value=1.8e-07  Score=51.89  Aligned_cols=27  Identities=22%  Similarity=0.486  Sum_probs=25.3

Q ss_pred             CcceecCccccccCCchhhhhHhhhhc
Q 038614          199 QRVFKCPFCDKVFDSGQALGGHKKIHF  225 (263)
Q Consensus       199 ~kp~~C~~Cgk~F~~~~~L~~H~r~H~  225 (263)
                      ++||.|++|++.|.....|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            479999999999999999999999985

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.29  E-value=3.5e-07  Score=50.98  Aligned_cols=28  Identities=29%  Similarity=0.585  Sum_probs=26.3

Q ss_pred             cceecCccccccCCchhhhhHhhhhcCC
Q 038614          200 RVFKCPFCDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       200 kp~~C~~Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      +||.|++|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            5899999999999999999999999875

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.28  E-value=2.7e-07  Score=54.60  Aligned_cols=34  Identities=26%  Similarity=0.426  Sum_probs=30.8

Q ss_pred             ccCCCCccccCcccccccChhhhhhhhhhcCCCc
Q 038614          145 LVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIK  178 (263)
Q Consensus       145 ~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~k  178 (263)
                      .|.++++|+|..|++.|.....|..|+++|++++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            3678899999999999999999999999998764

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.28  E-value=3.4e-07  Score=50.86  Aligned_cols=28  Identities=43%  Similarity=0.770  Sum_probs=26.4

Q ss_pred             cceecCccccccCCchhhhhHhhhhcCC
Q 038614          200 RVFKCPFCDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       200 kp~~C~~Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      +||.|++|++.|.+...|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            5899999999999999999999999875

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.26  E-value=1.1e-07  Score=55.14  Aligned_cols=30  Identities=40%  Similarity=0.663  Sum_probs=27.6

Q ss_pred             cceecCccccccCCchhhhhHhhhhcCCCC
Q 038614          200 RVFKCPFCDKVFDSGQALGGHKKIHFTYLA  229 (263)
Q Consensus       200 kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  229 (263)
                      +||.|.+|++.|.....|..|+++|+++.+
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp   30 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVA   30 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSS
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCC
Confidence            589999999999999999999999998754

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.25  E-value=6.1e-07  Score=51.50  Aligned_cols=29  Identities=38%  Similarity=0.571  Sum_probs=27.1

Q ss_pred             CcceecC--ccccccCCchhhhhHhhhhcCC
Q 038614          199 QRVFKCP--FCDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       199 ~kp~~C~--~Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      ++||.|.  .|++.|.....|..|+++|+++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            4799999  8999999999999999999975

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.25  E-value=3.9e-07  Score=50.72  Aligned_cols=28  Identities=32%  Similarity=0.500  Sum_probs=26.4

Q ss_pred             cceecCccccccCCchhhhhHhhhhcCC
Q 038614          200 RVFKCPFCDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       200 kp~~C~~Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      +||.|.+|++.|.....|..|+++|+++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCC
Confidence            5899999999999999999999999875

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.25  E-value=4.2e-07  Score=49.90  Aligned_cols=27  Identities=30%  Similarity=0.767  Sum_probs=24.2

Q ss_pred             ceecCccccccCCchhhhhHhhhhcCC
Q 038614          201 VFKCPFCDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       201 p~~C~~Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      ||.|.+|++.|.+...|..|+++|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            689999999999999999999999863

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.24  E-value=1.5e-07  Score=63.58  Aligned_cols=55  Identities=9%  Similarity=0.101  Sum_probs=46.0

Q ss_pred             ceeeccCCccccCCCCCCCcccccchhhhhcccCCCCccccCcccccccChhhhhhhh
Q 038614          114 EAVVDEDEYVRGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHK  171 (263)
Q Consensus       114 ~~~~~~~~~~~~c~~c~~~~~~~~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~  171 (263)
                      +..++.++.+|.|..|++.|.....|.   ++|+++++|+|..|++.|.....+..+.
T Consensus         5 h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~~~~   59 (62)
T 1vd4_A            5 DERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAMPKK   59 (62)
T ss_dssp             CSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCSCCC
T ss_pred             HHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccccccc
Confidence            344566788999999999999877664   7899999999999999999888776553

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.22  E-value=2.7e-07  Score=58.59  Aligned_cols=41  Identities=7%  Similarity=-0.124  Sum_probs=37.9

Q ss_pred             cCCccccCCCCCCCcccccchhhhhcccCCCCccccCcccc
Q 038614          119 EDEYVRGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKK  159 (263)
Q Consensus       119 ~~~~~~~c~~c~~~~~~~~~~~~h~~~h~~~kp~kC~~C~k  159 (263)
                      ....++.|..|++.|.....|..|+++|+++++|+|.+|+|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            8 RTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            44567899999999999999999999999999999999986

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.20  E-value=7.6e-07  Score=49.79  Aligned_cols=28  Identities=18%  Similarity=0.483  Sum_probs=26.3

Q ss_pred             cceecCccccccCCchhhhhHhhhhcCC
Q 038614          200 RVFKCPFCDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       200 kp~~C~~Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      +||.|.+|++.|.....|..|+++|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccC
Confidence            5899999999999999999999999875

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.19  E-value=6.6e-07  Score=51.02  Aligned_cols=28  Identities=36%  Similarity=0.707  Sum_probs=26.2

Q ss_pred             cceecC--ccccccCCchhhhhHhhhhcCC
Q 038614          200 RVFKCP--FCDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       200 kp~~C~--~Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      +||.|+  .|++.|.....|..|+++|+++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            589998  9999999999999999999875

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.50  E-value=2e-07  Score=52.31  Aligned_cols=28  Identities=25%  Similarity=0.500  Sum_probs=26.2

Q ss_pred             cceecCccccccCCchhhhhHhhhhcCC
Q 038614          200 RVFKCPFCDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       200 kp~~C~~Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      +||.|.+|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            5899999999999999999999999875

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.49  E-value=2e-07  Score=52.43  Aligned_cols=29  Identities=28%  Similarity=0.526  Sum_probs=26.8

Q ss_pred             CcceecCccccccCCchhhhhHhhhhcCC
Q 038614          199 QRVFKCPFCDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       199 ~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      ++||.|..|++.|.....|..|+++|+++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            47899999999999999999999999874

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.16  E-value=4.7e-07  Score=57.40  Aligned_cols=38  Identities=18%  Similarity=0.387  Sum_probs=33.6

Q ss_pred             hhhcccCCCCccccC--cccccccChhhhhhhhhhcCCCc
Q 038614          141 DESSLVSRTNKYKCK--TCKKEFRSYQALGGHKASHKKIK  178 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~--~C~k~F~s~~~L~~H~~~H~~~k  178 (263)
                      .+...|++++||+|.  .|++.|.....|..|+++|++++
T Consensus         8 ~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            8 DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            455669999999996  79999999999999999999864

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.16  E-value=5.7e-07  Score=53.78  Aligned_cols=33  Identities=18%  Similarity=0.333  Sum_probs=30.2

Q ss_pred             cCCCCccccCc--ccccccChhhhhhhhhhcCCCc
Q 038614          146 VSRTNKYKCKT--CKKEFRSYQALGGHKASHKKIK  178 (263)
Q Consensus       146 h~~~kp~kC~~--C~k~F~s~~~L~~H~~~H~~~k  178 (263)
                      |+++++|.|.+  |++.|.....|..|+++|++++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            67899999994  9999999999999999999864

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.45  E-value=2.6e-07  Score=50.57  Aligned_cols=26  Identities=27%  Similarity=0.519  Sum_probs=24.5

Q ss_pred             cceecCccccccCCchhhhhHhhhhc
Q 038614          200 RVFKCPFCDKVFDSGQALGGHKKIHF  225 (263)
Q Consensus       200 kp~~C~~Cgk~F~~~~~L~~H~r~H~  225 (263)
                      |||.|++|++.|.+...|..|+++|.
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            58999999999999999999999984

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.14  E-value=9.6e-07  Score=49.61  Aligned_cols=28  Identities=29%  Similarity=0.659  Sum_probs=26.0

Q ss_pred             cceecCccccccCCchhhhhH-hhhhcCC
Q 038614          200 RVFKCPFCDKVFDSGQALGGH-KKIHFTY  227 (263)
Q Consensus       200 kp~~C~~Cgk~F~~~~~L~~H-~r~H~~~  227 (263)
                      +||.|..|++.|.+...|..| +++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            589999999999999999999 7999875

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.13  E-value=8.9e-07  Score=49.50  Aligned_cols=30  Identities=23%  Similarity=0.472  Sum_probs=27.4

Q ss_pred             CCccccCcccccccChhhhhhhhhhcCCCc
Q 038614          149 TNKYKCKTCKKEFRSYQALGGHKASHKKIK  178 (263)
Q Consensus       149 ~kp~kC~~C~k~F~s~~~L~~H~~~H~~~k  178 (263)
                      +++|.|..|++.|.....|..|+++|++++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            478999999999999999999999998764

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.12  E-value=8.9e-07  Score=53.56  Aligned_cols=29  Identities=24%  Similarity=0.457  Sum_probs=26.1

Q ss_pred             ccCCcceecCccccccCCchhhhhHhhhh
Q 038614          196 VMDQRVFKCPFCDKVFDSGQALGGHKKIH  224 (263)
Q Consensus       196 h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H  224 (263)
                      +.|+|||.|++|+|+|.+.+.|..|+..+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~py~   31 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQAYY   31 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHHHHT
T ss_pred             CCCccCeECCCCCCccCCHhHccCcCCeE
Confidence            46899999999999999999999999544

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.09  E-value=1.3e-06  Score=48.58  Aligned_cols=29  Identities=28%  Similarity=0.587  Sum_probs=26.6

Q ss_pred             CccccCcccccccChhhhhhhhhhcCCCc
Q 038614          150 NKYKCKTCKKEFRSYQALGGHKASHKKIK  178 (263)
Q Consensus       150 kp~kC~~C~k~F~s~~~L~~H~~~H~~~k  178 (263)
                      ++|.|..|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            47999999999999999999999998763

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.08  E-value=1.1e-06  Score=48.91  Aligned_cols=29  Identities=31%  Similarity=0.498  Sum_probs=26.6

Q ss_pred             CccccCcccccccChhhhhhhhhhcCCCc
Q 038614          150 NKYKCKTCKKEFRSYQALGGHKASHKKIK  178 (263)
Q Consensus       150 kp~kC~~C~k~F~s~~~L~~H~~~H~~~k  178 (263)
                      +||.|..|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            57999999999999999999999998763

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.06  E-value=1.6e-06  Score=59.69  Aligned_cols=34  Identities=24%  Similarity=0.358  Sum_probs=31.4

Q ss_pred             ccCCCCccccCcccccccChhhhhhhhhhcCCCc
Q 038614          145 LVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIK  178 (263)
Q Consensus       145 ~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~k  178 (263)
                      .+.+++||+|..|+|.|.+...|..|+++|+++.
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            4678999999999999999999999999999865

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.04  E-value=2.3e-06  Score=48.96  Aligned_cols=30  Identities=33%  Similarity=0.597  Sum_probs=27.3

Q ss_pred             CCccccC--cccccccChhhhhhhhhhcCCCc
Q 038614          149 TNKYKCK--TCKKEFRSYQALGGHKASHKKIK  178 (263)
Q Consensus       149 ~kp~kC~--~C~k~F~s~~~L~~H~~~H~~~k  178 (263)
                      ++||.|.  .|++.|.....|..|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4789999  89999999999999999999764

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.28  E-value=6.8e-07  Score=49.98  Aligned_cols=29  Identities=28%  Similarity=0.455  Sum_probs=26.4

Q ss_pred             CccccCcccccccChhhhhhhhhhcCCCc
Q 038614          150 NKYKCKTCKKEFRSYQALGGHKASHKKIK  178 (263)
Q Consensus       150 kp~kC~~C~k~F~s~~~L~~H~~~H~~~k  178 (263)
                      +||+|..|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            47999999999999999999999998763

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.02  E-value=1.2e-06  Score=48.56  Aligned_cols=29  Identities=31%  Similarity=0.534  Sum_probs=26.6

Q ss_pred             CccccCcccccccChhhhhhhhhhcCCCc
Q 038614          150 NKYKCKTCKKEFRSYQALGGHKASHKKIK  178 (263)
Q Consensus       150 kp~kC~~C~k~F~s~~~L~~H~~~H~~~k  178 (263)
                      ++|+|..|++.|.....|..|+++|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            57999999999999999999999998764

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.02  E-value=2.1e-06  Score=47.63  Aligned_cols=27  Identities=37%  Similarity=0.716  Sum_probs=25.2

Q ss_pred             cceecC--ccccccCCchhhhhHhhhhcC
Q 038614          200 RVFKCP--FCDKVFDSGQALGGHKKIHFT  226 (263)
Q Consensus       200 kp~~C~--~Cgk~F~~~~~L~~H~r~H~~  226 (263)
                      ++|.|.  .|++.|.....|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            589999  999999999999999999974

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.02  E-value=1.8e-06  Score=47.71  Aligned_cols=28  Identities=25%  Similarity=0.529  Sum_probs=25.7

Q ss_pred             CCccccCcccccccChhhhhhhhhhcCC
Q 038614          149 TNKYKCKTCKKEFRSYQALGGHKASHKK  176 (263)
Q Consensus       149 ~kp~kC~~C~k~F~s~~~L~~H~~~H~~  176 (263)
                      +++|+|..|++.|.....|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4689999999999999999999999874

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.02  E-value=2.1e-06  Score=47.91  Aligned_cols=29  Identities=17%  Similarity=0.385  Sum_probs=26.8

Q ss_pred             CccccCcccccccChhhhhhhhhhcCCCc
Q 038614          150 NKYKCKTCKKEFRSYQALGGHKASHKKIK  178 (263)
Q Consensus       150 kp~kC~~C~k~F~s~~~L~~H~~~H~~~k  178 (263)
                      ++|+|..|++.|.....|..|+++|.+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            47999999999999999999999998765

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.01  E-value=1.6e-06  Score=47.97  Aligned_cols=29  Identities=28%  Similarity=0.447  Sum_probs=26.5

Q ss_pred             CccccCcccccccChhhhhhhhhhcCCCc
Q 038614          150 NKYKCKTCKKEFRSYQALGGHKASHKKIK  178 (263)
Q Consensus       150 kp~kC~~C~k~F~s~~~L~~H~~~H~~~k  178 (263)
                      +||+|..|++.|.....|..|+++|.+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            58999999999999999999999998763

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.00  E-value=1.8e-06  Score=52.19  Aligned_cols=26  Identities=23%  Similarity=0.568  Sum_probs=24.5

Q ss_pred             cCCCCccccCcccccccChhhhhhhh
Q 038614          146 VSRTNKYKCKTCKKEFRSYQALGGHK  171 (263)
Q Consensus       146 h~~~kp~kC~~C~k~F~s~~~L~~H~  171 (263)
                      +.+++||+|.+|+|.|.+.+.|..|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            46899999999999999999999998

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.00  E-value=2.7e-06  Score=48.37  Aligned_cols=29  Identities=31%  Similarity=0.579  Sum_probs=26.5

Q ss_pred             CccccC--cccccccChhhhhhhhhhcCCCc
Q 038614          150 NKYKCK--TCKKEFRSYQALGGHKASHKKIK  178 (263)
Q Consensus       150 kp~kC~--~C~k~F~s~~~L~~H~~~H~~~k  178 (263)
                      +||.|.  .|++.|.....|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            589998  99999999999999999999864

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.25  E-value=7.9e-07  Score=49.88  Aligned_cols=30  Identities=30%  Similarity=0.521  Sum_probs=27.0

Q ss_pred             CCccccCcccccccChhhhhhhhhhcCCCc
Q 038614          149 TNKYKCKTCKKEFRSYQALGGHKASHKKIK  178 (263)
Q Consensus       149 ~kp~kC~~C~k~F~s~~~L~~H~~~H~~~k  178 (263)
                      ++||+|..|++.|.....|..|+++|++++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            368999999999999999999999998753

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.99  E-value=1.8e-06  Score=62.79  Aligned_cols=37  Identities=24%  Similarity=0.538  Sum_probs=32.2

Q ss_pred             ccccccCCcceecCccccccCCchhhhhHhhhhcCCC
Q 038614          192 GDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYL  228 (263)
Q Consensus       192 h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  228 (263)
                      +.++|++++||.|++|++.|.+...|..|+++|+++.
T Consensus        16 ~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ek   52 (88)
T 1x6f_A           16 GNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEF   52 (88)
T ss_dssp             CCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHH
T ss_pred             cccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCC
Confidence            4567888999999999999999999999999998764

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.98  E-value=2.2e-06  Score=47.12  Aligned_cols=27  Identities=22%  Similarity=0.603  Sum_probs=24.9

Q ss_pred             CCccccCcccccccChhhhhhhhhhcC
Q 038614          149 TNKYKCKTCKKEFRSYQALGGHKASHK  175 (263)
Q Consensus       149 ~kp~kC~~C~k~F~s~~~L~~H~~~H~  175 (263)
                      ++||+|..|++.|.....|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            478999999999999999999999885

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.98  E-value=1.8e-06  Score=47.63  Aligned_cols=27  Identities=22%  Similarity=0.581  Sum_probs=24.9

Q ss_pred             CCccccCcccccccChhhhhhhhhhcC
Q 038614          149 TNKYKCKTCKKEFRSYQALGGHKASHK  175 (263)
Q Consensus       149 ~kp~kC~~C~k~F~s~~~L~~H~~~H~  175 (263)
                      ++||+|..|++.|.....|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            468999999999999999999999884

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.97  E-value=3.2e-06  Score=46.18  Aligned_cols=27  Identities=37%  Similarity=0.726  Sum_probs=23.9

Q ss_pred             ccccCcccccccChhhhhhhhhhcCCC
Q 038614          151 KYKCKTCKKEFRSYQALGGHKASHKKI  177 (263)
Q Consensus       151 p~kC~~C~k~F~s~~~L~~H~~~H~~~  177 (263)
                      ||+|..|++.|.....|..|+++|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            589999999999999999999999863

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.97  E-value=3.3e-06  Score=47.26  Aligned_cols=29  Identities=24%  Similarity=0.464  Sum_probs=26.3

Q ss_pred             CccccCcccccccChhhhhhh-hhhcCCCc
Q 038614          150 NKYKCKTCKKEFRSYQALGGH-KASHKKIK  178 (263)
Q Consensus       150 kp~kC~~C~k~F~s~~~L~~H-~~~H~~~k  178 (263)
                      +||.|..|++.|.....|..| +++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            479999999999999999999 89998763

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.03  E-value=2.6e-06  Score=46.36  Aligned_cols=26  Identities=31%  Similarity=0.649  Sum_probs=23.9

Q ss_pred             CccccCcccccccChhhhhhhhhhcC
Q 038614          150 NKYKCKTCKKEFRSYQALGGHKASHK  175 (263)
Q Consensus       150 kp~kC~~C~k~F~s~~~L~~H~~~H~  175 (263)
                      +||+|..|++.|.....|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            58999999999999999999999874

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.80  E-value=3.1e-06  Score=59.49  Aligned_cols=63  Identities=8%  Similarity=-0.034  Sum_probs=54.2

Q ss_pred             cceeeccCCccccCCCCCCCcccccchhhhhcccCCCCccccCcccccccChhhhhhhhhhcCCCc
Q 038614          113 AEAVVDEDEYVRGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKIK  178 (263)
Q Consensus       113 ~~~~~~~~~~~~~c~~c~~~~~~~~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~k  178 (263)
                      .+.....+..++.|..|+..|. ...|..|. .|.++++|.|..|++.|. ...|..|+++|.+++
T Consensus         7 ~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            7 GHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             hhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            3445567788999999999995 77888999 899999999999999988 589999999998764

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.61  E-value=1.9e-05  Score=43.53  Aligned_cols=27  Identities=30%  Similarity=0.625  Sum_probs=24.9

Q ss_pred             CccccC--cccccccChhhhhhhhhhcCC
Q 038614          150 NKYKCK--TCKKEFRSYQALGGHKASHKK  176 (263)
Q Consensus       150 kp~kC~--~C~k~F~s~~~L~~H~~~H~~  176 (263)
                      ++|.|.  .|++.|.....|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            479999  999999999999999999974

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.56  E-value=0.00051  Score=52.87  Aligned_cols=32  Identities=19%  Similarity=0.290  Sum_probs=28.5

Q ss_pred             ccccccCCcceecCccccccCCchhhhhHhhh
Q 038614          192 GDAVVMDQRVFKCPFCDKVFDSGQALGGHKKI  223 (263)
Q Consensus       192 h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~  223 (263)
                      +..-|+|+++|.|..|++.|.+...|..|+|+
T Consensus        41 ~ded~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           41 FDPDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SCSSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            34567899999999999999999999999875

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.90  E-value=0.0019  Score=49.70  Aligned_cols=30  Identities=20%  Similarity=0.286  Sum_probs=27.1

Q ss_pred             ccCCCCccccCcccccccChhhhhhhhhhc
Q 038614          145 LVSRTNKYKCKTCKKEFRSYQALGGHKASH  174 (263)
Q Consensus       145 ~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H  174 (263)
                      .|+|+++|.|..|+|.|.+...|..|+++.
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            378999999999999999999999998754

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.75  E-value=0.0027  Score=49.05  Aligned_cols=73  Identities=19%  Similarity=0.234  Sum_probs=50.4

Q ss_pred             CccccCcccccccChhhhhhhh--hhcCCC-cccccCCC------Cccc--ccccccccCCcceecCccccccCCchhhh
Q 038614          150 NKYKCKTCKKEFRSYQALGGHK--ASHKKI-KIHHNGSS------DAAA--AGGDAVVMDQRVFKCPFCDKVFDSGQALG  218 (263)
Q Consensus       150 kp~kC~~C~k~F~s~~~L~~H~--~~H~~~-kp~~~~~~------~~~~--~~h~~~h~g~kp~~C~~Cgk~F~~~~~L~  218 (263)
                      +++.|.+|+..|.+...+..|.  +.|... +.+.....      ...+  ..+...+.+.+.|-|.+|.+.|.+...|.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~~~  110 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRSKCCPVCNMTFSSPVVAE  110 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCSSCCSSCCCTTTEETTTTEECSSHHHHH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCccccccCCCCCeEcCCCCCEeCCHHHHH
Confidence            5789999999999999999998  456532 22221100      0000  11223455678899999999999999999


Q ss_pred             hHhh
Q 038614          219 GHKK  222 (263)
Q Consensus       219 ~H~r  222 (263)
                      .|..
T Consensus       111 ~H~~  114 (127)
T 1zu1_A          111 SHYI  114 (127)
T ss_dssp             HHHT
T ss_pred             HHHC
Confidence            9974

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=95.64  E-value=0.016  Score=39.09  Aligned_cols=57  Identities=23%  Similarity=0.334  Sum_probs=44.3

Q ss_pred             cccCc--ccccccChhhhhhhh-hhcCCCcccccCCCCcccccccccccCCcceecC--ccccccCCchhhhhHhhhh
Q 038614          152 YKCKT--CKKEFRSYQALGGHK-ASHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCP--FCDKVFDSGQALGGHKKIH  224 (263)
Q Consensus       152 ~kC~~--C~k~F~s~~~L~~H~-~~H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~--~Cgk~F~~~~~L~~H~r~H  224 (263)
                      |.|..  |++.|.+...|..|+ ..|.+.+.-                ....+|.|.  .|++.+.....|..|+|+.
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~----------------~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFK----------------HPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCC----------------CSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccC----------------CCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            45654  999999999999997 578765310                012489997  7999999999999999874

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.41  E-value=0.018  Score=36.31  Aligned_cols=29  Identities=28%  Similarity=0.424  Sum_probs=25.6

Q ss_pred             cceecCccccccCCchhhhhHhhhhcCCC
Q 038614          200 RVFKCPFCDKVFDSGQALGGHKKIHFTYL  228 (263)
Q Consensus       200 kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  228 (263)
                      -+|.|+.|++.|.....|++||+---+..
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycCp~~   39 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCCPEM   39 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHCTTT
T ss_pred             CceeCCcccccccchHHHHhhhhhcCcch
Confidence            68999999999999999999999766553

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=93.62  E-value=0.033  Score=37.41  Aligned_cols=47  Identities=6%  Similarity=0.029  Sum_probs=39.8

Q ss_pred             CCCCCcccccchhhhh-cccCCCC------ccccC--cccccccChhhhhhhhhhc
Q 038614          128 DDGDNDEEEDKEEDES-SLVSRTN------KYKCK--TCKKEFRSYQALGGHKASH  174 (263)
Q Consensus       128 ~c~~~~~~~~~~~~h~-~~h~~~k------p~kC~--~C~k~F~s~~~L~~H~~~H  174 (263)
                      .|++.|.....|..|+ ..|.+.+      +|.|.  .|++.+.....|..|+++.
T Consensus         8 ~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            8 ECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             TCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            6889999999999997 5787655      89997  6999999999999998763

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=91.59  E-value=0.081  Score=33.30  Aligned_cols=26  Identities=31%  Similarity=0.575  Sum_probs=23.1

Q ss_pred             CccccCcccccccChhhhhhhhhhcC
Q 038614          150 NKYKCKTCKKEFRSYQALGGHKASHK  175 (263)
Q Consensus       150 kp~kC~~C~k~F~s~~~L~~H~~~H~  175 (263)
                      .+|.|+.|+..|.....|.+|++---
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycC   36 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCC   36 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHC
T ss_pred             CceeCCcccccccchHHHHhhhhhcC
Confidence            67999999999999999999998443

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=86.71  E-value=0.44  Score=27.86  Aligned_cols=27  Identities=33%  Similarity=0.476  Sum_probs=22.8

Q ss_pred             ceecCccccccCCchhhhhHhh-hhcCC
Q 038614          201 VFKCPFCDKVFDSGQALGGHKK-IHFTY  227 (263)
Q Consensus       201 p~~C~~Cgk~F~~~~~L~~H~r-~H~~~  227 (263)
                      .|.|++|.+.|.+...|..|-. .|..+
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~~   32 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDAG   32 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccccC
Confidence            5999999999999999999965 46543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	263
d1njqa_	37	g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale c	2e-11
d1njqa_	37	g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale c	6e-10

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 55.5 bits (134), Expect = 2e-11
 Identities = 15/28 (53%), Positives = 19/28 (67%)

Query: 151 KYKCKTCKKEFRSYQALGGHKASHKKIK 178
            Y C  CK+EFRS QALGGH   H++ +
Sbjct: 5   SYTCSFCKREFRSAQALGGHMNVHRRDR 32

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 51.3 bits (123), Expect = 6e-10
 Identities = 13/26 (50%), Positives = 16/26 (61%)

Query: 199 QRVFKCPFCDKVFDSGQALGGHKKIH 224
            R + C FC + F S QALGGH  +H
Sbjct: 3   PRSYTCSFCKREFRSAQALGGHMNVH 28

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	263
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.57
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.33
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.28
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.25
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.21
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.18
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.16
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.16
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.09
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.07
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.01
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.99
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.98
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.97
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.97
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.96
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.95
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.88
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.86
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.81
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.81
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.8
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.79
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.79
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.74
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.73
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.67
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.63
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.59
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.58
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.57
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.54
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.48
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.48
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	98.46
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.43
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.43
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.42
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.24
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	98.23
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.16
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.16
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.15
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.09
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.09
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.07
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.04
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.83
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.75
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.7
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.7
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.59
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.54
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.49
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.45
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.44
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.42
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.39
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.39
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.35
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.27
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.18
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.1
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.06
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	96.93
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.82
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.58
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.57
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.48
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.32
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.28
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.28
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.2
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.2
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.13
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	95.84
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	95.73
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.68
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.66
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	95.45
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.42
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.28
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	95.25
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.22
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	94.87
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.62
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.58
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.52
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	94.14
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	93.99
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	93.95
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	93.75
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	92.76
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	92.65
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	92.08
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	91.77
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	90.88
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	90.88
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	90.61
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	88.56
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	87.84
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	86.24
d1y0jb1	36	U-shaped transcription factor, different fingers {	85.9
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	85.57
d1y0jb1	36	U-shaped transcription factor, different fingers {	83.52
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	83.08
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	81.98
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	81.65
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	81.3

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=5e-16  Score=101.91  Aligned_cols=53  Identities=34%  Similarity=0.637  Sum_probs=49.8

Q ss_pred             CCccccCcccccccChhhhhhhhhhcCCCcccccCCCCcccccccccccCCcceecCccccccCCchhhhhHhhhh
Q 038614          149 TNKYKCKTCKKEFRSYQALGGHKASHKKIKIHHNGSSDAAAAGGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIH  224 (263)
Q Consensus       149 ~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~~~~~~~~~~~~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H  224 (263)
                      +|||+|+ ||+.|....+|..|+++|+                      |++||.|.+||+.|.+...|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht----------------------~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHL----------------------GLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHS----------------------CCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccc----------------------cccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            5899995 9999999999999999998                      568999999999999999999999998

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=2.5e-13  Score=82.40  Aligned_cols=37  Identities=24%  Similarity=0.464  Sum_probs=35.3

Q ss_pred             cccccccCCcceecCccccccCCchhhhhHhhhhcCC
Q 038614          191 GGDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      +|+++|+++|||.|++|||+|.+.+.|..|+|+|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            5888999999999999999999999999999999986

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=6.8e-13  Score=77.58  Aligned_cols=33  Identities=21%  Similarity=0.478  Sum_probs=31.6

Q ss_pred             cccCCcceecCccccccCCchhhhhHhhhhcCC
Q 038614          195 VVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       195 ~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      +|+|+|||+|.+||++|.+.+.|..|+|+|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            588999999999999999999999999999986

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=4.9e-13  Score=87.26  Aligned_cols=53  Identities=21%  Similarity=0.349  Sum_probs=50.3

Q ss_pred             CccccCCCCCCCcccccchhhhhcccCCCCccccCcccccccChhhhhhhhhhc
Q 038614          121 EYVRGKSDDGDNDEEEDKEEDESSLVSRTNKYKCKTCKKEFRSYQALGGHKASH  174 (263)
Q Consensus       121 ~~~~~c~~c~~~~~~~~~~~~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H  174 (263)
                      +.+|.| +||+.|.....|..|+++|++++||+|.+||+.|.+...|..|+++|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            357899 59999999999999999999999999999999999999999999987

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.21  E-value=2.9e-12  Score=77.12  Aligned_cols=35  Identities=29%  Similarity=0.560  Sum_probs=33.3

Q ss_pred             ccccccCCcceecCccccccCCchhhhhHhhhhcC
Q 038614          192 GDAVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFT  226 (263)
Q Consensus       192 h~~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~  226 (263)
                      |.|+|+|+|||+|.+|+++|.+.+.|..|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            77899999999999999999999999999999975

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=4.9e-12  Score=75.61  Aligned_cols=34  Identities=26%  Similarity=0.407  Sum_probs=32.2

Q ss_pred             ccccCCcceecCccccccCCchhhhhHhhhhcCC
Q 038614          194 AVVMDQRVFKCPFCDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       194 ~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      |+|+|+|||+|.+||++|.+.+.|..|+++|.++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            5799999999999999999999999999999875

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.16  E-value=7.8e-12  Score=73.96  Aligned_cols=33  Identities=27%  Similarity=0.483  Sum_probs=31.0

Q ss_pred             ccCCcceecCccccccCCchhhhhHhhhhcCCC
Q 038614          196 VMDQRVFKCPFCDKVFDSGQALGGHKKIHFTYL  228 (263)
Q Consensus       196 h~g~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  228 (263)
                      |+|+|||+|.+|+|.|.+...|..|+|+|++..
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~~   34 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCcC
Confidence            689999999999999999999999999999753

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=5.2e-12  Score=76.45  Aligned_cols=37  Identities=24%  Similarity=0.480  Sum_probs=35.5

Q ss_pred             hhhcccCCCCccccCcccccccChhhhhhhhhhcCCC
Q 038614          141 DESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKI  177 (263)
Q Consensus       141 ~h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~  177 (263)
                      .|+++|++++||+|.+|||+|.+.++|..|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            5889999999999999999999999999999999986

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=1.5e-11  Score=71.79  Aligned_cols=33  Identities=27%  Similarity=0.446  Sum_probs=31.7

Q ss_pred             ccCCCCccccCcccccccChhhhhhhhhhcCCC
Q 038614          145 LVSRTNKYKCKTCKKEFRSYQALGGHKASHKKI  177 (263)
Q Consensus       145 ~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~  177 (263)
                      +|++++||+|.+|||.|.+.+.|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            589999999999999999999999999999986

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.07  E-value=2.1e-11  Score=68.32  Aligned_cols=28  Identities=29%  Similarity=0.608  Sum_probs=27.0

Q ss_pred             CcceecCccccccCCchhhhhHhhhhcC
Q 038614          199 QRVFKCPFCDKVFDSGQALGGHKKIHFT  226 (263)
Q Consensus       199 ~kp~~C~~Cgk~F~~~~~L~~H~r~H~~  226 (263)
                      +|||+|++|+|.|.+...|..|+|+|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6899999999999999999999999986

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=7.9e-11  Score=70.15  Aligned_cols=33  Identities=15%  Similarity=0.334  Sum_probs=29.4

Q ss_pred             ccccCCcceecCccccccCCchhhhhHhhh-hcC
Q 038614          194 AVVMDQRVFKCPFCDKVFDSGQALGGHKKI-HFT  226 (263)
Q Consensus       194 ~~h~g~kp~~C~~Cgk~F~~~~~L~~H~r~-H~~  226 (263)
                      |+|+|+|||+|++|++.|.+...|..|++. |+.
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            579999999999999999999999999765 544

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.99  E-value=7.8e-11  Score=66.69  Aligned_cols=28  Identities=29%  Similarity=0.585  Sum_probs=27.1

Q ss_pred             cceecCccccccCCchhhhhHhhhhcCC
Q 038614          200 RVFKCPFCDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       200 kp~~C~~Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      |||.|++|++.|.+.+.|..|+|+|+|+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSS
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCC
Confidence            6999999999999999999999999997

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.98  E-value=1e-10  Score=70.11  Aligned_cols=35  Identities=17%  Similarity=0.421  Sum_probs=33.2

Q ss_pred             hhcccCCCCccccCcccccccChhhhhhhhhhcCC
Q 038614          142 ESSLVSRTNKYKCKTCKKEFRSYQALGGHKASHKK  176 (263)
Q Consensus       142 h~~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~  176 (263)
                      |.++|++++||+|.+|++.|.+...|..|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            67899999999999999999999999999999975

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.97  E-value=1.1e-10  Score=70.69  Aligned_cols=36  Identities=28%  Similarity=0.506  Sum_probs=31.1

Q ss_pred             CCCccccCcccccccChhhhhhhhh-hcCCCcccccC
Q 038614          148 RTNKYKCKTCKKEFRSYQALGGHKA-SHKKIKIHHNG  183 (263)
Q Consensus       148 ~~kp~kC~~C~k~F~s~~~L~~H~~-~H~~~kp~~~~  183 (263)
                      .+|||+|..|||.|.+..+|..|++ +|+++|||.|.
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            5789999999999999999999975 79987776653

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.97  E-value=9.6e-11  Score=69.83  Aligned_cols=34  Identities=26%  Similarity=0.405  Sum_probs=32.2

Q ss_pred             cccCCCCccccCcccccccChhhhhhhhhhcCCC
Q 038614          144 SLVSRTNKYKCKTCKKEFRSYQALGGHKASHKKI  177 (263)
Q Consensus       144 ~~h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~  177 (263)
                      ++|++++||+|.+|+|.|.+...|..|+++|.++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            5799999999999999999999999999999875

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=1.3e-10  Score=65.61  Aligned_cols=28  Identities=36%  Similarity=0.604  Sum_probs=27.1

Q ss_pred             cceecCccccccCCchhhhhHhhhhcCC
Q 038614          200 RVFKCPFCDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       200 kp~~C~~Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      |||.|++|||.|.+.+.|..|+|+|+|+
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCc
Confidence            6999999999999999999999999986

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=1e-10  Score=63.98  Aligned_cols=26  Identities=35%  Similarity=0.719  Sum_probs=25.1

Q ss_pred             cceecCccccccCCchhhhhHhhhhc
Q 038614          200 RVFKCPFCDKVFDSGQALGGHKKIHF  225 (263)
Q Consensus       200 kp~~C~~Cgk~F~~~~~L~~H~r~H~  225 (263)
                      |||+|.+|||+|.+.+.|..|+|+|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            79999999999999999999999996

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.88  E-value=3.1e-10  Score=66.90  Aligned_cols=32  Identities=19%  Similarity=0.404  Sum_probs=30.4

Q ss_pred             cCCCCccccCcccccccChhhhhhhhhhcCCC
Q 038614          146 VSRTNKYKCKTCKKEFRSYQALGGHKASHKKI  177 (263)
Q Consensus       146 h~~~kp~kC~~C~k~F~s~~~L~~H~~~H~~~  177 (263)
                      |+|++||+|.+|+|.|.+..+|..|+++|+..
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            68999999999999999999999999999864

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.86  E-value=4.2e-10  Score=63.60  Aligned_cols=29  Identities=28%  Similarity=0.587  Sum_probs=27.7

Q ss_pred             CccccCcccccccChhhhhhhhhhcCCCc
Q 038614          150 NKYKCKTCKKEFRSYQALGGHKASHKKIK  178 (263)
Q Consensus       150 kp~kC~~C~k~F~s~~~L~~H~~~H~~~k  178 (263)
                      +||+|.+|+|.|.+...|..|+++|+|+|
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            68999999999999999999999999985

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=7e-10  Score=62.56  Aligned_cols=29  Identities=31%  Similarity=0.632  Sum_probs=27.7

Q ss_pred             CccccCcccccccChhhhhhhhhhcCCCc
Q 038614          150 NKYKCKTCKKEFRSYQALGGHKASHKKIK  178 (263)
Q Consensus       150 kp~kC~~C~k~F~s~~~L~~H~~~H~~~k  178 (263)
                      |||.|.+|+|.|.+.+.|..|+++|+|+|
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            68999999999999999999999999985

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.81  E-value=4.1e-10  Score=62.99  Aligned_cols=28  Identities=21%  Similarity=0.602  Sum_probs=26.8

Q ss_pred             CCccccCcccccccChhhhhhhhhhcCC
Q 038614          149 TNKYKCKTCKKEFRSYQALGGHKASHKK  176 (263)
Q Consensus       149 ~kp~kC~~C~k~F~s~~~L~~H~~~H~~  176 (263)
                      ||||+|.+|+|.|.+...|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6899999999999999999999999986

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=9.8e-10  Score=62.38  Aligned_cols=28  Identities=29%  Similarity=0.536  Sum_probs=26.8

Q ss_pred             cceecCc--cccccCCchhhhhHhhhhcCC
Q 038614          200 RVFKCPF--CDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       200 kp~~C~~--Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      |||.|++  |+|+|.+.+.|..|+|+|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            6999998  999999999999999999986

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.79  E-value=9.8e-10  Score=69.20  Aligned_cols=36  Identities=25%  Similarity=0.474  Sum_probs=32.5

Q ss_pred             cccccccCCcceecCc--cccccCCchhhhhHhhhhcCC
Q 038614          191 GGDAVVMDQRVFKCPF--CDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       191 ~h~~~h~g~kp~~C~~--Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      .|+ .|+|+|||.|.+  |+++|...++|..|+++|+|+
T Consensus         9 ~h~-~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htge   46 (47)
T d1ncsa_           9 KYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             GSC-EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             chh-hccCCCCeECCcCCCCccccCchHHHhhcccccCC
Confidence            344 488999999987  999999999999999999986

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=9.7e-10  Score=62.48  Aligned_cols=28  Identities=36%  Similarity=0.669  Sum_probs=26.6

Q ss_pred             cceecCc--cccccCCchhhhhHhhhhcCC
Q 038614          200 RVFKCPF--CDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       200 kp~~C~~--Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      |||.|++  |+|+|.+.++|..|+|+|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6999987  999999999999999999986

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=1.6e-09  Score=64.32  Aligned_cols=33  Identities=21%  Similarity=0.412  Sum_probs=29.3

Q ss_pred             cccCCCCccccCcccccccChhhhhhhhh-hcCC
Q 038614          144 SLVSRTNKYKCKTCKKEFRSYQALGGHKA-SHKK  176 (263)
Q Consensus       144 ~~h~~~kp~kC~~C~k~F~s~~~L~~H~~-~H~~  176 (263)
                      ++|+|++||+|..|++.|.+..+|..|++ .|++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            57999999999999999999999999975 4543

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.73  E-value=1.1e-09  Score=68.91  Aligned_cols=40  Identities=15%  Similarity=0.326  Sum_probs=35.4

Q ss_pred             chhhhhcccCCCCccccCc--ccccccChhhhhhhhhhcCCCc
Q 038614          138 KEEDESSLVSRTNKYKCKT--CKKEFRSYQALGGHKASHKKIK  178 (263)
Q Consensus       138 ~~~~h~~~h~~~kp~kC~~--C~k~F~s~~~L~~H~~~H~~~k  178 (263)
                      .+..|+. |++++||+|.+  |+|.|....+|..|+++|+|+|
T Consensus         6 ~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           6 SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            3456665 99999999987  9999999999999999999985

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=1.7e-09  Score=59.03  Aligned_cols=26  Identities=35%  Similarity=0.660  Sum_probs=24.9

Q ss_pred             CccccCcccccccChhhhhhhhhhcC
Q 038614          150 NKYKCKTCKKEFRSYQALGGHKASHK  175 (263)
Q Consensus       150 kp~kC~~C~k~F~s~~~L~~H~~~H~  175 (263)
                      |||+|.+|||+|.+.+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            69999999999999999999999985

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=7.4e-09  Score=62.35  Aligned_cols=34  Identities=26%  Similarity=0.460  Sum_probs=30.2

Q ss_pred             CCcceecCccccccCCchhhhhHhh-hhcCCCCCC
Q 038614          198 DQRVFKCPFCDKVFDSGQALGGHKK-IHFTYLATP  231 (263)
Q Consensus       198 g~kp~~C~~Cgk~F~~~~~L~~H~r-~H~~~~~~~  231 (263)
                      -+|||+|.+|||.|.+..+|..|++ +|+++.+..
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~   36 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHK   36 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCC
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcC
Confidence            3799999999999999999999976 799987643

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.59  E-value=9.2e-09  Score=58.78  Aligned_cols=28  Identities=36%  Similarity=0.707  Sum_probs=26.2

Q ss_pred             cceecC--ccccccCCchhhhhHhhhhcCC
Q 038614          200 RVFKCP--FCDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       200 kp~~C~--~Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      |||.|+  .|+|+|...++|..|+|+|+|+
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~Htge   30 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCccccc
Confidence            699996  5999999999999999999987

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.58  E-value=8.2e-09  Score=57.98  Aligned_cols=27  Identities=37%  Similarity=0.816  Sum_probs=25.7

Q ss_pred             cceecCc--cccccCCchhhhhHhhhhcC
Q 038614          200 RVFKCPF--CDKVFDSGQALGGHKKIHFT  226 (263)
Q Consensus       200 kp~~C~~--Cgk~F~~~~~L~~H~r~H~~  226 (263)
                      |||.|++  |+|+|.+...|..|+|+|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6999988  99999999999999999986

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.57  E-value=6.7e-09  Score=61.46  Aligned_cols=33  Identities=21%  Similarity=0.327  Sum_probs=29.3

Q ss_pred             cccCc--ccccccChhhhhhhhhhcCCCcccccCC
Q 038614          152 YKCKT--CKKEFRSYQALGGHKASHKKIKIHHNGS  184 (263)
Q Consensus       152 ~kC~~--C~k~F~s~~~L~~H~~~H~~~kp~~~~~  184 (263)
                      |.|..  |+|.|.....|.+|+++|+|++||.|.|
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            78876  9999999999999999999888887654

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.54  E-value=2.2e-08  Score=57.47  Aligned_cols=29  Identities=38%  Similarity=0.629  Sum_probs=27.1

Q ss_pred             CcceecCc--cccccCCchhhhhHhhhhcCC
Q 038614          199 QRVFKCPF--CDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       199 ~kp~~C~~--Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      +|||.|++  |+|+|....+|.+|+++|+..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            58999988  999999999999999999864

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=2.3e-08  Score=56.52  Aligned_cols=28  Identities=29%  Similarity=0.523  Sum_probs=26.5

Q ss_pred             CccccCc--ccccccChhhhhhhhhhcCCC
Q 038614          150 NKYKCKT--CKKEFRSYQALGGHKASHKKI  177 (263)
Q Consensus       150 kp~kC~~--C~k~F~s~~~L~~H~~~H~~~  177 (263)
                      |||+|.+  |+|.|....+|..|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            6899998  999999999999999999985

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=2.5e-08  Score=55.39  Aligned_cols=26  Identities=38%  Similarity=0.805  Sum_probs=24.8

Q ss_pred             cceecCc--cccccCCchhhhhHhhhhc
Q 038614          200 RVFKCPF--CDKVFDSGQALGGHKKIHF  225 (263)
Q Consensus       200 kp~~C~~--Cgk~F~~~~~L~~H~r~H~  225 (263)
                      |||.|++  |||+|....+|.+|+|+|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6999988  9999999999999999996

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.46  E-value=4.1e-08  Score=57.53  Aligned_cols=31  Identities=45%  Similarity=0.866  Sum_probs=27.8

Q ss_pred             CcceecCccccccCCchhhhhHhhhhcCCCC
Q 038614          199 QRVFKCPFCDKVFDSGQALGGHKKIHFTYLA  229 (263)
Q Consensus       199 ~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~  229 (263)
                      .+.|+|.+|++.|.++++|++|++.|..+.+
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r~   33 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDRA   33 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchHH
Confidence            4689999999999999999999999987643

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=2.2e-08  Score=56.72  Aligned_cols=28  Identities=25%  Similarity=0.408  Sum_probs=26.3

Q ss_pred             CccccCc--ccccccChhhhhhhhhhcCCC
Q 038614          150 NKYKCKT--CKKEFRSYQALGGHKASHKKI  177 (263)
Q Consensus       150 kp~kC~~--C~k~F~s~~~L~~H~~~H~~~  177 (263)
                      |||+|.+  |+|.|....+|..|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6899987  999999999999999999985

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=4.3e-08  Score=55.90  Aligned_cols=29  Identities=31%  Similarity=0.579  Sum_probs=26.8

Q ss_pred             CccccC--cccccccChhhhhhhhhhcCCCc
Q 038614          150 NKYKCK--TCKKEFRSYQALGGHKASHKKIK  178 (263)
Q Consensus       150 kp~kC~--~C~k~F~s~~~L~~H~~~H~~~k  178 (263)
                      +||+|.  .|+|.|....+|..|+++|+|+|
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            689996  59999999999999999999985

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=4.4e-08  Score=51.10  Aligned_cols=26  Identities=31%  Similarity=0.572  Sum_probs=24.9

Q ss_pred             ceecCccccccCCchhhhhHhhhhcC
Q 038614          201 VFKCPFCDKVFDSGQALGGHKKIHFT  226 (263)
Q Consensus       201 p~~C~~Cgk~F~~~~~L~~H~r~H~~  226 (263)
                      |++|+.|+|.|+.+..|..|+|.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            68999999999999999999999986

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.24  E-value=2.7e-07  Score=49.60  Aligned_cols=27  Identities=30%  Similarity=0.721  Sum_probs=25.7

Q ss_pred             CcceecCccccccCCchhhhhHhhhhc
Q 038614          199 QRVFKCPFCDKVFDSGQALGGHKKIHF  225 (263)
Q Consensus       199 ~kp~~C~~Cgk~F~~~~~L~~H~r~H~  225 (263)
                      +|||.|.+||+.|.......+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            589999999999999999999999995

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.23  E-value=2e-07  Score=54.58  Aligned_cols=30  Identities=50%  Similarity=0.959  Sum_probs=27.2

Q ss_pred             CCccccCcccccccChhhhhhhhhhcCCCc
Q 038614          149 TNKYKCKTCKKEFRSYQALGGHKASHKKIK  178 (263)
Q Consensus       149 ~kp~kC~~C~k~F~s~~~L~~H~~~H~~~k  178 (263)
                      .+.|+|.+|++.|.+.++|++|++.|..++
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchH
Confidence            356999999999999999999999998765

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.16  E-value=4.5e-07  Score=51.85  Aligned_cols=29  Identities=34%  Similarity=0.631  Sum_probs=26.7

Q ss_pred             CCccccCc--ccccccChhhhhhhhhhcCCC
Q 038614          149 TNKYKCKT--CKKEFRSYQALGGHKASHKKI  177 (263)
Q Consensus       149 ~kp~kC~~--C~k~F~s~~~L~~H~~~H~~~  177 (263)
                      ++||.|.+  |+|.|....+|..|+++|+..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            58999988  999999999999999999863

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.16  E-value=2e-07  Score=52.15  Aligned_cols=27  Identities=26%  Similarity=0.565  Sum_probs=25.3

Q ss_pred             CccccCc--ccccccChhhhhhhhhhcCC
Q 038614          150 NKYKCKT--CKKEFRSYQALGGHKASHKK  176 (263)
Q Consensus       150 kp~kC~~--C~k~F~s~~~L~~H~~~H~~  176 (263)
                      |||+|.+  |+|.|....+|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6899987  99999999999999999986

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.15  E-value=4.5e-07  Score=47.20  Aligned_cols=26  Identities=31%  Similarity=0.508  Sum_probs=24.6

Q ss_pred             ccccCcccccccChhhhhhhhhhcCC
Q 038614          151 KYKCKTCKKEFRSYQALGGHKASHKK  176 (263)
Q Consensus       151 p~kC~~C~k~F~s~~~L~~H~~~H~~  176 (263)
                      |++|++|+|.|+.+..|..|+++|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            68999999999999999999999986

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.09  E-value=5.9e-07  Score=50.14  Aligned_cols=32  Identities=34%  Similarity=0.485  Sum_probs=29.2

Q ss_pred             CCccccCcccccccChhhhhhhhhhcCCCccc
Q 038614          149 TNKYKCKTCKKEFRSYQALGGHKASHKKIKIH  180 (263)
Q Consensus       149 ~kp~kC~~C~k~F~s~~~L~~H~~~H~~~kp~  180 (263)
                      ++...|+.|||.|.....|.+|+-+|+++|||
T Consensus         3 rk~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           3 RKQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             chhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            35578999999999999999999999999987

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.09  E-value=7.4e-07  Score=48.62  Aligned_cols=30  Identities=20%  Similarity=0.509  Sum_probs=28.0

Q ss_pred             CcceecCccccccCCchhhhhHhhhhcCCC
Q 038614          199 QRVFKCPFCDKVFDSGQALGGHKKIHFTYL  228 (263)
Q Consensus       199 ~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~  228 (263)
                      +|||.|++|+..|..+..+..|.|.|-|+.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~v   30 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGSV   30 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCcc
Confidence            589999999999999999999999998863

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.07  E-value=5.5e-07  Score=49.77  Aligned_cols=26  Identities=31%  Similarity=0.625  Sum_probs=24.4

Q ss_pred             CccccCc--ccccccChhhhhhhhhhcC
Q 038614          150 NKYKCKT--CKKEFRSYQALGGHKASHK  175 (263)
Q Consensus       150 kp~kC~~--C~k~F~s~~~L~~H~~~H~  175 (263)
                      +||.|..  |+|.|....+|..|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6899987  9999999999999999986

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=8.9e-07  Score=52.04  Aligned_cols=30  Identities=33%  Similarity=0.564  Sum_probs=26.9

Q ss_pred             ceecCc--cccccCCchhhhhHhhhhcCCCCC
Q 038614          201 VFKCPF--CDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       201 p~~C~~--Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      .|.|+.  |+++|.....|.+|+++|+|+.+.
T Consensus         1 tf~C~~~~C~k~F~~~~~L~~H~r~Htgekpy   32 (36)
T d2dlka2           1 SFSCPEPACGKSFNFKKHLKEHMKLHSDTRDY   32 (36)
T ss_dssp             CEECSCTTTCCEESSHHHHHHHHHHHHTSCCC
T ss_pred             CeECCCCCCCCeeCChhHhccccCeeCCCCCE
Confidence            378887  999999999999999999998764

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=4.9e-06  Score=44.07  Aligned_cols=27  Identities=30%  Similarity=0.486  Sum_probs=25.2

Q ss_pred             ceecCccccccCCchhhhhHhhhhcCC
Q 038614          201 VFKCPFCDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       201 p~~C~~Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      -+.|.+|||.|...+.|.+|+-+|+|+
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            478999999999999999999999985

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.75  E-value=7.6e-06  Score=43.53  Aligned_cols=29  Identities=28%  Similarity=0.442  Sum_probs=27.1

Q ss_pred             CcceecCccccccCCchhhhhHhhhhcCC
Q 038614          199 QRVFKCPFCDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       199 ~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      ++||+|..|.+.-...+.|..|.|.|+|.
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            58999999999999999999999999973

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.70  E-value=7.4e-06  Score=43.87  Aligned_cols=27  Identities=19%  Similarity=0.485  Sum_probs=25.2

Q ss_pred             CCccccCcccccccChhhhhhhhhhcC
Q 038614          149 TNKYKCKTCKKEFRSYQALGGHKASHK  175 (263)
Q Consensus       149 ~kp~kC~~C~k~F~s~~~L~~H~~~H~  175 (263)
                      ++||.|.+||+.|.......+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            589999999999999999999999985

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.70  E-value=9.5e-06  Score=42.82  Aligned_cols=27  Identities=30%  Similarity=0.603  Sum_probs=25.5

Q ss_pred             cceecCccccccCCchhhhhHhhhhcC
Q 038614          200 RVFKCPFCDKVFDSGQALGGHKKIHFT  226 (263)
Q Consensus       200 kp~~C~~Cgk~F~~~~~L~~H~r~H~~  226 (263)
                      |||+|..|.+.-...+.|..|+|+|..
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs~   28 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHSD   28 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSCC
T ss_pred             CCcccccccchhcchhhHhhhhhcccC
Confidence            799999999999999999999999963

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.59  E-value=1.8e-05  Score=44.01  Aligned_cols=31  Identities=26%  Similarity=0.395  Sum_probs=28.1

Q ss_pred             cceecCccccccCCchhhhhHhhhhcCCCCC
Q 038614          200 RVFKCPFCDKVFDSGQALGGHKKIHFTYLAT  230 (263)
Q Consensus       200 kp~~C~~Cgk~F~~~~~L~~H~r~H~~~~~~  230 (263)
                      |.+.|..|||.|..-.+|.+|+-.|+++.+.
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            5678999999999999999999999998653

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.54  E-value=2.2e-05  Score=40.30  Aligned_cols=25  Identities=32%  Similarity=0.824  Sum_probs=23.3

Q ss_pred             eecCccccccCCchhhhhHhhhhcC
Q 038614          202 FKCPFCDKVFDSGQALGGHKKIHFT  226 (263)
Q Consensus       202 ~~C~~Cgk~F~~~~~L~~H~r~H~~  226 (263)
                      |+|..|.++|..+++|.+|+|+|.+
T Consensus         1 ykcglcersfveksalsrhqrvhkn   25 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHKN   25 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhcc
Confidence            7899999999999999999999963

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.49  E-value=2.6e-05  Score=40.03  Aligned_cols=24  Identities=42%  Similarity=0.832  Sum_probs=22.9

Q ss_pred             cccCcccccccChhhhhhhhhhcC
Q 038614          152 YKCKTCKKEFRSYQALGGHKASHK  175 (263)
Q Consensus       152 ~kC~~C~k~F~s~~~L~~H~~~H~  175 (263)
                      |+|..|.+.|..+++|.+|+++|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            799999999999999999999996

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.45  E-value=3.7e-05  Score=40.99  Aligned_cols=26  Identities=19%  Similarity=0.313  Sum_probs=24.9

Q ss_pred             eecCccccccCCchhhhhHhhhhcCC
Q 038614          202 FKCPFCDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       202 ~~C~~Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      |.|+.||......+.|..|+|.|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            78999999999999999999999986

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.44  E-value=2.7e-05  Score=41.35  Aligned_cols=29  Identities=28%  Similarity=0.418  Sum_probs=26.6

Q ss_pred             CCccccCcccccccChhhhhhhhhhcCCC
Q 038614          149 TNKYKCKTCKKEFRSYQALGGHKASHKKI  177 (263)
Q Consensus       149 ~kp~kC~~C~k~F~s~~~L~~H~~~H~~~  177 (263)
                      ++||+|..|...-+..+.|..|.+.|+|.
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            57999999999999999999999999973

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.42  E-value=2.3e-05  Score=42.53  Aligned_cols=29  Identities=24%  Similarity=0.507  Sum_probs=27.1

Q ss_pred             CCccccCcccccccChhhhhhhhhhcCCC
Q 038614          149 TNKYKCKTCKKEFRSYQALGGHKASHKKI  177 (263)
Q Consensus       149 ~kp~kC~~C~k~F~s~~~L~~H~~~H~~~  177 (263)
                      ++||.|.+|+..|..+..+..|.++|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            58999999999999999999999999874

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.39  E-value=3.1e-05  Score=40.34  Aligned_cols=26  Identities=38%  Similarity=0.558  Sum_probs=24.4

Q ss_pred             ccCcccccccChhhhhhhhhhcCCCc
Q 038614          153 KCKTCKKEFRSYQALGGHKASHKKIK  178 (263)
Q Consensus       153 kC~~C~k~F~s~~~L~~H~~~H~~~k  178 (263)
                      +|..|.|.|.++..|+.|.+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            69999999999999999999999875

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=3.6e-05  Score=40.64  Aligned_cols=26  Identities=27%  Similarity=0.428  Sum_probs=23.4

Q ss_pred             cccCcccccccChhhhhhhhhhcCCC
Q 038614          152 YKCKTCKKEFRSYQALGGHKASHKKI  177 (263)
Q Consensus       152 ~kC~~C~k~F~s~~~L~~H~~~H~~~  177 (263)
                      +.|..|||.|...+.|++|+-+|+|+
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            57999999999999999999999875

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.35  E-value=5e-05  Score=39.53  Aligned_cols=25  Identities=36%  Similarity=0.517  Sum_probs=24.1

Q ss_pred             ecCccccccCCchhhhhHhhhhcCC
Q 038614          203 KCPFCDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       203 ~C~~Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      +|+.|.|.|.++.-|..|-|.|+|+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            6999999999999999999999987

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.27  E-value=6.9e-05  Score=40.94  Aligned_cols=28  Identities=21%  Similarity=0.565  Sum_probs=25.3

Q ss_pred             cceecCc--cccccCCchhhhhHh-hhhcCC
Q 038614          200 RVFKCPF--CDKVFDSGQALGGHK-KIHFTY  227 (263)
Q Consensus       200 kp~~C~~--Cgk~F~~~~~L~~H~-r~H~~~  227 (263)
                      |||.|.+  |.|.|...+....|+ |+|..+
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            6899987  999999999999997 999764

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.18  E-value=9e-05  Score=43.39  Aligned_cols=26  Identities=19%  Similarity=0.443  Sum_probs=23.7

Q ss_pred             cCCcceecCccccccCCchhhhhHhh
Q 038614          197 MDQRVFKCPFCDKVFDSGQALGGHKK  222 (263)
Q Consensus       197 ~g~kp~~C~~Cgk~F~~~~~L~~H~r  222 (263)
                      +|-|||+|.+|+|.|-+...+.+|.-
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            47899999999999999999999964

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.10  E-value=0.00013  Score=38.73  Aligned_cols=26  Identities=38%  Similarity=0.784  Sum_probs=23.6

Q ss_pred             cceecCc--cccccCCchhhhhHhhhhc
Q 038614          200 RVFKCPF--CDKVFDSGQALGGHKKIHF  225 (263)
Q Consensus       200 kp~~C~~--Cgk~F~~~~~L~~H~r~H~  225 (263)
                      .||+|+.  |++.|...+.|.+|.++|.
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvha   29 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVHA   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhccC
Confidence            4899986  9999999999999999983

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.06  E-value=0.00015  Score=39.17  Aligned_cols=27  Identities=22%  Similarity=0.504  Sum_probs=24.1

Q ss_pred             cceecCc--cccccCCchhhhhHhhhhcC
Q 038614          200 RVFKCPF--CDKVFDSGQALGGHKKIHFT  226 (263)
Q Consensus       200 kp~~C~~--Cgk~F~~~~~L~~H~r~H~~  226 (263)
                      |||.|.+  |+|++...+.|+.|++.+.|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            6899987  99999999999999997654

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.93  E-value=0.00021  Score=37.99  Aligned_cols=28  Identities=25%  Similarity=0.549  Sum_probs=25.7

Q ss_pred             ccccCcccccccChhhhhhhhhhcCCCc
Q 038614          151 KYKCKTCKKEFRSYQALGGHKASHKKIK  178 (263)
Q Consensus       151 p~kC~~C~k~F~s~~~L~~H~~~H~~~k  178 (263)
                      .|.|..||......+.|..|.++|++++
T Consensus         1 kYvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           1 KYICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             CccccccCcccCCHHHHHHHHHHhcCCC
Confidence            3889999999999999999999999874

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.82  E-value=0.00035  Score=37.24  Aligned_cols=28  Identities=32%  Similarity=0.464  Sum_probs=25.5

Q ss_pred             cceecCc--cccccCCchhhhhHhhhhcCC
Q 038614          200 RVFKCPF--CDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       200 kp~~C~~--Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      |||.|.+  |.|.|.+-..|.+|.-+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            5889976  999999999999999999985

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.58  E-value=0.0006  Score=35.84  Aligned_cols=26  Identities=38%  Similarity=0.482  Sum_probs=23.8

Q ss_pred             ceecCccccccCCchhhhhHhhhhcC
Q 038614          201 VFKCPFCDKVFDSGQALGGHKKIHFT  226 (263)
Q Consensus       201 p~~C~~Cgk~F~~~~~L~~H~r~H~~  226 (263)
                      |-+|+.|.++..++.+|+.|.|+|-.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc~   27 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHCT   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGCC
T ss_pred             CccCcccccccCcHHHHHHhhccccC
Confidence            66899999999999999999999953

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.57  E-value=0.00079  Score=35.72  Aligned_cols=29  Identities=28%  Similarity=0.501  Sum_probs=26.8

Q ss_pred             CcceecCccccccCCchhhhhHhhhhcCC
Q 038614          199 QRVFKCPFCDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       199 ~kp~~C~~Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      +..|.|..|...|.....|+.|+-.|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            46799999999999999999999999985

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.48  E-value=0.00054  Score=35.92  Aligned_cols=26  Identities=35%  Similarity=0.593  Sum_probs=24.4

Q ss_pred             CccccCcccccccChhhhhhhhhhcC
Q 038614          150 NKYKCKTCKKEFRSYQALGGHKASHK  175 (263)
Q Consensus       150 kp~kC~~C~k~F~s~~~L~~H~~~H~  175 (263)
                      +||+|..|...-...+.|..|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            79999999999999999999999986

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.32  E-value=0.00085  Score=35.61  Aligned_cols=23  Identities=26%  Similarity=0.644  Sum_probs=21.8

Q ss_pred             ceecCccccccCCchhhhhHhhh
Q 038614          201 VFKCPFCDKVFDSGQALGGHKKI  223 (263)
Q Consensus       201 p~~C~~Cgk~F~~~~~L~~H~r~  223 (263)
                      ||.|..|...|.++.+|..||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            79999999999999999999975

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.28  E-value=0.0012  Score=37.89  Aligned_cols=28  Identities=36%  Similarity=0.650  Sum_probs=25.5

Q ss_pred             CCcceec--CccccccCCchhhhhHhhhhc
Q 038614          198 DQRVFKC--PFCDKVFDSGQALGGHKKIHF  225 (263)
Q Consensus       198 g~kp~~C--~~Cgk~F~~~~~L~~H~r~H~  225 (263)
                      .+|||.|  +-|+.+|.+...|..|+..|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            4799999  569999999999999999986

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.28  E-value=0.00067  Score=35.93  Aligned_cols=25  Identities=32%  Similarity=0.620  Sum_probs=22.5

Q ss_pred             CccccCc--ccccccChhhhhhhhhhc
Q 038614          150 NKYKCKT--CKKEFRSYQALGGHKASH  174 (263)
Q Consensus       150 kp~kC~~--C~k~F~s~~~L~~H~~~H  174 (263)
                      .||+|..  |+|.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4899974  999999999999999887

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.20  E-value=0.00066  Score=36.12  Aligned_cols=28  Identities=32%  Similarity=0.648  Sum_probs=24.6

Q ss_pred             CccccCc--ccccccChhhhhhhhhhcCCC
Q 038614          150 NKYKCKT--CKKEFRSYQALGGHKASHKKI  177 (263)
Q Consensus       150 kp~kC~~--C~k~F~s~~~L~~H~~~H~~~  177 (263)
                      +||.|..  |.|.|.+...|.+|.-+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            5788864  999999999999999999875

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.20  E-value=0.00087  Score=39.09  Aligned_cols=27  Identities=26%  Similarity=0.549  Sum_probs=23.8

Q ss_pred             CCCCccccCcccccccChhhhhhhhhh
Q 038614          147 SRTNKYKCKTCKKEFRSYQALGGHKAS  173 (263)
Q Consensus       147 ~~~kp~kC~~C~k~F~s~~~L~~H~~~  173 (263)
                      +|-|||.|.+|+|.|-....+.+|...
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhh
Confidence            467999999999999999999998654

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.13  E-value=0.0011  Score=35.08  Aligned_cols=28  Identities=29%  Similarity=0.553  Sum_probs=25.7

Q ss_pred             CccccCcccccccChhhhhhhhhhcCCC
Q 038614          150 NKYKCKTCKKEFRSYQALGGHKASHKKI  177 (263)
Q Consensus       150 kp~kC~~C~k~F~s~~~L~~H~~~H~~~  177 (263)
                      ..|.|..|..+|+..-.|..|+-+|+|+
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            4589999999999999999999999975

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.84  E-value=0.0029  Score=33.66  Aligned_cols=26  Identities=19%  Similarity=0.528  Sum_probs=23.6

Q ss_pred             cceecCccccccCCchhhhhHhhhhc
Q 038614          200 RVFKCPFCDKVFDSGQALGGHKKIHF  225 (263)
Q Consensus       200 kp~~C~~Cgk~F~~~~~L~~H~r~H~  225 (263)
                      |||+|..|.......++|..|.++-.
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccccccccccchhhhhhhhccc
Confidence            69999999999999999999998743

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=95.73  E-value=0.0028  Score=34.40  Aligned_cols=26  Identities=27%  Similarity=0.620  Sum_probs=22.9

Q ss_pred             ceecCccccccCCchhhhhHhh-hhcC
Q 038614          201 VFKCPFCDKVFDSGQALGGHKK-IHFT  226 (263)
Q Consensus       201 p~~C~~Cgk~F~~~~~L~~H~r-~H~~  226 (263)
                      ||.|.+|++.|....-|-+|.. .|.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            7999999999999999999965 5654

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.68  E-value=0.0021  Score=34.54  Aligned_cols=27  Identities=26%  Similarity=0.535  Sum_probs=23.6

Q ss_pred             CccccCc--ccccccChhhhhhhhhhcCC
Q 038614          150 NKYKCKT--CKKEFRSYQALGGHKASHKK  176 (263)
Q Consensus       150 kp~kC~~--C~k~F~s~~~L~~H~~~H~~  176 (263)
                      +||.|.+  |+|.+...+.|..|++.+.|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            6899987  99999999999999987543

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.66  E-value=0.0019  Score=35.12  Aligned_cols=27  Identities=26%  Similarity=0.639  Sum_probs=23.3

Q ss_pred             CccccCc--ccccccChhhhhhhh-hhcCC
Q 038614          150 NKYKCKT--CKKEFRSYQALGGHK-ASHKK  176 (263)
Q Consensus       150 kp~kC~~--C~k~F~s~~~L~~H~-~~H~~  176 (263)
                      +||.|..  |.|.|...+.-..|+ |+|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            5899987  999999999999996 88864

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.45  E-value=0.0039  Score=33.13  Aligned_cols=27  Identities=26%  Similarity=0.523  Sum_probs=22.7

Q ss_pred             CccccCcccccccChhhhhhhhhh-cCC
Q 038614          150 NKYKCKTCKKEFRSYQALGGHKAS-HKK  176 (263)
Q Consensus       150 kp~kC~~C~k~F~s~~~L~~H~~~-H~~  176 (263)
                      +||+|..|.......++|+.|.++ |.+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhsk   28 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CCccccccccccccchhhhhhhhccccc
Confidence            589999999888899999999776 443

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.42  E-value=0.0037  Score=31.76  Aligned_cols=22  Identities=27%  Similarity=0.573  Sum_probs=20.6

Q ss_pred             ceecCccccccCCchhhhhHhh
Q 038614          201 VFKCPFCDKVFDSGQALGGHKK  222 (263)
Q Consensus       201 p~~C~~Cgk~F~~~~~L~~H~r  222 (263)
                      ||+|..|...|-++..|+.|+-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            8999999999999999999974

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.28  E-value=0.0055  Score=32.46  Aligned_cols=26  Identities=31%  Similarity=0.516  Sum_probs=22.9

Q ss_pred             cceecCccccccCCchhhhhHhhhhc
Q 038614          200 RVFKCPFCDKVFDSGQALGGHKKIHF  225 (263)
Q Consensus       200 kp~~C~~Cgk~F~~~~~L~~H~r~H~  225 (263)
                      +||+|..|..-..+.++|..|++.-.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H   26 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFH   26 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHHHc
Confidence            69999999999999999999987533

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.25  E-value=0.0029  Score=33.49  Aligned_cols=24  Identities=29%  Similarity=0.602  Sum_probs=22.2

Q ss_pred             ccccCcccccccChhhhhhhhhhc
Q 038614          151 KYKCKTCKKEFRSYQALGGHKASH  174 (263)
Q Consensus       151 p~kC~~C~k~F~s~~~L~~H~~~H  174 (263)
                      ||.|..|.-.|..+.+|..|+++-
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            799999999999999999999864

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.22  E-value=0.0048  Score=31.45  Aligned_cols=22  Identities=41%  Similarity=0.892  Sum_probs=20.5

Q ss_pred             eecCccccccCCchhhhhHhhh
Q 038614          202 FKCPFCDKVFDSGQALGGHKKI  223 (263)
Q Consensus       202 ~~C~~Cgk~F~~~~~L~~H~r~  223 (263)
                      |.|+.|.+.|..+.++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            8899999999999999999875

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=94.87  E-value=0.0057  Score=33.14  Aligned_cols=26  Identities=27%  Similarity=0.540  Sum_probs=22.1

Q ss_pred             ccccCcccccccChhhhhhhh-hhcCC
Q 038614          151 KYKCKTCKKEFRSYQALGGHK-ASHKK  176 (263)
Q Consensus       151 p~kC~~C~k~F~s~~~L~~H~-~~H~~  176 (263)
                      ||.|.+|++.|...--|.+|+ +.|.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            799999999999999999995 45654

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.62  E-value=0.0055  Score=31.10  Aligned_cols=22  Identities=32%  Similarity=0.759  Sum_probs=20.1

Q ss_pred             ccccCcccccccChhhhhhhhh
Q 038614          151 KYKCKTCKKEFRSYQALGGHKA  172 (263)
Q Consensus       151 p~kC~~C~k~F~s~~~L~~H~~  172 (263)
                      ||+|..|...|.++..|..|+-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            7999999999999999999863

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.58  E-value=0.0078  Score=31.26  Aligned_cols=22  Identities=32%  Similarity=0.656  Sum_probs=20.1

Q ss_pred             ceecCccccccCCchhhhhHhh
Q 038614          201 VFKCPFCDKVFDSGQALGGHKK  222 (263)
Q Consensus       201 p~~C~~Cgk~F~~~~~L~~H~r  222 (263)
                      ||+|..|||.+-.+.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            7999999999999999998864

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.52  E-value=0.0076  Score=33.65  Aligned_cols=24  Identities=21%  Similarity=0.142  Sum_probs=20.1

Q ss_pred             cCccccccCCchhhhhHhhhhcCC
Q 038614          204 CPFCDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       204 C~~Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      |+.=++.|.....|..|+|+|+||
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCCC
Confidence            444467799999999999999986

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.14  E-value=0.037  Score=33.12  Aligned_cols=27  Identities=30%  Similarity=0.610  Sum_probs=24.3

Q ss_pred             cceecCccccccCCchhhhhHhhhhcC
Q 038614          200 RVFKCPFCDKVFDSGQALGGHKKIHFT  226 (263)
Q Consensus       200 kp~~C~~Cgk~F~~~~~L~~H~r~H~~  226 (263)
                      -.|.|-.|+|.|.....|+.|..-|--
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcCc
Confidence            368999999999999999999999853

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.99  E-value=0.014  Score=30.47  Aligned_cols=26  Identities=31%  Similarity=0.373  Sum_probs=23.3

Q ss_pred             ccccCcccccccChhhhhhhhhhcCC
Q 038614          151 KYKCKTCKKEFRSYQALGGHKASHKK  176 (263)
Q Consensus       151 p~kC~~C~k~F~s~~~L~~H~~~H~~  176 (263)
                      |-+|..|.....++.+|..|.++|-.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc~   27 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHCT   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGCC
T ss_pred             CccCcccccccCcHHHHHHhhccccC
Confidence            46899999999999999999999863

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.95  E-value=0.012  Score=30.48  Aligned_cols=23  Identities=26%  Similarity=0.530  Sum_probs=20.5

Q ss_pred             ccccCcccccccChhhhhhhhhh
Q 038614          151 KYKCKTCKKEFRSYQALGGHKAS  173 (263)
Q Consensus       151 p~kC~~C~k~F~s~~~L~~H~~~  173 (263)
                      ||+|..|||.+-.+.+|..|.+.
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            69999999999999999998654

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.75  E-value=0.011  Score=35.57  Aligned_cols=26  Identities=31%  Similarity=0.519  Sum_probs=23.6

Q ss_pred             CccccCcccccccChhhhhhhhhhcC
Q 038614          150 NKYKCKTCKKEFRSYQALGGHKASHK  175 (263)
Q Consensus       150 kp~kC~~C~k~F~s~~~L~~H~~~H~  175 (263)
                      .-|.|..|+|.|.....|..|.+.|-
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            35899999999999999999999885

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.76  E-value=0.019  Score=32.71  Aligned_cols=28  Identities=25%  Similarity=0.568  Sum_probs=24.3

Q ss_pred             CCCccccC--cccccccChhhhhhhhhhcC
Q 038614          148 RTNKYKCK--TCKKEFRSYQALGGHKASHK  175 (263)
Q Consensus       148 ~~kp~kC~--~C~k~F~s~~~L~~H~~~H~  175 (263)
                      -++||.|.  .|+..|...-.|..|+.-|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            36899995  59999999999999988775

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.65  E-value=0.03  Score=29.04  Aligned_cols=23  Identities=39%  Similarity=0.807  Sum_probs=21.2

Q ss_pred             ceecCccccccCCchhhhhHhhh
Q 038614          201 VFKCPFCDKVFDSGQALGGHKKI  223 (263)
Q Consensus       201 p~~C~~Cgk~F~~~~~L~~H~r~  223 (263)
                      .|.|+.|+.....++.|+.|+|.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            48999999999999999999885

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.08  E-value=0.025  Score=31.47  Aligned_cols=20  Identities=20%  Similarity=0.174  Sum_probs=17.7

Q ss_pred             cccccChhhhhhhhhhcCCC
Q 038614          158 KKEFRSYQALGGHKASHKKI  177 (263)
Q Consensus       158 ~k~F~s~~~L~~H~~~H~~~  177 (263)
                      ++.|.....|..|+|+|+|+
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            56799999999999999985

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.77  E-value=0.043  Score=28.59  Aligned_cols=20  Identities=30%  Similarity=0.446  Sum_probs=18.3

Q ss_pred             ccccccCCchhhhhHhhhhc
Q 038614          206 FCDKVFDSGQALGGHKKIHF  225 (263)
Q Consensus       206 ~Cgk~F~~~~~L~~H~r~H~  225 (263)
                      -|+|.|...++++.|+-+|.
T Consensus         8 gC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGGS
T ss_pred             cHHHHhhchHHHHHHhhccC
Confidence            49999999999999999884

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.88  E-value=0.067  Score=29.47  Aligned_cols=28  Identities=21%  Similarity=0.395  Sum_probs=24.2

Q ss_pred             cceecCccccccCCchhhhhHhhhhcCC
Q 038614          200 RVFKCPFCDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       200 kp~~C~~Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      ..|.|..|||.|.....+.+|--..+|.
T Consensus         3 ~afvcskcgktftrrntm~rha~nc~g~   30 (37)
T d1x6ha1           3 AAFVCSKCGKTFTRRNTMARHADNCAGP   30 (37)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHHHCCCC
T ss_pred             ceeeecccccchhcchHHHHHhhhcCCC
Confidence            3589999999999999999998877763

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=90.88  E-value=0.062  Score=27.63  Aligned_cols=24  Identities=33%  Similarity=0.670  Sum_probs=20.7

Q ss_pred             eecCc--cccccCCchhhhhHhhhhc
Q 038614          202 FKCPF--CDKVFDSGQALGGHKKIHF  225 (263)
Q Consensus       202 ~~C~~--Cgk~F~~~~~L~~H~r~H~  225 (263)
                      |.|.+  |+|.|..-..|..|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            56654  9999999999999999886

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.61  E-value=0.048  Score=28.73  Aligned_cols=24  Identities=21%  Similarity=0.480  Sum_probs=20.9

Q ss_pred             CccccCcccccccChhhhhhhhhh
Q 038614          150 NKYKCKTCKKEFRSYQALGGHKAS  173 (263)
Q Consensus       150 kp~kC~~C~k~F~s~~~L~~H~~~  173 (263)
                      +||+|..|.--..+.++|..|++-
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHH
Confidence            589999999888999999999753

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=88.56  E-value=0.14  Score=27.32  Aligned_cols=28  Identities=21%  Similarity=0.525  Sum_probs=24.6

Q ss_pred             cceecCc--cccccCCchhhhhHhhhhcCC
Q 038614          200 RVFKCPF--CDKVFDSGQALGGHKKIHFTY  227 (263)
Q Consensus       200 kp~~C~~--Cgk~F~~~~~L~~H~r~H~~~  227 (263)
                      |.|.|.+  |+..|...-.|..|+-.|+|+
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            5678865  999999999999999999985

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.84  E-value=0.1  Score=28.71  Aligned_cols=26  Identities=19%  Similarity=0.514  Sum_probs=22.2

Q ss_pred             ccccCcccccccChhhhhhhhhhcCC
Q 038614          151 KYKCKTCKKEFRSYQALGGHKASHKK  176 (263)
Q Consensus       151 p~kC~~C~k~F~s~~~L~~H~~~H~~  176 (263)
                      .|.|..|+|.|.....+.+|.....|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            48899999999999999998776655

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=86.24  E-value=0.1  Score=26.80  Aligned_cols=24  Identities=38%  Similarity=0.743  Sum_probs=20.1

Q ss_pred             cccC--cccccccChhhhhhhhhhcC
Q 038614          152 YKCK--TCKKEFRSYQALGGHKASHK  175 (263)
Q Consensus       152 ~kC~--~C~k~F~s~~~L~~H~~~H~  175 (263)
                      |.|.  .|+|.|..-..|+.|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            4564  59999999999999998886

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=85.90  E-value=0.17  Score=27.53  Aligned_cols=25  Identities=28%  Similarity=0.491  Sum_probs=21.7

Q ss_pred             CcceecCccccccCCchhhhhHhhh
Q 038614          199 QRVFKCPFCDKVFDSGQALGGHKKI  223 (263)
Q Consensus       199 ~kp~~C~~Cgk~F~~~~~L~~H~r~  223 (263)
                      ...|.|.-||-.|++.+.|..|+.-
T Consensus         6 parf~c~pcgirfss~stleahqty   30 (36)
T d1y0jb1           6 PARFMCLPCGIAFSSPSTLEAHQAY   30 (36)
T ss_dssp             CCCCBCTTTCCBCSCHHHHHHHTTT
T ss_pred             ccceeccccceeecChhHHHhhhhe
Confidence            3468999999999999999999853

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.57  E-value=0.19  Score=26.24  Aligned_cols=19  Identities=42%  Similarity=0.744  Sum_probs=16.8

Q ss_pred             CccccccCCchhhhhHhhh
Q 038614          205 PFCDKVFDSGQALGGHKKI  223 (263)
Q Consensus       205 ~~Cgk~F~~~~~L~~H~r~  223 (263)
                      +-||+.|++.+-|..|++-
T Consensus         6 ~gc~kifsnrqylnhh~ky   24 (30)
T d2dlka1           6 PGCGRIFSNRQYLNHHKKY   24 (30)
T ss_dssp             TTTCCEESSHHHHHHHHHH
T ss_pred             CCchhhhccHHHHHhHHHH
Confidence            4599999999999999874

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=83.52  E-value=0.26  Score=26.73  Aligned_cols=23  Identities=30%  Similarity=0.641  Sum_probs=20.4

Q ss_pred             CccccCcccccccChhhhhhhhh
Q 038614          150 NKYKCKTCKKEFRSYQALGGHKA  172 (263)
Q Consensus       150 kp~kC~~C~k~F~s~~~L~~H~~  172 (263)
                      -.|.|.-||-.|.+.+.|..|+.
T Consensus         7 arf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             cceeccccceeecChhHHHhhhh
Confidence            45899999999999999999875

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=83.08  E-value=0.21  Score=25.16  Aligned_cols=22  Identities=32%  Similarity=0.611  Sum_probs=19.6

Q ss_pred             cccCcccccccChhhhhhhhhh
Q 038614          152 YKCKTCKKEFRSYQALGGHKAS  173 (263)
Q Consensus       152 ~kC~~C~k~F~s~~~L~~H~~~  173 (263)
                      |.|..|-|.|..+.++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            7899999999999999998664

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.98  E-value=0.18  Score=32.66  Aligned_cols=25  Identities=20%  Similarity=0.418  Sum_probs=21.8

Q ss_pred             CcceecCccccccCCchhhhhHhhh
Q 038614          199 QRVFKCPFCDKVFDSGQALGGHKKI  223 (263)
Q Consensus       199 ~kp~~C~~Cgk~F~~~~~L~~H~r~  223 (263)
                      .-.|-|..|+|.|.+..+|..|+++
T Consensus        13 ~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          13 GGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCEEecccccCccCCHHHHHHHHcc
Confidence            3458999999999999999999763

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.65  E-value=0.27  Score=25.30  Aligned_cols=23  Identities=26%  Similarity=0.557  Sum_probs=20.6

Q ss_pred             ccccCcccccccChhhhhhhhhh
Q 038614          151 KYKCKTCKKEFRSYQALGGHKAS  173 (263)
Q Consensus       151 p~kC~~C~k~F~s~~~L~~H~~~  173 (263)
                      .|+|+.|+-....++.|..|++.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            48999999999999999999764

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.30  E-value=0.2  Score=32.38  Aligned_cols=26  Identities=23%  Similarity=0.345  Sum_probs=22.4

Q ss_pred             CCCccccCcccccccChhhhhhhhhh
Q 038614          148 RTNKYKCKTCKKEFRSYQALGGHKAS  173 (263)
Q Consensus       148 ~~kp~kC~~C~k~F~s~~~L~~H~~~  173 (263)
                      |...|-|..|+|.|.+...|..|.++
T Consensus        12 G~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          12 GGGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCEEecccccCccCCHHHHHHHHcc
Confidence            34559999999999999999999764