Citrus Sinensis ID: 038780

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690----
ENLYSLTIFGYIFFMFLIGVKMDLSLITKLGKREWCISLSLMFNLLLVGMICQTISQILEPQEYLDDWIDLFTATTMLTSFPVVACFLMHLKIINSELGHFALSTALLCDLQSVILVNSYNYMDIITNASIRVGIKAMALSLSLIVFVTIVLRRLMFWIIRRTPEGKPVKSSYTIFIVCLVIVVAVVGETVGIQYFYGPFIFGLTVPTGPPLASTLVEKLDTIVTGLFLPLMATFCGLKSNLRDLSKGLSYPLVFGMTIGLFFKLIAVYLPAVWFNTHSTDAAALSLILTVKGIVELGTFGTNFNKQVRNTGEFTVAVVLILILASIIPIIVRKLHDFSNTYPGYQQRNILHGASNDDLRILVCTHRQDDALAGIRLLEISHPMKESPLSVYGLYLEPLTGGSTPLLINHQLGQKYSKSGAHRQPIIHVFRYFKAEHPKFVQVQVFSAISPPKVMHEDICWLAFDKSISLIILPCHRKWNAKGELISDSQVLRNLNSKVLHKAPSSVGILIDRSRIHGPSSIFVAPFVYRLAVLYMGGEDDMEALAYARRMARSSRVHLTVIHFTLSKESGYARWTNTIDDEFLNGLKKNDEILGNLNIIYKEEAVKDGSDTAMIIRSMEEKYDLVLVGRRRRSDSPFTLGLSEWCDLPELGPIGDLFASSDITASISILVIQQQIIRDEQNEALGDQSFKFSK
cHHHHHHHHHHHHHHHHHHHHccHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHccHHcHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEEccccccHHHHHHHHHHHccccccccEEEEEEEccccccccccHHcccccccccccccccHHHHHHHHHHHHHccccEEEEEEEEEccccccHHHHHHHHHHccccEEEEccccccccccccccccHHHHHHHHHHHHHccccEEEEEcccccccccccccccccEEEEEEEcccccHHHHHHHHHHHHHcccEEEEEEEEEEccccccccccccccHHHHHHHHHcccccccccEEEEEEEccccHHHHHHHHHccccccEEEEccccccccccccccccccccccccHHHHHHHcccccccccEEEEEEcccccccccccccccccccc
cHHHHHHHHHHHHHHHHHHccccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHEHHHHHHHcHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHccHHccccccccccccccEEEEEEEccccccHHHHHHHHHHcccccccEEEEEEEEEEcccccccEEEEcccccccccccccHHHHHHHHHHHHHHccccEEEEEEEEEcccHHHHHHHHHHHHHccEEEEEEEccccccccccEccccHHHHHHHHHHHHccccEEEEEEEccccccccccccccccEEEEEEEEccccHHHHHHHHHHHHHcccEEEEEEEEEccccccccHHHHHHcHHHHHHHHHHHcccccccEEEEEEEEccHHHHHHHHHHHcccccEEEEEccccccccHHcccccHHHcccccccHHHcccccccccEEEEEEEEEEEccccccccccccccccc
ENLYSLTIFGYIFFMFLIGVKMDLSLITKLGKREWCISLSLMFNLLLVGMICQTISQILEPQEYLDDWIDLFTATTMLTSFPVVACFLMHLKIINSELGHFALSTALLCDLQSVILVNSYNYMDIITNASIRVGIKAMALSLSLIVFVTIVLRRLMFWIIRrtpegkpvkssyTIFIVCLVIVVAVVGETVGIQYfygpfifgltvptgpplaSTLVEKLDTIVTGLFLPLMATFCGlksnlrdlskglsyplvfGMTIGLFFKLIAVYLPavwfnthsTDAAALSLILTVKGIVelgtfgtnfnkqvrnTGEFTVAVVLILILASIIPIIVRKlhdfsntypgyqqrnilhgasnddLRILVCTHRQDDALAGIRLLEishpmkesplsvyglylepltggstpllinhqlgqkysksgahrqpiIHVFRYfkaehpkfVQVQVFsaisppkvmheDICWLAFdksisliilpchrkwnakgelisdSQVLRNLNskvlhkapssvgilidrsrihgpssifvAPFVYRLAVLYMGGEDDMEALAYARRMARSSRVHLTVIHFTlskesgyarwtNTIDDEFLNGLKKNDEILGNLNIIYKeeavkdgsdTAMIIRSMEEKYDLVLVgrrrrsdspftlglsewcdlpelgpigdlfassditaSISILVIQQQIIRDEqnealgdqsfkfsk
ENLYSLTIFGYIFFMFLIGVKMDLSLITKLGKREWCISLSLMFNLLLVGMICQTISQILEPQEYLDDWIDLFTATTMLTSFPVVACFLMHLKIINSELGHFALSTALLCDLQSVILVNSYNYMDIITNASIRVGIKAMALSLSLIVFVTIVLRRLMFWIIRRtpegkpvkssyTIFIVCLVIVVAVVGETVGIQYFYGPFIFGLTVPTGPPLASTLVEKLDTIVTGLFLPLMATFCGLKSNLRDLSKGLSYPLVFGMTIGLFFKLIAVYLPAVWFNTHSTDAAALSLILTVKGIVELGTFGTNFNKQVRNTGEFTVAVVLILILASIIPIIVRKLHDFSNTYPGYQQRNILHGASNDDLRILVCTHRQDDALAGIRLLEISHPMKESPLSVYGLYLEPLTGGSTPLLINHQLGQKYSKSGAHRQPIIHVFRYFKAEHPKFVQVQVFSAISPPKVMHEDICWLAFDKSISLIILPCHRKWNAKGELISDSQVLRNLNSKVLHKAPSSVGILIDRSRIHGPSSIFVAPFVYRLAVLYMGGEDDMEALAYARRMARSSRVHLTVIHftlskesgyarwTNTIDDEFLNGLKKNDEILGNLNIIykeeavkdgsdTAMIIRSMEEKYDLVLVGRRRRSDSPFTLGLSEWCDLPELGPIGDLFASSDITASISILVIQQQIIRDEQnealgdqsfkfsk
ENLYSLTIFGYIFFMFLIGVKMDLSLITKLGKREWCISLSLMFNLLLVGMICQTISQILEPQEYLDDWIDLFTATTMLTSFPVVACFLMHLKIINSELGHFALSTALLCDLQSVILVNSYNYMDIITNASIRVGIKAMALSLSLIVFVTIVLRRLMFWIIRRTPEGKPVKSSYTifivclvivvavvgetvgiQYFYGPFIFGLTVPTGPPLASTLVEKLDTIVTGLFLPLMATFCGLKSNLRDLSKGLSYPLVFGMTIGLFFKLIAVYLPAVWFNTHSTDAAALSLILTVKGIVELGTFGTNFNKQVRNTGEFTvavvlililasiipiivRKLHDFSNTYPGYQQRNILHGASNDDLRILVCTHRQDDALAGIRLLEISHPMKESPLSVYGLYLEPLTGGSTPLLINHQLGQKYSKSGAHRQPIIHVFRYFKAEHPKFVQVQVFSAISPPKVMHEDICWLAFDKSISLIILPCHRKWNAKGELISDSQVLRNLNSKVLHKAPSSVGILIDRSRIHGPSSIFVAPFVYRLAVLYMGGEDDMEALAYARRMARSSRVHLTVIHFTLSKESGYARWTNTIDDEFLNGLKKNDEILGNLNIIYKEEAVKDGSDTAMIIRSMEEKYDLVLVGRRRRSDSPFTLGLSEWCDLPELGPIGDLFASSDITASISILViqqqiiRDEQNEALGDQSFKFSK
**LYSLTIFGYIFFMFLIGVKMDLSLITKLGKREWCISLSLMFNLLLVGMICQTISQILEPQEYLDDWIDLFTATTMLTSFPVVACFLMHLKIINSELGHFALSTALLCDLQSVILVNSYNYMDIITNASIRVGIKAMALSLSLIVFVTIVLRRLMFWIIRRTPEGKPVKSSYTIFIVCLVIVVAVVGETVGIQYFYGPFIFGLTVPTGPPLASTLVEKLDTIVTGLFLPLMATFCGLKSNLRDLSKGLSYPLVFGMTIGLFFKLIAVYLPAVWFNTHSTDAAALSLILTVKGIVELGTFGTNFNKQVRNTGEFTVAVVLILILASIIPIIVRKLHDFSNTYPGYQQRNILHGASNDDLRILVCTHRQDDALAGIRLLEISHPMKESPLSVYGLYLEPLTGGSTPLLINHQLGQKYSKSGAHRQPIIHVFRYFKAEHPKFVQVQVFSAISPPKVMHEDICWLAFDKSISLIILPCHRKWNAKGELISDSQVLRNLNSKVLHKAPSSVGILIDRSRIHGPSSIFVAPFVYRLAVLYMGGEDDMEALAYARRMARSSRVHLTVIHFTLSKESGYARWTNTIDDEFLNGLKKNDEILGNLNIIYKEEAVKDGSDTAMIIRSMEEKYDLVLVGRRRRSDSPFTLGLSEWCDLPELGPIGDLFASSDITASISILVIQQQIIR****************
ENLYSLTIFGYIFFMFLIGVKMDLSLITKLGKREWCISLSLMFNLLLVGMICQTISQILEPQEYLDDWIDLFTATTMLTSFPVVACFLMHLKIINSELGHFALSTALLCDLQSVILVNSYNYMDIITNASIRVGIKAMALSLSLIVFVTIVLRRLMFWIIRRTPEGKPVKSSYTIFIVCLVIVVAVVGETVGIQYFYGPFIFGLTVPTGPPLASTLVEKLDTIVTGLFLPLMATFCGLKSNLRDLSKGLSYPLVFGMTIGLFFKLIAVYLPAVWFNTHSTDAAALSLILTVKGIVELGTFGTNFNKQVRNTGEFTVAVVLILILASIIPIIVRKLHDFSN**********************VCTHRQDDALAGIRLLEISHPMKESPLSVYGLYLEPLTGGST*********************IIHVFRYFKAEHPKFVQVQVFSAISPPKVMHEDICWLAFDKSISLIILPCHRKWNA*****SD*QVLRNLNSKVLHKAPSSVGILIDRSRI**********FVYRLAVLYMGGEDDMEALAYARRMARSSRVHLTVIHFTL***************EFLNGLKKNDEILGNLNIIYKEEAVKDGSDTAMIIRSMEEKYDLVLVGRRRR************CDLPELGPIGDLFASSDITASISILVIQ*********************
ENLYSLTIFGYIFFMFLIGVKMDLSLITKLGKREWCISLSLMFNLLLVGMICQTISQILEPQEYLDDWIDLFTATTMLTSFPVVACFLMHLKIINSELGHFALSTALLCDLQSVILVNSYNYMDIITNASIRVGIKAMALSLSLIVFVTIVLRRLMFWIIRRTPEGKPVKSSYTIFIVCLVIVVAVVGETVGIQYFYGPFIFGLTVPTGPPLASTLVEKLDTIVTGLFLPLMATFCGLKSNLRDLSKGLSYPLVFGMTIGLFFKLIAVYLPAVWFNTHSTDAAALSLILTVKGIVELGTFGTNFNKQVRNTGEFTVAVVLILILASIIPIIVRKLHDFSNTYPGYQQRNILHGASNDDLRILVCTHRQDDALAGIRLLEISHPMKESPLSVYGLYLEPLTGGSTPLLINHQLGQKYSKSGAHRQPIIHVFRYFKAEHPKFVQVQVFSAISPPKVMHEDICWLAFDKSISLIILPCHRKWNAKGELISDSQVLRNLNSKVLHKAPSSVGILIDRSRIHGPSSIFVAPFVYRLAVLYMGGEDDMEALAYARRMARSSRVHLTVIHFTLSKESGYARWTNTIDDEFLNGLKKNDEILGNLNIIYKEEAVKDGSDTAMIIRSMEEKYDLVLVGRRRRSDSPFTLGLSEWCDLPELGPIGDLFASSDITASISILVIQQQIIRDEQNEALGDQSFKFSK
ENLYSLTIFGYIFFMFLIGVKMDLSLITKLGKREWCISLSLMFNLLLVGMICQTISQILEPQEYLDDWIDLFTATTMLTSFPVVACFLMHLKIINSELGHFALSTALLCDLQSVILVNSYNYMDIITNASIRVGIKAMALSLSLIVFVTIVLRRLMFWIIRRTPEGKPVKSSYTIFIVCLVIVVAVVGETVGIQYFYGPFIFGLTVPTGPPLASTLVEKLDTIVTGLFLPLMATFCGLKSNLRDLSKGLSYPLVFGMTIGLFFKLIAVYLPAVWFNTHSTDAAALSLILTVKGIVELGTFGTNFNKQVRNTGEFTVAVVLILILASIIPIIVRKLHDFSNTYPGYQQRNILHGASNDDLRILVCTHRQDDALAGIRLLEISHPMKESPLSVYGLYLEPLTGGSTPLLINHQLGQ****SGAHRQPIIHVFRYFKAEHPKFVQVQVFSAISPPKVMHEDICWLAFDKSISLIILPCHRKWNAKGELISDSQVLRNLNSKVLHKAPSSVGILIDRSRIHGPSSIFVAPFVYRLAVLYMGGEDDMEALAYARRMARSSRVHLTVIHFTLSKESGYARWTNTIDDEFLNGLKKNDEILGNLNIIYKEEAVKDGSDTAMIIRSMEEKYDLVLVGRRRRSDSPFTLGLSEWCDLPELGPIGDLFASSDITASISILVIQQQIIRD***************
oooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ENLYSLTIFGYIFFMFLIGVKMDLSLITKLGKREWCISLSLMFNLLLVGMICQTISQILEPQEYLDDWIDLFTATTMLTSFPVVACFLMHLKIINSELGHFALSTALLCDLQSVILVNSYNYMDIITNASIRVGIKAMALSLSLIVFVTIVLRRLMFWIIRRTPEGKPVKSSYTIFIVCLVIVVAVVGETVGIQYFYGPFIFGLTVPTGPPLASTLVEKLDTIVTGLFLPLMATFCGLKSNLRDLSKGLSYPLVFGMTIGLFFKLIAVYLPAVWFNTHSTDAAALSLILTVKGIVELGTFGTNFNKQVRNTGEFTVAVVLILILASIIPIIVRKLHDFSNTYPGYQQRNILHGASNDDLRILVCTHRQDDALAGIRLLEISHPMKESPLSVYGLYLEPLTGGSTPLLINHQLGQKYSKSGAHRQPIIHVFRYFKAEHPKFVQVQVFSAISPPKVMHEDICWLAFDKSISLIILPCHRKWNAKGELISDSQVLRNLNSKVLHKAPSSVGILIDRSRIHGPSSIFVAPFVYRLAVLYMGGEDDMEALAYARRMARSSRVHLTVIHFTLSKESGYARWTNTIDDEFLNGLKKNDEILGNLNIIYKEEAVKDGSDTAMIIRSMEEKYDLVLVGRRRRSDSPFTLGLSEWCDLPELGPIGDLFASSDITASISILVIQQQIIRDEQNEALGDQSFKFSK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query694 2.2.26 [Sep-21-2011]
Q9FYC1817 Cation/H(+) antiporter 4 yes no 0.958 0.813 0.361 1e-117
Q9FFB8822 Cation/H(+) antiporter 3 no no 0.946 0.799 0.350 1e-113
Q9SIT5821 Cation/H(+) antiporter 15 no no 0.956 0.808 0.335 1e-100
Q58P71816 Cation/H(+) antiporter 8 no no 0.927 0.789 0.324 2e-89
Q3EDG3815 Cation/H(+) antiporter 5 no no 0.919 0.782 0.321 3e-86
Q58P69783 Cation/H(+) antiporter 10 no no 0.946 0.839 0.307 6e-85
Q9FFB7800 Cation/H(+) antiporter 9 no no 0.927 0.805 0.308 4e-84
Q8GX92818 Cation/H(+) antiporter 6A no no 0.925 0.784 0.311 6e-84
Q9FYC0770 Cation/H(+) antiporter 12 no no 0.926 0.835 0.306 5e-83
Q9ZUV9801 Cation/H(+) antiporter 7 no no 0.925 0.801 0.287 3e-81
>sp|Q9FYC1|CHX4_ARATH Cation/H(+) antiporter 4 OS=Arabidopsis thaliana GN=CHX4 PE=2 SV=1 Back     alignment and function desciption
 Score =  422 bits (1084), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 256/708 (36%), Positives = 399/708 (56%), Gaps = 43/708 (6%)

Query: 4   YSLTIFG------YIFFMFLIGVKMDLSLITKLGKREWCISLSLMFNLLLVGMICQTISQ 57
           Y  T+FG      Y+ F FL+GVKMDLSLI   G++   I LS   ++LL   +C  I  
Sbjct: 113 YKETLFGLVGACSYMMFWFLMGVKMDLSLIRSTGRKAVAIGLS---SVLLSITVCALIFF 169

Query: 58  IL---------EPQEYLDDWIDLFTATTMLTSFPVVACFLMHLKIINSELGHFALSTALL 108
           ++         EP     + I ++     L+SFPV+   L  L++ NSELG  A+S+A++
Sbjct: 170 LILRDVGTKKGEPVMSFFEIIFIYLIQC-LSSFPVIGNLLFELRLQNSELGRLAMSSAVI 228

Query: 109 CDLQSVILVNSYNYMDIITNASIR----------VGIKAMALSLSLIVFVTI---VLRRL 155
            D  + IL     ++  + +   R          VG + M  + ++++FV     + R L
Sbjct: 229 SDFSTSILSAVLVFLKELKDDKSRLGSVFIGDVIVGNRPMKRAGTVVLFVCFAIYIFRPL 288

Query: 156 MFWIIRRTPEGKPVKSSYTIFIVCLVIVVAVVGETVGIQYFYGPFIFGLTVPTGPPLAST 215
           MF+II+RTP G+PVK  Y   I+ LV   A++ +      F GPFI GL VP GPPL S 
Sbjct: 289 MFFIIKRTPSGRPVKKFYIYAIIILVFGSAILADWCKQSIFIGPFILGLAVPHGPPLGSA 348

Query: 216 LVEKLDTIVTGLFLPLMATFCGLKSNLRDLSKGLSYP-LVFGMTIGLFFKLIAVYLPAVW 274
           +++K +++V G FLP        + +   L   +    +V  +++    K     LPA  
Sbjct: 349 ILQKFESVVFGTFLPFFVATSAEEIDTSILQSWIDLKSIVILVSVSFIVKFALTTLPAFL 408

Query: 275 FNTHSTDAAALSLILTVKGIVELGTFGTNFNKQVRNTGEFTVAVVLILILASIIPIIVRK 334
           +   + D  ALSLI++ KGI E G +G  + +       FTV  + IL+ +++IP ++++
Sbjct: 409 YGMPAKDCIALSLIMSFKGIFEFGAYGYAYQRGTIRPVTFTVLSLYILLNSAVIPPLLKR 468

Query: 335 LHDFSNTYPGYQQRNILHGASNDDLRILVCTHRQDDALAGIRLLEISHPMKESPLSVYGL 394
           ++D S  Y GY++RN+LH   N +LRIL C ++ DD    I LLE + P +E+P++ Y L
Sbjct: 469 IYDPSRMYAGYEKRNMLHMKPNSELRILSCIYKTDDIRPMINLLEATCPSRENPVATYVL 528

Query: 395 YLEPLTGGSTPLLINHQLGQKYSKSGAHR-QPIIHVFRYFKAEHPKFVQVQVFSAISPPK 453
           +L  L G + P+LI+H+L  + S++ ++  + ++  F  F  +    V V  ++A+S PK
Sbjct: 529 HLMELVGQANPVLISHRLQTRKSENMSYNSENVVVSFEQFHNDFFGSVFVSTYTALSVPK 588

Query: 454 VMHEDICWLAFDKSISLIILPCHRKWNAKGE-LISDSQVLRNLNSKVLHKAPSSVGILID 512
           +MH DIC LA + + SLIILP H+ W+A G  ++SDS ++R LN  VL  +P SVGI + 
Sbjct: 589 MMHGDICMLALNNTTSLIILPFHQTWSADGSAIVSDSLMIRQLNKSVLDLSPCSVGIFVY 648

Query: 513 RSRIHGPSSI--FVAPF-VYRLAVLYMGGEDDMEALAYARRMARSSRVHLTVIHFTLSKE 569
           RS  +G  +I    A F  Y++ +L++GG+DD EAL+ A+RMAR SR+ +TV+    S++
Sbjct: 649 RSS-NGRRTIKETAANFSSYQVCMLFLGGKDDREALSLAKRMARDSRITITVVSLISSEQ 707

Query: 570 SG--YARWTNTIDDEFLNGLKKNDEILGNLNIIYKEEAVKDGSDTAMIIRSMEEKYDLVL 627
                  W   +D E L  +K N  +L   +I++ EE V D + T+ +++S+  +YDL +
Sbjct: 708 RANQATDWDRMLDLELLRDVKSN--VLAGADIVFSEEVVNDANQTSQLLKSIANEYDLFI 765

Query: 628 VGRRRRSDSPFTLGLSEWCDLPELGPIGDLFASSDITASISILVIQQQ 675
           VGR +   S FT GL EW +  ELG IGDL  S D+    S+LVIQQQ
Sbjct: 766 VGREKGRKSVFTEGLEEWSEFEELGIIGDLLTSQDLNCQASVLVIQQQ 813
May operate as a cation/H(+) antiporter.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9FFB8|CHX3_ARATH Cation/H(+) antiporter 3 OS=Arabidopsis thaliana GN=CHX3 PE=2 SV=1 Back     alignment and function description
>sp|Q9SIT5|CHX15_ARATH Cation/H(+) antiporter 15 OS=Arabidopsis thaliana GN=CHX15 PE=2 SV=1 Back     alignment and function description
>sp|Q58P71|CHX8_ARATH Cation/H(+) antiporter 8 OS=Arabidopsis thaliana GN=CHX8 PE=2 SV=1 Back     alignment and function description
>sp|Q3EDG3|CHX5_ARATH Cation/H(+) antiporter 5 OS=Arabidopsis thaliana GN=CHX5 PE=2 SV=1 Back     alignment and function description
>sp|Q58P69|CHX10_ARATH Cation/H(+) antiporter 10 OS=Arabidopsis thaliana GN=CHX10 PE=2 SV=2 Back     alignment and function description
>sp|Q9FFB7|CHX9_ARATH Cation/H(+) antiporter 9 OS=Arabidopsis thaliana GN=CHX9 PE=2 SV=1 Back     alignment and function description
>sp|Q8GX92|CHX6A_ARATH Cation/H(+) antiporter 6A OS=Arabidopsis thaliana GN=CHX6a PE=2 SV=2 Back     alignment and function description
>sp|Q9FYC0|CHX12_ARATH Cation/H(+) antiporter 12 OS=Arabidopsis thaliana GN=CHX12 PE=2 SV=2 Back     alignment and function description
>sp|Q9ZUV9|CHX7_ARATH Cation/H(+) antiporter 7 OS=Arabidopsis thaliana GN=CHX7 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query694
224109222789 cation proton exchanger [Populus trichoc 0.969 0.852 0.443 1e-156
224093643 806 cation proton exchanger [Populus trichoc 0.958 0.825 0.444 1e-154
224112293788 cation proton exchanger [Populus trichoc 0.945 0.832 0.422 1e-148
255559583678 hypothetical protein RCOM_0688100 [Ricin 0.906 0.927 0.407 1e-136
225434429764 PREDICTED: cation/H(+) antiporter 3-like 0.953 0.866 0.388 1e-133
255564875776 monovalent cation:proton antiporter, put 0.953 0.853 0.377 1e-128
449452132770 PREDICTED: cation/H(+) antiporter 4-like 0.958 0.863 0.378 1e-120
297815638 817 ATCHX4 [Arabidopsis lyrata subsp. lyrata 0.958 0.813 0.362 1e-116
357493727 801 K(+)/H(+) antiporter [Medicago truncatul 0.956 0.828 0.365 1e-115
15230545 817 cation/H(+) antiporter 4 [Arabidopsis th 0.958 0.813 0.361 1e-115
>gi|224109222|ref|XP_002315126.1| cation proton exchanger [Populus trichocarpa] gi|222864166|gb|EEF01297.1| cation proton exchanger [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  559 bits (1440), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 308/694 (44%), Positives = 436/694 (62%), Gaps = 21/694 (3%)

Query: 5   SLTIFGYIFFMFLIGVKMDLSLITKLGKREWCISLSLMFNLLLVGMICQTISQILEPQEY 64
           SL+  GYI F FLIGV+M+ SLI K G+    ++ +L+F    + M+   I+   + ++ 
Sbjct: 105 SLSKIGYILFSFLIGVRMEPSLIWKTGRTATFLA-TLLFIFHHIAMLSIDITFDKDKEKL 163

Query: 65  LDDWI-------DLFTATTMLTSFPVVACFLMHLKIINSELGHFALSTALLCDLQSVILV 117
              ++        ++ A+   T F +V+  LM LKIINS+LGH AL+++LL  L +  + 
Sbjct: 164 TAGFVLAKEAFSAIYFASITTTEFVMVSTILMQLKIINSQLGHLALASSLLFKLATFAVG 223

Query: 118 NSYNYMDIITNASIRVGIKAMALSLSLIVFVTIVLRRLMFWIIRRTPEGKPVKSSYTIFI 177
             + +++   N S +VG + +  SL+LIVF  +V R+ M + IR TP GKP K  YT   
Sbjct: 224 TLFGFINAFVNISSQVGARIVIYSLALIVFTVVVSRKTMLFFIRSTPVGKPTKEIYTTMT 283

Query: 178 VCLVIVVAVVGETVGIQYFYGPFIFGLTVPTGPPLASTLVEKLDTIVTGLFLPLMATFCG 237
           V ++ +++ +G+ VG+ Y YGP I GL VP   PLA  LV K DT+V+G FLPLMA FC 
Sbjct: 284 VGVLFLLSAIGDEVGLHYMYGPLILGLAVPARSPLAEVLVAKFDTLVSGFFLPLMAVFCS 343

Query: 238 LKSNLRDLSKGLSYPLVFGMT-IGLFFKLIAVYLPAVWFNTHSTDAAALSLILTVKGIVE 296
            K NL          +   ++ IG   KL+  ++ A +       A AL++IL  KGI E
Sbjct: 344 SKLNLFQFIHEFKDAVHLQISLIGYVMKLLVTFIGAYFCKIPLRHAIALTIILNAKGITE 403

Query: 297 LGTFGTNFNKQVRNTGEFTVA--VVLILILASIIPIIVRKLHDFSNTYPGYQQRNILHGA 354
           +  F +       +  E   A  + L+ +L +  P++++KL++ ++ Y GYQ ++I   +
Sbjct: 404 IAQFLS-----FGDITELDAASGIFLVFLLQAFQPLLIKKLYNPADQYIGYQNKSIEKAS 458

Query: 355 SNDDLRILVCTHRQDDALAGIRLLEISHPMKESPLSVYGLYLEPLTGGSTPLLINHQLGQ 414
            + +L+IL C HRQ+DA+A I+LL+ S+P K+SPLSVY L LE L   STPLLINHQLGQ
Sbjct: 459 DDAELQILACAHRQEDAVAAIKLLQYSNPTKQSPLSVYVLCLEELVSSSTPLLINHQLGQ 518

Query: 415 KYSKSGAHR-QPIIHVFRYFKAEHPKFVQVQVFSAISPPKVMHEDICWLAFDKSISLIIL 473
           K S     R QPII +F+YF++++ KFV+V +F+A+SP K MHEDICWL+FDK+ SLIIL
Sbjct: 519 KMSSYRVSRSQPIIDIFKYFESQYKKFVRVNMFTAVSPLKQMHEDICWLSFDKACSLIIL 578

Query: 474 PCHRKWNAKGELISDSQVLRNLNSKVLHKAPSSVGILIDRSRIHGPSSIFVAPFVYRLAV 533
           P H+KWN+KG+L+S +   RNLN  VL +AP SVGILIDRSR  G SSIF+A   YR+A 
Sbjct: 579 PFHKKWNSKGKLVSSNTDTRNLNITVLERAPCSVGILIDRSRTQGLSSIFLAS-TYRVAA 637

Query: 534 LYMGGEDDMEALAYARRMARSSRVHLTVIHF-TLSKESGYARWTNTIDDEFLNGLKKNDE 592
           L+  G DD EA+AYA RMA    +HLTV  F T + E  Y  W   ++ EFL  LK    
Sbjct: 638 LFFEGPDDREAVAYALRMAGRFGLHLTVKRFITPTTEQVYHDWDYMLNSEFLRNLKLGVS 697

Query: 593 ILGNLNIIYKEEAVKDGSDTAMIIRSMEEKYDLVLVGRRRRSDSPFTLGLSEWCDLPELG 652
              ++N  Y EE V+DG+DT+ II+SM   YDL++ GRR +++     GLSEW DL ELG
Sbjct: 698 ESSSIN--YIEETVRDGADTSSIIKSMVGGYDLIMAGRRHQTEPQAFSGLSEWMDLQELG 755

Query: 653 PIGDLFASSDITASISILVIQQQIIRDEQNEALG 686
           PIGDL AS DIT++IS+LV+QQQI++   +  L 
Sbjct: 756 PIGDLLASEDITSAISVLVVQQQIMKASHSSTLN 789

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224093643|ref|XP_002309947.1| cation proton exchanger [Populus trichocarpa] gi|222852850|gb|EEE90397.1| cation proton exchanger [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224112293|ref|XP_002316145.1| cation proton exchanger [Populus trichocarpa] gi|222865185|gb|EEF02316.1| cation proton exchanger [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255559583|ref|XP_002520811.1| hypothetical protein RCOM_0688100 [Ricinus communis] gi|223539942|gb|EEF41520.1| hypothetical protein RCOM_0688100 [Ricinus communis] Back     alignment and taxonomy information
>gi|225434429|ref|XP_002277574.1| PREDICTED: cation/H(+) antiporter 3-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|255564875|ref|XP_002523431.1| monovalent cation:proton antiporter, putative [Ricinus communis] gi|223537321|gb|EEF38951.1| monovalent cation:proton antiporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449452132|ref|XP_004143814.1| PREDICTED: cation/H(+) antiporter 4-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297815638|ref|XP_002875702.1| ATCHX4 [Arabidopsis lyrata subsp. lyrata] gi|297321540|gb|EFH51961.1| ATCHX4 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|357493727|ref|XP_003617152.1| K(+)/H(+) antiporter [Medicago truncatula] gi|355518487|gb|AET00111.1| K(+)/H(+) antiporter [Medicago truncatula] Back     alignment and taxonomy information
>gi|15230545|ref|NP_190076.1| cation/H(+) antiporter 4 [Arabidopsis thaliana] gi|75309920|sp|Q9FYC1.1|CHX4_ARATH RecName: Full=Cation/H(+) antiporter 4; AltName: Full=Protein CATION/H+ EXCHANGER 4; Short=AtCHX4 gi|9798393|emb|CAC03540.1| putative protein [Arabidopsis thaliana] gi|95105526|gb|ABF54930.1| cation/H+ exchanger [Arabidopsis thaliana] gi|332644445|gb|AEE77966.1| cation/H(+) antiporter 4 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query694
TAIR|locus:2082142817 CHX4 "cation/H+ exchanger 4" [ 0.851 0.723 0.351 1.7e-107
TAIR|locus:2172631822 CHX3 "cation/H+ exchanger 3" [ 0.848 0.716 0.341 3.2e-104
TAIR|locus:2082102783 CHX10 "cation/H+ exchanger 10" 0.951 0.842 0.306 2e-81
TAIR|locus:2172646800 CHX9 "cation/H+ exchanger 9" [ 0.943 0.818 0.304 2.2e-80
TAIR|locus:2205165815 ATCHX5 [Arabidopsis thaliana ( 0.932 0.793 0.312 1.1e-78
TAIR|locus:2205150818 CHX6A "cation/H+ exchanger 6A" 0.938 0.795 0.306 9.3e-75
TAIR|locus:2007392829 CHX14 "cation/hydrogen exchang 0.945 0.791 0.294 6.7e-72
TAIR|locus:2060827831 ATCHX13 [Arabidopsis thaliana 0.953 0.796 0.274 2.3e-71
TAIR|locus:2054152821 CHX15 "cation/hydrogen exchang 0.835 0.706 0.311 4.3e-70
TAIR|locus:2031968867 CHX23 "cation/H+ exchanger 23" 0.942 0.754 0.276 2.5e-65
TAIR|locus:2082142 CHX4 "cation/H+ exchanger 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 931 (332.8 bits), Expect = 1.7e-107, Sum P(2) = 1.7e-107
 Identities = 216/615 (35%), Positives = 337/615 (54%)

Query:    78 LTSFPVVACFLMHLKIINSELGHFALSTALLCDLQ----SVILV------NSYNYMDIIT 127
             L+SFPV+   L  L++ NSELG  A+S+A++ D      S +LV      +  + +  + 
Sbjct:   198 LSSFPVIGNLLFELRLQNSELGRLAMSSAVISDFSTSILSAVLVFLKELKDDKSRLGSVF 257

Query:   128 NASIRVGIKAMALSLSLIVFVTI---VLRRLMFWIIRRTPEGKPVKSSYTXXXXXXXXXX 184
                + VG + M  + ++++FV     + R LMF+II+RTP G+PVK  Y           
Sbjct:   258 IGDVIVGNRPMKRAGTVVLFVCFAIYIFRPLMFFIIKRTPSGRPVKKFYIYAIIILVFGS 317

Query:   185 XXXXXXXXXQYFYGPFIFGLTVPTGPPLASTLVEKLDTIVTGLFLPLMATFCGLKSNLRD 244
                        F GPFI GL VP GPPL S +++K +++V G FLP        + +   
Sbjct:   318 AILADWCKQSIFIGPFILGLAVPHGPPLGSAILQKFESVVFGTFLPFFVATSAEEIDTSI 377

Query:   245 LSKGLSYP-LVFGMTIGLFFKLIAVYLPAVWFNTHSTDAAALSLILTVKGIVELGTFGTN 303
             L   +    +V  +++    K     LPA  +   + D  ALSLI++ KGI E G +G  
Sbjct:   378 LQSWIDLKSIVILVSVSFIVKFALTTLPAFLYGMPAKDCIALSLIMSFKGIFEFGAYGYA 437

Query:   304 FNKQVRNTGEFTXXXXXXXXXXXXXXXXXRKLHDFSNTYPGYQQRNILHGASNDDLRILV 363
             + +       FT                 ++++D S  Y GY++RN+LH   N +LRIL 
Sbjct:   438 YQRGTIRPVTFTVLSLYILLNSAVIPPLLKRIYDPSRMYAGYEKRNMLHMKPNSELRILS 497

Query:   364 CTHRQDDALAGIRLLEISHPMKESPLSVYGLYLEPLTGGSTPLLINHQLGQKYSKSGAHR 423
             C ++ DD    I LLE + P +E+P++ Y L+L  L G + P+LI+H+L  + S++ ++ 
Sbjct:   498 CIYKTDDIRPMINLLEATCPSRENPVATYVLHLMELVGQANPVLISHRLQTRKSENMSYN 557

Query:   424 -QPIIHVFRYFKAEHPKFVQVQVFSAISPPKVMHEDICWLAFDKSISLIILPCHRKWNAK 482
              + ++  F  F  +    V V  ++A+S PK+MH DIC LA + + SLIILP H+ W+A 
Sbjct:   558 SENVVVSFEQFHNDFFGSVFVSTYTALSVPKMMHGDICMLALNNTTSLIILPFHQTWSAD 617

Query:   483 GE-LISDSQVLRNLNSKVLHKAPSSVGILIDRSRIHGPSSI--FVAPFV-YRLAVLYMGG 538
             G  ++SDS ++R LN  VL  +P SVGI + RS  +G  +I    A F  Y++ +L++GG
Sbjct:   618 GSAIVSDSLMIRQLNKSVLDLSPCSVGIFVYRSS-NGRRTIKETAANFSSYQVCMLFLGG 676

Query:   539 EDDMEALAYARRMARSSRVHLTVIHFTLSKE-SGYAR-WTNTIDDEFLNGLKKNDEILGN 596
             +DD EAL+ A+RMAR SR+ +TV+    S++ +  A  W   +D E L  +K N  +L  
Sbjct:   677 KDDREALSLAKRMARDSRITITVVSLISSEQRANQATDWDRMLDLELLRDVKSN--VLAG 734

Query:   597 LNIIYKEEAVKDGSDTAMIIRSMEEKYDLVLVGRRRRSDSPFTLGLSEWCDLPELGPIGD 656
              +I++ EE V D + T+ +++S+  +YDL +VGR +   S FT GL EW +  ELG IGD
Sbjct:   735 ADIVFSEEVVNDANQTSQLLKSIANEYDLFIVGREKGRKSVFTEGLEEWSEFEELGIIGD 794

Query:   657 LFASSDITASISILV 671
             L  S D+    S+LV
Sbjct:   795 LLTSQDLNCQASVLV 809
GO:0006812 "cation transport" evidence=IEA;IC
GO:0008152 "metabolic process" evidence=IEA
GO:0015299 "solute:hydrogen antiporter activity" evidence=IEA
GO:0015385 "sodium:hydrogen antiporter activity" evidence=ISS
GO:0016021 "integral to membrane" evidence=IEA
GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA
GO:0035725 "sodium ion transmembrane transport" evidence=ISS
GO:0055085 "transmembrane transport" evidence=IEA
GO:0005451 "monovalent cation:hydrogen antiporter activity" evidence=NAS
GO:0006814 "sodium ion transport" evidence=RCA
GO:0010351 "lithium ion transport" evidence=RCA
TAIR|locus:2172631 CHX3 "cation/H+ exchanger 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082102 CHX10 "cation/H+ exchanger 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2172646 CHX9 "cation/H+ exchanger 9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2205165 ATCHX5 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2205150 CHX6A "cation/H+ exchanger 6A" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2007392 CHX14 "cation/hydrogen exchanger 14" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2060827 ATCHX13 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2054152 CHX15 "cation/hydrogen exchanger 15" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031968 CHX23 "cation/H+ exchanger 23" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FYC1CHX4_ARATHNo assigned EC number0.36150.95820.8139yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pg.C_LG_X001642
cation proton exchanger (789 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query694
PLN03159832 PLN03159, PLN03159, cation/H(+) antiporter 15; Pro 1e-126
pfam00999370 pfam00999, Na_H_Exchanger, Sodium/hydrogen exchang 8e-23
COG0475397 COG0475, KefB, Kef-type K+ transport systems, memb 9e-23
cd00293130 cd00293, USP_Like, Usp: Universal stress protein f 6e-05
pfam00582139 pfam00582, Usp, Universal stress protein family 8e-05
TIGR00932273 TIGR00932, 2a37, transporter, monovalent cation:pr 3e-04
>gnl|CDD|215608 PLN03159, PLN03159, cation/H(+) antiporter 15; Provisional Back     alignment and domain information 
 Score =  393 bits (1012), Expect = e-126
 Identities = 234/710 (32%), Positives = 383/710 (53%), Gaps = 47/710 (6%)

Query: 10  GYIFFMFLIGVKMDLSLITKLGKREWCISLSLMFNLLLVGM----ICQTISQILEPQEYL 65
           G ++F+FL+GV+MD+S+I + GK+   I+++ M     +G+    I   +S+ +    ++
Sbjct: 111 GLLYFLFLVGVEMDISVIRRTGKKALAIAIAGMALPFCIGLAFSFIFHQVSRNVHQGTFI 170

Query: 66  DDWIDLFTATTM-LTSFPVVACFLMHLKIINSELGHFALSTALLCDLQSVILVNSYNYMD 124
                LF    + +T+FPV+A  L  +K+IN+ELG  A+S AL+ D+ + IL+     + 
Sbjct: 171 -----LFLGVALSVTAFPVLARILAEIKLINTELGRIAMSAALVNDMCAWILLA----LA 221

Query: 125 IITNASIRVGIKAMALSLSLIVFVTI---VLRRLMFWIIRRTPEGKPVKSSYTIFIVCLV 181
           I    +    + ++ + LS + FV     V+R  ++WIIRRTPEG+     Y   I+  V
Sbjct: 222 IALAENDSTSLASLWVLLSSVAFVLFCFYVVRPGIWWIIRRTPEGETFSEFYICLILTGV 281

Query: 182 IVVAVVGETVGIQYFYGPFIFGLTVPTGPPLASTLVEKLDTIVTGLFLPLMATFCGLKSN 241
           ++   + + +G    +G F+FGL +P GP L  TL+EKL+  V+GL LPL     GLK+N
Sbjct: 282 MISGFITDAIGTHSVFGAFVFGLVIPNGP-LGVTLIEKLEDFVSGLLLPLFFAISGLKTN 340

Query: 242 LRDLSKGLSYP-LVFGMTIGLFFKLIAVYLPAVWFNTHSTDAAALSLILTVKGIVELGTF 300
           +  +    ++  LV  + +    K++   + A ++     +   L  ++  KG+VE+   
Sbjct: 341 VTKIQGPATWGLLVLVIIMASAGKIMGTIIIAFFYTMPFREGITLGFLMNTKGLVEMIVL 400

Query: 301 GTNFNKQVRNTGEFTVAVVLILILASIIPIIVRKLHDFSNTYPGYQQRNILHGASNDDLR 360
               +++V +   F V V++ + + ++I  +V  ++  +    GY++R I     + +LR
Sbjct: 401 NVGRDQEVLDDESFAVMVLVAVAMTALITPVVTVVYRPARRLVGYKRRTIQRSKHDAELR 460

Query: 361 ILVCTHRQDDALAGIRLLEISHPMKESPLSVYGLYLEPLTGGSTPLLINHQLGQKYSKSG 420
           +LVC H   +    I LLE SHP K SP+ +Y L+L  LTG ++ +LI H   +K  +  
Sbjct: 461 MLVCVHTPRNVPTIINLLEASHPTKRSPICIYVLHLVELTGRASAMLIVHN-TRKSGRPA 519

Query: 421 AHRQPII--HVFRYFKA--EHPKFVQVQVFSAISPPKVMHEDICWLAFDKSISLIILPCH 476
            +R      H+   F+   +H   V VQ  +AISP   MHED+C LA DK +SLII+P H
Sbjct: 520 LNRTQAQSDHIINAFENYEQHAGCVSVQPLTAISPYSTMHEDVCNLAEDKRVSLIIIPFH 579

Query: 477 RKWNAKGELISDSQVLRNLNSKVLHKAPSSVGILIDRSRIHGPSSIFVAPFVYRLAVLYM 536
           ++    G + + +   R +N  VL  AP SVGIL+DR  + G + +      + +AVL+ 
Sbjct: 580 KQQTVDGGMEATNPAFRGVNQNVLANAPCSVGILVDRG-LSGATRLASNQVSHHVAVLFF 638

Query: 537 GGEDDMEALAYARRMARSSRVHLTVIHFTLSKESGYARWTNT------------------ 578
           GG DD EALAYA RM+    + LTV+ F   +++                          
Sbjct: 639 GGPDDREALAYAWRMSEHPGITLTVMRFIPGEDAAPTASQPASSPSDPRIPTVETDGKKE 698

Query: 579 --IDDEFLNGLKKNDEILGNLNIIYKEEAVKDGSDTAMIIRSMEEKYDLVLVGRRRRSDS 636
             +D+E++N  +      GN +I+Y E+ V +G +T   IRSM+  +DL +VGR +   S
Sbjct: 699 RQLDEEYINEFRA--RNAGNESIVYTEKVVSNGEETVAAIRSMDSAHDLFIVGRGQGMIS 756

Query: 637 PFTLGLSEWCDLPELGPIGDLFASSDITASISILVIQQQIIRDEQNEALG 686
           P T GL++W + PELG IGDL ASSD  A++S+LV+QQ +    Q + LG
Sbjct: 757 PLTAGLTDWSECPELGAIGDLLASSDFAATVSVLVVQQYVGTGPQPDDLG 806

Length = 832
>gnl|CDD|216235 pfam00999, Na_H_Exchanger, Sodium/hydrogen exchanger family Back     alignment and domain information
>gnl|CDD|223551 COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|238182 cd00293, USP_Like, Usp: Universal stress protein family Back     alignment and domain information
>gnl|CDD|216006 pfam00582, Usp, Universal stress protein family Back     alignment and domain information
>gnl|CDD|233195 TIGR00932, 2a37, transporter, monovalent cation:proton antiporter-2 (CPA2) family Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 694
PLN03159832 cation/H(+) antiporter 15; Provisional 100.0
KOG1650769 consensus Predicted K+/H+-antiporter [Inorganic io 100.0
PRK10669558 putative cation:proton antiport protein; Provision 100.0
PRK03562621 glutathione-regulated potassium-efflux system prot 100.0
COG0475397 KefB Kef-type K+ transport systems, membrane compo 100.0
PRK03659601 glutathione-regulated potassium-efflux system prot 100.0
PRK05326562 potassium/proton antiporter; Reviewed 100.0
PF00999380 Na_H_Exchanger: Sodium/hydrogen exchanger family; 99.97
TIGR00932273 2a37 transporter, monovalent cation:proton antipor 99.97
COG4651408 RosB Kef-type K+ transport system, predicted NAD-b 99.96
TIGR00831525 a_cpa1 Na+/H+ antiporter, bacterial form. This mod 99.87
TIGR00844810 c_cpa1 na(+)/h(+) antiporter. This model is specif 99.86
COG0025429 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorg 99.78
TIGR00840559 b_cpa1 sodium/hydrogen exchanger 3. This model is 99.78
PRK14853423 nhaA pH-dependent sodium/proton antiporter; Provis 99.77
COG3263574 NhaP-type Na+/H+ and K+/H+ antiporters with a uniq 99.72
PRK11175305 universal stress protein UspE; Provisional 99.72
TIGR00773373 NhaA Na+/H+ antiporter NhaA. These proteins are me 99.59
cd01988132 Na_H_Antiporter_C The C-terminal domain of a subfa 99.45
PRK14856438 nhaA pH-dependent sodium/proton antiporter; Provis 99.25
KOG4505467 consensus Na+/H+ antiporter [Inorganic ion transpo 99.25
PRK09560389 nhaA pH-dependent sodium/proton antiporter; Review 99.25
KOG1965575 consensus Sodium/hydrogen exchanger protein [Inorg 99.2
PRK09561388 nhaA pH-dependent sodium/proton antiporter; Review 99.17
PRK14855423 nhaA pH-dependent sodium/proton antiporter; Provis 99.15
PRK14854383 nhaA pH-dependent sodium/proton antiporter; Provis 99.14
PRK15005144 universal stress protein F; Provisional 99.11
PRK15456142 universal stress protein UspG; Provisional 99.08
cd01989146 STK_N The N-terminal domain of Eukaryotic Serine T 99.03
cd01987124 USP_OKCHK USP domain is located between the N-term 98.98
PRK09982142 universal stress protein UspD; Provisional 98.97
PRK15118144 universal stress global response regulator UspA; P 98.96
PF06965378 Na_H_antiport_1: Na+/H+ antiporter 1; InterPro: IP 98.93
COG3004390 NhaA Na+/H+ antiporter [Inorganic ion transport an 98.86
PF00582140 Usp: Universal stress protein family; InterPro: IP 98.86
PRK10116142 universal stress protein UspC; Provisional 98.76
cd00293130 USP_Like Usp: Universal stress protein family. The 98.68
PRK11175305 universal stress protein UspE; Provisional 98.65
cd01989146 STK_N The N-terminal domain of Eukaryotic Serine T 98.38
cd01988132 Na_H_Antiporter_C The C-terminal domain of a subfa 98.32
PRK09982142 universal stress protein UspD; Provisional 98.24
PRK12460312 2-keto-3-deoxygluconate permease; Provisional 98.17
PF00582140 Usp: Universal stress protein family; InterPro: IP 98.14
PRK15005144 universal stress protein F; Provisional 98.12
COG0589154 UspA Universal stress protein UspA and related nuc 98.11
KOG1966670 consensus Sodium/hydrogen exchanger protein [Inorg 98.03
cd01987124 USP_OKCHK USP domain is located between the N-term 98.0
PRK15118144 universal stress global response regulator UspA; P 97.96
PRK10116142 universal stress protein UspC; Provisional 97.95
cd00293130 USP_Like Usp: Universal stress protein family. The 97.85
PRK15456142 universal stress protein UspG; Provisional 97.85
PF03812314 KdgT: 2-keto-3-deoxygluconate permease; InterPro: 97.84
PRK12652357 putative monovalent cation/H+ antiporter subunit E 97.55
TIGR00793314 kdgT 2-keto-3-deoxygluconate transporter. This fam 97.45
PRK12652 357 putative monovalent cation/H+ antiporter subunit E 97.33
COG0385319 Predicted Na+-dependent transporter [General funct 97.25
PRK05274326 2-keto-3-deoxygluconate permease; Provisional 96.95
PF05145318 AmoA: Putative ammonia monooxygenase; InterPro: IP 96.41
COG0589154 UspA Universal stress protein UspA and related nuc 96.27
PF05684378 DUF819: Protein of unknown function (DUF819); Inte 96.12
TIGR00932273 2a37 transporter, monovalent cation:proton antipor 96.11
PRK03562621 glutathione-regulated potassium-efflux system prot 96.03
PF03601305 Cons_hypoth698: Conserved hypothetical protein 698 95.93
PRK10490 895 sensor protein KdpD; Provisional 95.92
TIGR00783347 ccs citrate carrier protein, CCS family. These pro 95.9
COG3180352 AbrB Putative ammonia monooxygenase [General funct 95.82
PF13593313 DUF4137: SBF-like CPA transporter family (DUF4137) 95.81
COG2855334 Predicted membrane protein [Function unknown] 95.74
PRK10669558 putative cation:proton antiport protein; Provision 95.74
PF03390414 2HCT: 2-hydroxycarboxylate transporter family; Int 95.73
PF01758187 SBF: Sodium Bile acid symporter family; InterPro: 95.71
COG0798342 ACR3 Arsenite efflux pump ACR3 and related permeas 95.6
TIGR00841286 bass bile acid transporter. Functionally character 95.53
PRK03659601 glutathione-regulated potassium-efflux system prot 95.42
PRK05326562 potassium/proton antiporter; Reviewed 95.38
COG0475397 KefB Kef-type K+ transport systems, membrane compo 95.32
TIGR00832328 acr3 arsenical-resistance protein. The first prote 94.92
TIGR00698335 conserved hypothetical integral membrane protein. 94.58
TIGR00844 810 c_cpa1 na(+)/h(+) antiporter. This model is specif 94.42
COG3493438 CitS Na+/citrate symporter [Energy production and 93.99
PF03616368 Glt_symporter: Sodium/glutamate symporter; InterPr 93.92
TIGR03082156 Gneg_AbrB_dup membrane protein AbrB duplication. T 93.7
PF03956191 DUF340: Membrane protein of unknown function (DUF3 93.67
TIGR00831525 a_cpa1 Na+/H+ antiporter, bacterial form. This mod 93.34
PLN03159 832 cation/H(+) antiporter 15; Provisional 93.32
COG2205 890 KdpD Osmosensitive K+ channel histidine kinase [Si 93.27
cd0198486 AANH_like Adenine nucleotide alpha hydrolases supe 92.65
TIGR00698335 conserved hypothetical integral membrane protein. 92.58
PRK10490 895 sensor protein KdpD; Provisional 91.89
COG0786404 GltS Na+/glutamate symporter [Amino acid transport 91.03
TIGR00930953 2a30 K-Cl cotransporter. 90.58
PF03616368 Glt_symporter: Sodium/glutamate symporter; InterPr 90.22
COG1346230 LrgB Putative effector of murein hydrolase [Cell e 89.38
PF03977360 OAD_beta: Na+-transporting oxaloacetate decarboxyl 89.33
PF06826169 Asp-Al_Ex: Predicted Permease Membrane Region; Int 88.96
TIGR03136399 malonate_biotin Na+-transporting malonate decarbox 87.9
TIGR00210398 gltS sodium--glutamate symport carrier (gltS). 87.52
PRK04288232 antiholin-like protein LrgB; Provisional 87.35
PF03601305 Cons_hypoth698: Conserved hypothetical protein 698 86.2
COG2205 890 KdpD Osmosensitive K+ channel histidine kinase [Si 85.99
TIGR00210398 gltS sodium--glutamate symport carrier (gltS). 85.49
PF03956191 DUF340: Membrane protein of unknown function (DUF3 84.59
COG0025429 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorg 84.1
PF00999380 Na_H_Exchanger: Sodium/hydrogen exchanger family; 82.55
TIGR00659226 conserved hypothetical protein TIGR00659. Members 81.82
PRK10711231 hypothetical protein; Provisional 80.27
PRK15475433 oxaloacetate decarboxylase subunit beta; Provision 80.24
PRK15476433 oxaloacetate decarboxylase subunit beta; Provision 80.19
PRK15477433 oxaloacetate decarboxylase subunit beta; Provision 80.19
>PLN03159 cation/H(+) antiporter 15; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.4e-138  Score=1216.06  Aligned_cols=678  Identities=34%  Similarity=0.594  Sum_probs=611.7

Q ss_pred             hhHHHHHHHHHHHHHHHhhccChHHHHhcchhHHHHHHHHHHHHHHHH-HHHHHHhhhcccCCCchhHHHHHHHHHhhcc
Q 038780            2 NLYSLTIFGYIFFMFLIGVKMDLSLITKLGKREWCISLSLMFNLLLVG-MICQTISQILEPQEYLDDWIDLFTATTMLTS   80 (694)
Q Consensus         2 ~l~~la~~G~i~llF~~Gle~d~~~l~~~~~~~~~i~~~~~~~p~~~g-~~~~~l~~~~~~~~~~~~~~l~ig~~ls~Ts   80 (694)
                      .+++++++|++|+||++|+|+|++.+||++|+++.+|+.++++|+++| .++++++.. ..........+++|+++|.||
T Consensus       103 ~l~~la~lGlillmFliGLE~Dl~~lr~~~k~a~~ia~~~~ilpf~lg~~~~~~l~~~-~~~~~~~~~~l~~g~alS~Ts  181 (832)
T PLN03159        103 VLETMANLGLLYFLFLVGVEMDISVIRRTGKKALAIAIAGMALPFCIGLAFSFIFHQV-SRNVHQGTFILFLGVALSVTA  181 (832)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCcHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccccchhHHHHHHHHHHHHhh
Confidence            588999999999999999999999999999999999999999999999 877776432 111122456799999999999


Q ss_pred             HHHHHHHHHhcccccChhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 038780           81 FPVVACFLMHLKIINSELGHFALSTALLCDLQSVILVNSYNYMDIITNASIRVGIKAMALSLSLIVFVTIVLRRLMFWII  160 (694)
Q Consensus        81 ~~vv~~iL~el~~~~s~~g~lals~a~i~Di~~~ill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~~~~~~  160 (694)
                      +|+++++|+|+|+++|+.||+++++++++|+++|++++++.++...+ .+...++|.++..++|++++++++||++.|+.
T Consensus       182 ~pVv~riL~Elkll~s~~GrlaLsaavv~Dl~~~ilLav~~~l~~~~-~~~~~~l~~~l~~~~f~~~~~~v~r~~~~~~~  260 (832)
T PLN03159        182 FPVLARILAEIKLINTELGRIAMSAALVNDMCAWILLALAIALAEND-STSLASLWVLLSSVAFVLFCFYVVRPGIWWII  260 (832)
T ss_pred             HHHHHHHHHHcCcccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999998887665432 22334667777788888899999999999999


Q ss_pred             HHCCCCCCCCchHHHHHHHHHHHHHHHHHHhchhhhHHHHhhhhcccCCCCchhHHHHHHhhhhhhhhhhHHHhhhcccc
Q 038780          161 RRTPEGKPVKSSYTIFIVCLVIVVAVVGETVGIQYFYGPFIFGLTVPTGPPLASTLVEKLDTIVTGLFLPLMATFCGLKS  240 (694)
Q Consensus       161 ~~~~~~~~~~e~~~~~il~~~l~~~~~ae~~g~~~~lGaf~~GL~i~~~~p~~~~l~~kl~~~~~~~f~PlFF~~~Gl~~  240 (694)
                      |+++++++.+|.++.+++++++++++++|.+|+|+++|||++|+++|+. |+++.+.+|++++++++|+|+||+++||++
T Consensus       261 r~~~~~~~~~e~~v~~il~~vl~~a~lae~~Gl~~ilGAFlaGl~lp~~-~~~~~l~ekle~~~~~lflPlFFv~vGl~i  339 (832)
T PLN03159        261 RRTPEGETFSEFYICLILTGVMISGFITDAIGTHSVFGAFVFGLVIPNG-PLGVTLIEKLEDFVSGLLLPLFFAISGLKT  339 (832)
T ss_pred             HhCcCCCCcccchhHHHHHHHHHHHHHHHHhCccHHHHHHHHhhccCCc-chHHHHHHHHHHHHHHHHHHHHHHHhhhee
Confidence            9999988889999999999999999999999999999999999999984 899999999999999999999999999999


Q ss_pred             cccccccCCchh-HHHHHHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHhhhhhhhhhhhhccccccCCCChhhHHHHHH
Q 038780          241 NLRDLSKGLSYP-LVFGMTIGLFFKLIAVYLPAVWFNTHSTDAAALSLILTVKGIVELGTFGTNFNKQVRNTGEFTVAVV  319 (694)
Q Consensus       241 dl~~l~~~~~~~-~~~ii~~~~~~K~~~~~l~~~~~~~~~~~~~~lg~~m~~kG~~~li~~~~~~~~~~i~~~~f~~lv~  319 (694)
                      |+..+.....|. +++++++++++|+++++++++++|+|++|++.+|++||+||+++++++++|++.|+++++.|+++++
T Consensus       340 dl~~l~~~~~~~~~~~liv~a~~gK~~g~~l~a~~~g~~~~eal~lG~lm~~kG~~~Lii~~ig~~~gvi~~~~f~~lVl  419 (832)
T PLN03159        340 NVTKIQGPATWGLLVLVIIMASAGKIMGTIIIAFFYTMPFREGITLGFLMNTKGLVEMIVLNVGRDQEVLDDESFAVMVL  419 (832)
T ss_pred             eHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHhcccHHHHHHHHHHHhcCccCchhhhHHHH
Confidence            998886544455 5667778899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhccccCCCCCcccccccCCCCCCCceEEEEeecCCChHHHHHHHHhhCCCCCCCcEEEEEEeecc
Q 038780          320 LILILASIIPIIVRKLHDFSNTYPGYQQRNILHGASNDDLRILVCTHRQDDALAGIRLLEISHPMKESPLSVYGLYLEPL  399 (694)
Q Consensus       320 ~~lltt~i~~~l~~~l~~p~~~~~~~~~r~i~~~~~~~~lrILv~v~~~~~~~~ll~l~~~~~~~~~~p~~v~~Lhlvel  399 (694)
                      +++++|.+.+|++.++|||+|||..|++|++|+.++++|+|||+|+|++|+++++++|++++++++++|.++|++||+||
T Consensus       420 ~avl~T~i~~Plv~~ly~p~rk~~~~~~r~i~~~~~~~elriL~cv~~~~~v~~li~Lle~s~~t~~sp~~vy~lhLveL  499 (832)
T PLN03159        420 VAVAMTALITPVVTVVYRPARRLVGYKRRTIQRSKHDAELRMLVCVHTPRNVPTIINLLEASHPTKRSPICIYVLHLVEL  499 (832)
T ss_pred             HHHHHHHHHHHHHHHHhCHHhhhccccccccccCCCCCceeEEEEeccCCcHHHHHHHHHhcCCCCCCCceEEEEEEEee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcchhhccccccCCC----CCCCCchhHHHHHHHHhHhCCCceEEEEEEEEcCCCCchHHHHHHHHhcCccEEEecC
Q 038780          400 TGGSTPLLINHQLGQKYS----KSGAHRQPIIHVFRYFKAEHPKFVQVQVFSAISPPKVMHEDICWLAFDKSISLIILPC  475 (694)
Q Consensus       400 ~~~~~~~~~~~~~~~~~~----~~~~~~~~i~~af~~~~~~~~~~v~v~~~t~vs~~~~m~~~I~~~A~e~~~~lIilp~  475 (694)
                      ++|++|.+++|+.+++..    +...++|+++++|+.|++++ ++|+|+++|++|||++||+|||++|+|+++|+||+||
T Consensus       500 ~~r~~~~l~~h~~~~~~~~~~~~~~~~~~~i~~af~~~~~~~-~~v~v~~~t~vs~~~~mh~dIc~~A~d~~~slIilpf  578 (832)
T PLN03159        500 TGRASAMLIVHNTRKSGRPALNRTQAQSDHIINAFENYEQHA-GCVSVQPLTAISPYSTMHEDVCNLAEDKRVSLIIIPF  578 (832)
T ss_pred             cCCCccceeeeecccccccccccccccccHHHHHHHHHHhhc-CceEEEEEEEEeCcccHHHHHHHHHHhcCCCEEEECC
Confidence            999999999998754321    12355899999999999864 5899999999999999999999999999999999999


Q ss_pred             ccccCCCCccccchhHHHHHHHHHhhhCCCcEEEEecCCCCCCCCccccCCceeEEEEeccCCcchHHHHHHHHHHHhCC
Q 038780          476 HRKWNAKGELISDSQVLRNLNSKVLHKAPSSVGILIDRSRIHGPSSIFVAPFVYRLAVLYMGGEDDMEALAYARRMARSS  555 (694)
Q Consensus       476 h~~~~~dg~~~~~~~~~r~~n~~Vl~~ApcsVgIlvdr~~~~~~~~~~~~~~~~~I~~~f~gg~ddreAl~~a~rma~~~  555 (694)
                      ||+|+.||++++++..+|++|+|||++|||||||+||||.. +..+.+.....+||+++|+|||||||||+||+|||+||
T Consensus       579 hk~~~~dg~~~~~~~~~r~~n~~VL~~ApCsVgIlVDRg~~-~~~~~~~~~~~~~v~~~F~GG~DDREALa~a~rma~~p  657 (832)
T PLN03159        579 HKQQTVDGGMEATNPAFRGVNQNVLANAPCSVGILVDRGLS-GATRLASNQVSHHVAVLFFGGPDDREALAYAWRMSEHP  657 (832)
T ss_pred             CCccCCCCCccccCchHHHHHHHHHccCCCCEEEEEeCCCC-ccccccccccceeEEEEecCCcchHHHHHHHHHHhcCC
Confidence            99999999999889999999999999999999999999963 12112234457899999999999999999999999999


Q ss_pred             CeEEEEEEEeecCCcCc--------------------cccccchHHHHHHHhhhcccccCCCcEEEEEEEecCchHHHHH
Q 038780          556 RVHLTVIHFTLSKESGY--------------------ARWTNTIDDEFLNGLKKNDEILGNLNIIYKEEAVKDGSDTAMI  615 (694)
Q Consensus       556 ~v~ltv~~~~~~~~~~~--------------------~~~e~~~d~~~i~~~~~~~~~~~~~~v~y~e~~v~~g~~~~~~  615 (694)
                      ++++||+||+++++..+                    +++|+++|+++++||+.++.  .++++.|.|+.|+||+|+++.
T Consensus       658 ~v~lTVirf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~D~~~~~ef~~~~~--~~~~v~y~E~~V~~~~e~~~~  735 (832)
T PLN03159        658 GITLTVMRFIPGEDAAPTASQPASSPSDPRIPTVETDGKKERQLDEEYINEFRARNA--GNESIVYTEKVVSNGEETVAA  735 (832)
T ss_pred             CeEEEEEEEEcccccccccccccccccccccccccccchhHHHHHHHHHHHHHHhcC--CCCceEEEEEecCCHHHHHHH
Confidence            99999999986532211                    34577899999999999876  568899999999999999999


Q ss_pred             HHhhhcCCcEEEEcccCCCCCccccCCCCCCCCCccchhhhhhhcCCCCCceeEEEEeeecccCCcchhcc
Q 038780          616 IRSMEEKYDLVLVGRRRRSDSPFTLGLSEWCDLPELGPIGDLFASSDITASISILVIQQQIIRDEQNEALG  686 (694)
Q Consensus       616 i~~~~~~~DLiiVG~~~~~~s~~~~gl~~w~e~~eLG~igd~las~~~~~~~SvLvvqq~~~~~~~~~~~~  686 (694)
                      +|++.++|||+||||+|+.+|++|+||+||+||||||+|||+|||+||++++||||||||..+..+..++|
T Consensus       736 l~~~~~~ydL~iVGr~~~~~~~~~~gL~~w~e~pELG~iGD~LaS~d~~~~~SVLVvQQ~~~~~~~~~~~~  806 (832)
T PLN03159        736 IRSMDSAHDLFIVGRGQGMISPLTAGLTDWSECPELGAIGDLLASSDFAATVSVLVVQQYVGTGPQPDDLG  806 (832)
T ss_pred             HHHhhccCcEEEEecCCCCCcchhccccccccCCccchhhhHHhcCCCCCceeEEEEEeeccCCCCcccCC
Confidence            99999999999999999888999999999999999999999999999999999999999997655554444

>KOG1650 consensus Predicted K+/H+-antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK10669 putative cation:proton antiport protein; Provisional Back     alignment and domain information
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information
>COG0475 KefB Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional Back     alignment and domain information
>PRK05326 potassium/proton antiporter; Reviewed Back     alignment and domain information
>PF00999 Na_H_Exchanger: Sodium/hydrogen exchanger family; InterPro: IPR006153 Sodium proton exchangers (NHEs) constitute a large family of integral membrane protein transporters that are responsible for the counter-transport of protons and sodium ions across lipid bilayers [, ] Back     alignment and domain information
>TIGR00932 2a37 transporter, monovalent cation:proton antiporter-2 (CPA2) family Back     alignment and domain information
>COG4651 RosB Kef-type K+ transport system, predicted NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00831 a_cpa1 Na+/H+ antiporter, bacterial form Back     alignment and domain information
>TIGR00844 c_cpa1 na(+)/h(+) antiporter Back     alignment and domain information
>COG0025 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00840 b_cpa1 sodium/hydrogen exchanger 3 Back     alignment and domain information
>PRK14853 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK11175 universal stress protein UspE; Provisional Back     alignment and domain information
>TIGR00773 NhaA Na+/H+ antiporter NhaA Back     alignment and domain information
>cd01988 Na_H_Antiporter_C The C-terminal domain of a subfamily of Na+ /H+ antiporter existed in bacteria and archea Back     alignment and domain information
>PRK14856 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>KOG4505 consensus Na+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK09560 nhaA pH-dependent sodium/proton antiporter; Reviewed Back     alignment and domain information
>KOG1965 consensus Sodium/hydrogen exchanger protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK09561 nhaA pH-dependent sodium/proton antiporter; Reviewed Back     alignment and domain information
>PRK14855 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>PRK14854 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>PRK15005 universal stress protein F; Provisional Back     alignment and domain information
>PRK15456 universal stress protein UspG; Provisional Back     alignment and domain information
>cd01989 STK_N The N-terminal domain of Eukaryotic Serine Threonine kinases Back     alignment and domain information
>cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family Back     alignment and domain information
>PRK09982 universal stress protein UspD; Provisional Back     alignment and domain information
>PRK15118 universal stress global response regulator UspA; Provisional Back     alignment and domain information
>PF06965 Na_H_antiport_1: Na+/H+ antiporter 1; InterPro: IPR004670 NhaA is a sodium ion/proton antiporter that uses the proton electrochemical gradient to expel sodium ions from the cytoplasm and functions primarily in the adaptation to high salinity at alkaline pH Back     alignment and domain information
>COG3004 NhaA Na+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF00582 Usp: Universal stress protein family; InterPro: IPR006016 The universal stress protein UspA P28242 from SWISSPROT [] is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents Back     alignment and domain information
>PRK10116 universal stress protein UspC; Provisional Back     alignment and domain information
>cd00293 USP_Like Usp: Universal stress protein family Back     alignment and domain information
>PRK11175 universal stress protein UspE; Provisional Back     alignment and domain information
>cd01989 STK_N The N-terminal domain of Eukaryotic Serine Threonine kinases Back     alignment and domain information
>cd01988 Na_H_Antiporter_C The C-terminal domain of a subfamily of Na+ /H+ antiporter existed in bacteria and archea Back     alignment and domain information
>PRK09982 universal stress protein UspD; Provisional Back     alignment and domain information
>PRK12460 2-keto-3-deoxygluconate permease; Provisional Back     alignment and domain information
>PF00582 Usp: Universal stress protein family; InterPro: IPR006016 The universal stress protein UspA P28242 from SWISSPROT [] is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents Back     alignment and domain information
>PRK15005 universal stress protein F; Provisional Back     alignment and domain information
>COG0589 UspA Universal stress protein UspA and related nucleotide-binding proteins [Signal transduction mechanisms] Back     alignment and domain information
>KOG1966 consensus Sodium/hydrogen exchanger protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family Back     alignment and domain information
>PRK15118 universal stress global response regulator UspA; Provisional Back     alignment and domain information
>PRK10116 universal stress protein UspC; Provisional Back     alignment and domain information
>cd00293 USP_Like Usp: Universal stress protein family Back     alignment and domain information
>PRK15456 universal stress protein UspG; Provisional Back     alignment and domain information
>PF03812 KdgT: 2-keto-3-deoxygluconate permease; InterPro: IPR004684 This family includes the characterised 2-Keto-3-Deoxygluconate transporters from Bacillus subtilis and Erwinia chrysanthemi Back     alignment and domain information
>PRK12652 putative monovalent cation/H+ antiporter subunit E; Reviewed Back     alignment and domain information
>TIGR00793 kdgT 2-keto-3-deoxygluconate transporter Back     alignment and domain information
>PRK12652 putative monovalent cation/H+ antiporter subunit E; Reviewed Back     alignment and domain information
>COG0385 Predicted Na+-dependent transporter [General function prediction only] Back     alignment and domain information
>PRK05274 2-keto-3-deoxygluconate permease; Provisional Back     alignment and domain information
>PF05145 AmoA: Putative ammonia monooxygenase; InterPro: IPR007820 This family contains sequences annotated as ammonia monooxygenase Back     alignment and domain information
>COG0589 UspA Universal stress protein UspA and related nucleotide-binding proteins [Signal transduction mechanisms] Back     alignment and domain information
>PF05684 DUF819: Protein of unknown function (DUF819); InterPro: IPR008537 This family contains proteins of unknown function from archaeal, bacterial and plant species Back     alignment and domain information
>TIGR00932 2a37 transporter, monovalent cation:proton antiporter-2 (CPA2) family Back     alignment and domain information
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information
>PF03601 Cons_hypoth698: Conserved hypothetical protein 698; InterPro: IPR018383 This entry represents a family of uncharacterised multi-pass membrane proteins Back     alignment and domain information
>PRK10490 sensor protein KdpD; Provisional Back     alignment and domain information
>TIGR00783 ccs citrate carrier protein, CCS family Back     alignment and domain information
>COG3180 AbrB Putative ammonia monooxygenase [General function prediction only] Back     alignment and domain information
>PF13593 DUF4137: SBF-like CPA transporter family (DUF4137) Back     alignment and domain information
>COG2855 Predicted membrane protein [Function unknown] Back     alignment and domain information
>PRK10669 putative cation:proton antiport protein; Provisional Back     alignment and domain information
>PF03390 2HCT: 2-hydroxycarboxylate transporter family; InterPro: IPR004679 The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom Back     alignment and domain information
>PF01758 SBF: Sodium Bile acid symporter family; InterPro: IPR002657 This family of proteins are found both in prokaryotes and eukaryotes Back     alignment and domain information
>COG0798 ACR3 Arsenite efflux pump ACR3 and related permeases [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00841 bass bile acid transporter Back     alignment and domain information
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional Back     alignment and domain information
>PRK05326 potassium/proton antiporter; Reviewed Back     alignment and domain information
>COG0475 KefB Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00832 acr3 arsenical-resistance protein Back     alignment and domain information
>TIGR00698 conserved hypothetical integral membrane protein Back     alignment and domain information
>TIGR00844 c_cpa1 na(+)/h(+) antiporter Back     alignment and domain information
>COG3493 CitS Na+/citrate symporter [Energy production and conversion] Back     alignment and domain information
>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate Back     alignment and domain information
>TIGR03082 Gneg_AbrB_dup membrane protein AbrB duplication Back     alignment and domain information
>PF03956 DUF340: Membrane protein of unknown function (DUF340); InterPro: IPR005642 Members of this family contain a conserved core of four predicted transmembrane segments Back     alignment and domain information
>TIGR00831 a_cpa1 Na+/H+ antiporter, bacterial form Back     alignment and domain information
>PLN03159 cation/H(+) antiporter 15; Provisional Back     alignment and domain information
>COG2205 KdpD Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms] Back     alignment and domain information
>cd01984 AANH_like Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases Universal Stress Response protein and electron transfer flavoprotein (ETF) Back     alignment and domain information
>TIGR00698 conserved hypothetical integral membrane protein Back     alignment and domain information
>PRK10490 sensor protein KdpD; Provisional Back     alignment and domain information
>COG0786 GltS Na+/glutamate symporter [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR00930 2a30 K-Cl cotransporter Back     alignment and domain information
>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate Back     alignment and domain information
>COG1346 LrgB Putative effector of murein hydrolase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF03977 OAD_beta: Na+-transporting oxaloacetate decarboxylase beta subunit; InterPro: IPR005661 Members of this family are integral membrane proteins Back     alignment and domain information
>PF06826 Asp-Al_Ex: Predicted Permease Membrane Region; InterPro: IPR006512 These sequences contain a domain that is duplicated in HI0035 of Haemophilus influenzae, in YidE and YbjL of Escherichia coli, and in a number of other putative transporters Back     alignment and domain information
>TIGR03136 malonate_biotin Na+-transporting malonate decarboxylase, carboxybiotin decarboxylase subunit Back     alignment and domain information
>TIGR00210 gltS sodium--glutamate symport carrier (gltS) Back     alignment and domain information
>PRK04288 antiholin-like protein LrgB; Provisional Back     alignment and domain information
>PF03601 Cons_hypoth698: Conserved hypothetical protein 698; InterPro: IPR018383 This entry represents a family of uncharacterised multi-pass membrane proteins Back     alignment and domain information
>COG2205 KdpD Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms] Back     alignment and domain information
>TIGR00210 gltS sodium--glutamate symport carrier (gltS) Back     alignment and domain information
>PF03956 DUF340: Membrane protein of unknown function (DUF340); InterPro: IPR005642 Members of this family contain a conserved core of four predicted transmembrane segments Back     alignment and domain information
>COG0025 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF00999 Na_H_Exchanger: Sodium/hydrogen exchanger family; InterPro: IPR006153 Sodium proton exchangers (NHEs) constitute a large family of integral membrane protein transporters that are responsible for the counter-transport of protons and sodium ions across lipid bilayers [, ] Back     alignment and domain information
>TIGR00659 conserved hypothetical protein TIGR00659 Back     alignment and domain information
>PRK10711 hypothetical protein; Provisional Back     alignment and domain information
>PRK15475 oxaloacetate decarboxylase subunit beta; Provisional Back     alignment and domain information
>PRK15476 oxaloacetate decarboxylase subunit beta; Provisional Back     alignment and domain information
>PRK15477 oxaloacetate decarboxylase subunit beta; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query694
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 60.6 bits (146), Expect = 1e-09
 Identities = 79/559 (14%), Positives = 159/559 (28%), Gaps = 164/559 (29%)

Query: 154 RLMFWIIRRTPEGKPVKSSYTIFIVCLVIVVAVVGETVGIQYFYGPFIFGL--TVPTGPP 211
             +FW +    E          F          V E + I Y    F+     T    P 
Sbjct: 65  LRLFWTLLSKQE-----EMVQKF----------VEEVLRINY---KFLMSPIKTEQRQPS 106

Query: 212 LASTL-VEKLDTIVTG--LFLPLMAT----FCGLKSNLRDLSKGLSYPLVFGMT-IGLFF 263
           + + + +E+ D +     +F     +    +  L+  L +L       L+ G+   G   
Sbjct: 107 MMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPA-KNVLIDGVLGSG--- 162

Query: 264 KLIAVYLPAVWFNTHSTDAAALSLILTVKGIVELGTFGTNFNKQVRNTGEFTVAVVLILI 323
           K              +  A  + L   V+  ++   F  N                ++ +
Sbjct: 163 K--------------TWVALDVCLSYKVQCKMDFKIFWLNL-------KNCNSPETVLEM 201

Query: 324 LASIIPIIVRKLHDFSNTYPGYQQ---------RNILHGASN-------DDL-------- 359
           L  ++  I       S+     +          R +L             ++        
Sbjct: 202 LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNA 261

Query: 360 -----RILVCTHRQD--DALAG-----IRLLEISHPM--KESPLSVYGLYLE------P- 398
                +IL+ T  +   D L+      I L   S  +   E   S+   YL+      P 
Sbjct: 262 FNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEV-KSLLLKYLDCRPQDLPR 320

Query: 399 -LTGGSTPLLINHQLGQKYSKSGAHRQPIIHVFRY---------FKAEHPK-----FVQV 443
            +   + P  ++  + +      A      HV                 P      F ++
Sbjct: 321 EVLTTN-PRRLS-IIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRL 378

Query: 444 QVF---SAISPPKVMHEDICWLAFDKSISLIIL-PCHR-----KWNAKGEL-ISDSQV-- 491
            VF   + I P  ++   + W    KS  ++++   H+     K   +  + I    +  
Sbjct: 379 SVFPPSAHI-PTILL--SLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLEL 435

Query: 492 -LRNLNSKVLHKAPSSVGILIDRSRI------HGPSSIFVAPFVYRLAVLYMGGEDDMEA 544
            ++  N   LH+       ++D   I            ++  + Y     ++G    ++ 
Sbjct: 436 KVKLENEYALHR------SIVDHYNIPKTFDSDDLIPPYLDQYFYS----HIG--HHLKN 483

Query: 545 LAYARRMARSSRVHLTVIHFTLSK--ESGYARWTNTIDDEFLNGLKKNDEILGNLNIIYK 602
           + +  RM     V L    F   K      A   +      L  LK            YK
Sbjct: 484 IEHPERMTLFRMVFLD-FRFLEQKIRHDSTAWNASGSILNTLQQLKF-----------YK 531

Query: 603 EEAVKDGSDTAMIIRSMEE 621
                +      ++ ++ +
Sbjct: 532 PYICDNDPKYERLVNAILD 550
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query694
1zcd_A388 Na(+)/H(+) antiporter 1; membrane protein; 3.45A { 99.92
3mt0_A290 Uncharacterized protein PA1789; structural genomic 99.77
3olq_A319 Universal stress protein E; structural genomics, P 99.71
3loq_A294 Universal stress protein; structural genomics, PSI 99.7
3cis_A309 Uncharacterized protein; alpha/beta hydrolase, ATP 99.67
3ab8_A268 Putative uncharacterized protein TTHA0350; tandem- 99.65
3fdx_A143 Putative filament protein / universal stress PROT; 99.12
3dlo_A155 Universal stress protein; unknown function, struct 99.08
3hgm_A147 Universal stress protein TEAD; rossman fold, signa 99.05
3s3t_A146 Nucleotide-binding protein, universal stress PROT 99.05
1mjh_A162 Protein (ATP-binding domain of protein MJ0577); hy 99.05
3tnj_A150 Universal stress protein (USP); structural genomic 99.03
2dum_A170 Hypothetical protein PH0823; conserved hypothetica 99.01
1tq8_A163 Hypothetical protein RV1636; MTCY01B2.28, structur 99.0
2z08_A137 Universal stress protein family; uncharacterized c 98.98
2gm3_A175 Unknown protein; AT3G01520, putative ethylene-resp 98.96
3idf_A138 USP-like protein; universal, stress, PSI, MCSG, st 98.95
3fg9_A156 Protein of universal stress protein USPA family; A 98.94
1jmv_A141 USPA, universal stress protein A; chaperone; 1.85A 98.85
1q77_A138 Hypothetical protein AQ_178; structural genomics, 98.72
3mt0_A290 Uncharacterized protein PA1789; structural genomic 98.51
3loq_A294 Universal stress protein; structural genomics, PSI 98.45
3olq_A319 Universal stress protein E; structural genomics, P 98.4
3s3t_A146 Nucleotide-binding protein, universal stress PROT 98.32
3idf_A138 USP-like protein; universal, stress, PSI, MCSG, st 98.28
3tnj_A150 Universal stress protein (USP); structural genomic 98.25
3hgm_A147 Universal stress protein TEAD; rossman fold, signa 98.21
2z08_A137 Universal stress protein family; uncharacterized c 98.18
3cis_A309 Uncharacterized protein; alpha/beta hydrolase, ATP 98.18
1jmv_A141 USPA, universal stress protein A; chaperone; 1.85A 98.16
3fdx_A143 Putative filament protein / universal stress PROT; 98.16
1tq8_A163 Hypothetical protein RV1636; MTCY01B2.28, structur 98.12
3dlo_A155 Universal stress protein; unknown function, struct 98.11
2dum_A170 Hypothetical protein PH0823; conserved hypothetica 98.1
1mjh_A162 Protein (ATP-binding domain of protein MJ0577); hy 98.08
3fg9_A156 Protein of universal stress protein USPA family; A 98.07
3ab8_A268 Putative uncharacterized protein TTHA0350; tandem- 97.86
1q77_A138 Hypothetical protein AQ_178; structural genomics, 97.83
2gm3_A175 Unknown protein; AT3G01520, putative ethylene-resp 97.73
3zux_A332 Transporter, ASBTNM; transport protein, membrane p 97.35
3g40_A294 Na-K-CL cotransporter; alpha/beta fold 10-stranded 96.36
>1zcd_A Na(+)/H(+) antiporter 1; membrane protein; 3.45A {Escherichia coli} PDB: 3fi1_A Back     alignment and structure
Probab=99.92  E-value=7e-26  Score=240.55  Aligned_cols=299  Identities=15%  Similarity=0.052  Sum_probs=217.3

Q ss_pred             HHHHHHHHHHHHHHHhhccChHHH----Hhcch--hHHHHHHHHHHHHHHHH-HHHHHHhhhcccCCCchhHHHHHHHHH
Q 038780            4 YSLTIFGYIFFMFLIGVKMDLSLI----TKLGK--REWCISLSLMFNLLLVG-MICQTISQILEPQEYLDDWIDLFTATT   76 (694)
Q Consensus         4 ~~la~~G~i~llF~~Gle~d~~~l----~~~~~--~~~~i~~~~~~~p~~~g-~~~~~l~~~~~~~~~~~~~~l~ig~~l   76 (694)
                      .-+.+-.+.++||.+|+|+|.+.+    ++.+|  .+...++.|+++|++++ .+    ..       ....+.....+.
T Consensus        61 ~windglm~lFff~vGLEik~e~l~G~L~~~~~a~~p~~aAlgGmivP~~iy~~~----~~-------~~~~~~~gw~ip  129 (388)
T 1zcd_A           61 LWINDALMAVFFLLVGLEVKRELMQGSLASLRQAAFPVIAAIGGMIVPALLYLAF----NY-------ADPITREGWAIP  129 (388)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHSTTTSSTTTSHHHHHHHHHHTTTTHHHHGGG----CC-------SSTTHHHHTSSS
T ss_pred             HHHhhHhHHHHHHHHHHHhhHHHhcchhhhhhhHHHHHHHHHHHHHHHHHHHHHH----hc-------CChhhhhhhHHH
Confidence            345677899999999999999987    55444  37888999999999876 32    11       122344555556


Q ss_pred             hhccHHHHHHHHHhcccc-cChhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 038780           77 MLTSFPVVACFLMHLKII-NSELGHFALSTALLCDLQSVILVNSYNYMDIITNASIRVGIKAMALSLSLIVFVTIVLRRL  155 (694)
Q Consensus        77 s~Ts~~vv~~iL~el~~~-~s~~g~lals~a~i~Di~~~ill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~  155 (694)
                      +.|+.+....++..++.. .+..++.+++.|++||+.+|++++++++    +..+   ..+.. ..+++++..       
T Consensus       130 ~ATdIAfal~vL~~lg~~~p~~l~~flLalAvvDDl~aiivIAvfyt----~~~~---~~~l~-~~~~~~~~~-------  194 (388)
T 1zcd_A          130 AATDIAFALGVLALLGSRVPLALKIFLMALAIIDDLGAIIIIALFYT----NDLS---MASLG-VAAVAIAVL-------  194 (388)
T ss_dssp             SCCCHHHHHHHHHSSCSSSCSSSHHHHHHHHHHHHHHHHHHHHHHSC----CCCC---HHHHH-HHHHHHHHH-------
T ss_pred             HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHHc----CCcc---HHHHH-HHHHHHHHH-------
Confidence            678888888999998764 4556699999999999999999998864    1112   11211 122222212       


Q ss_pred             HHHHHHHCCCCCCCCchHHHHHHHHHHHHHHHHHHhchhhhHHHHhhhhcccCCC----CchhHHHHHHhhhhhhhhhhH
Q 038780          156 MFWIIRRTPEGKPVKSSYTIFIVCLVIVVAVVGETVGIQYFYGPFIFGLTVPTGP----PLASTLVEKLDTIVTGLFLPL  231 (694)
Q Consensus       156 ~~~~~~~~~~~~~~~e~~~~~il~~~l~~~~~ae~~g~~~~lGaf~~GL~i~~~~----p~~~~l~~kl~~~~~~~f~Pl  231 (694)
                        +..+|..    ++....+.++ . +++.+.++..|+|+++|+|++|+++|..+    +..++++++++++++.+++|+
T Consensus       195 --~~l~r~~----v~~~~~y~~l-g-l~~w~~~~~sGvHatigg~l~Gl~ip~~~~~~~~~~~~le~~l~p~v~~~ilPl  266 (388)
T 1zcd_A          195 --AVLNLCG----ARRTGVYILV-G-VVLWTAVLKSGVHATLAGVIVGFFIPLKEKHGRSPAKRLEHVLHPWVAYLILPL  266 (388)
T ss_dssp             --HHHHHTT----CCCTHHHHHH-H-HHHHHHTTTSHHHHHHHHHHHHHHSCCCGGGSSCHHHHHHHHHHHHHHHTHHHH
T ss_pred             --HHHHHhc----chhHHHHHHH-H-HHHHHHHHHhCccHHHHHHHHHHhccCCCccCCCHHHHHHHHHHHHHHHHHHHH
Confidence              2223322    1223333333 2 25567779999999999999999999863    357889999999999999999


Q ss_pred             H-HhhhcccccccccccCCchhHHHHHHHHHHHHHHHHHHHHHhh----------CCChhHHHHHHHHhhhhhhhhhhhh
Q 038780          232 M-ATFCGLKSNLRDLSKGLSYPLVFGMTIGLFFKLIAVYLPAVWF----------NTHSTDAAALSLILTVKGIVELGTF  300 (694)
Q Consensus       232 F-F~~~Gl~~dl~~l~~~~~~~~~~ii~~~~~~K~~~~~l~~~~~----------~~~~~~~~~lg~~m~~kG~~~li~~  300 (694)
                      | |+..|+++|...+..........+++..+++|.+|++..++..          |++|+|+..+|.+++.+++++++++
T Consensus       267 FaFanaGv~l~~~~~~~l~~~~~lgi~~glvvGK~~Gi~~~~~l~~rl~~~~lp~g~~~~~~~~vg~L~gigftmsL~Ia  346 (388)
T 1zcd_A          267 FAFANAGVSLQGVTLDGLTSILPLGIIAGLLIGKPLGISLFCWLALRLKLAHLPEGTTYQQIMVVGILCGIGFTMSIFIA  346 (388)
T ss_dssp             HHHHHCCCCCSSSCCCTHHHHSSTTTTHHHHHTTGGGSTTHHHHTSSCTTTCCCCSCCGGGGTTHHHHTTCCHHHHHHHH
T ss_pred             HHHHhcCeeecccchhhccChHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcCCCCCCHHHHHHHHHHhccchHHHHHHH
Confidence            9 9999999997432111011122344555889999855555554          9999999999999999999999999


Q ss_pred             ccccccCC--CChhhHHHHHHHHHHHHHHHHHHHHhhc
Q 038780          301 GTNFNKQV--RNTGEFTVAVVLILILASIIPIIVRKLH  336 (694)
Q Consensus       301 ~~~~~~~~--i~~~~f~~lv~~~lltt~i~~~l~~~l~  336 (694)
                      +++++.+.  +.++.+..++++++++++++|.++++.+
T Consensus       347 ~laf~~~~~~~~~~ak~~il~~s~~s~i~g~~~L~~~~  384 (388)
T 1zcd_A          347 SLAFGSVDPELINWAKLGILVGSISSAVIGYSWLRVRL  384 (388)
T ss_dssp             HHHSTTSSCSSHHHHHHHHHHHHHTTTSTTTGGGTTTC
T ss_pred             HHhccCCchhhHhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            99998876  3567799999999999999988887665
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa} Back     alignment and structure
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis} Back     alignment and structure
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus} Back     alignment and structure
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A* Back     alignment and structure
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A* Back     alignment and structure
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A* Back     alignment and structure
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A* Back     alignment and structure
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0 Back     alignment and structure
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0 Back     alignment and structure
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4 Back     alignment and structure
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A* Back     alignment and structure
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii} Back     alignment and structure
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4 Back     alignment and structure
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A Back     alignment and structure
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4 Back     alignment and structure
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes} Back     alignment and structure
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum} Back     alignment and structure
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4 Back     alignment and structure
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4 Back     alignment and structure
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa} Back     alignment and structure
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus} Back     alignment and structure
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis} Back     alignment and structure
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0 Back     alignment and structure
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes} Back     alignment and structure
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A* Back     alignment and structure
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0 Back     alignment and structure
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A Back     alignment and structure
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A* Back     alignment and structure
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4 Back     alignment and structure
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A* Back     alignment and structure
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4 Back     alignment and structure
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A* Back     alignment and structure
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii} Back     alignment and structure
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4 Back     alignment and structure
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum} Back     alignment and structure
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A* Back     alignment and structure
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4 Back     alignment and structure
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4 Back     alignment and structure
>3zux_A Transporter, ASBTNM; transport protein, membrane protein; HET: TCH LDA PTY; 2.20A {Neisseria meningitidis} PDB: 3zuy_A* Back     alignment and structure
>3g40_A Na-K-CL cotransporter; alpha/beta fold 10-stranded twisted beta sheet, transport protein; 1.90A {Methanosarcina acetivorans} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query694
d1mjha_160 "Hypothetical" protein MJ0577 {Archaeon Methanococ 99.22
d2z3va1135 Hypothetical protein TTHA0895 {Thermus thermophilu 99.2
d1jmva_140 Universal stress protein A, UspA {Haemophilus infl 99.06
d1tq8a_147 Hypothetical protein Rv1636 {Mycobacterium tubercu 98.98
d2gm3a1171 Putative ethylene-responsive protein AT3g01520/F4P 98.92
d1q77a_138 Hypothetical protein Aq_178 {Aquifex aeolicus [Tax 98.81
d2z3va1135 Hypothetical protein TTHA0895 {Thermus thermophilu 98.37
d1mjha_160 "Hypothetical" protein MJ0577 {Archaeon Methanococ 98.36
d1jmva_140 Universal stress protein A, UspA {Haemophilus infl 98.22
d1q77a_138 Hypothetical protein Aq_178 {Aquifex aeolicus [Tax 98.11
d1tq8a_147 Hypothetical protein Rv1636 {Mycobacterium tubercu 98.02
d2gm3a1171 Putative ethylene-responsive protein AT3g01520/F4P 97.09
>d1mjha_ c.26.2.4 (A:) "Hypothetical" protein MJ0577 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: Universal stress protein-like
domain: "Hypothetical" protein MJ0577
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.22  E-value=2.8e-11  Score=111.75  Aligned_cols=143  Identities=18%  Similarity=0.163  Sum_probs=95.1

Q ss_pred             eEEEEeecCCChHHHHHHHHhhCCCCCCCcEEEEEEeeccCCCCcchhhccccc-cC-CCCC--------CCCchhHHHH
Q 038780          360 RILVCTHRQDDALAGIRLLEISHPMKESPLSVYGLYLEPLTGGSTPLLINHQLG-QK-YSKS--------GAHRQPIIHV  429 (694)
Q Consensus       360 rILv~v~~~~~~~~ll~l~~~~~~~~~~p~~v~~Lhlvel~~~~~~~~~~~~~~-~~-~~~~--------~~~~~~i~~a  429 (694)
                      |||||+|.+++...+++.+..++  +.....++++|+++............... .. ....        ....++..+.
T Consensus         5 ~ILvavD~s~~s~~al~~a~~la--~~~~a~l~llhV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (160)
T d1mjha_           5 KILYPTDFSETAEIALKHVKAFK--TLKAEEVILLHVIDEREIKKRDIFSLLLGVAGLNKSVEEFENELKNKLTEEAKNK   82 (160)
T ss_dssp             EEEEECCSCHHHHHHHHHHHHTC--CSSCCEEEEEEEEEGGGTC-----------------CHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEECCCHHHHHHHHHHHHHH--HhcCCEEEEEEecccccccccccccccccccccchhHHHHHHHHHHHHHHHHHHH
Confidence            89999999999999999999998  44557899999998654322110000000 00 0000        0001122233


Q ss_pred             HHHHhHhCC-CceEEEEEEEEcCCCCchHHHHHHHHhcCccEEEecCccccCCCCccccchhHHHHHHHHHhhhCCCcEE
Q 038780          430 FRYFKAEHP-KFVQVQVFSAISPPKVMHEDICWLAFDKSISLIILPCHRKWNAKGELISDSQVLRNLNSKVLHKAPSSVG  508 (694)
Q Consensus       430 f~~~~~~~~-~~v~v~~~t~vs~~~~m~~~I~~~A~e~~~~lIilp~h~~~~~dg~~~~~~~~~r~~n~~Vl~~ApcsVg  508 (694)
                      ++.+.+... .+++++.....   .+..+.||+.|++.++|+||||.|++....+.+.      |++.++|++++||||.
T Consensus        83 l~~~~~~~~~~gv~~~~~~~~---G~~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~------GS~a~~vl~~s~~pVl  153 (160)
T d1mjha_          83 MENIKKELEDVGFKVKDIIVV---GIPHEEIVKIAEDEGVDIIIMGSHGKTNLKEILL------GSVTENVIKKSNKPVL  153 (160)
T ss_dssp             HHHHHHHHHHTTCEEEEEEEE---ECHHHHHHHHHHHTTCSEEEEESCCSSCCTTCSS------CHHHHHHHHHCCSCEE
T ss_pred             HHHHHHHHHhcCCeEEEEEEe---ccHHHHHhhhhhccccceEEeccCCCCccccccc------CcHHHHHHhcCCCCEE
Confidence            333322111 46777777666   6899999999999999999999999877665544      4488999999999998


Q ss_pred             EEecC
Q 038780          509 ILIDR  513 (694)
Q Consensus       509 Ilvdr  513 (694)
                      |+..+
T Consensus       154 vV~~~  158 (160)
T d1mjha_         154 VVKRK  158 (160)
T ss_dssp             EECCC
T ss_pred             EEcCC
Confidence            87554
>d2z3va1 c.26.2.4 (A:2-136) Hypothetical protein TTHA0895 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1jmva_ c.26.2.4 (A:) Universal stress protein A, UspA {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1tq8a_ c.26.2.4 (A:) Hypothetical protein Rv1636 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2gm3a1 c.26.2.4 (A:5-175) Putative ethylene-responsive protein AT3g01520/F4P13_7 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1q77a_ c.26.2.4 (A:) Hypothetical protein Aq_178 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d2z3va1 c.26.2.4 (A:2-136) Hypothetical protein TTHA0895 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1mjha_ c.26.2.4 (A:) "Hypothetical" protein MJ0577 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1jmva_ c.26.2.4 (A:) Universal stress protein A, UspA {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1q77a_ c.26.2.4 (A:) Hypothetical protein Aq_178 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1tq8a_ c.26.2.4 (A:) Hypothetical protein Rv1636 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2gm3a1 c.26.2.4 (A:5-175) Putative ethylene-responsive protein AT3g01520/F4P13_7 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure