Citrus Sinensis ID: 038787

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150---
Protein Sequence
MTPPLCAKGCGFYGTKEHKSMCSKCYNDFLEEQVTDGVVKRPLKLMQPNPSILVFDPRSLQSPSCSSSERTTIDSAAVECSSGKTTSALEKRCEICDKKVGSIELKCRCGHLYCGTHRYPKEHACTFDFKKFDRETLVEDDPLIRADKLEGRI
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccEEEEcccccccccccccccccccccHHHHHHHHHHHcccEEcccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccHccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHEcccccEEEccccEEEccccccccccccccHHHHHHHHHHHHccEEEEcHccccc
Coil and Loop (DISEMBL)
mtpplcakgcgfygtkehksMCSKCYNDFLeeqvtdgvvkrplklmqpnpsilvfdprslqspscssserttidsaavecssgkttsALEKRCEICDkkvgsielkcrcghlycgthrypkehactfdfkkfdretlveddpliradklegri
Flexible Loop (DISEMBL)
mtpplcakGCGFYGTKEHKSMCSKCYNDFLEEQVTDGVVKRPLKLMqpnpsilvfdprslQSPSCSsserttidsaavecssgkttsalekrCEICDKKVGSIELKCRCGHLYCGTHRYPKEHACTFDfkkfdretlveddpliradklegri
Low Complexity Region (SEG)
MTPPLCAKGCGFYGTKEHKSMCSKCYNDFLEEQVTDGVVKRPLKLMQPNPSILVFDPRslqspscsssERTTIDSAAVECSSGKTTSALEKRCEICDKKVGSIELKCRCGHLYCGTHRYPKEHACTFDFKKFDRETLVEDDPLIRADKLEGRI
Disordered region (IsUnstruct)
****LCAKGCGFYGTKEHKSMCSKCYNDFLEEQVTDGVVKRPLKLM*****ILV**********************************LEKRCEICDKKVGSIELKCRCGHLYCGTHRYPKEHACTFDFKKFDRETLVE**************
Disordered Region (DISOPRED)
**PPLCAKGCGFYGTKEHKSMCSKCY****************LKLMQPNP****************************************KRCEICDKKVGSIELKCRCGHLYCGTHRYPKEHACTFDFKKFDRETLVEDDPLIRADKLEG**
Disordered Region (DISEMBL)
MTPPLCAKGCGFYGTKEHKSMCSKCYNDFLEEQVTDGVVKRPLKLMQPNPSILVFDPR***************DSAAVECSSGKTTSALEKRCEICDKKVGSIELKCRCGHLYCGTHRYPKEHACTFDFKKFDRETLVEDDPLIRADKLEGRI
Disordered Region (DISPRO)
**PPLCAKGCGFYGTKEHKSMCSKCYNDFLEEQ********************************************************EKRCEICDKKVGSIELKCRCGHLYCGTHRYPKEHACTFDFKKFDRETLVEDDPLIRADKL****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTPPLCAKGCGFYGTKEHKSMCSKCYNDFLEEQVTDGVVKRPLKLMQPNPSILVFDPRSLQSPSCSSSERTTIDSAAVECSSGKTTSALEKRCEICDKKVGSIELKCRCGHLYCGTHRYPKEHACTFDFKKFDRETLVEDDPLIRADKLEGRI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	153	2.2.26 [Sep-21-2011]
O49663	176	Zinc finger A20 and AN1 d	yes	no	0.954	0.829	0.348	2e-23
Q9STJ9	130	Zinc finger A20 and AN1 d	no	no	0.777	0.915	0.379	4e-23
Q9SZ69	175	Zinc finger A20 and AN1 d	no	no	0.954	0.834	0.343	3e-22
Q6NNI8	168	Zinc finger A20 and AN1 d	no	no	0.947	0.863	0.402	7e-22
Q852K5	160	Zinc finger A20 and AN1 d	yes	no	0.888	0.85	0.364	9e-21
Q5JN07	355	Zinc finger A20 and AN1 d	no	no	0.928	0.4	0.368	7e-20
Q3EA33	125	Putative zinc finger A20	no	no	0.771	0.944	0.353	2e-19
Q9ZNU9	163	Zinc finger A20 and AN1 d	no	no	0.967	0.907	0.328	2e-19
Q7Y1W9	161	Zinc finger A20 and AN1 d	no	no	0.895	0.850	0.348	9e-19
Q6Z541	224	Zinc finger A20 and AN1 d	no	no	0.928	0.633	0.393	2e-18

>sp|O49663|SAP9_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Arabidopsis thaliana GN=SAP9 PE=2 SV=1

 Score =  107 bits (268), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 55/158 (34%), Positives = 85/158 (53%), Gaps = 12/158 (7%)

Query: 3   PPLCAKGCGFYGTKEHKSMCSKCYNDFLEEQVTDGVVKR----------PLKLMQPNPSI 52
           P LC KGCGF+G+  +  +CSKCY     E+    V K           P  L    P  
Sbjct: 19  PKLCVKGCGFFGSPSNMDLCSKCYRGICAEEAQTAVAKAAVEKSFKPSPPRSLFIAEPPA 78

Query: 53  LVFDPRSLQSPSCSSSERTTIDSAAVECSSGKTTSALEKRCEICDKKVGSIELKCRCGHL 112
           +V +P+  ++     S   +  S+AV  ++  +  A   RC  C+KKVG +  KC+CG  
Sbjct: 79  VVVEPKPEKAAVVVVSAEPS--SSAVPEANEPSRPARTNRCLCCNKKVGIMGFKCKCGST 136

Query: 113 YCGTHRYPKEHACTFDFKKFDRETLVEDDPLIRADKLE 150
           +CG HRYP+ H C+FDFK+  R  + + +P+++ADK++
Sbjct: 137 FCGEHRYPETHDCSFDFKEVGRGEIAKANPVVKADKIQ 174

May be involved in environmental stress response.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9STJ9|SAP10_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 10 OS=Arabidopsis thaliana GN=SAP10 PE=2 SV=1

 Score =  106 bits (265), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 81/145 (55%), Gaps = 26/145 (17%)

Query: 6   CAKGCGFYGTKEHKSMCSKCYNDFLEEQVTDGVVKRPLKLMQPNPSILVFDPRSLQSPSC 65
           C  GCG YGT+ + ++CS CY                  ++Q +P+ L F+P + QS  C
Sbjct: 10  CEGGCGLYGTRVNNNLCSLCYKK---------------SVLQHSPA-LRFEPETEQSQCC 53

Query: 66  SSSERTTIDSAAVECSSGKTTSALEKRCEICDKKVGSIELKCRCGHLYCGTHRYPKEHAC 125
             +    ++   V+          ++RC IC +KVG +  KCRCGH++CG+HRYP+EH+C
Sbjct: 54  PPTNSPAVEEEPVK----------KRRCGICKRKVGMLGFKCRCGHMFCGSHRYPEEHSC 103

Query: 126 TFDFKKFDRETLVEDDPLIRADKLE 150
            FD+K+  R  L    PLIRADKL+
Sbjct: 104 PFDYKQSGRLALATQLPLIRADKLQ 128

May be involved in environmental stress response.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SZ69|SAP7_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Arabidopsis thaliana GN=SAP7 PE=1 SV=1

 Score =  103 bits (258), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 88/160 (55%), Gaps = 14/160 (8%)

Query: 3   PPLCAKGCGFYGTKEHKSMCSKCYNDFLEEQ----VTDGVVKRPLKLMQPNPSILV---- 54
           P LC  GCGF+G+  + ++CSKCY     E+    V    VK  LKL  P+ SI+     
Sbjct: 16  PKLCDNGCGFFGSPSNMNLCSKCYRSLRAEEDQTAVAKAAVKNSLKL--PSCSIIAPGQK 73

Query: 55  ----FDPRSLQSPSCSSSERTTIDSAAVECSSGKTTSALEKRCEICDKKVGSIELKCRCG 110
                 P  L++   ++   +   +A  + +          RC  C+KKVG +  KC+CG
Sbjct: 74  HPLEIKPAHLETVVVTAEPSSVPVAAEQDEAEPSRPVRPNNRCFSCNKKVGVMGFKCKCG 133

Query: 111 HLYCGTHRYPKEHACTFDFKKFDRETLVEDDPLIRADKLE 150
             +CG+HRYP++H C+FDFK+  R+ + + +PL++ADK++
Sbjct: 134 STFCGSHRYPEKHECSFDFKEVGRDAIAKANPLVKADKVQ 173

May be involved in environmental stress response.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6NNI8|SAP1_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Arabidopsis thaliana GN=SAP1 PE=1 SV=1

 Score =  102 bits (255), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 62/154 (40%), Positives = 85/154 (55%), Gaps = 9/154 (5%)

Query: 3   PPLCAKGCGFYGTKEHKSMCSKCYNDF--LEEQVTDG--VVKRPLKLMQP--NPSILVFD 56
           P LC KGCGF+G+  + ++CSKCY D    EEQ       V++ L   +P   P      
Sbjct: 16  PKLCVKGCGFFGSPSNMNLCSKCYRDIRATEEQTASAKAAVEKSLNPNKPKTQPQQSQEI 75

Query: 57  PRSLQSPSCSSSERTTIDSAAVECSSGKTTSALEKRCEICDKKVGSIELKCRCGHLYCGT 116
            + +     SSS     DSAA      K+T+    RC  C+KKVG    KCRCG  +CGT
Sbjct: 76  TQGVLGSGSSSSSTRGGDSAAAPLDPPKSTAT---RCLSCNKKVGVTGFKCRCGSTFCGT 132

Query: 117 HRYPKEHACTFDFKKFDRETLVEDDPLIRADKLE 150
           HRYP+ H C FDFK   RE + + +P+++ADK++
Sbjct: 133 HRYPESHECQFDFKGVAREAIAKANPVVKADKVD 166

May be involved in environmental stress response.

Arabidopsis thaliana (taxid: 3702)

>sp|Q852K5|SAP6_ORYSJ Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Oryza sativa subsp. japonica GN=SAP6 PE=2 SV=1

 Score = 99.0 bits (245), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 54/148 (36%), Positives = 78/148 (52%), Gaps = 12/148 (8%)

Query: 3   PPLCAKGCGFYGTKEHKSMCSKCYNDFLEEQVTDGVV-KRPLKLMQPNPSILVFDPRSLQ 61
           P LC   CGF+G++  ++MCSKCY D ++ +    VV K+PL  +   P  LV +     
Sbjct: 21  PILCVNNCGFFGSRMTENMCSKCYRDTVKAKTVATVVEKKPLASLSSTP--LVTEVTDGG 78

Query: 62  SPSCSSSERTTIDSAAVECSSGKTTSALEKRCEICDKKVGSIELKCRCGHLYCGTHRYPK 121
           S S +  ++   +          T      RC  C KKVG    KCRCG  +C  HRY  
Sbjct: 79  SGSVADGKQVMEED---------TPKPPSNRCLSCRKKVGLTGFKCRCGGTFCSMHRYAD 129

Query: 122 EHACTFDFKKFDRETLVEDDPLIRADKL 149
            H CTFD+K+  RE + + +PL++ADK+
Sbjct: 130 SHKCTFDYKQVGREQIAKQNPLVKADKI 157

May be involved in environmental stress response.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q5JN07|SAP3_ORYSJ Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Oryza sativa subsp. japonica GN=SAP3 PE=2 SV=2

 Score = 96.3 bits (238), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 80/163 (49%), Gaps = 21/163 (12%)

Query: 3   PPLCAKGCGFYGTKEHKSMCSKCYNDFLEEQVTDGVVKRPLKLMQPNPSILVFDPR---- 58
           P LCA GCGFYG      MCS CY    +  + +G        M   PS  V        
Sbjct: 202 PVLCASGCGFYGNPATLDMCSVCYR---QHCLLNGAT------MATGPSSSVAAASAATV 252

Query: 59  ---SLQSPSCSSSERTTIDSAAVECSSGKTTSALEK-----RCEICDKKVGSIELKCRCG 110
              ++ S SCS        +A    ++ +  + +EK     RC  C KKVG +   CRCG
Sbjct: 253 ATGAVTSDSCSVPSAEVNGAAFSSKNNPEPATVVEKKAPANRCASCKKKVGLLGFACRCG 312

Query: 111 HLYCGTHRYPKEHACTFDFKKFDRETLVEDDPLIRADKLEGRI 153
             YCGTHRYP++HAC FDFK   R+ +   +PLI+ +KL  +I
Sbjct: 313 ATYCGTHRYPEKHACGFDFKGASRDAIARANPLIKGEKLTNKI 355

May be involved in environmental stress response.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q3EA33|SAP8_ARATH Putative zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Arabidopsis thaliana GN=SAP8 PE=3 SV=1

 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 74/147 (50%), Gaps = 29/147 (19%)

Query: 3   PPLCAKGCGFYGTKEHKSMCSKCYNDFLEEQVTDGVVKRPLKLMQPNPSILVFDPRSLQS 62
           P LC +GCGF+ T + K++CSKCYNDFL+++       R L     N             
Sbjct: 5   PSLCIRGCGFFSTSQTKNLCSKCYNDFLKDESA-----RYLATFNVNT------------ 47

Query: 63  PSCSSSERTTIDSAAVECSSGKTTSALEKRCEICDKKVGSIELKCRCGHLYCGTHRYPKE 122
               ++E  T   A V  S G            C KKVG +   CRCGHL+  +HRYP+E
Sbjct: 48  ---KAAEEVTAQEATVLGSKGGCA---------CKKKVGLLGFHCRCGHLFFASHRYPEE 95

Query: 123 HACTFDFKKFDRETLVEDDPLIRADKL 149
           H+C  D+K    + L + +P+++ DKL
Sbjct: 96  HSCPSDYKSAAIDVLAKQNPVVKGDKL 122

May be involved in environmental stress response.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZNU9|SAP3_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Arabidopsis thaliana GN=SAP3 PE=2 SV=1

 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 4/152 (2%)

Query: 3   PPLCAKGCGFYGTKEHKSMCSKCYNDFLEEQVTDGVVKRPLKLMQPNPSILVFDPRSLQS 62
           P LCA  CGF+G+   +++CSKC+ D   ++      K  L               S   
Sbjct: 10  PRLCANNCGFFGSTATQNLCSKCFRDLQHQEQNSSTAKHALTQSLAAVGAAASSSVSPPP 69

Query: 63  PSCSSS----ERTTIDSAAVECSSGKTTSALEKRCEICDKKVGSIELKCRCGHLYCGTHR 118
           P  + S    E  +   AA E           KRC  C ++VG    +CRCG ++CGTHR
Sbjct: 70  PPPADSKEIVEAKSEKRAAAEPEEADGPPQDPKRCLTCRRRVGITGFRCRCGFVFCGTHR 129

Query: 119 YPKEHACTFDFKKFDRETLVEDDPLIRADKLE 150
           Y ++H C+FDFK+  ++ + + +P+++ADKLE
Sbjct: 130 YAEQHECSFDFKRMGKDKIAKANPIVKADKLE 161

May be involved in environmental stress response.

Arabidopsis thaliana (taxid: 3702)

>sp|Q7Y1W9|SAP9_ORYSJ Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Oryza sativa subsp. japonica GN=SAP9 PE=2 SV=1

 Score = 92.4 bits (228), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 77/149 (51%), Gaps = 12/149 (8%)

Query: 3   PPLCAKGCGFYGTKEHKSMCSKCYNDFLEEQVTDGVVKRPLKLMQPNPSILVFDPRSLQS 62
           P LC   CGF+G+    +MCSKCY DF+  +VT         +  P      F P S   
Sbjct: 20  PILCVNNCGFFGSSMTNNMCSKCYRDFV--KVTT--------MAAPVVEKKAFTPASSSK 69

Query: 63  PSCSSSERTTIDSAAVE--CSSGKTTSALEKRCEICDKKVGSIELKCRCGHLYCGTHRYP 120
                ++   + +AAVE   ++ +       RC  C KKVG    +CRCG  +C THRY 
Sbjct: 70  TPLEPAKPDEVPAAAVEDKQAAQEPPKPPSNRCLSCRKKVGLTGFQCRCGGTFCSTHRYT 129

Query: 121 KEHACTFDFKKFDRETLVEDDPLIRADKL 149
           + H CTFD+KK  R+ + + +P++ A+K+
Sbjct: 130 EAHDCTFDYKKAGRDQIAKQNPVVIAEKI 158

May be involved in environmental stress response.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q6Z541|SAP12_ORYSJ Zinc finger A20 and AN1 domain-containing stress-associated protein 12 OS=Oryza sativa subsp. japonica GN=SAP12 PE=2 SV=1

 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/145 (39%), Positives = 80/145 (55%), Gaps = 3/145 (2%)

Query: 5   LCAKGCGFYGTKEHKSMCSKCYNDFLEEQVTDGVVKRPLKLMQPNPSILVFDPRSLQSPS 64
           LC+ GCGF+G+KE  +MCSKCY D L+   +                I V  P +  + +
Sbjct: 80  LCSSGCGFFGSKETNNMCSKCYRDHLK-ATSPLFSSSSSPATASTTDITV--PIAPATTA 136

Query: 65  CSSSERTTIDSAAVECSSGKTTSALEKRCEICDKKVGSIELKCRCGHLYCGTHRYPKEHA 124
            + S +   + A    SS    +A   RC  C KKVG +  +CRCG  +C THR+  +HA
Sbjct: 137 PTPSLKGKEEEATAAASSSAAAAAKPNRCVACRKKVGLLGFECRCGGTFCSTHRHADKHA 196

Query: 125 CTFDFKKFDRETLVEDDPLIRADKL 149
           CTFDFKK DRE + +++PLI A K+
Sbjct: 197 CTFDFKKSDREKIAKENPLIVAPKI 221

May be involved in environmental stress response.

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	153
224136822	147	predicted protein [Populus trichocarpa]	0.915	0.952	0.480	7e-30
255539675	166	zinc finger protein, putative [Ricinus c	0.862	0.795	0.442	2e-27
224120194	147	predicted protein [Populus trichocarpa]	0.908	0.945	0.431	6e-26
224134549	130	predicted protein [Populus trichocarpa]	0.843	0.992	0.434	2e-25
222822687	165	stress-associated protein 6 [Solanum pen	0.941	0.872	0.395	3e-24
222822661	152	stress-associated protein 6 [Solanum lyc	0.941	0.947	0.389	1e-23
225455543	153	PREDICTED: zinc finger A20 and AN1 domai	0.960	0.960	0.396	1e-23
225455582	152	PREDICTED: zinc finger A20 and AN1 domai	0.986	0.993	0.409	2e-23
225423783	189	PREDICTED: zinc finger A20 and AN1 domai	0.960	0.777	0.379	1e-22
224054049	171	predicted protein [Populus trichocarpa]	0.941	0.842	0.374	2e-22

>gi|224136822|ref|XP_002322424.1| predicted protein [Populus trichocarpa] gi|222869420|gb|EEF06551.1| predicted protein [Populus trichocarpa]

 Score =  135 bits (339), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 74/154 (48%), Positives = 100/154 (64%), Gaps = 14/154 (9%)

Query: 1   MTPPLCAKGCGFYGTKEHKSMCSKCYNDFLEEQVTDGVVKRPLKLMQPNPSILVFDPRSL 60
           +TP LCAKGCGF+G+ E+K++CSKCY D+L+E+V   + K   KL     S LV  P S 
Sbjct: 7   LTPALCAKGCGFFGSPENKNLCSKCYKDYLKEEV---IAKTADKL-----SELVITPSSD 58

Query: 61  -QSPSCSSSERTTIDSAAVECSSGKTTSALEKRCEICDKKVGSIELKCRCGHLYCGTHRY 119
            ++P+  S+E  +  +A         T+ L+ RCE C KKVG +  KCRCG  +CG HRY
Sbjct: 59  DKNPAVVSNETASTTTATAS-----ATTVLKNRCECCGKKVGLMGFKCRCGKTFCGVHRY 113

Query: 120 PKEHACTFDFKKFDRETLVEDDPLIRADKLEGRI 153
            KEH+CTFDFK FDR+ L + +PL+  DKL+ RI
Sbjct: 114 AKEHSCTFDFKTFDRQILAKQNPLVAGDKLDARI 147

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255539675|ref|XP_002510902.1| zinc finger protein, putative [Ricinus communis] gi|223550017|gb|EEF51504.1| zinc finger protein, putative [Ricinus communis]

 Score =  127 bits (319), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 66/149 (44%), Positives = 95/149 (63%), Gaps = 17/149 (11%)

Query: 1   MTPPLCAKGCGFYGTKEHKSMCSKCYNDFLEEQVTDGVVKRPLKLMQPNPSILVFDPRSL 60
           +TPP CA+GCGF+G+ E+++MCSKCY D+L++++       P    +P+P+         
Sbjct: 8   VTPPSCARGCGFFGSAENRNMCSKCYTDYLKQEIIAKTNSAP----EPSPA--------- 54

Query: 61  QSPSCSSSERTTID---SAAVECSSGKTTSALEKRCEICDKKVGSIELKCRCGHLYCGTH 117
            S S S+   T I+   +AA E  + K+    + RCE C+KKVG     CRCG + CGTH
Sbjct: 55  -SNSLSNKIATCINIKEAAAEEEETAKSVPVAKNRCESCNKKVGVTGFACRCGKVLCGTH 113

Query: 118 RYPKEHACTFDFKKFDRETLVEDDPLIRA 146
           RYPKEH CTFDFK+ DR+ LV+ +PL++A
Sbjct: 114 RYPKEHCCTFDFKRADRDLLVKQNPLVKA 142

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120194|ref|XP_002318269.1| predicted protein [Populus trichocarpa] gi|222858942|gb|EEE96489.1| predicted protein [Populus trichocarpa]

 Score =  122 bits (305), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 66/153 (43%), Positives = 94/153 (61%), Gaps = 14/153 (9%)

Query: 2   TPPLCAKGCGFYGTKEHKSMCSKCYNDFLEEQVTDGVVKRPLK-LMQPNPSILVFDPRSL 60
           T PLCAKGCGF+G+ E+++ CSKCY ++L+E    G++  P K L +P      FD    
Sbjct: 8   TLPLCAKGCGFFGSPENENFCSKCYKEYLKE----GLIAEPSKKLSEPIVVTPSFD---- 59

Query: 61  QSPSCSSSERTTIDSAAVECSSGKTTSALEKRCEICDKKVGSIELKCRCGHLYCGTHRYP 120
                 +S     D      ++  +TS ++ RCE C+KKVG +  +CRCG+ +CG HRYP
Sbjct: 60  -----DNSPDVVTDETTSTTTAVASTSKVKNRCECCNKKVGLMGFECRCGNTFCGVHRYP 114

Query: 121 KEHACTFDFKKFDRETLVEDDPLIRADKLEGRI 153
           KEH+CTFDFK  D++ L + +PL+  DKL  RI
Sbjct: 115 KEHSCTFDFKTLDQQNLAKQNPLVAGDKLGSRI 147

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224134549|ref|XP_002321850.1| predicted protein [Populus trichocarpa] gi|222868846|gb|EEF05977.1| predicted protein [Populus trichocarpa]

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 63/145 (43%), Positives = 88/145 (60%), Gaps = 16/145 (11%)

Query: 5   LCAKGCGFYGTKEHKSMCSKCYNDFLEEQVTDGVVKRPLKLMQPNPSILVFDPRSLQSPS 64
           LCAKGCGF+G+ E+K++CSKCY D+L+E+  + +            S LV  P S     
Sbjct: 1   LCAKGCGFFGSPENKNLCSKCYKDYLKEETANKL------------SELVITPSSGDKNQ 48

Query: 65  CSSSERTTIDSAAVECSSGKTTSALEKRCEICDKKVGSIELKCRCGHLYCGTHRYPKEHA 124
              S+ T   ++        T++ L+ RCE C+KKVG +  KCRCG  +CG HRY KEH+
Sbjct: 49  AVVSDETASTASTTA----STSTVLKNRCECCNKKVGLMGFKCRCGKTFCGVHRYAKEHS 104

Query: 125 CTFDFKKFDRETLVEDDPLIRADKL 149
           CTFDFK +DR+ L + +PL+  DKL
Sbjct: 105 CTFDFKTYDRQNLAKQNPLVAGDKL 129

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|222822687|gb|ACM68456.1| stress-associated protein 6 [Solanum pennellii]

 Score =  116 bits (291), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 86/149 (57%), Gaps = 5/149 (3%)

Query: 3   PPLCAKGCGFYGTKEHKSMCSKCYNDFLEEQVTDGVVKRPL-KLMQPNPSILVFDPRSLQ 61
           P LC+ GCGF+GT   K +CSKCY DF  ++    + K  + KL+   P I         
Sbjct: 19  PILCSNGCGFFGTAATKGLCSKCYRDFKMKEDHAAMAKVAMEKLVISRPQIESIGKVDF- 77

Query: 62  SPSCSSSERTTIDSAAVECSSGKTTSALEKRCEICDKKVGSIELKCRCGHLYCGTHRYPK 121
              CSS+  T  +   VE ++ +   +   RC  C KKVG +  KCRCG  +CGTHRYP+
Sbjct: 78  ---CSSTTSTVTERPVVEAATAEIGGSQPNRCFSCRKKVGFVGFKCRCGSTFCGTHRYPE 134

Query: 122 EHACTFDFKKFDRETLVEDDPLIRADKLE 150
           +H CTFDFK   +E + + +P+++ADK++
Sbjct: 135 KHDCTFDFKVKGKEEICKANPVVKADKIQ 163

Source: Solanum pennellii

Species: Solanum pennellii

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|222822661|gb|ACM68443.1| stress-associated protein 6 [Solanum lycopersicum]

 Score =  114 bits (286), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 85/149 (57%), Gaps = 5/149 (3%)

Query: 3   PPLCAKGCGFYGTKEHKSMCSKCYNDFLEEQVTDGVVKRPL-KLMQPNPSILVFDPRSLQ 61
           P LC+ GCGF+GT     +CSKCY DF  ++    + K  + KL+   P I         
Sbjct: 6   PILCSNGCGFFGTAATNGLCSKCYRDFKMKEDHAAMAKVAMEKLVISRPQIESIGKVDF- 64

Query: 62  SPSCSSSERTTIDSAAVECSSGKTTSALEKRCEICDKKVGSIELKCRCGHLYCGTHRYPK 121
              CSS+  T  +   VE ++ +   +   RC  C KKVG +  KCRCG  +CGTHRYP+
Sbjct: 65  ---CSSTTSTAAERPVVEAATAEIGGSQPNRCLSCRKKVGFVGFKCRCGSTFCGTHRYPE 121

Query: 122 EHACTFDFKKFDRETLVEDDPLIRADKLE 150
           +H CTFDFK   +E + + +P+++ADK++
Sbjct: 122 KHDCTFDFKIKGKEEICKANPVVKADKIQ 150

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225455543|ref|XP_002267954.1| PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 9-like [Vitis vinifera]

 Score =  114 bits (286), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 61/154 (39%), Positives = 90/154 (58%), Gaps = 7/154 (4%)

Query: 3   PPLCAKGCGFYGTKEHKSMCSKCYNDFL--EEQVTDGVVKRPLKLMQPNPSILVFDPRSL 60
           P LCA GCGF+GT   +++CSKCY DFL  EE+ T   V    K M P     V    SL
Sbjct: 4   PILCANGCGFFGTTATRNLCSKCYRDFLKEEEESTKTKVMSMKKAMGPR----VESTSSL 59

Query: 61  QSPSCSSSERT-TIDSAAVECSSGKTTSALEKRCEICDKKVGSIELKCRCGHLYCGTHRY 119
              + S ++ + ++D+     +   +T    ++CE+C KK+G I  KCRCG ++CG HR 
Sbjct: 60  DDVATSMAQLSLSLDNTKKTSNGDPSTKMKSEQCEMCKKKMGIIGFKCRCGSMFCGKHRL 119

Query: 120 PKEHACTFDFKKFDRETLVEDDPLIRADKLEGRI 153
           P++H C FD+K   RE L + +P ++ +KL GR+
Sbjct: 120 PEKHECNFDYKAMGREILRKQNPSLKPEKLPGRL 153

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225455582|ref|XP_002269276.1| PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 7 [Vitis vinifera] gi|296084115|emb|CBI24503.3| unnamed protein product [Vitis vinifera]

 Score =  114 bits (284), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/154 (40%), Positives = 88/154 (57%), Gaps = 3/154 (1%)

Query: 1   MTPPLCAKGCGFYGTKEHKSMCSKCYNDFLEEQVTDGVVKRPLKLMQPNPSILVFDPRSL 60
           M PPLC  GCGF+GT   +++CSKCY DFL+E+      K   K M+      V    S+
Sbjct: 1   MDPPLCVNGCGFFGTPATQNLCSKCYKDFLKEEEE--AAKAKTKSMEKAMGSTVASTSSV 58

Query: 61  QSPSCSSSERT-TIDSAAVECSSGKTTSALEKRCEICDKKVGSIELKCRCGHLYCGTHRY 119
                S ++ + + ++     S   +T    +RCE C KKVG I  KCRCG ++C  HR 
Sbjct: 59  DDVVTSMTQLSLSSENTKKTISDDSSTKKKVERCETCKKKVGIIGFKCRCGSMFCAEHRL 118

Query: 120 PKEHACTFDFKKFDRETLVEDDPLIRADKLEGRI 153
           P++H C+FD+K   RE L +  PLI+ DKLEGR+
Sbjct: 119 PEKHECSFDYKTMGREILKKQIPLIKPDKLEGRV 152

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225423783|ref|XP_002277381.1| PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 7-like [Vitis vinifera]

 Score =  111 bits (277), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 58/153 (37%), Positives = 87/153 (56%), Gaps = 6/153 (3%)

Query: 3   PPLCAKGCGFYGTKEHKSMCSKCYNDFL--EEQVTDGVVKRPLKLMQPNPSILVFDPRSL 60
           P LCA GCGF+GT   +++CSKCY DFL  EE+ T        K ++P     V    SL
Sbjct: 41  PTLCANGCGFFGTPATQNLCSKCYRDFLKEEEESTKAKAMSMKKAIRPR----VESTSSL 96

Query: 61  QSPSCSSSERTTIDSAAVECSSGKTTSALEKRCEICDKKVGSIELKCRCGHLYCGTHRYP 120
              + S  + +       +  +G +++   ++CE+C KKVG I  KCRCG ++CG HR P
Sbjct: 97  DDVAISMVQLSLSFDNTKKTINGNSSTKKSEQCEMCKKKVGIIGFKCRCGSMFCGKHRLP 156

Query: 121 KEHACTFDFKKFDRETLVEDDPLIRADKLEGRI 153
           ++H C FD+K   RE L++ +P ++ +KL  R 
Sbjct: 157 EKHECNFDYKAMGREILMKQNPPLKPEKLPVRF 189

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224054049|ref|XP_002298087.1| predicted protein [Populus trichocarpa] gi|222845345|gb|EEE82892.1| predicted protein [Populus trichocarpa]

 Score =  110 bits (274), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/163 (37%), Positives = 83/163 (50%), Gaps = 19/163 (11%)

Query: 3   PPLCAKGCGFYGTKEHKSMCSKCYNDFLEEQVTDGVVKRPL------KLMQPNPSILVFD 56
           P LCA GCGF+GT  + ++CSKCY D   E+      K  +      K  Q   S +  D
Sbjct: 16  PQLCANGCGFFGTAANMNLCSKCYRDLRAEEEQAAFAKAAMEKTLNMKSQQHIDSRVAVD 75

Query: 57  P------RSLQSPSCSSSERTTIDSAAVECSSGKTTSALEKRCEICDKKVGSIELKCRCG 110
                   S+QS   SSS  T +       +  + +S    RC  C+KKVG     C+CG
Sbjct: 76  APQVAVANSMQSAEASSSAETAV------AAGDQVSSKPANRCFSCNKKVGLTGFMCKCG 129

Query: 111 HLYCGTHRYPKEHACTFDFKKFDRETLVEDDPLIRADKLEGRI 153
             YCGTHRY + H C+FDFK   R  + + +P+I+ADK+ GR 
Sbjct: 130 GTYCGTHRYSENHECSFDFKGAGRNAIAKANPVIKADKV-GRF 171

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	153
TAIR|locus:2034650	168	AT1G12440 [Arabidopsis thalian	0.947	0.863	0.383	5.9e-25
TAIR|locus:2132649	176	AT4G22820 [Arabidopsis thalian	0.967	0.840	0.352	7.6e-25
TAIR|locus:2138053	130	SAP10 "stress-associated prote	0.398	0.469	0.573	3e-24
TAIR|locus:504955427	125	AT4G14225 [Arabidopsis thalian	0.483	0.592	0.405	1e-23
TAIR|locus:2118036	175	SAP7 "stress-associated protei	0.967	0.845	0.335	1.8e-23
GENEDB_PFALCIPARUM|PF08_0056	191	PF08_0056 "zinc finger protein	0.509	0.408	0.354	1.1e-22
UNIPROTKB|Q8IB20	191	PF08_0056 "Zinc finger protein	0.509	0.408	0.354	1.1e-22
UNIPROTKB|E1C732	204	E1C732 "Uncharacterized protei	0.516	0.387	0.367	1.4e-22
TAIR|locus:2042011	163	AT2G27580 [Arabidopsis thalian	0.967	0.907	0.328	2.1e-22
ZFIN|ZDB-GENE-030131-8405	232	zfand6 "zinc finger, AN1-type	0.398	0.262	0.442	9.7e-22

TAIR|locus:2034650 AT1G12440 [Arabidopsis thaliana (taxid:3702)]

 Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
 Identities = 59/154 (38%), Positives = 81/154 (52%)

Query:     3 PPLCAKGCGFYGTKEHKSMCSKCYNDF--LEEQVTDG--VVKRPLKLMQPNPSILVFDPR 58
             P LC KGCGF+G+  + ++CSKCY D    EEQ       V++ L   +P          
Sbjct:    16 PKLCVKGCGFFGSPSNMNLCSKCYRDIRATEEQTASAKAAVEKSLNPNKPKTQPQQSQEI 75

Query:    59 XXXXXXXXXXERTTI--DSAAVECSSGKTTSALEKRCEICDKKVGSIELKCRCGHLYCGT 116
                         +T   DSAA      K+T+    RC  C+KKVG    KCRCG  +CGT
Sbjct:    76 TQGVLGSGSSSSSTRGGDSAAAPLDPPKSTAT---RCLSCNKKVGVTGFKCRCGSTFCGT 132

Query:   117 HRYPKEHACTFDFKKFDRETLVEDDPLIRADKLE 150
             HRYP+ H C FDFK   RE + + +P+++ADK++
Sbjct:   133 HRYPESHECQFDFKGVAREAIAKANPVVKADKVD 166

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

TAIR|locus:2132649 AT4G22820 [Arabidopsis thaliana (taxid:3702)]

 Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
 Identities = 55/156 (35%), Positives = 82/156 (52%)

Query:     3 PPLCAKGCGFYGTKEHKSMCSKCYNDFLEEQVTDGVVKRPL-KLMQPNPSILVFDPRXXX 61
             P LC KGCGF+G+  +  +CSKCY     E+    V K  + K  +P+P   +F      
Sbjct:    19 PKLCVKGCGFFGSPSNMDLCSKCYRGICAEEAQTAVAKAAVEKSFKPSPPRSLFIAEPPA 78

Query:    62 XXXXXXXERTTIDSAAVECSSGKTTSALE-------KRCEICDKKVGSIELKCRCGHLYC 114
                    E+  +   + E SS     A E        RC  C+KKVG +  KC+CG  +C
Sbjct:    79 VVVEPKPEKAAVVVVSAEPSSSAVPEANEPSRPARTNRCLCCNKKVGIMGFKCKCGSTFC 138

Query:   115 GTHRYPKEHACTFDFKKFDRETLVEDDPLIRADKLE 150
             G HRYP+ H C+FDFK+  R  + + +P+++ADK++
Sbjct:   139 GEHRYPETHDCSFDFKEVGRGEIAKANPVVKADKIQ 174

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

GO:0010200 "response to chitin" evidence=RCA

TAIR|locus:2138053 SAP10 "stress-associated protein 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 216 (81.1 bits), Expect = 3.0e-24, Sum P(2) = 3.0e-24
 Identities = 35/61 (57%), Positives = 47/61 (77%)

Query:    90 EKRCEICDKKVGSIELKCRCGHLYCGTHRYPKEHACTFDFKKFDRETLVEDDPLIRADKL 149
             ++RC IC +KVG +  KCRCGH++CG+HRYP+EH+C FD+K+  R  L    PLIRADKL
Sbjct:    68 KRRCGICKRKVGMLGFKCRCGHMFCGSHRYPEEHSCPFDYKQSGRLALATQLPLIRADKL 127

Query:   150 E 150
             +
Sbjct:   128 Q 128

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

GO:0010038 "response to metal ion" evidence=IEP

GO:0010042 "response to manganese ion" evidence=IMP

GO:0010043 "response to zinc ion" evidence=IMP

GO:0010045 "response to nickel cation" evidence=IMP

GO:0034605 "cellular response to heat" evidence=IEP

GO:0070417 "cellular response to cold" evidence=IEP

GO:0071472 "cellular response to salt stress" evidence=IEP

GO:0006457 "protein folding" evidence=RCA

GO:0009408 "response to heat" evidence=RCA

GO:0009644 "response to high light intensity" evidence=RCA

GO:0042542 "response to hydrogen peroxide" evidence=RCA

TAIR|locus:504955427 AT4G14225 [Arabidopsis thaliana (taxid:3702)]

 Score = 163 (62.4 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
 Identities = 30/74 (40%), Positives = 45/74 (60%)

Query:    76 AAVECSSGKTTSALEKRCEICDKKVGSIELKCRCGHLYCGTHRYPKEHACTFDFKKFDRE 135
             AA E ++ + T    K    C KKVG +   CRCGHL+  +HRYP+EH+C  D+K    +
Sbjct:    49 AAEEVTAQEATVLGSKGGCACKKKVGLLGFHCRCGHLFFASHRYPEEHSCPSDYKSAAID 108

Query:   136 TLVEDDPLIRADKL 149
              L + +P+++ DKL
Sbjct:   109 VLAKQNPVVKGDKL 122

GO:0003677 "DNA binding" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2118036 SAP7 "stress-associated protein 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
 Identities = 53/158 (33%), Positives = 85/158 (53%)

Query:     3 PPLCAKGCGFYGTKEHKSMCSKCYNDFLEEQVTDGVVKRPLK--LMQPNPSILVFDPRXX 60
             P LC  GCGF+G+  + ++CSKCY     E+    V K  +K  L  P+ SI+    +  
Sbjct:    16 PKLCDNGCGFFGSPSNMNLCSKCYRSLRAEEDQTAVAKAAVKNSLKLPSCSIIAPGQKHP 75

Query:    61 XXXXXXXXERTTIDS------AAVECSSGKTTSALE--KRCEICDKKVGSIELKCRCGHL 112
                     E   + +       A E    + +  +    RC  C+KKVG +  KC+CG  
Sbjct:    76 LEIKPAHLETVVVTAEPSSVPVAAEQDEAEPSRPVRPNNRCFSCNKKVGVMGFKCKCGST 135

Query:   113 YCGTHRYPKEHACTFDFKKFDRETLVEDDPLIRADKLE 150
             +CG+HRYP++H C+FDFK+  R+ + + +PL++ADK++
Sbjct:   136 FCGSHRYPEKHECSFDFKEVGRDAIAKANPLVKADKVQ 173

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

GENEDB_PFALCIPARUM|PF08_0056 PF08_0056 "zinc finger protein, putative" [Plasmodium falciparum (taxid:5833)]

 Score = 173 (66.0 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
 Identities = 28/79 (35%), Positives = 48/79 (60%)

Query:    72 TIDSAAVECSSGKTTSALEKRCEICDKKVGSIELKCRCGHLYCGTHRYPKEHACTFDFKK 131
             T+D+   + +S +      K C  C K++G + +KCRC H +C  HRY   H CTFD+K 
Sbjct:   112 TLDNTEEKDNSSQPVEDKSK-CFFCSKRIGLVGIKCRCNHYFCSLHRYADAHNCTFDYKN 170

Query:   132 FDRETLVEDDPLIRADKLE 150
             + ++ L++++  + ADK+E
Sbjct:   171 YHKQQLIKNNVKVVADKVE 189

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q8IB20 PF08_0056 "Zinc finger protein, putative" [Plasmodium falciparum 3D7 (taxid:36329)]

 Score = 173 (66.0 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
 Identities = 28/79 (35%), Positives = 48/79 (60%)

Query:    72 TIDSAAVECSSGKTTSALEKRCEICDKKVGSIELKCRCGHLYCGTHRYPKEHACTFDFKK 131
             T+D+   + +S +      K C  C K++G + +KCRC H +C  HRY   H CTFD+K 
Sbjct:   112 TLDNTEEKDNSSQPVEDKSK-CFFCSKRIGLVGIKCRCNHYFCSLHRYADAHNCTFDYKN 170

Query:   132 FDRETLVEDDPLIRADKLE 150
             + ++ L++++  + ADK+E
Sbjct:   171 YHKQQLIKNNVKVVADKVE 189

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|E1C732 E1C732 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 163 (62.4 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
 Identities = 29/79 (36%), Positives = 47/79 (59%)

Query:    72 TIDSAAVECSSGKTTSALEKRCEICDKKVGSIELKCRCGHLYCGTHRYPKEHACTFDFKK 131
             T  SAA + +S +     + RC  C KK+G     CRCG+L+C  HRY   HAC +D+K 
Sbjct:   124 TSQSAAEDKTSPEKPKQKKNRCFTCRKKIGLTGFDCRCGNLFCAIHRYSDMHACPYDYKA 183

Query:   132 FDRETLVEDDPLIRADKLE 150
                E + +++P++ A+K++
Sbjct:   184 EAAEKIRKENPVVIAEKIQ 202

GO:0003677 "DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

TAIR|locus:2042011 AT2G27580 [Arabidopsis thaliana (taxid:3702)]

 Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
 Identities = 50/152 (32%), Positives = 78/152 (51%)

Query:     3 PPLCAKGCGFYGTKEHKSMCSKCYNDFLEEQVTDGVVK----RPLKLMQPNPSILVFDPR 58
             P LCA  CGF+G+   +++CSKC+ D   ++      K    + L  +    S  V  P 
Sbjct:    10 PRLCANNCGFFGSTATQNLCSKCFRDLQHQEQNSSTAKHALTQSLAAVGAAASSSVSPPP 69

Query:    59 XXXXXXXXXXERTTIDSAAVECSSGKTTSALEKRCEICDKKVGSIELKCRCGHLYCGTHR 118
                       E  +   AA E           KRC  C ++VG    +CRCG ++CGTHR
Sbjct:    70 PPPADSKEIVEAKSEKRAAAEPEEADGPPQDPKRCLTCRRRVGITGFRCRCGFVFCGTHR 129

Query:   119 YPKEHACTFDFKKFDRETLVEDDPLIRADKLE 150
             Y ++H C+FDFK+  ++ + + +P+++ADKLE
Sbjct:   130 YAEQHECSFDFKRMGKDKIAKANPIVKADKLE 161

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

ZFIN|ZDB-GENE-030131-8405 zfand6 "zinc finger, AN1-type domain 6" [Danio rerio (taxid:7955)]

 Score = 159 (61.0 bits), Expect = 9.7e-22, Sum P(2) = 9.7e-22
 Identities = 27/61 (44%), Positives = 39/61 (63%)

Query:    90 EKRCEICDKKVGSIELKCRCGHLYCGTHRYPKEHACTFDFKKFDRETLVEDDPLIRADKL 149
             + RC  C KKVG     CRCG L+CG HRY   H+C+FD+K    E + +++PLI  +K+
Sbjct:   170 KNRCFTCRKKVGLTGFDCRCGQLFCGIHRYSDVHSCSFDYKADAAEKIRKENPLIVGEKI 229

Query:   150 E 150
             +
Sbjct:   230 K 230

GO:0003677 "DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0046872 "metal ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q852K5	SAP6_ORYSJ	No assigned EC number	0.3648	0.8888	0.85	yes	no
O49663	SAP9_ARATH	No assigned EC number	0.3481	0.9542	0.8295	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.XV.3016.1 hypothetical protein (136 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	153
smart00154	39	smart00154, ZnF_AN1, AN1-like Zinc finger	3e-07
pfam01754	25	pfam01754, zf-A20, A20-like zinc finger	1e-05
pfam01428	43	pfam01428, zf-AN1, AN1-like Zinc finger	8e-05

>gnl|CDD|197545 smart00154, ZnF_AN1, AN1-like Zinc finger

 Score = 44.3 bits (105), Expect = 3e-07
 Identities = 21/39 (53%), Positives = 26/39 (66%), Gaps = 1/39 (2%)

Query: 93  CEICDKKVGSIELKCR-CGHLYCGTHRYPKEHACTFDFK 130
           C  C KKVG    KCR CG+L+CG HR P++H C  D+K
Sbjct: 1   CHFCRKKVGLTGFKCRHCGNLFCGEHRLPEDHDCPGDYK 39

Zinc finger at the C-terminus of An1, a ubiquitin-like protein in Xenopus laevis. Length = 39

>gnl|CDD|201955 pfam01754, zf-A20, A20-like zinc finger

 Score = 39.9 bits (94), Expect = 1e-05
 Identities = 13/25 (52%), Positives = 16/25 (64%)

Query: 3  PPLCAKGCGFYGTKEHKSMCSKCYN 27
          P  C  GCGFYG+   + +CSKCY 
Sbjct: 1  PLKCTPGCGFYGSPATEGLCSKCYR 25

The A20 Zn-finger of bovine/human Rabex5/rabGEF1 is a Ubiquitin Binding Domain. The zinc finger mediates self-association in A20. These fingers also mediate IL-1-induced NF-kappa B activation. Length = 25

>gnl|CDD|201791 pfam01428, zf-AN1, AN1-like Zinc finger

 Score = 37.8 bits (88), Expect = 8e-05
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 96  CDKKVGSIELKCR-CGHLYCGTHRYPKEHACTFDFKK 131
           C KK   +  KCR CG  +C  HR P++H C   +K 
Sbjct: 6   CKKKDF-LPFKCRFCGGTFCLKHRLPEDHNCPGLYKS 41

Zinc finger at the C-terminus of An1, a ubiquitin-like protein in Xenopus laevis. The following pattern describes the zinc finger. C-X2-C-X(9-12)-C-X(1-2)-C-X4-C-X2-H-X5-H-X-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Length = 43

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	153
KOG3173	167	consensus Predicted Zn-finger protein [General fun	100.0
smart00154	39	ZnF_AN1 AN1-like Zinc finger. Zinc finger at the C	99.55
PF01754	25	zf-A20: A20-like zinc finger; InterPro: IPR002653	99.54
smart00259	26	ZnF_A20 A20-like zinc fingers. A20- (an inhibitor	99.48
PF01428	43	zf-AN1: AN1-like Zinc finger; InterPro: IPR000058	99.11
COG3582	162	Predicted nucleic acid binding protein containing	96.44
KOG3183	250	consensus Predicted Zn-finger protein [General fun	96.3
PF01363	69	FYVE: FYVE zinc finger; InterPro: IPR000306 Zinc f	93.89
KOG3183	250	consensus Predicted Zn-finger protein [General fun	92.91
cd00065	57	FYVE FYVE domain; Zinc-binding domain; targets pro	92.28
smart00064	68	FYVE Protein present in Fab1, YOTB, Vac1, and EEA1	91.19
KOG1818	634	consensus Membrane trafficking and cell signaling	87.66
PF10571	26	UPF0547: Uncharacterised protein family UPF0547; I	87.05
PF00130	53	C1_1: Phorbol esters/diacylglycerol binding domain	86.28
PF15135	278	UPF0515: Uncharacterised protein UPF0515	80.43

>KOG3173 consensus Predicted Zn-finger protein [General function prediction only]

Probab=100.00  E-value=8.4e-46  Score=294.42  Aligned_cols=148  Identities=36%  Similarity=0.793  Sum_probs=101.0

Q ss_pred             ccccccCCCCCCccccCCcchhhhhHHHHhhhcc-ccccCccccCCCCCCcccc-CCCCC--C-CCCCCCCCcccccccc
Q 038787            3 PPLCAKGCGFYGTKEHKSMCSKCYNDFLEEQVTD-GVVKRPLKLMQPNPSILVF-DPRSL--Q-SPSCSSSERTTIDSAA   77 (153)
Q Consensus         3 p~lC~n~CGFfGs~at~~~CSkCy~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~--~-~~~~~~~~~~~~~~~~   77 (153)
                      ++||+|||||||+|+|+||||+||++++.++++. ......+......+..... .....  . ....+.+... ..++.
T Consensus        15 ~~lc~~gCGf~G~p~~~n~CSkC~~e~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~~~s~   93 (167)
T KOG3173|consen   15 DLLCVNGCGFYGSPATENLCSKCYRDHLLRQQQKQARASPPVESSLSSPRSVPSRDPPAVSLESTTESELKLVS-DTPST   93 (167)
T ss_pred             ccccccCccccCChhhccHHHHHHHHHHHHhhhccccccCcccccccCccccCccccccccccccccccccccc-cCCcc
Confidence            4899999999999999999999999999988765 2222211110000000000 00000  0 0000000000 00111


Q ss_pred             cccCCCCCccccccccccccccccccceeeecCceecCCCCCCCCCCCcccchhhhHHHHHHhCCceeccccccCC
Q 038787           78 VECSSGKTTSALEKRCEICDKKVGSIELKCRCGHLYCGTHRYPKEHACTFDFKKFDRETLVEDDPLIRADKLEGRI  153 (153)
Q Consensus        78 ~~~~~~~~~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~l~k~Np~v~~~Kl~~kI  153 (153)
                       ..++.......++||..|+|||||+||.||||++||+.|||||.|+|+||||.+||+.|+++||+|+++||+ ||
T Consensus        94 -~~~~~~~~~~~~~rC~~C~kk~gltgf~CrCG~~fC~~HRy~e~H~C~fDyK~~gr~~i~k~nP~v~a~k~~-ki  167 (167)
T KOG3173|consen   94 -EEEDEESKPKKKKRCFKCRKKVGLTGFKCRCGNTFCGTHRYPEQHDCSFDYKQAGREKIAKANPVVKADKLQ-KI  167 (167)
T ss_pred             -cccccccccccchhhhhhhhhhcccccccccCCcccccccCCccccccccHHHHHHHHHHHhCCeeeccccc-cC
Confidence             111112223467899999999999999999999999999999999999999999999999999999999999 98

>smart00154 ZnF_AN1 AN1-like Zinc finger

Probab=99.55  E-value=1.7e-15  Score=94.85  Aligned_cols=38  Identities=55%  Similarity=1.332  Sum_probs=36.8

Q ss_pred             cccccccccccceeee-cCceecCCCCCCCCCCCcccch
Q 038787           93 CEICDKKVGSIELKCR-CGHLYCGTHRYPKEHACTFDFK  130 (153)
Q Consensus        93 C~~C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk  130 (153)
                      |+.|+++++|++|+|+ |+++||+.||+||+|+|++|||
T Consensus         1 C~~C~~~~~l~~f~C~~C~~~FC~~HR~~e~H~C~~~~k   39 (39)
T smart00154        1 CHFCRKKVGLTGFKCRHCGNLFCGEHRLPEDHDCPGDYK   39 (39)
T ss_pred             CcccCCcccccCeECCccCCccccccCCccccCCccccC
Confidence            7899999999999999 9999999999999999999996

Zinc finger at the C-terminus of An1, a ubiquitin-like protein in Xenopus laevis.

>PF01754 zf-A20: A20-like zinc finger; InterPro: IPR002653 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=99.54  E-value=2e-15  Score=86.84  Aligned_cols=25  Identities=60%  Similarity=1.516  Sum_probs=21.0

Q ss_pred             ccccccCCCCCCccccCCcchhhhh
Q 038787            3 PPLCAKGCGFYGTKEHKSMCSKCYN   27 (153)
Q Consensus         3 p~lC~n~CGFfGs~at~~~CSkCy~   27 (153)
                      |++|++|||||||++|+||||+|||
T Consensus         1 ~~~C~~gCgf~Gs~~~~~~Cs~C~~   25 (25)
T PF01754_consen    1 PSLCANGCGFYGSPATNGLCSKCYR   25 (25)
T ss_dssp             SSB-TTTSSSB-BGGGTTS-HHHHH
T ss_pred             CCcccCCCCCcccccccCcchhhcC
Confidence            6799999999999999999999997

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the zinc finger domain found in A20. A20 is an inhibitor of cell death that inhibits NF-kappaB activation via the tumour necrosis factor receptor associated factor pathway []. The zinc finger domains appear to mediate self-association in A20. These fingers also mediate IL-1-induced NF-kappa B activation. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding, 0008270 zinc ion binding; PDB: 2FIF_F 2FID_B 2C7N_C 2C7M_A 2L00_A 2KZY_A 2EQG_A 2EQE_A 3OJ3_J 3OJ4_C ....

>smart00259 ZnF_A20 A20-like zinc fingers

Probab=99.48  E-value=9.1e-15  Score=84.76  Aligned_cols=25  Identities=44%  Similarity=1.263  Sum_probs=23.6

Q ss_pred             ccccc-cCCCCCCccccCCcchhhhh
Q 038787            3 PPLCA-KGCGFYGTKEHKSMCSKCYN   27 (153)
Q Consensus         3 p~lC~-n~CGFfGs~at~~~CSkCy~   27 (153)
                      |++|+ +||||||||+|+|||||||+
T Consensus         1 ~~~C~~~~CgF~G~~~t~~~CskCy~   26 (26)
T smart00259        1 PIKCRRPGCGFFGNPATEGLCSKCFK   26 (26)
T ss_pred             CCccccCCCCCcCChhhcccCHhhcC
Confidence            56899 99999999999999999996

A20- (an inhibitor of cell death)-like zinc fingers. The zinc finger mediates self-association in A20. These fingers also mediate IL-1-induced NF-kappaB activation.

>PF01428 zf-AN1: AN1-like Zinc finger; InterPro: IPR000058 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=99.11  E-value=2.3e-11  Score=77.05  Aligned_cols=38  Identities=42%  Similarity=0.973  Sum_probs=28.2

Q ss_pred             ccc--ccccccccceeee-cCceecCCCCCCCCCCCcccchh
Q 038787           93 CEI--CDKKVGSIELKCR-CGHLYCGTHRYPKEHACTFDFKK  131 (153)
Q Consensus        93 C~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk~  131 (153)
                      |+.  |++++. ++|.|+ |+..||..|||||.|+|+.+++.
T Consensus         1 C~~~~C~~~~~-~~~~C~~C~~~FC~~Hr~~e~H~C~~~~~~   41 (43)
T PF01428_consen    1 CSFPGCKKKDF-LPFKCKHCGKSFCLKHRLPEDHNCSKLQKK   41 (43)
T ss_dssp             -SSTTT--BCT-SHEE-TTTS-EE-TTTHSTTTCT-SSTTSC
T ss_pred             CccCcCcCccC-CCeECCCCCcccCccccCccccCCcchhhc
Confidence            455  998888 799999 99999999999999999999874

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the AN1-type zinc finger domain, which has a dimetal (zinc)-bound alpha/beta fold. This domain was first identified as a zinc finger at the C terminus of AN1 Q91889 from SWISSPROT, a ubiquitin-like protein in Xenopus laevis []. The AN1-type zinc finger contains six conserved cysteines and two histidines that could potentially coordinate 2 zinc atoms. Certain stress-associated proteins (SAP) contain AN1 domain, often in combination with A20 zinc finger domains (SAP8) or C2H2 domains (SAP16) []. For example, the human protein Znf216 has an A20 zinc-finger at the N terminus and an AN1 zinc-finger at the C terminus, acting to negatively regulate the NFkappaB activation pathway and to interact with components of the immune response like RIP, IKKgamma and TRAF6. The interact of Znf216 with IKK-gamma and RIP is mediated by the A20 zinc-finger domain, while its interaction with TRAF6 is mediated by the AN1 zinc-finger domain; therefore, both zinc-finger domains are involved in regulating the immune response []. The AN1 zinc finger domain is also found in proteins containing a ubiquitin-like domain, which are involved in the ubiquitination pathway []. Proteins containing an AN1-type zinc finger include: Ascidian posterior end mark 6 (pem-6) protein []. Human AWP1 protein (associated with PRK1), which is expressed during early embryogenesis []. Human immunoglobulin mu binding protein 2 (SMUBP-2), mutations in which cause muscular atrophy with respiratory distress type 1 []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding; PDB: 1WFP_A 1WYS_A 1WG2_A 1WFH_A 1X4W_A 1WFE_A 1WFL_A 1X4V_A.

>COG3582 Predicted nucleic acid binding protein containing the AN1-type Zn-finger [General function prediction only]

Probab=96.44  E-value=0.0014  Score=52.70  Aligned_cols=38  Identities=32%  Similarity=0.641  Sum_probs=30.4

Q ss_pred             ccc---cccccccccceeee-cCceecCCCCCCCCCCCcccch
Q 038787           92 RCE---ICDKKVGSIELKCR-CGHLYCGTHRYPKEHACTFDFK  130 (153)
Q Consensus        92 rC~---~C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk  130 (153)
                      +|.   .|++..+| .++|- |++.||+.||.++.|+|.+...
T Consensus        96 ~~a~~~~~g~~s~l-~~~c~~c~g~fc~~h~lp~nhdc~~L~s  137 (162)
T COG3582          96 RCATPQCTGKGSTL-AGKCNYCTGYFCAEHRLPENHDCNGLGS  137 (162)
T ss_pred             eeecceeccCCccc-cccccCCCCcceeceecccccccccHHH
Confidence            555   44444444 67999 9999999999999999998865

>KOG3183 consensus Predicted Zn-finger protein [General function prediction only]

Probab=96.30  E-value=0.0013  Score=55.92  Aligned_cols=41  Identities=27%  Similarity=0.764  Sum_probs=36.1

Q ss_pred             ccccc--cccccccccceeee-cCceecCCCCCCCCCCCcccchh
Q 038787           90 EKRCE--ICDKKVGSIELKCR-CGHLYCGTHRYPKEHACTFDFKK  131 (153)
Q Consensus        90 ~~rC~--~C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk~  131 (153)
                      ...|.  .|+ ++.++.|+|- |+.+||..||--+.|.|.+-+..
T Consensus         8 GkHCs~~~Ck-qlDFLPf~Cd~C~~~FC~eHrsye~H~Cp~~~~~   51 (250)
T KOG3183|consen    8 GKHCSVPYCK-QLDFLPFKCDGCSGIFCLEHRSYESHHCPKGLRI   51 (250)
T ss_pred             ccccCcchhh-hccccceeeCCccchhhhccchHhhcCCCccccc
Confidence            35777  786 6689999999 99999999999999999998863

>PF01363 FYVE: FYVE zinc finger; InterPro: IPR000306 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=93.89  E-value=0.039  Score=36.89  Aligned_cols=30  Identities=33%  Similarity=0.834  Sum_probs=18.1

Q ss_pred             ccccccccccccccc--ceeee-cCceecCCCC
Q 038787           89 LEKRCEICDKKVGSI--ELKCR-CGHLYCGTHR  118 (153)
Q Consensus        89 ~~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~HR  118 (153)
                      ....|..|+++.+|+  -..|| ||.+||+.+-
T Consensus         8 ~~~~C~~C~~~F~~~~rrhhCr~CG~~vC~~Cs   40 (69)
T PF01363_consen    8 EASNCMICGKKFSLFRRRHHCRNCGRVVCSSCS   40 (69)
T ss_dssp             G-SB-TTT--B-BSSS-EEE-TTT--EEECCCS
T ss_pred             CCCcCcCcCCcCCCceeeEccCCCCCEECCchh
Confidence            467999999999995  58999 9999997653

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The FYVE zinc finger is named after four proteins that it has been found in: Fab1, YOTB/ZK632.12, Vac1, and EEA1. The FYVE finger has been shown to bind two zinc ions []. The FYVE finger has eight potential zinc coordinating cysteine positions. Many members of this family also include two histidines in a motif R+HHC+XCG, where + represents a charged residue and X any residue. FYVE-type domains are divided into two known classes: FYVE domains that specifically bind to phosphatidylinositol 3-phosphate in lipid bilayers and FYVE-related domains of undetermined function []. Those that bind to phosphatidylinositol 3-phosphate are often found in proteins targeted to lipid membranes that are involved in regulating membrane traffic [, , ]. Most FYVE domains target proteins to endosomes by binding specifically to phosphatidylinositol-3-phosphate at the membrane surface. By contrast, the CARP2 FYVE-like domain is not optimized to bind to phosphoinositides or insert into lipid bilayers. FYVE domains are distinguished from other zinc fingers by three signature sequences: an N-terminal WxxD motif, a basic R(R/K)HHCR patch, and a C-terminal RVC motif. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0046872 metal ion binding; PDB: 1HYI_A 1JOC_B 1HYJ_A 1DVP_A 3ZYQ_A 4AVX_A 1VFY_A 3T7L_A 1X4U_A 1WFK_A ....

>KOG3183 consensus Predicted Zn-finger protein [General function prediction only]

Probab=92.91  E-value=0.023  Score=48.48  Aligned_cols=41  Identities=29%  Similarity=0.839  Sum_probs=34.3

Q ss_pred             cccccccc--ccccccccc-ceeee-cCceecCCCCCCCCCCCcc
Q 038787           87 SALEKRCE--ICDKKVGSI-ELKCR-CGHLYCGTHRYPKEHACTF  127 (153)
Q Consensus        87 ~~~~~rC~--~C~kkvgl~-gf~Cr-Cg~~FC~~HRy~e~H~C~f  127 (153)
                      +...++|.  .|++++-|. .+.|+ ||..||-+||++-.|.|.-
T Consensus        95 k~~t~kc~~~~c~k~~~~~~~~~c~~c~~~~c~khr~~~dhsc~~  139 (250)
T KOG3183|consen   95 KVFTNKCPVPRCKKTLTLANKITCSKCGRNFCLKHRHPLDHSCNK  139 (250)
T ss_pred             ccccccCCchhhHHHHHHHHhhhhHhhcchhhhhccCCCCchhhh
Confidence            34567777  688887774 69999 9999999999999999983

>cd00065 FYVE FYVE domain; Zinc-binding domain; targets proteins to membrane lipids via interaction with phosphatidylinositol-3-phosphate, PI3P; present in Fab1, YOTB, Vac1, and EEA1;

Probab=92.28  E-value=0.055  Score=34.72  Aligned_cols=28  Identities=29%  Similarity=0.807  Sum_probs=24.0

Q ss_pred             ccccccccccccc--ceeee-cCceecCCCC
Q 038787           91 KRCEICDKKVGSI--ELKCR-CGHLYCGTHR  118 (153)
Q Consensus        91 ~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~HR  118 (153)
                      ..|..|+++.++.  ...|| ||.+||+.+-
T Consensus         3 ~~C~~C~~~F~~~~rk~~Cr~Cg~~~C~~C~   33 (57)
T cd00065           3 SSCMGCGKPFTLTRRRHHCRNCGRIFCSKCS   33 (57)
T ss_pred             CcCcccCccccCCccccccCcCcCCcChHHc
Confidence            5799999999994  69999 9999998543

>smart00064 FYVE Protein present in Fab1, YOTB, Vac1, and EEA1

Probab=91.19  E-value=0.082  Score=35.23  Aligned_cols=29  Identities=28%  Similarity=0.801  Sum_probs=24.5

Q ss_pred             cccccccccccccc--ceeee-cCceecCCCC
Q 038787           90 EKRCEICDKKVGSI--ELKCR-CGHLYCGTHR  118 (153)
Q Consensus        90 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~HR  118 (153)
                      ...|..|++..++.  ...|| ||.+||+.+-
T Consensus        10 ~~~C~~C~~~F~~~~rk~hCr~CG~i~C~~C~   41 (68)
T smart00064       10 VSNCMGCGKEFNLTKRRHHCRNCGRIFCSKCS   41 (68)
T ss_pred             CCcCcccCccccCcccccccccCCCCcChHHc
Confidence            46899999999984  68899 9999997654

The FYVE zinc finger is named after four proteins where it was first found: Fab1, YOTB/ZK632.12, Vac1, and EEA1. The FYVE finger has been shown to bind two Zn2+ ions. The FYVE finger has eight potential zinc coordinating cysteine positions. The FYVE finger is structurally related to the

>KOG1818 consensus Membrane trafficking and cell signaling protein HRS, contains VHS and FYVE domains [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=87.66  E-value=0.21  Score=47.64  Aligned_cols=42  Identities=26%  Similarity=0.683  Sum_probs=33.4

Q ss_pred             cccccccccccccccc--eeee-cCceecCCCC-----------CCCCCCCcccch
Q 038787           89 LEKRCEICDKKVGSIE--LKCR-CGHLYCGTHR-----------YPKEHACTFDFK  130 (153)
Q Consensus        89 ~~~rC~~C~kkvgl~g--f~Cr-Cg~~FC~~HR-----------y~e~H~C~fDyk  130 (153)
                      ....|..|+.+.|+++  ..|| ||.+||+.|-           |-+.--|.-||.
T Consensus       164 D~~~C~rCr~~F~~~~rkHHCr~CG~vFC~qcss~s~~lP~~Gi~~~VRVCd~C~E  219 (634)
T KOG1818|consen  164 DSEECLRCRVKFGLTNRKHHCRNCGQVFCGQCSSKSLTLPKLGIEKPVRVCDSCYE  219 (634)
T ss_pred             cccccceeeeeeeeccccccccccchhhccCccccccCcccccccccceehhhhHH
Confidence            4579999999999974  7999 9999999884           344456777765

>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines

Probab=87.05  E-value=0.28  Score=28.15  Aligned_cols=23  Identities=30%  Similarity=0.668  Sum_probs=20.3

Q ss_pred             cccccccccccccceeee-cCcee
Q 038787           91 KRCEICDKKVGSIELKCR-CGHLY  113 (153)
Q Consensus        91 ~rC~~C~kkvgl~gf~Cr-Cg~~F  113 (153)
                      .+|-.|++.|.+..-.|- ||+.|
T Consensus         1 K~CP~C~~~V~~~~~~Cp~CG~~F   24 (26)
T PF10571_consen    1 KTCPECGAEVPESAKFCPHCGYDF   24 (26)
T ss_pred             CcCCCCcCCchhhcCcCCCCCCCC
Confidence            368899999999999999 99887

Several members are annotated as putative helicases.

>PF00130 C1_1: Phorbol esters/diacylglycerol binding domain (C1 domain); InterPro: IPR002219 Diacylglycerol (DAG) is an important second messenger

Probab=86.28  E-value=0.44  Score=30.13  Aligned_cols=25  Identities=28%  Similarity=0.841  Sum_probs=19.2

Q ss_pred             cccccccccccc---cccceeee-cCcee
Q 038787           89 LEKRCEICDKKV---GSIELKCR-CGHLY  113 (153)
Q Consensus        89 ~~~rC~~C~kkv---gl~gf~Cr-Cg~~F  113 (153)
                      .+..|..|++.|   ++.|++|+ |+.+.
T Consensus        10 ~~~~C~~C~~~i~g~~~~g~~C~~C~~~~   38 (53)
T PF00130_consen   10 KPTYCDVCGKFIWGLGKQGYRCSWCGLVC   38 (53)
T ss_dssp             STEB-TTSSSBECSSSSCEEEETTTT-EE
T ss_pred             CCCCCcccCcccCCCCCCeEEECCCCChH
Confidence            467999999999   66899999 86653

Phorbol esters (PE) are analogues of DAG and potent tumour promoters that cause a variety of physiological changes when administered to both cells and tissues. DAG activates a family of serine/threonine protein kinases, collectively known as protein kinase C (PKC) []. Phorbol esters can directly stimulate PKC. The N-terminal region of PKC, known as C1, has been shown [] to bind PE and DAG in a phospholipid and zinc-dependent fashion. The C1 region contains one or two copies (depending on the isozyme of PKC) of a cysteine-rich domain, which is about 50 amino-acid residues long, and which is essential for DAG/PE-binding. The DAG/PE-binding domain binds two zinc ions; the ligands of these metal ions are probably the six cysteines and two histidines that are conserved in this domain.; GO: 0035556 intracellular signal transduction; PDB: 1RFH_A 2FNF_X 3PFQ_A 1PTQ_A 1PTR_A 2VRW_B 1XA6_A 2ENN_A 1TBN_A 1TBO_A ....

>PF15135 UPF0515: Uncharacterised protein UPF0515

Probab=80.43  E-value=0.89  Score=39.35  Aligned_cols=29  Identities=34%  Similarity=0.818  Sum_probs=23.6

Q ss_pred             ccccccccccccc---------ccccceee-ecCceecC
Q 038787           87 SALEKRCEICDKK---------VGSIELKC-RCGHLYCG  115 (153)
Q Consensus        87 ~~~~~rC~~C~kk---------vgl~gf~C-rCg~~FC~  115 (153)
                      .+.-+||..|+||         .|+--|+| .|+++|=+
T Consensus       129 rKeVSRCr~C~~rYDPVP~dkmwG~aef~C~~C~h~F~G  167 (278)
T PF15135_consen  129 RKEVSRCRKCRKRYDPVPCDKMWGIAEFHCPKCRHNFRG  167 (278)
T ss_pred             ccccccccccccccCCCccccccceeeeecccccccchh
Confidence            3456899999988         67788999 59999954

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	153
1wfp_A	74	Solution Structure Of The Zf-an1 Domain From Arabio		5e-10
1wg2_A	64	Solution Structure Of Zf-An1 Domain From Arabidopsi		1e-09
1wfh_A	64	Solution Structrue Of The Zf-An1 Domain From Arabid		2e-09
1wff_A	85	Solution Structure Of The Zf-An1 Domain From Mouse		2e-08
1wfl_A	74	Solution Structure Of The Zf-An1 Domain From Mouse		2e-07
2kzy_A	62	Solution Nmr Structure Of The Znf216 A20 Zinc Finge		2e-04

>pdb|1WFP|A Chain A, Solution Structure Of The Zf-an1 Domain From Arabiopsis Thaliana F5o11.17 Protein Length = 74

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 25/39 (64%), Positives = 28/39 (71%)
Query: 92  RCEICDKKVGSIELKCRCGHLYCGTHRYPKEHACTFDFK 130
           RC  C+KKVG    KCRCG  +CGTHRYP+ H C FDFK
Sbjct: 27  RCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFK 65

>pdb|1WG2|A Chain A, Solution Structure Of Zf-An1 Domain From Arabidopsis Thaliana Length = 64

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 32/42 (76%)
Query: 90  EKRCEICDKKVGSIELKCRCGHLYCGTHRYPKEHACTFDFKK 131
             RC  C+KKVG +  KC+CG  +CG+HRYP++H C+FDFK+
Sbjct: 15  NNRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKE 56

>pdb|1WFH|A Chain A, Solution Structrue Of The Zf-An1 Domain From Arabidopsis Thaliana At2g36320 Protein Length = 64

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 23/41 (56%), Positives = 28/41 (68%)
Query: 91  KRCEICDKKVGSIELKCRCGHLYCGTHRYPKEHACTFDFKK 131
            RC +C K+VG     CRCG  +CG+HRYP+ H CTFDFK 
Sbjct: 16  NRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKS 56

>pdb|1WFF|A Chain A, Solution Structure Of The Zf-An1 Domain From Mouse Riken Cdna 2810002d23 Protein Length = 85

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 84  KTTSALEKRCEICDKKVG-SIELKCRCGHLYCGTHRYPKEHACTFDFKKFDRETLVEDDP 142
           +T   + K C +C KK G +   +CRCG+ +C +HRY + H C +D+K   R  L E +P
Sbjct: 19  QTKKKIMKHCFLCGKKTGLATSFECRCGNNFCASHRYAEAHGCNYDYKSAGRRYLEEANP 78
Query: 143 L 143
           +
Sbjct: 79  V 79

>pdb|1WFL|A Chain A, Solution Structure Of The Zf-An1 Domain From Mouse Zinc Finger Protein 216 Length = 74

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 21/41 (51%), Positives = 28/41 (68%)
Query: 90  EKRCEICDKKVGSIELKCRCGHLYCGTHRYPKEHACTFDFK 130
           + RC +C KKVG     CRCG+L+CG HRY  +H C +D+K
Sbjct: 25  KNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYK 65

>pdb|2KZY|A Chain A, Solution Nmr Structure Of The Znf216 A20 Zinc Finger Length = 62

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/35 (48%), Positives = 20/35 (57%)
Query: 3  PPLCAKGCGFYGTKEHKSMCSKCYNDFLEEQVTDG 37
          P LC+ GCGFYG      MCS CY + L+ Q   G
Sbjct: 13 PMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSG 47

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	153
1wff_A	85	Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc	3e-18
1wfp_A	74	Zinc finger (AN1-like) family protein; ZF-AN1 doma	7e-17
1wg2_A	64	Zinc finger (AN1-like) family protein; riken struc	3e-16
1wfh_A	64	Zinc finger (AN1-like) family protein; ZF-AN1 doma	3e-16
1wfl_A	74	Zinc finger protein 216; ZF-AN1 domain, zinc bindi	8e-16
1x4w_A	67	Hypothetical protein FLJ13222; ZF-AN1 domain, zinc	1e-14
2kzy_A	62	ZNF216-A20, zfand5 protein (zinc finger protein 21	4e-08
2c7n_A	74	Rabex-5, GEF 1, RAB guanine nucleotide exchange fa	5e-06

>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1 Length = 85

 Score = 73.4 bits (180), Expect = 3e-18
 Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 1/81 (1%)

Query: 67  SSERTTIDSAAVECSSGKTTSALEKRCEICDKKVG-SIELKCRCGHLYCGTHRYPKEHAC 125
           SS  + I       +  +T   + K C +C KK G +   +CRCG+ +C +HRY + H C
Sbjct: 2   SSGSSGIHHLPPVKAPLQTKKKIMKHCFLCGKKTGLATSFECRCGNNFCASHRYAEAHGC 61

Query: 126 TFDFKKFDRETLVEDDPLIRA 146
            +D+K   R  L E +P+   
Sbjct: 62  NYDYKSAGRRYLEEANPVSGP 82

>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1 Length = 74

 Score = 69.6 bits (170), Expect = 7e-17
 Identities = 27/71 (38%), Positives = 33/71 (46%)

Query: 67  SSERTTIDSAAVECSSGKTTSALEKRCEICDKKVGSIELKCRCGHLYCGTHRYPKEHACT 126
           SS  +         +      +   RC  C+KKVG    KCRCG  +CGTHRYP+ H C 
Sbjct: 2   SSGSSGTRGGDSAAAPLDPPKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQ 61

Query: 127 FDFKKFDRETL 137
           FDFK       
Sbjct: 62  FDFKGVASGPS 72

>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1 Length = 64

 Score = 67.5 bits (165), Expect = 3e-16
 Identities = 24/62 (38%), Positives = 34/62 (54%)

Query: 76  AAVECSSGKTTSALEKRCEICDKKVGSIELKCRCGHLYCGTHRYPKEHACTFDFKKFDRE 135
            +   S          RC  C+KKVG +  KC+CG  +CG+HRYP++H C+FDFK+    
Sbjct: 1   GSSGSSGPSRPVRPNNRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVGSG 60

Query: 136 TL 137
             
Sbjct: 61  PS 62

>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1 Length = 64

 Score = 67.5 bits (165), Expect = 3e-16
 Identities = 24/62 (38%), Positives = 31/62 (50%)

Query: 76  AAVECSSGKTTSALEKRCEICDKKVGSIELKCRCGHLYCGTHRYPKEHACTFDFKKFDRE 135
            +   S   +      RC +C K+VG     CRCG  +CG+HRYP+ H CTFDFK     
Sbjct: 1   GSSGSSGQPSPPQRPNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGSG 60

Query: 136 TL 137
             
Sbjct: 61  PS 62

>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1 Length = 74

 Score = 66.9 bits (163), Expect = 8e-16
 Identities = 25/68 (36%), Positives = 36/68 (52%)

Query: 67  SSERTTIDSAAVECSSGKTTSALEKRCEICDKKVGSIELKCRCGHLYCGTHRYPKEHACT 126
           SS  +   S+  E  + +     + RC +C KKVG     CRCG+L+CG HRY  +H C 
Sbjct: 2   SSGSSGPSSSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCP 61

Query: 127 FDFKKFDR 134
           +D+K    
Sbjct: 62  YDYKAEAS 69

>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 67

 Score = 63.5 bits (154), Expect = 1e-14
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 3/65 (4%)

Query: 76  AAVECSSGKTTSALEKRCEICDKKVGSIE---LKCRCGHLYCGTHRYPKEHACTFDFKKF 132
            +   S  ++     +RC  C  K+  ++     CRCG+++C  HR P++H CTFD    
Sbjct: 1   GSSGSSGSRSKQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGR 60

Query: 133 DRETL 137
                
Sbjct: 61  GSGPS 65

>2kzy_A ZNF216-A20, zfand5 protein (zinc finger protein 216 (predicte isoform CRA_A); A20 domain, atrogene, metal binding Pro; NMR {Rattus norvegicus} PDB: 2l00_A Length = 62

 Score = 46.6 bits (110), Expect = 4e-08
 Identities = 16/32 (50%), Positives = 19/32 (59%)

Query: 2  TPPLCAKGCGFYGTKEHKSMCSKCYNDFLEEQ 33
           P LC+ GCGFYG      MCS CY + L+ Q
Sbjct: 12 GPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQ 43

>2c7n_A Rabex-5, GEF 1, RAB guanine nucleotide exchange factor 1; protein-binding, ubiquitin binding domain, endocytosis, NUCL protein, polyprotein; 2.1A {Homo sapiens} SCOP: g.39.1.15 PDB: 2c7m_A 2fif_B 2fid_B Length = 74

 Score = 41.4 bits (96), Expect = 5e-06
 Identities = 12/31 (38%), Positives = 17/31 (54%)

Query: 3  PPLCAKGCGFYGTKEHKSMCSKCYNDFLEEQ 33
            LC KGCG+YG    +  CSKC+ +   + 
Sbjct: 16 DLLCKKGCGYYGNPAWQGFCSKCWREEYHKA 46

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	153
1wff_A	85	Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc	99.96
1wfh_A	64	Zinc finger (AN1-like) family protein; ZF-AN1 doma	99.93
1wg2_A	64	Zinc finger (AN1-like) family protein; riken struc	99.92
1wfl_A	74	Zinc finger protein 216; ZF-AN1 domain, zinc bindi	99.92
1wfp_A	74	Zinc finger (AN1-like) family protein; ZF-AN1 doma	99.91
1x4w_A	67	Hypothetical protein FLJ13222; ZF-AN1 domain, zinc	99.9
2kzy_A	62	ZNF216-A20, zfand5 protein (zinc finger protein 21	99.69
2c7n_A	74	Rabex-5, GEF 1, RAB guanine nucleotide exchange fa	99.61
3oj3_I	49	Tumor necrosis factor alpha-induced protein 3; ubi	99.58
1wfe_A	86	Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc	99.35
1x4v_A	63	Hypothetical protein LOC130617; ZF-AN1 domain, zin	99.31
1wys_A	75	Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc	99.25
2eqe_A	48	Tumor necrosis factor, alpha-induced protein 3; ZF	97.87
1vfy_A	73	Phosphatidylinositol-3-phosphate binding FYVE doma	92.85
2yw8_A	82	RUN and FYVE domain-containing protein 1; structur	91.96
1joc_A	125	EEA1, early endosomal autoantigen 1; FYVE domain,	91.55
1wfk_A	88	Zinc finger, FYVE domain containing 19; riken stru	91.53
3zyq_A	226	Hepatocyte growth factor-regulated tyrosine kinas	91.32
1x4u_A	84	Zinc finger, FYVE domain containing 27 isoform B;	91.16
1z2q_A	84	LM5-1; membrane protein, FYVE domain, zinc-finger;	90.78
1dvp_A	220	HRS, hepatocyte growth factor-regulated tyrosine k	90.72
3t7l_A	90	Zinc finger FYVE domain-containing protein 16; str	90.12
1y02_A	120	CARP2, FYVE-ring finger protein sakura; zinc-bindi	87.85
4b6d_A	61	RAC GTPase-activating protein 1; signaling protein	86.67
2vrw_B	406	P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP	84.41
2eqf_A	46	Tumor necrosis factor, alpha-induced protein 3; ZF	80.07

>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1

Probab=99.96  E-value=1.3e-30  Score=186.97  Aligned_cols=61  Identities=36%  Similarity=0.893  Sum_probs=58.3

Q ss_pred             ccccccccccccccccc-ceeeecCceecCCCCCCCCCCCcccchhhhHHHHHHhCCceecc
Q 038787           87 SALEKRCEICDKKVGSI-ELKCRCGHLYCGTHRYPKEHACTFDFKKFDRETLVEDDPLIRAD  147 (153)
Q Consensus        87 ~~~~~rC~~C~kkvgl~-gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~l~k~Np~v~~~  147 (153)
                      ++.++||+.|+|||||+ +|+||||++||+.|||||+|+|+||||++||++|+|+||+|+++
T Consensus        22 k~~~~rC~~C~kkvgl~~~f~CrCg~~FC~~HRy~e~H~C~fDyK~~gr~~iak~NPvV~a~   83 (85)
T 1wff_A           22 KKIMKHCFLCGKKTGLATSFECRCGNNFCASHRYAEAHGCNYDYKSAGRRYLEEANPVSGPS   83 (85)
T ss_dssp             CCCCCBCSSSCCBCSSSSCEECTTCCEECTTTCSTGGGTCCSCCSSSCCCCCCCCCCCCCTT
T ss_pred             cccCccchhhCCeecccCCeEcCCCCEecccCCCccCCCCcchhhHHHHHHHHHHCCeecCC
Confidence            45689999999999995 99999999999999999999999999999999999999999986

>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1

Probab=99.93  E-value=1.6e-27  Score=163.05  Aligned_cols=53  Identities=43%  Similarity=1.011  Sum_probs=49.8

Q ss_pred             ccccccccccccccccccceeeecCceecCCCCCCCCCCCcccchhhhHHHHH
Q 038787           86 TSALEKRCEICDKKVGSIELKCRCGHLYCGTHRYPKEHACTFDFKKFDRETLV  138 (153)
Q Consensus        86 ~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~l~  138 (153)
                      ++..++||+.|+|||||++|+||||++||+.|||||+|+|+||||++||++|+
T Consensus        11 ~k~~~~rC~~C~kkvgl~~f~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~l~   63 (64)
T 1wfh_A           11 PPQRPNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGSGPSS   63 (64)
T ss_dssp             CCSSCCCCTTTCCCCCTTCEECSSSCEECTTTCSTTTTTCCCCCSCCCCSCCC
T ss_pred             CCCcCCcChhhCCccCccCEEeecCCEeccccCCcccCCCCchhhHHHHHHhc
Confidence            34568999999999999999999999999999999999999999999999875

>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1

Probab=99.92  E-value=6.1e-27  Score=160.22  Aligned_cols=52  Identities=44%  Similarity=1.074  Sum_probs=48.8

Q ss_pred             ccccccccccccccccccceeeecCceecCCCCCCCCCCCcccchhhhHHHH
Q 038787           86 TSALEKRCEICDKKVGSIELKCRCGHLYCGTHRYPKEHACTFDFKKFDRETL  137 (153)
Q Consensus        86 ~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~l  137 (153)
                      ++..++||+.|+|||||++|+||||++||+.|||||+|+|+||||++||++|
T Consensus        11 ~~~~~~rC~~C~kkvgl~~f~CrCg~~FC~~HR~~e~H~C~fDyk~~gr~~~   62 (64)
T 1wg2_A           11 PVRPNNRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVGSGPS   62 (64)
T ss_dssp             CSCCSCSCTTTCCCCTTSCEECTTSCEECSSSCSSTTTTCCCCCSCSCCCSC
T ss_pred             CCCcCCcChhhCCcccccCeEeecCCEecccCCCccccCCCcchhHHhHHHh
Confidence            3346799999999999999999999999999999999999999999999887

>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1

Probab=99.92  E-value=4.9e-26  Score=159.53  Aligned_cols=51  Identities=41%  Similarity=1.004  Sum_probs=47.5

Q ss_pred             ccccccccccccccccccceeeecCceecCCCCCCCCCCCcccchhhhHHH
Q 038787           86 TSALEKRCEICDKKVGSIELKCRCGHLYCGTHRYPKEHACTFDFKKFDRET  136 (153)
Q Consensus        86 ~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~  136 (153)
                      .+..++||+.|+|||||++|.||||++||+.|||+|+|+|+||||++||++
T Consensus        21 ~k~~~nRC~~CrKkvgL~gf~CrCg~~FCs~HRy~e~H~C~fDyk~~gr~~   71 (74)
T 1wfl_A           21 PKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEASGP   71 (74)
T ss_dssp             CCSCTTBCSSSCCBCGGGCEECTTSCEECSSSCSTTTTTCCCCGGGTSSCC
T ss_pred             CCCcCCcChhhCCcccccCeecCCCCEechhcCCCccCCCcchhhhhchhh
Confidence            344689999999999999999999999999999999999999999999874

>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1

Probab=99.91  E-value=6.9e-26  Score=158.80  Aligned_cols=52  Identities=48%  Similarity=1.061  Sum_probs=49.1

Q ss_pred             ccccccccccccccccccceeeecCceecCCCCCCCCCCCcccchhhhHHHH
Q 038787           86 TSALEKRCEICDKKVGSIELKCRCGHLYCGTHRYPKEHACTFDFKKFDRETL  137 (153)
Q Consensus        86 ~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~l  137 (153)
                      +++.++||+.|+|+|||++|+||||++||+.|||||+|+|+||||++||++|
T Consensus        21 ~k~~~~RC~~C~kkvgL~~f~CrCg~~FCs~HRy~e~H~C~fDyk~~gr~~~   72 (74)
T 1wfp_A           21 PKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVASGPS   72 (74)
T ss_dssp             TTCCCCBCSSSCCBCTTTCEECTTSCEECTTTCSTTTSCCCSCTTSCCCCCC
T ss_pred             CcccCccchhhcCcccccceEeccCCEeccccCCCcCCCCcCchhHHhHHhh
Confidence            4557899999999999999999999999999999999999999999999876

>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.90  E-value=8.6e-26  Score=155.76  Aligned_cols=52  Identities=33%  Similarity=0.743  Sum_probs=48.1

Q ss_pred             ccccccccccccccccccc---eeeecCceecCCCCCCCCCCCcccchhhhHHHH
Q 038787           86 TSALEKRCEICDKKVGSIE---LKCRCGHLYCGTHRYPKEHACTFDFKKFDRETL  137 (153)
Q Consensus        86 ~~~~~~rC~~C~kkvgl~g---f~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~l  137 (153)
                      +++.++||+.|+|||||++   |+||||++||+.|||||+|+|+||||++||+.|
T Consensus        11 ~~~~~~rC~~C~kk~gL~~~egf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~~   65 (67)
T 1x4w_A           11 KQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGSGPS   65 (67)
T ss_dssp             SCSCTTBCSSSCCBCCHHHHHHHCCSSSCCCCTTTCSTGGGTCSSCSSCSSCCCC
T ss_pred             CCccCCcchhhCCeecccccCceEecCCCEehhccCCccccCCcccccccccccc
Confidence            4556899999999999984   999999999999999999999999999999865

>2kzy_A ZNF216-A20, zfand5 protein (zinc finger protein 216 (predicte isoform CRA_A); A20 domain, atrogene, metal binding Pro; NMR {Rattus norvegicus} PDB: 2l00_A

Probab=99.69  E-value=1.2e-17  Score=113.50  Aligned_cols=37  Identities=46%  Similarity=1.080  Sum_probs=32.6

Q ss_pred             CccccccCCCCCCccccCCcchhhhhHHHHhhhcccc
Q 038787            2 TPPLCAKGCGFYGTKEHKSMCSKCYNDFLEEQVTDGV   38 (153)
Q Consensus         2 ~p~lC~n~CGFfGs~at~~~CSkCy~~~~~~~~~~~~   38 (153)
                      .|+||+|||||||||+|+||||||||+.+.+++++..
T Consensus        12 ~~~lC~ngCGFfGnpaT~nlCSkCyr~~~~~~~~~~~   48 (62)
T 2kzy_A           12 GPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGR   48 (62)
T ss_dssp             CCCBCTTCCSSBCCTTTTSCCHHHHHHHHHHHHHHCC
T ss_pred             cccchhhCCCCcCChhhcCcCHHHHHHHHHhhhcccc
Confidence            4689999999999999999999999999877766543

>2c7n_A Rabex-5, GEF 1, RAB guanine nucleotide exchange factor 1; protein-binding, ubiquitin binding domain, endocytosis, NUCL protein, polyprotein; 2.1A {Homo sapiens} SCOP: g.39.1.15 PDB: 2c7m_A 2fif_B 2fid_B

Probab=99.61  E-value=1.6e-16  Score=111.03  Aligned_cols=32  Identities=38%  Similarity=1.005  Sum_probs=26.9

Q ss_pred             CccccccCCCCCCccccCCcchhhhhHHHHhh
Q 038787            2 TPPLCAKGCGFYGTKEHKSMCSKCYNDFLEEQ   33 (153)
Q Consensus         2 ~p~lC~n~CGFfGs~at~~~CSkCy~~~~~~~   33 (153)
                      .|+||+|||||||||+|+||||||||+.+.++
T Consensus        15 ~~~lC~ngCGFfGnpaT~nlCSkCyrd~~~k~   46 (74)
T 2c7n_A           15 SDLLCKKGCGYYGNPAWQGFCSKCWREEYHKA   46 (74)
T ss_dssp             ---CCTTCSSSCCCGGGTTCCHHHHHHHHHHH
T ss_pred             cchhHHhCCCCCCChhhcCccHHHHHHHHHHH
Confidence            46799999999999999999999999986544

>3oj3_I Tumor necrosis factor alpha-induced protein 3; ubiquitin, zinc finger, zinc ION, protein binding-hydrolase; 2.50A {Homo sapiens} PDB: 3oj4_C

Probab=99.58  E-value=5.2e-16  Score=100.64  Aligned_cols=29  Identities=34%  Similarity=1.000  Sum_probs=27.0

Q ss_pred             cccc-cCCCCCCccccCCcchhhhhHHHHh
Q 038787            4 PLCA-KGCGFYGTKEHKSMCSKCYNDFLEE   32 (153)
Q Consensus         4 ~lC~-n~CGFfGs~at~~~CSkCy~~~~~~   32 (153)
                      .||+ |||||||||+|+|||||||||++..
T Consensus        19 ~lC~~ngCGFfG~p~t~n~CSkCyre~~en   48 (49)
T 3oj3_I           19 SKCRKAGCVYFGTPENKGFCTLCFIEYREN   48 (49)
T ss_dssp             CBCSSTTCSSBCBGGGTTBCHHHHHHHHHH
T ss_pred             cccccCCCCCccCcccCCcchHHHHHHHHc
Confidence            6999 9999999999999999999998763

>1wfe_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1

Probab=99.35  E-value=1.5e-13  Score=98.37  Aligned_cols=58  Identities=16%  Similarity=0.363  Sum_probs=47.9

Q ss_pred             ccccccccc--ccccccccceeee-cCceecCCCCCCCCCCCcccchhhhHHHHHHhCCceeccccccCC
Q 038787           87 SALEKRCEI--CDKKVGSIELKCR-CGHLYCGTHRYPKEHACTFDFKKFDRETLVEDDPLIRADKLEGRI  153 (153)
Q Consensus        87 ~~~~~rC~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk~~~r~~l~k~Np~v~~~Kl~~kI  153 (153)
                      +..++||..  |+++ +|++|.|+ |+.+||..|||+++|+|+..       .+.+.++...+.++. +|
T Consensus        22 ~~~~~~C~~~~Ck~~-~~l~f~C~~C~~~FC~~HR~~e~H~C~~~-------~~~k~~~~~~~~l~~-~~   82 (86)
T 1wfe_A           22 EHKSYSCSFKGCTDV-ELVAVICPYCEKNFCLRHRHQSDHDCEKL-------EVAKPRMAATQKLVR-SG   82 (86)
T ss_dssp             CSCCEECCSTTCCCE-ESSCEECTTTCCEECGGGCSTGGGTCSSS-------SCCCSSCCCCCCCSS-CS
T ss_pred             CCCCCCCCCcCCCCC-CccceECCCCCcccccccCCccCCCCCCC-------cccccchHHHHHHHH-HH
Confidence            345789999  9998 88999999 99999999999999999975       235667777766665 44

>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.31  E-value=4e-13  Score=91.32  Aligned_cols=40  Identities=30%  Similarity=0.851  Sum_probs=36.7

Q ss_pred             ccccccccc--ccccccccceeee-cCceecCCCCCCCCCCCcc
Q 038787           87 SALEKRCEI--CDKKVGSIELKCR-CGHLYCGTHRYPKEHACTF  127 (153)
Q Consensus        87 ~~~~~rC~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~f  127 (153)
                      +...+||..  |+++ +|++|.|+ |+.+||..|||+|+|+|+-
T Consensus         9 k~~~~~Cs~~~Ck~~-~ll~f~C~~C~~~FC~~HR~~e~H~C~~   51 (63)
T 1x4v_A            9 KIFTNKCERAGCRQR-EMMKLTCERCSRNFCIKHRHPLDHDCSG   51 (63)
T ss_dssp             CTTCCCCCSTTCCCC-CSSCCBCSSSCCBCCHHHHSTTSSCCCS
T ss_pred             cccCCCCCccCCCCC-CccceECCCCCcccCcccCCccCCcCCC
Confidence            346799999  9998 99999999 9999999999999999973

>1wys_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}

Probab=99.25  E-value=1.2e-12  Score=91.78  Aligned_cols=42  Identities=21%  Similarity=0.694  Sum_probs=39.0

Q ss_pred             ccccccc--ccccccccceeee-cCceecCCCCCCCCCCCcccchh
Q 038787           89 LEKRCEI--CDKKVGSIELKCR-CGHLYCGTHRYPKEHACTFDFKK  131 (153)
Q Consensus        89 ~~~rC~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk~  131 (153)
                      ..+||..  |+++ ++++|+|+ |+.+||..|||+++|+|+++++.
T Consensus        13 ~g~~Cs~~~C~~~-dflpf~C~~C~~~FC~~HR~~e~H~C~~~~~~   57 (75)
T 1wys_A           13 IGQHCQVQHCRQR-DFLPFVCDGCSGIFCLEHRSKDSHGCSEVNVV   57 (75)
T ss_dssp             CCCCCSCTTTCCC-SCCCEECTTTCCEECSTTCSSGGGTCCCCSSC
T ss_pred             cCCCcCcccCCCc-cceeeECcccCcCcCcccCCccccCCCCCccc
Confidence            4689998  9988 89999999 99999999999999999999863

>2eqe_A Tumor necrosis factor, alpha-induced protein 3; ZF-A20 domain, putative DNA-binding protein A20, zinc finger protein A20, structural genomics; NMR {Homo sapiens}

Probab=97.87  E-value=7.2e-06  Score=52.57  Aligned_cols=28  Identities=32%  Similarity=0.974  Sum_probs=25.5

Q ss_pred             cccc-cCCCCCCccccCCcchhhhhHHHH
Q 038787            4 PLCA-KGCGFYGTKEHKSMCSKCYNDFLE   31 (153)
Q Consensus         4 ~lC~-n~CGFfGs~at~~~CSkCy~~~~~   31 (153)
                      ..|. .||-|||+|.+.++|+.||.++..
T Consensus        16 ~kCRk~GC~fFGTpen~GFCTlCf~eyre   44 (48)
T 2eqe_A           16 SKCRKAGCVYFGTPENKGFCTLCFIEYSG   44 (48)
T ss_dssp             SBCSSTTCCSBCCTTTTTCCHHHHHHHHS
T ss_pred             chhhhcCCCcccCcccCceeeeehhhhhc
Confidence            4796 999999999999999999999864

>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1

Probab=92.85  E-value=0.05  Score=36.48  Aligned_cols=28  Identities=39%  Similarity=1.057  Sum_probs=24.4

Q ss_pred             ccccccccccccc--ceeee-cCceecCCCC
Q 038787           91 KRCEICDKKVGSI--ELKCR-CGHLYCGTHR  118 (153)
Q Consensus        91 ~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~HR  118 (153)
                      ..|..|+++.+++  --.|| ||.+||+.+-
T Consensus        12 ~~C~~C~~~F~~~~RrHHCR~CG~v~C~~Cs   42 (73)
T 1vfy_A           12 DACMICSKKFSLLNRKHHCRSCGGVFCQEHS   42 (73)
T ss_dssp             SBCTTTCCBCBTTBCCEECTTTCCEECGGGS
T ss_pred             CcccCCCCccCCccccccCCCCCEEEccccc
Confidence            5899999999985  58999 9999998763

>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A

Probab=91.96  E-value=0.065  Score=36.68  Aligned_cols=28  Identities=36%  Similarity=1.039  Sum_probs=24.2

Q ss_pred             cccccccccccccc--ceeee-cCceecCCC
Q 038787           90 EKRCEICDKKVGSI--ELKCR-CGHLYCGTH  117 (153)
Q Consensus        90 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  117 (153)
                      ...|..|+++.+++  --.|| ||.+||+.+
T Consensus        19 ~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~C   49 (82)
T 2yw8_A           19 ATHCRQCEKEFSISRRKHHCRNCGHIFCNTC   49 (82)
T ss_dssp             CCBCTTTCCBCBTTBCCEECTTTCCEECSGG
T ss_pred             CCcccCcCCcccCccccccCCCCCCEEChHH
Confidence            45899999999985  48999 999999864

>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A

Probab=91.55  E-value=0.068  Score=39.48  Aligned_cols=28  Identities=29%  Similarity=0.884  Sum_probs=24.2

Q ss_pred             cccccccccccccc--ceeee-cCceecCCC
Q 038787           90 EKRCEICDKKVGSI--ELKCR-CGHLYCGTH  117 (153)
Q Consensus        90 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  117 (153)
                      ...|..|+++.+++  --.|| ||.+||+.+
T Consensus        69 ~~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~C   99 (125)
T 1joc_A           69 VQNCMACGKGFSVTVRRHHCRQCGNIFCAEC   99 (125)
T ss_dssp             CCBCTTTCCBCCSSSCCEECTTTCCEECGGG
T ss_pred             CCCCcCcCCccccccccccCCCCCeEEChHH
Confidence            46899999999985  48999 999999864

>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1

Probab=91.53  E-value=0.1  Score=36.38  Aligned_cols=28  Identities=36%  Similarity=0.858  Sum_probs=24.5

Q ss_pred             cccccccccccccc--ceeee-cCceecCCC
Q 038787           90 EKRCEICDKKVGSI--ELKCR-CGHLYCGTH  117 (153)
Q Consensus        90 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  117 (153)
                      ...|..|.++.+++  --.|| ||.+||+.+
T Consensus         9 ~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~C   39 (88)
T 1wfk_A            9 ESRCYGCAVKFTLFKKEYGCKNCGRAFCNGC   39 (88)
T ss_dssp             CSBCTTTCCBCCSSSCEEECSSSCCEEETTT
T ss_pred             CCCCcCcCCcccCccccccCCCCCCEEChhH
Confidence            46899999999985  48999 999999975

>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*

Probab=91.32  E-value=0.16  Score=40.52  Aligned_cols=28  Identities=32%  Similarity=1.076  Sum_probs=24.5

Q ss_pred             cccccccccccccc--ceeee-cCceecCCC
Q 038787           90 EKRCEICDKKVGSI--ELKCR-CGHLYCGTH  117 (153)
Q Consensus        90 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  117 (153)
                      ...|..|+++.+++  -..|| ||.+||+.+
T Consensus       164 ~~~C~~C~~~F~~~~RrhHCR~CG~v~C~~C  194 (226)
T 3zyq_A          164 AEECHRCRVQFGVMTRKHHCRACGQIFCGKC  194 (226)
T ss_dssp             CSBCTTTCCBCBTTBCCEECTTTCCEECTTT
T ss_pred             CCCCcCcCCCCCccccccccCCCcCEeChhh
Confidence            46899999999985  58999 999999864

>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=91.16  E-value=0.11  Score=35.56  Aligned_cols=28  Identities=21%  Similarity=0.697  Sum_probs=24.4

Q ss_pred             cccccccccccccc--ceeee-cCceecCCC
Q 038787           90 EKRCEICDKKVGSI--ELKCR-CGHLYCGTH  117 (153)
Q Consensus        90 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  117 (153)
                      ...|..|.++.+++  --.|| ||.+||+..
T Consensus        14 ~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~C   44 (84)
T 1x4u_A           14 FGNCTGCSATFSVLKKRRSCSNCGNSFCSRC   44 (84)
T ss_dssp             CSSCSSSCCCCCSSSCCEECSSSCCEECTTT
T ss_pred             CCcCcCcCCccccchhhhhhcCCCcEEChhh
Confidence            46899999999985  48999 999999875

>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}

Probab=90.78  E-value=0.11  Score=35.67  Aligned_cols=28  Identities=29%  Similarity=0.756  Sum_probs=24.4

Q ss_pred             cccccccccccccc--ceeee-cCceecCCC
Q 038787           90 EKRCEICDKKVGSI--ELKCR-CGHLYCGTH  117 (153)
Q Consensus        90 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  117 (153)
                      ...|..|+++.+++  --.|| ||.+||+.+
T Consensus        21 ~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~C   51 (84)
T 1z2q_A           21 APACNGCGCVFTTTVRRHHCRNCGYVLCGDC   51 (84)
T ss_dssp             CCBCTTTCCBCCTTSCCEECTTTCCEECTGG
T ss_pred             CCCCcCcCCccccchhcccccCCCcEEChHH
Confidence            56899999999985  48999 999999874

>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1

Probab=90.72  E-value=0.2  Score=39.51  Aligned_cols=28  Identities=29%  Similarity=0.890  Sum_probs=24.5

Q ss_pred             cccccccccccccc--ceeee-cCceecCCC
Q 038787           90 EKRCEICDKKVGSI--ELKCR-CGHLYCGTH  117 (153)
Q Consensus        90 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  117 (153)
                      ...|..|+++.+++  --+|| ||.+||+.+
T Consensus       161 ~~~C~~C~~~F~~~~rrhhCr~CG~v~C~~C  191 (220)
T 1dvp_A          161 GRVCHRCRVEFTFTNRKHHCRNCGQVFCGQC  191 (220)
T ss_dssp             CSBCTTTCCBCCSSSCCEECTTTCCEECSTT
T ss_pred             CCccCCCCCccCCcccccccCCcCCEEChHH
Confidence            46999999999985  48999 999999964

>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}

Probab=90.12  E-value=0.13  Score=35.85  Aligned_cols=28  Identities=32%  Similarity=0.876  Sum_probs=24.2

Q ss_pred             cccccccccccccc--ceeee-cCceecCCC
Q 038787           90 EKRCEICDKKVGSI--ELKCR-CGHLYCGTH  117 (153)
Q Consensus        90 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  117 (153)
                      ...|..|.++.+++  -..|| ||.+||+..
T Consensus        20 ~~~C~~C~~~F~~~~RrhhCr~CG~v~C~~C   50 (90)
T 3t7l_A           20 APNCMNCQVKFTFTKRRHHCRACGKVFCGVC   50 (90)
T ss_dssp             CCBCTTTCCBCCSSSCCEECTTTCCEECGGG
T ss_pred             CCcCcCCCCcccchhhCccccCCCCEECCcc
Confidence            46899999999985  58999 999999864

>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1

Probab=87.85  E-value=0.2  Score=37.13  Aligned_cols=41  Identities=20%  Similarity=0.470  Sum_probs=28.2

Q ss_pred             cccccccccccccc--ceeee-cCceecCCC---CCCCCCCCcccch
Q 038787           90 EKRCEICDKKVGSI--ELKCR-CGHLYCGTH---RYPKEHACTFDFK  130 (153)
Q Consensus        90 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H---Ry~e~H~C~fDyk  130 (153)
                      ...|..|+++.+++  --.|| ||.+||+..   +.+..--|..=|.
T Consensus        19 ~~~C~~C~~~Fs~~~RkHHCR~CG~ifC~~Cs~~~~~~vRVC~~C~~   65 (120)
T 1y02_A           19 EPSCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGNGPRLCLLCQR   65 (120)
T ss_dssp             -CCCTTTCCCCSSGGGCEECTTTCCEECGGGEEC----CCEEHHHHH
T ss_pred             cCcccCcCCccccccccccCCCCCCeeCHHHhCCCCCCceECHHHHH
Confidence            46899999999885  58999 999998754   5555555665443

>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}

Probab=86.67  E-value=0.22  Score=32.57  Aligned_cols=24  Identities=33%  Similarity=0.816  Sum_probs=20.0

Q ss_pred             cccccccccccccc--cceeee-cCce
Q 038787           89 LEKRCEICDKKVGS--IELKCR-CGHL  112 (153)
Q Consensus        89 ~~~rC~~C~kkvgl--~gf~Cr-Cg~~  112 (153)
                      ++..|..|++++++  +|++|+ |+.+
T Consensus        18 ~~~~C~~Cg~~i~~gkq~~kC~dC~~~   44 (61)
T 4b6d_A           18 KPESCVPCGKRIKFGKLSLKCRDCRVV   44 (61)
T ss_dssp             SCEECTTTCCEECTTCEEEEESSSSCE
T ss_pred             CCcccccccCEEEEeeEeeECCCCCCe
Confidence            46799999999987  799999 8643

>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A

Probab=84.41  E-value=0.41  Score=40.19  Aligned_cols=41  Identities=15%  Similarity=0.276  Sum_probs=27.7

Q ss_pred             cccccccccccc-cc--cceeee-cCceecCCCCCCCCCCCcccch
Q 038787           89 LEKRCEICDKKV-GS--IELKCR-CGHLYCGTHRYPKEHACTFDFK  130 (153)
Q Consensus        89 ~~~rC~~C~kkv-gl--~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk  130 (153)
                      .+..|..|++.+ |+  .|++|| ||.++|..-.-.=. .|.-+.-
T Consensus       356 ~~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~~~~-~C~~~~~  400 (406)
T 2vrw_B          356 ETTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLGRVP-PCGRHGQ  400 (406)
T ss_dssp             SCCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGGGSC-CC-----
T ss_pred             CCCCCccccchhceeCCCCCCCCCCcCccchhhhhhCC-CCCCCch
Confidence            568999999988 66  799999 99999976432112 3876654

>2eqf_A Tumor necrosis factor, alpha-induced protein 3; ZF-A20 domain, putative DNA-binding protein A20, zinc finger protein A20, structural genomics; NMR {Homo sapiens}

Probab=80.07  E-value=0.86  Score=28.59  Aligned_cols=24  Identities=21%  Similarity=0.658  Sum_probs=21.4

Q ss_pred             cccCCCCCCccccCCcchhhhhHH
Q 038787            6 CAKGCGFYGTKEHKSMCSKCYNDF   29 (153)
Q Consensus         6 C~n~CGFfGs~at~~~CSkCy~~~   29 (153)
                      ++-+|.-|||.-.+++|.-||.-.
T Consensus        13 ~apgCdhygN~kc~GyCNeC~~fK   36 (46)
T 2eqf_A           13 RAPACDHFGNAKCNGYCNECFQFK   36 (46)
T ss_dssp             SSTTCCSCCBGGGTBSCHHHHHHH
T ss_pred             cCcccccccchhhhhhhHHHHhhH
Confidence            478999999999999999999644

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	153
d1wffa_	85	g.80.1.1 (A:) ANUBL1 (AN1, ubiquitin-like, homolog	1e-17
d1wfla_	74	g.80.1.1 (A:) Zinc finger A20 domain containing pr	1e-15
d1wfha_	64	g.80.1.1 (A:) Zinc finger A20 and AN1 domains cont	2e-15
d1wfpa_	74	g.80.1.1 (A:) Zinc finger A20 and AN1 domains cont	2e-14
d2c7na1	56	g.39.1.15 (A:18-73) RabGEF1 (Rabex-5), ubiquitin-b	8e-08

>d1wffa_ g.80.1.1 (A:) ANUBL1 (AN1, ubiquitin-like, homolog) {Mouse (Mus musculus) [TaxId: 10090]} Length = 85

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: ANUBL1 (AN1, ubiquitin-like, homolog)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 70.7 bits (173), Expect = 1e-17
 Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 1/81 (1%)

Query: 67  SSERTTIDSAAVECSSGKTTSALEKRCEICDKKVGSIE-LKCRCGHLYCGTHRYPKEHAC 125
           SS  + I       +  +T   + K C +C KK G     +CRCG+ +C +HRY + H C
Sbjct: 2   SSGSSGIHHLPPVKAPLQTKKKIMKHCFLCGKKTGLATSFECRCGNNFCASHRYAEAHGC 61

Query: 126 TFDFKKFDRETLVEDDPLIRA 146
            +D+K   R  L E +P+   
Sbjct: 62  NYDYKSAGRRYLEEANPVSGP 82

>d1wfla_ g.80.1.1 (A:) Zinc finger A20 domain containing protein 2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 74

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 domain containing protein 2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 65.3 bits (159), Expect = 1e-15
 Identities = 25/65 (38%), Positives = 36/65 (55%)

Query: 67  SSERTTIDSAAVECSSGKTTSALEKRCEICDKKVGSIELKCRCGHLYCGTHRYPKEHACT 126
           SS  +   S+  E  + +     + RC +C KKVG     CRCG+L+CG HRY  +H C 
Sbjct: 2   SSGSSGPSSSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCP 61

Query: 127 FDFKK 131
           +D+K 
Sbjct: 62  YDYKA 66

>d1wfha_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At2g36320 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 64

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 and AN1 domains containing protein At2g36320
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 64.1 bits (156), Expect = 2e-15
 Identities = 23/44 (52%), Positives = 28/44 (63%)

Query: 91  KRCEICDKKVGSIELKCRCGHLYCGTHRYPKEHACTFDFKKFDR 134
            RC +C K+VG     CRCG  +CG+HRYP+ H CTFDFK    
Sbjct: 16  NRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGS 59

>d1wfpa_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At1g12440 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 74

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 and AN1 domains containing protein At1g12440
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 62.2 bits (151), Expect = 2e-14
 Identities = 34/71 (47%), Positives = 39/71 (54%), Gaps = 3/71 (4%)

Query: 64  SCSSSERTTIDSAAVECSSGKTTSALEKRCEICDKKVGSIELKCRCGHLYCGTHRYPKEH 123
           S  SS     DSAA      K+T+    RC  C+KKVG    KCRCG  +CGTHRYP+ H
Sbjct: 2   SSGSSGTRGGDSAAAPLDPPKSTA---TRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESH 58

Query: 124 ACTFDFKKFDR 134
            C FDFK    
Sbjct: 59  ECQFDFKGVAS 69

>d2c7na1 g.39.1.15 (A:18-73) RabGEF1 (Rabex-5), ubiquitin-binding domain {Human (Homo sapiens) [TaxId: 9606]} Length = 56

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: A20-like zinc finger
domain: RabGEF1 (Rabex-5), ubiquitin-binding domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.5 bits (105), Expect = 8e-08
 Identities = 12/29 (41%), Positives = 17/29 (58%)

Query: 5  LCAKGCGFYGTKEHKSMCSKCYNDFLEEQ 33
          LC KGCG+YG    +  CSKC+ +   + 
Sbjct: 1  LCKKGCGYYGNPAWQGFCSKCWREEYHKA 29

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	153
d1wffa_	85	ANUBL1 (AN1, ubiquitin-like, homolog) {Mouse (Mus	99.94
d1wfha_	64	Zinc finger A20 and AN1 domains containing protein	99.92
d1wfla_	74	Zinc finger A20 domain containing protein 2 {Mouse	99.92
d1wfpa_	74	Zinc finger A20 and AN1 domains containing protein	99.91
d2c7na1	56	RabGEF1 (Rabex-5), ubiquitin-binding domain {Human	99.67
d1wfea_	86	AN1-type zinc finger protein 1 {Mouse (Mus musculu	98.28
d1wfka_	88	Zinc finger FYVE domain containing protein 19 {Mou	94.77
d1dvpa2	72	Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7	93.82
d1vfya_	67	vps27p protein {Baker's yeast (Saccharomyces cerev	93.26
d1joca1	64	Eea1 {Human (Homo sapiens) [TaxId: 9606]}	91.89
d1zbdb_	124	Effector domain of rabphilin-3a {Rat (Rattus norve	91.12
d1y02a2	51	Rififylin (FYVE-RING finger protein Sakura) {Human	89.86
d1tbna_	66	Protein kinase c-gamma {Rat (Rattus rattus) [TaxId	83.85
d1r79a_	84	Diacylglycerol kinase delta {Human (Homo sapiens)	81.45

>d1wffa_ g.80.1.1 (A:) ANUBL1 (AN1, ubiquitin-like, homolog) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: ANUBL1 (AN1, ubiquitin-like, homolog)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.94  E-value=3.1e-29  Score=178.20  Aligned_cols=62  Identities=35%  Similarity=0.881  Sum_probs=57.7

Q ss_pred             ccccccccccccccccc-cceeeecCceecCCCCCCCCCCCcccchhhhHHHHHHhCCceecc
Q 038787           86 TSALEKRCEICDKKVGS-IELKCRCGHLYCGTHRYPKEHACTFDFKKFDRETLVEDDPLIRAD  147 (153)
Q Consensus        86 ~~~~~~rC~~C~kkvgl-~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~l~k~Np~v~~~  147 (153)
                      .+..++||+.|+|||+| ++|+||||++||+.|||||.|+|+||||+.||++|+++||+|.+.
T Consensus        21 kk~~~~RC~~C~KKl~l~~~~~CrCg~~FC~~HR~pe~H~CtfDyK~~~k~~L~k~NP~i~p~   83 (85)
T d1wffa_          21 KKKIMKHCFLCGKKTGLATSFECRCGNNFCASHRYAEAHGCNYDYKSAGRRYLEEANPVSGPS   83 (85)
T ss_dssp             CCCCCCBCSSSCCBCSSSSCEECTTCCEECTTTCSTGGGTCCSCCSSSCCCCCCCCCCCCCTT
T ss_pred             ccccCCcChhcCCeecCCcCeecCCCCEehhhcCCCcCcCCCcchHHHHHHHHHHHCCccCCC
Confidence            34457899999999999 589999999999999999999999999999999999999999874

>d1wfha_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At2g36320 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 and AN1 domains containing protein At2g36320
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.92  E-value=1.7e-26  Score=156.30  Aligned_cols=52  Identities=44%  Similarity=1.037  Sum_probs=48.0

Q ss_pred             ccccccccccccccccccceeeecCceecCCCCCCCCCCCcccchhhhHHHH
Q 038787           86 TSALEKRCEICDKKVGSIELKCRCGHLYCGTHRYPKEHACTFDFKKFDRETL  137 (153)
Q Consensus        86 ~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~l  137 (153)
                      ++++++||..|+|||+|++|+||||++||+.|||||.|+|+||||++||..|
T Consensus        11 ~~~k~~RC~~C~KKl~l~~~~CrCg~~FC~~HR~pe~H~CtfDyK~~Gr~~~   62 (64)
T d1wfha_          11 PPQRPNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGSGPS   62 (64)
T ss_dssp             CCSSCCCCTTTCCCCCTTCEECSSSCEECTTTCSTTTTTCCCCCSCCCCSCC
T ss_pred             CCCCCCcChhhCCCccceeeeccCCCEehhhcCCCcCcCCCCcchhccCCCC
Confidence            3457899999999999999999999999999999999999999999998643

>d1wfla_ g.80.1.1 (A:) Zinc finger A20 domain containing protein 2 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 domain containing protein 2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.92  E-value=8.6e-26  Score=156.67  Aligned_cols=48  Identities=44%  Similarity=1.070  Sum_probs=45.0

Q ss_pred             cccccccccccccccccceeeecCceecCCCCCCCCCCCcccchhhhH
Q 038787           87 SALEKRCEICDKKVGSIELKCRCGHLYCGTHRYPKEHACTFDFKKFDR  134 (153)
Q Consensus        87 ~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r  134 (153)
                      +.+++||..|+|||||++|.||||++||++|||||.|+|+||||++|.
T Consensus        22 k~k~~RC~~C~KKl~l~~~~CrCg~~FC~~HR~pe~H~CtfDyK~~g~   69 (74)
T d1wfla_          22 KPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAS   69 (74)
T ss_dssp             CSCTTBCSSSCCBCGGGCEECTTSCEECSSSCSTTTTTCCCCGGGTSS
T ss_pred             CCCCCcChhhCCcccceeeEccCCCEehhhcCCCcCcCCCCccccccc
Confidence            446899999999999999999999999999999999999999998874

>d1wfpa_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At1g12440 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 and AN1 domains containing protein At1g12440
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.91  E-value=1.9e-25  Score=154.90  Aligned_cols=51  Identities=49%  Similarity=1.104  Sum_probs=47.6

Q ss_pred             CCccccccccccccccccccceeeecCceecCCCCCCCCCCCcccchhhhH
Q 038787           84 KTTSALEKRCEICDKKVGSIELKCRCGHLYCGTHRYPKEHACTFDFKKFDR  134 (153)
Q Consensus        84 ~~~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r  134 (153)
                      .+++..++||..|+|||+|++|.||||++||+.|||||.|+|+||||+.||
T Consensus        19 ~~~k~kk~RC~~C~KKl~l~~~~CrCg~~FC~~HR~pe~H~C~fDyK~~gr   69 (74)
T d1wfpa_          19 DPPKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVAS   69 (74)
T ss_dssp             CCTTCCCCBCSSSCCBCTTTCEECTTSCEECTTTCSTTTSCCCSCTTSCCC
T ss_pred             CCCCCCCCcChhcCCccCCCceecCCCChhhhccCCccCcCCCCcchhccc
Confidence            345567899999999999999999999999999999999999999999987

>d2c7na1 g.39.1.15 (A:18-73) RabGEF1 (Rabex-5), ubiquitin-binding domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: A20-like zinc finger
domain: RabGEF1 (Rabex-5), ubiquitin-binding domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=7.4e-18  Score=110.68  Aligned_cols=32  Identities=38%  Similarity=1.005  Sum_probs=29.8

Q ss_pred             ccccCCCCCCccccCCcchhhhhHHHHhhhcc
Q 038787            5 LCAKGCGFYGTKEHKSMCSKCYNDFLEEQVTD   36 (153)
Q Consensus         5 lC~n~CGFfGs~at~~~CSkCy~~~~~~~~~~   36 (153)
                      ||+|||||||||+|+|||||||||+..++++.
T Consensus         1 lC~~gCGFyG~~~~~g~CSkCyr~~~~k~~q~   32 (56)
T d2c7na1           1 LCKKGCGYYGNPAWQGFCSKCWREEYHKARQK   32 (56)
T ss_dssp             CCTTCSSSCCCGGGTTCCHHHHHHHHHHHHHH
T ss_pred             CCccCCCCCCCcccCCcchHHHHHHHHHHHHH
Confidence            79999999999999999999999999877665

>d1wfea_ g.80.1.1 (A:) AN1-type zinc finger protein 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: AN1-type zinc finger protein 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.28  E-value=1.2e-07  Score=65.99  Aligned_cols=39  Identities=26%  Similarity=0.674  Sum_probs=34.2

Q ss_pred             cccccccc--ccccccccceeee-cCceecCCCCCCCCCCCcc
Q 038787           88 ALEKRCEI--CDKKVGSIELKCR-CGHLYCGTHRYPKEHACTF  127 (153)
Q Consensus        88 ~~~~rC~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~f  127 (153)
                      .+..+|..  |+ ++.++.|.|. |+..||..||+++.|.|.-
T Consensus        23 ~~~~~Cs~~~C~-~~~~lp~~C~~C~~~FC~~Hr~~e~H~C~~   64 (86)
T d1wfea_          23 HKSYSCSFKGCT-DVELVAVICPYCEKNFCLRHRHQSDHDCEK   64 (86)
T ss_dssp             SCCEECCSTTCC-CEESSCEECTTTCCEECGGGCSTGGGTCSS
T ss_pred             CccCcCCCCCCC-CcccCcccchhhCcchhhccCCccCCCCCC
Confidence            35678997  97 4689999997 9999999999999999974

>d1wfka_ g.50.1.1 (A:) Zinc finger FYVE domain containing protein 19 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: Zinc finger FYVE domain containing protein 19
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.77  E-value=0.0065  Score=41.08  Aligned_cols=30  Identities=33%  Similarity=0.808  Sum_probs=26.0

Q ss_pred             ccccccccccccccc--ceeee-cCceecCCCC
Q 038787           89 LEKRCEICDKKVGSI--ELKCR-CGHLYCGTHR  118 (153)
Q Consensus        89 ~~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~HR  118 (153)
                      ..++|..|++..+++  -..|| ||.+||..+-
T Consensus         8 ~~s~C~~C~~~Fs~~~rrhhCr~CG~vfC~~Cs   40 (88)
T d1wfka_           8 MESRCYGCAVKFTLFKKEYGCKNCGRAFCNGCL   40 (88)
T ss_dssp             CCSBCTTTCCBCCSSSCEEECSSSCCEEETTTS
T ss_pred             ccCcCcccCchhccccccccccccChhhChHHh
Confidence            367999999999985  68999 9999998764

>d1dvpa2 g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: Hrs
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=93.82  E-value=0.022  Score=36.91  Aligned_cols=28  Identities=29%  Similarity=0.897  Sum_probs=24.8

Q ss_pred             ccccccccccccc--ceeee-cCceecCCCC
Q 038787           91 KRCEICDKKVGSI--ELKCR-CGHLYCGTHR  118 (153)
Q Consensus        91 ~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~HR  118 (153)
                      +.|..|+++.+++  --.|| ||.+||+.+-
T Consensus        14 ~~C~~C~~~F~~~~rrhhCr~CG~~~C~~C~   44 (72)
T d1dvpa2          14 RVCHRCRVEFTFTNRKHHCRNCGQVFCGQCT   44 (72)
T ss_dssp             SBCTTTCCBCCSSSCCEECTTTCCEECSTTS
T ss_pred             CccccCCCcccCccccccccccCCeeChhhh
Confidence            5799999999995  58999 9999998874

>d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: vps27p protein
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.26  E-value=0.018  Score=36.78  Aligned_cols=27  Identities=41%  Similarity=1.099  Sum_probs=23.6

Q ss_pred             ccccccccccccc--ceeee-cCceecCCC
Q 038787           91 KRCEICDKKVGSI--ELKCR-CGHLYCGTH  117 (153)
Q Consensus        91 ~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  117 (153)
                      +.|..|+++.+|+  --.|| ||.+||+.+
T Consensus         6 ~~C~~C~~~F~~~~rkhhCr~CG~~fC~~C   35 (67)
T d1vfya_           6 DACMICSKKFSLLNRKHHCRSCGGVFCQEH   35 (67)
T ss_dssp             SBCTTTCCBCBTTBCCEECTTTCCEECGGG
T ss_pred             cccccCCCcccCcccccccccCCCEecccc
Confidence            3599999999994  48999 999999876

>d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: Eea1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.89  E-value=0.039  Score=34.75  Aligned_cols=29  Identities=28%  Similarity=0.851  Sum_probs=24.7

Q ss_pred             cccccccccccccc--ceeee-cCceecCCCC
Q 038787           90 EKRCEICDKKVGSI--ELKCR-CGHLYCGTHR  118 (153)
Q Consensus        90 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~HR  118 (153)
                      .+.|..|+++.+++  --.|| ||.+||+..-
T Consensus         8 ~~~C~~C~~~F~~~~rrHHCR~CG~v~C~~Cs   39 (64)
T d1joca1           8 VQNCMACGKGFSVTVRRHHCRQCGNIFCAECS   39 (64)
T ss_dssp             CCBCTTTCCBCCSSSCCEECTTTCCEECGGGS
T ss_pred             CCcCcCcCCcccCCccccchhhhCCeeccccc
Confidence            45799999999995  58899 9999998753

>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: Effector domain of rabphilin-3a
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.12  E-value=0.049  Score=38.13  Aligned_cols=30  Identities=23%  Similarity=0.651  Sum_probs=25.0

Q ss_pred             cccccccccccccc---cceeee-cCceecCCCC
Q 038787           89 LEKRCEICDKKVGS---IELKCR-CGHLYCGTHR  118 (153)
Q Consensus        89 ~~~rC~~C~kkvgl---~gf~Cr-Cg~~FC~~HR  118 (153)
                      ..+.|..|++.+++   .+..|| ||.+||+.=+
T Consensus        47 ~~~~C~~C~~~f~~~~~~~~~C~~C~~~~C~~C~   80 (124)
T d1zbdb_          47 GVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCG   80 (124)
T ss_dssp             SSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSE
T ss_pred             CCCcCcccCCcccCCCCCCCcCccCCcccccCCC
Confidence            35789999999986   357899 9999998853

>d1y02a2 g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger protein Sakura) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: Rififylin (FYVE-RING finger protein Sakura)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.86  E-value=0.058  Score=32.85  Aligned_cols=26  Identities=23%  Similarity=0.701  Sum_probs=22.6

Q ss_pred             cccccccccccc--ceeee-cCceecCCC
Q 038787           92 RCEICDKKVGSI--ELKCR-CGHLYCGTH  117 (153)
Q Consensus        92 rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  117 (153)
                      -|..|+++.+++  -..|| ||.+||+..
T Consensus         2 ~C~~C~~~F~~~~rkhhCr~CG~~fC~~C   30 (51)
T d1y02a2           2 SCKSCGAHFANTARKQTCLDCKKNFCMTC   30 (51)
T ss_dssp             CCTTTCCCCSSGGGCEECTTTCCEECGGG
T ss_pred             CccccCCcccCCccCcccccCCcccCccc
Confidence            488999999994  58999 999999876

>d1tbna_ g.49.1.1 (A:) Protein kinase c-gamma {Rat (Rattus rattus) [TaxId: 10117]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Protein kinase c-gamma
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=83.85  E-value=0.44  Score=29.47  Aligned_cols=42  Identities=17%  Similarity=0.286  Sum_probs=30.0

Q ss_pred             ccccccccccccc-c--cceeee-cCceecCCCCCCCCCCCcccch
Q 038787           89 LEKRCEICDKKVG-S--IELKCR-CGHLYCGTHRYPKEHACTFDFK  130 (153)
Q Consensus        89 ~~~rC~~C~kkvg-l--~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk  130 (153)
                      .+..|..|++.|- +  .||+|+ |+.++=....-.=...|..++.
T Consensus        18 ~~~~C~~C~~~i~g~~~~g~~C~~C~~~~H~~C~~~v~~~C~~~~~   63 (66)
T d1tbna_          18 SPTFCDHCGSLLYGLVHQGMKCSCCEMNVHRRCVRSVPSLCGVDHT   63 (66)
T ss_dssp             SCCBCSSSCCBCCTTSSSCEEETTTCCEECTTTTTTSCCCSSCCCC
T ss_pred             CCcCCcCCCCcccCcccCccccCcccCeEChHHhccccccCCCCcc
Confidence            4578999999884 4  589999 9887765554444456766654

>d1r79a_ g.49.1.1 (A:) Diacylglycerol kinase delta {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Diacylglycerol kinase delta
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.45  E-value=0.34  Score=31.68  Aligned_cols=24  Identities=29%  Similarity=0.934  Sum_probs=19.6

Q ss_pred             ccccccccccccc----ccceeee-cCce
Q 038787           89 LEKRCEICDKKVG----SIELKCR-CGHL  112 (153)
Q Consensus        89 ~~~rC~~C~kkvg----l~gf~Cr-Cg~~  112 (153)
                      .+.+|..|++.++    ++||+|+ |+.+
T Consensus        37 ~~~~C~~C~~~i~~~~~~qg~~C~~C~~~   65 (84)
T d1r79a_          37 VSAKCTVCDKTCGSVLRLQDWRCLWCKAM   65 (84)
T ss_dssp             TTCBCSSSCCBCCCTTTCCCEEESSSCCE
T ss_pred             CCCCCcccCcccCCccccCcEecCcCCch
Confidence            3679999999983    5799999 8764