Citrus Sinensis ID: 038789

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120--
MAELLQNPEALSKATSRDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDLPYGHGRKIRPSHTGGSTTSYCAFCHLVPYHNFVSSPEE
ccEEcccccEEEEEEccccccccccccccccccccccccccccccEEEcccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEcccccEEEEEEEcccccccc
cccHcEEEEEEEEEEcccccccccHHHcccHHHcccccccccccEEEEcccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEEccccEEEEEcccccccccc
maellqnpealskatsrdestwdhahsfmpkrflgsevdfigrnfksipfgagrricpdlplditmlyplrgslsnsfdwkldlpyghgrkirpshtggsttsycafchlvpyhnfvsspee
maellqnpealskatsrdestwdhaHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDLPYGHGRKIRPSHTGGSTTSYCAFCHLVPYHNFVSSPEE
MAELLQNPEALSKATSRDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDLPYGHGRKIRPSHTGGSTTSYCAFCHLVPYHNFVSSPEE
************************AHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDLPYGHGRKIRPSHTGGSTTSYCAFCHLVPYHNFV*****
MAELLQNPEALSKATSRDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDLPYGHGRKIRPSHTGGSTTSYCAFCHLVPYH*FV*****
***********************HAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDLPYGHGRKIRPSHTGGSTTSYCAFCHLVPYHNFVSSPEE
**ELLQNPEALSKATSRDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDLPYGHGRKIRPSHTGGSTTSYCAFCHLVPYHNFV*****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAELLQNPEALSKATSRDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDLPYGHGRKIRPSHTGGSTTSYCAFCHLVPYHNFVSSPEE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query122 2.2.26 [Sep-21-2011]
D1MI46495 Geraniol 8-hydroxylase OS N/A no 0.573 0.141 0.571 3e-18
Q8VWZ7493 Geraniol 8-hydroxylase OS N/A no 0.573 0.141 0.571 6e-18
O23976490 7-ethoxycoumarin O-deethy N/A no 0.598 0.148 0.52 5e-17
O64637512 Cytochrome P450 76C2 OS=A yes no 0.795 0.189 0.43 1e-15
O64636512 Cytochrome P450 76C1 OS=A no no 0.565 0.134 0.507 1e-14
P37121467 Cytochrome P450 76A1 (Fra N/A no 0.565 0.147 0.507 2e-14
O64635511 Cytochrome P450 76C4 OS=A no no 0.565 0.135 0.478 3e-14
Q9FXW4488 Probable (S)-N-methylcocl N/A no 0.565 0.141 0.478 8e-14
P93531500 Cytochrome P450 71D7 OS=S N/A no 0.565 0.138 0.478 1e-13
O64638515 Cytochrome P450 76C3 OS=A no no 0.565 0.133 0.463 2e-13
>sp|D1MI46|C76BA_SWEMU Geraniol 8-hydroxylase OS=Swertia mussotii GN=CYP76B10 PE=1 SV=1 Back     alignment and function desciption
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 40/70 (57%), Positives = 52/70 (74%)

Query: 14  ATSRDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGS 73
           A SRD++ W    SF P+RFL SE++  G++F+ IPFGAGRRICP LPL + M+  + GS
Sbjct: 395 AISRDDAIWKDPLSFKPERFLESELEMRGKDFELIPFGAGRRICPGLPLAVRMVPVMLGS 454

Query: 74  LSNSFDWKLD 83
           L NSFDWKL+
Sbjct: 455 LLNSFDWKLE 464
Hydroxylase involved in the biosynthesis of hydroxygeraniol, a precursor of the iridoid monoterpenoid swertiamarin.
Swertia mussotii (taxid: 137888)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 3EC: .EC: 1EC: 5EC: 2
>sp|Q8VWZ7|C76B6_CATRO Geraniol 8-hydroxylase OS=Catharanthus roseus GN=CYP76B6 PE=1 SV=1 Back     alignment and function description
>sp|O23976|C76B1_HELTU 7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus GN=CYP76B1 PE=1 SV=1 Back     alignment and function description
>sp|O64637|C76C2_ARATH Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1 Back     alignment and function description
>sp|O64636|C76C1_ARATH Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1 Back     alignment and function description
>sp|P37121|C76A1_SOLME Cytochrome P450 76A1 (Fragment) OS=Solanum melongena GN=CYP76A1 PE=2 SV=1 Back     alignment and function description
>sp|O64635|C76C4_ARATH Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=3 SV=1 Back     alignment and function description
>sp|Q9FXW4|C80B2_COPJA Probable (S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Coptis japonica GN=CYP80B2 PE=2 SV=1 Back     alignment and function description
>sp|P93531|C71D7_SOLCH Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1 Back     alignment and function description
>sp|O64638|C76C3_ARATH Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query122
297742641 373 unnamed protein product [Vitis vinifera] 0.680 0.222 0.475 4e-19
224058639 493 cytochrome P450 [Populus trichocarpa] gi 0.573 0.141 0.614 5e-18
359474049 399 PREDICTED: cytochrome P450 76C4-like [Vi 0.573 0.175 0.557 2e-17
357515917 492 Cytochrome P450 [Medicago truncatula] gi 0.549 0.136 0.597 5e-17
7406712 499 putative ripening-related P-450 enzyme [ 0.573 0.140 0.557 5e-17
388517473 509 unknown [Medicago truncatula] 0.549 0.131 0.582 6e-17
357515911 496 Cytochrome P450 [Medicago truncatula] gi 0.549 0.135 0.582 6e-17
300193870 494 geraniol 10-hydroxylase [Picrorhiza kurr 0.573 0.141 0.585 8e-17
225426693 499 PREDICTED: cytochrome P450 76C4 [Vitis v 0.573 0.140 0.557 8e-17
403399733 495 RecName: Full=Geraniol 8-hydroxylase; Al 0.573 0.141 0.571 1e-16
>gi|297742641|emb|CBI34790.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score = 99.0 bits (245), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 49/103 (47%), Positives = 65/103 (63%), Gaps = 20/103 (19%)

Query: 1   MAELLQNPEALSKA--------------------TSRDESTWDHAHSFMPKRFLGSEVDF 40
           MAELL NPE L KA                      RD +TW++ +SF+P+RFLG ++D 
Sbjct: 240 MAELLHNPETLLKARMELLQTIGQDKQVLVNAWAIGRDPNTWENPNSFVPERFLGLDMDV 299

Query: 41  IGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLD 83
            G+NF+ IPFGAGRRICP LPL I M++ +  SL +S+DWKL+
Sbjct: 300 KGQNFELIPFGAGRRICPGLPLAIRMVHLMLASLIHSYDWKLE 342

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224058639|ref|XP_002299579.1| cytochrome P450 [Populus trichocarpa] gi|222846837|gb|EEE84384.1| cytochrome P450 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359474049|ref|XP_002275279.2| PREDICTED: cytochrome P450 76C4-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|357515917|ref|XP_003628247.1| Cytochrome P450 [Medicago truncatula] gi|355522269|gb|AET02723.1| Cytochrome P450 [Medicago truncatula] Back     alignment and taxonomy information
>gi|7406712|emb|CAB85635.1| putative ripening-related P-450 enzyme [Vitis vinifera] Back     alignment and taxonomy information
>gi|388517473|gb|AFK46798.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|357515911|ref|XP_003628244.1| Cytochrome P450 [Medicago truncatula] gi|355522266|gb|AET02720.1| Cytochrome P450 [Medicago truncatula] Back     alignment and taxonomy information
>gi|300193870|gb|ADJ68324.1| geraniol 10-hydroxylase [Picrorhiza kurrooa] Back     alignment and taxonomy information
>gi|225426693|ref|XP_002281735.1| PREDICTED: cytochrome P450 76C4 [Vitis vinifera] Back     alignment and taxonomy information
>gi|403399733|sp|D1MI46.1|C76BA_SWEMU RecName: Full=Geraniol 8-hydroxylase; AltName: Full=Cytochrome P450 76B10; AltName: Full=Geraniol 10-hydroxylase; Short=SmG10H gi|269838629|gb|ACZ48680.1| geraniol 10-hydroxylase [Swertia mussotii] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query122
UNIPROTKB|Q8VWZ7493 CYP76B6 "Geraniol 8-hydroxylas 0.573 0.141 0.571 9.9e-19
UNIPROTKB|D1MI46495 CYP76B10 "Geraniol 8-hydroxyla 0.573 0.141 0.571 1.6e-18
TAIR|locus:2043605512 CYP76C2 ""cytochrome P450, fam 0.795 0.189 0.43 5.9e-18
TAIR|locus:2043699512 CYP76C1 ""cytochrome P450, fam 0.795 0.189 0.43 1.4e-16
TAIR|locus:2043694511 CYP76C4 ""cytochrome P450, fam 0.565 0.135 0.478 5.1e-16
TAIR|locus:2012673368 CYP76C5 ""cytochrome P450, fam 0.606 0.201 0.460 5.7e-16
TAIR|locus:2012693511 CYP76C6 ""cytochrome P450, fam 0.606 0.144 0.460 6e-15
TAIR|locus:2100982498 CYP76C7 ""cytochrome P450, fam 0.557 0.136 0.455 5e-14
TAIR|locus:2031820504 CYP71B7 ""cytochrome P450, fam 0.778 0.188 0.397 4.9e-13
TAIR|locus:2139084516 CYP706A4 ""cytochrome P450, fa 0.565 0.133 0.459 5.5e-13
UNIPROTKB|Q8VWZ7 CYP76B6 "Geraniol 8-hydroxylase" [Catharanthus roseus (taxid:4058)] Back     alignment and assigned GO terms
 Score = 213 (80.0 bits), Expect = 9.9e-19, Sum P(2) = 9.9e-19
 Identities = 40/70 (57%), Positives = 52/70 (74%)

Query:    14 ATSRDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGS 73
             A  RDE+ WD A +F P+RF+ SE+D  GR+F+ IPFGAGRRICP LPL +  +  + GS
Sbjct:   393 AIGRDETVWDDALAFKPERFMESELDIRGRDFELIPFGAGRRICPGLPLALRTVPLMLGS 452

Query:    74 LSNSFDWKLD 83
             L NSF+WKL+
Sbjct:   453 LLNSFNWKLE 462
GO:0016099 "monoterpenoid biosynthetic process" evidence=IDA
GO:0016709 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen" evidence=IDA
UNIPROTKB|D1MI46 CYP76B10 "Geraniol 8-hydroxylase" [Swertia mussotii (taxid:137888)] Back     alignment and assigned GO terms
TAIR|locus:2043605 CYP76C2 ""cytochrome P450, family 76, subfamily C, polypeptide 2"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2043699 CYP76C1 ""cytochrome P450, family 76, subfamily C, polypeptide 1"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2043694 CYP76C4 ""cytochrome P450, family 76, subfamily C, polypeptide 4"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2012673 CYP76C5 ""cytochrome P450, family 76, subfamily C, polypeptide 5"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2012693 CYP76C6 ""cytochrome P450, family 76, subfamily C, polypeptide 6"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2100982 CYP76C7 ""cytochrome P450, family 76, subfamily C, polypeptide 7"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031820 CYP71B7 ""cytochrome P450, family 71 subfamily B, polypeptide 7"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139084 CYP706A4 ""cytochrome P450, family 706, subfamily A, polypeptide 4"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
CYP76F3
cytochrome P450 (466 aa)
(Populus trichocarpa)
Predicted Functional Partners:
CYP715A2-2
cytochrome P450 (359 aa)
  •     0.450

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query122
PLN00110504 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F 1e-13
PLN03234499 PLN03234, PLN03234, cytochrome P450 83B1; Provisio 2e-13
PLN02966502 PLN02966, PLN02966, cytochrome P450 83A1 2e-13
PLN02687517 PLN02687, PLN02687, flavonoid 3'-monooxygenase 2e-13
PLN02183516 PLN02183, PLN02183, ferulate 5-hydroxylase 9e-13
PLN00168519 PLN00168, PLN00168, Cytochrome P450; Provisional 2e-11
pfam00067461 pfam00067, p450, Cytochrome P450 4e-10
PLN02394503 PLN02394, PLN02394, trans-cinnamate 4-monooxygenas 5e-10
PLN03112514 PLN03112, PLN03112, cytochrome P450 family protein 1e-08
PLN02655466 PLN02655, PLN02655, ent-kaurene oxidase 2e-05
COG2124411 COG2124, CypX, Cytochrome P450 [Secondary metaboli 3e-04
>gnl|CDD|177725 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information 
 Score = 65.6 bits (160), Expect = 1e-13
 Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 3/72 (4%)

Query: 14  ATSRDESTWDHAHSFMPKRFLG---SEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPL 70
           A  RD   W++   F P+RFL    +++D  G +F+ IPFGAGRRIC    + I ++  +
Sbjct: 396 AIGRDPDVWENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYI 455

Query: 71  RGSLSNSFDWKL 82
            G+L +SFDWKL
Sbjct: 456 LGTLVHSFDWKL 467

Length = 504
>gnl|CDD|178773 PLN03234, PLN03234, cytochrome P450 83B1; Provisional Back     alignment and domain information
>gnl|CDD|178550 PLN02966, PLN02966, cytochrome P450 83A1 Back     alignment and domain information
>gnl|CDD|215371 PLN02687, PLN02687, flavonoid 3'-monooxygenase Back     alignment and domain information
>gnl|CDD|165828 PLN02183, PLN02183, ferulate 5-hydroxylase Back     alignment and domain information
>gnl|CDD|215086 PLN00168, PLN00168, Cytochrome P450; Provisional Back     alignment and domain information
>gnl|CDD|215689 pfam00067, p450, Cytochrome P450 Back     alignment and domain information
>gnl|CDD|215221 PLN02394, PLN02394, trans-cinnamate 4-monooxygenase Back     alignment and domain information
>gnl|CDD|215583 PLN03112, PLN03112, cytochrome P450 family protein; Provisional Back     alignment and domain information
>gnl|CDD|215354 PLN02655, PLN02655, ent-kaurene oxidase Back     alignment and domain information
>gnl|CDD|225035 COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 122
KOG0158499 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subf 99.93
PLN02394503 trans-cinnamate 4-monooxygenase 99.92
PF00067463 p450: Cytochrome P450 p450 superfamily signature b 99.91
PLN02971543 tryptophan N-hydroxylase 99.91
PTZ00404482 cytochrome P450; Provisional 99.9
KOG0156489 consensus Cytochrome P450 CYP2 subfamily [Secondar 99.9
PLN03234499 cytochrome P450 83B1; Provisional 99.9
PLN02183516 ferulate 5-hydroxylase 99.9
PLN02169500 fatty acid (omega-1)-hydroxylase/midchain alkane h 99.9
PLN02966502 cytochrome P450 83A1 99.9
PLN03018534 homomethionine N-hydroxylase 99.9
PLN00110504 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional 99.89
PLN02500490 cytochrome P450 90B1 99.89
PLN03195516 fatty acid omega-hydroxylase; Provisional 99.89
PLN00168519 Cytochrome P450; Provisional 99.89
KOG0157497 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfami 99.89
PLN02738633 carotene beta-ring hydroxylase 99.88
PLN02687517 flavonoid 3'-monooxygenase 99.88
PLN02426502 cytochrome P450, family 94, subfamily C protein 99.88
PLN02774463 brassinosteroid-6-oxidase 99.88
PLN02655466 ent-kaurene oxidase 99.88
PLN02290516 cytokinin trans-hydroxylase 99.87
PLN03112514 cytochrome P450 family protein; Provisional 99.87
PLN03141452 3-epi-6-deoxocathasterone 23-monooxygenase; Provis 99.87
PLN02936489 epsilon-ring hydroxylase 99.87
PLN02302490 ent-kaurenoic acid oxidase 99.86
PLN02196463 abscisic acid 8'-hydroxylase 99.85
PLN02987472 Cytochrome P450, family 90, subfamily A 99.85
KOG0159519 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 99.81
KOG0684486 consensus Cytochrome P450 [Secondary metabolites b 99.78
PLN02648480 allene oxide synthase 99.73
COG2124411 CypX Cytochrome P450 [Secondary metabolites biosyn 99.73
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information 
Probab=99.93  E-value=1.9e-26  Score=177.09  Aligned_cols=104  Identities=19%  Similarity=0.217  Sum_probs=84.0

Q ss_pred             hhhhhhhhhcCCCCCCCCCCCcCCCCcCCCCCCCcCCCcceeecCCCCCCCCChHHHHHHHHHHHHHHhhcceeEecCCC
Q 038789            7 NPEALSKATSRDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDLPY   86 (122)
Q Consensus         7 ~i~~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~~~~~~~~~~   86 (122)
                      ++.+++|++||||++||||++|+||||.+.+.+ ...+..|+|||.|+|.|+|.+||.+|+|++|+.||++|+++..+..
T Consensus       394 ~V~Ip~~alH~Dp~~~p~Pe~F~PERF~~~~~~-~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t  472 (499)
T KOG0158|consen  394 PVMIPTYALHHDPEYWPEPEKFKPERFEEENNK-SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTT  472 (499)
T ss_pred             EEEeecccccCCcccCCCcccCCCccCCCCccc-ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCcc
Confidence            355677899999999999999999999977654 4567799999999999999999999999999999999999988732


Q ss_pred             CCCccCCCCCCCCccccccc-e-eeeccCC
Q 038789           87 GHGRKIRPSHTGGSTTSYCA-F-CHLVPYH  114 (122)
Q Consensus        87 ~~~~~~~~~~~~~~~~~p~~-~-~~~~pr~  114 (122)
                      .  .. ......+....|+. . +++++|.
T Consensus       473 ~--~~-~~~~~~~~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  473 I--IP-LEGDPKGFTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             c--Cc-ccCCccceeeecCCceEEEEEeCC
Confidence            1  12 22233466677775 4 8887763

>PLN02394 trans-cinnamate 4-monooxygenase Back     alignment and domain information
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry Back     alignment and domain information
>PLN02971 tryptophan N-hydroxylase Back     alignment and domain information
>PTZ00404 cytochrome P450; Provisional Back     alignment and domain information
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN03234 cytochrome P450 83B1; Provisional Back     alignment and domain information
>PLN02183 ferulate 5-hydroxylase Back     alignment and domain information
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase Back     alignment and domain information
>PLN02966 cytochrome P450 83A1 Back     alignment and domain information
>PLN03018 homomethionine N-hydroxylase Back     alignment and domain information
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>PLN02500 cytochrome P450 90B1 Back     alignment and domain information
>PLN03195 fatty acid omega-hydroxylase; Provisional Back     alignment and domain information
>PLN00168 Cytochrome P450; Provisional Back     alignment and domain information
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism] Back     alignment and domain information
>PLN02738 carotene beta-ring hydroxylase Back     alignment and domain information
>PLN02687 flavonoid 3'-monooxygenase Back     alignment and domain information
>PLN02426 cytochrome P450, family 94, subfamily C protein Back     alignment and domain information
>PLN02774 brassinosteroid-6-oxidase Back     alignment and domain information
>PLN02655 ent-kaurene oxidase Back     alignment and domain information
>PLN02290 cytokinin trans-hydroxylase Back     alignment and domain information
>PLN03112 cytochrome P450 family protein; Provisional Back     alignment and domain information
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional Back     alignment and domain information
>PLN02936 epsilon-ring hydroxylase Back     alignment and domain information
>PLN02302 ent-kaurenoic acid oxidase Back     alignment and domain information
>PLN02196 abscisic acid 8'-hydroxylase Back     alignment and domain information
>PLN02987 Cytochrome P450, family 90, subfamily A Back     alignment and domain information
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02648 allene oxide synthase Back     alignment and domain information
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query122
3qm4_A479 Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Compl 2e-04
2f9q_A479 Crystal Structure Of Human Cytochrome P450 2d6 Leng 2e-04
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex Length = 479 Back     alignment and structure 
Iteration: 1

 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 17  RDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSN 76
           +DE+ W+    F P+ FL ++  F+ +    +PF AGRR C   PL    L+    SL  
Sbjct: 382 KDEAVWEKPFRFHPEHFLDAQGHFV-KPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQ 440
Query: 77  SFDWKLDLPYGHGRKIRPSHTG 98
            F +   +P G   + RPSH G
Sbjct: 441 HFSF--SVPTG---QPRPSHHG 457
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6 Length = 479 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query122
3n9y_A487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 7e-16
3b98_A475 Prostaglandin I2 synthase; prostacyclin synthase, 2e-15
3k9v_A482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 2e-13
3dax_A491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 6e-12
3b6h_A498 Prostacyclin synthase; enzyme-inhibitor complex, C 7e-11
2cib_A455 Cytochrome P450 51; heme, heme lipid synthesis, me 4e-09
3awm_A415 Fatty acid alpha-hydroxylase; cytochrome P450, per 3e-08
3czh_A481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 1e-07
3swz_A494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 2e-07
3qz1_A496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 2e-07
2hi4_A495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 3e-07
1izo_A417 P450bsbeta, cytochrome P450 152A1; heme protein, p 3e-07
3pm0_A507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 4e-07
3tbg_A479 Cytochrome P450 2D6; monooxygenase, thioridazine, 4e-07
2ve3_A444 Putative cytochrome P450 120; oxidoreductase, mono 3e-06
3e6i_A476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 6e-06
1r9o_A477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 7e-06
1po5_A476 Cytochrome P450 2B4; oxidoreductase, membrane prot 8e-06
2fdv_A476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 1e-05
3i3k_A461 Lanosterol 14-alpha demethylase; cytochrome P450, 2e-05
3gw9_A450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 2e-05
3dbg_A467 Putative cytochrome P450; cytochrome P450 oxidored 3e-05
3mdm_A456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 6e-04
1n97_A389 CYP175A1; electron transport; HET: SRT HEM; 1.80A 8e-04
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Length = 487 Back     alignment and structure
 Score = 71.2 bits (175), Expect = 7e-16
 Identities = 13/70 (18%), Positives = 30/70 (42%), Gaps = 2/70 (2%)

Query: 14  ATSRDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGS 73
           A  R+ + +    +F P R+L  + +     F+++ FG G R C    +    +     +
Sbjct: 381 ALGREPTFFFDPENFDPTRWLSKDKN--ITYFRNLGFGWGVRQCLGRRIAELEMTIFLIN 438

Query: 74  LSNSFDWKLD 83
           +  +F  ++ 
Sbjct: 439 MLENFRVEIQ 448
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Length = 475 Back     alignment and structure
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Length = 482 Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Length = 491 Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Length = 498 Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Length = 455 Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Length = 415 Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Length = 481 Back     alignment and structure
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Length = 494 Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Length = 496 Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Length = 495 Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Length = 417 Back     alignment and structure
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Length = 507 Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Length = 479 Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Length = 444 Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Length = 476 Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Length = 477 Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Length = 476 Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Length = 476 Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Length = 450 Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Length = 467 Back     alignment and structure
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* Length = 456 Back     alignment and structure
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A* Length = 389 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query122
3tbg_A479 Cytochrome P450 2D6; monooxygenase, thioridazine, 99.95
3ld6_A461 Lanosterol 14-alpha demethylase; cytochrome P450, 99.93
3swz_A494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 99.92
3pm0_A507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 99.92
3e6i_A476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 99.92
3czh_A481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 99.92
1po5_A476 Cytochrome P450 2B4; oxidoreductase, membrane prot 99.92
1r9o_A477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 99.91
3nxu_A485 Cytochrome P450 3A4; alpha beta protein, cytochrom 99.91
2fdv_A476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 99.91
3qz1_A496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 99.91
3k9v_A482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 99.9
3n9y_A487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 99.9
3b98_A475 Prostaglandin I2 synthase; prostacyclin synthase, 99.9
3dax_A491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 99.9
3mdm_A456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 99.9
2hi4_A495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 99.9
2ve3_A444 Putative cytochrome P450 120; oxidoreductase, mono 99.89
2cib_A455 Cytochrome P450 51; heme, heme lipid synthesis, me 99.89
3s79_A503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 99.89
3b6h_A498 Prostacyclin synthase; enzyme-inhibitor complex, C 99.89
3dbg_A467 Putative cytochrome P450; cytochrome P450 oxidored 99.88
3i3k_A461 Lanosterol 14-alpha demethylase; cytochrome P450, 99.87
4fb2_A398 P450CIN; heme, monooxygenase, cindoxin, oxidoreduc 99.86
3gw9_A450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 99.86
1izo_A417 P450bsbeta, cytochrome P450 152A1; heme protein, p 99.86
3v8d_A491 Cholesterol 7-alpha-monooxygenase; cytochrome, oxi 99.86
2ij2_A470 Cytochrome P450 BM3; monoxygenase, heme binding pr 99.86
3nc3_A441 Cytochrome P450 CYPX; cytochrome P450 oxidase, HAE 99.86
3oft_A396 Cytochrome P450, CYP101C1; oxidoreductase; HET: HE 99.85
1n97_A389 CYP175A1; electron transport; HET: SRT HEM; 1.80A 99.85
3buj_A397 CALO2; heme, iron, metal-binding, monooxygenase, o 99.85
3ejb_B404 Biotin biosynthesis cytochrome P450-like enzyme; p 99.85
1jfb_A404 Nitric-oxide reductase cytochrome P450 55A1; cytoc 99.84
2xkr_A398 CYP142, putative cytochrome P450 142; oxidoreducta 99.84
3a4g_A411 Vitamin D hydroxylase; cytochrome P450, hemoprotei 99.84
2dkk_A411 Cytochrome P450; CYP158A1, INHI oxidoreductase; HE 99.84
3lxh_A421 Cytochrome P450; heme, iron, metal-binding, monoox 99.84
1cpt_A428 Cytochrome P450-TERP; oxidoreductase(oxygenase); H 99.84
4dnj_A412 Putative cytochrome P450; oxidoreductase; HET: HEM 99.84
2cd8_A436 Cytochrome P450 monooxygenase; oxidoreductase, PIK 99.83
3aba_A403 Cytochrome P450; oxidoreductase, heme, monooxygena 99.83
3abb_A408 CYP105D6, cytochrome P450 hydroxylase; oxidoreduct 99.83
2jjn_A411 Cytochrome P450 113A1; oxidoreductase, iron, heme, 99.83
3tyw_A417 Putative cytochrome P450; P450 monooxygenase, oxid 99.83
1odo_A408 Putative cytochrome P450 154A1; P450 monooxygenase 99.83
3ivy_A433 Cytochrome P450 CYP125; cholesterol, monooxygenase 99.83
1gwi_A411 CYP154C1, cytochrome P450 154C1; oxidoreductase, m 99.83
2zwu_A415 Camphor 5-monooxygenase; P450CAM, camphor-hydroxyl 99.82
1n40_A396 P450 MT2, cytochrome P450 121; heme binding, oxyge 99.82
3rwl_A426 Cytochrome P450 alkane hydroxylase 1 CYP153A7; P45 99.82
3mgx_A415 Putative P450 monooxygenase; cytochrome P450 oxida 99.82
3awm_A415 Fatty acid alpha-hydroxylase; cytochrome P450, per 99.82
1ued_A406 P450 OXYC, P450 monooxygenase; cytochrome P450 van 99.82
2zbx_A412 Cytochrome P450-SU1; beta prism, heme, iron, metal 99.82
1q5d_A419 P450 epoxidase; cytochrome P450, epothilone, oxydo 99.82
1lfk_A398 OXYB, P450 monooxygenase; oxidative phenol couplin 99.82
1s1f_A406 Putative cytochrome P450; cytochrome P450 oxidored 99.82
2uuq_A414 CYP130, cytochrome P450 130; iron, heme, monooxyge 99.82
2y5n_A417 MYCG, P-450-like protein; oxidoreductase, mycinami 99.81
2z36_A413 MOXA, cytochrome P450 type compactin 3'',4''- hydr 99.81
2rfb_A343 Cytochrome P450; heme, iron, metal-binding, monoox 99.81
1io7_A368 Cytochrome P450 CYP119; thermophilic, cytochromo P 99.81
2z3t_A425 Cytochrome P450; monoxygenase, oxydoreductase, hem 99.81
3b4x_A367 367AA long hypothetical cytochrome P450; HEM prote 99.81
1z8o_A404 6-deoxyerythronolide B hydroxylase; heme, CYP, ery 99.8
2wiy_A394 XPLA-heme, cytochrome P450-like protein XPLA; CYT- 99.8
2xbk_A404 PIMD protein; epoxidation, oxidoreductase; HET: HE 99.8
3r9b_A418 Cytochrome P450 164A2; monooxygenase, oxidoreducta 99.79
4dxy_A417 Cytochrome P450, CYP101D2; cytochrome P450 mutant, 99.79
3dan_A473 Cytochrome P450 74A2; AOS heme cytochrome P450 str 99.78
3tkt_A450 Cytochrome P450; aromatic hydrocarbon binding of P 99.78
3p3o_A416 Cytochrome P450; monooxygenase, oxidoreductase; HE 99.78
2wm5_A435 CYP124, putative cytochrome P450 124; metal-bindin 99.77
3dsk_A495 Cytochrome P450 74A, chloroplast; P450 fold, fatty 99.76
2yjn_B381 Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; 99.74
3oo3_A384 OXY protein; cytochrome P450, monooxygenase, PCD-t 99.67
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Back     alignment and structure
Probab=99.95  E-value=2.3e-28  Score=183.93  Aligned_cols=102  Identities=25%  Similarity=0.385  Sum_probs=84.1

Q ss_pred             hhhhhhcCCCCCCCCCCCcCCCCcCCCCCCCcCCCcceeecCCCCCCCCChHHHHHHHHHHHHHHhhcceeEecCCCCCC
Q 038789           10 ALSKATSRDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDLPYGHG   89 (122)
Q Consensus        10 ~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~~~~~~~~~~~~~   89 (122)
                      ++.|++||||++|+||++|+||||++.++.. ..+..|+|||+|+|.|+|++||.+|+++++|.|+++|+++++++..  
T Consensus       375 ~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~~-~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--  451 (479)
T 3tbg_A          375 TNLSSVLKDEAVWEKPFRFHPEHFLDAQGHF-VKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQP--  451 (479)
T ss_dssp             EEHHHHHTCTTTSSSTTSCCGGGGBCTTCCB-CCCTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEECCTTSC--
T ss_pred             echhhhcCChhhCCCccccCccccCCCCccc-CCCCceecCCCCCcCChhHHHHHHHHHHHHHHHHHccEEEeCCCCC--
Confidence            4556999999999999999999999766542 3456799999999999999999999999999999999999987632  


Q ss_pred             ccCCCCCCCCccccccce-eeeccCCc
Q 038789           90 RKIRPSHTGGSTTSYCAF-CHLVPYHN  115 (122)
Q Consensus        90 ~~~~~~~~~~~~~~p~~~-~~~~pr~~  115 (122)
                       ........+++..|.++ ++++||..
T Consensus       452 -~~~~~~~~~~~~~P~~~~v~~~pRs~  477 (479)
T 3tbg_A          452 -RPSHHGVFAFLVSPSPYELCAVPRHH  477 (479)
T ss_dssp             -CCCSCEEESSSEEECCCCBEEEEC--
T ss_pred             -CccccccceeeecCCCeEEEEEECCC
Confidence             22333445777888898 99999974
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A* Back     alignment and structure
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Back     alignment and structure
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Back     alignment and structure
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A* Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Back     alignment and structure
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Back     alignment and structure
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Back     alignment and structure
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Back     alignment and structure
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A* Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A* Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Back     alignment and structure
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A* Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Back     alignment and structure
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A* Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Back     alignment and structure
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A* Back     alignment and structure
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A* Back     alignment and structure
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A* Back     alignment and structure
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora} Back     alignment and structure
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B* Back     alignment and structure
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A* Back     alignment and structure
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A* Back     alignment and structure
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A* Back     alignment and structure
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A* Back     alignment and structure
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1 Back     alignment and structure
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A* Back     alignment and structure
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A* Back     alignment and structure
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A* Back     alignment and structure
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis} Back     alignment and structure
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A* Back     alignment and structure
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A* Back     alignment and structure
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A* Back     alignment and structure
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ... Back     alignment and structure
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A* Back     alignment and structure
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida} Back     alignment and structure
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina} Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Back     alignment and structure
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1 Back     alignment and structure
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A* Back     alignment and structure
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A* Back     alignment and structure
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A* Back     alignment and structure
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A* Back     alignment and structure
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A* Back     alignment and structure
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A* Back     alignment and structure
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena} Back     alignment and structure
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A* Back     alignment and structure
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A* Back     alignment and structure
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A* Back     alignment and structure
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A* Back     alignment and structure
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A* Back     alignment and structure
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A* Back     alignment and structure
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A* Back     alignment and structure
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A* Back     alignment and structure
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A* Back     alignment and structure
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A* Back     alignment and structure
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} Back     alignment and structure
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A* Back     alignment and structure
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A* Back     alignment and structure
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A* Back     alignment and structure
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Back     alignment and structure
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 122
d1po5a_465 a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabb 6e-11
d1r9oa_467 a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Huma 5e-10
d2ciba1445 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-stero 7e-10
d3czha1463 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2 8e-10
d1tqna_472 a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Huma 2e-09
d2ij2a1453 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus 3e-07
d1izoa_411 a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Ba 6e-06
d1n97a_385 a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [Tax 8e-05
d1cpta_428 a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas s 2e-04
d1z8oa1402 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharo 2e-04
d1jfba_399 a.104.1.1 (A:) Cytochrome P450-NOR, nitric reducta 2e-04
d1ueda_403 a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatops 4e-04
d1odoa_401 a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyce 7e-04
d1lfka_394 a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatops 0.001
d1q5da_401 a.104.1.1 (A:) Cytochrome P450epok {Sorangium cell 0.002
d1s1fa_399 a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [ 0.002
d1n40a_395 a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2) {My 0.003
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 465 Back     information, alignment and structure

class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Mammalian cytochrome p450 2b4
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 55.8 bits (133), Expect = 6e-11
 Identities = 20/98 (20%), Positives = 36/98 (36%), Gaps = 2/98 (2%)

Query: 17  RDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSN 76
            D   ++  ++F P  FL +      RN   +PF  G+RIC    +  T L+    ++  
Sbjct: 370 HDPRYFETPNTFNPGHFLDANGALK-RNEGFMPFSLGKRICLGEGIARTELFLFFTTILQ 428

Query: 77  SFDWKLDLPYGHGRKIRPSHTGGSTTSYCAFCHLVPYH 114
           +F     +P      + P  +G            +  H
Sbjct: 429 NFSIASPVP-PEDIDLTPRESGVGNVPPSYQIRFLARH 465
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Length = 467 Back     information, alignment and structure
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 445 Back     information, alignment and structure
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Length = 463 Back     information, alignment and structure
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Length = 472 Back     information, alignment and structure
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Length = 453 Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Length = 411 Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Length = 385 Back     information, alignment and structure
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306]} Length = 428 Back     information, alignment and structure
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora erythraea [TaxId: 1836]} Length = 402 Back     information, alignment and structure
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase {Fungus (Fusarium oxysporum) [TaxId: 5507]} Length = 399 Back     information, alignment and structure
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]} Length = 403 Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Length = 401 Back     information, alignment and structure
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis orientalis [TaxId: 31958]} Length = 394 Back     information, alignment and structure
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum [TaxId: 56]} Length = 401 Back     information, alignment and structure
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} Length = 399 Back     information, alignment and structure
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 395 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query122
d3czha1463 Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapie 99.94
d1r9oa_467 Mammalian cytochrome p450 2c9 {Human (Homo sapiens 99.94
d1po5a_465 Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus 99.93
d1tqna_472 Mammalian cytochrome P450 3a4 {Human (Homo sapiens 99.93
d2ciba1445 Cytochrome p450 14 alpha-sterol demethylase (cyp51 99.92
d2ij2a1453 Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 99.9
d1izoa_411 Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis 99.9
d1odoa_401 Cyp154a1 monooxygenase {Streptomyces coelicolor [T 99.88
d1cpta_428 Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306] 99.87
d1q5da_401 Cytochrome P450epok {Sorangium cellulosum [TaxId: 99.86
d1jfba_399 Cytochrome P450-NOR, nitric reductase {Fungus (Fus 99.86
d1n97a_385 Cyp175a1 {Thermus thermophilus [TaxId: 274]} 99.85
d1ueda_403 p450 monoxygenase OxyC {Amycolatopsis orientalis [ 99.84
d1z8oa1402 Cytochrome P450-ERYF {Saccharopolyspora erythraea 99.84
d1s1fa_399 Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} 99.83
d1gwia_403 Cyp154c1 monooxygenase {Streptomyces coelicolor [T 99.82
d1io7a_366 Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2 99.82
d1lfka_394 p450 monoxygenase OxyB {Amycolatopsis orientalis [ 99.82
d1ue8a_367 Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 11195 99.81
d1re9a_404 Cytochrome P450-CAM {Pseudomonas putida [TaxId: 30 99.79
d1n40a_395 Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tub 99.76
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Vitamin D 25-hydroxylase Cyp2R1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.1e-27  Score=175.79  Aligned_cols=100  Identities=21%  Similarity=0.256  Sum_probs=84.1

Q ss_pred             hhhhhhcCCCCCCCCCCCcCCCCcCCCCCCCcCCCcceeecCCCCCCCCChHHHHHHHHHHHHHHhhcceeEecCCCCCC
Q 038789           10 ALSKATSRDESTWDHAHSFMPKRFLGSEVDFIGRNFKSIPFGAGRRICPDLPLDITMLYPLRGSLSNSFDWKLDLPYGHG   89 (122)
Q Consensus        10 ~~~~~~~~d~~~~~dp~~F~P~Rfl~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~la~ll~~~~~~~~~~~~~~   89 (122)
                      ++.+++|+||++|+||++|+||||++.+.. ......++|||+|+|.|+|+++|.+|+++++|.|+++|+++++++.   
T Consensus       363 ~~~~~~~~d~~~~~dp~~F~PeRfl~~~~~-~~~~~~~~~FG~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~---  438 (463)
T d3czha1         363 TNLYSVHFDEKYWRDPEVFHPERFLDSSGY-FAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHEL---  438 (463)
T ss_dssp             EEHHHHHTCTTTCSSTTSCCGGGGBCTTSC-BCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECGGGC---
T ss_pred             CcHHHhhCCcccCCChhhcCccccCCCccc-cCCCCceeCCCCCCcCCchHHHHHHHHHHHHHHHHHhcEEEeCCCC---
Confidence            455699999999999999999999976643 2345679999999999999999999999999999999999997652   


Q ss_pred             ccCCCCCCCCccccccce-eeeccCC
Q 038789           90 RKIRPSHTGGSTTSYCAF-CHLVPYH  114 (122)
Q Consensus        90 ~~~~~~~~~~~~~~p~~~-~~~~pr~  114 (122)
                       ..+.....+++..|.++ +++++|+
T Consensus       439 -~~~~~~~~~~~~~p~~~~v~~~~R~  463 (463)
T d3czha1         439 -VPDLKPRLGMTLQPQPYLICAERRH  463 (463)
T ss_dssp             -CCCCCCCSSSSCCCCCCCBEEEECC
T ss_pred             -CCCceeccCeEEeccCcEEEEEeCc
Confidence             23345566777778888 9999885
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306]} Back     information, alignment and structure
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum [TaxId: 56]} Back     information, alignment and structure
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase {Fungus (Fusarium oxysporum) [TaxId: 5507]} Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora erythraea [TaxId: 1836]} Back     information, alignment and structure
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 111955]} Back     information, alignment and structure
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure