Citrus Sinensis ID: 038817

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300---
MVTSGLAALGYQYINLDDCWAELNRDSTGNFVPKASAFPAGIKALADYVHAKGLKLGIYSDAGTQTCSKTMPGSLGHEEQDAKTFASWGVDYLKYDNCFNTGTSPKERYPIMSKALLNSGRPIFFSLCEWGREDPATWAPKIGNSWRTTGDIKDNWNSMTSLADQNDKWASYAGPGGYNDPDMLEVGNGGMTTEEYRAHFSIWALAKAPLLIGCDIRAMDKITFNILSNKEVIAVNQDKLGVQGKKVKKEGDLEVWAGPLSGNRVAVVLWNRGSSKATVTANWSDIGLKLNHSTVVNARDLWQ
ccccccHHccccEEEEcccccccccccccccEEccccccccHHHHHHHHHHcccEEEEEccccccccccccccccccHHHHHHHHHHcccEEEccccccccccccccccHHHHHHHHHccccEEEEcccccccccccHHccccccEEEccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccHHHHHccccHHHHHHcccccccccEEEEEcccEEEEEEEcccccEEEEEEEcccccEEEEEEccccccccccccEEEEEEccc
HHHccHHHHcccEEEcccccEcccccccccccEccccccccHHHHHHHHHHcccEEEEEEEcccEccccccEcccccHHHHHHHHHHHcccEEEEEccccccccHHHHHHHHHHHHHHHccccEEEEEccccccHHHcHHHcccEEEccccccccHHHHHHHHHHHHccHHHcEccEEEEccccccccccccHHHHHHHHHHHHHccccEEEccccccccHHHHHHHccHHHHHHHccccccccEEEEEEccEEEEEEEcccccEEEEEEEcccccEEEEEEHHHcccccccccEEEEEEccc
MVTSGLAALGYQYINLDDCwaelnrdstgnfvpkasafpAGIKALADYVHAKGlklgiysdagtqtcsktmpgslgheeqdAKTFASWgvdylkydncfntgtspkeryPIMSKALlnsgrpiffslcewgredpatwapkignswrttgdikdnwnsmtsladqndkwasyagpggyndpdmlevgnggmttEEYRAHFSIWALakaplligcdiramDKITFNILSNKEVIAVNqdklgvqgkkvkkegdlevwagplsgnRVAVVLWNrgsskatvtanwsdiglklnhstvVNARDLWQ
MVTSGLAALGYQYINLDDCWAELNRDSTGNFVPKASAFPAGIKALADYVHAKGLKLGIYSDAGTQTCSKTMPGSLGHEEQDAKTFASWGVDYLKYDNCFNTGTSPKERYPIMSKALLNSGRPIFFSLCEWGREdpatwapkignswrTTGDIKDNWNSMTSLADQNDKWASYAGPGGYNDPDMLEVGNGGMTTEEYRAHFSIWALAKAPLLIGCDIRAMDKITFNILSNKEVIavnqdklgvqgkkvkkegdlevwagplsgnRVAVVLWNRGsskatvtanwsdiglklnhstvvnardlwq
MVTSGLAALGYQYINLDDCWAELNRDSTGNFVPKASAFPAGIKALADYVHAKGLKLGIYSDAGTQTCSKTMPGSLGHEEQDAKTFASWGVDYLKYDNCFNTGTSPKERYPIMSKALLNSGRPIFFSLCEWGREDPATWAPKIGNSWRTTGDIKDNWNSMTSLADQNDKWASYAGPGGYNDPDMLEVGNGGMTTEEYRAHFSIWALAKAPLLIGCDIRAMDKITFNILSNKEVIAVNQDKLGVQGKKVKKEGDLEVWAGPLSGNRVAVVLWNRGSSKATVTANWSDIGLKLNHSTVVNARDLWQ
*****LAALGYQYINLDDCWAELNRDSTGNFVPKASAFPAGIKALADYVHAKGLKLGIYSDAGTQTC**************AKTFASWGVDYLKYDNCFNTGTSPKERYPIMSKALLNSGRPIFFSLCEWGREDPATWAPKIGNSWRTTGDIKDNWNSMTSLADQNDKWASYAGPGGYNDPDMLEVGNGGMTTEEYRAHFSIWALAKAPLLIGCDIRAMDKITFNILSNKEVIAVNQDKLGVQGKKVKKEGDLEVWAGPLSGNRVAVVLWNRGSSKATVTANWSDIGLKLNHSTVVNA*****
M*TSGLAALGYQYINLDDCWAELNRDSTGNFVPKASAFPAGIKALADYVHAKGLKLGIYSDAGTQTCSKTMPGSLGHEEQDAKTFASWGVDYLKYDNCFNTGTSPKERYPIMSKALLNSGRPIFFSLCEWGREDPATWAPKIGNSWRTTGDIKDNWNSMTSLADQNDKWASYAGPGGYNDPDMLEVGNGGMTTEEYRAHFSIWALAKAPLLIGCDIRAMDKITFNILSNKEVIAVNQDKLGVQGKKVKKEGDLEVWAGPLSGNRVAVVLWNRGSSKATVTANWSDIGLKLNHSTVVNARDLWQ
MVTSGLAALGYQYINLDDCWAELNRDSTGNFVPKASAFPAGIKALADYVHAKGLKLGIYSDAGTQTCSKTMPGSLGHEEQDAKTFASWGVDYLKYDNCFNTGTSPKERYPIMSKALLNSGRPIFFSLCEWGREDPATWAPKIGNSWRTTGDIKDNWNSMTSLADQNDKWASYAGPGGYNDPDMLEVGNGGMTTEEYRAHFSIWALAKAPLLIGCDIRAMDKITFNILSNKEVIAVNQDKLGVQGKKVKKEGDLEVWAGPLSGNRVAVVLWNRGSSKATVTANWSDIGLKLNHSTVVNARDLWQ
*VTSGLAALGYQYINLDDCWAELNRDSTGNFVPKASAFPAGIKALADYVHAKGLKLGIYSDAGTQTCSKTMPGSLGHEEQDAKTFASWGVDYLKYDNCFNTGTSPKERYPIMSKALLNSGRPIFFSLCEWGREDPATWAPKIGNSWRTTGDIKDNWNSMTSLADQNDKWASYAGPGGYNDPDMLEVGNGGMTTEEYRAHFSIWALAKAPLLIGCDIRAMDKITFNILSNKEVIAVNQDKLGVQGKKVKKEGDLEVWAGPLSGNRVAVVLWNRGSSKATVTANWSDIGLKLNHSTVVNARDLWQ
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MVTSGLAALGYQYINLDDCWAELNRDSTGNFVPKASAFPAGIKALADYVHAKGLKLGIYSDAGTQTCSKTMPGSLGHEEQDAKTFASWGVDYLKYDNCFNTGTSPKERYPIMSKALLNSGRPIFFSLCEWGREDPATWAPKIGNSWRTTGDIKDNWNSMTSLADQNDKWASYAGPGGYNDPDMLEVGNGGMTTEEYRAHFSIWALAKAPLLIGCDIRAMDKITFNILSNKEVIAVNQDKLGVQGKKVKKEGDLEVWAGPLSGNRVAVVLWNRGSSKATVTANWSDIGLKLNHSTVVNARDLWQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query303 2.2.26 [Sep-21-2011]
Q42656378 Alpha-galactosidase OS=Co N/A no 0.990 0.793 0.844 1e-150
P14749411 Alpha-galactosidase OS=Cy N/A no 0.993 0.732 0.821 1e-148
Q9FXT4417 Alpha-galactosidase OS=Or yes no 0.990 0.719 0.741 1e-132
Q55B10385 Probable alpha-galactosid yes no 0.983 0.774 0.509 6e-84
B3PGJ1404 Alpha-galactosidase A OS= yes no 0.927 0.695 0.515 8e-79
A4DA70 648 Probable alpha-galactosid yes no 0.983 0.459 0.419 2e-66
B0YEK2 648 Probable alpha-galactosid N/A no 0.983 0.459 0.419 2e-66
A1D9S3 648 Probable alpha-galactosid N/A no 0.983 0.459 0.416 2e-65
Q90744405 Alpha-N-acetylgalactosami yes no 0.894 0.669 0.450 3e-64
Q99172469 Alpha-galactosidase OS=Zy N/A no 0.937 0.605 0.414 2e-63
>sp|Q42656|AGAL_COFAR Alpha-galactosidase OS=Coffea arabica PE=1 SV=1 Back     alignment and function desciption
 Score =  530 bits (1364), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 255/302 (84%), Positives = 270/302 (89%), Gaps = 2/302 (0%)

Query: 1   MVTSGLAALGYQYINLDDCWAELNRDSTGNFVPKASAFPAGIKALADYVHAKGLKLGIYS 60
           MV+ GLAALGY+YINLDDCWAELNRDS GN VPK S FP+GIKALADYVH+KGLKLGIYS
Sbjct: 50  MVSKGLAALGYKYINLDDCWAELNRDSQGNLVPKGSTFPSGIKALADYVHSKGLKLGIYS 109

Query: 61  DAGTQTCSKTMPGSLGHEEQDAKTFASWGVDYLKYDNCFNTGTSPKERYPIMSKALLNSG 120
           DAGTQTCSKTMPGSLGHEEQDAKTFASWGVDYLKYDNC N   SPKERYPIMSKALLNSG
Sbjct: 110 DAGTQTCSKTMPGSLGHEEQDAKTFASWGVDYLKYDNCNNNNISPKERYPIMSKALLNSG 169

Query: 121 RPIFFSLCEWGREDPATWAPKIGNSWRTTGDIKDNWNSMTSLADQNDKWASYAGPGGYND 180
           R IFFSLCEWG EDPATWA ++GNSWRTTGDI D+W+SMTS AD NDKWASYAGPGG+ND
Sbjct: 170 RSIFFSLCEWGEEDPATWAKEVGNSWRTTGDIDDSWSSMTSRADMNDKWASYAGPGGWND 229

Query: 181 PDMLEVGNGGMTTEEYRAHFSIWALAKAPLLIGCDIRAMDKITFNILSNKEVIAVNQDKL 240
           PDMLEVGNGGMTT EYR+HFSIWALAKAPLLIGCDIR+MD  TF +LSN EVIAVNQDKL
Sbjct: 230 PDMLEVGNGGMTTTEYRSHFSIWALAKAPLLIGCDIRSMDGATFQLLSNAEVIAVNQDKL 289

Query: 241 GVQGKKVKKEGDLEVWAGPLSGNRVAVVLWNRGSSKATVTANWSDIGLKLNHSTVVNARD 300
           GVQG KVK  GDLEVWAGPLSG RVAV LWNRGSS AT+TA WSD+GL    + VVNARD
Sbjct: 290 GVQGNKVKTYGDLEVWAGPLSGKRVAVALWNRGSSTATITAYWSDVGLP--STAVVNARD 347

Query: 301 LW 302
           LW
Sbjct: 348 LW 349
Preferentially cleaves alpha-1,3 and alpha-1,4 glycoside linkages. Involved in the hydrolysis of the galactomannan, it splits alpha-linked galactose moieties. It is particularly suitable for the hydrolysis of guar gum to a gum with improved gelling properties. Can cleave terminal alpha-1,3-linked galactose residues responsible for blood group B specificity from the surface of erythrocytes thereby converting these cells serologically to group O.
Coffea arabica (taxid: 13443)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 2
>sp|P14749|AGAL_CYATE Alpha-galactosidase OS=Cyamopsis tetragonoloba PE=1 SV=1 Back     alignment and function description
>sp|Q9FXT4|AGAL_ORYSJ Alpha-galactosidase OS=Oryza sativa subsp. japonica GN=Os10g0493600 PE=1 SV=1 Back     alignment and function description
>sp|Q55B10|AGAL_DICDI Probable alpha-galactosidase OS=Dictyostelium discoideum GN=melA PE=3 SV=1 Back     alignment and function description
>sp|B3PGJ1|AGAL_CELJU Alpha-galactosidase A OS=Cellvibrio japonicus (strain Ueda107) GN=agaA PE=1 SV=1 Back     alignment and function description
>sp|A4DA70|AGALD_ASPFU Probable alpha-galactosidase D OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=aglD PE=3 SV=2 Back     alignment and function description
>sp|B0YEK2|AGALD_ASPFC Probable alpha-galactosidase D OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=aglD PE=3 SV=2 Back     alignment and function description
>sp|A1D9S3|AGALD_NEOFI Probable alpha-galactosidase D OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=aglD PE=3 SV=1 Back     alignment and function description
>sp|Q90744|NAGAB_CHICK Alpha-N-acetylgalactosaminidase OS=Gallus gallus GN=NAGA PE=1 SV=1 Back     alignment and function description
>sp|Q99172|MEL_ZYGCI Alpha-galactosidase OS=Zygosaccharomyces cidri GN=MEL PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query303
224118658367 predicted protein [Populus trichocarpa] 0.990 0.817 0.844 1e-150
255569397 415 alpha-galactosidase/alpha-n-acetylgalact 0.993 0.725 0.844 1e-149
2492782378 RecName: Full=Alpha-galactosidase; AltNa 0.990 0.793 0.844 1e-148
60417424 420 alpha galactosidase [Coffea arabica] 0.990 0.714 0.837 1e-147
60417426378 alpha-galactosidase [Coffea canephora] 0.990 0.793 0.841 1e-147
10178279365 alpha-galactosidase-like protein [Arabid 0.993 0.824 0.808 1e-147
18415796396 alpha-galactosidase 2 [Arabidopsis thali 0.993 0.760 0.808 1e-147
79327298370 alpha-galactosidase 2 [Arabidopsis thali 0.993 0.813 0.808 1e-146
29335747 428 alpha-galactosidase [Helianthus annuus] 0.990 0.700 0.814 1e-146
113497 411 RecName: Full=Alpha-galactosidase; AltNa 0.993 0.732 0.821 1e-146
>gi|224118658|ref|XP_002331416.1| predicted protein [Populus trichocarpa] gi|222873630|gb|EEF10761.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  536 bits (1382), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 255/302 (84%), Positives = 276/302 (91%), Gaps = 2/302 (0%)

Query: 1   MVTSGLAALGYQYINLDDCWAELNRDSTGNFVPKASAFPAGIKALADYVHAKGLKLGIYS 60
           MV+SGLAALGY+++NLDDCWAELNRDS GN VPKAS FP+GIKALADY+H KGLKLGIYS
Sbjct: 39  MVSSGLAALGYEHVNLDDCWAELNRDSEGNLVPKASTFPSGIKALADYIHGKGLKLGIYS 98

Query: 61  DAGTQTCSKTMPGSLGHEEQDAKTFASWGVDYLKYDNCFNTGTSPKERYPIMSKALLNSG 120
           DAG+QTCS TMPGSLGHEEQDAKTFASWGVDYLKYDNC N GTSPKERYP+MSKALLNSG
Sbjct: 99  DAGSQTCSGTMPGSLGHEEQDAKTFASWGVDYLKYDNCNNDGTSPKERYPVMSKALLNSG 158

Query: 121 RPIFFSLCEWGREDPATWAPKIGNSWRTTGDIKDNWNSMTSLADQNDKWASYAGPGGYND 180
           RPIFFSLCEWG+EDPATWA  +GNSWRTTGDI DNW+SMTS ADQND+WASYA PGG+ND
Sbjct: 159 RPIFFSLCEWGQEDPATWASNVGNSWRTTGDISDNWDSMTSRADQNDQWASYAAPGGWND 218

Query: 181 PDMLEVGNGGMTTEEYRAHFSIWALAKAPLLIGCDIRAMDKITFNILSNKEVIAVNQDKL 240
           PDMLEVGNGGMTTEEYR+HFSIWALAKAPLLIGCD+R M   T  ILSN+EVIAVNQDKL
Sbjct: 219 PDMLEVGNGGMTTEEYRSHFSIWALAKAPLLIGCDVRTMSDETIEILSNREVIAVNQDKL 278

Query: 241 GVQGKKVKKEGDLEVWAGPLSGNRVAVVLWNRGSSKATVTANWSDIGLKLNHSTVVNARD 300
           GVQGKKVK  GDLEVWAGPLS N++AVVLWNRGSS+ATVTA WSDIG  L+ +T VNARD
Sbjct: 279 GVQGKKVKNNGDLEVWAGPLSNNKIAVVLWNRGSSRATVTAYWSDIG--LDPTTTVNARD 336

Query: 301 LW 302
           LW
Sbjct: 337 LW 338

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255569397|ref|XP_002525666.1| alpha-galactosidase/alpha-n-acetylgalactosaminidase, putative [Ricinus communis] gi|223535102|gb|EEF36784.1| alpha-galactosidase/alpha-n-acetylgalactosaminidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|2492782|sp|Q42656.1|AGAL_COFAR RecName: Full=Alpha-galactosidase; AltName: Full=Alpha-D-galactoside galactohydrolase; AltName: Full=Melibiase; Flags: Precursor gi|504489|gb|AAA33022.1| alpha-galactosidase [Coffea arabica] Back     alignment and taxonomy information
>gi|60417424|emb|CAI47559.1| alpha galactosidase [Coffea arabica] Back     alignment and taxonomy information
>gi|60417426|emb|CAI47560.1| alpha-galactosidase [Coffea canephora] Back     alignment and taxonomy information
>gi|10178279|emb|CAC08337.1| alpha-galactosidase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|18415796|ref|NP_568193.1| alpha-galactosidase 2 [Arabidopsis thaliana] gi|19699069|gb|AAL90902.1| AT5g08370/F8L15_100 [Arabidopsis thaliana] gi|21553660|gb|AAM62753.1| alpha-galactosidase-like protein [Arabidopsis thaliana] gi|23308433|gb|AAN18186.1| At5g08370/F8L15_100 [Arabidopsis thaliana] gi|332003907|gb|AED91290.1| alpha-galactosidase 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|79327298|ref|NP_001031855.1| alpha-galactosidase 2 [Arabidopsis thaliana] gi|222423840|dbj|BAH19885.1| AT5G08370 [Arabidopsis thaliana] gi|332003908|gb|AED91291.1| alpha-galactosidase 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|29335747|dbj|BAC66445.1| alpha-galactosidase [Helianthus annuus] Back     alignment and taxonomy information
>gi|113497|sp|P14749.1|AGAL_CYATE RecName: Full=Alpha-galactosidase; AltName: Full=Alpha-D-galactoside galactohydrolase; AltName: Full=Melibiase; Flags: Precursor gi|18292|emb|CAA32772.1| alpha-galactosidase preproprotein [Cyamopsis tetragonoloba] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query303
TAIR|locus:2150763396 AGAL2 "alpha-galactosidase 2" 0.993 0.760 0.808 2.7e-139
UNIPROTKB|Q9FXT4417 LOC_Os10g35110 "Alpha-galactos 0.990 0.719 0.741 1.9e-124
TAIR|locus:2150778410 AGAL1 "alpha-galactosidase 1" 0.993 0.734 0.676 3.4e-116
TAIR|locus:2078416437 AT3G56310 [Arabidopsis thalian 0.986 0.684 0.664 6.8e-111
UNIPROTKB|Q7XIV4425 OJ1409_C08.26 "Os07g0679300 pr 0.990 0.705 0.647 7e-109
UNIPROTKB|Q23DW6381 TTHERM_00043770 "Alpha-galacto 0.976 0.776 0.566 2.1e-93
UNIPROTKB|Q23YJ0382 TTHERM_01181990 "Melibiase fam 0.940 0.746 0.569 6.3e-92
UNIPROTKB|Q9S2C9 680 Q9S2C9 "Probable secreted alph 0.990 0.441 0.537 2.4e-85
DICTYBASE|DDB_G0271490385 melA "putative alpha-galactosi 0.983 0.774 0.513 1.5e-81
UNIPROTKB|B3PGJ1404 agaA "Alpha-galactosidase A" [ 0.927 0.695 0.522 2.1e-75
TAIR|locus:2150763 AGAL2 "alpha-galactosidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1363 (484.9 bits), Expect = 2.7e-139, P = 2.7e-139
 Identities = 245/303 (80%), Positives = 275/303 (90%)

Query:     1 MVTSGLAALGYQYINLDDCWAELNRDSTGNFVPKASAFPAGIKALADYVHAKGLKLGIYS 60
             MV+SGL+A+GY+YIN+DDCW EL RDS G+ V KAS FP+GIKAL+DYVH+KGLKLGIYS
Sbjct:    66 MVSSGLSAIGYKYINIDDCWGELKRDSQGSLVAKASTFPSGIKALSDYVHSKGLKLGIYS 125

Query:    61 DAGTQTCSKTMPGSLGHEEQDAKTFASWGVDYLKYDNCFNTGTSPKERYPIMSKALLNSG 120
             DAGT TCS+TMPGSLGHEEQDAKTFASWG+DYLKYDNC NTGTSP+ERYP MSKALLNSG
Sbjct:   126 DAGTLTCSQTMPGSLGHEEQDAKTFASWGIDYLKYDNCENTGTSPRERYPKMSKALLNSG 185

Query:   121 RPIFFSLCEWGREDPATWAPKIGNSWRTTGDIKDNWNSMTSLADQNDKWASYAGPGGYND 180
             R IFFSLCEWG+EDPATWA  IGNSWRTTGDI+DNW SMT +ADQND+WASYA PG +ND
Sbjct:   186 RSIFFSLCEWGQEDPATWAGDIGNSWRTTGDIQDNWKSMTLIADQNDRWASYARPGSWND 245

Query:   181 PDMLEVGNGGMTTEEYRAHFSIWALAKAPLLIGCDIRAMDKITFNILSNKEVIAVNQDKL 240
             PDMLEVGNGGMT EEY +HFSIWALAKAPLLIGCD+R+MDK+TF +LSNKEVIAVNQDKL
Sbjct:   246 PDMLEVGNGGMTKEEYMSHFSIWALAKAPLLIGCDLRSMDKVTFELLSNKEVIAVNQDKL 305

Query:   241 GVQGKKVKKEGDLEVWAGPLSGNRVAVVLWNRGSSKATVTANWSDIGLKLNHSTVVNARD 300
             G+QGKKVKKEGDLEVWAGPLS  RVAV+LWNRGS+ A +TA W++IGL  N S +VNARD
Sbjct:   306 GIQGKKVKKEGDLEVWAGPLSKKRVAVILWNRGSASANITARWAEIGL--NSSDIVNARD 363

Query:   301 LWQ 303
             LW+
Sbjct:   364 LWE 366
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA
GO:0004557 "alpha-galactosidase activity" evidence=ISS;IBA
GO:0005576 "extracellular region" evidence=ISM
GO:0005737 "cytoplasm" evidence=IBA
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0009311 "oligosaccharide metabolic process" evidence=IBA
GO:0016139 "glycoside catabolic process" evidence=IBA
GO:0046477 "glycosylceramide catabolic process" evidence=IBA
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0009911 "positive regulation of flower development" evidence=IMP
GO:0009965 "leaf morphogenesis" evidence=IMP
GO:0000023 "maltose metabolic process" evidence=RCA
GO:0007020 "microtubule nucleation" evidence=RCA
GO:0019252 "starch biosynthetic process" evidence=RCA
GO:0043085 "positive regulation of catalytic activity" evidence=RCA
UNIPROTKB|Q9FXT4 LOC_Os10g35110 "Alpha-galactosidase" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2150778 AGAL1 "alpha-galactosidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2078416 AT3G56310 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q7XIV4 OJ1409_C08.26 "Os07g0679300 protein" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q23DW6 TTHERM_00043770 "Alpha-galactosidase, putative" [Tetrahymena thermophila SB210 (taxid:312017)] Back     alignment and assigned GO terms
UNIPROTKB|Q23YJ0 TTHERM_01181990 "Melibiase family protein" [Tetrahymena thermophila SB210 (taxid:312017)] Back     alignment and assigned GO terms
UNIPROTKB|Q9S2C9 Q9S2C9 "Probable secreted alpha-galactosidase" [Streptomyces coelicolor A3(2) (taxid:100226)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0271490 melA "putative alpha-galactosidase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|B3PGJ1 agaA "Alpha-galactosidase A" [Cellvibrio japonicus Ueda107 (taxid:498211)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q42656AGAL_COFAR3, ., 2, ., 1, ., 2, 20.84430.99000.7936N/Ano
Q55B10AGAL_DICDI3, ., 2, ., 1, ., 2, 20.50980.98340.7740yesno
Q9FXT4AGAL_ORYSJ3, ., 2, ., 1, ., 2, 20.74170.99000.7194yesno
B3PGJ1AGAL_CELJU3, ., 2, ., 1, ., 2, 20.51520.92730.6955yesno
P14749AGAL_CYATE3, ., 2, ., 1, ., 2, 20.82170.99330.7323N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.220.991
3rd Layer3.2.10.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pg.C_scaffold_164000005
alpha-galactosidase (EC-3.2.1.22) (367 aa)
(Populus trichocarpa)
Predicted Functional Partners:
gw1.X.2350.1
hypothetical protein (442 aa)
  •  •  0.916
gw1.148.154.1
hypothetical protein (545 aa)
  •  •  0.915
estExt_Genewise1_v1.C_LG_VIII1629
hypothetical protein (458 aa)
  •  •  0.915
gw1.44.267.1
hypothetical protein (643 aa)
     •  0.911
gw1.XIX.1583.1
alpha-galactosidase (380 aa)
  •  • •0.902
fgenesh4_pm.C_LG_IV000085
hypothetical protein (379 aa)
  •  • •0.901
gw1.X.3030.1
alpha-galactosidase (EC-2.4.1.67) (369 aa)
  •  • •0.901
eugene3.00101110
alpha-galactosidase (EC-3.2.1.22) (386 aa)
  •  • •0.901
gw1.VI.1302.1
galactokinase (EC-2.7.1.6) (413 aa)
     •  0.899
fgenesh4_pm.C_scaffold_152000030
1,2-diacylglycerol 3-beta-galactosyltransferase (EC-2.4.1.46) (411 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query303
PLN02808386 PLN02808, PLN02808, alpha-galactosidase 0.0
PLN02692412 PLN02692, PLN02692, alpha-galactosidase 1e-173
PLN02229427 PLN02229, PLN02229, alpha-galactosidase 1e-164
PLN03231357 PLN03231, PLN03231, putative alpha-galactosidase; 2e-21
pfam02065395 pfam02065, Melibiase, Melibiase 9e-21
PLN02899 633 PLN02899, PLN02899, alpha-galactosidase 7e-18
>gnl|CDD|166449 PLN02808, PLN02808, alpha-galactosidase Back     alignment and domain information 
 Score =  595 bits (1535), Expect = 0.0
 Identities = 264/302 (87%), Positives = 281/302 (93%), Gaps = 2/302 (0%)

Query: 1   MVTSGLAALGYQYINLDDCWAELNRDSTGNFVPKASAFPAGIKALADYVHAKGLKLGIYS 60
           MV+SGLAALGY+YINLDDCWAEL RDS GN VPKAS FP+GIKALADYVH+KGLKLGIYS
Sbjct: 58  MVSSGLAALGYKYINLDDCWAELKRDSQGNLVPKASTFPSGIKALADYVHSKGLKLGIYS 117

Query: 61  DAGTQTCSKTMPGSLGHEEQDAKTFASWGVDYLKYDNCFNTGTSPKERYPIMSKALLNSG 120
           DAGT TCSKTMPGSLGHEEQDAKTFASWG+DYLKYDNC NTGTSP+ERYP MSKALLNSG
Sbjct: 118 DAGTLTCSKTMPGSLGHEEQDAKTFASWGIDYLKYDNCENTGTSPQERYPKMSKALLNSG 177

Query: 121 RPIFFSLCEWGREDPATWAPKIGNSWRTTGDIKDNWNSMTSLADQNDKWASYAGPGGYND 180
           RPIFFSLCEWG+EDPATWA  IGNSWRTTGDI+DNW+SMTS ADQND+WASYA PGG+ND
Sbjct: 178 RPIFFSLCEWGQEDPATWAGDIGNSWRTTGDIQDNWDSMTSRADQNDRWASYARPGGWND 237

Query: 181 PDMLEVGNGGMTTEEYRAHFSIWALAKAPLLIGCDIRAMDKITFNILSNKEVIAVNQDKL 240
           PDMLEVGNGGMTTEEYR+HFSIWALAKAPLLIGCDIR+MD  TF +LSNKEVIAVNQDKL
Sbjct: 238 PDMLEVGNGGMTTEEYRSHFSIWALAKAPLLIGCDIRSMDNETFELLSNKEVIAVNQDKL 297

Query: 241 GVQGKKVKKEGDLEVWAGPLSGNRVAVVLWNRGSSKATVTANWSDIGLKLNHSTVVNARD 300
           GVQGKKVKK+GDLEVWAGPLS  RVAVVLWNRGSS+AT+TA WSDIG  LN S VVNARD
Sbjct: 298 GVQGKKVKKDGDLEVWAGPLSKKRVAVVLWNRGSSRATITARWSDIG--LNSSAVVNARD 355

Query: 301 LW 302
           LW
Sbjct: 356 LW 357

Length = 386
>gnl|CDD|178295 PLN02692, PLN02692, alpha-galactosidase Back     alignment and domain information
>gnl|CDD|177874 PLN02229, PLN02229, alpha-galactosidase Back     alignment and domain information
>gnl|CDD|178770 PLN03231, PLN03231, putative alpha-galactosidase; Provisional Back     alignment and domain information
>gnl|CDD|216861 pfam02065, Melibiase, Melibiase Back     alignment and domain information
>gnl|CDD|178487 PLN02899, PLN02899, alpha-galactosidase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 303
PLN02808386 alpha-galactosidase 100.0
PLN02229427 alpha-galactosidase 100.0
PLN02692412 alpha-galactosidase 100.0
KOG2366414 consensus Alpha-D-galactosidase (melibiase) [Carbo 100.0
PLN03231357 putative alpha-galactosidase; Provisional 100.0
PLN02899 633 alpha-galactosidase 100.0
PF02065394 Melibiase: Melibiase; InterPro: IPR000111 O-Glycos 99.97
COG3345687 GalA Alpha-galactosidase [Carbohydrate transport a 99.74
PLN02219 775 probable galactinol--sucrose galactosyltransferase 99.61
PLN02355 758 probable galactinol--sucrose galactosyltransferase 99.55
PF05691 747 Raffinose_syn: Raffinose synthase or seed imbibiti 99.54
PLN02684 750 Probable galactinol--sucrose galactosyltransferase 99.52
PLN02711 777 Probable galactinol--sucrose galactosyltransferase 99.51
cd06592303 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharact 99.43
cd06593308 GH31_xylosidase_YicI YicI alpha-xylosidase is a gl 99.36
cd06589265 GH31 The enzymes of glycosyl hydrolase family 31 ( 99.12
PLN02982 865 galactinol-raffinose galactosyltransferase/ghydrol 99.12
cd06599317 GH31_glycosidase_Aec37 Glycosyl hydrolase family 3 99.01
cd06598317 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide 98.97
cd06604339 GH31_glucosidase_II_MalA Alpha-glucosidase II (alp 98.92
cd06600317 GH31_MGAM-like This family includes the following 98.88
cd06601332 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) 98.87
PF01055441 Glyco_hydro_31: Glycosyl hydrolases family 31 ; In 98.86
cd06591319 GH31_xylosidase_XylS XylS is a glycosyl hydrolase 98.82
cd06595292 GH31_xylosidase_XylS-like This family represents a 98.8
PRK10658665 putative alpha-glucosidase; Provisional 98.78
cd06602339 GH31_MGAM_SI_GAA This family includes the followin 98.78
PF10566273 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: 98.68
cd06603339 GH31_GANC_GANAB_alpha This family includes the clo 98.65
cd06594317 GH31_glucosidase_YihQ YihQ is a bacterial alpha-gl 98.58
cd06597340 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide 98.5
COG1501 772 Alpha-glucosidases, family 31 of glycosyl hydrolas 98.47
PLN02763 978 hydrolase, hydrolyzing O-glycosyl compounds 98.34
PRK10426635 alpha-glucosidase; Provisional 98.3
cd06596261 GH31_CPE1046 CPE1046 is an uncharacterized Clostri 96.31
KOG1065 805 consensus Maltase glucoamylase and related hydrola 96.27
TIGR01515 613 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 94.38
PF01120346 Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR00 94.05
smart00812384 Alpha_L_fucos Alpha-L-fucosidase. O-Glycosyl hydro 93.2
PRK10785 598 maltodextrin glucosidase; Provisional 90.48
PRK14706 639 glycogen branching enzyme; Provisional 90.47
COG0296 628 GlgB 1,4-alpha-glucan branching enzyme [Carbohydra 89.04
PRK12568 730 glycogen branching enzyme; Provisional 88.33
TIGR02104605 pulA_typeI pullulanase, type I. Pullulan is an unu 87.12
PF07302221 AroM: AroM protein; InterPro: IPR010843 This famil 86.88
PRK12313 633 glycogen branching enzyme; Provisional 86.64
PLN02960 897 alpha-amylase 85.79
PRK14705 1224 glycogen branching enzyme; Provisional 85.71
KOG3340454 consensus Alpha-L-fucosidase [Carbohydrate transpo 84.14
TIGR02402542 trehalose_TreZ malto-oligosyltrehalose trehalohydr 83.65
PF02638311 DUF187: Glycosyl hydrolase like GH101; InterPro: I 82.86
PRK05402 726 glycogen branching enzyme; Provisional 82.58
>PLN02808 alpha-galactosidase Back     alignment and domain information 
Probab=100.00  E-value=2.2e-95  Score=683.68  Aligned_cols=301  Identities=88%  Similarity=1.437  Sum_probs=291.2

Q ss_pred             CccccchhcCccEEEEcccccCCCCCCCCCcccCCCCCCCcHHHHHHHHHHcCCEEEEEecCCCcccCCCCCCccchHHH
Q 038817            1 MVTSGLAALGYQYINLDDCWAELNRDSTGNFVPKASAFPAGIKALADYVHAKGLKLGIYSDAGTQTCSKTMPGSLGHEEQ   80 (303)
Q Consensus         1 ~~~~gl~~~Gy~~v~iDdgW~~~~~d~~G~~~~~~~~FP~G~~~l~~~ih~~Glk~Giy~~pg~~~c~~~~pg~~~~~~~   80 (303)
                      |+++||+++||+||+|||||+...||+.|+|+||++|||+||++|++|||++|||||||+++|..+|.+.+|||++|+++
T Consensus        58 mv~~Gl~~~Gy~yv~iDd~W~~~~rd~~G~~~~d~~rFP~G~~~lad~iH~~GlkfGiy~~~G~~tC~~~~pGs~~~e~~  137 (386)
T PLN02808         58 MVSSGLAALGYKYINLDDCWAELKRDSQGNLVPKASTFPSGIKALADYVHSKGLKLGIYSDAGTLTCSKTMPGSLGHEEQ  137 (386)
T ss_pred             HHHcchHHhCCEEEEEcCCcCCCCcCCCCCEeeChhhcCccHHHHHHHHHHCCCceEEEecCCccccCCCCCcchHHHHH
Confidence            67899999999999999999998899999999999999999999999999999999999999999998878999999999


Q ss_pred             HHHHHHHcCccEEEeecCCCCCCCccchhHHHHHHHHhcCCCeEEEeccCCCCCcCcccccccCeEeecCCCCCchhhHH
Q 038817           81 DAKTFASWGVDYLKYDNCFNTGTSPKERYPIMSKALLNSGRPIFFSLCEWGREDPATWAPKIGNSWRTTGDIKDNWNSMT  160 (303)
Q Consensus        81 ~~~~~~~wGvdylK~D~~~~~~~~~~~~y~~~~~al~~~g~~i~~~~c~~g~~~~~~~~~~~~~~~Ris~D~~~~w~~~~  160 (303)
                      |+++|++|||||||+|+|+.......++|..|++||+++||||+||+|+||...|..|...++|+||++.|+++.|.++.
T Consensus       138 DA~~fA~WGvDylK~D~C~~~~~~~~~~y~~m~~AL~~tGRpi~~slc~wg~~~p~~w~~~~~n~WR~s~Di~d~W~~v~  217 (386)
T PLN02808        138 DAKTFASWGIDYLKYDNCENTGTSPQERYPKMSKALLNSGRPIFFSLCEWGQEDPATWAGDIGNSWRTTGDIQDNWDSMT  217 (386)
T ss_pred             HHHHHHHhCCCEEeecCcCCCCccHHHHHHHHHHHHHHhCCCeEEEecCCCCCCHHHHHHhhcCcccccCCcccchhhHH
Confidence            99999999999999999988766778899999999999999999999999988888999899999999999999999999


Q ss_pred             HHHHhhcccccccCCCCcCCCcceecCCCCCChHHHHHHHHHHHHhcCCeeeccCCCCCCHHHHHhhhchHHHHhhcccC
Q 038817          161 SLADQNDKWASYAGPGGYNDPDMLEVGNGGMTTEEYRAHFSIWALAKAPLLIGCDIRAMDKITFNILSNKEVIAVNQDKL  240 (303)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~nDpD~l~vg~~~lt~~E~r~~~~~wa~~~spL~~g~dl~~l~~~~~~~l~N~~~iai~qd~l  240 (303)
                      ++++.+..++++++||+|||||||+||+++||.+|+||||+||||++||||+|+||++++++.+++|+|+|+||||||++
T Consensus       218 ~~~~~~~~~~~~agPG~wnDpDML~vGn~glt~~E~rthfsLWam~~SPLiiG~DL~~~~~~~l~iLtNkevIAINQD~l  297 (386)
T PLN02808        218 SRADQNDRWASYARPGGWNDPDMLEVGNGGMTTEEYRSHFSIWALAKAPLLIGCDIRSMDNETFELLSNKEVIAVNQDKL  297 (386)
T ss_pred             HHHHhhhhhHhhcCCCCCCCCCeeeECCCCCCHHHHHHHHHHHHHHhCcceecCCcCcCCHHHHHHhcCHHHHhhcCCcc
Confidence            99999889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccEEeeecCCeeEEEEEcCCCCEEEEEEeCCCCceEEEEEcccccccccCCCeeEEEecCC
Q 038817          241 GVQGKKVKKEGDLEVWAGPLSGNRVAVVLWNRGSSKATVTANWSDIGLKLNHSTVVNARDLWQ  303 (303)
Q Consensus       241 g~~~~~v~~~~~~~vw~~~l~~g~~~va~fN~~~~~~~~~~~~~~lGl~~~~~~~~~v~DlW~  303 (303)
                      |+++++|...++.+||.+++++|+++|+|||+++++++++++|++|||  .....++|||||+
T Consensus       298 G~~~~~v~~~~~~~vW~k~L~~g~~aVal~N~~~~~~~~~~~~~~lgl--~~~~~~~vrDlWs  358 (386)
T PLN02808        298 GVQGKKVKKDGDLEVWAGPLSKKRVAVVLWNRGSSRATITARWSDIGL--NSSAVVNARDLWA  358 (386)
T ss_pred             ccCcEEEEecCCeEEEEEECCCCCEEEEEEECCCCCEEEEEEHHHhCC--CCCCceEEEECCC
Confidence            999999998889999999999999999999999999999999999999  6666899999996

>PLN02229 alpha-galactosidase Back     alignment and domain information
>PLN02692 alpha-galactosidase Back     alignment and domain information
>KOG2366 consensus Alpha-D-galactosidase (melibiase) [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN03231 putative alpha-galactosidase; Provisional Back     alignment and domain information
>PLN02899 alpha-galactosidase Back     alignment and domain information
>PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG3345 GalA Alpha-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02219 probable galactinol--sucrose galactosyltransferase 2 Back     alignment and domain information
>PLN02355 probable galactinol--sucrose galactosyltransferase 1 Back     alignment and domain information
>PF05691 Raffinose_syn: Raffinose synthase or seed imbibition protein Sip1; InterPro: IPR008811 This family consists of several raffinose synthase proteins, also known as seed imbibition (Sip1) proteins Back     alignment and domain information
>PLN02684 Probable galactinol--sucrose galactosyltransferase Back     alignment and domain information
>PLN02711 Probable galactinol--sucrose galactosyltransferase Back     alignment and domain information
>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase Back     alignment and domain information
>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose Back     alignment and domain information
>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase Back     alignment and domain information
>PLN02982 galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds Back     alignment and domain information
>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37 Back     alignment and domain information
>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY Back     alignment and domain information
>cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities Back     alignment and domain information
>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II Back     alignment and domain information
>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end Back     alignment and domain information
>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate Back     alignment and domain information
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus Back     alignment and domain information
>PRK10658 putative alpha-glucosidase; Provisional Back     alignment and domain information
>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase Back     alignment and domain information
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB) Back     alignment and domain information
>cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride Back     alignment and domain information
>cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ Back     alignment and domain information
>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02763 hydrolase, hydrolyzing O-glycosyl compounds Back     alignment and domain information
>PRK10426 alpha-glucosidase; Provisional Back     alignment and domain information
>cd06596 GH31_CPE1046 CPE1046 is an uncharacterized Clostridium perfringens protein with a glycosyl hydrolase family 31 (GH31) domain Back     alignment and domain information
>KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase Back     alignment and domain information
>PF01120 Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR000933 O-Glycosyl hydrolases 3 Back     alignment and domain information
>smart00812 Alpha_L_fucos Alpha-L-fucosidase Back     alignment and domain information
>PRK10785 maltodextrin glucosidase; Provisional Back     alignment and domain information
>PRK14706 glycogen branching enzyme; Provisional Back     alignment and domain information
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK12568 glycogen branching enzyme; Provisional Back     alignment and domain information
>TIGR02104 pulA_typeI pullulanase, type I Back     alignment and domain information
>PF07302 AroM: AroM protein; InterPro: IPR010843 This family consists of several bacterial and archaeal AroM proteins Back     alignment and domain information
>PRK12313 glycogen branching enzyme; Provisional Back     alignment and domain information
>PLN02960 alpha-amylase Back     alignment and domain information
>PRK14705 glycogen branching enzyme; Provisional Back     alignment and domain information
>KOG3340 consensus Alpha-L-fucosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase Back     alignment and domain information
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function Back     alignment and domain information
>PRK05402 glycogen branching enzyme; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query303
1uas_A362 Crystal Structure Of Rice Alpha-Galactosidase Lengt 1e-133
3a5v_A397 Crystal Structure Of Alpha-Galactosidase I From Mor 1e-71
1ktb_A405 The Structure Of Alpha-N-Acetylgalactosaminidase Le 5e-66
1r46_A398 Structure Of Human Alpha-galactosidase Length = 398 5e-58
3a21_A 614 Crystal Structure Of Streptomyces Avermitilis Beta- 6e-58
3lrk_A479 Structure Of Alfa-Galactosidase (Mel1) From Sacchar 9e-58
1szn_A417 The Structure Of Alpha-Galactosidase Length = 417 2e-57
3lx9_A404 Interconversion Of Human Lysosomal Enzyme Specifici 2e-57
3h53_A400 Crystal Structure Of Human Alpha-N-Acetylgalactosam 3e-57
3hg3_A404 Human Alpha-Galactosidase Catalytic Mechanism 2. Su 4e-57
3lrm_A479 Structure Of Alfa-Galactosidase From Saccharomyces 7e-57
3cc1_A433 Crystal Structure Of A Putative Alpha-N-Acetylgalac 5e-19
>pdb|1UAS|A Chain A, Crystal Structure Of Rice Alpha-Galactosidase Length = 362 Back     alignment and structure 
Iteration: 1

 Score =  470 bits (1209), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 224/302 (74%), Positives = 253/302 (83%), Gaps = 2/302 (0%)
Query: 1   MVTSGLAALGYQYINLDDCWAELNRDSTGNFVPKASAFPAGIKALADYVHAKGLKLGIYS 60
           +V +GLA LGYQY+N+DDCWAE +RDS GNFVP    FP+GIKALADYVHAKGLKLGIYS
Sbjct: 35  LVNTGLAKLGYQYVNIDDCWAEYSRDSQGNFVPNRQTFPSGIKALADYVHAKGLKLGIYS 94
Query: 61  DAGTQTCSKTMPGSLGHEEQDAKTFASWGVDYLKYDNCFNTGTSPKERYPIMSKALLNSG 120
           DAG+QTCS  MPGSL HEEQD KTFASWGVDYLKYDNC + G S  ERY  MS A+   G
Sbjct: 95  DAGSQTCSNKMPGSLDHEEQDVKTFASWGVDYLKYDNCNDAGRSVMERYTRMSNAMKTYG 154
Query: 121 RPIFFSLCEWGREDPATWAPKIGNSWRTTGDIKDNWNSMTSLADQNDKWASYAGPGGYND 180
           + IFFSLCEWG+E+PATWA ++GNSWRTTGDI DNW SMTS AD+ND+WA+YAGPGG+ND
Sbjct: 155 KNIFFSLCEWGKENPATWAGRMGNSWRTTGDIADNWGSMTSRADENDQWAAYAGPGGWND 214
Query: 181 PDMLEVGNGGMTTEEYRAHFSIWALAKAPLLIGCDIRAMDKITFNILSNKEVIAVNQDKL 240
           PDMLEVGNGGM+  EYR+HFSIWALAKAPLLIGCD+R+M + T NILSN EVIAVNQD L
Sbjct: 215 PDMLEVGNGGMSEAEYRSHFSIWALAKAPLLIGCDVRSMSQQTKNILSNSEVIAVNQDSL 274
Query: 241 GVQGKKVKKEGDLEVWAGPLSGNRVAVVLWNRGSSKATVTANWSDIGLKLNHSTVVNARD 300
           GVQGKKV+ +  LEVWAGPLS NR AVVLWNR S +AT+TA+WS+IGL    S  V ARD
Sbjct: 275 GVQGKKVQSDNGLEVWAGPLSNNRKAVVLWNRQSYQATITAHWSNIGLA--GSVAVTARD 332
Query: 301 LW 302
           LW
Sbjct: 333 LW 334
>pdb|3A5V|A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea Length = 397 Back     alignment and structure
>pdb|1KTB|A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase Length = 405 Back     alignment and structure
>pdb|1R46|A Chain A, Structure Of Human Alpha-galactosidase Length = 398 Back     alignment and structure
>pdb|3A21|A Chain A, Crystal Structure Of Streptomyces Avermitilis Beta-L- Arabinopyranosidase Length = 614 Back     alignment and structure
>pdb|3LRK|A Chain A, Structure Of Alfa-Galactosidase (Mel1) From Saccharomyces Cerevisiae Length = 479 Back     alignment and structure
>pdb|1SZN|A Chain A, The Structure Of Alpha-Galactosidase Length = 417 Back     alignment and structure
>pdb|3LX9|A Chain A, Interconversion Of Human Lysosomal Enzyme Specificities Length = 404 Back     alignment and structure
>pdb|3H53|A Chain A, Crystal Structure Of Human Alpha-N-Acetylgalactosaminidase Length = 400 Back     alignment and structure
>pdb|3HG3|A Chain A, Human Alpha-Galactosidase Catalytic Mechanism 2. Substrate Bound Length = 404 Back     alignment and structure
>pdb|3LRM|A Chain A, Structure Of Alfa-Galactosidase From Saccharomyces Cerevisiae With Raffinose Length = 479 Back     alignment and structure
>pdb|3CC1|A Chain A, Crystal Structure Of A Putative Alpha-N-Acetylgalactosaminidase (Bh1870) From Bacillus Halodurans C-125 At 2.00 A Resolution Length = 433 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query303
3a21_A 614 Putative secreted alpha-galactosidase; beta-alpha- 1e-126
1uas_A362 Alpha-galactosidase; TIM-barrel, beta-alpha-barrel 1e-118
3a5v_A397 Alpha-galactosidase; beta/alpha barrel, N-glycosyl 1e-111
3lrk_A479 Alpha-galactosidase 1; tetramer, GH27, glycoprotei 1e-111
1szn_A417 Alpha-galactosidase; (beta/alpha)8 barrel,TWO doma 1e-110
1ktb_A405 Alpha-N-acetylgalactosaminidase; glycoprotein, (be 1e-107
3hg3_A404 Alpha-galactosidase A; glycoprotein, carbohydrate- 1e-106
3cc1_A433 BH1870 protein, putative alpha-N-acetylgalactosami 3e-96
2xn2_A732 Alpha-galactosidase; hydrolase, glycosidase; HET: 5e-16
1zy9_A564 Alpha-galactosidase; TM1192, struc genomics, joint 2e-14
3mi6_A745 Alpha-galactosidase; NESG, structural genomics, PS 4e-11
2yfo_A720 Alpha-galactosidase-sucrose kinase agask; hydrolas 1e-09
3a24_A641 Alpha-galactosidase; glycoside hydrolase family 97 3e-05
>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A* Length = 614 Back     alignment and structure
 Score =  373 bits (959), Expect = e-126
 Identities = 127/309 (41%), Positives = 168/309 (54%), Gaps = 21/309 (6%)

Query: 1   MVTSGLAALGYQYINLDDCWAELNRDSTGNFVPKASAFPAGIKALADYVHAKGLKLGIYS 60
            V +GL A GY YIN+D+ W +  RDS GN     + +P G+ A+  Y+H+KGLK GIY+
Sbjct: 38  FVAAGLPAAGYTYINIDEGWWQGTRDSAGNITVDTAEWPGGMSAITAYIHSKGLKAGIYT 97

Query: 61  DAGTQTCS---------KTMPGSLGHEEQDAKTFASWGVDYLKYDNCFN--TGTSPKERY 109
           DAG   C              GS GH +QD   F++WG D++K D C     G      Y
Sbjct: 98  DAGKDGCGYYYPTGRPAAPGSGSEGHYDQDMLQFSTWGFDFVKVDWCGGDAEGLDAATTY 157

Query: 110 PIMS----KALLNSGRPIFFSLCEWGREDPATWAPKIGNSWRTTGDIK--DNWNSMTSLA 163
             +S    +A   +GRP+  S+C WG ++P  WA      WRT+ DI    N  SMTSL 
Sbjct: 158 KSISDAVGRAAATTGRPLTLSICNWGYQNPWNWAAGQAPLWRTSTDIIYYGNQPSMTSLL 217

Query: 164 DQNDK--WASYAGPGGYNDPDMLEVGNGGMTTEEYRAHFSIWALAKAPLLIGCDIRAMDK 221
              D+    +    G YNDPDML VG  G T  + R H ++WA++ APLL G D+  M  
Sbjct: 218 SNFDQTLHPTAQHTGYYNDPDMLMVGMDGFTAAQNRTHMNLWAISGAPLLAGNDLTTMTS 277

Query: 222 ITFNILSNKEVIAVNQDKLGVQGKKVKKEGD-LEVWAGPLSGN-RVAVVLWNRGSSKATV 279
            T  IL N EVIAV+QD  G+QG KV ++   L+ +   LSG    AVVL NR S+   +
Sbjct: 278 ETAGILKNPEVIAVDQDSRGLQGVKVAEDTTGLQAYGKVLSGTGNRAVVLLNRTSAAHDI 337

Query: 280 TANWSDIGL 288
           T  WSD+GL
Sbjct: 338 TVRWSDLGL 346
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1 Length = 362 Back     alignment and structure
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea} Length = 397 Back     alignment and structure
>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A* Length = 479 Back     alignment and structure
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A* Length = 417 Back     alignment and structure
>1ktb_A Alpha-N-acetylgalactosaminidase; glycoprotein, (beta/alpha)8 barrel, hydrolase; HET: NAG; 1.90A {Gallus gallus} SCOP: b.71.1.1 c.1.8.1 PDB: 1ktc_A* 3h55_A* 3h54_A* 3h53_A* 3igu_A* Length = 405 Back     alignment and structure
>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A* Length = 404 Back     alignment and structure
>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125} Length = 433 Back     alignment and structure
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A* Length = 732 Back     alignment and structure
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 Length = 564 Back     alignment and structure
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} Length = 745 Back     alignment and structure
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* Length = 720 Back     alignment and structure
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron} Length = 641 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query303
3lrk_A479 Alpha-galactosidase 1; tetramer, GH27, glycoprotei 100.0
3hg3_A404 Alpha-galactosidase A; glycoprotein, carbohydrate- 100.0
3a5v_A397 Alpha-galactosidase; beta/alpha barrel, N-glycosyl 100.0
1uas_A362 Alpha-galactosidase; TIM-barrel, beta-alpha-barrel 100.0
1szn_A417 Alpha-galactosidase; (beta/alpha)8 barrel,TWO doma 100.0
4do4_A400 Alpha-N-acetylgalactosaminidase; pharmacological c 100.0
3cc1_A433 BH1870 protein, putative alpha-N-acetylgalactosami 100.0
3a21_A 614 Putative secreted alpha-galactosidase; beta-alpha- 100.0
1zy9_A564 Alpha-galactosidase; TM1192, struc genomics, joint 100.0
4fnq_A729 Alpha-galactosidase AGAB; glycoside hydrolase, hyd 100.0
2xn2_A732 Alpha-galactosidase; hydrolase, glycosidase; HET: 100.0
2yfo_A720 Alpha-galactosidase-sucrose kinase agask; hydrolas 99.97
3mi6_A745 Alpha-galactosidase; NESG, structural genomics, PS 99.94
3a24_A641 Alpha-galactosidase; glycoside hydrolase family 97 99.69
2f2h_A 773 Putative family 31 glucosidase YICI; BETA8alpha8 b 99.22
2g3m_A 693 Maltase, alpha-glucosidase; hydrolase, glycoside h 99.21
4ba0_A 817 Alpha-glucosidase, putative, ADG31B; hydrolase; HE 99.1
2d73_A738 Alpha-glucosidase SUSB; glycoside hydrolase family 98.93
3lpp_A 898 Sucrase-isomaltase; glycoside hydrolase family 31, 98.87
3nsx_A 666 Alpha-glucosidase; structural genomics, PSI-2, pro 98.85
2xvl_A 1020 Alpha-xylosidase, putative, XYL31A; hydrolase, gly 98.83
3l4y_A 875 Maltase-glucoamylase, intestinal; glycoside hydrol 98.81
3top_A 908 Maltase-glucoamylase, intestinal; membrane, hydrol 97.96
3zss_A695 Putative glucanohydrolase PEP1A; alpha-glucan bios 97.91
2x2h_A 1027 Alpha-1,4-glucan lyase isozyme 1; anhydrofructose 97.3
3ues_A478 Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydr 95.42
1ji1_A637 Alpha-amylase I; beta/alpha barrel, hydrolase; 1.6 94.69
3eyp_A469 Putative alpha-L-fucosidase; structural genomics, 92.26
1ea9_C583 Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A 91.88
3m07_A 618 Putative alpha amylase; IDP00968, csgid, structura 91.74
2bhu_A 602 Maltooligosyltrehalose trehalohydrolase; alpha-amy 90.18
3edf_A601 FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c 89.45
2wvv_A450 Alpha-L-fucosidase; alpha-L-fucose, hydrolase, gly 89.28
1wzl_A585 Alpha-amylase II; pullulan, GH-13, alpha-amylase f 89.04
4aie_A 549 Glucan 1,6-alpha-glucosidase; hydrolase, glycoside 88.77
3gza_A443 Putative alpha-L-fucosidase; NP_812709.1, structur 88.7
1m7x_A 617 1,4-alpha-glucan branching enzyme; alpha/beta barr 87.67
3dhu_A449 Alpha-amylase; structural genomics, hydrolase, gly 87.55
2dh2_A424 4F2 cell-surface antigen heavy chain; TIM-barrel, 87.39
1j0h_A588 Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 87.34
2zxd_A455 Alpha-L-fucosidase, putative; TIM barrel, hydrolas 87.15
3vgf_A558 Malto-oligosyltrehalose trehalohydrolase; alpha/be 86.68
3k1d_A 722 1,4-alpha-glucan-branching enzyme; mycobacterium t 86.3
2e8y_A 718 AMYX protein, pullulanase; multiple domain, beta-a 85.79
3faw_A 877 Reticulocyte binding protein; TIM barrel, beta bar 84.13
4axn_A328 Chitinase C1; hydrolase; 1.68A {Serratia marcescen 82.62
>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A* Back     alignment and structure
Probab=100.00  E-value=1e-89  Score=659.43  Aligned_cols=299  Identities=41%  Similarity=0.831  Sum_probs=281.3

Q ss_pred             CccccchhcCccEEEEcccccCCCCCCCCCcccCCCCCCCcHHHHHHHHHHcCCEEEEEecCCCcccCCCCCCccchHHH
Q 038817            1 MVTSGLAALGYQYINLDDCWAELNRDSTGNFVPKASAFPAGIKALADYVHAKGLKLGIYSDAGTQTCSKTMPGSLGHEEQ   80 (303)
Q Consensus         1 ~~~~gl~~~Gy~~v~iDdgW~~~~~d~~G~~~~~~~~FP~G~~~l~~~ih~~Glk~Giy~~pg~~~c~~~~pg~~~~~~~   80 (303)
                      |++.||+++||+||+||||||. .||.+|+|++|++|||+||++|++|||++|||||||++||..+|.+ +||+++|++.
T Consensus        56 ~~~~Gl~~~GyeyvvIDDGW~~-~rd~~G~~~~d~~kFP~Glk~Lad~ih~~GlKfGIw~~pG~~tC~~-~pGsl~~~~~  133 (479)
T 3lrk_A           56 ISDLGLKDMGYKYIILDDCWSS-GRDSDGFLVADEQKFPNGMGHVADHLHNNSFLFGMYSSAGEYTCAG-YPGSLGREEE  133 (479)
T ss_dssp             HHHTTCGGGTCCEEECCSSCEE-EECTTSCEEECTTTCTTCHHHHHHHHHHTTCEEEEEEESSSBCTTS-SBCCTTCHHH
T ss_pred             HHhcCccccCceEEEECCcccc-ccCCCCCEecChhhcCCCHHHHHHHHHHCCCeeEEEecCccccccC-CCchhHHHHH
Confidence            3567999999999999999998 5888999999999999999999999999999999999999999987 9999999999


Q ss_pred             HHHHHHHcCccEEEeecCCCCCCC-----ccchhHHHHHHHHhcCCCeEEEeccCCCCCcCcccccccCeEeecCCCCCc
Q 038817           81 DAKTFASWGVDYLKYDNCFNTGTS-----PKERYPIMSKALLNSGRPIFFSLCEWGREDPATWAPKIGNSWRTTGDIKDN  155 (303)
Q Consensus        81 ~~~~~~~wGvdylK~D~~~~~~~~-----~~~~y~~~~~al~~~g~~i~~~~c~~g~~~~~~~~~~~~~~~Ris~D~~~~  155 (303)
                      ++++|++|||||||+|+|+.....     ..++|..|++||+++||||+||+|+||...|..|..+++|+|||++||.+.
T Consensus       134 da~~fa~WGVDylK~D~c~~~~~~~~~~~~~~~y~~m~~AL~~tGRpI~~Slc~Wg~~~~~~w~~~~~n~WR~s~DI~d~  213 (479)
T 3lrk_A          134 DAQFFANNRVDYLKYDNCYNKGQFGTPEISYHRYKAMSDALNKTGRPVFYSLCNWGQDLTFYWGSGIANSWRMSGDVTAE  213 (479)
T ss_dssp             HHHHHHHTTCCEEEEECTTCTTCCSSHHHHHHHHHHHHHHHHHHCSCCEEEECSTTTTTHHHHSTTTCSEEECSSCBCSC
T ss_pred             HHHHHHHhCCcEEEEccCCCccccCCcchhHHHHHHHHHHHHHhCCCeEEEeccCccCchhhhhhhhCCeeeecCCcccc
Confidence            999999999999999999875432     257899999999999999999999999888888988999999999999999


Q ss_pred             hh----------------------hHHHHHHhhcccccccCCCCcCCCcceecCCCCCChHHHHHHHHHHHHhcCCeeec
Q 038817          156 WN----------------------SMTSLADQNDKWASYAGPGGYNDPDMLEVGNGGMTTEEYRAHFSIWALAKAPLLIG  213 (303)
Q Consensus       156 w~----------------------~~~~~~~~~~~~~~~~~~~~~nDpD~l~vg~~~lt~~E~r~~~~~wa~~~spL~~g  213 (303)
                      |+                      ++.++++.+..|+++++||+|||||||+||+++||.+|+||||++|||++||||+|
T Consensus       214 W~~~~~~~~~~~~~~~~~~~g~~~sv~~i~~~~~~~~~~agpG~wNDpDML~vGn~glT~~E~rthfslWai~~SPLiiG  293 (479)
T 3lrk_A          214 FTRPDSRCPCDGDEYDCKYAGFHCSIMNILNKAAPMGQNAGVGGWNDLDNLEVGVGNLTDDEEKAHFSMWAMVKSPLIIG  293 (479)
T ss_dssp             SSCCCTTSCSCTTCSSCSCCCSCBCHHHHHHHHGGGGGGCBTTBEEECCSBCTTSTTCCHHHHHHHHHHHHHTTCCEEEC
T ss_pred             ccccccccccccccccccccccchhHHHHHHHhhhhhhccCCCCCCCCCeEeeCCCCCCHHHHHHHHHHHHHHcCceEec
Confidence            97                      68888998889999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCHHHHHhhhchHHHHhhcccCCCccEEeee----------cCCeeEEEEEcCCCCEEEEEEeCCCCceEEEEEc
Q 038817          214 CDIRAMDKITFNILSNKEVIAVNQDKLGVQGKKVKK----------EGDLEVWAGPLSGNRVAVVLWNRGSSKATVTANW  283 (303)
Q Consensus       214 ~dl~~l~~~~~~~l~N~~~iai~qd~lg~~~~~v~~----------~~~~~vw~~~l~~g~~~va~fN~~~~~~~~~~~~  283 (303)
                      +||++++++.+++|+|+||||||||++|+|++++.+          .++.+||.+++++|+++|+|||+++++++++++|
T Consensus       294 ~DL~~~~~~tl~iLtN~evIAINQD~lG~q~~~v~~~~~~~~d~~~~~~~~VW~~~l~~G~~aValfN~~~~~~~vtv~l  373 (479)
T 3lrk_A          294 ANVNNLKASSYSIYSQASVIAINQDSNGIPATRVWRYYVSDTDEYGQGEIQMWSGPLDNGDQVVALLNGGSVSRPMNTTL  373 (479)
T ss_dssp             SCGGGCCHHHHHHHTCHHHHHHHTCTTCCCCEEEEEEECSCCCTTSCCEEEEEEEECTTSCEEEEEEECSSSCEEEEECH
T ss_pred             CCcccCCHHHHHHhcCHHHHHHhccccCCceEEEeeccCccccccCCCCcEEEEEECCCCCEEEEEEECCCCCEEEEEEH
Confidence            999999999999999999999999999999999975          2467999999999999999999999999999999


Q ss_pred             ccccccccC-------CCeeEEEecCC
Q 038817          284 SDIGLKLNH-------STVVNARDLWQ  303 (303)
Q Consensus       284 ~~lGl~~~~-------~~~~~v~DlW~  303 (303)
                      ++|||  .+       +..|+|||||+
T Consensus       374 ~dlGL--~~~~~~~~~~~~~~VrDLW~  398 (479)
T 3lrk_A          374 EEIFF--DSNLGSKKLTSTWDIYDLWA  398 (479)
T ss_dssp             HHHTT--TCCTTCHHHHSCEEEEETTT
T ss_pred             HHhCC--CccccccccCCceEEEeccC
Confidence            99999  65       46899999996
>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A* Back     alignment and structure
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea} Back     alignment and structure
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A* Back     alignment and structure
>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A* Back     alignment and structure
>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125} Back     alignment and structure
>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A* Back     alignment and structure
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 Back     alignment and structure
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A* Back     alignment and structure
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A* Back     alignment and structure
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* Back     alignment and structure
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} Back     alignment and structure
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A* Back     alignment and structure
>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A* Back     alignment and structure
>4ba0_A Alpha-glucosidase, putative, ADG31B; hydrolase; HET: 5GF PGE ARG; 1.85A {Cellvibrio japonicus} PDB: 4b9z_A* 4b9y_A* Back     alignment and structure
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A* Back     alignment and structure
>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A* Back     alignment and structure
>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A* Back     alignment and structure
>2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A* Back     alignment and structure
>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A* Back     alignment and structure
>3top_A Maltase-glucoamylase, intestinal; membrane, hydrolase-hydrolase inhibitor complex; HET: ACR; 2.88A {Homo sapiens} PDB: 3ton_A* Back     alignment and structure
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* Back     alignment and structure
>2x2h_A Alpha-1,4-glucan lyase isozyme 1; anhydrofructose pathway, glycoside hydrolase family 3 starch binding domain; 2.06A {Gracilariopsis lemaneiformis} PDB: 2x2i_A* 2x2j_A* Back     alignment and structure
>3ues_A Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydrolase inhibitor complex; HET: DFU; 1.60A {Bifidobacterium longum subsp} PDB: 3mo4_A* 3uet_A* Back     alignment and structure
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A Back     alignment and structure
>3eyp_A Putative alpha-L-fucosidase; structural genomics, hydrolase, lipoprotein, PSI-2, protein initiative; 1.90A {Bacteroides thetaiotaomicron} Back     alignment and structure
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Back     alignment and structure
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp} Back     alignment and structure
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A* Back     alignment and structure
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A Back     alignment and structure
>2wvv_A Alpha-L-fucosidase; alpha-L-fucose, hydrolase, glycoside hydrolase family 29; 1.73A {Bacteroides thetaiotaomicron} PDB: 2xii_A* 2xib_A* 2wvv_B 2wvt_A* 2wvu_A* 2wvs_A* Back     alignment and structure
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A Back     alignment and structure
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm} Back     alignment and structure
>3gza_A Putative alpha-L-fucosidase; NP_812709.1, structural genomic center for structural genomics, JCSG; HET: MSE EPE; 1.60A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A* Back     alignment and structure
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} Back     alignment and structure
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A Back     alignment and structure
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* Back     alignment and structure
>2zxd_A Alpha-L-fucosidase, putative; TIM barrel, hydrolase; HET: ZXD; 2.15A {Thermotoga maritima} PDB: 2zwy_A* 2zx5_A* 2zx6_A* 2zx7_A* 2zwz_A* 2zx9_A* 2zxa_A* 2zxb_A* 2zx8_A* 1hl9_A* 1hl8_A* 1odu_A* 2wsp_A* Back     alignment and structure
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A Back     alignment and structure
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} Back     alignment and structure
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A* Back     alignment and structure
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A* Back     alignment and structure
>4axn_A Chitinase C1; hydrolase; 1.68A {Serratia marcescens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 303
d1uasa2273 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [ 6e-85
d1ktba2293 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallu 2e-80
d1r46a2292 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) 7e-79
d1szna2314 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [T 2e-70
d1zy9a2348 c.1.8.13 (A:178-525) Alpha-galactosidase GalA cata 9e-50
d1uasa189 b.71.1.1 (A:274-362) Melibiase {Rice (Oryza sativa 2e-21
d1r46a198 b.71.1.1 (A:324-421) Melibiase {Human (Homo sapien 6e-16
d1ktba195 b.71.1.1 (A:294-388) Melibiase {Chicken (Gallus ga 2e-15
d1szna1103 b.71.1.1 (A:315-417) Melibiase {Trichoderma reesei 2e-13
>d1uasa2 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} Length = 273 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Melibiase
species: Rice (Oryza sativa) [TaxId: 4530]

 Score =  254 bits (649), Expect = 6e-85
 Identities = 181/238 (76%), Positives = 204/238 (85%)

Query: 1   MVTSGLAALGYQYINLDDCWAELNRDSTGNFVPKASAFPAGIKALADYVHAKGLKLGIYS 60
           +V +GLA LGYQY+N+DDCWAE +RDS GNFVP    FP+GIKALADYVHAKGLKLGIYS
Sbjct: 35  LVNTGLAKLGYQYVNIDDCWAEYSRDSQGNFVPNRQTFPSGIKALADYVHAKGLKLGIYS 94

Query: 61  DAGTQTCSKTMPGSLGHEEQDAKTFASWGVDYLKYDNCFNTGTSPKERYPIMSKALLNSG 120
           DAG+QTCS  MPGSL HEEQD KTFASWGVDYLKYDNC + G S  ERY  MS A+   G
Sbjct: 95  DAGSQTCSNKMPGSLDHEEQDVKTFASWGVDYLKYDNCNDAGRSVMERYTRMSNAMKTYG 154

Query: 121 RPIFFSLCEWGREDPATWAPKIGNSWRTTGDIKDNWNSMTSLADQNDKWASYAGPGGYND 180
           + IFFSLCEWG+E+PATWA ++GNSWRTTGDI DNW SMTS AD+ND+WA+YAGPGG+ND
Sbjct: 155 KNIFFSLCEWGKENPATWAGRMGNSWRTTGDIADNWGSMTSRADENDQWAAYAGPGGWND 214

Query: 181 PDMLEVGNGGMTTEEYRAHFSIWALAKAPLLIGCDIRAMDKITFNILSNKEVIAVNQD 238
           PDMLEVGNGGM+  EYR+HFSIWALAKAPLLIGCD+R+M + T NILSN EVIAVNQD
Sbjct: 215 PDMLEVGNGGMSEAEYRSHFSIWALAKAPLLIGCDVRSMSQQTKNILSNSEVIAVNQD 272
>d1ktba2 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} Length = 293 Back     information, alignment and structure
>d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]} Length = 292 Back     information, alignment and structure
>d1szna2 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [TaxId: 51453]} Length = 314 Back     information, alignment and structure
>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} Length = 348 Back     information, alignment and structure
>d1uasa1 b.71.1.1 (A:274-362) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} Length = 89 Back     information, alignment and structure
>d1r46a1 b.71.1.1 (A:324-421) Melibiase {Human (Homo sapiens) [TaxId: 9606]} Length = 98 Back     information, alignment and structure
>d1ktba1 b.71.1.1 (A:294-388) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} Length = 95 Back     information, alignment and structure
>d1szna1 b.71.1.1 (A:315-417) Melibiase {Trichoderma reesei [TaxId: 51453]} Length = 103 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query303
d1uasa2273 Melibiase {Rice (Oryza sativa) [TaxId: 4530]} 100.0
d1r46a2292 Melibiase {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1ktba2293 Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} 100.0
d1szna2314 Melibiase {Trichoderma reesei [TaxId: 51453]} 100.0
d1zy9a2348 Alpha-galactosidase GalA catalytic domain {Thermot 100.0
d1uasa189 Melibiase {Rice (Oryza sativa) [TaxId: 4530]} 99.58
d1ktba195 Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} 99.41
d1r46a198 Melibiase {Human (Homo sapiens) [TaxId: 9606]} 99.35
d2f2ha4338 Putative glucosidase YicI, domain 2 {Escherichia c 99.23
d1szna1103 Melibiase {Trichoderma reesei [TaxId: 51453]} 99.21
d1ji1a283 Maltogenic amylase {Thermoactinomyces vulgaris, TV 94.91
d2bhua3420 Glycosyltrehalose trehalohydrolase, central domain 94.77
d1hl9a2350 Putative alpha-L-fucosidase, catalytic domain {The 94.18
d1j0ha3382 Neopullulanase, central domain {Bacillus stearothe 93.96
d1wzaa2409 Bacterial alpha-amylase {Halothermothrix orenii [T 93.62
d1ht6a2347 Plant alpha-amylase {Barley (Hordeum vulgare), AMY 92.11
d1eh9a3400 Glycosyltrehalose trehalohydrolase, central domain 92.1
d1ea9c3382 Maltogenic amylase, central domain {Bacillus sp., 91.82
d1wzla3382 Maltogenic amylase, central domain {Thermoactinomy 91.57
d1j0ha283 Neopullulanase {Bacillus stearothermophilus [TaxId 91.11
d1h3ga3422 Cyclomaltodextrinase, central domain {Flavobacteri 89.79
d3bmva4406 Cyclodextrin glycosyltransferase {Thermoanaerobact 89.51
d1wzla283 Maltogenic amylase {Thermoactinomyces vulgaris, TV 89.09
d1ua7a2344 Bacterial alpha-amylase {Bacillus subtilis [TaxId: 89.0
d1g5aa2 554 Amylosucrase {Neisseria polysaccharea [TaxId: 489] 88.95
d1qhoa4407 Cyclodextrin glycosyltransferase {Bacillus stearot 87.92
d1jaea2378 Animal alpha-amylase {Yellow mealworm (Tenebrio mo 87.37
d1ea9c280 Maltogenic amylase {Bacillus sp., cyclomaltodextri 85.63
d1uoka2 479 Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 13 85.6
d2d3na2394 Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 83.63
d1m53a2 478 Isomaltulose synthase PalI {Klebsiella sp., lx3 [T 83.61
d1to3a_291 Putative aldolase YihT {Salmonella typhimurium [Ta 82.81
d1gcya2357 G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase 82.81
d2guya2381 Fungal alpha-amylases {Aspergillus oryzae, Taka-am 82.76
d1lwha2391 4-alpha-glucanotransferase {Thermotoga maritima [T 82.45
d1ud2a2390 Bacterial alpha-amylase {Bacillus sp., ksm-k38 [Ta 80.15
>d1uasa2 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Melibiase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=100.00  E-value=2.3e-62  Score=443.83  Aligned_cols=239  Identities=76%  Similarity=1.318  Sum_probs=227.9

Q ss_pred             CccccchhcCccEEEEcccccCCCCCCCCCcccCCCCCCCcHHHHHHHHHHcCCEEEEEecCCCcccCCCCCCccchHHH
Q 038817            1 MVTSGLAALGYQYINLDDCWAELNRDSTGNFVPKASAFPAGIKALADYVHAKGLKLGIYSDAGTQTCSKTMPGSLGHEEQ   80 (303)
Q Consensus         1 ~~~~gl~~~Gy~~v~iDdgW~~~~~d~~G~~~~~~~~FP~G~~~l~~~ih~~Glk~Giy~~pg~~~c~~~~pg~~~~~~~   80 (303)
                      |+++||+++||+||+||||||...++..|+|++|++|||+|||+++++||++|||||||++|+...|..++|+++.|++.
T Consensus        35 ~~~~gl~~~G~~~~~iDdGW~~~~~d~~g~~~~~~~~fP~Gl~~~~~~~~~~G~~~Glw~~~~~~~~~~~~~~~~~~~~~  114 (273)
T d1uasa2          35 LVNTGLAKLGYQYVNIDDCWAEYSRDSQGNFVPNRQTFPSGIKALADYVHAKGLKLGIYSDAGSQTCSNKMPGSLDHEEQ  114 (273)
T ss_dssp             HHHTSHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTCTTCHHHHHHHHHHTTCEEEEEEESSSBCTTSSSBCCTTCHHH
T ss_pred             HHHcCchhhCCeEEEEcCCcCCCCCCCCCCcccCccccCCChHHHHHHHHhCCCeEEEecCCcccccCCCCCcchhhHHH
Confidence            46789999999999999999998888899999999999999999999999999999999999999999889999999999


Q ss_pred             HHHHHHHcCccEEEeecCCCCCCCccchhHHHHHHHHhcCCCeEEEeccCCCCCcCcccccccCeEeecCCCCCchhhHH
Q 038817           81 DAKTFASWGVDYLKYDNCFNTGTSPKERYPIMSKALLNSGRPIFFSLCEWGREDPATWAPKIGNSWRTTGDIKDNWNSMT  160 (303)
Q Consensus        81 ~~~~~~~wGvdylK~D~~~~~~~~~~~~y~~~~~al~~~g~~i~~~~c~~g~~~~~~~~~~~~~~~Ris~D~~~~w~~~~  160 (303)
                      ++++|++|||||||+|||........++|..+.++|++++|++++++|.+|...+..+...++|+||+++|+.+.|+++.
T Consensus       115 d~~~~~~wGvd~vK~D~~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~~~~g~~~~~~~~~~~~~~~R~s~D~~~~w~~~~  194 (273)
T d1uasa2         115 DVKTFASWGVDYLKYDNCNDAGRSVMERYTRMSNAMKTYGKNIFFSLCEWGKENPATWAGRMGNSWRTTGDIADNWGSMT  194 (273)
T ss_dssp             HHHHHHHHTCCEEEEECCCCTTCCHHHHHHHHHHHHHHHCTTSEEEEESTTTTCGGGTGGGTCSEEECSSCCCSSHHHHH
T ss_pred             HHHHHHhCCCceeccccccccchHHHHHHHHHHHHHHHhCCCcEEeecccCCCcchhhhhhhhhhhcccCCcCcchhhHH
Confidence            99999999999999999998877888999999999999999999999998877777777899999999999999999999


Q ss_pred             HHHHhhcccccccCCCCcCCCcceecCCCCCChHHHHHHHHHHHHhcCCeeeccCCCCCCHHHHHhhhchHHHHhhccc
Q 038817          161 SLADQNDKWASYAGPGGYNDPDMLEVGNGGMTTEEYRAHFSIWALAKAPLLIGCDIRAMDKITFNILSNKEVIAVNQDK  239 (303)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~nDpD~l~vg~~~lt~~E~r~~~~~wa~~~spL~~g~dl~~l~~~~~~~l~N~~~iai~qd~  239 (303)
                      .+++....++.+.++++|+||||++++++++|.+|.|+||++|||++|||++|+||++++++.+++|+|+|+||||||.
T Consensus       195 ~~~~~~~~~~~~~g~~~~~D~D~~~~~~~~~t~~E~rt~~al~~i~~~pL~i~~Dl~~l~~~~l~ll~N~e~IAinqd~  273 (273)
T d1uasa2         195 SRADENDQWAAYAGPGGWNDPDMLEVGNGGMSEAEYRSHFSIWALAKAPLLIGCDVRSMSQQTKNILSNSEVIAVNQDS  273 (273)
T ss_dssp             HHHHHHHTTGGGCBTTBEEECCCCCTTSSSSCHHHHHHHHHHHHHTTCCEEECSCTTSCCHHHHHHHTCHHHHHHHTCT
T ss_pred             HHHHHHHHHHHHhCCCcccCccccccCCCCCCHHHHHHHHHHHHHHhchhhhcCCcccCCHHHHHHhcCHHHHhhccCC
Confidence            9888888888889999999999999999999999999999999999999999999999999999999999999999983
>d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ktba2 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1szna2 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1uasa1 b.71.1.1 (A:274-362) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} Back     information, alignment and structure
>d1ktba1 b.71.1.1 (A:294-388) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1r46a1 b.71.1.1 (A:324-421) Melibiase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2f2ha4 c.1.8.13 (A:248-585) Putative glucosidase YicI, domain 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1szna1 b.71.1.1 (A:315-417) Melibiase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d1ji1a2 b.71.1.1 (A:555-637) Maltogenic amylase {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} Back     information, alignment and structure
>d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1hl9a2 c.1.8.11 (A:7-356) Putative alpha-L-fucosidase, catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} Back     information, alignment and structure
>d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} Back     information, alignment and structure
>d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Back     information, alignment and structure
>d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Back     information, alignment and structure
>d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Back     information, alignment and structure
>d1j0ha2 b.71.1.1 (A:506-588) Neopullulanase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} Back     information, alignment and structure
>d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} Back     information, alignment and structure
>d1wzla2 b.71.1.1 (A:503-585) Maltogenic amylase {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Back     information, alignment and structure
>d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} Back     information, alignment and structure
>d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} Back     information, alignment and structure
>d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} Back     information, alignment and structure
>d1ea9c2 b.71.1.1 (C:504-583) Maltogenic amylase {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Back     information, alignment and structure
>d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} Back     information, alignment and structure
>d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} Back     information, alignment and structure
>d1to3a_ c.1.10.1 (A:) Putative aldolase YihT {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} Back     information, alignment and structure
>d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} Back     information, alignment and structure
>d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} Back     information, alignment and structure