Citrus Sinensis ID: 038876

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------
Protein Sequence
MQEHRPFLPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIWDSHGGPFLNADEDLYFFTHLKKKFSKGSRIDRKVGSSGGTWQGEDAGKDIVSGQSKIKIGSKKRFRYEKQG
Secondary Structure (PSIPRED)
cccccccccccccccccHHHHHHHHHHHHHcccccccccccEEEEEEccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccEEccccccEEEEEEEEEEEEcc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccHHHHHHHHHHHHHcccccccccEEEEHEccccccHHHHHcccHHcccccccEEEEEccccccccccccccHHHHHHcccEEcccccccEEccccccEEEEEEEEEEEEcc
Coil and Loop (DISEMBL)
mqehrpflphgfqfrpsDEELIEHYLKkkdsgifipLAEYFIRdcnlyqekpseiwdshggpflnadeDLYFFTHLKKkfskgsridrkvgssggtwqgedagkdivsgQSKIKIGSKKRFRYEKQG
Flexible Loop (DISEMBL)
mqehrpflphgfqfrpsDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIWDSHGGPFLNADEDLYFFTHLKKkfskgsridrkvgssggtwqgedagkdivsgqskikigskkrfryekqg
Low Complexity Region (SEG)
MQEHRPFLPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIWDSHGGPFLNADEDLYFFTHLKKKFSKGSRIDRKVGSSGGTWQGEDAGKDIVsgqskikigskkRFRYEKQG
Disordered region (IsUnstruct)
*******************ELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIWDSHGGPFLNADEDLYFFTHLKKKF***********************************************
Disordered Region (DISOPRED)
*****PF**HGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIWDSHGGPFLNADEDLYFFTHLKKKFSKGSRIDRKVGSSGGTWQGEDAGKDIVSGQSKIKIGSKKRFRYEKQ*
Disordered Region (DISEMBL)
MQEHRPFLPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIWDSHGGPFLNADEDLYFFTHLKKKFSKGSRIDRKVGSSGGTWQGEDAGKDIVSGQSKIKIGSKKRFRYEKQG
Disordered Region (DISPRO)
******FLPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIWDSHGGPFLNADEDLYFFTHLKKKFSKGSRIDRKVGSSGGTWQGEDAGKDIVSGQSKIKIGSKKRFRYEKQG
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MQEHRPFLPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIWDSHGGPFLNADEDLYFFTHLKKKFSKGSRIDRKVGSSGGTWQGEDAGKDIVSGQSKIKIGSKKRFRYEKQG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	127	2.2.26 [Sep-21-2011]
A2YMR0	425	NAC transcription factor	N/A	no	0.834	0.249	0.356	8e-12
Q8H4S4	425	NAC transcription factor	no	no	0.826	0.247	0.370	1e-11
A0SPJ6	396	NAC transcription factor	N/A	no	0.834	0.267	0.365	3e-11
A0SPJ9	402	NAC transcription factor	N/A	no	0.826	0.261	0.359	6e-11
A0SPJ8	406	NAC transcription factor	N/A	no	0.834	0.261	0.350	4e-10
Q8GY42	323	NAC transcription factor	no	no	0.858	0.337	0.338	6e-10
A0SPJ3	405	NAC transcription factor	N/A	no	0.834	0.261	0.344	6e-10
D2SMN4	406	NAC transcription factor	N/A	no	0.834	0.261	0.350	7e-10
Q7F2L3	303	NAC domain-containing pro	no	no	0.732	0.306	0.356	1e-09
A0SPJ4	405	NAC transcription factor	N/A	no	0.834	0.261	0.336	2e-09

>sp|A2YMR0|NAC10_ORYSI NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica GN=ONAC010 PE=3 SV=1

 Score = 68.9 bits (167), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 41/115 (35%), Positives = 66/115 (57%), Gaps = 9/115 (7%)

Query: 6   PFLPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIWDSHGGPFLN 65
           P LP GF+F P+DEEL+ HYLKKK +   +PL    I + +LY+  P E+ +        
Sbjct: 27  PELPPGFRFHPTDEELVVHYLKKKAAS--VPLPVTIIAEVDLYKFDPWELPEKAN----F 80

Query: 66  ADEDLYFFTHLKKKFSKGSRIDRKVGSSGGTWQGEDAGKDIV-SGQSKIKIGSKK 119
            +++ YFF+   +K+  G+R +R   ++ G W+     K I+ SG ++ K+G KK
Sbjct: 81  GEQEWYFFSPRDRKYPNGARPNR--AATSGYWKATGTDKPIMASGSTREKVGVKK 133

Transcription factor of the NAC family associated with male fertility.
Oryza sativa subsp. indica (taxid: 39946)

>sp|Q8H4S4|NAC10_ORYSJ NAC transcription factor ONAC010 OS=Oryza sativa subsp. japonica GN=ONAC010 PE=2 SV=1

 Score = 68.2 bits (165), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 43/116 (37%), Positives = 66/116 (56%), Gaps = 11/116 (9%)

Query: 6   PFLPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIWD-SHGGPFL 64
           P LP GF+F P+DEEL+ HYLKKK +   +PL    I + +LY+  P   WD      F 
Sbjct: 27  PELPPGFRFHPTDEELVVHYLKKKAAS--VPLPVTIIAEVDLYKFDP---WDLPEKANF- 80

Query: 65  NADEDLYFFTHLKKKFSKGSRIDRKVGSSGGTWQGEDAGKDIV-SGQSKIKIGSKK 119
             +++ YFF+   +K+  G+R +R   ++ G W+     K I+ SG ++ K+G KK
Sbjct: 81  -GEQEWYFFSPRDRKYPNGARPNR--AATSGYWKATGTDKPIMSSGSTREKVGVKK 133

Transcription factor of the NAC family associated with male fertility. Involved in anther development, but not in senescence. Reduced expression of NAC5 via RNAi leads to male-sterility.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A0SPJ6|NAMB2_TRIDB NAC transcription factor NAM-B2 OS=Triticum durum GN=NAM-B2 PE=2 SV=1

 Score = 67.4 bits (163), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 42/115 (36%), Positives = 66/115 (57%), Gaps = 9/115 (7%)

Query: 6   PFLPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIWDSHGGPFLN 65
           P LP GF+F P+DEEL+ HYLKKK +   +PL    I + +LY+  P E+ +     F  
Sbjct: 26  PELPPGFRFHPTDEELVVHYLKKKAAK--VPLPVTIITEVDLYKFDPWELPEK--ATF-- 79

Query: 66  ADEDLYFFTHLKKKFSKGSRIDRKVGSSGGTWQGEDAGKDIV-SGQSKIKIGSKK 119
            +++ YFF+   +K+  G+R +R   ++ G W+     K I+ SG  + K+G KK
Sbjct: 80  GEQEWYFFSPRDRKYPNGARPNR--AATSGYWKATGTDKPILASGCGREKVGVKK 132

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) contains one additional gene encoding for a functional protein (NAM-A1) and one extra pseudogene (NAM-B1) (PubMed:17124321). Plays a weaker role in terminal senescence than NAM-A1.

Triticum durum (taxid: 4567)

>sp|A0SPJ9|NAM2_HORVD NAC transcription factor NAM-2 OS=Hordeum vulgare var. distichum GN=NAM-2 PE=4 SV=1

 Score = 66.2 bits (160), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 41/114 (35%), Positives = 65/114 (57%), Gaps = 9/114 (7%)

Query: 6   PFLPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIWDSHGGPFLN 65
           P LP GF+F P+DEEL+ HYLKKK +   +PL    I + +LY+  P E+ +     F  
Sbjct: 26  PELPPGFRFHPTDEELVVHYLKKKAAK--VPLPVTIIAEVDLYKFDPWELPEK--ATF-- 79

Query: 66  ADEDLYFFTHLKKKFSKGSRIDRKVGSSGGTWQGEDAGKDIV-SGQSKIKIGSK 118
            +++ YFF+   +K+  G+R +R   ++ G W+     K I+ SG  + K+G K
Sbjct: 80  GEQEWYFFSPRDRKYPNGARPNR--AATSGYWKATGTDKPILASGCGREKVGVK 131

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. Sequences of 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare var. distichum (taxid: 112509)

>sp|A0SPJ8|NAM1_HORVD NAC transcription factor NAM-1 OS=Hordeum vulgare var. distichum GN=NAM-1 PE=4 SV=1

 Score = 63.5 bits (153), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 11/117 (9%)

Query: 6   PFLPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIWDSHGGPFLN 65
           P LP GF+F P+DEEL+ HYLKKK +    PL    I + +LY+  P E+ +     F  
Sbjct: 33  PELPPGFRFHPTDEELVVHYLKKKAAK--APLPVTIIAEVDLYKFDPWELPEK--ATF-- 86

Query: 66  ADEDLYFFTHLKKKFSKGSRIDRKVGSSGGTWQGEDAGKDIV---SGQSKIKIGSKK 119
            + + YFF+   +K++ G+R +R   ++ G W+     K I+   +G  + K+G KK
Sbjct: 87  GEHEWYFFSPRDRKYANGARPNR--AATSGYWKATGTDKPILASATGCGREKVGVKK 141

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. Sequences of 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare var. distichum (taxid: 112509)

>sp|Q8GY42|NAC25_ARATH NAC transcription factor 25 OS=Arabidopsis thaliana GN=NAC025 PE=2 SV=1

 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 63/118 (53%), Gaps = 9/118 (7%)

Query: 6   PFLPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIWDSHGGPFLN 65
           P LP GF+F P+DEEL+ HYLKKK   + +P++   I + +LY+  P E+       F  
Sbjct: 14  PHLPPGFRFHPTDEELVVHYLKKKADSVPLPVS--IIAEIDLYKFDPWEL--PSKASF-- 67

Query: 66  ADEDLYFFTHLKKKFSKGSRIDRKVGSSGGTWQGEDAGKDIVSGQSKIKIGSKKRFRY 123
            + + YFF+   +K+  G R +R   ++ G W+     K I +  S  K+G KK   +
Sbjct: 68  GEHEWYFFSPRDRKYPNGVRPNR--AATSGYWKATGTDKPIFTCNSH-KVGVKKALVF 122

Transcription factor of the NAC family. May be associated with anther development and pollen production.

Arabidopsis thaliana (taxid: 3702)

>sp|A0SPJ3|NAMA1_TRIDB NAC transcription factor NAM-A1 OS=Triticum durum GN=NAM-A1 PE=2 SV=1

 Score = 62.8 bits (151), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 41/119 (34%), Positives = 66/119 (55%), Gaps = 13/119 (10%)

Query: 6   PFLPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIWDSHGGPFLN 65
           P LP GF+F P+DEEL+ HYLKKK +   +PL    I + +LY+  P E+ +     F  
Sbjct: 31  PELPPGFRFHPTDEELVVHYLKKKAAK--VPLPVTIIAEVDLYKFDPWELPEK--ATF-- 84

Query: 66  ADEDLYFFTHLKKKFSKGSRIDRKVGSSGGTWQGEDAGKDIVS-----GQSKIKIGSKK 119
            +++ YFF+   +K+  G+R +R   ++ G W+     K I++     G  + K+G KK
Sbjct: 85  GEQEWYFFSPRDRKYPNGARPNR--AATSGYWKATGTDKPILASGTGCGLVREKLGVKK 141

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) contains one additional gene encoding for a functional protein (NAM-B2) and one extra pseudogene (NAM-B1) (PubMed:17124321).

Triticum durum (taxid: 4567)

>sp|D2SMN4|NAMB1_HORVS NAC transcription factor NAM-B1 OS=Hordeum vulgare subsp. spontaneum GN=NAM-B1 PE=4 SV=1

 Score = 62.4 bits (150), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 41/117 (35%), Positives = 64/117 (54%), Gaps = 11/117 (9%)

Query: 6   PFLPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIWDSHGGPFLN 65
           P LP GF+F P+DEEL+ HYLKKK +    PL    I + +LY+  P E+ +     F  
Sbjct: 33  PELPPGFRFHPTDEELVVHYLKKKAAK--APLPVTIIAEVDLYKFDPWELPEK--ATF-- 86

Query: 66  ADEDLYFFTHLKKKFSKGSRIDRKVGSSGGTWQGEDAGKDIV---SGQSKIKIGSKK 119
            + + YFF+   +K+  G+R +R   ++ G W+     K I+   +G  + K+G KK
Sbjct: 87  GEHEWYFFSPRDRKYPNGARPNR--AATSGYWKATGTDKPILASATGCGREKVGVKK 141

Transcription factor of the NAC family associated with the grain protein content (GPC). Sequences of the 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare subsp. spontaneum (taxid: 77009)

>sp|Q7F2L3|NAC48_ORYSJ NAC domain-containing protein 48 OS=Oryza sativa subsp. japonica GN=NAC48 PE=2 SV=1

 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 58/101 (57%), Gaps = 8/101 (7%)

Query: 8   LPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIWDSHGGPFLNAD 67
           LP GF+F P+DEEL+ HYL ++ +G  +P+A   I + +LY+  P ++        L  +
Sbjct: 9   LPPGFRFHPTDEELVMHYLCRRCAG--LPIAVPIIAEIDLYKFDPWQLPRMA----LYGE 62

Query: 68  EDLYFFTHLKKKFSKGSRIDRKVGSSGGTWQGEDAGKDIVS 108
           ++ YFF+   +K+  GSR +R  GS  G W+   A K + S
Sbjct: 63  KEWYFFSPRDRKYPNGSRPNRAAGS--GYWKATGADKPVGS 101

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A0SPJ4|NAMB1_TRIDC NAC transcription factor NAM-B1 OS=Triticum dicoccoides GN=NAM-B1 PE=4 SV=1

 Score = 61.6 bits (148), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 13/119 (10%)

Query: 6   PFLPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIWDSHGGPFLN 65
           P LP GF+F P+DEEL+ HYLKKK      PL    I + +LY+  P E+ +        
Sbjct: 32  PELPPGFRFHPTDEELVVHYLKKKADK--APLPVNIIAEVDLYKFDPWELPEKA----TI 85

Query: 66  ADEDLYFFTHLKKKFSKGSRIDRKVGSSGGTWQGEDAGKDIVS-----GQSKIKIGSKK 119
            +++ YFF+   +K+  G+R +R   ++ G W+     K I++     G  + K+G KK
Sbjct: 86  GEQEWYFFSPRDRKYPNGARPNR--AATSGYWKATGTDKPILASGTGCGLVREKLGVKK 142

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) and the hexaploid wheat (T.aestivum) carry a one bp insertion generating a non-functional allele of this gene. They have a delayed senescence and a lower grain protein, zinc and iron content (PubMed:17124321).

Triticum dicoccoides (taxid: 85692)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	127
224054492	322	NAC domain protein, IPR003441 [Populus t	0.913	0.360	0.459	7e-19
255577747	131	conserved hypothetical protein [Ricinus	0.921	0.893	0.459	4e-18
255580284	508	transcription factor, putative [Ricinus	0.866	0.216	0.442	1e-16
255584644	376	NAC domain-containing protein, putative	0.937	0.316	0.409	2e-16
224139634	340	NAC domain protein, IPR003441 [Populus t	0.976	0.364	0.434	3e-15
224147620	402	NAC domain protein, IPR003441 [Populus t	0.976	0.308	0.412	5e-15
255553637	457	conserved hypothetical protein [Ricinus	0.881	0.245	0.422	6e-15
449440315	170	PREDICTED: protein CUP-SHAPED COTYLEDON	0.874	0.652	0.425	7e-15
449457267	211	PREDICTED: NAC domain-containing protein	0.874	0.526	0.416	1e-14
224110282	432	NAC domain protein, IPR003441 [Populus t	0.976	0.287	0.404	1e-14

>gi|224054492|ref|XP_002298287.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222845545|gb|EEE83092.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score = 98.6 bits (244), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 57/124 (45%), Positives = 73/124 (58%), Gaps = 8/124 (6%)

Query: 8   LPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIWDSHGGPFL--- 64
           +P G +F PSDE L+ HYL KK     +P   Y +R+C+LY  +P EIW   GG  L   
Sbjct: 18  MPTGCRFAPSDEVLVIHYLSKKGKNEPLPCP-YAVRECDLYGREPEEIWKEFGGDRLKRK 76

Query: 65  -NADEDLYFFTHLKKKFSK---GSRIDRKVGSSGGTWQGEDAGKDIVSGQSKIKIGSKKR 120
            + D  L+FFT LKKK       SRIDR VG++ GTW  E A + I   ++K  IGSKKR
Sbjct: 77  IDQDLGLFFFTRLKKKSGTDHGSSRIDRSVGNNIGTWHEECALRSITCSETKKNIGSKKR 136

Query: 121 FRYE 124
           F Y+
Sbjct: 137 FVYK 140

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255577747|ref|XP_002529748.1| conserved hypothetical protein [Ricinus communis] gi|223530746|gb|EEF32614.1| conserved hypothetical protein [Ricinus communis]

 Score = 95.9 bits (237), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 57/124 (45%), Positives = 70/124 (56%), Gaps = 7/124 (5%)

Query: 8   LPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLY-QEKPSEIWDSHGGPFLNA 66
           LP GF+F P+D EL  HYL KK +G  +P+ + ++  C+LY Q  P  IWD  GG  L  
Sbjct: 3   LPPGFRFDPTDTELFSHYLYKKINGTLLPMQKLYVTVCDLYGQNDPWIIWDKFGGNSLTE 62

Query: 67  DEDLYFFTHLKKKFSKGS-RIDRKVGSS-GGTWQGEDAGKDI----VSGQSKIKIGSKKR 120
            +DLYFF+ LKKK  K   R DR VG    GTW GE   K I     S  ++   G KKR
Sbjct: 63  KDDLYFFSKLKKKTDKSCKRFDRNVGVDRKGTWSGEKLDKTIQFKLSSSHNRTIQGLKKR 122

Query: 121 FRYE 124
           F YE
Sbjct: 123 FSYE 126

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255580284|ref|XP_002530971.1| transcription factor, putative [Ricinus communis] gi|223529447|gb|EEF31406.1| transcription factor, putative [Ricinus communis]

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 54/122 (44%), Positives = 80/122 (65%), Gaps = 12/122 (9%)

Query: 8   LPHGFQFRPSDEELIEHYLKKKDSGIFIPLA-EYFIRDCNLYQE-KPSEIWDSHGGPFLN 65
           LP G++F P+D+EL+ HYL  + +    PL+ +YFI + ++Y + +P +IWDS G     
Sbjct: 13  LPPGYRFDPTDQELVLHYLLNRVARK--PLSCQYFISEIDIYGDMEPWQIWDSLG----K 66

Query: 66  ADED-LYFFTHLKKKFSKGSRIDRKVGSSGGTWQGEDAGKDIVSGQSKIKIGSKKRFRYE 124
           AD D LY FT LKK+ + GS I R++GS+GG+W GED+GK+      K    ++KRFRYE
Sbjct: 67  ADNDVLYVFTPLKKRAANGSTILRRIGSNGGSWHGEDSGKEFKLNGVK---WTQKRFRYE 123

Query: 125 KQ 126
            +
Sbjct: 124 NR 125

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255584644|ref|XP_002533045.1| NAC domain-containing protein, putative [Ricinus communis] gi|223527164|gb|EEF29335.1| NAC domain-containing protein, putative [Ricinus communis]

 Score = 90.1 bits (222), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/127 (40%), Positives = 79/127 (62%), Gaps = 8/127 (6%)

Query: 1   MQEHRPFLPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLY-QEKPSEIWDSH 59
           MQ+ +  +P G++F P+D EL+ +YL  K +G  +P+    + D NLY +++P ++W+  
Sbjct: 1   MQQLKDQIPVGYRFNPTDCELVGYYLFNKLNGCLLPIDNMLVADTNLYGKDEPLQLWEKF 60

Query: 60  GGPF-LNADEDLYFFTHLKKKFSKGSRIDRKVGSSGGTWQGEDAGKD--IVSGQSKIKIG 116
           GG     +D ++Y FT LKK   KGSRI R VG +GGTW G DAGK   I + + ++  G
Sbjct: 61  GGNCSFYSDGEIYLFTKLKK---KGSRILRSVG-AGGTWHGVDAGKPVRIKTNRGQLIEG 116

Query: 117 SKKRFRY 123
           +KK F Y
Sbjct: 117 TKKCFSY 123

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224139634|ref|XP_002323203.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222867833|gb|EEF04964.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score = 86.3 bits (212), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/129 (43%), Positives = 77/129 (59%), Gaps = 5/129 (3%)

Query: 1   MQEHRPFLPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLY-QEKPSEIWDSH 59
           M+   P  P GF+F P++EELI +YL  K  G F       I+D +LY +E+P EI++  
Sbjct: 1   MENGLPRPPPGFKFVPTEEELINYYLYNKIHGRFHGEDATLIKDYDLYGEEEPWEIFNKF 60

Query: 60  GGPFLNADEDLYFFTHLKKKFSKGSR-IDRKVGSSGGTWQGEDAGKDIVSGQSKIKIGSK 118
            G     D  LYF T L KK + G + ++R VG+ GGTW G D GK++ S +  + IG+K
Sbjct: 61  QGHKF-GDNGLYFLTTLHKKTTNGIKNMNRSVGTHGGTWHG-DGGKEVKSSEG-VVIGTK 117

Query: 119 KRFRYEKQG 127
           KRFRY K G
Sbjct: 118 KRFRYHKHG 126

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224147620|ref|XP_002336513.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222835806|gb|EEE74241.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score = 85.9 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 54/131 (41%), Positives = 71/131 (54%), Gaps = 7/131 (5%)

Query: 1   MQEHRPFLPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQE---KPSEIWD 57
           MQ+    LP GF+F P+DEELI +YL +K  G   P     I+ CNLY E    P EI+ 
Sbjct: 1   MQDILSRLPPGFRFLPTDEELIRYYLHRKVHGRLTPEEADVIKLCNLYGEGARPPCEIFK 60

Query: 58  SHGGPFLNADEDLYFFTHLKKKF--SKGSRIDRKVGSSGGTWQGEDAGKDIVSGQSKIKI 115
             G      D+ LYFFT L KK   S   R+ R VG+ GGTW G+   + I    +    
Sbjct: 61  LAGHK--GGDDALYFFTILIKKTLNSSTQRMSRTVGTDGGTWHGDGVEEVICRLDNTEFK 118

Query: 116 GSKKRFRYEKQ 126
           G+K+RFRY+ +
Sbjct: 119 GTKRRFRYQNK 129

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255553637|ref|XP_002517859.1| conserved hypothetical protein [Ricinus communis] gi|223542841|gb|EEF44377.1| conserved hypothetical protein [Ricinus communis]

 Score = 85.5 bits (210), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 49/116 (42%), Positives = 71/116 (61%), Gaps = 4/116 (3%)

Query: 11  GFQFRPSDEELIEHYLKKKDSGIFIPLA-EYFIRDCNLY-QEKPSEIWDSHGGPFLNADE 68
           G++F P+DEEL+ +YL+ K++G       +  ++ C+ Y +E+P EIW   GG  L+  E
Sbjct: 17  GYRFCPTDEELVTYYLQGKNNGSLSSFENQLLVKYCDFYGKEEPWEIWKRFGGDKLSVHE 76

Query: 69  DLYFFTHLKKKFSK-GSRIDRKVGSSGGTWQGEDAGKDIVSGQSKIKIGSKKRFRY 123
           DL+FFT LKK   + GS+I+R+VGSS GTW  E +G   V     +    KKRF Y
Sbjct: 77  DLFFFTTLKKVAPEGGSKINRRVGSSAGTWHCETSGNSSVIRYQNLT-AYKKRFNY 131

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449440315|ref|XP_004137930.1| PREDICTED: protein CUP-SHAPED COTYLEDON 1-like [Cucumis sativus]

 Score = 85.5 bits (210), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 51/120 (42%), Positives = 72/120 (60%), Gaps = 9/120 (7%)

Query: 7   FLPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIWDSHGGPFLNA 66
            +P G+ F P++EEL+ +YL  K  G   P     + D  LY ++PS+IW    G     
Sbjct: 39  LIPVGYVFCPTEEELLGYYLYNKVLGGQAPPLVLPVID--LYTQEPSQIWQQCRG---VD 93

Query: 67  DEDLYFFTHLKKKFSKGSRIDRKVGSSGGTWQGEDAGKDIVSG-QSKIKIGSKKRFRYEK 125
           ++D+YFFT L+KK    SRI RKVGS+GGTW GE+  + + S     + +G+ KRFRYEK
Sbjct: 94  NQDIYFFTTLQKK---KSRIIRKVGSNGGTWSGENKPQQVFSSIIDNLLLGTMKRFRYEK 150

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449457267|ref|XP_004146370.1| PREDICTED: NAC domain-containing protein 90-like [Cucumis sativus]

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/120 (41%), Positives = 72/120 (60%), Gaps = 9/120 (7%)

Query: 7   FLPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIWDSHGGPFLNA 66
            +P G+ F P++EEL+ +YL  K  G   P     + D  LY ++PS+IW    G     
Sbjct: 5   LIPVGYIFCPTEEELLGYYLYNKVLGGQTPPLVLPVID--LYTQEPSQIWQQCRGV---D 59

Query: 67  DEDLYFFTHLKKKFSKGSRIDRKVGSSGGTWQGEDAGKDIVSG-QSKIKIGSKKRFRYEK 125
           ++D+YFFT L+KK    SRI RK+GS+GGTW GE+  + + S     + +G+ KRFRYEK
Sbjct: 60  NQDIYFFTTLQKK---KSRIIRKIGSNGGTWSGENKPQQVFSSIIDNLLLGTMKRFRYEK 116

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224110282|ref|XP_002333120.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222834917|gb|EEE73366.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 53/131 (40%), Positives = 71/131 (54%), Gaps = 7/131 (5%)

Query: 1   MQEHRPFLPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQE---KPSEIWD 57
           MQ+    LP GF+F P+DEELI +YL +K  G   P     I+ CN+Y E    P EI+ 
Sbjct: 1   MQDILSRLPPGFRFLPTDEELIRYYLHRKVHGRLTPEEADMIKLCNVYGEGARPPCEIFK 60

Query: 58  SHGGPFLNADEDLYFFTHLKKKF--SKGSRIDRKVGSSGGTWQGEDAGKDIVSGQSKIKI 115
             G      D+ LYFFT L KK   S   R+ R VG+ GGTW G+   + I    +    
Sbjct: 61  LAGHK--GGDDALYFFTILIKKTLNSSTQRMSRTVGTDGGTWHGDGVEEVICRLDNTEFK 118

Query: 116 GSKKRFRYEKQ 126
           G+K+RFRY+ +
Sbjct: 119 GTKRRFRYQNK 129

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	127
TAIR|locus:2097720	479	NAC045 "NAC domain containing	0.700	0.185	0.414	5.3e-12
TAIR|locus:2142285	292	NAC096 "NAC domain containing	0.708	0.308	0.428	1.4e-11
TAIR|locus:2033745	283	NAC011 "NAC domain containing	0.708	0.318	0.4	2.1e-11
TAIR|locus:2095908	359	NAC047 "NAC domain containing	0.740	0.261	0.375	3.5e-11
TAIR|locus:2167155	476	NAC086 "NAC domain containing	0.700	0.186	0.393	8.1e-11
TAIR|locus:2011516	320	NAM "NO APICAL MERISTEM" [Arab	0.748	0.296	0.339	9.1e-11
TAIR|locus:2141075	262	NAC071 "NAC domain containing	0.700	0.339	0.404	9.5e-11
TAIR|locus:2089764	246	NAC057 "NAC domain containing	0.700	0.361	0.393	1.6e-10
TAIR|locus:2202028	395	NAC007 "NAC 007" [Arabidopsis	0.700	0.225	0.37	2e-10
TAIR|locus:2167923	348	NAC101 "NAC-domain protein 101	0.716	0.261	0.357	2.4e-10

TAIR|locus:2097720 NAC045 "NAC domain containing protein 45" [Arabidopsis thaliana (taxid:3702)]

 Score = 170 (64.9 bits), Expect = 5.3e-12, P = 5.3e-12
 Identities = 41/99 (41%), Positives = 60/99 (60%)

Query:     8 LPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIWDSHGGPFL-NA 66
             LP GF+F P+DEELI +YLK+K +G+ I L    I + +LY+ +P   WD  G   L + 
Sbjct:     6 LPPGFRFHPTDEELITYYLKRKINGLEIELE--VIAEVDLYKCEP---WDLPGKSLLPSK 60

Query:    67 DEDLYFFTHLKKKFSKGSRIDRKVGSSGGTWQGEDAGKD 105
             D++ YFF+   +K+  GSR +R   + GG W+    GKD
Sbjct:    61 DQEWYFFSPRDRKYPNGSRTNR--ATKGGYWKA--TGKD 95

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2142285 NAC096 "NAC domain containing protein 96" [Arabidopsis thaliana (taxid:3702)]

 Score = 161 (61.7 bits), Expect = 1.4e-11, P = 1.4e-11
 Identities = 42/98 (42%), Positives = 54/98 (55%)

Query:     8 LPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIWDSHGGPFLNAD 67
             LP GF+F P+DEELIE+YLK+K  G+ I L    + D  LY   P E+ D    P  N D
Sbjct:     6 LPPGFRFHPTDEELIEYYLKRKVEGLEIELEVIPVID--LYSFDPWELPDKSFLP--NRD 61

Query:    68 EDLYFFTHLKKKFSKGSRIDRKVGSSGGTWQGEDAGKD 105
              + YFF    KK+  G R +R  G+  G W+    GKD
Sbjct:    62 MEWYFFCSRDKKYPNGFRTNR--GTKAGYWKA--TGKD 95

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2033745 NAC011 "NAC domain containing protein 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 159 (61.0 bits), Expect = 2.1e-11, P = 2.1e-11
 Identities = 40/100 (40%), Positives = 57/100 (57%)

Query:     7 FLPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIWDSHGGPFL-N 65
             FLP GF+F P+DEEL+ +YL +++ G+ I L    + D  LY+  P   W+     FL N
Sbjct:     5 FLPPGFRFYPTDEELVGYYLHRRNEGLEIELEIIPLMD--LYKFDP---WELPEKSFLPN 59

Query:    66 ADEDLYFFTHLKKKFSKGSRIDRKVGSSGGTWQGEDAGKD 105
              D + +FF H  +K+  GSRI+R   S  G W+    GKD
Sbjct:    60 RDMEWFFFCHRDRKYQNGSRINRATKS--GYWKA--TGKD 95

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2095908 NAC047 "NAC domain containing protein 47" [Arabidopsis thaliana (taxid:3702)]

 Score = 160 (61.4 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 39/104 (37%), Positives = 58/104 (55%)

Query:     2 QEHRPFLPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIWDSHG- 60
             ++ R  LP GF+F P+DEELI HYL+KK S   +PL+   I D ++Y+  P   WD    
Sbjct:     4 KDPRSSLPPGFRFHPTDEELILHYLRKKVSSSPVPLS--IIADVDIYKSDP---WDLPAK 58

Query:    61 GPFLNADEDLYFFTHLKKKFSKGSRIDRKVGSSGGTWQGEDAGK 104
              PF   +++ YFF+   +K+  G+R +R   S  G W+     K
Sbjct:    59 APF--GEKEWYFFSPRDRKYPNGARPNRAAAS--GYWKATGTDK 98

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006865 "amino acid transport" evidence=RCA

GO:0010260 "organ senescence" evidence=RCA

TAIR|locus:2167155 NAC086 "NAC domain containing protein 86" [Arabidopsis thaliana (taxid:3702)]

 Score = 159 (61.0 bits), Expect = 8.1e-11, P = 8.1e-11
 Identities = 39/99 (39%), Positives = 59/99 (59%)

Query:     8 LPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIWDSHGGPFL-NA 66
             LP GF+F P+DEELI +YLK+K +G  I L    I + +LY+ +P   WD  G   + + 
Sbjct:     6 LPPGFRFHPTDEELITYYLKRKINGQEIELE--IIPEVDLYKCEP---WDLPGKSLIPSK 60

Query:    67 DEDLYFFTHLKKKFSKGSRIDRKVGSSGGTWQGEDAGKD 105
             D++ +FF+   +K+  GSR +R   + GG W+    GKD
Sbjct:    61 DQEWFFFSPRDRKYPNGSRTNR--ATKGGYWKA--TGKD 95

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2011516 NAM "NO APICAL MERISTEM" [Arabidopsis thaliana (taxid:3702)]

 Score = 155 (59.6 bits), Expect = 9.1e-11, P = 9.1e-11
 Identities = 35/103 (33%), Positives = 59/103 (57%)

Query:     5 RPFLPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIWDSHGGPFL 64
             +P LP GF+F P+DEEL+ HYLK+K   + +P+A   I D +LY+  P E+       F 
Sbjct:    14 QPNLPPGFRFHPTDEELVIHYLKRKADSVPLPVA--IIADVDLYKFDPWEL--PAKASF- 68

Query:    65 NADEDLYFFTHLKKKFSKGSRIDRKVGSSGGTWQGEDAGKDIV 107
               +++ YFF+   +K+  G+R +R   ++ G W+     K ++
Sbjct:    69 -GEQEWYFFSPRDRKYPNGARPNR--AATSGYWKATGTDKPVI 108

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

TAIR|locus:2141075 NAC071 "NAC domain containing protein 71" [Arabidopsis thaliana (taxid:3702)]

 Score = 152 (58.6 bits), Expect = 9.5e-11, P = 9.5e-11
 Identities = 40/99 (40%), Positives = 55/99 (55%)

Query:     8 LPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIWDSHGGPFL-NA 66
             LP GF+F P+DEELI +YL +K  G+ I L    + D  LY+  P   W+  G  FL N 
Sbjct:     6 LPPGFRFHPTDEELIGYYLSRKIEGLEIELEVIPVID--LYKFDP---WELPGKSFLPNR 60

Query:    67 DEDLYFFTHLKKKFSKGSRIDRKVGSSGGTWQGEDAGKD 105
             D + +FF    KK++ GSR +R   +  G W+    GKD
Sbjct:    61 DLEWFFFCPRDKKYANGSRTNR--ATKAGYWKA--TGKD 95

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2089764 NAC057 "NAC domain containing protein 57" [Arabidopsis thaliana (taxid:3702)]

 Score = 149 (57.5 bits), Expect = 1.6e-10, P = 1.6e-10
 Identities = 39/99 (39%), Positives = 56/99 (56%)

Query:     8 LPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIWDSHGGPFL-NA 66
             LP GF+F P+DEEL+ +YLK+K +G  I L    I + +LY+ +P   WD     FL + 
Sbjct:     6 LPPGFRFHPTDEELVNYYLKRKINGQEIELD--IIPEVDLYKCEP---WDLAEKSFLPSR 60

Query:    67 DEDLYFFTHLKKKFSKGSRIDRKVGSSGGTWQGEDAGKD 105
             D + YFF    +K+  G R +R   + GG W+    GKD
Sbjct:    61 DPEWYFFGPRDRKYPNGFRTNR--ATRGGYWKS--TGKD 95

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2202028 NAC007 "NAC 007" [Arabidopsis thaliana (taxid:3702)]

 Score = 154 (59.3 bits), Expect = 2.0e-10, P = 2.0e-10
 Identities = 37/100 (37%), Positives = 59/100 (59%)

Query:     8 LPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIWDSHGGPFLNAD 67
             +P GF+F P+DEEL+++YL+KK +   I +   FI+D +LY+ +P   WD      +  +
Sbjct:     7 VPPGFRFHPTDEELVDYYLRKKVASKRIEID--FIKDIDLYKIEP---WDLQELCKIGHE 61

Query:    68 E--DLYFFTHLKKKFSKGSRIDRKVGSSGGTWQGEDAGKD 105
             E  D YFF+H  KK+  G+R +R   +  G W+    G+D
Sbjct:    62 EQSDWYFFSHKDKKYPTGTRTNR--ATKAGFWKA--TGRD 97

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0009793 "embryo development ending in seed dormancy" evidence=NAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0042546 "cell wall biogenesis" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

TAIR|locus:2167923 NAC101 "NAC-domain protein 101" [Arabidopsis thaliana (taxid:3702)]

 Score = 152 (58.6 bits), Expect = 2.4e-10, P = 2.4e-10
 Identities = 35/98 (35%), Positives = 58/98 (59%)

Query:     8 LPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIWDSHGGPFLNAD 67
             +P G++F P+DEEL+++YLK K +  F  +    I+D +LY+ +P +I +  G      +
Sbjct:     7 IPPGYRFHPTDEELVDYYLKNKVA--FPGMQVDVIKDVDLYKIEPWDIQELCGRG-TGEE 63

Query:    68 EDLYFFTHLKKKFSKGSRIDRKVGSSGGTWQGEDAGKD 105
              + YFF+H  KK+  G+R +R  GS  G W+    G+D
Sbjct:    64 REWYFFSHKDKKYPTGTRTNRATGS--GFWKA--TGRD 97

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0009735 "response to cytokinin stimulus" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0009741 "response to brassinosteroid stimulus" evidence=IEP;RCA

GO:0010089 "xylem development" evidence=RCA;IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0007155 "cell adhesion" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010090 "trichome morphogenesis" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

GO:0045010 "actin nucleation" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	127
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	8e-22

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score = 83.4 bits (207), Expect = 8e-22
 Identities = 41/116 (35%), Positives = 65/116 (56%), Gaps = 7/116 (6%)

Query: 8   LPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIWDSHGGPFLNAD 67
           LP GF+F P+DEEL+ +YLK+K  G  +PL +  I + ++Y+ +P   WD   G     D
Sbjct: 1   LPPGFRFHPTDEELVVYYLKRKVLGKPLPLLD-VIPEVDIYKFEP---WDLPDGKAKGGD 56

Query: 68  EDLYFFTHLKKKFSKGSRIDRKVGSSGGTWQGEDAGKDIVSGQSKIKIGSKKRFRY 123
            + YFF+   +K+  GSR +R  GS  G W+     K ++S   ++ +G KK   +
Sbjct: 57  REWYFFSPRDRKYPNGSRTNRATGS--GYWKATGKDKPVLSKGGEV-VGMKKTLVF 109

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	127
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=1.8e-40  Score=233.07  Aligned_cols=110  Identities=40%  Similarity=0.683  Sum_probs=78.9

Q ss_pred             CCCCeeECCChHHHHHHHHHhhhcCCCCCcccCccccccCCCCCCccccccCCCCccCCCCcEEEEeccccccCCCCccc
Q 038876            8 LPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIWDSHGGPFLNADEDLYFFTHLKKKFSKGSRID   87 (127)
Q Consensus         8 lp~G~rF~PTDeELi~~YL~~K~~g~~lp~~~~~I~~~Dvy~~~P~~L~~~~~~~~~~~~~~wyFF~~~~~k~~~g~R~~   87 (127)
                      |||||||+|||+|||.+||++|+.|.++|. ..+|+++|||++|||+|+..+.    ..+++|||||++++++.++.|.+
T Consensus         1 LP~G~rF~PtD~ELi~~yL~~k~~g~~~~~-~~~i~~~Diy~~~P~~L~~~~~----~~~~~~yFF~~~~~~~~~~~r~~   75 (129)
T PF02365_consen    1 LPPGFRFRPTDEELINHYLRPKILGEPLPC-EDVIHDVDIYSAHPWELPAKFK----GGDEEWYFFSPRKKKYPNGGRPN   75 (129)
T ss_dssp             --TTEEE---HHHHHHCTHHHHHTT-HHCS--CHSEE--GGGS-GGGCHHHSS----S-SSEEEEEEE----------S-
T ss_pred             CCCceEecCChHHHHHHHHHHHhcCCCCCc-ccceeecccCccChHHhhhhcc----CCCceEEEEEecccccCCccccc
Confidence            899999999999999999999999999887 5789999999999999995322    25679999999999998999999


Q ss_pred             ceecCCCceEeeccCCceEEeCCCceEEEEEEEEEEEe
Q 038876           88 RKVGSSGGTWQGEDAGKDIVSGQSKIKIGSKKRFRYEK  125 (127)
Q Consensus        88 R~~g~~~G~W~~~g~~~~I~~~~~~~~iG~kk~l~f~~  125 (127)
                      |++  ++|+||++|+.++|.+. ++++||+|++|+||.
T Consensus        76 R~~--~~G~Wk~~g~~~~i~~~-~g~~iG~k~~l~f~~  110 (129)
T PF02365_consen   76 RVT--GGGYWKSTGKEKPIKDP-GGKVIGFKKTLVFYS  110 (129)
T ss_dssp             EEE--TTEEEEEECEEEEEEE--TTCEEEEEEEEEEEE
T ss_pred             ccc--cceEEeecccccccccc-cceeeeeEEEEEEEe
Confidence            987  69999999999999986 578999999999995

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	127
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		8e-11
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		3e-07
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		3e-07

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score = 62.0 bits (149), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 38/100 (38%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 8   LPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIWDSHGGPFLNAD 67
           LP GF+F P+D+EL+EHYL +K +G  +P+    I + +LY+  P   WD        A 
Sbjct: 15  LPPGFRFHPTDDELVEHYLCRKAAGQRLPVP--IIAEVDLYKFDP---WDLPERALFGAR 69
Query: 68  EDLYFFTHLKKKFSKGSRIDRKVGSSGGTWQGEDAGKDIV 107
           E  YFFT   +K+  GSR +R  G+  G W+   A K + 
Sbjct: 70  E-WYFFTPRDRKYPNGSRPNRAAGN--GYWKATGADKPVA 106

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 12/110 (10%)
Query: 1   MQEHRPF----LPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIW 56
           +QE  P     LP GF+F P+DEEL+  YL +K +G    L    I + +LY+  P  + 
Sbjct: 9   IQETDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQ--LIAEIDLYKFDPWVLP 66
Query: 57  DSHGGPFLNADEDLYFFTHLKKKFSKGSRIDRKVGSSGGTWQGEDAGKDI 106
           +      L  +++ YFF+   +K+  GSR +R  GS  G W+     K I
Sbjct: 67  NKA----LFGEKEWYFFSPRDRKYPNGSRPNRVAGS--GYWKATGTDKII 110

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 12/110 (10%)
Query: 1   MQEHRPF----LPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIW 56
           +QE  P     LP GF+F P+DEEL+  YL +K +G    L    I + +LY+  P  + 
Sbjct: 6   IQETDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQ--LIAEIDLYKFDPWVLP 63
Query: 57  DSHGGPFLNADEDLYFFTHLKKKFSKGSRIDRKVGSSGGTWQGEDAGKDI 106
           +      L  +++ YFF+   +K+  GSR +R  GS  G W+     K I
Sbjct: 64  NKA----LFGEKEWYFFSPRDRKYPNGSRPNRVAGS--GYWKATGTDKII 107

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	127
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	4e-17
1ut7_A	171	No apical meristem protein; transcription regulati	5e-17

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score = 72.0 bits (177), Expect = 4e-17
 Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 10/112 (8%)

Query: 8   LPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIWDSHGGPFLNAD 67
           LP GF+F P+D+EL+EHYL +K +G  +P+    I + +LY+  P   WD          
Sbjct: 15  LPPGFRFHPTDDELVEHYLCRKAAGQRLPVP--IIAEVDLYKFDP---WDLPERALFG-A 68

Query: 68  EDLYFFTHLKKKFSKGSRIDRKVGSSGGTWQGEDAGKDIVSGQSKIKIGSKK 119
            + YFFT   +K+  GSR +R  G+  G W+    G D         +G KK
Sbjct: 69  REWYFFTPRDRKYPNGSRPNRAAGN--GYWKA--TGADKPVAPRGRTLGIKK 116

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score = 71.6 bits (176), Expect = 5e-17
 Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 10/112 (8%)

Query: 8   LPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIWDSHGGPFLNAD 67
           LP GF+F P+DEEL+  YL +K +G    L    I + +LY+  P   W          +
Sbjct: 17  LPPGFRFYPTDEELMVQYLCRKAAGYDFSLQ--LIAEIDLYKFDP---WVLPNKALFG-E 70

Query: 68  EDLYFFTHLKKKFSKGSRIDRKVGSSGGTWQGEDAGKDIVSGQSKIKIGSKK 119
           ++ YFF+   +K+  GSR +R  GS  G W+    G D +      ++G KK
Sbjct: 71  KEWYFFSPRDRKYPNGSRPNRVAGS--GYWKA--TGTDKIISTEGQRVGIKK 118

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	127
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=1.4e-44  Score=265.05  Aligned_cols=114  Identities=32%  Similarity=0.604  Sum_probs=99.3

Q ss_pred             CCCCCCCCCeeECCChHHHHHHHHHhhhcCCCCCcccCccccccCCCCCCccccccCCCCccCCCCcEEEEeccccccCC
Q 038876            3 EHRPFLPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIWDSHGGPFLNADEDLYFFTHLKKKFSK   82 (127)
Q Consensus         3 ~~~~~lp~G~rF~PTDeELi~~YL~~K~~g~~lp~~~~~I~~~Dvy~~~P~~L~~~~~~~~~~~~~~wyFF~~~~~k~~~   82 (127)
                      +.++.|||||||+|||||||.|||++|+.|.++|.  .+|+++|||++|||+||+...    .++++|||||++.+|+++
T Consensus        10 ~~~~~LPpGfRF~PTDeELV~~YL~~K~~g~~~~~--~~I~evDvy~~~Pw~Lp~~~~----~g~~ewYFFs~r~~ky~~   83 (174)
T 3ulx_A           10 EAELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPV--PIIAEVDLYKFDPWDLPERAL----FGAREWYFFTPRDRKYPN   83 (174)
T ss_dssp             CSTTTCCTTCCCCCCHHHHHHHTHHHHHHTCCCSS--SCCEECCGGGSCGGGSGGGCS----SCSSEEEEEEECCC----
T ss_pred             ccccCCCCcceeCCCHHHHHHHHHHHHhcCCCCCc--CeeeecccccCCchhhhhhhc----cCCceEEEEeccccccCC
Confidence            46679999999999999999999999999999998  899999999999999998632    246799999999999999


Q ss_pred             CCcccceecCCCceEeeccCCceEEeCCCceEEEEEEEEEEEeC
Q 038876           83 GSRIDRKVGSSGGTWQGEDAGKDIVSGQSKIKIGSKKRFRYEKQ  126 (127)
Q Consensus        83 g~R~~R~~g~~~G~W~~~g~~~~I~~~~~~~~iG~kk~l~f~~~  126 (127)
                      |.|++|++  ++|+||++|++++|.+.  |.+||+||+|+||..
T Consensus        84 g~R~nR~t--~~G~WkatG~dk~I~~~--g~~vG~KktLvFy~g  123 (174)
T 3ulx_A           84 GSRPNRAA--GNGYWKATGADKPVAPR--GRTLGIKKALVFYAG  123 (174)
T ss_dssp             -CCSCEEE--TTEEEEECSCCEEECCS--SSCCEEEEEEEEEES
T ss_pred             CCCceeec--CCceEccCCCCcEEeeC--CcEEEEEEEEEEecC
Confidence            99999998  58999999999999864  689999999999963

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=8e-44  Score=260.56  Aligned_cols=112  Identities=30%  Similarity=0.541  Sum_probs=96.3

Q ss_pred             CCCCCCCeeECCChHHHHHHHHHhhhcCCCCCcccCccccccCCCCCCccccccCCCCccCCCCcEEEEeccccccCCCC
Q 038876            5 RPFLPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIWDSHGGPFLNADEDLYFFTHLKKKFSKGS   84 (127)
Q Consensus         5 ~~~lp~G~rF~PTDeELi~~YL~~K~~g~~lp~~~~~I~~~Dvy~~~P~~L~~~~~~~~~~~~~~wyFF~~~~~k~~~g~   84 (127)
                      .+.|||||||+|||||||.|||++|+.|.++|.  .+|+++|||.+|||+||....    .++++|||||++.+++++|.
T Consensus        14 ~~~lPpGfRF~PTDeELv~~YL~~K~~g~~~~~--~~I~e~Diy~~~Pw~Lp~~~~----~g~~ewyFFs~r~~k~~~g~   87 (171)
T 1ut7_A           14 QLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSL--QLIAEIDLYKFDPWVLPNKAL----FGEKEWYFFSPRDRKYPNGS   87 (171)
T ss_dssp             SSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSS--CCSEECCGGGSCGGGHHHHSS----SCSSEEEEEEECCC------
T ss_pred             ccCCCCcceeCCChHHHHHHHHHHHhcCCCCCC--CeEeecccccCChhHhhchhh----cCCccEEEEeccccccCCCC
Confidence            578999999999999999999999999999997  899999999999999998632    25789999999999999999


Q ss_pred             cccceecCCCceEeeccCCceEEeCCCceEEEEEEEEEEEeC
Q 038876           85 RIDRKVGSSGGTWQGEDAGKDIVSGQSKIKIGSKKRFRYEKQ  126 (127)
Q Consensus        85 R~~R~~g~~~G~W~~~g~~~~I~~~~~~~~iG~kk~l~f~~~  126 (127)
                      |++|++  ++|+||++|++++|.+.  +.+||+||+|+||..
T Consensus        88 R~~R~t--~~G~Wk~tG~~k~I~~~--~~~vG~KktLvFy~g  125 (171)
T 1ut7_A           88 RPNRVA--GSGYWKATGTDKIISTE--GQRVGIKKALVFYIG  125 (171)
T ss_dssp             -CCEEE--TTEEEEEEEEEEEEEET--TEEEEEEEEEEEEES
T ss_pred             cccccC--CCCEEeccCCCceEEec--CcEEEEEEEEEEEcC
Confidence            999998  58999999999999975  589999999999973

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	127
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	5e-20

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 78.1 bits (192), Expect = 5e-20
 Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 14/129 (10%)

Query: 1   MQEHRPF----LPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIW 56
           +QE  P     LP GF+F P+DEEL+  YL +K +G     +   I + +LY+  P  + 
Sbjct: 6   IQETDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAG--YDFSLQLIAEIDLYKFDPWVLP 63

Query: 57  DSHGGPFLNADEDLYFFTHLKKKFSKGSRIDRKVGSSGGTWQGEDAGKDIVSGQSKIKIG 116
                  L  +++ YFF+   +K+  GSR +R  G   G W+     K I +     ++G
Sbjct: 64  ----NKALFGEKEWYFFSPRDRKYPNGSRPNRVAG--SGYWKATGTDKIISTE--GQRVG 115

Query: 117 SKKRFRYEK 125
            KK   +  
Sbjct: 116 IKKALVFYI 124

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	127
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=5.1e-43  Score=253.30  Aligned_cols=113  Identities=30%  Similarity=0.536  Sum_probs=96.1

Q ss_pred             CCCCCCCCeeECCChHHHHHHHHHhhhcCCCCCcccCccccccCCCCCCccccccCCCCccCCCCcEEEEeccccccCCC
Q 038876            4 HRPFLPHGFQFRPSDEELIEHYLKKKDSGIFIPLAEYFIRDCNLYQEKPSEIWDSHGGPFLNADEDLYFFTHLKKKFSKG   83 (127)
Q Consensus         4 ~~~~lp~G~rF~PTDeELi~~YL~~K~~g~~lp~~~~~I~~~Dvy~~~P~~L~~~~~~~~~~~~~~wyFF~~~~~k~~~g   83 (127)
                      .++.|||||||+|||||||.+||++|+.|.++|.  ++|+++|||++|||+||+.+.    .++++|||||+++++++++
T Consensus        13 ~~l~LPpG~RF~PTDeELv~~YL~~Ki~g~~l~~--~~I~~~Dvy~~~Pw~Lp~~~~----~~~~~wyFft~~~~k~~~g   86 (166)
T d1ut7a_          13 TQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSL--QLIAEIDLYKFDPWVLPNKAL----FGEKEWYFFSPRDRKYPNG   86 (166)
T ss_dssp             CSSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSS--CCSEECCGGGSCGGGHHHHSS----SCSSEEEEEEECCC-----
T ss_pred             ccccCCCccccCCCcHHHHHHHHHHHHcCCCCCc--ccceeccCCcCChhhccchhc----cCcceEEEEeeeccccCCC
Confidence            5689999999999999999999999999999998  899999999999999998632    3577899999999999999


Q ss_pred             CcccceecCCCceEeeccCCceEEeCCCceEEEEEEEEEEEeC
Q 038876           84 SRIDRKVGSSGGTWQGEDAGKDIVSGQSKIKIGSKKRFRYEKQ  126 (127)
Q Consensus        84 ~R~~R~~g~~~G~W~~~g~~~~I~~~~~~~~iG~kk~l~f~~~  126 (127)
                      .|.+|++  ++|+||++|++++|.++  |.+||+|++|+||..
T Consensus        87 ~r~~R~~--g~G~Wk~~g~~~~i~~~--g~~vG~kk~l~fy~~  125 (166)
T d1ut7a_          87 SRPNRVA--GSGYWKATGTDKIISTE--GQRVGIKKALVFYIG  125 (166)
T ss_dssp             --CCEEE--TTEEEEEEEEEEEEEET--TEEEEEEEEEEEEES
T ss_pred             Ccccccc--CCCEecccCCCceEecC--CcEEEEEEEEEEEec
Confidence            9999998  58999999999988864  689999999999963