Citrus Sinensis ID: 038982

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280--
MSISSSSLLLLFSVSICCFVVTSKGDFNTDTKITWGDGRAKITEGGKALTLSIDKKLGSGFQSKKDYLFARFDVEMKLIPGNAAGLVTTFYLSSLEGSHDEVDMEFLGNVTGEPYTLHTNIYAQGEGHRERGFHLWFDPSAKFHQYSIVWNPERIIFMVDNKAVRVHENLANLGVPFPAKQPMWLIASLWNGDQWATQKGRIKANWTDAPYTAHYRNLVITKYAGNNQTLTNLDEKNIRSVQDKFMIYDYCDYGVHPLECEKQNSQANEKPKNSNSGPAPKN
cccHHHHHHHHHHHHHHHcccccccccccccccccccccEEEEccccEEEEEEcccccccEEEccEEEEEEEEEEEEEccccccEEEEEEEEEccccccccEEEEEEcccccccEEEEEEEEEcccccEEEEEEEccccccccEEEEEEEEccEEEEEEccEEEEEEEccccccccccccccEEEEEEEEccccccccccEEEEccccccEEEEEEEEEEEEcccccccccHHHHHHHHHHHHccEEEcccccccccccccccccccccccccccccccccc
cHHHHHHHHHHHHHHHHHHHHccccccccccEEEEccccEEEEccccEEEEEEEccccccccccccEEEEEEEEEEEEcccccccEEEEEEEccccccccEEEEEEccccccccEEEEEEEEEcccccccEEEEEEEcccccccEEEEEEcccEEEEEEccccEEEEcccHHcccccccccccEEEEEEcccccHccccccEEcccccccEEEEEEcccccccccccHcccHHHHHHHHHHHHccEEEEccccccccccccccccHHccccccccccccccc
msisssslLLLFSVSICCFvvtskgdfntdtkitwgdgrakitEGGKALTLSIDKklgsgfqskkDYLFARFDVEMklipgnaagLVTTFYLSSlegshdevdmeflgnvtgepytlhtniyaqgeghrergfhlwfdpsakfhqysivwnPERIIFMVDNKAVRVHENlanlgvpfpakqpMWLIASLWNGDQWATQKgrikanwtdapytahyRNLVITKyagnnqtltnldeknirsVQDKFMiydycdygvhplecekqnsqanekpknsnsgpapkn
MSISSSSLLLLFSVSICCFVVtskgdfntdtkitwgdgrakITEGGKALTLsidkklgsgfqSKKDYLFARFDVEMKLIPGNAAGLVTTFYLSSLEGSHDEVDMEFLGNVTGEPYTLHTNIYAQGEGHRERGFHLWFDPSAKFHQYSIVWNPERIIFMVDNKAVRVHENLANLGVPFPAKQPMWLIASLWNGDQWATQKGRIKANWTDAPYTAHYRNLVITKYagnnqtltnldekniRSVQDKFMIYDYCDYGVHPLECEKqnsqanekpknsnsgpapkn
MsissssllllfsvsiccfVVTSKGDFNTDTKITWGDGRAKITEGGKALTLSIDKKLGSGFQSKKDYLFARFDVEMKLIPGNAAGLVTTFYLSSLEGSHDEVDMEFLGNVTGEPYTLHTNIYAQGEGHRERGFHLWFDPSAKFHQYSIVWNPERIIFMVDNKAVRVHENLANLGVPFPAKQPMWLIASLWNGDQWATQKGRIKANWTDAPYTAHYRNLVITKYAGNNQTLTNLDEKNIRSVQDKFMIYDYCDYGVHPLECEKQNSQANEKPKNSNSGPAPKN
*******LLLLFSVSICCFVVTSKGDFNTDTKITWGDGRAKITEGGKALTLSIDKKLGSGFQSKKDYLFARFDVEMKLIPGNAAGLVTTFYLSSLEGSHDEVDMEFLGNVTGEPYTLHTNIYAQGEGHRERGFHLWFDPSAKFHQYSIVWNPERIIFMVDNKAVRVHENLANLGVPFPAKQPMWLIASLWNGDQWATQKGRIKANWTDAPYTAHYRNLVITKYAGNNQTLTNLDEKNIRSVQDKFMIYDYCDYGVHPLEC**********************
*****SS*LLLFSVSICCFVVTSKGDFNTDTKITWGDGRAKITEGGKALTLSIDKKLGSGFQSKKDYLFARFDVEMKLIPGNAAGLVTTFYLSSLEGSHDEVDMEFLGNVTGEPYTLHTNIYAQGEGHRERGFHLWFDPSAKFHQYSIVWNPERIIFMVDNKAVRVHENLANLGVPFPAKQPMWLIASLWNGDQWATQKGRIKANWTDAPYTAHYRNLVITKYAGNNQ**********RSVQDKFMIYDYCDYGVHPLE***********************
MSISSSSLLLLFSVSICCFVVTSKGDFNTDTKITWGDGRAKITEGGKALTLSIDKKLGSGFQSKKDYLFARFDVEMKLIPGNAAGLVTTFYLSSLEGSHDEVDMEFLGNVTGEPYTLHTNIYAQGEGHRERGFHLWFDPSAKFHQYSIVWNPERIIFMVDNKAVRVHENLANLGVPFPAKQPMWLIASLWNGDQWATQKGRIKANWTDAPYTAHYRNLVITKYAGNNQTLTNLDEKNIRSVQDKFMIYDYCDYGVHPLECEKQ*******************
MSISSSSLLLLFSVSICCFVVTSKGDFNTDTKITWGDGRAKITEGGKALTLSIDKKLGSGFQSKKDYLFARFDVEMKLIPGNAAGLVTTFYLSSLEGSHDEVDMEFLGNVTGEPYTLHTNIYAQGEGHRERGFHLWFDPSAKFHQYSIVWNPERIIFMVDNKAVRVHENLANLGVPFPAKQPMWLIASLWNGDQWATQKGRIKANWTDAPYTAHYRNLVITKYAGNNQTLTNLDEKNIRSVQDKFMIYDYCDYGVHPLEC**********************
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MSISSSSLLLLFSVSICCFVVTSKGDFNTDTKITWGDGRAKITEGGKALTLSIDKKLGSGFQSKKDYLFARFDVEMKLIPGNAAGLVTTFYLSSLEGSHDEVDMEFLGNVTGEPYTLHTNIYAQGEGHRERGFHLWFDPSAKFHQYSIVWNPERIIFMVDNKAVRVHENLANLGVPFPAKQPMWLIASLWNGDQWATQKGRIKANWTDAPYTAHYRNLVITKYAGNNQTLTNLDEKNIRSVQDKFMIYDYCDYGVHPLECEKQNSQANEKPKNSNSGPAPKN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query282 2.2.26 [Sep-21-2011]
P24806269 Xyloglucan endotransgluco yes no 0.904 0.947 0.490 3e-74
P35694283 Brassinosteroid-regulated no no 0.900 0.897 0.485 7e-74
Q38907284 Probable xyloglucan endot no no 0.890 0.883 0.485 2e-73
Q8LG58291 Probable xyloglucan endot no no 0.911 0.883 0.463 9e-71
Q38911289 Probable xyloglucan endot no no 0.914 0.892 0.466 3e-69
Q38910286 Probable xyloglucan endot no no 0.875 0.863 0.459 4e-68
Q38857284 Xyloglucan endotransgluco no no 0.858 0.852 0.473 4e-68
Q9ZV40305 Probable xyloglucan endot no no 0.918 0.849 0.432 5e-67
Q9FI31282 Xyloglucan endotransgluco no no 0.804 0.804 0.481 4e-65
Q9FKL8284 Putative xyloglucan endot no no 0.804 0.799 0.483 5e-65
>sp|P24806|XTH24_ARATH Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana GN=XTH24 PE=1 SV=2 Back     alignment and function desciption
 Score =  278 bits (711), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 127/259 (49%), Positives = 175/259 (67%), Gaps = 4/259 (1%)

Query: 9   LLLFSVSICCFVVTSKGDFNTDTKITWGDGRAKITEGGKALTLSIDKKLGSGFQSKKDYL 68
           +  F+  +      S  DFNTD  + WG+GR KI   G+ LTLS+DK  GSGFQSK +YL
Sbjct: 6   IFFFTTLLVAAFSVSAADFNTDVNVAWGNGRGKILNNGQLLTLSLDKSSGSGFQSKTEYL 65

Query: 69  FARFDVEMKLIPGNAAGLVTTFYLSSLEGSHDEVDMEFLGNVTGEPYTLHTNIYAQGEGH 128
           F + D+++KL+PGN+AG VTTFYL S   + DE+D EFLGN++G+PYTLHTN+Y QG+G 
Sbjct: 66  FGKIDMQIKLVPGNSAGTVTTFYLKSEGSTWDEIDFEFLGNMSGDPYTLHTNVYTQGKGD 125

Query: 129 RERGFHLWFDPSAKFHQYSIVWNPERIIFMVDNKAVRVHENLANLGVPFPAKQPMWLIAS 188
           +E+ FHLWFDP+A FH YSI+WNP+RII  VD+  +R  +N  +LGV FP  +PM + AS
Sbjct: 126 KEQQFHLWFDPTANFHTYSILWNPQRIILTVDDTPIREFKNYESLGVLFPKNKPMRMYAS 185

Query: 189 LWNGDQWATQKGRIKANWTDAPYTAHYRNLVITKYAGNN---QTLTNLDEKNIRSVQDKF 245
           LWN D WAT+ G +K +W+ AP+ A YRN+ I     +N   Q + +  +  ++ VQ  +
Sbjct: 186 LWNADDWATRGGLVKTDWSKAPFMASYRNIKIDSKPNSNWYTQEMDSTSQARLKWVQKNY 245

Query: 246 MIYDYC-DYGVHPLECEKQ 263
           MIY+YC D+   P    K+
Sbjct: 246 MIYNYCTDHRRFPQGAPKE 264
Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. May be required during development to modify the walls of cells under mechanical stress.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 0EC: 7
>sp|P35694|BRU1_SOYBN Brassinosteroid-regulated protein BRU1 OS=Glycine max PE=2 SV=1 Back     alignment and function description
>sp|Q38907|XTH25_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana GN=XTH25 PE=2 SV=2 Back     alignment and function description
>sp|Q8LG58|XTH16_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 16 OS=Arabidopsis thaliana GN=XTH16 PE=2 SV=2 Back     alignment and function description
>sp|Q38911|XTH15_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 15 OS=Arabidopsis thaliana GN=XTH15 PE=1 SV=1 Back     alignment and function description
>sp|Q38910|XTH23_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis thaliana GN=XTH23 PE=2 SV=1 Back     alignment and function description
>sp|Q38857|XTH22_ARATH Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana GN=XTH22 PE=1 SV=1 Back     alignment and function description
>sp|Q9ZV40|XTH21_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis thaliana GN=XTH21 PE=2 SV=1 Back     alignment and function description
>sp|Q9FI31|XTH20_ARATH Xyloglucan endotransglucosylase/hydrolase protein 20 OS=Arabidopsis thaliana GN=XTH20 PE=2 SV=1 Back     alignment and function description
>sp|Q9FKL8|XTH13_ARATH Putative xyloglucan endotransglucosylase/hydrolase protein 13 OS=Arabidopsis thaliana GN=XTH13 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query282
187372966294 xyloglucan endotransglucosylase/hydrolas 0.925 0.887 0.503 3e-79
224116472274 predicted protein [Populus trichocarpa] 0.868 0.894 0.557 1e-77
115334950290 xyloglucan endotransglucosylase/hydrolas 0.904 0.879 0.503 6e-76
449515657291 PREDICTED: brassinosteroid-regulated pro 0.904 0.876 0.503 1e-75
255558726287 Brassinosteroid-regulated protein BRU1 p 0.914 0.898 0.503 2e-75
449444981291 PREDICTED: brassinosteroid-regulated pro 0.904 0.876 0.5 2e-75
449515653286 PREDICTED: brassinosteroid-regulated pro 0.897 0.884 0.505 2e-75
1890577286 xyloglucan endotransglycosylase (XET) [H 0.875 0.863 0.498 2e-75
224116476292 predicted protein [Populus trichocarpa] 0.907 0.876 0.498 2e-75
449515651280 PREDICTED: brassinosteroid-regulated pro 0.897 0.903 0.508 2e-75
>gi|187372966|gb|ACD03217.1| xyloglucan endotransglucosylase/hydrolase 7 [Actinidia deliciosa] Back     alignment and taxonomy information
 Score =  301 bits (770), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 145/288 (50%), Positives = 191/288 (66%), Gaps = 27/288 (9%)

Query: 1   MSISSSSLLLLFSVSICCFVVTSKGDFNTDTKITWGDGRAKITEGGKALTLSIDKKLGSG 60
           +S S +S +L+  + + C V +S G F  D +ITWG+GR KI  GG+ LTLS+D   GSG
Sbjct: 4   LSSSRASKMLMLVMLMSCLVSSSYGSFE-DVEITWGNGRGKILNGGQLLTLSLDNYSGSG 62

Query: 61  FQSKKDYLFARFDVEMKLIPGNAAGLVTTFYLSSLEGSHDEVDMEFLGNVTGEPYTLHTN 120
           FQSK +YLF R D+++KL+PGN+AG VTT+YLSS   +HDE+D EFLGNV+G+PYT+HTN
Sbjct: 63  FQSKNEYLFGRIDMQLKLVPGNSAGTVTTYYLSSQGATHDEIDFEFLGNVSGQPYTVHTN 122

Query: 121 IYAQGEGHRERGFHLWFDPSAKFHQYSIVWNPERIIFMVDNKAVRVHENLANLGVPFPAK 180
           ++AQG+G+RE+ FHLWFDP+  FH Y+I+WNP+RIIF+VDN  +RV  N   +GVPFP  
Sbjct: 123 VFAQGKGNREQQFHLWFDPTTSFHTYTILWNPQRIIFLVDNIPIRVFNNNEAIGVPFPTS 182

Query: 181 QPMWLIASLWNGDQWATQKGRIKANWTDAPYTAHYRNL----------------VITKYA 224
           QPM + +S WN D WATQ GR+K +WT AP+TA Y+N                   TK  
Sbjct: 183 QPMRVYSSFWNADDWATQGGRVKTDWTHAPFTASYKNFNANACVHSSGSSSCGSQSTKSI 242

Query: 225 GNNQTLTNLD-----EKNIRSVQDKFMIYDYCDYGVH-----PLECEK 262
            N+Q     D      K +R VQ KFMIY+YC          PLEC++
Sbjct: 243 SNDQAWQTQDLDANGRKRLRWVQQKFMIYNYCTDTQRFPQGLPLECKR 290

Source: Actinidia deliciosa

Species: Actinidia deliciosa

Genus: Actinidia

Family: Actinidiaceae

Order: Ericales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224116472|ref|XP_002317309.1| predicted protein [Populus trichocarpa] gi|222860374|gb|EEE97921.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|115334950|gb|ABI94061.1| xyloglucan endotransglucosylase/hydrolase 1 [Cucumis melo] Back     alignment and taxonomy information
>gi|449515657|ref|XP_004164865.1| PREDICTED: brassinosteroid-regulated protein BRU1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|255558726|ref|XP_002520387.1| Brassinosteroid-regulated protein BRU1 precursor, putative [Ricinus communis] gi|223540434|gb|EEF42003.1| Brassinosteroid-regulated protein BRU1 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449444981|ref|XP_004140252.1| PREDICTED: brassinosteroid-regulated protein BRU1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449515653|ref|XP_004164863.1| PREDICTED: brassinosteroid-regulated protein BRU1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|1890577|emb|CAA63663.1| xyloglucan endotransglycosylase (XET) [Hordeum vulgare subsp. vulgare] gi|326501270|dbj|BAJ98866.1| predicted protein [Hordeum vulgare subsp. vulgare] Back     alignment and taxonomy information
>gi|224116476|ref|XP_002317310.1| predicted protein [Populus trichocarpa] gi|222860375|gb|EEE97922.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449515651|ref|XP_004164862.1| PREDICTED: brassinosteroid-regulated protein BRU1-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query282
TAIR|locus:2128936269 XTH24 "xyloglucan endotransglu 0.851 0.892 0.524 7e-70
TAIR|locus:2095168291 XTH16 "xyloglucan endotransglu 0.680 0.659 0.583 1.1e-68
TAIR|locus:2174597284 XTH25 "xyloglucan endotransglu 0.804 0.799 0.518 1.9e-67
TAIR|locus:2129445289 XTH15 "xyloglucan endotransglu 0.677 0.660 0.575 1.4e-66
TAIR|locus:2174497284 TCH4 "Touch 4" [Arabidopsis th 0.698 0.693 0.552 1.3e-65
TAIR|locus:2053967305 XTH21 "xyloglucan endotransglu 0.698 0.645 0.545 3.3e-65
TAIR|locus:2117567286 XTR6 "xyloglucan endotransglyc 0.698 0.688 0.532 6.8e-65
TAIR|locus:2118751277 XTH19 "xyloglucan endotransglu 0.804 0.819 0.514 8.5e-65
TAIR|locus:2118746282 XTH18 "xyloglucan endotransglu 0.808 0.808 0.495 9.7e-64
TAIR|locus:2206335282 XTH17 "xyloglucan endotransglu 0.804 0.804 0.502 3.3e-63
TAIR|locus:2128936 XTH24 "xyloglucan endotransglucosylase/hydrolase 24" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 708 (254.3 bits), Expect = 7.0e-70, P = 7.0e-70
 Identities = 129/246 (52%), Positives = 173/246 (70%)

Query:    23 SKGDFNTDTKITWGDGRAKITEGGKALTLSIDKKLGSGFQSKKDYLFARFDVEMKLIPGN 82
             S  DFNTD  + WG+GR KI   G+ LTLS+DK  GSGFQSK +YLF + D+++KL+PGN
Sbjct:    20 SAADFNTDVNVAWGNGRGKILNNGQLLTLSLDKSSGSGFQSKTEYLFGKIDMQIKLVPGN 79

Query:    83 AAGLVTTFYLSSLEGSH-DEVDMEFLGNVTGEPYTLHTNIYAQGEGHRERGFHLWFDPSA 141
             +AG VTTFYL S EGS  DE+D EFLGN++G+PYTLHTN+Y QG+G +E+ FHLWFDP+A
Sbjct:    80 SAGTVTTFYLKS-EGSTWDEIDFEFLGNMSGDPYTLHTNVYTQGKGDKEQQFHLWFDPTA 138

Query:   142 KFHQYSIVWNPERIIFMVDNKAVRVHENLANLGVPFPAKQPMWLIASLWNGDQWATQKGR 201
              FH YSI+WNP+RII  VD+  +R  +N  +LGV FP  +PM + ASLWN D WAT+ G 
Sbjct:   139 NFHTYSILWNPQRIILTVDDTPIREFKNYESLGVLFPKNKPMRMYASLWNADDWATRGGL 198

Query:   202 IKANWTDAPYTAHYRNLVITKYAGNN---QTLTNLDEKNIRSVQDKFMIYDYC-DYGVHP 257
             +K +W+ AP+ A YRN+ I     +N   Q + +  +  ++ VQ  +MIY+YC D+   P
Sbjct:   199 VKTDWSKAPFMASYRNIKIDSKPNSNWYTQEMDSTSQARLKWVQKNYMIYNYCTDHRRFP 258

Query:   258 LECEKQ 263
                 K+
Sbjct:   259 QGAPKE 264
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0005618 "cell wall" evidence=IEA;IDA
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0006073 "cellular glucan metabolic process" evidence=IEA
GO:0009739 "response to gibberellin stimulus" evidence=IGI
GO:0009740 "gibberellic acid mediated signaling pathway" evidence=TAS
GO:0009741 "response to brassinosteroid stimulus" evidence=IGI
GO:0016762 "xyloglucan:xyloglucosyl transferase activity" evidence=IEA;IDA;TAS
GO:0016798 "hydrolase activity, acting on glycosyl bonds" evidence=ISS
GO:0048046 "apoplast" evidence=IEA
GO:0009828 "plant-type cell wall loosening" evidence=TAS
GO:0005737 "cytoplasm" evidence=IDA
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0007568 "aging" evidence=IEP
TAIR|locus:2095168 XTH16 "xyloglucan endotransglucosylase/hydrolase 16" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2174597 XTH25 "xyloglucan endotransglucosylase/hydrolase 25" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2129445 XTH15 "xyloglucan endotransglucosylase/hydrolase 15" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2174497 TCH4 "Touch 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2053967 XTH21 "xyloglucan endotransglucosylase/hydrolase 21" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2117567 XTR6 "xyloglucan endotransglycosylase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2118751 XTH19 "xyloglucan endotransglucosylase/hydrolase 19" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2118746 XTH18 "xyloglucan endotransglucosylase/hydrolase 18" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2206335 XTH17 "xyloglucan endotransglucosylase/hydrolase 17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P24806XTH24_ARATH2, ., 4, ., 1, ., 2, 0, 70.49030.90420.9479yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!
4th Layer2.4.1.207LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.XI.2636.1
hypothetical protein (252 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query282
cd02176263 cd02176, GH16_XET, Xyloglucan endotransglycosylase 1e-120
PLN03161291 PLN03161, PLN03161, Probable xyloglucan endotransg 5e-82
pfam00722174 pfam00722, Glyco_hydro_16, Glycosyl hydrolases fam 2e-67
cd02175212 cd02175, GH16_lichenase, lichenase, member of glyc 3e-28
cd02183203 cd02183, GH16_fungal_CRH1_transglycosylase, glycos 3e-25
cd00413210 cd00413, Glyco_hydrolase_16, glycosyl hydrolase fa 8e-23
COG2273355 COG2273, SKN1, Beta-glucanase/Beta-glucan syntheta 2e-09
cd08023235 cd08023, GH16_laminarinase_like, Laminarinase, mem 6e-09
pfam0695551 pfam06955, XET_C, Xyloglucan endo-transglycosylase 5e-04
>gnl|CDD|185685 cd02176, GH16_XET, Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16 Back     alignment and domain information 
 Score =  344 bits (884), Expect = e-120
 Identities = 116/263 (44%), Positives = 162/263 (61%), Gaps = 24/263 (9%)

Query: 22  TSKGDFNTDTKITWGDGRAKITEGGKALTLSIDKKLGSGFQSKKDYLFARFDVEMKLIPG 81
                F+ +  +TWG    +++  G ++ L++D+  GSGF+SK  YLF  F + +KL PG
Sbjct: 1   AVAASFDENFFVTWGPDHIRVSNDGTSVQLTLDQSSGSGFKSKNKYLFGFFSMRIKLPPG 60

Query: 82  NAAGLVTTFYLSSL-EGSHDEVDMEFLGNVTGEPYTLHTNIYAQGEGHRERGFHLWFDPS 140
           ++AG VT FYLSS    +HDE+D EFLGNVTG+PYTL TN++A G G RE+  +LWFDP+
Sbjct: 61  DSAGTVTAFYLSSQGPDNHDEIDFEFLGNVTGQPYTLQTNVFANGVGGREQRIYLWFDPT 120

Query: 141 AKFHQYSIVWNPERIIFMVDNKAVRVHENLANLGVPFPAKQPMWLIASLWNGDQWATQKG 200
           A FH YSI+WNP +I+F VD+  +RV +N   LGVP+P+ QPM + AS+W+G  WATQ G
Sbjct: 121 ADFHTYSILWNPHQIVFYVDDVPIRVFKNNEALGVPYPSSQPMGVYASIWDGSDWATQGG 180

Query: 201 RIKANWTDAPYTAHYRNLVI----------------TKYAGNNQTLTNLDEKNIRS---V 241
           R+K +W+ AP+ A YR+  +                T+   N  T   L     R+   V
Sbjct: 181 RVKIDWSYAPFVASYRDFKLDGCVVDPGDSFSSCSCTEDWWNGSTYQQLSANQQRAMEWV 240

Query: 242 QDKFMIYDYCD----YGVHPLEC 260
           +  +M+YDYCD    Y V P EC
Sbjct: 241 RRNYMVYDYCDDRKRYPVPPPEC 263

Xyloglucan endotransglycosylases (XETs) cleave and religate xyloglucan polymers in plant cell walls via a transglycosylation mechanism. Xyloglucan is a soluble hemicellulose with a backbone of beta-1,4-linked glucose units, partially substituted with alpha-1,6-linked xylopyranose branches. It binds noncovalently to cellulose, cross-linking the adjacent cellulose microfibrils, giving it a key structural role as a matrix polymer. Therefore, XET plays an important role in all plant processes that require cell wall remodeling. Length = 263
>gnl|CDD|178706 PLN03161, PLN03161, Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional Back     alignment and domain information
>gnl|CDD|216081 pfam00722, Glyco_hydro_16, Glycosyl hydrolases family 16 Back     alignment and domain information
>gnl|CDD|185684 cd02175, GH16_lichenase, lichenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|185692 cd02183, GH16_fungal_CRH1_transglycosylase, glycosylphosphatidylinositol-glucanosyltransferase Back     alignment and domain information
>gnl|CDD|185683 cd00413, Glyco_hydrolase_16, glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|225182 COG2273, SKN1, Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|185693 cd08023, GH16_laminarinase_like, Laminarinase, member of the glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|219239 pfam06955, XET_C, Xyloglucan endo-transglycosylase (XET) C-terminus Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 282
PLN03161291 Probable xyloglucan endotransglucosylase/hydrolase 100.0
cd02176263 GH16_XET Xyloglucan endotransglycosylase, member o 100.0
cd02183203 GH16_fungal_CRH1_transglycosylase glycosylphosphat 100.0
cd02175212 GH16_lichenase lichenase, member of glycosyl hydro 100.0
PF00722185 Glyco_hydro_16: Glycosyl hydrolases family 16; Int 100.0
cd00413210 Glyco_hydrolase_16 glycosyl hydrolase family 16. T 100.0
cd02178258 GH16_beta_agarase Beta-agarase, member of glycosyl 100.0
cd08023235 GH16_laminarinase_like Laminarinase, member of the 100.0
cd02177269 GH16_kappa_carrageenase Kappa-carrageenase, member 99.96
cd02182259 GH16_Strep_laminarinase_like Streptomyces laminari 99.96
cd02180295 GH16_fungal_KRE6_glucanase Saccharomyces cerevisia 99.96
cd08024330 GH16_CCF Coelomic cytolytic factor, member of glyc 99.95
cd02179321 GH16_beta_GRP beta-1,3-glucan recognition protein, 99.94
COG2273355 SKN1 Beta-glucanase/Beta-glucan synthetase [Carboh 99.92
PF03935504 SKN1: Beta-glucan synthesis-associated protein (SK 99.55
cd02181293 GH16_fungal_Lam16A_glucanase fungal 1,3(4)-beta-D- 99.54
PF0695551 XET_C: Xyloglucan endo-transglycosylase (XET) C-te 99.4
PF13385157 Laminin_G_3: Concanavalin A-like lectin/glucanases 96.15
PF09264198 Sial-lect-inser: Vibrio cholerae sialidase, lectin 93.9
cd00152201 PTX Pentraxins are plasma proteins characterized b 92.89
smart00159206 PTX Pentraxin / C-reactive protein / pentaxin fami 92.47
smart00560133 LamGL LamG-like jellyroll fold domain. 91.72
smart00210184 TSPN Thrombospondin N-terminal -like domains. Hepa 88.76
PF02973190 Sialidase: Sialidase, N-terminal domain; InterPro: 86.09
cd00110151 LamG Laminin G domain; Laminin G-like domains are 85.61
PF10287235 DUF2401: Putative TOS1-like glycosyl hydrolase (DU 85.32
PF06439185 DUF1080: Domain of Unknown Function (DUF1080); Int 83.98
>PLN03161 Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=3.2e-77  Score=548.23  Aligned_cols=240  Identities=46%  Similarity=0.898  Sum_probs=226.4

Q ss_pred             ccccccCCeeeecCCCeEEeeCCcEEEEEEecCCCceEEEceeeEEEEEEEEEEecCCCCCceEEEEEEeeCCCCCCeee
Q 038982           24 KGDFNTDTKITWGDGRAKITEGGKALTLSIDKKLGSGFQSKKDYLFARFDVEMKLIPGNAAGLVTTFYLSSLEGSHDEVD  103 (282)
Q Consensus        24 ~~~f~~~f~~~w~~~nv~~~~~g~~l~L~ld~~sGsgi~Sk~~~~yG~~eariKlp~g~s~G~v~AFwl~~~~p~~~EID  103 (282)
                      +.+|.++|.++|+.+|+++.++|+.|+|+||+.+|++|+||+.|+||+||+|||+|+|+++|+||||||++.++.+||||
T Consensus        24 ~~~f~~~~~~~w~~~~~~~~~~g~~l~L~ld~~sgs~~~Sk~~f~yGr~E~riKLp~G~saG~v~AFwl~s~~~~~dEID  103 (291)
T PLN03161         24 EADFSKSMYFTWGADHSSMLGNGDNLQLVLDQSSGSGIKSKRAFLFGSIEMLIKLVPGNSAGTVTAYYLSSTGSRHDEID  103 (291)
T ss_pred             cccccccceeeEcCCcEEEeCCCCEEEEEEeCCccCcEEecceEEEEEEEEEEEeCCCCCCCeEEEEEecCCCCCCCeEE
Confidence            56799999999999999998888889999999999999999999999999999999988899999999999777899999


Q ss_pred             EeeeCCCCCCCcEEEeeEeeCCCCCceeeeecCCCCCCCcEEEEEEEccCeEEEEEcCeEEEEEecccCCCCCCCCCCCe
Q 038982          104 MEFLGNVTGEPYTLHTNIYAQGEGHRERGFHLWFDPSAKFHQYSIVWNPERIIFMVDNKAVRVHENLANLGVPFPAKQPM  183 (282)
Q Consensus       104 ~E~lG~~~G~p~~~~TNv~~~g~g~~e~~~~l~fdp~~dfHtY~i~Wtp~~I~fyVDG~~vr~~~~~~~~g~~~P~~~Pm  183 (282)
                      |||||+.+|+++++|||+|.+|.++++++++++||++++||+|+|+|+|++|+|||||++||++++.+..|.+||+++||
T Consensus       104 iEfLG~~~g~~~~vqtN~y~~g~g~re~~~~l~fDpt~dFHtYsI~Wtp~~I~wyVDG~~iRt~~~~~~~g~~yP~~~pM  183 (291)
T PLN03161        104 FEFLGNVSGQPYTIHTNIYTQGNGSREQQFRPWFDPTADFHNYTIHWNPSEVVWYVDGTPIRVFRNYENEGIAYPNKQGM  183 (291)
T ss_pred             EEecCCCCCCceEEEeceEeCCcCCcceeccccCCCccCcEEEEEEEchhhEEEEECCEEEEEEEcccccCCcCCCccce
Confidence            99999999999999999999999999999999999999999999999999999999999999999877778899998899


Q ss_pred             EEEEEeecCCCccCCCCccccCCCCCCeEEEEcEEEEeeee-----------------cCC----cCCCHHHHHHHHHHh
Q 038982          184 WLIASLWNGDQWATQKGRIKANWTDAPYTAHYRNLVITKYA-----------------GNN----QTLTNLDEKNIRSVQ  242 (282)
Q Consensus       184 ~l~~nlW~gg~Wat~GG~~~~d~~~~Pf~a~~~~~~v~~c~-----------------w~~----~~l~~~~~~~~~~~~  242 (282)
                      +|++|||+|++|||+||++||||+++||+|.|++|++++|.                 |++    ++|+++|+++|+|||
T Consensus       184 ~i~~siW~g~~wAt~gG~~kidw~~aPf~a~~~~f~~~~C~~~~~~~~~~c~~~~~~~~~~~~~~~~l~~~~~~~~~~v~  263 (291)
T PLN03161        184 RVYSSLWNADNWATQGGRVKIDWTLAPFVARGRRFRARACKWNGPVSIKQCADPTPSNWWTSPSYSQLTNAQLTQMKKVR  263 (291)
T ss_pred             EEEEeeecCCCcccCCCceeccCCcCCeeEEeeeEEEEeeccCCCCCccccCCCCccccccCccccCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999993                 222    369999999999999


Q ss_pred             ccCeEEccCC----CCCC-CCCcccC
Q 038982          243 DKFMIYDYCD----YGVH-PLECEKQ  263 (282)
Q Consensus       243 ~~~~~y~yc~----~~~~-~~ec~~~  263 (282)
                      +||||||||.    ||++ ||||.++
T Consensus       264 ~~~m~Y~YC~D~~R~~~~~p~EC~~~  289 (291)
T PLN03161        264 DNFMIYDYCKDTKRFNGVMPPECFKP  289 (291)
T ss_pred             hCcEEEeccCCCCcCCCCcCcccCCC
Confidence            9999999999    9984 9999764

>cd02176 GH16_XET Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02183 GH16_fungal_CRH1_transglycosylase glycosylphosphatidylinositol-glucanosyltransferase Back     alignment and domain information
>cd02175 GH16_lichenase lichenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>PF00722 Glyco_hydro_16: Glycosyl hydrolases family 16; InterPro: IPR000757 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd00413 Glyco_hydrolase_16 glycosyl hydrolase family 16 Back     alignment and domain information
>cd02178 GH16_beta_agarase Beta-agarase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd08023 GH16_laminarinase_like Laminarinase, member of the glycosyl hydrolase family 16 Back     alignment and domain information
>cd02177 GH16_kappa_carrageenase Kappa-carrageenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02182 GH16_Strep_laminarinase_like Streptomyces laminarinase-like, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02180 GH16_fungal_KRE6_glucanase Saccharomyces cerevisiae KRE6 and related glucanses, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd08024 GH16_CCF Coelomic cytolytic factor, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02179 GH16_beta_GRP beta-1,3-glucan recognition protein, member of glycosyl hydrolase family 16 Back     alignment and domain information
>COG2273 SKN1 Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF03935 SKN1: Beta-glucan synthesis-associated protein (SKN1); InterPro: IPR005629 This family consists of the beta-glucan synthesis-associated proteins KRE6 and SKN1 Back     alignment and domain information
>cd02181 GH16_fungal_Lam16A_glucanase fungal 1,3(4)-beta-D-glucanases, similar to Phanerochaete chrysosporium laminarinase 16A Back     alignment and domain information
>PF06955 XET_C: Xyloglucan endo-transglycosylase (XET) C-terminus; InterPro: IPR010713 This entry represents the C terminus (approximately 60 residues) of plant xyloglucan endo-transglycosylase (XET) Back     alignment and domain information
>PF13385 Laminin_G_3: Concanavalin A-like lectin/glucanases superfamily; PDB: 4DQA_A 1N1Y_A 1MZ6_A 1MZ5_A 1N1S_A 2A75_A 1WCS_A 1N1T_A 1N1V_A 2FHR_A Back     alignment and domain information
>PF09264 Sial-lect-inser: Vibrio cholerae sialidase, lectin insertion; InterPro: IPR015344 This domain is predominantly found in Vibrio cholerae sialidase, and adopt a beta sandwich structure consisting of 12-14 strands arranged in two beta-sheets Back     alignment and domain information
>cd00152 PTX Pentraxins are plasma proteins characterized by their pentameric discoid assembly and their Ca2+ dependent ligand binding, such as Serum amyloid P component (SAP) and C-reactive Protein (CRP), which are cytokine-inducible acute-phase proteins implicated in innate immunity Back     alignment and domain information
>smart00159 PTX Pentraxin / C-reactive protein / pentaxin family Back     alignment and domain information
>smart00560 LamGL LamG-like jellyroll fold domain Back     alignment and domain information
>smart00210 TSPN Thrombospondin N-terminal -like domains Back     alignment and domain information
>PF02973 Sialidase: Sialidase, N-terminal domain; InterPro: IPR004124 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd00110 LamG Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans Back     alignment and domain information
>PF10287 DUF2401: Putative TOS1-like glycosyl hydrolase (DUF2401); InterPro: IPR018805 This entry represents a family of proteins conserved primarily in fungi Back     alignment and domain information
>PF06439 DUF1080: Domain of Unknown Function (DUF1080); InterPro: IPR010496 This is a family of proteins of unknown function Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query282
1umz_A278 Xyloglucan Endotransglycosylase In Complex With The 9e-58
2uwb_A267 Crystal Structure Of The Nasturtium Seedling Mutant 4e-42
2vh9_A290 Crystal Structure Of Nxg1-Deltayniig In Complex Wit 4e-42
2uwc_A271 Crystal Structure Of Nasturtium Xyloglucan Hydrolas 1e-40
2uwa_A274 Crystal Structure Of The Nasturtium Seedling Xylogl 3e-40
3d6e_A201 Crystal Structure Of The Engineered 1,3-1,4-Beta-Gl 1e-11
1byh_A214 Molecular And Active-Site Structure Of A Bacillus ( 8e-11
1mac_A212 Crystal Structure And Site-Directed Mutagenesis Of 9e-11
1axk_A 394 Engineered Bacillus Bifunctional Enzyme Gluxyn-1 Le 2e-10
1cpm_A214 Native-Like In Vivo Folding Of A Circularly Permute 2e-10
1cpn_A208 Native-Like In Vivo Folding Of A Circularly Permute 3e-10
1gbg_A214 Bacillus Licheniformis Beta-Glucanase Length = 214 3e-10
1u0a_A214 Crystal Structure Of The Engineered Beta-1,3-1,4-En 4e-10
3o5s_A238 Crystal Structure Of The Endo-Beta-1,3-1,4 Glucanas 7e-10
3i4i_A234 Crystal Structure Of A Prokaryotic Beta-1,3-1,4-Glu 1e-08
1ajk_A214 Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4- Gluc 5e-08
>pdb|1UMZ|A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg. Length = 278 Back     alignment and structure 
Iteration: 1

 Score =  220 bits (560), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 108/251 (43%), Positives = 148/251 (58%), Gaps = 22/251 (8%)
Query: 34  TWGDGRAKITEGGKALTLSIDKKLGSGFQSKKDYLFARFDVEMKLIPGNAAGLVTTFYLS 93
           TW     K   GG  + L +DK  G+GFQSK  YLF  F ++MKL+PG++AG VT FYLS
Sbjct: 24  TWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAGTVTAFYLS 83
Query: 94  SLEGSHDEVDMEFLGNVTGEPYTLHTNIYAQGEGHRERGFHLWFDPSAKFHQYSIVWNPE 153
           S    HDE+D EFLGN TG+PY L TN++  G+G RE+  +LWFDP+ +FH YS++WN  
Sbjct: 84  SQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFHYYSVLWNMY 143
Query: 154 RIIFMVDNKAVRVHENLANLGVPFPAKQPMWLIASLWNGDQWATQKGRIKANWTDAPYTA 213
            I+F+VD+  +RV +N  +LGV FP  QPM + +SLWN D WAT+ G  K +W+ AP+ A
Sbjct: 144 MIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIA 203
Query: 214 HYRNLVI--------TKYAGNN----------QTLTNLDEKNIRSVQDKFMIYDYCD--- 252
            YR+  I         K+              Q L     + +  V+ K+ IY+YC    
Sbjct: 204 SYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAFQYRRLSWVRQKYTIYNYCTDRS 263
Query: 253 -YGVHPLECEK 262
            Y   P EC++
Sbjct: 264 RYPSMPPECKR 274
>pdb|2UWB|A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig Length = 267 Back     alignment and structure
>pdb|2VH9|A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide Length = 290 Back     alignment and structure
>pdb|2UWC|A Chain A, Crystal Structure Of Nasturtium Xyloglucan Hydrolase Isoform Nxg2 Length = 271 Back     alignment and structure
>pdb|2UWA|A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 Length = 274 Back     alignment and structure
>pdb|3D6E|A Chain A, Crystal Structure Of The Engineered 1,3-1,4-Beta-Glucanase Protein From Bacillus Licheniformis Length = 201 Back     alignment and structure
>pdb|1BYH|A Chain A, Molecular And Active-Site Structure Of A Bacillus (1-3,1-4)- Beta-Glucanase Length = 214 Back     alignment and structure
>pdb|1MAC|A Chain A, Crystal Structure And Site-Directed Mutagenesis Of Bacillus Macerans Endo-1,3-1,4-Beta-Glucanase Length = 212 Back     alignment and structure
>pdb|1AXK|A Chain A, Engineered Bacillus Bifunctional Enzyme Gluxyn-1 Length = 394 Back     alignment and structure
>pdb|1CPM|A Chain A, Native-Like In Vivo Folding Of A Circularly Permuted Jellyroll Protein Shown By Crystal Structure Analysis Length = 214 Back     alignment and structure
>pdb|1CPN|A Chain A, Native-Like In Vivo Folding Of A Circularly Permuted Jellyroll Protein Shown By Crystal Structure Analysis Length = 208 Back     alignment and structure
>pdb|1GBG|A Chain A, Bacillus Licheniformis Beta-Glucanase Length = 214 Back     alignment and structure
>pdb|1U0A|A Chain A, Crystal Structure Of The Engineered Beta-1,3-1,4-Endoglucanase H(A16- M) In Complex With Beta-Glucan Tetrasaccharide Length = 214 Back     alignment and structure
>pdb|3O5S|A Chain A, Crystal Structure Of The Endo-Beta-1,3-1,4 Glucanase From Bacillus Subtilis (Strain 168) Length = 238 Back     alignment and structure
>pdb|3I4I|A Chain A, Crystal Structure Of A Prokaryotic Beta-1,3-1,4-Glucanase (Lichenase) Derived From A Mouse Hindgut Metagenome Length = 234 Back     alignment and structure
>pdb|1AJK|A Chain A, Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4- Glucanohydrolase Cpa16m-84 Length = 214 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query282
1umz_A278 Xyloglucan endotransglycosylase; glycoside hydrola 1e-87
2uwa_A274 Cellulase; glycoside hydrolase, xyloglucan-endo-tr 4e-78
3o5s_A238 Beta-glucanase; glycosyl hydrolase, beta-jelly rol 4e-58
2ayh_A214 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolas 3e-57
3i4i_A234 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 2e-55
1cpn_A208 Circularly permuted; hydrolase(glucanase); 1.80A { 3e-55
1axk_A 394 Gluxyn-1; bifunctional, fusion protein, 1,4-beta-x 2e-48
1ajk_A214 CPA16M-84, circularly permuted (1-3,1-4)-beta-D-gl 1e-45
3h0o_A240 Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI st 4e-43
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 2e-20
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 8e-14
1dyp_A271 Kappa-carrageenase; hydrolase, kappa-carrageenan d 2e-09
2hyk_A245 Beta-1,3-glucanase; family 16, beta-jelly roll, ba 2e-09
4ate_A266 Beta-porphyranase A; hydrolase, AGAR degradation; 3e-09
3azy_A272 Laminarinase; beta-jelly roll fold, glycosyl hydro 5e-09
1ups_A420 Glcnac-alpha-1,4-GAL-releasing endo-beta- galactos 5e-09
3juu_A280 Porphyranase B; glycoside hydrolase family GH16, b 7e-09
1o4y_A288 Beta-agarase A; glycoside hydrolase family 16, aga 1e-08
2vy0_A264 Endo-beta-1,3-glucanase; hydrolase, laminarin, end 1e-08
4awd_A324 Beta-porphyranase; hydrolase; 2.40A {Bacteroides p 4e-08
3iln_A251 Laminarinase; jelly ROW, hydrolase, family 16 glyc 2e-07
3rq0_A269 Glycosyl hydrolases family protein 16; structural 3e-07
3dgt_A280 Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50 5e-06
4asm_B363 Beta-agarase D; hydrolase, glycoside hydrolase, en 4e-05
4atf_A308 Beta-agarase B; hydrolase, polysaccharidase, agaro 3e-04
1o4z_A346 Beta-agarase B; glycoside hydrolase family 16, aga 6e-04
>1umz_A Xyloglucan endotransglycosylase; glycoside hydrolase, XET, XTH, XEH, transglycosylation, transferase, glycosyltransferase; HET: NAG BMA BGC GAL; 1.8A {Populus tremula} SCOP: b.29.1.2 PDB: 1un1_A* Length = 278 Back     alignment and structure
 Score =  261 bits (669), Expect = 1e-87
 Identities = 108/270 (40%), Positives = 148/270 (54%), Gaps = 22/270 (8%)

Query: 13  SVSICCFVVTSKGDFNTDTKITWGDGRAKITEGGKALTLSIDKKLGSGFQSKKDYLFARF 72
           + +           F  +   TW     K   GG  + L +DK  G+GFQSK  YLF  F
Sbjct: 3   TAAFAALRKPVDVAFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHF 62

Query: 73  DVEMKLIPGNAAGLVTTFYLSSLEGSHDEVDMEFLGNVTGEPYTLHTNIYAQGEGHRERG 132
            ++MKL+PG++AG VT FYLSS    HDE+D EFLGN TG+PY L TN++  G+G RE+ 
Sbjct: 63  SMQMKLVPGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQR 122

Query: 133 FHLWFDPSAKFHQYSIVWNPERIIFMVDNKAVRVHENLANLGVPFPAKQPMWLIASLWNG 192
            +LWFDP+ +FH YS++WN   I+F+VD+  +RV +N  +LGV FP  QPM + +SLWN 
Sbjct: 123 IYLWFDPTKEFHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNA 182

Query: 193 DQWATQKGRIKANWTDAPYTAHYRNLVITKYAG------------------NNQTLTNLD 234
           D WAT+ G  K +W+ AP+ A YR+  I                         Q L    
Sbjct: 183 DDWATRGGLEKTDWSKAPFIASYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAFQ 242

Query: 235 EKNIRSVQDKFMIYDYCD----YGVHPLEC 260
            + +  V+ K+ IY+YC     Y   P EC
Sbjct: 243 YRRLSWVRQKYTIYNYCTDRSRYPSMPPEC 272
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A* Length = 274 Back     alignment and structure
>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} PDB: 3d6e_A Length = 238 Back     alignment and structure
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A Length = 214 Back     alignment and structure
>3i4i_A 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1.89A {Uncultured murine large bowel bacteriuorganism_taxid} Length = 234 Back     alignment and structure
>1cpn_A Circularly permuted; hydrolase(glucanase); 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 PDB: 1cpm_A Length = 208 Back     alignment and structure
>1axk_A Gluxyn-1; bifunctional, fusion protein, 1,4-beta-xylanase, 1,3-1,4-beta-glucanase, hybrid enzyme; 2.10A {Bacillus subtilis} SCOP: b.29.1.2 b.29.1.11 Length = 394 Back     alignment and structure
>1ajk_A CPA16M-84, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase; glucanase, circular permutation; HET: EPE; 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 Length = 214 Back     alignment and structure
>3h0o_A Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI stacking interactions, TRIS inhibition, hydrolase, glycosidase; 1.40A {Fibrobacter succinogenes} PDB: 1mve_A 1zm1_A* 2r4a_A 3hr9_A 2r49_A 3axd_A 3axe_A* Length = 240 Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Length = 214 Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Length = 214 Back     alignment and structure
>1dyp_A Kappa-carrageenase; hydrolase, kappa-carrageenan double helix degradation; HET: MSE; 1.54A {Pseudoalteromonas carrageenovora} SCOP: b.29.1.2 Length = 271 Back     alignment and structure
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A Length = 245 Back     alignment and structure
>4ate_A Beta-porphyranase A; hydrolase, AGAR degradation; 1.10A {Zobellia galactanivorans} PDB: 3ilf_A* Length = 266 Back     alignment and structure
>3azy_A Laminarinase; beta-jelly roll fold, glycosyl hydrolase family 16, laminari endo-1,3-beta-glucanase, hydrolase; 1.65A {Thermotoga maritima} PDB: 3azx_A 3azz_A* 3b00_A* 3b01_A 4dfs_A Length = 272 Back     alignment and structure
>1ups_A Glcnac-alpha-1,4-GAL-releasing endo-beta- galactosidase; endo-galactosidase, glycosyl hydrolase, PSI, protein structure initiative; 1.82A {Clostridium perfringens} SCOP: b.29.1.2 b.42.2.3 Length = 420 Back     alignment and structure
>3juu_A Porphyranase B; glycoside hydrolase family GH16, beta-sandwich fold, jelly roll, sugar binding protein, hydrolase-carbohydrate complex; HET: MES GOL; 1.80A {Zobellia galactanivorans} Length = 280 Back     alignment and structure
>1o4y_A Beta-agarase A; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: SO4; 1.48A {Zobellia galactanivorans} SCOP: b.29.1.2 PDB: 1urx_A* Length = 288 Back     alignment and structure
>2vy0_A Endo-beta-1,3-glucanase; hydrolase, laminarin, endoglucanase, thermostable protein,; 2.16A {Pyrococcus furiosus} Length = 264 Back     alignment and structure
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius} Length = 324 Back     alignment and structure
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus} Length = 251 Back     alignment and structure
>3rq0_A Glycosyl hydrolases family protein 16; structural genomics, PSI-biology; HET: PG4 211; 2.02A {Mycobacterium smegmatis} Length = 269 Back     alignment and structure
>3dgt_A Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50A {Streptomyces sioyaensis} Length = 280 Back     alignment and structure
>4asm_B Beta-agarase D; hydrolase, glycoside hydrolase, endo-beta-agarase; 1.50A {Zobellia galactanivorans} Length = 363 Back     alignment and structure
>4atf_A Beta-agarase B; hydrolase, polysaccharidase, agarolytic enzyme; HET: AAL GAL; 1.90A {Zobellia galactanivorans} Length = 308 Back     alignment and structure
>1o4z_A Beta-agarase B; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: EPE; 2.30A {Zobellia galactanivorans} SCOP: b.29.1.2 Length = 346 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query282
1umz_A278 Xyloglucan endotransglycosylase; glycoside hydrola 100.0
2uwa_A274 Cellulase; glycoside hydrolase, xyloglucan-endo-tr 100.0
3o5s_A238 Beta-glucanase; glycosyl hydrolase, beta-jelly rol 100.0
3i4i_A234 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 100.0
2ayh_A214 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolas 100.0
2hyk_A245 Beta-1,3-glucanase; family 16, beta-jelly roll, ba 100.0
1cpn_A208 Circularly permuted; hydrolase(glucanase); 1.80A { 100.0
3iln_A251 Laminarinase; jelly ROW, hydrolase, family 16 glyc 100.0
3h0o_A240 Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI st 100.0
1axk_A 394 Gluxyn-1; bifunctional, fusion protein, 1,4-beta-x 100.0
3rq0_A269 Glycosyl hydrolases family protein 16; structural 100.0
4ate_A266 Beta-porphyranase A; hydrolase, AGAR degradation; 100.0
3azy_A272 Laminarinase; beta-jelly roll fold, glycosyl hydro 100.0
2vy0_A264 Endo-beta-1,3-glucanase; hydrolase, laminarin, end 100.0
3juu_A280 Porphyranase B; glycoside hydrolase family GH16, b 100.0
4awd_A324 Beta-porphyranase; hydrolase; 2.40A {Bacteroides p 100.0
1o4y_A288 Beta-agarase A; glycoside hydrolase family 16, aga 100.0
1dyp_A271 Kappa-carrageenase; hydrolase, kappa-carrageenan d 100.0
1o4z_A346 Beta-agarase B; glycoside hydrolase family 16, aga 99.98
4atf_A308 Beta-agarase B; hydrolase, polysaccharidase, agaro 99.98
3dgt_A280 Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50 99.98
1ups_A420 Glcnac-alpha-1,4-GAL-releasing endo-beta- galactos 99.97
1ajk_A214 CPA16M-84, circularly permuted (1-3,1-4)-beta-D-gl 99.97
4asm_B363 Beta-agarase D; hydrolase, glycoside hydrolase, en 99.94
2w39_A298 Putative laminarinase; hydrolase, white ROT fungus 99.92
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 99.85
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 99.75
1ajk_A214 CPA16M-84, circularly permuted (1-3,1-4)-beta-D-gl 96.89
3flp_A217 SAP-like pentraxin; physiological doubly-stacked h 96.23
4dqa_A355 Uncharacterized protein; two domains structure, DU 92.41
3pvn_A206 C-reactive protein; pentraxin family, immune syste 92.03
3kqr_A204 Serum amyloid P-component; glycoprotein, disulfide 90.86
2jkb_A 686 Sialidase B; intramolecular trans-sialidase, lyase 89.38
2sli_A 679 Intramolecular trans-sialidase; hydrolase, neurami 88.4
>1umz_A Xyloglucan endotransglycosylase; glycoside hydrolase, XET, XTH, XEH, transglycosylation, transferase, glycosyltransferase; HET: NAG BMA BGC GAL; 1.8A {Populus tremula} SCOP: b.29.1.2 PDB: 1un1_A* Back     alignment and structure
Probab=100.00  E-value=1.1e-71  Score=511.73  Aligned_cols=242  Identities=45%  Similarity=0.867  Sum_probs=226.9

Q ss_pred             ccccccccCCeeeecCCCeEEeeCCcEEEEEEecCCCceEEEceeeEEEEEEEEEEecCCCCCceEEEEEEeeCCCCCCe
Q 038982           22 TSKGDFNTDTKITWGDGRAKITEGGKALTLSIDKKLGSGFQSKKDYLFARFDVEMKLIPGNAAGLVTTFYLSSLEGSHDE  101 (282)
Q Consensus        22 ~~~~~f~~~f~~~w~~~nv~~~~~g~~l~L~ld~~sGsgi~Sk~~~~yG~~eariKlp~g~s~G~v~AFwl~~~~p~~~E  101 (282)
                      ..+.+|.++|+++|+++||++.++|+.|+|+|++.+|++|.||+.|+||+||||||+|+++++|+||||||++++|.++|
T Consensus        12 ~~~~~f~~~~~~~w~~~nv~~~~~G~~l~L~l~~~tsa~i~Sk~~f~YGr~Ear~Klp~g~s~G~wpAfwll~~~p~~gE   91 (278)
T 1umz_A           12 PVDVAFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAGTVTAFYLSSQNSEHDE   91 (278)
T ss_dssp             CCCCCHHHHEEEEECGGGEEEEGGGTEEEEEECSSCCEEEEESSCEEEEEEEEEEECCCSCCTTEEEEEEEECSSSSCCE
T ss_pred             ccCCcccCCceeeECCCCEEEeCCCCEEEEEECCCccCEEEECcEEECEEEEEEEEeCCCCCCceEEEEEEecCCCCCCe
Confidence            35678999999999999999988888899999999999999999999999999999999878899999999998889999


Q ss_pred             eeEeeeCCCCCCCcEEEeeEeeCCCCCceeeeecCCCCCCCcEEEEEEEccCeEEEEEcCeEEEEEecccCCCCCCCCCC
Q 038982          102 VDMEFLGNVTGEPYTLHTNIYAQGEGHRERGFHLWFDPSAKFHQYSIVWNPERIIFMVDNKAVRVHENLANLGVPFPAKQ  181 (282)
Q Consensus       102 ID~E~lG~~~G~p~~~~TNv~~~g~g~~e~~~~l~fdp~~dfHtY~i~Wtp~~I~fyVDG~~vr~~~~~~~~g~~~P~~~  181 (282)
                      ||||++|+.+|+++++|+|+|.+|.+++++++.+++|++++||+|+|+|+|++|+|||||+++|++++.+..+.+||+++
T Consensus        92 IDmE~lG~~~g~~~tvhtn~~~~g~~~~~~~~~l~~d~~~dFHtY~i~Wtp~~I~fyVDG~~v~t~~~~~~~g~~~Pf~~  171 (278)
T 1umz_A           92 IDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQ  171 (278)
T ss_dssp             EEEEEECCSTTSCCEEEEEEEBTTBCCCCEEECCSSCTTTSCEEEEEEECSSEEEEEETTEEEEEEECCGGGTCCCSCSS
T ss_pred             EEEEEeCCCCCCceEEEEEEecCCCCCCcceEecCCCCccCcEEEEEEEecCeEEEEECCeEEEEEecCcCcCccCcCCC
Confidence            99999999989999999999999998898899999999999999999999999999999999999998776678899779


Q ss_pred             CeEEEEEeecCCCccCCCCccccCCCCCCeEEEEcEEEEeeee--------------cCC----cCCCHHHHHHHHHHhc
Q 038982          182 PMWLIASLWNGDQWATQKGRIKANWTDAPYTAHYRNLVITKYA--------------GNN----QTLTNLDEKNIRSVQD  243 (282)
Q Consensus       182 Pm~l~~nlW~gg~Wat~GG~~~~d~~~~Pf~a~~~~~~v~~c~--------------w~~----~~l~~~~~~~~~~~~~  243 (282)
                      ||+|++|||+||+|+++||++++||.++||+++|+.+++++|.              |+.    ++|++.|+++|+|||+
T Consensus       172 P~~lilnlw~GG~Wa~~gG~~~~d~~~~p~v~~vr~~~~~~c~~~~~~~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  251 (278)
T 1umz_A          172 PMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAFQYRRLSWVRQ  251 (278)
T ss_dssp             CBEEEEEEEECTTTSSGGGTSCCCGGGCCEEEEEEEEEEEEEECCSSSCCCTTTTCSGGGSGGGSSCCHHHHHHHHHHHH
T ss_pred             ceEEEEEEEECCcccCCCCccccCCCCCCEEEEEEEEEEecccCCCCCCccCCCcccccccCccccCCHHHHHHHHHHHH
Confidence            9999999999999999999889999999999999999999882              333    2799999999999999


Q ss_pred             cCeEEccCC----CCCCCCCcccC
Q 038982          244 KFMIYDYCD----YGVHPLECEKQ  263 (282)
Q Consensus       244 ~~~~y~yc~----~~~~~~ec~~~  263 (282)
                      ||||||||+    ||+.||||.++
T Consensus       252 ~~~~y~yc~d~~r~~~~~~ec~~~  275 (278)
T 1umz_A          252 KYTIYNYCTDRSRYPSMPPECKRD  275 (278)
T ss_dssp             HTEEEEGGGCTTTCSSCCTHHHHH
T ss_pred             CCeEEecCCCCCcCCCCCcccCCC
Confidence            999999999    99889999853
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A* Back     alignment and structure
>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} PDB: 3d6e_A Back     alignment and structure
>3i4i_A 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1.89A {Uncultured murine large bowel bacteriuorganism_taxid} Back     alignment and structure
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A Back     alignment and structure
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A Back     alignment and structure
>1cpn_A Circularly permuted; hydrolase(glucanase); 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 PDB: 1cpm_A Back     alignment and structure
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus} Back     alignment and structure
>3h0o_A Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI stacking interactions, TRIS inhibition, hydrolase, glycosidase; 1.40A {Fibrobacter succinogenes} SCOP: b.29.1.2 PDB: 1mve_A 1zm1_A* 2r4a_A 3hr9_A 2r49_A 3axd_A 3axe_A* Back     alignment and structure
>1axk_A Gluxyn-1; bifunctional, fusion protein, 1,4-beta-xylanase, 1,3-1,4-beta-glucanase, hybrid enzyme; 2.10A {Bacillus subtilis} SCOP: b.29.1.2 b.29.1.11 Back     alignment and structure
>3rq0_A Glycosyl hydrolases family protein 16; structural genomics, PSI-biology; HET: PG4 211; 2.02A {Mycobacterium smegmatis} Back     alignment and structure
>4ate_A Beta-porphyranase A; hydrolase, AGAR degradation; 1.10A {Zobellia galactanivorans} PDB: 3ilf_A* Back     alignment and structure
>3azy_A Laminarinase; beta-jelly roll fold, glycosyl hydrolase family 16, laminari endo-1,3-beta-glucanase, hydrolase; 1.65A {Thermotoga maritima} PDB: 3azx_A 3azz_A* 3b00_A* 3b01_A 4dfs_A Back     alignment and structure
>2vy0_A Endo-beta-1,3-glucanase; hydrolase, laminarin, endoglucanase, thermostable protein,; 2.16A {Pyrococcus furiosus} Back     alignment and structure
>3juu_A Porphyranase B; glycoside hydrolase family GH16, beta-sandwich fold, jelly roll, sugar binding protein, hydrolase-carbohydrate complex; HET: MES GOL; 1.80A {Zobellia galactanivorans} Back     alignment and structure
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius} Back     alignment and structure
>1o4y_A Beta-agarase A; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: SO4; 1.48A {Zobellia galactanivorans} SCOP: b.29.1.2 PDB: 1urx_A* Back     alignment and structure
>1dyp_A Kappa-carrageenase; hydrolase, kappa-carrageenan double helix degradation; HET: MSE; 1.54A {Pseudoalteromonas carrageenovora} SCOP: b.29.1.2 Back     alignment and structure
>1o4z_A Beta-agarase B; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: EPE; 2.30A {Zobellia galactanivorans} SCOP: b.29.1.2 Back     alignment and structure
>4atf_A Beta-agarase B; hydrolase, polysaccharidase, agarolytic enzyme; HET: AAL GAL; 1.90A {Zobellia galactanivorans} Back     alignment and structure
>3dgt_A Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50A {Streptomyces sioyaensis} Back     alignment and structure
>1ups_A Glcnac-alpha-1,4-GAL-releasing endo-beta- galactosidase; endo-galactosidase, glycosyl hydrolase, PSI, protein structure initiative; 1.82A {Clostridium perfringens} SCOP: b.29.1.2 b.42.2.3 Back     alignment and structure
>1ajk_A CPA16M-84, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase; glucanase, circular permutation; HET: EPE; 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>4asm_B Beta-agarase D; hydrolase, glycoside hydrolase, endo-beta-agarase; 1.50A {Zobellia galactanivorans} Back     alignment and structure
>2w39_A Putative laminarinase; hydrolase, white ROT fungus, glycosyl hydrolase, GH7, GH16, LAM16A, family 16, beta-glucan, basidiomycete; HET: NAG BGC LGC; 1.10A {Phanerochaete chrysosporium} PDB: 2cl2_A* 2w52_A* 2wlq_A* 2wne_A* Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>1ajk_A CPA16M-84, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase; glucanase, circular permutation; HET: EPE; 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>3flp_A SAP-like pentraxin; physiological doubly-stacked heptamer, pentraxin fold, cyclic heptamer, invertebrate lectin, sugar binding protein; 2.30A {Limulus polyphemus} PDB: 3flr_A 3flt_A Back     alignment and structure
>4dqa_A Uncharacterized protein; two domains structure, DUF 1735, laminin_G_3 concanavalin A- lectin/glucanases superfamily domain; HET: MSE; 1.50A {Bacteroides ovatus} Back     alignment and structure
>3pvn_A C-reactive protein; pentraxin family, immune system; 1.98A {Homo sapiens} SCOP: b.29.1.5 PDB: 1gnh_A 1lj7_A 3l2y_A 1b09_A 3pvo_A Back     alignment and structure
>3kqr_A Serum amyloid P-component; glycoprotein, disulfide bond, lectin, metal-binding secreted; HET: NAG; 1.50A {Homo sapiens} SCOP: b.29.1.5 PDB: 1lgn_A* 1gyk_A 2a3w_A* 2a3x_A* 2a3y_A* 1sac_A* 3d5o_A* 2w08_A* Back     alignment and structure
>2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A* Back     alignment and structure
>2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 282
d1umza_267 b.29.1.2 (A:) Xyloglucan endotransglycosylase {Eur 2e-79
d1ajka_214 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bac 1e-34
d2ayha_214 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {syn 6e-21
d1mvea_243 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fib 2e-19
d1dypa_271 b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseud 4e-13
d1o4ya_270 b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivo 5e-09
d1upsa1266 b.29.1.2 (A:19-284) GlcNAc-alpha-1,4-Gal-releasing 1e-05
>d1umza_ b.29.1.2 (A:) Xyloglucan endotransglycosylase {European aspen (Populus tremula) [TaxId: 113636]} Length = 267 Back     information, alignment and structure

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Glycosyl hydrolases family 16
domain: Xyloglucan endotransglycosylase
species: European aspen (Populus tremula) [TaxId: 113636]

 Score =  239 bits (610), Expect = 2e-79
 Identities = 108/257 (42%), Positives = 147/257 (57%), Gaps = 22/257 (8%)

Query: 26  DFNTDTKITWGDGRAKITEGGKALTLSIDKKLGSGFQSKKDYLFARFDVEMKLIPGNAAG 85
            F  +   TW     K   GG  + L +DK  G+GFQSK  YLF  F ++MKL+PG++AG
Sbjct: 5   AFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAG 64

Query: 86  LVTTFYLSSLEGSHDEVDMEFLGNVTGEPYTLHTNIYAQGEGHRERGFHLWFDPSAKFHQ 145
            VT FYLSS    HDE+D EFLGN TG+PY L TN++  G+G RE+  +LWFDP+ +FH 
Sbjct: 65  TVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFHY 124

Query: 146 YSIVWNPERIIFMVDNKAVRVHENLANLGVPFPAKQPMWLIASLWNGDQWATQKGRIKAN 205
           YS++WN   I+F+VD+  +RV +N  +LGV FP  QPM + +SLWN D WAT+ G  K +
Sbjct: 125 YSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNADDWATRGGLEKTD 184

Query: 206 WTDAPYTAHYRNLVITKYAGNN------------------QTLTNLDEKNIRSVQDKFMI 247
           W+ AP+ A YR+  I     +                   Q L     + +  V+ K+ I
Sbjct: 185 WSKAPFIASYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAFQYRRLSWVRQKYTI 244

Query: 248 YDYCD----YGVHPLEC 260
           Y+YC     Y   P EC
Sbjct: 245 YNYCTDRSRYPSMPPEC 261
>d1ajka_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans [TaxId: 44252]} Length = 214 Back     information, alignment and structure
>d2ayha_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid between Bacillus amyloliquefaciens and Bacillus macerans proteins} Length = 214 Back     information, alignment and structure
>d1mvea_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succinogenes [TaxId: 833]} Length = 243 Back     information, alignment and structure
>d1dypa_ b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseudoalteromonas carrageenovora [TaxId: 227]} Length = 271 Back     information, alignment and structure
>d1o4ya_ b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivorans [TaxId: 63186]} Length = 270 Back     information, alignment and structure
>d1upsa1 b.29.1.2 (A:19-284) GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, catalytic domain {Clostridium perfringens [TaxId: 1502]} Length = 266 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query282
d1umza_267 Xyloglucan endotransglycosylase {European aspen (P 100.0
d1ajka_214 Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans 100.0
d2ayha_214 Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid 100.0
d1mvea_243 Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succi 100.0
d1o4ya_270 beta-Agarase A {Zobellia galactanivorans [TaxId: 6 99.96
d1dypa_271 kappa-Carrageenase, catalytic {Pseudoalteromonas c 99.96
d1o4za_295 beta-Agarase A {Zobellia galactanivorans [TaxId: 6 99.95
d1upsa1266 GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosi 99.95
d2slia1196 Leech intramolecular trans-sialidase, N-terminal d 96.49
d1b09a_206 C-reactive protein (CRP) {Human (Homo sapiens) [Ta 95.43
d1epwa1218 Botulinum neurotoxin {Clostridium botulinum, serot 95.38
d2erfa1206 Thrombospondin 1 N-terminal domain {Human (Homo sa 94.85
d1a8da1247 Tetanus neurotoxin {Clostridium tetani [TaxId: 151 94.33
d1saca_204 Serum amyloid P component (SAP) {Human (Homo sapie 92.64
d1oq1a_223 Hypothetical protein YesU {Bacillus subtilis [TaxI 92.03
d3btaa1207 Botulinum neurotoxin {Clostridium botulinum, serot 89.13
d2r1da1177 Ligand-binding domain of neurexin 1beta {Rat (Ratt 86.73
d1w0pa2197 Vibrio cholerae sialidase, N-terminal and insertio 85.5
d1w0pa1192 Vibrio cholerae sialidase, N-terminal and insertio 84.34
>d1umza_ b.29.1.2 (A:) Xyloglucan endotransglycosylase {European aspen (Populus tremula) [TaxId: 113636]} Back     information, alignment and structure
class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Glycosyl hydrolases family 16
domain: Xyloglucan endotransglycosylase
species: European aspen (Populus tremula) [TaxId: 113636]

Probab=100.00  E-value=2.1e-73  Score=518.34  Aligned_cols=240  Identities=45%  Similarity=0.877  Sum_probs=228.6

Q ss_pred             ccccccCCeeeecCCCeEEeeCCcEEEEEEecCCCceEEEceeeEEEEEEEEEEecCCCCCceEEEEEEeeCCCCCCeee
Q 038982           24 KGDFNTDTKITWGDGRAKITEGGKALTLSIDKKLGSGFQSKKDYLFARFDVEMKLIPGNAAGLVTTFYLSSLEGSHDEVD  103 (282)
Q Consensus        24 ~~~f~~~f~~~w~~~nv~~~~~g~~l~L~ld~~sGsgi~Sk~~~~yG~~eariKlp~g~s~G~v~AFwl~~~~p~~~EID  103 (282)
                      ..+|.++|.++|+++||++.++|..|+|++|+.+|++|+||+.|+||+||||||||+++++|++++||+.++++.++|||
T Consensus         3 ~~~f~~~~~~~w~~~~v~~~~~g~~l~l~ld~~sga~i~Sk~~f~YG~~EariKlp~G~g~g~~~~f~~~s~~~~~dEID   82 (267)
T d1umza_           3 DVAFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAGTVTAFYLSSQNSEHDEID   82 (267)
T ss_dssp             CCCHHHHEEEEECGGGEEEEGGGTEEEEEECSSCCEEEEESSCEEEEEEEEEEECCCSCCTTEEEEEEEECSSSSCCEEE
T ss_pred             cccCCCCceecCCCCCEEEeCCCeEEEEEECCcccCceEecceEEeeEEEEEEEcCCCCccEEEEEeeecCCCCCCCeEE
Confidence            45799999999999999999999999999999999999999999999999999999998889999999998888999999


Q ss_pred             EeeeCCCCCCCcEEEeeEeeCCCCCceeeeecCCCCCCCcEEEEEEEccCeEEEEEcCeEEEEEecccCCCCCCCCCCCe
Q 038982          104 MEFLGNVTGEPYTLHTNIYAQGEGHRERGFHLWFDPSAKFHQYSIVWNPERIIFMVDNKAVRVHENLANLGVPFPAKQPM  183 (282)
Q Consensus       104 ~E~lG~~~G~p~~~~TNv~~~g~g~~e~~~~l~fdp~~dfHtY~i~Wtp~~I~fyVDG~~vr~~~~~~~~g~~~P~~~Pm  183 (282)
                      ||++|+.+++++++|||+|.++.+++++++.+++|++++||+|+|+|+|++|+|||||++||++++.+..+.+||.++||
T Consensus        83 iE~lG~~~~~~~~v~tn~~~~g~g~~~~~~~~~~d~s~dFHtY~i~Wtp~~I~fyVDG~~vr~~~n~~~~g~~~p~~~pm  162 (267)
T d1umza_          83 FEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPM  162 (267)
T ss_dssp             EEEECCSTTSCCEEEEEEEBTTBCCCCEEECCSSCTTTSCEEEEEEECSSEEEEEETTEEEEEEECCGGGTCCCSCSSCB
T ss_pred             EEEecccCCcccEEEeeEeCCCCCCcceeEecCCCCccCcEEEEEEECcceEEEEECCEEEEEEeccccCCCCCCcceEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999998889999988999


Q ss_pred             EEEEEeecCCCccCCCCccccCCCCCCeEEEEcEEEEeee---------------ecCC---cCCCHHHHHHHHHHhccC
Q 038982          184 WLIASLWNGDQWATQKGRIKANWTDAPYTAHYRNLVITKY---------------AGNN---QTLTNLDEKNIRSVQDKF  245 (282)
Q Consensus       184 ~l~~nlW~gg~Wat~GG~~~~d~~~~Pf~a~~~~~~v~~c---------------~w~~---~~l~~~~~~~~~~~~~~~  245 (282)
                      +|++|||+||+|||+||++++||+++||+|+|++|+|++|               +|..   +.|++.|+++|+|||+||
T Consensus       163 ~i~~niW~g~~Wat~gG~~~~d~~~aPf~a~~~~~~v~~c~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  242 (267)
T d1umza_         163 KIYSSLWNADDWATRGGLEKTDWSKAPFIASYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAFQYRRLSWVRQKY  242 (267)
T ss_dssp             EEEEEEEECTTTSSGGGTSCCCGGGCCEEEEEEEEEEEEEECCSSSCCCTTTTCSGGGSGGGSSCCHHHHHHHHHHHHHT
T ss_pred             EEEEeeeeCCCccccCCeeeecCCCCCEEEEEEEEEEEecccCCCCcccCCCCCccccccccccCCHHHHHHHHHHHHCC
Confidence            9999999999999999999999999999999999999999               2333   479999999999999999


Q ss_pred             eEEccCC----CCCCCCCcccC
Q 038982          246 MIYDYCD----YGVHPLECEKQ  263 (282)
Q Consensus       246 ~~y~yc~----~~~~~~ec~~~  263 (282)
                      |+||||.    ||..||||.++
T Consensus       243 ~~y~yC~d~~r~~~~p~EC~~~  264 (267)
T d1umza_         243 TIYNYCTDRSRYPSMPPECKRD  264 (267)
T ss_dssp             EEEEGGGCTTTCSSCCTHHHHH
T ss_pred             cEEccCCCCCcCCCCCcccCCC
Confidence            9999999    99779999864
>d1ajka_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans [TaxId: 44252]} Back     information, alignment and structure
>d2ayha_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid between Bacillus amyloliquefaciens and Bacillus macerans proteins} Back     information, alignment and structure
>d1mvea_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succinogenes [TaxId: 833]} Back     information, alignment and structure
>d1o4ya_ b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivorans [TaxId: 63186]} Back     information, alignment and structure
>d1dypa_ b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseudoalteromonas carrageenovora [TaxId: 227]} Back     information, alignment and structure
>d1o4za_ b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivorans [TaxId: 63186]} Back     information, alignment and structure
>d1upsa1 b.29.1.2 (A:19-284) GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, catalytic domain {Clostridium perfringens [TaxId: 1502]} Back     information, alignment and structure
>d2slia1 b.29.1.9 (A:81-276) Leech intramolecular trans-sialidase, N-terminal domain {North american leech (Macrobdella decora) [TaxId: 6405]} Back     information, alignment and structure
>d1b09a_ b.29.1.5 (A:) C-reactive protein (CRP) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1epwa1 b.29.1.6 (A:862-1079) Botulinum neurotoxin {Clostridium botulinum, serotype B [TaxId: 1491]} Back     information, alignment and structure
>d2erfa1 b.29.1.4 (A:10-215) Thrombospondin 1 N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1a8da1 b.29.1.6 (A:1-247) Tetanus neurotoxin {Clostridium tetani [TaxId: 1513]} Back     information, alignment and structure
>d1saca_ b.29.1.5 (A:) Serum amyloid P component (SAP) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1oq1a_ b.29.1.17 (A:) Hypothetical protein YesU {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d3btaa1 b.29.1.6 (A:872-1078) Botulinum neurotoxin {Clostridium botulinum, serotype A [TaxId: 1491]} Back     information, alignment and structure
>d2r1da1 b.29.1.4 (A:36-212) Ligand-binding domain of neurexin 1beta {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1w0pa2 b.29.1.8 (A:347-543) Vibrio cholerae sialidase, N-terminal and insertion domains {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1w0pa1 b.29.1.8 (A:25-216) Vibrio cholerae sialidase, N-terminal and insertion domains {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure