Citrus Sinensis ID: 038994

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-
MKMTETEAMQTSAAASPPVVLPTTVATTTIKSKKLTLIPLIFLIYFEVAGGPYGEEPAVKAAGPLYALLGFMIFPFIWSIPEALITAELSTAFPGDGGFVIWADRAFGPFFGSLMGSWKFLSGVINIAAFPVLCIDYLKKVIHPLESGWPRSLAIMVSTCILSFLNFTGLTIVGYAAVLLGLVSLSPFIIMSLAAIPKIKPHRWFSSGQKGLKKDWNLFFNTLFWNLNFWDNVSTLAGEVDRPQKTFPVALLVAVIFTCVAYLIPLFAVIGAVNVDQSQWDSGFHATAAEMIAGKWLKIWLEVGAVLSAIGLFEAQLSSSAYQILGMADLGFLPKFFGLRSKKFNTPWVGILVSTLITLGVSYMDFESIVASANFLYSLGMLLEFAAFIWLRMKKPQLKRPYRVPMKLPGLVIMCLIPSGFLVVIMVVATKIVYLVSGLMTLGAIGWYFFMKFLKSKNVIKFNDGGENEEG
cccccccccccccccccccccccccccccccccccccHHHHHHHEEEEEEccEEcccHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHcccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccc
cccccccccccccccccccccccccccccccHEEEccHHHEEEEEHHHcccccEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHcHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHcccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccc
mkmteteamqtsaaasppvvlpttvatttikskkltliPLIFLIYFEvaggpygeepavkaagpLYALLGFMIFPFIWSIPEALITAElstafpgdggfviwadrafgpffgslmGSWKFLSGVINIAAFPVLCIDYLKKVihplesgwprSLAIMVSTCILSFLNFTGLTIVGYAAVLLGLVSLSPFIIMSLaaipkikphrwfssgqkglkKDWNLFFNTLFWNLNFWDNVStlagevdrpqktfPVALLVAVIFTCVAYLIPLFAVIGavnvdqsqwdsgFHATAAEMIAGKWLKIWLEVGAVLSAIGLFEAQLSSSAYQILGmadlgflpkffglrskkfntpwVGILVSTLITLGVSYMDFESIVASANFLYSLGMLLEFAAFIWLRMkkpqlkrpyrvpmklpglVIMCLIPSGFLVVIMVVATKIVYLVSGLMTLGAIGWYFFMKFLKSKNVikfndggeneeg
mkmteteamqtsaaasppvvlpTTVATttikskkltliPLIFLIYFEVAGGPYGEEPAVKAAGPLYALLGFMIFPFIWSIPEALITAELSTAFPGDGGFVIWADRAFGPFFGSLMGSWKFLSGVINIAAFPVLCIDYLKKVIHPLESGWPRSLAIMVSTCILSFLNFTGLTIVGYAAVLLGLVSLSPFIIMSLAAIPKIKPHRWFSSGQKGLKKDWNLFFNTLFWNLNFWDNVSTLAGEVDRPQKTFPVALLVAVIFTCVAYLIPLFAVIGAVNVDQSQWDSGFHATAAEMIAGKWLKIWLEVGAVLSAIGLFEAQLSSSAYQILGMADLGFLPKFFGLRSKKFNTPWVGILVSTLITLGVSYMDFESIVASANFLYSLGMLLEFAAFIWLRMKKPQLKRPYRVPMKLPGLVIMCLIPSGFLVVIMVVATKIVYLVSGLMTLGAIGWYFFMKFLKSKNVikfndggeneeg
MKMTETEAMQtsaaasppvvlpttvatttikskkltlipliFLIYFEVAGGPYGEEPAVKAAGPLYALLGFMIFPFIWSIPEALITAELSTAFPGDGGFVIWADRAFGPFFGSLMGSWKFLSGVINIAAFPVLCIDYLKKVIHPLESGWPRSLAIMVSTCILSFLNFTGLTIVGYAAVLLGLVSLSPFIIMSLAAIPKIKPHRWFSSGQKGLKKDwnlffntlfwnlnfwDNVSTLAGEVDRPQKTFPVALLVAVIFTCVAYLIPLFAVIGAVNVDQSQWDSGFHATAAEMIAGKWLKIWLEVGAVLSAIGLFEAQLSSSAYQILGMADLGFLPKFFGLRSKKFNTPWVGILVSTLITLGVSYMDFESIVASANFLYSLGMLLEFAAFIWLRMKKPQLKRPYRVPMKLPGLVIMCLIPSGFLVVIMVVATKIVYLVSGLMTLGAIGWYFFMKFLKSKNVIKFNDGGENEEG
**********************************LTLIPLIFLIYFEVAGGPYGEEPAVKAAGPLYALLGFMIFPFIWSIPEALITAELSTAFPGDGGFVIWADRAFGPFFGSLMGSWKFLSGVINIAAFPVLCIDYLKKVIHPLESGWPRSLAIMVSTCILSFLNFTGLTIVGYAAVLLGLVSLSPFIIMSLAAIPKIKPHRWFSSGQKGLKKDWNLFFNTLFWNLNFWDNVSTLAGEVDRPQKTFPVALLVAVIFTCVAYLIPLFAVIGAVNVDQSQWDSGFHATAAEMIAGKWLKIWLEVGAVLSAIGLFEAQLSSSAYQILGMADLGFLPKFFGLRSKKFNTPWVGILVSTLITLGVSYMDFESIVASANFLYSLGMLLEFAAFIWLRMKKPQLKRPYRVPMKLPGLVIMCLIPSGFLVVIMVVATKIVYLVSGLMTLGAIGWYFFMKFLKSKNVIKF*********
************************************LIPLIFLIYFEVAGGPYGEEPAVKAAGPLYALLGFMIFPFIWSIPEALITAELSTAFPGDGGFVIWADRAFGPFFGSLMGSWKFLSGVINIAAFPVLCIDYLKKVIHPLESGWPRSLAIMVSTCILSFLNFTGLTIVGYAAVLLGLVSLSPFIIMSLAAIPKIKPHRWFSSGQKGLKKDWNLFFNTLFWNLNFWDNVSTLAGEVDRPQKTFPVALLVAVIFTCVAYLIPLFAVIGAVNVDQSQWDSGFHATAAEMIAGKWLKIWLEVGAVLSAIGLFEAQLSSSAYQILGMADLGFLPKFFGLRSKKFNTPWVGILVSTLITLGVSYMDFESIVASANFLYSLGMLLEFAAFIWLRMKKPQLKRPYRVPMKLPGLVIMCLIPSGFLVVIMVVATKIVYLVSGLMTLGAIGWYFFMKFL*****************
****************PPVVLPTTVATTTIKSKKLTLIPLIFLIYFEVAGGPYGEEPAVKAAGPLYALLGFMIFPFIWSIPEALITAELSTAFPGDGGFVIWADRAFGPFFGSLMGSWKFLSGVINIAAFPVLCIDYLKKVIHPLESGWPRSLAIMVSTCILSFLNFTGLTIVGYAAVLLGLVSLSPFIIMSLAAIPKIKPHRWFSSGQKGLKKDWNLFFNTLFWNLNFWDNVSTLAGEVDRPQKTFPVALLVAVIFTCVAYLIPLFAVIGAVNVDQSQWDSGFHATAAEMIAGKWLKIWLEVGAVLSAIGLFEAQLSSSAYQILGMADLGFLPKFFGLRSKKFNTPWVGILVSTLITLGVSYMDFESIVASANFLYSLGMLLEFAAFIWLRMKKPQLKRPYRVPMKLPGLVIMCLIPSGFLVVIMVVATKIVYLVSGLMTLGAIGWYFFMKFLKSKNVIKFNDGGENEEG
*****************************IKSKKLTLIPLIFLIYFEVAGGPYGEEPAVKAAGPLYALLGFMIFPFIWSIPEALITAELSTAFPGDGGFVIWADRAFGPFFGSLMGSWKFLSGVINIAAFPVLCIDYLKKVIHPLESGWPRSLAIMVSTCILSFLNFTGLTIVGYAAVLLGLVSLSPFIIMSLAAIPKIKPHRWFSSGQKGLKKDWNLFFNTLFWNLNFWDNVSTLAGEVDRPQKTFPVALLVAVIFTCVAYLIPLFAVIGAVNVDQSQWDSGFHATAAEMIAGKWLKIWLEVGAVLSAIGLFEAQLSSSAYQILGMADLGFLPKFFGLRSKKFNTPWVGILVSTLITLGVSYMDFESIVASANFLYSLGMLLEFAAFIWLRMKKPQLKRPYRVPMKLPGLVIMCLIPSGFLVVIMVVATKIVYLVSGLMTLGAIGWYFFMKFLKSKNVIKFNDG******
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
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MKMTETEAMQTSAAASPPVVLPTTVATTTIKSKKLTLIPLIFLIYFEVAGGPYGEEPAVKAAGPLYALLGFMIFPFIWSIPEALITAELSTAFPGDGGFVIWADRAFGPFFGSLMGSWKFLSGVINIAAFPVLCIDYLKKVIHPLESGWPRSLAIMVSTCILSFLNFTGLTIVGYAAVLLGLVSLSPFIIMSLAAIPKIKPHRWFSSGQKGLKKDWNLFFNTLFWNLNFWDNVSTLAGEVDRPQKTFPVALLVAVIFTCVAYLIPLFAVIGAVNVDQSQWDSGFHATAAEMIAGKWLKIWLEVGAVLSAIGLFEAQLSSSAYQILGMADLGFLPKFFGLRSKKFNTPWVGILVSTLITLGVSYMDFESIVASANFLYSLGMLLEFAAFIWLRMKKPQLKRPYRVPMKLPGLVIMCLIPSGFLVVIMVVATKIVYLVSGLMTLGAIGWYFFMKFLKSKNVIKFNDGGENEEG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query471 2.2.26 [Sep-21-2011]
Q9LHN7478 Probable polyamine transp yes no 0.963 0.949 0.747 0.0
Q6Z8D0531 Polyamine transporter PUT yes no 0.904 0.802 0.485 1e-113
A2X8M8531 Polyamine transporter PUT N/A no 0.904 0.802 0.485 1e-113
Q9C6S5495 Probable polyamine transp no no 0.976 0.929 0.436 1e-113
Q9FFL1490 Polyamine transporter RMV no no 0.878 0.844 0.493 1e-113
Q9LH39479 Probable polyamine transp no no 0.908 0.893 0.489 1e-111
Q9C6S4482 Probable polyamine transp no no 0.900 0.879 0.468 1e-105
Q9WTR6502 Cystine/glutamate transpo yes no 0.768 0.721 0.232 2e-12
Q28I80514 Y+L amino acid transporte yes no 0.781 0.715 0.223 1e-10
Q8ZGS9444 Arginine/agmatine antipor yes no 0.664 0.704 0.236 4e-10
>sp|Q9LHN7|PHSC_ARATH Probable polyamine transporter At3g13620 OS=Arabidopsis thaliana GN=At3g13620 PE=2 SV=1 Back     alignment and function desciption
 Score =  704 bits (1817), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/459 (74%), Positives = 401/459 (87%), Gaps = 5/459 (1%)

Query: 9   MQTSAAASPPVVLPTTVATTTIK---SKKLTLIPLIFLIYFEVAGGPYGEEPAVKAAGPL 65
           M  S A+     LP T A ++ K   +KKLTLIPL+FLIYFEVAGGP+GEEPAV+AAGPL
Sbjct: 1   MAISEASKSSHELPVTTAESSGKKATAKKLTLIPLVFLIYFEVAGGPFGEEPAVQAAGPL 60

Query: 66  YALLGFMIFPFIWSIPEALITAELSTAFPGDGGFVIWADRAFGPFFGSLMGSWKFLSGVI 125
            A+LGF+IFPFIWSIPEALITAELSTAFPG+GGFVIWA RAFG F GS+MGS KFLSGVI
Sbjct: 61  LAILGFLIFPFIWSIPEALITAELSTAFPGNGGFVIWAHRAFGSFVGSMMGSLKFLSGVI 120

Query: 126 NIAAFPVLCIDYLKKVIHPLESGWPRSLAIMVSTCILSFLNFTGLTIVGYAAVLLGLVSL 185
           N+A+FPVLC+ YL K+   LESGWPR++ I  ST +LSFLN+TGL IVGYAAV+LGLVSL
Sbjct: 121 NVASFPVLCVTYLDKLFPVLESGWPRNVCIFASTVVLSFLNYTGLAIVGYAAVVLGLVSL 180

Query: 186 SPFIIMSLAAIPKIKPHRWFSSGQKGLKKDWNLFFNTLFWNLNFWDNVSTLAGEVDRPQK 245
           SPF++MS  AIPKIKPHRW S G K  KKDWNL+FNTLFWNLNFWDNVSTLAGEVD PQK
Sbjct: 181 SPFLVMSAMAIPKIKPHRWGSLGTK--KKDWNLYFNTLFWNLNFWDNVSTLAGEVDEPQK 238

Query: 246 TFPVALLVAVIFTCVAYLIPLFAVIGAVNVDQSQWDSGFHATAAEMIAGKWLKIWLEVGA 305
           TFP+ALL+AVIFTCVAYLIPLFAV GAV+VDQS+W++GFHA AAEMIAGKWLKIW+E+GA
Sbjct: 239 TFPLALLIAVIFTCVAYLIPLFAVTGAVSVDQSRWENGFHAEAAEMIAGKWLKIWIEIGA 298

Query: 306 VLSAIGLFEAQLSSSAYQILGMADLGFLPKFFGLRSKKFNTPWVGILVSTLITLGVSYMD 365
           VLS+IGLFEAQLSSSAYQ+ GMA+LGFLPKFFG+RSK FNTPWVGIL+S L++LG+SYM+
Sbjct: 299 VLSSIGLFEAQLSSSAYQLEGMAELGFLPKFFGVRSKWFNTPWVGILISALMSLGLSYMN 358

Query: 366 FESIVASANFLYSLGMLLEFAAFIWLRMKKPQLKRPYRVPMKLPGLVIMCLIPSGFLVVI 425
           F  I++SANFLY+LGM LEFA+FIWLR K PQLKRPYRVP+K+PGLV+MCLIPS FLV+I
Sbjct: 359 FTDIISSANFLYTLGMFLEFASFIWLRRKLPQLKRPYRVPLKIPGLVVMCLIPSAFLVLI 418

Query: 426 MVVATKIVYLVSGLMTLGAIGWYFFMKFLKSKNVIKFND 464
           +V ATKIVYL+ G+MT+GAIGWYF + + +   + +FN+
Sbjct: 419 LVFATKIVYLICGVMTIGAIGWYFLINYFRKTKIFEFNE 457
Probable cell membrane polyamine/proton symporter involved in the polyamine uptake in cells.
Arabidopsis thaliana (taxid: 3702)
>sp|Q6Z8D0|PUT1_ORYSJ Polyamine transporter PUT1 OS=Oryza sativa subsp. japonica GN=PUT1 PE=1 SV=1 Back     alignment and function description
>sp|A2X8M8|PUT1_ORYSI Polyamine transporter PUT1 OS=Oryza sativa subsp. indica GN=PUT1 PE=3 SV=1 Back     alignment and function description
>sp|Q9C6S5|PHSB_ARATH Probable polyamine transporter At1g31830 OS=Arabidopsis thaliana GN=At1g31830 PE=2 SV=1 Back     alignment and function description
>sp|Q9FFL1|RMV1_ARATH Polyamine transporter RMV1 OS=Arabidopsis thaliana GN=RMV1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LH39|PHSD_ARATH Probable polyamine transporter At3g19553 OS=Arabidopsis thaliana GN=At3g19553 PE=3 SV=1 Back     alignment and function description
>sp|Q9C6S4|PHSA_ARATH Probable polyamine transporter At1g31820 OS=Arabidopsis thaliana GN=At1g31820 PE=3 SV=1 Back     alignment and function description
>sp|Q9WTR6|XCT_MOUSE Cystine/glutamate transporter OS=Mus musculus GN=Slc7a11 PE=1 SV=1 Back     alignment and function description
>sp|Q28I80|YLAT2_XENTR Y+L amino acid transporter 2 OS=Xenopus tropicalis GN=slc7a6 PE=2 SV=1 Back     alignment and function description
>sp|Q8ZGS9|ADIC_YERPE Arginine/agmatine antiporter OS=Yersinia pestis GN=adiC PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query471
255572268465 amino acid transporter, putative [Ricinu 0.966 0.978 0.805 0.0
224057048471 neutral amino acid transport protein [Po 0.980 0.980 0.793 0.0
356551723481 PREDICTED: cystine/glutamate transporter 0.983 0.962 0.741 0.0
255572262457 amino acid transporter, putative [Ricinu 0.902 0.929 0.809 0.0
18400079478 Amino acid permease family protein [Arab 0.963 0.949 0.747 0.0
356500723470 PREDICTED: arginine/agmatine antiporter- 0.927 0.929 0.764 0.0
297834186478 amino acid permease family protein [Arab 0.963 0.949 0.738 0.0
357489775467 Neutral amino acid transport protein [Me 0.936 0.944 0.770 0.0
225435716473 PREDICTED: uncharacterized transporter l 0.915 0.911 0.752 0.0
449476312474 PREDICTED: probable polyamine transporte 0.919 0.913 0.724 0.0
>gi|255572268|ref|XP_002527073.1| amino acid transporter, putative [Ricinus communis] gi|223533578|gb|EEF35317.1| amino acid transporter, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  749 bits (1935), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/458 (80%), Positives = 415/458 (90%), Gaps = 3/458 (0%)

Query: 9   MQTS-AAASPPVVLP--TTVATTTIKSKKLTLIPLIFLIYFEVAGGPYGEEPAVKAAGPL 65
           MQTS  + + P  LP  TTV T++   KKLTLIPLIFLIYFEVAGGPYGEEPAV+AAGPL
Sbjct: 1   MQTSLESPNTPQELPITTTVTTSSKIPKKLTLIPLIFLIYFEVAGGPYGEEPAVQAAGPL 60

Query: 66  YALLGFMIFPFIWSIPEALITAELSTAFPGDGGFVIWADRAFGPFFGSLMGSWKFLSGVI 125
           YALLGF+IFPFIWSIPEALITAELSTA+PG+GGFVIWADRAFGPF+GSLMGSWKFLSGVI
Sbjct: 61  YALLGFLIFPFIWSIPEALITAELSTAYPGNGGFVIWADRAFGPFYGSLMGSWKFLSGVI 120

Query: 126 NIAAFPVLCIDYLKKVIHPLESGWPRSLAIMVSTCILSFLNFTGLTIVGYAAVLLGLVSL 185
           NIAAFP+LCIDY++KV+  L SGWPR +A+ +ST  LSFLN+TGLTIVGY AVLLG+VSL
Sbjct: 121 NIAAFPILCIDYMEKVLPVLASGWPRKVALFISTLFLSFLNYTGLTIVGYVAVLLGIVSL 180

Query: 186 SPFIIMSLAAIPKIKPHRWFSSGQKGLKKDWNLFFNTLFWNLNFWDNVSTLAGEVDRPQK 245
           SPFIIMSL AIPKIKPHRW S GQK +KKDW L+FNTLFWNLNFWDNVSTLAGEVDRPQK
Sbjct: 181 SPFIIMSLIAIPKIKPHRWISLGQKDVKKDWTLYFNTLFWNLNFWDNVSTLAGEVDRPQK 240

Query: 246 TFPVALLVAVIFTCVAYLIPLFAVIGAVNVDQSQWDSGFHATAAEMIAGKWLKIWLEVGA 305
           TFPVAL  AVIFTCV+YL+PLFAVIGAV+VDQS+W+SGFHATAAE+IAGKWLK W+EVGA
Sbjct: 241 TFPVALFAAVIFTCVSYLVPLFAVIGAVSVDQSEWESGFHATAAELIAGKWLKYWIEVGA 300

Query: 306 VLSAIGLFEAQLSSSAYQILGMADLGFLPKFFGLRSKKFNTPWVGILVSTLITLGVSYMD 365
           VLSAIGLFEAQ+SSSAYQ+LGMADLGFLP+FF  RSK FNTPWVGIL+ST+ITLGVSYM+
Sbjct: 301 VLSAIGLFEAQMSSSAYQLLGMADLGFLPQFFAKRSKWFNTPWVGILLSTIITLGVSYMN 360

Query: 366 FESIVASANFLYSLGMLLEFAAFIWLRMKKPQLKRPYRVPMKLPGLVIMCLIPSGFLVVI 425
           F  I++SANFLYSLGMLLEFA+F+WLR K P LKRPY +PM+LPGL+IMCLIPSGFLV+I
Sbjct: 361 FTDIISSANFLYSLGMLLEFASFLWLRRKVPTLKRPYAIPMRLPGLIIMCLIPSGFLVLI 420

Query: 426 MVVATKIVYLVSGLMTLGAIGWYFFMKFLKSKNVIKFN 463
           M +ATK VYLVSGLMT+GAIGWYF MKF KSK + K++
Sbjct: 421 MAIATKTVYLVSGLMTVGAIGWYFLMKFCKSKKLFKYS 458

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224057048|ref|XP_002299117.1| neutral amino acid transport protein [Populus trichocarpa] gi|222846375|gb|EEE83922.1| neutral amino acid transport protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356551723|ref|XP_003544223.1| PREDICTED: cystine/glutamate transporter-like [Glycine max] Back     alignment and taxonomy information
>gi|255572262|ref|XP_002527070.1| amino acid transporter, putative [Ricinus communis] gi|223533575|gb|EEF35314.1| amino acid transporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|18400079|ref|NP_566460.1| Amino acid permease family protein [Arabidopsis thaliana] gi|75311177|sp|Q9LHN7.1|PHSC_ARATH RecName: Full=Probable polyamine transporter At3g13620 gi|11994564|dbj|BAB02604.1| unnamed protein product [Arabidopsis thaliana] gi|15810469|gb|AAL07122.1| unknown protein [Arabidopsis thaliana] gi|332641862|gb|AEE75383.1| Amino acid permease family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356500723|ref|XP_003519181.1| PREDICTED: arginine/agmatine antiporter-like [Glycine max] Back     alignment and taxonomy information
>gi|297834186|ref|XP_002884975.1| amino acid permease family protein [Arabidopsis lyrata subsp. lyrata] gi|297330815|gb|EFH61234.1| amino acid permease family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|357489775|ref|XP_003615175.1| Neutral amino acid transport protein [Medicago truncatula] gi|355516510|gb|AES98133.1| Neutral amino acid transport protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|225435716|ref|XP_002283522.1| PREDICTED: uncharacterized transporter lpg1691-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|449476312|ref|XP_004154702.1| PREDICTED: probable polyamine transporter At3g13620-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query471
TAIR|locus:2086794478 PUT4 "POLYAMINE UPTAKE TRANSPO 0.893 0.880 0.739 1e-171
TAIR|locus:2101520479 PUT5 "POLYAMINE UPTAKE TRANSPO 0.885 0.870 0.478 4.9e-101
UNIPROTKB|Q6Z8D0531 PUT1 "Polyamine transporter PU 0.887 0.787 0.460 2.5e-97
TAIR|locus:2166354490 RMV1 "resistant to methyl viol 0.891 0.857 0.451 5.9e-96
TAIR|locus:2034451495 PUT2 "POLYAMINE UPTAKE TRANSPO 0.885 0.842 0.433 1.1e-94
TAIR|locus:2034461482 PUT1 "POLYAMINE UPTAKE TRANSPO 0.881 0.860 0.446 2.7e-93
DICTYBASE|DDB_G0267504488 DDB_G0267504 "putative amino a 0.898 0.866 0.292 3.7e-48
TIGR_CMR|BA_0593471 BA_0593 "amino acid permease f 0.830 0.830 0.236 1.8e-15
MGI|MGI:1347355502 Slc7a11 "solute carrier family 0.779 0.731 0.228 2.1e-15
RGD|1309275502 Slc7a11 "solute carrier family 0.779 0.731 0.228 3.6e-15
TAIR|locus:2086794 PUT4 "POLYAMINE UPTAKE TRANSPORTER 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1669 (592.6 bits), Expect = 1.0e-171, P = 1.0e-171
 Identities = 313/423 (73%), Positives = 365/423 (86%)

Query:    42 FLIYFEVAGGPYGEEPAVKAAGPLYALLGFMIFPFIWSIPEALITAELSTAFPGDGGFVI 101
             FLIYFEVAGGP+GEEPAV+AAGPL A+LGF+IFPFIWSIPEALITAELSTAFPG+GGFVI
Sbjct:    37 FLIYFEVAGGPFGEEPAVQAAGPLLAILGFLIFPFIWSIPEALITAELSTAFPGNGGFVI 96

Query:   102 WADRAFGPFFGSLMGSWKFLSGVINIAAFPVLCIDYLKKVIHPLESGWPRSLAIMVSTCI 161
             WA RAFG F GS+MGS KFLSGVIN+A+FPVLC+ YL K+   LESGWPR++ I  ST +
Sbjct:    97 WAHRAFGSFVGSMMGSLKFLSGVINVASFPVLCVTYLDKLFPVLESGWPRNVCIFASTVV 156

Query:   162 LSFLNFTGLTIVGYAAVLLGLVSLSPFIIMSLAAIPKIKPHRWFSSGQKGLKKDXXXXXX 221
             LSFLN+TGL IVGYAAV+LGLVSLSPF++MS  AIPKIKPHRW S G K  KKD      
Sbjct:   157 LSFLNYTGLAIVGYAAVVLGLVSLSPFLVMSAMAIPKIKPHRWGSLGTK--KKDWNLYFN 214

Query:   222 XXXXXXXXXDNVSTLAGEVDRPQKTFPVALLVAVIFTCVAYLIPLFAVIGAVNVDQSQWD 281
                      DNVSTLAGEVD PQKTFP+ALL+AVIFTCVAYLIPLFAV GAV+VDQS+W+
Sbjct:   215 TLFWNLNFWDNVSTLAGEVDEPQKTFPLALLIAVIFTCVAYLIPLFAVTGAVSVDQSRWE 274

Query:   282 SGFHATAAEMIAGKWLKIWLEVGAVLSAIGLFEAQLSSSAYQILGMADLGFLPKFFGLRS 341
             +GFHA AAEMIAGKWLKIW+E+GAVLS+IGLFEAQLSSSAYQ+ GMA+LGFLPKFFG+RS
Sbjct:   275 NGFHAEAAEMIAGKWLKIWIEIGAVLSSIGLFEAQLSSSAYQLEGMAELGFLPKFFGVRS 334

Query:   342 KKFNTPWVGILVSTLITLGVSYMDFESIVASANFLYSLGMLLEFAAFIWLRMKKPQLKRP 401
             K FNTPWVGIL+S L++LG+SYM+F  I++SANFLY+LGM LEFA+FIWLR K PQLKRP
Sbjct:   335 KWFNTPWVGILISALMSLGLSYMNFTDIISSANFLYTLGMFLEFASFIWLRRKLPQLKRP 394

Query:   402 YRVPMKLPGLVIMCLIPSGFLVVIMVVATKIVYLVSGLMTLGAIGWYFFMKFLKSKNVIK 461
             YRVP+K+PGLV+MCLIPS FLV+I+V ATKIVYL+ G+MT+GAIGWYF + + +   + +
Sbjct:   395 YRVPLKIPGLVVMCLIPSAFLVLILVFATKIVYLICGVMTIGAIGWYFLINYFRKTKIFE 454

Query:   462 FND 464
             FN+
Sbjct:   455 FNE 457
GO:0005886 "plasma membrane" evidence=ISM
GO:0015326 "cationic amino acid transmembrane transporter activity" evidence=ISS
GO:0016020 "membrane" evidence=IEA
GO:0016126 "sterol biosynthetic process" evidence=RCA
GO:0046520 "sphingoid biosynthetic process" evidence=RCA
GO:0015203 "polyamine transmembrane transporter activity" evidence=IGI;IDA
GO:0015846 "polyamine transport" evidence=IDA
TAIR|locus:2101520 PUT5 "POLYAMINE UPTAKE TRANSPORTER 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q6Z8D0 PUT1 "Polyamine transporter PUT1" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2166354 RMV1 "resistant to methyl viologen 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2034451 PUT2 "POLYAMINE UPTAKE TRANSPORTER 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2034461 PUT1 "POLYAMINE UPTAKE TRANSPORTER 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0267504 DDB_G0267504 "putative amino acid permease" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
TIGR_CMR|BA_0593 BA_0593 "amino acid permease family protein" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
MGI|MGI:1347355 Slc7a11 "solute carrier family 7 (cationic amino acid transporter, y+ system), member 11" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1309275 Slc7a11 "solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q6Z8D0PUT1_ORYSJNo assigned EC number0.48510.90440.8022yesno
Q9LHN7PHSC_ARATHNo assigned EC number0.74720.96390.9497yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
PtrLAT2
neutral amino acid transport protein (471 aa)
(Populus trichocarpa)
Predicted Functional Partners:
estExt_Genewise1_v1.C_7550001
cationic amino acid transporter (348 aa)
  •     0.489
grail3.0090011402
cationic amino acid transporter (338 aa)
  •     0.488
PtrCAT9
cationic amino acid transporter (577 aa)
  •     0.478
eugene3.00012760
cationic amino acid transporter (236 aa)
  •     0.432

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query471
pfam13520425 pfam13520, AA_permease_2, Amino acid permease 2e-27
COG0531466 COG0531, PotE, Amino acid transporters [Amino acid 7e-27
TIGR00909429 TIGR00909, 2A0306, amino acid transporter 6e-23
TIGR00908442 TIGR00908, 2A0305, ethanolamine permease 6e-15
pfam00324473 pfam00324, AA_permease, Amino acid permease 1e-14
TIGR00911501 TIGR00911, 2A0308, L-type amino acid transporter 1e-13
PRK10644445 PRK10644, PRK10644, arginine:agmatin antiporter; P 3e-12
TIGR03813474 TIGR03813, put_Glu_GABA_T, putative glutamate/gamm 2e-11
PRK11357445 PRK11357, frlA, putative fructoselysine transporte 3e-11
TIGR00905473 TIGR00905, 2A0302, transporter, basic amino acid/p 4e-08
PRK10197446 PRK10197, PRK10197, gamma-aminobutyrate transporte 4e-07
COG1113462 COG1113, AnsP, Gamma-aminobutyrate permease and re 7e-06
TIGR00906557 TIGR00906, 2A0303, cationic amino acid transport p 9e-06
TIGR00910507 TIGR00910, 2A0307_GadC, glutamate:gamma-aminobutyr 2e-05
COG0833541 COG0833, LysP, Amino acid transporters [Amino acid 2e-04
TIGR04299430 TIGR04299, antiport_PotE, putrescine-ornithine ant 3e-04
TIGR01773452 TIGR01773, GABAperm, gamma-aminobutyrate permease 5e-04
COG0814415 COG0814, SdaC, Amino acid permeases [Amino acid tr 0.003
TIGR04298429 TIGR04298, his_histam_anti, histidine-histamine an 0.004
>gnl|CDD|222193 pfam13520, AA_permease_2, Amino acid permease Back     alignment and domain information 
 Score =  113 bits (285), Expect = 2e-27
 Identities = 96/415 (23%), Positives = 179/415 (43%), Gaps = 26/415 (6%)

Query: 35  LTLIPLIFLIYFEVAGGPYGEEPAVKAAGPLYALLGFMIFPFIWSIPEALITAELSTAFP 94
           L+L+    L+   + G      P + +AG   A+L   I   I+S+  AL+ AELS+AFP
Sbjct: 1   LSLLSAFALVIGSIIGSGIFVTPLIASAGA-AAILWGWIAALIFSLAVALVYAELSSAFP 59

Query: 95  GDGGFVIWADRAFGPFFGSLMGSWKFLSGVINIAAFPVLCIDYLKKVIHP--LESGWPRS 152
            +GG  +W   AFG     +   + +L+ ++ +A+   +   YL     P  + + W   
Sbjct: 60  RNGGIYVWLKNAFGKPVAFIAAWFNWLAYILGLASSSSVAAQYLLSAFFPDLVGNTWLTY 119

Query: 153 LAIMVSTCILSFLNFTGLTIVGYAAVLLGLVS-LSPFIIMSLAAIPKIKPH---RWFSSG 208
              +    I + +N  G+        +LG+V  L P I++ L  +            +S 
Sbjct: 120 GIAIAILIIFALINIRGIKESAKIQNILGIVKLLLPLILIILLGLVLALGGGFNLLPNSW 179

Query: 209 QKGLKKDWNLFFNTL---FWNLNFWDNVSTLAGEVDRPQKTFPVALLVAVIFTCVAYLIP 265
                  W   F  L    W+   +++ + ++ EV   ++  P AL + ++   V YL+ 
Sbjct: 180 TTFFPSGWPGVFLGLLIVLWSFGGFESAANVSEEV--KKRDVPKALFIGLLIVGVLYLLV 237

Query: 266 LFAVIGAVNVDQSQWDSGFHATAA---EMIAGKWLKIWLEVGAVLSAIGLFEAQLSSSAY 322
               +G V  D+    S   + AA   E + G W  I + +   LS +G     + +S+ 
Sbjct: 238 NILFLGVVPDDEIAKLSNLPSVAALLFEAVGGPWGAIIVVILLALSLLGAVNTAIVASSR 297

Query: 323 QILGMADLGFLPKFFGLRSKKFNTPWVGILVSTLITL------GVSYMDFESIVASANFL 376
            +  +A  G LPKFF  +  KF +P   ++++ +++L       +S   + ++++ +   
Sbjct: 298 VLEALARDGVLPKFFA-KVNKFGSPVRALILTAILSLILLLLFLLSGAAYNALLSLSAVG 356

Query: 377 YSLGMLLEFAAFIWLRMKKPQLKRPYRVPMKLPGLVIMCLIPSGFLVVIMVVATK 431
           Y L  LL     + LR K+P L R          + I+ ++   FL+V +     
Sbjct: 357 YLLVYLLLIIGLLILRKKRPDLPRIKGRWP----VAILAILFILFLLVALFFPPG 407

Length = 425
>gnl|CDD|223605 COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|129987 TIGR00909, 2A0306, amino acid transporter Back     alignment and domain information
>gnl|CDD|129986 TIGR00908, 2A0305, ethanolamine permease Back     alignment and domain information
>gnl|CDD|215858 pfam00324, AA_permease, Amino acid permease Back     alignment and domain information
>gnl|CDD|233179 TIGR00911, 2A0308, L-type amino acid transporter Back     alignment and domain information
>gnl|CDD|182613 PRK10644, PRK10644, arginine:agmatin antiporter; Provisional Back     alignment and domain information
>gnl|CDD|163525 TIGR03813, put_Glu_GABA_T, putative glutamate/gamma-aminobutyrate antiporter Back     alignment and domain information
>gnl|CDD|183096 PRK11357, frlA, putative fructoselysine transporter; Provisional Back     alignment and domain information
>gnl|CDD|129983 TIGR00905, 2A0302, transporter, basic amino acid/polyamine antiporter (APA) family Back     alignment and domain information
>gnl|CDD|182297 PRK10197, PRK10197, gamma-aminobutyrate transporter; Provisional Back     alignment and domain information
>gnl|CDD|224038 COG1113, AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|129984 TIGR00906, 2A0303, cationic amino acid transport permease Back     alignment and domain information
>gnl|CDD|129988 TIGR00910, 2A0307_GadC, glutamate:gamma-aminobutyrate antiporter Back     alignment and domain information
>gnl|CDD|223903 COG0833, LysP, Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|213912 TIGR04299, antiport_PotE, putrescine-ornithine antiporter Back     alignment and domain information
>gnl|CDD|233567 TIGR01773, GABAperm, gamma-aminobutyrate permease Back     alignment and domain information
>gnl|CDD|223884 COG0814, SdaC, Amino acid permeases [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|213911 TIGR04298, his_histam_anti, histidine-histamine antiporter Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 471
PRK15049499 L-asparagine permease; Provisional 100.0
TIGR00906557 2A0303 cationic amino acid transport permease. 100.0
PRK10655438 potE putrescine transporter; Provisional 100.0
KOG1287479 consensus Amino acid transporters [Amino acid tran 100.0
TIGR00908442 2A0305 ethanolamine permease. The three genes used 100.0
PRK10644445 arginine:agmatin antiporter; Provisional 100.0
PRK11357445 frlA putative fructoselysine transporter; Provisio 100.0
PRK11387471 S-methylmethionine transporter; Provisional 100.0
TIGR00911501 2A0308 L-type amino acid transporter. 100.0
PRK10746461 putative transport protein YifK; Provisional 100.0
TIGR00905473 2A0302 transporter, basic amino acid/polyamine ant 100.0
PRK10249458 phenylalanine transporter; Provisional 100.0
TIGR00909429 2A0306 amino acid transporter. 100.0
PRK10836489 lysine transporter; Provisional 100.0
PRK10435435 cadB lysine/cadaverine antiporter; Provisional 100.0
TIGR01773452 GABAperm gamma-aminobutyrate permease. GabP is hig 100.0
PRK10238456 aromatic amino acid transporter; Provisional 100.0
PRK11049469 D-alanine/D-serine/glycine permease; Provisional 100.0
PRK10580457 proY putative proline-specific permease; Provision 100.0
TIGR03810468 arg_ornith_anti arginine/ornithine antiporter. Mem 100.0
TIGR00913478 2A0310 amino acid permease (yeast). 100.0
PRK10197446 gamma-aminobutyrate transporter; Provisional 100.0
COG0833541 LysP Amino acid transporters [Amino acid transport 100.0
COG1113462 AnsP Gamma-aminobutyrate permease and related perm 100.0
PRK11021410 putative transporter; Provisional 100.0
TIGR00907482 2A0304 amino acid permease (GABA permease). 100.0
TIGR03428475 ureacarb_perm permease, urea carboxylase system. A 100.0
TIGR03813474 put_Glu_GABA_T putative glutamate/gamma-aminobutyr 100.0
TIGR00910507 2A0307_GadC glutamate:gamma-aminobutyrate antiport 100.0
COG0531466 PotE Amino acid transporters [Amino acid transport 100.0
KOG1289550 consensus Amino acid transporters [Amino acid tran 100.0
TIGR00930 953 2a30 K-Cl cotransporter. 100.0
KOG1286554 consensus Amino acid transporters [Amino acid tran 100.0
PF13520426 AA_permease_2: Amino acid permease; PDB: 3NCY_A 3G 100.0
PRK15238496 inner membrane transporter YjeM; Provisional 100.0
PF00324478 AA_permease: Amino acid permease; InterPro: IPR004 100.0
TIGR00837381 araaP aromatic amino acid transport protein. aroma 99.97
TIGR00912359 2A0309 spore germination protein (amino acid perme 99.91
KOG2082 1075 consensus K+/Cl- cotransporter KCC1 and related tr 99.89
TIGR00796378 livcs branched-chain amino acid uptake carrier. tr 99.89
PRK10483414 tryptophan permease; Provisional 99.88
KOG1288 945 consensus Amino acid transporters [Amino acid tran 99.87
PF03222394 Trp_Tyr_perm: Tryptophan/tyrosine permease family; 99.87
PRK09664415 tryptophan permease TnaB; Provisional 99.86
PRK15132403 tyrosine transporter TyrP; Provisional 99.86
TIGR00814397 stp serine transporter. The HAAAP family includes 99.85
PHA02764399 hypothetical protein; Provisional 99.83
PRK13629443 threonine/serine transporter TdcC; Provisional 99.8
COG0814415 SdaC Amino acid permeases [Amino acid transport an 99.8
KOG2083 643 consensus Na+/K+ symporter [Inorganic ion transpor 99.67
PF03845320 Spore_permease: Spore germination protein; InterPr 99.62
KOG1303437 consensus Amino acid transporters [Amino acid tran 99.5
PF01235416 Na_Ala_symp: Sodium:alanine symporter family; Inte 99.47
KOG1304449 consensus Amino acid transporters [Amino acid tran 99.44
PTZ00206467 amino acid transporter; Provisional 99.39
PLN03074473 auxin influx permease; Provisional 99.34
COG3949349 Uncharacterized membrane protein [Function unknown 99.34
COG1115452 AlsT Na+/alanine symporter [Amino acid transport a 99.3
PRK11375484 allantoin permease; Provisional 99.3
TIGR00835425 agcS amino acid carrier protein. Members of the AG 99.3
PF01490409 Aa_trans: Transmembrane amino acid transporter pro 99.03
PRK11017404 codB cytosine permease; Provisional 99.0
COG1457442 CodB Purine-cytosine permease and related proteins 98.99
PRK09442483 panF sodium/panthothenate symporter; Provisional 98.94
TIGR02119471 panF sodium/pantothenate symporter. Pantothenate ( 98.83
PF05525427 Branch_AA_trans: Branched-chain amino acid transpo 98.65
TIGR00800442 ncs1 NCS1 nucleoside transporter family. The NCS1 98.65
TIGR00813407 sss transporter, SSS family. have different number 98.63
COG1953497 FUI1 Cytosine/uracil/thiamine/allantoin permeases 98.62
KOG1305411 consensus Amino acid transporter protein [Amino ac 98.55
COG0733439 Na+-dependent transporters of the SNF family [Gene 98.54
PRK00701439 manganese transport protein MntH; Reviewed 98.54
PRK15433439 branched-chain amino acid transport system 2 carri 98.5
COG1114431 BrnQ Branched-chain amino acid permeases [Amino ac 98.42
PRK12488549 acetate permease; Provisional 98.37
TIGR02358386 thia_cytX probable hydroxymethylpyrimidine transpo 98.34
COG0591493 PutP Na+/proline symporter [Amino acid transport a 98.33
PRK15419502 proline:sodium symporter PutP; Provisional 98.32
TIGR02121487 Na_Pro_sym sodium/proline symporter. This family c 98.31
PF00474406 SSF: Sodium:solute symporter family; InterPro: IPR 98.27
PF01566358 Nramp: Natural resistance-associated macrophage pr 98.14
TIGR03648552 Na_symport_lg probable sodium:solute symporter, VC 98.11
PF02133440 Transp_cyt_pur: Permease for cytosine/purines, ura 98.07
PRK10484523 putative transporter; Provisional 98.05
TIGR02711549 symport_actP cation/acetate symporter ActP. Member 98.05
COG1914416 MntH Mn2+ and Fe2+ transporters of the NRAMP famil 98.01
PF02705534 K_trans: K+ potassium transporter; InterPro: IPR00 98.0
PRK09395551 actP acetate permease; Provisional 97.95
PLN00149 779 potassium transporter; Provisional 97.46
TIGR00794 688 kup potassium uptake protein. Proteins of the KUP 97.39
KOG4303524 consensus Vesicular inhibitory amino acid transpor 97.28
PLN00148 785 potassium transporter; Provisional 97.21
PRK10745 622 trkD potassium transport protein Kup; Provisional 97.2
PLN00151 852 potassium transporter; Provisional 97.12
PLN00150 779 potassium ion transporter family protein; Provisio 97.05
PF02028485 BCCT: BCCT family transporter; InterPro: IPR000060 96.46
COG3158 627 Kup K+ transporter [Inorganic ion transport and me 96.45
COG4147529 DhlC Predicted symporter [General function predict 96.36
COG4145473 PanF Na+/panthothenate symporter [Coenzyme metabol 95.52
KOG2466572 consensus Uridine permease/thiamine transporter/al 95.45
PF00209523 SNF: Sodium:neurotransmitter symporter family; Int 94.69
PRK09950506 putative transporter; Provisional 94.04
PF1390651 AA_permease_C: C-terminus of AA_permease 93.34
PF02554376 CstA: Carbon starvation protein CstA; InterPro: IP 91.4
PRK03356504 L-carnitine/gamma-butyrobetaine antiporter; Provis 91.25
PRK09928679 choline transport protein BetT; Provisional 91.18
KOG3659629 consensus Sodium-neurotransmitter symporter [Signa 89.6
TIGR01197390 nramp NRAMP (natural resistance-associated macroph 88.31
COG1292537 BetT Choline-glycine betaine transporter [Cell env 85.9
>PRK15049 L-asparagine permease; Provisional Back     alignment and domain information 
Probab=100.00  E-value=7.4e-55  Score=441.56  Aligned_cols=395  Identities=15%  Similarity=0.170  Sum_probs=317.1

Q ss_pred             ccccccccchhHHHHHHHhhcc-cccCChh-HHHhhChHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHH
Q 038994           29 TIKSKKLTLIPLIFLIYFEVAG-GPYGEEP-AVKAAGPLYALLGFMIFPFIWSIPEALITAELSTAFPGDGGFVIWADRA  106 (471)
Q Consensus        29 ~~~~r~l~~~~~~~~~~~~~iG-~~~~~~~-~~~~~G~~~~~~~~~i~~~i~~~~~a~~~~el~~~~p~~Gg~y~~~~~~  106 (471)
                      +++||+++.+++.++++|.++| |+|..++ .+..+||. .+++|++++++ .++.+.+++|+++++|++||.|.|+++.
T Consensus        24 ~~l~r~L~~~~~~~i~~G~~IGsGiF~~~g~~~~~aGp~-~il~~li~~i~-~~~v~~slaELas~~P~aGg~y~y~~~~  101 (499)
T PRK15049         24 EGYHKAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAGPA-LALVYLICGLF-SFFILRALGELVLHRPSSGSFVSYAREF  101 (499)
T ss_pred             hhhhccCCHhHhHHHhhhccccchHHHhhHHHHHhcCCH-HHHHHHHHHHH-HHHHHHHHHHHHHhCCCCCCHHHHHHHH
Confidence            4589999999999999999999 6766655 46668984 57799999985 8889999999999999999999999999


Q ss_pred             hCChhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCChhHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHH
Q 038994          107 FGPFFGSLMGSWKFLSGVINIAAFPVLCIDYLKKVIHPLESGWPRSLAIMVSTCILSFLNFTGLTIVGYAAVLLGLVSLS  186 (471)
Q Consensus       107 ~g~~~g~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  186 (471)
                      +||.+||++||.+++.|....+......+.+...+ +.. +..+.+++.++++++.+.+|++|+|..++++.+++.++++
T Consensus       102 ~G~~~gf~~GW~~~l~~~~~~~~~~~a~~~~~~~~-~~~-~~~~~~~~~~~~~~l~~~iN~~gvk~~~~i~~~~~~iki~  179 (499)
T PRK15049        102 LGEKAAYVAGWMYFINWAMTGIVDITAVALYMHYW-GAF-GGVPQWVFALAALTIVGTMNMIGVKWFAEMEFWFALIKVL  179 (499)
T ss_pred             hCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999998876666666666666543 211 1245667778888899999999999999999999988877


Q ss_pred             HHHHHHHHhhc---cccCC--C---ccccCC--CCCCCchhHH---HHHHHHHhhhhhhhhhhhhhccCCCcchhHHHHH
Q 038994          187 PFIIMSLAAIP---KIKPH--R---WFSSGQ--KGLKKDWNLF---FNTLFWNLNFWDNVSTLAGEVDRPQKTFPVALLV  253 (471)
Q Consensus       187 ~~~~~~~~~~~---~~~~~--~---~~~~~~--~~~~~~~~~~---~~~~~~af~G~e~~~~~~~E~k~p~k~ip~ai~~  253 (471)
                      .++++++.++.   ..++.  +   +.....  +..+.++.++   +...+|+|.|+|.+++++||+|||+||+||++..
T Consensus       180 ~l~~~ii~~i~~~~~~~~~~~~~~~f~~~~~~~~~~p~g~~~~~~~~~~~~faf~G~e~i~~~aeE~knP~r~iPrAi~~  259 (499)
T PRK15049        180 AIVTFLVVGTVFLGSGQPLDGNTTGFHLITDNGGFFPHGLLPALVLIQGVVFAFASIEMVGTAAGECKDPQTMVPKAINS  259 (499)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCcccccccCCCCcccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcChhhHHHHHHHH
Confidence            66665544332   11111  1   111111  1112233333   3357899999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCCcccccccHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCC
Q 038994          254 AVIFTCVAYLIPLFAVIGAVNVDQSQWDSGFHATAAEMIAGKWLKIWLEVGAVLSAIGLFEAQLSSSAYQILGMADLGFL  333 (471)
Q Consensus       254 ~~~~~~~~y~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~sR~l~~~a~d~~l  333 (471)
                      ++..++++|++..+.....+|+++....++|+.+++++.+.+....++.+..+++.+++.++.+++.+|++|+|||||.+
T Consensus       260 ~~~~i~~~yi~~~~~~~~~~p~~~~~~~~sP~~~~~~~~g~~~~~~ii~~~ilia~~ss~ns~~~~~sR~l~a~Ardg~l  339 (499)
T PRK15049        260 VIWRIGLFYVGSVVLLVMLLPWSAYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMAMGGSA  339 (499)
T ss_pred             HHHHHHHHHHHHHHHHheecchhccCcCCCHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            99999999999999999999998887778899999998888888899999999999999999999999999999999999


Q ss_pred             chhhhhccCCCCCcHHHHHHHHHHHHHhhc---c----CHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC---CCCCcc
Q 038994          334 PKFFGLRSKKFNTPWVGILVSTLITLGVSY---M----DFESIVASANFLYSLGMLLEFAAFIWLRMKKPQ---LKRPYR  403 (471)
Q Consensus       334 P~~~~~~~~r~~~P~~a~~~~~~~~~~~~~---~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~  403 (471)
                      |++|+|+|| +++|++|++++.+++.+..+   .    .++.+.++.+....+.|.+.+++.+++||+.++   .++|||
T Consensus       340 P~~f~kv~k-~~~P~~Ail~~~~i~~l~~~l~~~~~~~~f~~l~~~~~~~~li~y~~~~~~~l~~R~~~~~~~~~~~pf~  418 (499)
T PRK15049        340 PSFMAKMSR-QHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIASWAFIIVCQMRLRKAIKEGKAADVSFK  418 (499)
T ss_pred             CHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCc
Confidence            999999995 89999999998887654321   1    277889999999999999999999999876443   357899


Q ss_pred             cCCchhHHHHHHHHhHHHHHHHHHHh
Q 038994          404 VPMKLPGLVIMCLIPSGFLVVIMVVA  429 (471)
Q Consensus       404 ~~~~~~~~~~~~~~~~~~~~~~~~~~  429 (471)
                      .|.+ +...+.+++.+++..+..+..
T Consensus       419 ~~~~-p~~~~~~l~~~~~~~~~~~~~  443 (499)
T PRK15049        419 LPGA-PFTSWLTLLFLLSVLVLMAFD  443 (499)
T ss_pred             ccCc-cHHHHHHHHHHHHHHHHHHHc
Confidence            9986 455555555555555544443

>TIGR00906 2A0303 cationic amino acid transport permease Back     alignment and domain information
>PRK10655 potE putrescine transporter; Provisional Back     alignment and domain information
>KOG1287 consensus Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR00908 2A0305 ethanolamine permease Back     alignment and domain information
>PRK10644 arginine:agmatin antiporter; Provisional Back     alignment and domain information
>PRK11357 frlA putative fructoselysine transporter; Provisional Back     alignment and domain information
>PRK11387 S-methylmethionine transporter; Provisional Back     alignment and domain information
>TIGR00911 2A0308 L-type amino acid transporter Back     alignment and domain information
>PRK10746 putative transport protein YifK; Provisional Back     alignment and domain information
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family Back     alignment and domain information
>PRK10249 phenylalanine transporter; Provisional Back     alignment and domain information
>TIGR00909 2A0306 amino acid transporter Back     alignment and domain information
>PRK10836 lysine transporter; Provisional Back     alignment and domain information
>PRK10435 cadB lysine/cadaverine antiporter; Provisional Back     alignment and domain information
>TIGR01773 GABAperm gamma-aminobutyrate permease Back     alignment and domain information
>PRK10238 aromatic amino acid transporter; Provisional Back     alignment and domain information
>PRK11049 D-alanine/D-serine/glycine permease; Provisional Back     alignment and domain information
>PRK10580 proY putative proline-specific permease; Provisional Back     alignment and domain information
>TIGR03810 arg_ornith_anti arginine/ornithine antiporter Back     alignment and domain information
>TIGR00913 2A0310 amino acid permease (yeast) Back     alignment and domain information
>PRK10197 gamma-aminobutyrate transporter; Provisional Back     alignment and domain information
>COG0833 LysP Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>COG1113 AnsP Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism] Back     alignment and domain information
>PRK11021 putative transporter; Provisional Back     alignment and domain information
>TIGR00907 2A0304 amino acid permease (GABA permease) Back     alignment and domain information
>TIGR03428 ureacarb_perm permease, urea carboxylase system Back     alignment and domain information
>TIGR03813 put_Glu_GABA_T putative glutamate/gamma-aminobutyrate antiporter Back     alignment and domain information
>TIGR00910 2A0307_GadC glutamate:gamma-aminobutyrate antiporter Back     alignment and domain information
>COG0531 PotE Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>KOG1289 consensus Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR00930 2a30 K-Cl cotransporter Back     alignment and domain information
>KOG1286 consensus Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>PF13520 AA_permease_2: Amino acid permease; PDB: 3NCY_A 3GI8_C 3GIA_A 3GI9_C 3OB6_A 3L1L_A 3LRC_D 3LRB_B 4DJK_A 4DJI_A Back     alignment and domain information
>PRK15238 inner membrane transporter YjeM; Provisional Back     alignment and domain information
>PF00324 AA_permease: Amino acid permease; InterPro: IPR004841 Amino acid permeases are integral membrane proteins involved in the transport of amino acids into the cell Back     alignment and domain information
>TIGR00837 araaP aromatic amino acid transport protein Back     alignment and domain information
>TIGR00912 2A0309 spore germination protein (amino acid permease) Back     alignment and domain information
>KOG2082 consensus K+/Cl- cotransporter KCC1 and related transporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00796 livcs branched-chain amino acid uptake carrier Back     alignment and domain information
>PRK10483 tryptophan permease; Provisional Back     alignment and domain information
>KOG1288 consensus Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>PF03222 Trp_Tyr_perm: Tryptophan/tyrosine permease family; InterPro: IPR018227 Amino acid permeases are integral membrane proteins involved in the transport of amino acids into the cell Back     alignment and domain information
>PRK09664 tryptophan permease TnaB; Provisional Back     alignment and domain information
>PRK15132 tyrosine transporter TyrP; Provisional Back     alignment and domain information
>TIGR00814 stp serine transporter Back     alignment and domain information
>PHA02764 hypothetical protein; Provisional Back     alignment and domain information
>PRK13629 threonine/serine transporter TdcC; Provisional Back     alignment and domain information
>COG0814 SdaC Amino acid permeases [Amino acid transport and metabolism] Back     alignment and domain information
>KOG2083 consensus Na+/K+ symporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF03845 Spore_permease: Spore germination protein; InterPro: IPR004761 Amino acid permeases are integral membrane proteins involved in the transport of amino acids into the cell Back     alignment and domain information
>KOG1303 consensus Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>PF01235 Na_Ala_symp: Sodium:alanine symporter family; InterPro: IPR001463 Sodium symporters can be divided by sequence and functional similarity into various groups Back     alignment and domain information
>KOG1304 consensus Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>PTZ00206 amino acid transporter; Provisional Back     alignment and domain information
>PLN03074 auxin influx permease; Provisional Back     alignment and domain information
>COG3949 Uncharacterized membrane protein [Function unknown] Back     alignment and domain information
>COG1115 AlsT Na+/alanine symporter [Amino acid transport and metabolism] Back     alignment and domain information
>PRK11375 allantoin permease; Provisional Back     alignment and domain information
>TIGR00835 agcS amino acid carrier protein Back     alignment and domain information
>PF01490 Aa_trans: Transmembrane amino acid transporter protein; InterPro: IPR013057 This transmembrane region is found in many amino acid transporters including P34579 from SWISSPROT (UNC-47) and P40501 from SWISSPROT (MTR) Back     alignment and domain information
>PRK11017 codB cytosine permease; Provisional Back     alignment and domain information
>COG1457 CodB Purine-cytosine permease and related proteins [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK09442 panF sodium/panthothenate symporter; Provisional Back     alignment and domain information
>TIGR02119 panF sodium/pantothenate symporter Back     alignment and domain information
>PF05525 Branch_AA_trans: Branched-chain amino acid transport protein; InterPro: IPR004685 Characterised members of the branched chain Amino Acid:Cation Symporter (LIVCS) family transport all three of the branched chain aliphatic amino acids (leucine (L), isoleucine (I) and valine (V)) Back     alignment and domain information
>TIGR00800 ncs1 NCS1 nucleoside transporter family Back     alignment and domain information
>TIGR00813 sss transporter, SSS family Back     alignment and domain information
>COG1953 FUI1 Cytosine/uracil/thiamine/allantoin permeases [Nucleotide transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>KOG1305 consensus Amino acid transporter protein [Amino acid transport and metabolism] Back     alignment and domain information
>COG0733 Na+-dependent transporters of the SNF family [General function prediction only] Back     alignment and domain information
>PRK00701 manganese transport protein MntH; Reviewed Back     alignment and domain information
>PRK15433 branched-chain amino acid transport system 2 carrier protein BrnQ; Provisional Back     alignment and domain information
>COG1114 BrnQ Branched-chain amino acid permeases [Amino acid transport and metabolism] Back     alignment and domain information
>PRK12488 acetate permease; Provisional Back     alignment and domain information
>TIGR02358 thia_cytX probable hydroxymethylpyrimidine transporter CytX Back     alignment and domain information
>COG0591 PutP Na+/proline symporter [Amino acid transport and metabolism / General function prediction only] Back     alignment and domain information
>PRK15419 proline:sodium symporter PutP; Provisional Back     alignment and domain information
>TIGR02121 Na_Pro_sym sodium/proline symporter Back     alignment and domain information
>PF00474 SSF: Sodium:solute symporter family; InterPro: IPR001734 Sodium/substrate symport (or co-transport) is a widespread mechanism of solute transport across cytoplasmic membranes of pro- and eukaryotic cells Back     alignment and domain information
>PF01566 Nramp: Natural resistance-associated macrophage protein; InterPro: IPR001046 The natural resistance-associated macrophage protein (NRAMP) family consists of Nramp1, Nramp2, and yeast proteins Smf1 and Smf2 Back     alignment and domain information
>TIGR03648 Na_symport_lg probable sodium:solute symporter, VC_2705 subfamily Back     alignment and domain information
>PF02133 Transp_cyt_pur: Permease for cytosine/purines, uracil, thiamine, allantoin; InterPro: IPR001248 The Nucleobase Cation Symporter-1 (NCS1) family consists of bacterial and yeast transporters for nucleobases including purines and pyrimidines Back     alignment and domain information
>PRK10484 putative transporter; Provisional Back     alignment and domain information
>TIGR02711 symport_actP cation/acetate symporter ActP Back     alignment and domain information
>COG1914 MntH Mn2+ and Fe2+ transporters of the NRAMP family [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members Back     alignment and domain information
>PRK09395 actP acetate permease; Provisional Back     alignment and domain information
>PLN00149 potassium transporter; Provisional Back     alignment and domain information
>TIGR00794 kup potassium uptake protein Back     alignment and domain information
>KOG4303 consensus Vesicular inhibitory amino acid transporter [Amino acid transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>PLN00148 potassium transporter; Provisional Back     alignment and domain information
>PRK10745 trkD potassium transport protein Kup; Provisional Back     alignment and domain information
>PLN00151 potassium transporter; Provisional Back     alignment and domain information
>PLN00150 potassium ion transporter family protein; Provisional Back     alignment and domain information
>PF02028 BCCT: BCCT family transporter; InterPro: IPR000060 These prokaryotic transport proteins belong to a family known as BCCT (for Betaine / Carnitine / Choline Transporters) and are specific for compounds containing a quaternary nitrogen atom Back     alignment and domain information
>COG3158 Kup K+ transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG4147 DhlC Predicted symporter [General function prediction only] Back     alignment and domain information
>COG4145 PanF Na+/panthothenate symporter [Coenzyme metabolism] Back     alignment and domain information
>KOG2466 consensus Uridine permease/thiamine transporter/allantoin transport [Nucleotide transport and metabolism; Coenzyme transport and metabolism] Back     alignment and domain information
>PF00209 SNF: Sodium:neurotransmitter symporter family; InterPro: IPR000175 Neurotransmitter transport systems are integral to the release, re-uptake and recycling of neurotransmitters at synapses Back     alignment and domain information
>PRK09950 putative transporter; Provisional Back     alignment and domain information
>PF13906 AA_permease_C: C-terminus of AA_permease Back     alignment and domain information
>PF02554 CstA: Carbon starvation protein CstA; InterPro: IPR003706 Escherichia coli induces the synthesis of at least 30 proteins at the onset of carbon starvation, two-thirds of which are positively regulated by the cyclic AMP (cAMP) and cAMP receptor protein (CRP) complex Back     alignment and domain information
>PRK03356 L-carnitine/gamma-butyrobetaine antiporter; Provisional Back     alignment and domain information
>PRK09928 choline transport protein BetT; Provisional Back     alignment and domain information
>KOG3659 consensus Sodium-neurotransmitter symporter [Signal transduction mechanisms] Back     alignment and domain information
>TIGR01197 nramp NRAMP (natural resistance-associated macrophage protein) metal ion transporters Back     alignment and domain information
>COG1292 BetT Choline-glycine betaine transporter [Cell envelope biogenesis, outer membrane] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query471
3l1l_A445 Structure Of Arg-Bound Escherichia Coli Adic Length 9e-06
3ncy_A445 X-Ray Crystal Structure Of An Arginine Agmatine Ant 1e-05
3ob6_A445 Structure Of Adic(N101a) In The Open-To-Out Arg+ Bo 2e-04
3lrb_A445 Structure Of E. Coli Adic Length = 445 2e-04
>pdb|3L1L|A Chain A, Structure Of Arg-Bound Escherichia Coli Adic Length = 445 Back     alignment and structure 
Iteration: 1

 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 63/282 (22%), Positives = 108/282 (38%), Gaps = 7/282 (2%)
Query: 83  ALITAELSTAFPGDGGFVIWADRAFGPFFGSLMGSWKFLSGVINIAAFPVLCIDYLKKVI 142
           +++ A++S   P  GG   +A R FGPF G       +L+  I   A  V+ + YL    
Sbjct: 57  SMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFF 116
Query: 143 HPLESGWPRSLAIMVSTCILSFLNFTGLTIVGYAAVLLGLVSLSPFIIMSLAA----IPK 198
             L+  W  ++  +V   I   LN  G  ++     +  +++L P + +++        +
Sbjct: 117 PILKDPWVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFRGE 176
Query: 199 IKPHRWFSSGQKGLKKDXXXXXXXXXXXXXXXDNVSTLAGEVDRPQKTFPVALLVAVIFT 258
                W  SG  G                   ++ S  AG V  P++  P+A +  V+  
Sbjct: 177 TYMAAWNVSGL-GTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIA 235
Query: 259 CVAYLIPLFAVIGAVNVDQSQWDSGFHATAAEMIAGKWLKIWLEVGAVLSAIGLFEAQLS 318
            V Y++   A++G +     +  +     AA M  G      +   A    +G       
Sbjct: 236 AVCYVLSTTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTL 295
Query: 319 SSAYQILGMADLGFLPKFFGLRSKKFNTPWVG-ILVSTLITL 359
            +       AD G  P  F  R  K  TP  G I+V  L+T+
Sbjct: 296 LAGQTAKAAADDGLFPPIFA-RVNKAGTPVAGLIIVGILMTI 336
>pdb|3NCY|A Chain A, X-Ray Crystal Structure Of An Arginine Agmatine Antiporter (Adic) In Complex With A Fab Fragment Length = 445 Back     alignment and structure
>pdb|3OB6|A Chain A, Structure Of Adic(N101a) In The Open-To-Out Arg+ Bound Conformation Length = 445 Back     alignment and structure
>pdb|3LRB|A Chain A, Structure Of E. Coli Adic Length = 445 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query471
4djk_A511 Probable glutamate/gamma-aminobutyrate antiporter; 2e-46
3l1l_A445 Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC 2e-36
3gia_A444 Uncharacterized protein MJ0609; membrane protein, 3e-25
>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A Length = 511 Back     alignment and structure
 Score =  167 bits (425), Expect = 2e-46
 Identities = 78/446 (17%), Positives = 159/446 (35%), Gaps = 31/446 (6%)

Query: 29  TIKSKKLTLIPLIFLIYFEVAGGPYGEEPAVKAAGPLYALLGFMIFPFIWSIPEALITAE 88
           T K+K+LTL+    +    V      E P    +G    +   ++   +W IP  L  AE
Sbjct: 7   TGKAKQLTLLGFFAITASMVMA--VYEYPTFATSGFS-LVFFLLLGGILWFIPVGLCAAE 63

Query: 89  LSTAFP-GDGGFVIWADRAFGPFFGSLMGSWKFLS---GVINIAAFPVLCIDYLKKVIHP 144
           ++T     +GG   W     GP +G    S+ +L    G I +  F +  + Y+ K    
Sbjct: 64  MATVDGWEEGGVFAWVSNTLGPRWGFAAISFGYLQIAIGFIPMLYFVLGALSYILKWPAL 123

Query: 145 LESGWPRSLAIMVSTCILSFLNFTGLTIVGY-AAVLLGLVSLSPFIIMSLAAIPKIKPHR 203
            E    +++A ++    L+   F G       A V      L P  I+   A   +    
Sbjct: 124 NEDPITKTIAALIILWALALTQFGGTKYTARIAKVGFFAGILLPAFILIALAAIYLHSGA 183

Query: 204 WF-------SSGQKGLKKDWNLFFNTLFWNLNFWDNVSTLAGEVDRPQKTFPVALLVAVI 256
                    +      K    + F     +    +  +T   E+  P + +P+A+L+ ++
Sbjct: 184 PVAIEMDSKTFFPDFSKVGTLVVFVAFILSYMGVEASATHVNEMSNPGRDYPLAMLLLMV 243

Query: 257 FTCVAYLIPLFAVIGAVNVDQSQWDSGFHATAAEMIA-----GKWLKIWLEVGAVLSAIG 311
                  +   ++   +  ++    +G   T   +++      +W    +    +L  + 
Sbjct: 244 AAICLSSVGGLSIAMVIPGNEINLSAGVMQTFTVLMSHVAPEIEWTVRVISALLLLGVLA 303

Query: 312 LFEAQLSSSAYQILGMADLGFLPKFFGLRSKKFNTPWVGILVSTLIT----------LGV 361
              + +   +  +   A    LP  F  +  K   P   ++   +IT           G 
Sbjct: 304 EIASWIVGPSRGMYVTAQKNLLPAAFA-KMNKNGVPVTLVISQLVITSIALIILTNTGGG 362

Query: 362 SYMDFESIVASANFLYSLGMLLEFAAFIWLRMKKPQLKRPYRVPMKLPGLVIMCLIPSGF 421
           + M F   +A    +Y     + F  +I L +K P LKR + +P      +++ ++    
Sbjct: 363 NNMSFLIALALTVVIYLCAYFMLFIGYIVLVLKHPDLKRTFNIPGGKGVKLVVAIVGLLT 422

Query: 422 LVVIMVVATKIVYLVSGLMTLGAIGW 447
            ++  +V+      + G  T   +  
Sbjct: 423 SIMAFIVSFLPPDNIQGDSTDMYVEL 448
>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A Length = 445 Back     alignment and structure
>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C Length = 444 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query471
3l1l_A445 Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC 100.0
3gia_A444 Uncharacterized protein MJ0609; membrane protein, 100.0
4djk_A511 Probable glutamate/gamma-aminobutyrate antiporter; 100.0
2jln_A501 MHP1; hydantoin, transporter, membrane protein, nu 99.41
3dh4_A530 Sodium/glucose cotransporter; membrane protein, sy 98.45
2xq2_A593 Sodium/glucose cotransporter; transport protein, i 98.44
2a65_A519 Leutaa, Na(+):neurotransmitter symporter (SNF fami 98.12
3gia_A444 Uncharacterized protein MJ0609; membrane protein, 93.63
>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A Back     alignment and structure
Probab=100.00  E-value=2.3e-53  Score=428.39  Aligned_cols=418  Identities=19%  Similarity=0.273  Sum_probs=351.6

Q ss_pred             ccccccccchhHHHHHHHhhcc-cccCChhHHHhhChHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHh
Q 038994           29 TIKSKKLTLIPLIFLIYFEVAG-GPYGEEPAVKAAGPLYALLGFMIFPFIWSIPEALITAELSTAFPGDGGFVIWADRAF  107 (471)
Q Consensus        29 ~~~~r~l~~~~~~~~~~~~~iG-~~~~~~~~~~~~G~~~~~~~~~i~~~i~~~~~a~~~~el~~~~p~~Gg~y~~~~~~~  107 (471)
                      ++++|+++++++.++.+++++| |++..+..+..+||. .+++|++++++ .++.+++|+|+++++|++||.|.|+++.+
T Consensus         4 ~~~~r~l~~~~~~~l~ig~~iG~Gif~~~~~~~~~G~~-~~~~~li~~~~-~~~~a~~~~el~~~~p~~Gg~y~~~~~~~   81 (445)
T 3l1l_A            4 DADAHKVGLIPVTLMVSGAIMGSGVFLLPANLASTGGI-AIYGWLVTIIG-ALGLSMVYAKMSFLDPSPGGSYAYARRCF   81 (445)
T ss_dssp             ---CCCBCHHHHHHHHHHHHCSSHHHHHHHHHHHHCTH-HHHHHHHHHHH-HHHHHHHHHHHHHHCCCTTTHHHHHHHHS
T ss_pred             CCCCCcccHHHHHHHHHHhHHhhhHHhhHHHHHHhhhH-HHHHHHHHHHH-HHHHHHHHHHHHccCCCCCCchhhHHhHc
Confidence            4568999999999999999999 678888777778884 67889998885 88899999999999999999999999999


Q ss_pred             CChhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCChhHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHH
Q 038994          108 GPFFGSLMGSWKFLSGVINIAAFPVLCIDYLKKVIHPLESGWPRSLAIMVSTCILSFLNFTGLTIVGYAAVLLGLVSLSP  187 (471)
Q Consensus       108 g~~~g~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  187 (471)
                      ||.+|+..||.+++.+....+......+++++.++|...++++..++++++.++.+.+|++|+|..++++.+.+.++++.
T Consensus        82 G~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~g~~~~~~~~~~~~~~~i~~  161 (445)
T 3l1l_A           82 GPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKDPWVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIP  161 (445)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCGGGGSHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccccccHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHH
Confidence            99999999999999999888888999999998888865556788889999999999999999999999999999999988


Q ss_pred             HHHHHHHhhccccCCCcccc-CCCC--CCCchhHHHHHHHHHhhhhhhhhhhhhhccCCCcchhHHHHHHHHHHHHHHHH
Q 038994          188 FIIMSLAAIPKIKPHRWFSS-GQKG--LKKDWNLFFNTLFWNLNFWDNVSTLAGEVDRPQKTFPVALLVAVIFTCVAYLI  264 (471)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~af~G~e~~~~~~~E~k~p~k~ip~ai~~~~~~~~~~y~l  264 (471)
                      ++++++.++...+++++.+. .+.+  ...++...+...+|+|.|+|..++++||+|||+|++||++..+..+++++|++
T Consensus       162 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~af~G~e~~~~~~~e~k~p~r~ip~a~~~~~~~~~~~y~~  241 (445)
T 3l1l_A          162 IVGIAVFGWFWFRGETYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVL  241 (445)
T ss_dssp             HHHHHHTTSTTCCCCCCCCC-----------HHHHHHHHHHTTTTTTHHHHGGGGBSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhChhhcccccCccCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCccccccHHHHHHHHHHHHHHHH
Confidence            88887777666555443221 1111  01233444556789999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcccCCcccccccHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCchhhhhccCCC
Q 038994          265 PLFAVIGAVNVDQSQWDSGFHATAAEMIAGKWLKIWLEVGAVLSAIGLFEAQLSSSAYQILGMADLGFLPKFFGLRSKKF  344 (471)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~sR~l~~~a~d~~lP~~~~~~~~r~  344 (471)
                      ..++.....|+++...++.|+.+++++..+++...++.+..+++.+++.++.+++.+|.+++|+|||.+|++|+|+|| +
T Consensus       242 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~sR~~~~~a~dg~lP~~~~~~~~-~  320 (445)
T 3l1l_A          242 STTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNK-A  320 (445)
T ss_dssp             HHHHHHHHSCTTTSCSTTCTHHHHHHHHHCTTHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTTSSCGGGGCCCT-T
T ss_pred             HHHHHHhcCCHHHHhccCcHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHhcCC-C
Confidence            999999999998888788899999999998988899999999999999999999999999999999999999999997 7


Q ss_pred             CCcHHHHHHHHHHHHHhhcc--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCcccCCchhHHHHHHH
Q 038994          345 NTPWVGILVSTLITLGVSYM--------DFESIVASANFLYSLGMLLEFAAFIWLRMKKPQLKRPYRVPMKLPGLVIMCL  416 (471)
Q Consensus       345 ~~P~~a~~~~~~~~~~~~~~--------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  416 (471)
                      ++|+++++++.+++.++.+.        .++.+.++.++...+.|.+.+++.+++|+|+| .+   |.|..    .+...
T Consensus       321 ~~P~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~y~~~~~~~~~~r~~~~-~~---r~~~~----~~~~~  392 (445)
T 3l1l_A          321 GTPVAGLIIVGILMTIFQLSSISPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHF-GK---ARPAY----LAVTT  392 (445)
T ss_dssp             CCCHHHHHHHHHHHHHHHHSTTSHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHSSSS-GG---GCTTT----HHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc-cc---ccchh----HHHHH
Confidence            99999999999877665532        36889999999999999999999999988776 22   33433    23344


Q ss_pred             HhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 038994          417 IPSGFLVVIMVVATKIVYLVSGLMTLGAIGWYFFMKFLKSK  457 (471)
Q Consensus       417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  457 (471)
                      +..+++++..+..++.....+..++++|+.+|.+.++++++
T Consensus       393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~~~~~~~~~  433 (445)
T 3l1l_A          393 IAFLYCIWAVVGSGAKEVMWSFVTLMVITAMYALNYNRLHK  433 (445)
T ss_dssp             HHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHSTTCC
T ss_pred             HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence            44556666666778888888999999999999877654443
>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C Back     alignment and structure
>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A Back     alignment and structure
>2jln_A MHP1; hydantoin, transporter, membrane protein, nucleobase-cation-symport-1 family; 2.85A {Microbacterium liquefaciens} PDB: 2jlo_A* 2x79_A Back     alignment and structure
>3dh4_A Sodium/glucose cotransporter; membrane protein, symporter, sugar transport, SGLT, ION TRAN membrane, sodium transport, symport; HET: GAL; 2.70A {Vibrio parahaemolyticus} Back     alignment and structure
>2xq2_A Sodium/glucose cotransporter; transport protein, inverted repeats, LEUT-fold, galactose; 2.73A {Vibrio parahaemolyticus} PDB: 2xq2_B 2kpe_A Back     alignment and structure
>2a65_A Leutaa, Na(+):neurotransmitter symporter (SNF family); membrane protein, transport protein; HET: BOG; 1.65A {Aquifex aeolicus} SCOP: f.54.1.1 PDB: 2q6h_A* 2q72_A* 2qb4_A* 2qei_A* 3f3a_A* 3f3c_A* 3f3d_A* 3f3e_A* 3f48_A* 3f4i_A* 3f4j_A* 3usg_A* 3usi_A 3usj_A 3usk_A 3usl_A* 3usm_A* 3uso_A 3usp_A* 3qs5_A* ... Back     alignment and structure
>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query471
d2a65a1509 Na(+):neurotransmitter symporter homologue LeuT {A 97.15
>d2a65a1 f.54.1.1 (A:5-513) Na(+):neurotransmitter symporter homologue LeuT {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: SNF-like
superfamily: SNF-like
family: SNF-like
domain: Na(+):neurotransmitter symporter homologue LeuT
species: Aquifex aeolicus [TaxId: 63363]

Probab=97.15  E-value=0.12  Score=49.50  Aligned_cols=52  Identities=15%  Similarity=0.100  Sum_probs=33.6

Q ss_pred             chhHHHHHHHhhcc--cccCChhHHHhhChHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 038994           37 LIPLIFLIYFEVAG--GPYGEEPAVKAAGPLYALLGFMIFPFIWSIPEALITAELS   90 (471)
Q Consensus        37 ~~~~~~~~~~~~iG--~~~~~~~~~~~~G~~~~~~~~~i~~~i~~~~~a~~~~el~   90 (471)
                      ..+.+.-.+|..+|  .+.-.|.-....|....++.+++..+++.+|..  +.|++
T Consensus         7 ~~~fila~~g~avGlGNiWrFPyl~~~nGGgaFlipY~~~l~l~gvPll--~lE~~   60 (509)
T d2a65a1           7 RLGLILAMAGNAVGLGNFLRFPVQAAENGGGAFMIPYIIAFLLVGIPLM--WIEWA   60 (509)
T ss_dssp             HHHHHHHHHHHHSSHHHHTHHHHHHHHTTTHHHHHHHHHHHHHTHHHHH--HHHHH
T ss_pred             hHHHHHHHHHHHhcccHHHhhhHHHHhcCCchhHHHHHHHHHHHHHHHH--HHHHH
Confidence            35566666677777  366778777665555677778777766676544  36653