Citrus Sinensis ID: 039047

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-----
MGLLFYLYLLPSLYLMFKIWKWVDEKRDKECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQTYSPRIMFAGREDNPTLQDGIDEMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVWEVVRDLDGNVGNVWKDIIDSYPPQSLANPYLEKYGWIQNEDISTFKVPENYLN
ccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEccccccccccccHHHHHHHHHHcccccccHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEccccccccHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHccccEEEEEEEEcccccccccccccHHHHHcccccccEEEEEEEcccccccHHcccccEEEEcccccccccccccccccccccccEEccccccccccccccccccccccEEcccHHHHHHHHHHHHHHHHcccccHHHHccccccccccEEEEccccHHHHHHHHHHccccccccHHHHHHHHHHccccccHHHHHHHHHHHccccccccEEEEEEcccccHHHHEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccc
ccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEcccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHccccccccccHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEcccccccccHHHHHHHHccccccEEEEEcccccccHHHHHHHHHHHHHHHccccEEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHEEHHHHHHccccccccccEEEEEEcccccEEEEccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHEEcccHHHHHHHHHHHccccHHcccHcHccHHHHcEcHHHHHHHHHHHHHHccccccccEEEEEEEEcccEEEEEEHHHHcccccccccccHHHHcccccccccccHHHHcccccccccccEEccccccc
MGLLFYLYLLPSLYLMFKIWKWVdekrdkecyildyqcykptddrmvstDFAGQVIKRTKNLGLNEYKFLLKAIVSsgigeqtysprimfagrednptlqdGIDEMEEFFEDSIAKILdrsgispkeIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFnltgmgcsaslISVDIVRSVFKTYKNMNAMVVTSeslspnwysgndrsMILANCLFRSGGAVILLSNKRSLERNALFKLKCLVrthhgarddsygccvqtedeqgrpgfhlgknlpkaaTRAFVDNlrvispmiLPIRELLRYALVTFVRKmsnntpkgekkagvnfrtgvdhfcihtggkavidgigfsldlteydleparmtlhrfgntSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVWEVVRDLDGNVGNVWKDiidsyppqslanpylekygwiqnedistfkvpenyln
MGLLFYLYLLPSLYLMFKIWKWVDEKRDKECYILDYqcykptddrmVSTDFAGQVIKrtknlglneYKFLLKAIVSSGIGEQTYSPRIMFAGREDNPTLQDGIDEMEEFFEDSIAKildrsgispkEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNltgmgcsaslISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFVRkmsnntpkgekkagvnFRTGVDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVWEVVRDLDGNVGNVWKDIIDSYPPQSLANPYLEKYGWIQNedistfkvpenyln
MGllfylyllpslylMFKIWKWVDEKRDKECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQTYSPRIMFAGREDNPTLQDGIDEMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVWEVVRDLDGNVGNVWKDIIDSYPPQSLANPYLEKYGWIQNEDISTFKVPENYLN
**LLFYLYLLPSLYLMFKIWKWVDEKRDKECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQTYSPRIMFAG*********GIDEMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFVRKM**********AGVNFRTGVDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVWEVVRDLDGNVGNVWKDIIDSYPPQSLANPYLEKYGWIQNEDISTFK*******
*GLLFYLYLLPSLYLMFKIWKWVDEKRDKECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQTYSPRIMFAGREDNPTLQDGIDEMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRS*****LF***CLVRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLPK****AFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVWEVVRDLDGNVGNVWKDIIDSYPPQSLANPYLEKYGWIQNEDISTFKVPENYL*
MGLLFYLYLLPSLYLMFKIWKWVDEKRDKECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQTYSPRIMFAGREDNPTLQDGIDEMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVWEVVRDLDGNVGNVWKDIIDSYPPQSLANPYLEKYGWIQNEDISTFKVPENYLN
*GLLFYLYLLPSLYLMFKIWKWVDEKRDKECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQTYSPRIMFAGREDNPTLQDGIDEMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVWEVVRDLDGNVGNVWKDIIDSYPPQSLANPYLEKYGWIQNEDISTFKVP**Y**
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MGLLFYLYLLPSLYLMFKIWKWVDEKRDKECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQTYSPRIMFAGREDNPTLQDGIDEMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVWEVVRDLDGNVGNVWKDIIDSYPPQSLANPYLEKYGWIQNEDISTFKVPENYLN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query465 2.2.26 [Sep-21-2011]
Q9SIB2476 3-ketoacyl-CoA synthase 1 yes no 0.961 0.939 0.729 0.0
Q9LQP8478 3-ketoacyl-CoA synthase 3 no no 0.969 0.943 0.707 0.0
Q9LZ72464 3-ketoacyl-CoA synthase 2 no no 0.950 0.952 0.530 1e-144
Q9MAM3528 3-ketoacyl-CoA synthase 1 no no 0.888 0.782 0.420 1e-96
Q9ZUZ0466 3-ketoacyl-CoA synthase 1 no no 0.858 0.856 0.413 2e-94
Q9C6L5492 3-ketoacyl-CoA synthase 5 no no 0.907 0.857 0.420 6e-94
Q9SIX1512 3-ketoacyl-CoA synthase 9 no no 0.868 0.789 0.401 2e-92
Q9FG87529 3-ketoacyl-CoA synthase 1 no no 0.868 0.763 0.427 3e-92
Q9XF43497 3-ketoacyl-CoA synthase 6 no no 0.888 0.830 0.410 7e-92
O65677487 Probable 3-ketoacyl-CoA s no no 0.870 0.831 0.411 2e-91
>sp|Q9SIB2|KCS12_ARATH 3-ketoacyl-CoA synthase 12 OS=Arabidopsis thaliana GN=KCS12 PE=2 SV=1 Back     alignment and function desciption
 Score =  711 bits (1835), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/459 (72%), Positives = 394/459 (85%), Gaps = 12/459 (2%)

Query: 18  KIWKWVDEKRDKECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSS 77
           KIWK +D K+DK+CYILDYQC+KPTDDRMVST F+G++I R +NLGL EYKFLLKAIVSS
Sbjct: 18  KIWKLIDSKQDKDCYILDYQCHKPTDDRMVSTQFSGEIIYRNQNLGLTEYKFLLKAIVSS 77

Query: 78  GIGEQTYSPRIMFAGREDNPTLQDGIDEMEEFFEDSIAKILDRSGISPKEIDILVVNISM 137
           GIGEQTY+PR++F GRE+ P+LQDGI EMEEF+ DSI K+L+R+ ISPK+IDILVVN+SM
Sbjct: 78  GIGEQTYAPRLVFEGREERPSLQDGISEMEEFYVDSIGKLLERNQISPKDIDILVVNVSM 137

Query: 138 IAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSES 197
           ++  PSL+SRIIN YKMR D+KVFNLTGMGCSASLISVDIV+++FK+Y N  A+V TSES
Sbjct: 138 LSSTPSLASRIINHYKMRDDVKVFNLTGMGCSASLISVDIVKNIFKSYANKLALVATSES 197

Query: 198 LSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRTHHGARDDSYGC 257
           LSPNWYSGN+RSMILANCLFRSGG  ILL+NKRSL + A+FKLKC+VRTHHGAR++SY C
Sbjct: 198 LSPNWYSGNNRSMILANCLFRSGGCAILLTNKRSLRKKAMFKLKCMVRTHHGAREESYNC 257

Query: 258 CVQTEDEQGRPGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFV------- 310
           C+Q EDEQGR GF+LGKNLPKAATRAFV+NL+VI+P ILP+ EL+R+ L   +       
Sbjct: 258 CIQAEDEQGRVGFYLGKNLPKAATRAFVENLKVITPKILPVTELIRFMLKLLIKKIKIRQ 317

Query: 311 --RKMSNNTPKGEK-KAGVNFRTGVDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLH 367
              K S N P G   KAG+NF+TG++HFCIHTGGKAVIDGIG SLDL EYD+EPARMTLH
Sbjct: 318 NPSKGSTNLPPGTPLKAGINFKTGIEHFCIHTGGKAVIDGIGHSLDLNEYDIEPARMTLH 377

Query: 368 RFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVWEVVRDLDG--NVGNV 425
           RFGNTSA+SLWYVLAYMEAKKRLK+GDRV MISFGAGFKCNSCVWEVVRDL G  + GNV
Sbjct: 378 RFGNTSASSLWYVLAYMEAKKRLKRGDRVFMISFGAGFKCNSCVWEVVRDLTGGESKGNV 437

Query: 426 WKDIIDSYPPQSLANPYLEKYGWIQNEDISTFKVPENYL 464
           W   ID YPP+S+ NPYLEK+GWIQ+ED  TFKVP+ ++
Sbjct: 438 WNHCIDDYPPKSILNPYLEKFGWIQDEDPDTFKVPDAFM 476

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: -
>sp|Q9LQP8|KCS3_ARATH 3-ketoacyl-CoA synthase 3 OS=Arabidopsis thaliana GN=KCS3 PE=2 SV=3 Back     alignment and function description
>sp|Q9LZ72|KCS21_ARATH 3-ketoacyl-CoA synthase 21 OS=Arabidopsis thaliana GN=KCS21 PE=2 SV=1 Back     alignment and function description
>sp|Q9MAM3|KCS1_ARATH 3-ketoacyl-CoA synthase 1 OS=Arabidopsis thaliana GN=KCS1 PE=2 SV=1 Back     alignment and function description
>sp|Q9ZUZ0|KCS13_ARATH 3-ketoacyl-CoA synthase 13 OS=Arabidopsis thaliana GN=HIC PE=2 SV=1 Back     alignment and function description
>sp|Q9C6L5|KCS5_ARATH 3-ketoacyl-CoA synthase 5 OS=Arabidopsis thaliana GN=KCS5 PE=1 SV=1 Back     alignment and function description
>sp|Q9SIX1|KCS9_ARATH 3-ketoacyl-CoA synthase 9 OS=Arabidopsis thaliana GN=KCS9 PE=2 SV=1 Back     alignment and function description
>sp|Q9FG87|KCS19_ARATH 3-ketoacyl-CoA synthase 19 OS=Arabidopsis thaliana GN=KCS19 PE=2 SV=1 Back     alignment and function description
>sp|Q9XF43|KCS6_ARATH 3-ketoacyl-CoA synthase 6 OS=Arabidopsis thaliana GN=CUT1 PE=1 SV=1 Back     alignment and function description
>sp|O65677|KCS2_ARATH Probable 3-ketoacyl-CoA synthase 2 OS=Arabidopsis thaliana GN=KCS2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query465
159895657466 3-ketoacyl-CoA synthase 3 [Gossypium hir 0.952 0.950 0.769 0.0
449460981461 PREDICTED: 3-ketoacyl-CoA synthase 12-li 0.987 0.995 0.732 0.0
449484930461 PREDICTED: LOW QUALITY PROTEIN: 3-ketoac 0.987 0.995 0.732 0.0
255587163475 acyltransferase, putative [Ricinus commu 0.987 0.966 0.737 0.0
224104497461 beta-ketoacyl-coa synthase family protei 0.978 0.986 0.741 0.0
159895661467 3-ketoacyl-CoA synthase 6 [Gossypium hir 0.967 0.963 0.732 0.0
359478655556 PREDICTED: 3-ketoacyl-CoA synthase 12, p 0.978 0.818 0.731 0.0
147780470467 hypothetical protein VITISV_002308 [Viti 0.961 0.957 0.735 0.0
15226916476 3-ketoacyl-CoA synthase 12 [Arabidopsis 0.961 0.939 0.729 0.0
21536949476 putative fatty acid elongase [Arabidopsi 0.961 0.939 0.732 0.0
>gi|159895657|gb|ABX10439.1| 3-ketoacyl-CoA synthase 3 [Gossypium hirsutum] Back     alignment and taxonomy information
 Score =  741 bits (1914), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/451 (76%), Positives = 403/451 (89%), Gaps = 8/451 (1%)

Query: 18  KIWKWVDEKRDKECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSS 77
           KIWKWV++KRD+ECYILDYQCYKP DDRMV T+F+G+VIKR KNLGLNEYKFLLKAIVSS
Sbjct: 18  KIWKWVNDKRDQECYILDYQCYKPADDRMVGTEFSGEVIKRNKNLGLNEYKFLLKAIVSS 77

Query: 78  GIGEQTYSPRIMFAGREDNPTLQDGIDEMEEFFEDSIAKILDRSGISPKEIDILVVNISM 137
           GIGEQTY+PRIMF+GRE+ PTL DGI EMEEFF+DSI K+L R+G+SP EID+LVVN+SM
Sbjct: 78  GIGEQTYAPRIMFSGREETPTLADGILEMEEFFQDSIGKLLSRAGVSPHEIDLLVVNVSM 137

Query: 138 IAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSES 197
           I   P LSSRIIN YKMR+DIK FNLTGMGCSASLIS+DIVR+VFK+YKN  A++VTSES
Sbjct: 138 ITAPPCLSSRIINHYKMRQDIKCFNLTGMGCSASLISLDIVRNVFKSYKNKYALLVTSES 197

Query: 198 LSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRTHHGARDDSYGC 257
           LSPNWY+GNDRSMILANCLFRSGG  ILL+N +SL+  A+FKLKCLVRTHHGARD+SY C
Sbjct: 198 LSPNWYAGNDRSMILANCLFRSGGCAILLTNNKSLKHRAMFKLKCLVRTHHGARDESYNC 257

Query: 258 CVQTEDEQGRPGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNN- 316
           C+Q EDE G+ GF+LGKNLPKAATR+FVDNLRVI+P ILP+ EL+R+ +V+ V+K + + 
Sbjct: 258 CIQREDEIGKVGFYLGKNLPKAATRSFVDNLRVITPKILPVTELVRFMVVSLVKKWNRHG 317

Query: 317 -----TPKGEKKAGVNFRTGVDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGN 371
                T +G  KAGVNF++GVDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGN
Sbjct: 318 STKGTTTQGPIKAGVNFKSGVDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGN 377

Query: 372 TSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVWEVVRDLDGNVGNVWKDIID 431
           TSA+SLWYVLAYMEAKKRLKKGD+VLMISFGAGFKCNSC+WE+VRDL+   GNVWKD I 
Sbjct: 378 TSASSLWYVLAYMEAKKRLKKGDKVLMISFGAGFKCNSCLWEIVRDLED--GNVWKDEIQ 435

Query: 432 SYPPQSLANPYLEKYGWIQNEDISTFKVPEN 462
           +YPP++L NPY+EKYGWI++ED STFK+PE+
Sbjct: 436 NYPPKTLVNPYMEKYGWIKDEDPSTFKIPED 466

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|449460981|ref|XP_004148222.1| PREDICTED: 3-ketoacyl-CoA synthase 12-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449484930|ref|XP_004157020.1| PREDICTED: LOW QUALITY PROTEIN: 3-ketoacyl-CoA synthase 12-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|255587163|ref|XP_002534162.1| acyltransferase, putative [Ricinus communis] gi|223525766|gb|EEF28222.1| acyltransferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224104497|ref|XP_002313455.1| beta-ketoacyl-coa synthase family protein [Populus trichocarpa] gi|222849863|gb|EEE87410.1| beta-ketoacyl-coa synthase family protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|159895661|gb|ABX10441.1| 3-ketoacyl-CoA synthase 6 [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|359478655|ref|XP_002284511.2| PREDICTED: 3-ketoacyl-CoA synthase 12, partial [Vitis vinifera] Back     alignment and taxonomy information
>gi|147780470|emb|CAN62551.1| hypothetical protein VITISV_002308 [Vitis vinifera] Back     alignment and taxonomy information
>gi|15226916|ref|NP_180431.1| 3-ketoacyl-CoA synthase 12 [Arabidopsis thaliana] gi|75206074|sp|Q9SIB2.1|KCS12_ARATH RecName: Full=3-ketoacyl-CoA synthase 12; Short=KCS-12; AltName: Full=Very long-chain fatty acid condensing enzyme 12; Short=VLCFA condensing enzyme 12; Flags: Precursor gi|4580394|gb|AAD24372.1| putative fatty acid elongase [Arabidopsis thaliana] gi|15810263|gb|AAL07019.1| putative fatty acid elongase [Arabidopsis thaliana] gi|20259583|gb|AAM14134.1| putative fatty acid elongase [Arabidopsis thaliana] gi|330253058|gb|AEC08152.1| 3-ketoacyl-CoA synthase 12 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|21536949|gb|AAM61290.1| putative fatty acid elongase [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query465
TAIR|locus:2065499476 KCS12 "3-ketoacyl-CoA synthase 0.963 0.941 0.730 7.9e-188
TAIR|locus:2026600478 KCS3 "3-ketoacyl-CoA synthase 0.965 0.939 0.712 1.6e-180
TAIR|locus:2184387464 KCS19 "3-ketoacyl-CoA synthase 0.944 0.946 0.534 1.3e-132
TAIR|locus:2200955528 KCS1 "3-ketoacyl-CoA synthase 0.866 0.763 0.425 2.8e-89
TAIR|locus:2170837529 KCS20 "3-ketoacyl-CoA synthase 0.868 0.763 0.427 8.6e-88
TAIR|locus:2031260492 KCS5 "3-ketoacyl-CoA synthase 0.864 0.817 0.431 3.7e-87
TAIR|locus:2062775466 KCS13 "3-ketoacyl-CoA synthase 0.866 0.864 0.422 6e-87
TAIR|locus:2042684512 KCS9 "3-ketoacyl-CoA synthase 0.868 0.789 0.401 6.9e-86
TAIR|locus:2201262497 KCS6 "3-ketoacyl-CoA synthase 0.860 0.804 0.422 2.4e-85
TAIR|locus:2139579487 KCS17 "3-ketoacyl-CoA synthase 0.868 0.829 0.413 8e-85
TAIR|locus:2065499 KCS12 "3-ketoacyl-CoA synthase 12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1821 (646.1 bits), Expect = 7.9e-188, P = 7.9e-188
 Identities = 336/460 (73%), Positives = 397/460 (86%)

Query:    17 FKIWKWVDEKRDKECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVS 76
             FKIWK +D K+DK+CYILDYQC+KPTDDRMVST F+G++I R +NLGL EYKFLLKAIVS
Sbjct:    17 FKIWKLIDSKQDKDCYILDYQCHKPTDDRMVSTQFSGEIIYRNQNLGLTEYKFLLKAIVS 76

Query:    77 SGIGEQTYSPRIMFAGREDNPTLQDGIDEMEEFFEDSIAKILDRSGISPKEIDILVVNIS 136
             SGIGEQTY+PR++F GRE+ P+LQDGI EMEEF+ DSI K+L+R+ ISPK+IDILVVN+S
Sbjct:    77 SGIGEQTYAPRLVFEGREERPSLQDGISEMEEFYVDSIGKLLERNQISPKDIDILVVNVS 136

Query:   137 MIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSE 196
             M++  PSL+SRIIN YKMR D+KVFNLTGMGCSASLISVDIV+++FK+Y N  A+V TSE
Sbjct:   137 MLSSTPSLASRIINHYKMRDDVKVFNLTGMGCSASLISVDIVKNIFKSYANKLALVATSE 196

Query:   197 SLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRTHHGARDDSYG 256
             SLSPNWYSGN+RSMILANCLFRSGG  ILL+NKRSL + A+FKLKC+VRTHHGAR++SY 
Sbjct:   197 SLSPNWYSGNNRSMILANCLFRSGGCAILLTNKRSLRKKAMFKLKCMVRTHHGAREESYN 256

Query:   257 CCVQTEDEQGRPGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFVRKM--- 313
             CC+Q EDEQGR GF+LGKNLPKAATRAFV+NL+VI+P ILP+ EL+R+ L   ++K+   
Sbjct:   257 CCIQAEDEQGRVGFYLGKNLPKAATRAFVENLKVITPKILPVTELIRFMLKLLIKKIKIR 316

Query:   314 ------SNNTPKGEK-KAGVNFRTGVDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMTL 366
                   S N P G   KAG+NF+TG++HFCIHTGGKAVIDGIG SLDL EYD+EPARMTL
Sbjct:   317 QNPSKGSTNLPPGTPLKAGINFKTGIEHFCIHTGGKAVIDGIGHSLDLNEYDIEPARMTL 376

Query:   367 HRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVWEVVRDLDG--NVGN 424
             HRFGNTSA+SLWYVLAYMEAKKRLK+GDRV MISFGAGFKCNSCVWEVVRDL G  + GN
Sbjct:   377 HRFGNTSASSLWYVLAYMEAKKRLKRGDRVFMISFGAGFKCNSCVWEVVRDLTGGESKGN 436

Query:   425 VWKDIIDSYPPQSLANPYLEKYGWIQNEDISTFKVPENYL 464
             VW   ID YPP+S+ NPYLEK+GWIQ+ED  TFKVP+ ++
Sbjct:   437 VWNHCIDDYPPKSILNPYLEKFGWIQDEDPDTFKVPDAFM 476
GO:0003824 "catalytic activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0006633 "fatty acid biosynthetic process" evidence=IEA
GO:0008152 "metabolic process" evidence=IEA
GO:0008610 "lipid biosynthetic process" evidence=IEA
GO:0016020 "membrane" evidence=IEA
GO:0016746 "transferase activity, transferring acyl groups" evidence=ISS
GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA
GO:0005783 "endoplasmic reticulum" evidence=IDA
TAIR|locus:2026600 KCS3 "3-ketoacyl-CoA synthase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2184387 KCS19 "3-ketoacyl-CoA synthase 19" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200955 KCS1 "3-ketoacyl-CoA synthase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2170837 KCS20 "3-ketoacyl-CoA synthase 20" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031260 KCS5 "3-ketoacyl-CoA synthase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2062775 KCS13 "3-ketoacyl-CoA synthase 13" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042684 KCS9 "3-ketoacyl-CoA synthase 9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2201262 KCS6 "3-ketoacyl-CoA synthase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139579 KCS17 "3-ketoacyl-CoA synthase 17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9SIB2KCS12_ARATH2, ., 3, ., 1, ., -0.72980.96120.9390yesno
Q9LQP8KCS3_ARATH2, ., 3, ., 1, ., -0.70750.96980.9435nono

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.3.10.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pm.C_LG_IX000632
hypothetical protein (461 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query465
pfam08392290 pfam08392, FAE1_CUT1_RppA, FAE1/Type III polyketid 1e-146
PLN02854521 PLN02854, PLN02854, 3-ketoacyl-CoA synthase 1e-124
PLN02932478 PLN02932, PLN02932, 3-ketoacyl-CoA synthase 1e-118
PLN02192511 PLN02192, PLN02192, 3-ketoacyl-CoA synthase 1e-117
PLN00415466 PLN00415, PLN00415, 3-ketoacyl-CoA synthase 1e-116
PLN02377502 PLN02377, PLN02377, 3-ketoacyl-CoA synthase 1e-116
cd00831361 cd00831, CHS_like, Chalcone and stilbene synthases 1e-115
COG3424356 COG3424, BcsA, Predicted naringenin-chalcone synth 3e-23
cd00830320 cd00830, KAS_III, Ketoacyl-acyl carrier protein sy 2e-21
COG0332323 COG0332, FabH, 3-oxoacyl-[acyl-carrier-protein] 8e-21
pfam0854190 pfam08541, ACP_syn_III_C, 3-Oxoacyl-[acyl-carrier- 6e-15
TIGR00747318 TIGR00747, fabH, 3-oxoacyl-(acyl-carrier-protein) 2e-14
cd00827324 cd00827, init_cond_enzymes, "initiating" condensin 2e-14
PRK09352319 PRK09352, PRK09352, 3-oxoacyl-(acyl carrier protei 4e-14
PRK05963326 PRK05963, PRK05963, 3-oxoacyl-(acyl carrier protei 1e-08
PRK12879325 PRK12879, PRK12879, 3-oxoacyl-(acyl carrier protei 2e-08
PLN03169391 PLN03169, PLN03169, chalcone synthase family prote 1e-06
PLN03172393 PLN03172, PLN03172, chalcone synthase family prote 2e-06
pfam02797151 pfam02797, Chal_sti_synt_C, Chalcone and stilbene 7e-06
PRK09258338 PRK09258, PRK09258, 3-oxoacyl-(acyl carrier protei 7e-05
PLN02326379 PLN02326, PLN02326, 3-oxoacyl-[acyl-carrier-protei 2e-04
PLN03171399 PLN03171, PLN03171, chalcone synthase-like protein 3e-04
PRK07515372 PRK07515, PRK07515, 3-oxoacyl-(acyl carrier protei 0.001
PLN03173391 PLN03173, PLN03173, chalcone synthase; Provisional 0.002
CHL00203326 CHL00203, fabH, 3-oxoacyl-acyl-carrier-protein syn 0.003
>gnl|CDD|116972 pfam08392, FAE1_CUT1_RppA, FAE1/Type III polyketide synthase-like protein Back     alignment and domain information 
 Score =  417 bits (1075), Expect = e-146
 Identities = 129/287 (44%), Positives = 184/287 (64%), Gaps = 2/287 (0%)

Query: 26  KRDKECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQTYS 85
           +R +  Y++DY CYKP DDR VST+   + I+R          F  K +  SG+GE+TY 
Sbjct: 4   RRPRPVYLVDYACYKPPDDRKVSTETFMEHIRRNGKFDEESLDFQRKILERSGLGEETYV 63

Query: 86  PRIMFAGREDNPTLQDGIDEMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLS 145
           PR +      NPT+ +  +E EE    ++ ++  ++G+ P++I ILVVN S+    PSLS
Sbjct: 64  PRSVLEIPP-NPTMAEAREEAEEVMFGAVDELFAKTGVRPRDIGILVVNCSLFNPTPSLS 122

Query: 146 SRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSG 205
           + I+NRYKMR DIK +NL+GMGCSA LIS+D+ + + + + N  A+VV++E+++PNWY+G
Sbjct: 123 AMIVNRYKMRGDIKSYNLSGMGCSAGLISIDLAKDLLQVHPNTYALVVSTENITPNWYAG 182

Query: 206 NDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRTHHGARDDSYGCCVQTEDEQ 265
           NDRSM+L NCLFR GGA ILLSNK +  R A ++L   VRTH GA D +Y C  Q EDE 
Sbjct: 183 NDRSMLLPNCLFRMGGAAILLSNKPADRRRAKYELVHTVRTHKGADDRAYRCVYQEEDED 242

Query: 266 GRPGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFVRK 312
           G+ G  L K+L   A  A   N+  + P++LP+ E LR+   T V +
Sbjct: 243 GKVGVSLSKDLMAVAGDALKTNITTLGPLVLPLSEQLRFF-ATLVAR 288

The members of this family are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region featured in this family contains the active site residues, as well as motifs involved in substrate binding. Length = 290
>gnl|CDD|215459 PLN02854, PLN02854, 3-ketoacyl-CoA synthase Back     alignment and domain information
>gnl|CDD|178520 PLN02932, PLN02932, 3-ketoacyl-CoA synthase Back     alignment and domain information
>gnl|CDD|215123 PLN02192, PLN02192, 3-ketoacyl-CoA synthase Back     alignment and domain information
>gnl|CDD|177808 PLN00415, PLN00415, 3-ketoacyl-CoA synthase Back     alignment and domain information
>gnl|CDD|166018 PLN02377, PLN02377, 3-ketoacyl-CoA synthase Back     alignment and domain information
>gnl|CDD|238427 cd00831, CHS_like, Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs Back     alignment and domain information
>gnl|CDD|225958 COG3424, BcsA, Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|238426 cd00830, KAS_III, Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems Back     alignment and domain information
>gnl|CDD|223409 COG0332, FabH, 3-oxoacyl-[acyl-carrier-protein] Back     alignment and domain information
>gnl|CDD|117118 pfam08541, ACP_syn_III_C, 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Back     alignment and domain information
>gnl|CDD|233113 TIGR00747, fabH, 3-oxoacyl-(acyl-carrier-protein) synthase III Back     alignment and domain information
>gnl|CDD|238423 cd00827, init_cond_enzymes, "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes Back     alignment and domain information
>gnl|CDD|236475 PRK09352, PRK09352, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>gnl|CDD|180328 PRK05963, PRK05963, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>gnl|CDD|237245 PRK12879, PRK12879, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>gnl|CDD|215612 PLN03169, PLN03169, chalcone synthase family protein; Provisional Back     alignment and domain information
>gnl|CDD|178716 PLN03172, PLN03172, chalcone synthase family protein; Provisional Back     alignment and domain information
>gnl|CDD|111670 pfam02797, Chal_sti_synt_C, Chalcone and stilbene synthases, C-terminal domain Back     alignment and domain information
>gnl|CDD|181732 PRK09258, PRK09258, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>gnl|CDD|215185 PLN02326, PLN02326, 3-oxoacyl-[acyl-carrier-protein] synthase III Back     alignment and domain information
>gnl|CDD|178715 PLN03171, PLN03171, chalcone synthase-like protein; Provisional Back     alignment and domain information
>gnl|CDD|236037 PRK07515, PRK07515, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>gnl|CDD|178717 PLN03173, PLN03173, chalcone synthase; Provisional Back     alignment and domain information
>gnl|CDD|164577 CHL00203, fabH, 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 465
PLN02854521 3-ketoacyl-CoA synthase 100.0
PLN02192511 3-ketoacyl-CoA synthase 100.0
PLN02932478 3-ketoacyl-CoA synthase 100.0
PLN02377502 3-ketoacyl-CoA synthase 100.0
PLN00415466 3-ketoacyl-CoA synthase 100.0
PF08392290 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- 100.0
COG0332323 FabH 3-oxoacyl-[acyl-carrier-protein] 100.0
PLN03172393 chalcone synthase family protein; Provisional 100.0
cd00831361 CHS_like Chalcone and stilbene synthases; plant-sp 100.0
PLN03173391 chalcone synthase; Provisional 100.0
PLN03168389 chalcone synthase; Provisional 100.0
PLN03169391 chalcone synthase family protein; Provisional 100.0
PLN03170401 chalcone synthase; Provisional 100.0
PLN03171399 chalcone synthase-like protein; Provisional 100.0
COG3424356 BcsA Predicted naringenin-chalcone synthase [Secon 100.0
PRK12880353 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PRK05963326 3-oxoacyl-(acyl carrier protein) synthase II; Revi 100.0
PLN02326379 3-oxoacyl-[acyl-carrier-protein] synthase III 100.0
CHL00203326 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr 100.0
PRK12879325 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PRK07204329 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PRK09258338 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PRK06840339 hypothetical protein; Validated 100.0
TIGR00747318 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III 100.0
cd00830320 KAS_III Ketoacyl-acyl carrier protein synthase III 100.0
PRK09352319 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PRK06816378 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PRK04262347 hypothetical protein; Provisional 100.0
PRK07515372 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
TIGR00748345 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase 100.0
cd00827324 init_cond_enzymes "initiating" condensing enzymes 100.0
TIGR01835379 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt 100.0
PLN02577459 hydroxymethylglutaryl-CoA synthase 100.0
COG3425377 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi 100.0
TIGR01833454 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth 99.98
PF00195226 Chal_sti_synt_N: Chalcone and stilbene synthases, 99.98
cd00327254 cond_enzymes Condensing enzymes; Family of enzymes 99.95
cd00825332 decarbox_cond_enzymes decarboxylating condensing e 99.93
PF02797151 Chal_sti_synt_C: Chalcone and stilbene synthases, 99.84
PF0854190 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC 99.83
KOG1393462 consensus Hydroxymethylglutaryl-CoA synthase [Lipi 99.78
PF01154174 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s 99.75
TIGR02845327 spore_V_AD stage V sporulation protein AD. Bacillu 99.73
PRK06147348 3-oxoacyl-(acyl carrier protein) synthase; Validat 99.73
PRK08304337 stage V sporulation protein AD; Validated 99.59
cd00834406 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) 99.57
cd00751386 thiolase Thiolase are ubiquitous enzymes that cata 99.53
PRK09051394 beta-ketothiolase; Provisional 99.47
PRK05656393 acetyl-CoA acetyltransferase; Provisional 99.47
smart00825424 PKS_KS Beta-ketoacyl synthase. The structure of be 99.47
TIGR01930386 AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi 99.46
PRK09052399 acetyl-CoA acetyltransferase; Provisional 99.44
PRK06064389 acetyl-CoA acetyltransferase; Provisional 99.42
PRK06025417 acetyl-CoA acetyltransferase; Provisional 99.4
PRK07108392 acetyl-CoA acetyltransferase; Provisional 99.4
cd00828407 elong_cond_enzymes "elongating" condensing enzymes 99.4
PRK08313386 acetyl-CoA acetyltransferase; Provisional 99.4
cd00829375 SCP-x_thiolase Thiolase domain associated with ste 99.39
PRK08242402 acetyl-CoA acetyltransferase; Validated 99.38
PF0854580 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP) 99.37
PRK12404334 stage V sporulation protein AD; Provisional 99.36
PRK05790393 putative acyltransferase; Provisional 99.34
TIGR03150407 fabF beta-ketoacyl-acyl-carrier-protein synthase I 99.34
cd00833421 PKS polyketide synthases (PKSs) polymerize simple 99.34
PRK06954397 acetyl-CoA acetyltransferase; Provisional 99.34
PRK06501425 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.34
PRK07661391 acetyl-CoA acetyltransferase; Provisional 99.31
PRK07314411 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.3
PRK06445394 acetyl-CoA acetyltransferase; Provisional 99.29
PRK06690361 acetyl-CoA acetyltransferase; Provisional 99.27
PLN02287452 3-ketoacyl-CoA thiolase 99.24
PRK06333424 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.23
PLN02644394 acetyl-CoA C-acetyltransferase 99.21
PRK06158384 thiolase; Provisional 99.21
PRK07103410 polyketide beta-ketoacyl:acyl carrier protein synt 99.18
PRK08256391 lipid-transfer protein; Provisional 99.18
PRK07850387 acetyl-CoA acetyltransferase; Provisional 99.18
PRK06633392 acetyl-CoA acetyltransferase; Provisional 99.17
PRK06504390 acetyl-CoA acetyltransferase; Provisional 99.16
PRK08722414 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.15
PRK09116405 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.13
PRK08439406 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.12
PRK05952381 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.11
PRK06205404 acetyl-CoA acetyltransferase; Provisional 99.09
PRK08235393 acetyl-CoA acetyltransferase; Provisional 99.08
PRK07801382 acetyl-CoA acetyltransferase; Provisional 99.06
PTZ00050421 3-oxoacyl-acyl carrier protein synthase; Provision 99.03
cd00832399 CLF Chain-length factor (CLF) is a factor required 99.02
PRK12578385 acetyl-CoA acetyltransferase; Provisional 99.01
PLN02787540 3-oxoacyl-[acyl-carrier-protein] synthase II 99.01
PRK06059399 lipid-transfer protein; Provisional 99.0
PRK08170426 acetyl-CoA acetyltransferase; Provisional 98.99
PLN02836437 3-oxoacyl-[acyl-carrier-protein] synthase 98.98
PF00108264 Thiolase_N: Thiolase, N-terminal domain; InterPro: 98.98
PRK09185392 3-oxoacyl-(acyl carrier protein) synthase I; Revie 98.97
PRK06519398 3-oxoacyl-(acyl carrier protein) synthase II; Revi 98.97
PRK06065392 acetyl-CoA acetyltransferase; Provisional 98.93
PRK07910418 3-oxoacyl-(acyl carrier protein) synthase II; Revi 98.93
cd00826393 nondecarbox_cond_enzymes nondecarboxylating conden 98.92
PRK08257 498 acetyl-CoA acetyltransferase; Validated 98.9
PRK07967406 3-oxoacyl-(acyl carrier protein) synthase I; Revie 98.89
PRK08963428 fadI 3-ketoacyl-CoA thiolase; Reviewed 98.84
PRK13359400 beta-ketoadipyl CoA thiolase; Provisional 98.83
PRK14691342 3-oxoacyl-(acyl carrier protein) synthase II; Prov 98.82
PRK07851406 acetyl-CoA acetyltransferase; Provisional 98.79
PRK08131401 acetyl-CoA acetyltransferase; Provisional 98.78
PRK09050401 beta-ketoadipyl CoA thiolase; Validated 98.78
PRK07516389 acetyl-CoA acetyltransferase; Provisional 98.77
TIGR02446430 FadI fatty oxidation complex, beta subunit FadI. T 98.75
TIGR02430400 pcaF beta-ketoadipyl CoA thiolase. Members of this 98.74
PRK06366388 acetyl-CoA acetyltransferase; Provisional 98.74
PRK06289403 acetyl-CoA acetyltransferase; Provisional 98.73
PF00109254 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal 98.7
PTZ00455438 3-ketoacyl-CoA thiolase; Provisional 98.66
PRK06157398 acetyl-CoA acetyltransferase; Validated 98.65
PRK08947387 fadA 3-ketoacyl-CoA thiolase; Reviewed 98.64
TIGR02813 2582 omega_3_PfaA polyketide-type polyunsaturated fatty 98.6
TIGR02445385 fadA fatty oxidation complex, beta subunit FadA. T 98.59
PRK06365430 acetyl-CoA acetyltransferase; Provisional 98.58
PRK09268427 acetyl-CoA acetyltransferase; Provisional 98.56
PF07451329 SpoVAD: Stage V sporulation protein AD (SpoVAD); I 98.44
KOG1389435 consensus 3-oxoacyl CoA thiolase [Lipid transport 98.4
PRK07937352 lipid-transfer protein; Provisional 98.38
COG0304412 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li 98.3
PRK08142388 acetyl-CoA acetyltransferase; Provisional 98.29
PRK07855386 lipid-transfer protein; Provisional 98.14
COG3321 1061 Polyketide synthase modules and related proteins [ 98.07
PRK06066385 acetyl-CoA acetyltransferase; Provisional 97.99
KOG1390396 consensus Acetyl-CoA acetyltransferase [Lipid tran 97.87
COG0183392 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis 97.86
PF08540282 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A s 97.57
KOG1394440 consensus 3-oxoacyl-(acyl-carrier-protein) synthas 97.54
KOG1406408 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44 97.51
KOG1391396 consensus Acetyl-CoA acetyltransferase [Lipid tran 96.64
KOG1392465 consensus Acetyl-CoA acetyltransferase [Lipid tran 96.13
PF0854190 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC 95.29
TIGR00748345 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase 94.3
PRK06816378 3-oxoacyl-(acyl carrier protein) synthase III; Rev 93.78
PRK06025417 acetyl-CoA acetyltransferase; Provisional 93.54
PRK09258338 3-oxoacyl-(acyl carrier protein) synthase III; Rev 93.44
PF13723218 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-termina 93.34
PRK05963326 3-oxoacyl-(acyl carrier protein) synthase II; Revi 93.16
PRK07204329 3-oxoacyl-(acyl carrier protein) synthase III; Rev 92.44
PRK12879325 3-oxoacyl-(acyl carrier protein) synthase III; Rev 91.9
TIGR00747318 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III 91.81
PRK08235393 acetyl-CoA acetyltransferase; Provisional 91.62
cd00825332 decarbox_cond_enzymes decarboxylating condensing e 91.45
PRK04262347 hypothetical protein; Provisional 91.32
PRK07851406 acetyl-CoA acetyltransferase; Provisional 91.27
CHL00203326 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr 91.24
PRK06840339 hypothetical protein; Validated 90.96
TIGR02430400 pcaF beta-ketoadipyl CoA thiolase. Members of this 90.74
PLN02326379 3-oxoacyl-[acyl-carrier-protein] synthase III 90.69
cd00830320 KAS_III Ketoacyl-acyl carrier protein synthase III 90.47
PRK09050401 beta-ketoadipyl CoA thiolase; Validated 90.42
PRK13359400 beta-ketoadipyl CoA thiolase; Provisional 90.05
PRK06205404 acetyl-CoA acetyltransferase; Provisional 89.96
PRK09352319 3-oxoacyl-(acyl carrier protein) synthase III; Rev 89.75
PRK07515372 3-oxoacyl-(acyl carrier protein) synthase III; Rev 89.65
PRK08963428 fadI 3-ketoacyl-CoA thiolase; Reviewed 89.24
cd00327254 cond_enzymes Condensing enzymes; Family of enzymes 89.23
PRK08242402 acetyl-CoA acetyltransferase; Validated 88.17
TIGR02445385 fadA fatty oxidation complex, beta subunit FadA. T 87.7
PRK08947387 fadA 3-ketoacyl-CoA thiolase; Reviewed 87.39
PRK06147348 3-oxoacyl-(acyl carrier protein) synthase; Validat 87.35
KOG1202 2376 consensus Animal-type fatty acid synthase and rela 87.34
PRK07850387 acetyl-CoA acetyltransferase; Provisional 86.87
PRK06366388 acetyl-CoA acetyltransferase; Provisional 86.54
COG0332323 FabH 3-oxoacyl-[acyl-carrier-protein] 86.36
PRK09052399 acetyl-CoA acetyltransferase; Provisional 85.47
PF02803123 Thiolase_C: Thiolase, C-terminal domain; InterPro: 85.45
COG3425377 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi 85.44
cd00831361 CHS_like Chalcone and stilbene synthases; plant-sp 84.94
PRK07516389 acetyl-CoA acetyltransferase; Provisional 84.85
PRK08131401 acetyl-CoA acetyltransferase; Provisional 83.56
PRK06954397 acetyl-CoA acetyltransferase; Provisional 83.35
PF02803123 Thiolase_C: Thiolase, C-terminal domain; InterPro: 83.3
PRK05656393 acetyl-CoA acetyltransferase; Provisional 83.18
PRK08257498 acetyl-CoA acetyltransferase; Validated 82.44
PRK07661391 acetyl-CoA acetyltransferase; Provisional 82.38
PRK09051394 beta-ketothiolase; Provisional 81.96
PLN02287452 3-ketoacyl-CoA thiolase 81.76
>PLN02854 3-ketoacyl-CoA synthase Back     alignment and domain information 
Probab=100.00  E-value=9.5e-96  Score=765.11  Aligned_cols=427  Identities=41%  Similarity=0.744  Sum_probs=396.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcccCCCceEEEeeeeecCCCCCccCHHHHHHHHHhhccCCcchHHHHHHHHHHcCccceE
Q 039047            4 LFYLYLLPSLYLMFKIWKWVDEKRDKECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQT   83 (465)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~r~~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~~r~   83 (465)
                      ++++.+++++++...+|++   +||++||++||+||+|+++++++.+.++++..+.+.+++++++|++|++++||||++|
T Consensus        90 ~~~~~~~~~~~~~~~~~~~---~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sg~g~~t  166 (521)
T PLN02854         90 ATRLTGSAFLLFLLGLYWA---KRSKPVYLVDFACYKPEDERKISVDSFLTMTEENGSFEDETVQFQRRISTRSGLGDET  166 (521)
T ss_pred             HHHHHHHHHHHHHHHHHHH---cCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCcc
Confidence            4555555667777888888   9999999999999999999999999999999999999999999999999999999999


Q ss_pred             eecCccccCCCCCCChhhhhhhHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeee
Q 039047           84 YSPRIMFAGREDNPTLQDGIDEMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNL  163 (465)
Q Consensus        84 ~~~~~~~~~~~~~~t~~~~~~e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l  163 (465)
                      |+|++.++.+++ ++|+++++|++.+++.|+++||+++|++|+|||+||++||++++.|+++++|+++||+++++.+||+
T Consensus       167 y~P~~~~~~~~~-~~~~~~r~ea~~v~~~~~~~lL~kaGi~p~dID~LIv~cS~~~p~PSlAa~I~n~LGlr~~i~afdL  245 (521)
T PLN02854        167 YLPRGITSRPPN-LCMEEARAEAEAVMFGALDSLFSKTGVKPRDIGILIVNCSLFNPTPSLSAMIVNHYKLRTDIKSYNL  245 (521)
T ss_pred             ccCccccCCCCc-chHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCCCceEEec
Confidence            999999988776 4999999999999999999999999999999999999999999999999999999999989999999


Q ss_pred             cCCcchHHHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCCCCCccchhhhhhccccceEEEEecCCccccccceeeece
Q 039047          164 TGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCL  243 (465)
Q Consensus       164 ~~~gCs~~~~al~~A~~ll~~g~~~~aLVV~~E~~s~~~~~~~dr~~~~~~~lfgDGaaA~lLs~~~~~~~~~~~~L~~~  243 (465)
                      +||||+||+.||++|+++++++++++||||++|.+|.+||.++||++++++++|||||+|+||++++.++++++|+|.++
T Consensus       246 sgmGCSggl~aL~lA~~lL~~~~~~~aLVVstE~~S~~~y~g~Drs~lv~~~LFgDGAAAvlLs~~~~~~~~~k~~L~~~  325 (521)
T PLN02854        246 GGMGCSAGLISIDLANDLLKANPNSYAVVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAVLLSNKARDRKRSKYQLVHT  325 (521)
T ss_pred             ccchhhhHHHHHHHHHHHHHhCCCCeEEEEEEeeeecCCCCCCchhhhcceeeeccceeEEEEecccccccccchheeeE
Confidence            99999999999999999999999999999999999999999999999999999999999999998764444578999999


Q ss_pred             EEeeeCCCCCCCccceeccCCCCCCceecCCChhHHHHHHHhhhhhhcCCCcchHHHHHHHHHHHHHHHHhccCCcCCcC
Q 039047          244 VRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKK  323 (465)
Q Consensus       244 ~~t~~~sd~~~~~~~~~~~d~~G~~g~~l~~d~p~~~~~~~~~~i~~~~p~~l~~~e~~~~a~~~v~~~~l~~~~l~~~g  323 (465)
                      ++++.++|++.|+|+++++|+.|..|+++++++|.+++++++.|++++||.++|..++++|+...+.+.+.+.   +...
T Consensus       326 v~t~~~ad~~~~~~i~~~~d~~G~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~~se~~~f~~~~i~~~L~~~---gl~~  402 (521)
T PLN02854        326 VRTHKGADDKNYNCVYQREDDKGTIGVSLARELMAVAGDALKTNITTLGPLVLPLSEQFMFFVTLVRRKLLKA---KVKP  402 (521)
T ss_pred             EEEEEeeCCCccCeEEeccCCCCcccccccccccchhhhhhhhhhhhccccccchHHHHHHHHHHHHHHHHHc---CCCc
Confidence            9999999999999999999888877889999999888899999999999999999999999888666554432   2333


Q ss_pred             CCCCccCCccEEEecCCCHHHHHHHHhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHHHcCCCCCCCEEEEEeeCc
Q 039047          324 AGVNFRTGVDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGA  403 (465)
Q Consensus       324 ~~~~~~~did~~~~H~~~~~ii~~i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~~~g~l~~Gd~vl~~sfGa  403 (465)
                      +.|||++||||||+||+|++|++.++++||++++++++|+++++|||||||||+||+|++++++|++++||+|||+|||+
T Consensus       403 ~~pd~~~didhf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSASI~~~L~~~~~kGrik~GD~Vl~iaFGs  482 (521)
T PLN02854        403 YIPDFKLAFEHFCIHAGGRAVLDELQKNLQLSDWHMEPSRMTLHRFGNTSSSSLWYELAYTEAKGRVSAGDRVWQIAFGS  482 (521)
T ss_pred             cCCcccccCcEEEECCCCHHHHHHHHHHcCCCcccccchHHHhhhcCChHhhHHHHHHHHHHHcCCCCCCCEEEEEEEch
Confidence            45789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhheeeeEEEecCCCC--CCCCcccccccCCCCCC
Q 039047          404 GFKCNSCVWEVVRDLDGN--VGNVWKDIIDSYPPQSL  438 (465)
Q Consensus       404 G~~~~~~v~~~~~~~~~~--~~~~w~~~i~~~p~~~~  438 (465)
                      ||+|++++||++++++++  ++|||+||||+||| ++
T Consensus       483 Gft~~sav~~~~~~~~~~~~~~~~w~~~i~~yp~-~~  518 (521)
T PLN02854        483 GFKCNSAVWKALREIPTGESTGNPWADSIDRYPV-KV  518 (521)
T ss_pred             hhhhhheeeEEeccCCccccCCCCchhhHhhCCC-CC
Confidence            999999999999998864  57999999999999 65

>PLN02192 3-ketoacyl-CoA synthase Back     alignment and domain information
>PLN02932 3-ketoacyl-CoA synthase Back     alignment and domain information
>PLN02377 3-ketoacyl-CoA synthase Back     alignment and domain information
>PLN00415 3-ketoacyl-CoA synthase Back     alignment and domain information
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species Back     alignment and domain information
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] Back     alignment and domain information
>PLN03172 chalcone synthase family protein; Provisional Back     alignment and domain information
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs Back     alignment and domain information
>PLN03173 chalcone synthase; Provisional Back     alignment and domain information
>PLN03168 chalcone synthase; Provisional Back     alignment and domain information
>PLN03169 chalcone synthase family protein; Provisional Back     alignment and domain information
>PLN03170 chalcone synthase; Provisional Back     alignment and domain information
>PLN03171 chalcone synthase-like protein; Provisional Back     alignment and domain information
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III Back     alignment and domain information
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional Back     alignment and domain information
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK06840 hypothetical protein; Validated Back     alignment and domain information
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III Back     alignment and domain information
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems Back     alignment and domain information
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK04262 hypothetical protein; Provisional Back     alignment and domain information
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative Back     alignment and domain information
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes Back     alignment and domain information
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade Back     alignment and domain information
>PLN02577 hydroxymethylglutaryl-CoA synthase Back     alignment and domain information
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] Back     alignment and domain information
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade Back     alignment and domain information
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 Back     alignment and domain information
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction Back     alignment and domain information
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction Back     alignment and domain information
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 Back     alignment and domain information
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 Back     alignment and domain information
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism] Back     alignment and domain information
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase Back     alignment and domain information
>TIGR02845 spore_V_AD stage V sporulation protein AD Back     alignment and domain information
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated Back     alignment and domain information
>PRK08304 stage V sporulation protein AD; Validated Back     alignment and domain information
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II Back     alignment and domain information
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine Back     alignment and domain information
>PRK09051 beta-ketothiolase; Provisional Back     alignment and domain information
>PRK05656 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>smart00825 PKS_KS Beta-ketoacyl synthase Back     alignment and domain information
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases Back     alignment and domain information
>PRK09052 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06064 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06025 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07108 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases Back     alignment and domain information
>PRK08313 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism Back     alignment and domain information
>PRK08242 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways Back     alignment and domain information
>PRK12404 stage V sporulation protein AD; Provisional Back     alignment and domain information
>PRK05790 putative acyltransferase; Provisional Back     alignment and domain information
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II Back     alignment and domain information
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations Back     alignment and domain information
>PRK06954 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK07661 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK06445 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06690 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PLN02287 3-ketoacyl-CoA thiolase Back     alignment and domain information
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PLN02644 acetyl-CoA C-acetyltransferase Back     alignment and domain information
>PRK06158 thiolase; Provisional Back     alignment and domain information
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated Back     alignment and domain information
>PRK08256 lipid-transfer protein; Provisional Back     alignment and domain information
>PRK07850 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06633 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06504 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK06205 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08235 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07801 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional Back     alignment and domain information
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria Back     alignment and domain information
>PRK12578 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II Back     alignment and domain information
>PRK06059 lipid-transfer protein; Provisional Back     alignment and domain information
>PRK08170 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase Back     alignment and domain information
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 Back     alignment and domain information
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed Back     alignment and domain information
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK06065 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine Back     alignment and domain information
>PRK08257 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed Back     alignment and domain information
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed Back     alignment and domain information
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional Back     alignment and domain information
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional Back     alignment and domain information
>PRK07851 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08131 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK09050 beta-ketoadipyl CoA thiolase; Validated Back     alignment and domain information
>PRK07516 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI Back     alignment and domain information
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase Back     alignment and domain information
>PRK06366 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06289 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2 Back     alignment and domain information
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional Back     alignment and domain information
>PRK06157 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed Back     alignment and domain information
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA Back     alignment and domain information
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA Back     alignment and domain information
>PRK06365 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK09268 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long Back     alignment and domain information
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism] Back     alignment and domain information
>PRK07937 lipid-transfer protein; Provisional Back     alignment and domain information
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK08142 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07855 lipid-transfer protein; Provisional Back     alignment and domain information
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK06066 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] Back     alignment and domain information
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] Back     alignment and domain information
>PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase Back     alignment and domain information
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism] Back     alignment and domain information
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] Back     alignment and domain information
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] Back     alignment and domain information
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 Back     alignment and domain information
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative Back     alignment and domain information
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK06025 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain Back     alignment and domain information
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III Back     alignment and domain information
>PRK08235 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction Back     alignment and domain information
>PRK04262 hypothetical protein; Provisional Back     alignment and domain information
>PRK07851 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional Back     alignment and domain information
>PRK06840 hypothetical protein; Validated Back     alignment and domain information
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase Back     alignment and domain information
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III Back     alignment and domain information
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems Back     alignment and domain information
>PRK09050 beta-ketoadipyl CoA thiolase; Validated Back     alignment and domain information
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional Back     alignment and domain information
>PRK06205 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed Back     alignment and domain information
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction Back     alignment and domain information
>PRK08242 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA Back     alignment and domain information
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed Back     alignment and domain information
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated Back     alignment and domain information
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] Back     alignment and domain information
>PRK07850 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06366 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] Back     alignment and domain information
>PRK09052 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 Back     alignment and domain information
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] Back     alignment and domain information
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs Back     alignment and domain information
>PRK07516 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08131 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06954 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 Back     alignment and domain information
>PRK05656 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08257 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>PRK07661 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK09051 beta-ketothiolase; Provisional Back     alignment and domain information
>PLN02287 3-ketoacyl-CoA thiolase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query465
2h84_A374 Crystal Structure Of The C-terminal Type Iii Polyke 4e-10
1u0m_A382 Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen 2e-08
1tee_A393 Crystal Structure Of C205f Mutant Of Pks18 From Myc 3e-08
1ted_A393 Crystal Structure Of A Type Iii Polyketide Synthase 4e-08
1z1e_A390 Crystal Structure Of Stilbene Synthase From Arachis 2e-06
2ebd_A309 Crystal Structure Of 3-oxoacyl-[acyl-carrier-protei 4e-06
1ub7_A322 The Crystal Analysis Of Beta-Keroacyl-[acyl Carrier 1e-05
1qlv_A402 Pyrone Synthase (Pys) From Gerbera Hybrida Length = 2e-05
3h76_A359 Crystal Structure Of Pqsd, A Key Enzyme In Pseudomo 2e-05
3tsy_A979 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Pr 3e-05
1cgz_A389 Chalcone Synthase From Alfalfa Complexed With Resve 4e-05
3awj_A402 Crystal Structure Of The Huperzia Serrata Polyketid 6e-05
3a5s_A387 Benzalacetone Synthase (I207lL208F) Length = 387 7e-05
3h78_A359 Crystal Structure Of Pseudomonas Aeruginosa Pqsd C1 3e-04
3a5q_A387 Benzalacetone Synthase From Rheum Palmatum Length = 3e-04
3gwa_A365 1.6 Angstrom Crystal Structure Of 3-Oxoacyl-(Acyl-C 3e-04
1cml_A389 Chalcone Synthase From Alfalfa Complexed With Malon 4e-04
3h77_A359 Crystal Structure Of Pseudomonas Aeruginosa Pqsd In 4e-04
1chw_A389 Chalcone Synthase From Alfalfa Complexed With Hexan 5e-04
1i86_A389 Chalcone Synthase, G256a Mutant Length = 389 5e-04
1bi5_A389 Chalcone Synthase From Alfalfa Length = 389 7e-04
1i89_A389 Chalcone Synthase (G256l) Length = 389 7e-04
1i88_A389 Chalcone Synthase (G256v) Length = 389 7e-04
1bq6_A388 Chalcone Synthase From Alfalfa With Coenzyme A Leng 7e-04
>pdb|2H84|A Chain A, Crystal Structure Of The C-terminal Type Iii Polyketide Synthase (pks Iii) Domain Of 'steely1' (a Type I/iii Pks Hybrid From Dictyostelium) Length = 374 Back     alignment and structure 
Iteration: 1

 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/276 (22%), Positives = 118/276 (42%), Gaps = 41/276 (14%)
Query: 140 IMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLS 199
           I+P ++ ++I+   + KD++  +L  MGC A L S+    S+ K       +VV +E  S
Sbjct: 129 IIPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVCTEVCS 188
Query: 200 PNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRTHHGARDDSYGCCV 259
            ++ + +    ++A+ +F  G A  ++     +E   L+++ C +       +++    +
Sbjct: 189 LHFSNTDGGDQMVASSIFADGSAAYIIGCNPRIEETPLYEVMCSINRSFPNTENAMVWDL 248
Query: 260 QTEDEQGRPGFHLG--KNLP---KAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMS 314
           + E      G++LG   ++P    +   AFVD              LL  A      K+ 
Sbjct: 249 EKE------GWNLGLDASIPIVIGSGIEAFVDT-------------LLDKA------KLQ 283
Query: 315 NNTPKGEKKAGVNFRTGVDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSA 374
            +T    K            F IHTGGK+++  I  SL +     +      H +GN S+
Sbjct: 284 TSTAISAKDC---------EFLIHTGGKSILMNIENSLGIDPKQTKNTWDVYHAYGNMSS 334
Query: 375 ASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSC 410
           AS+ +V+ +    K L      + ++FG G     C
Sbjct: 335 ASVIFVMDHARKSKSLPT--YSISLAFGPGLAFEGC 368
>pdb|1U0M|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Synthase (Thns) From Streptomyces Coelicolor A3(2): A Bacterial Type Iii Polyketide Synthase (Pks) Provides Insights Into Enzymatic Control Of Reactive Polyketide Intermediates Length = 382 Back     alignment and structure
>pdb|1TEE|A Chain A, Crystal Structure Of C205f Mutant Of Pks18 From Mycobacterium Tuberculosis Length = 393 Back     alignment and structure
>pdb|1TED|A Chain A, Crystal Structure Of A Type Iii Polyketide Synthase Pks18 From Mycobacterium Tuberculosis Length = 393 Back     alignment and structure
>pdb|1Z1E|A Chain A, Crystal Structure Of Stilbene Synthase From Arachis Hypogaea Length = 390 Back     alignment and structure
>pdb|2EBD|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl-carrier-protein] Synthase Iii From Aquifex Aeolicus Vf5 Length = 309 Back     alignment and structure
>pdb|1UB7|A Chain A, The Crystal Analysis Of Beta-Keroacyl-[acyl Carrier Protein] Synthase Iii (Fabh)from Thermus Thermophilus. Length = 322 Back     alignment and structure
>pdb|1QLV|A Chain A, Pyrone Synthase (Pys) From Gerbera Hybrida Length = 402 Back     alignment and structure
>pdb|3H76|A Chain A, Crystal Structure Of Pqsd, A Key Enzyme In Pseudomonas Aeruginosa Quinolone Signal Biosynthesis Pathway Length = 359 Back     alignment and structure
>pdb|3TSY|A Chain A, 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Protein Length = 979 Back     alignment and structure
>pdb|1CGZ|A Chain A, Chalcone Synthase From Alfalfa Complexed With Resveratrol Length = 389 Back     alignment and structure
>pdb|3AWJ|A Chain A, Crystal Structure Of The Huperzia Serrata Polyketide Synthase 1 Complexed With Coa-Sh Length = 402 Back     alignment and structure
>pdb|3A5S|A Chain A, Benzalacetone Synthase (I207lL208F) Length = 387 Back     alignment and structure
>pdb|3H78|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Pqsd C112a Mutant In Complex With Anthranilic Acid Length = 359 Back     alignment and structure
>pdb|3A5Q|A Chain A, Benzalacetone Synthase From Rheum Palmatum Length = 387 Back     alignment and structure
>pdb|3GWA|A Chain A, 1.6 Angstrom Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier-Protein) Synthase Iii Length = 365 Back     alignment and structure
>pdb|1CML|A Chain A, Chalcone Synthase From Alfalfa Complexed With Malonyl-Coa Length = 389 Back     alignment and structure
>pdb|3H77|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Pqsd In A Covalent Complex With Anthranilate Length = 359 Back     alignment and structure
>pdb|1CHW|A Chain A, Chalcone Synthase From Alfalfa Complexed With Hexanoyl-Coa Length = 389 Back     alignment and structure
>pdb|1I86|A Chain A, Chalcone Synthase, G256a Mutant Length = 389 Back     alignment and structure
>pdb|1BI5|A Chain A, Chalcone Synthase From Alfalfa Length = 389 Back     alignment and structure
>pdb|1I89|A Chain A, Chalcone Synthase (G256l) Length = 389 Back     alignment and structure
>pdb|1I88|A Chain A, Chalcone Synthase (G256v) Length = 389 Back     alignment and structure
>pdb|1BQ6|A Chain A, Chalcone Synthase From Alfalfa With Coenzyme A Length = 388 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query465
2h84_A374 Steely1; thiolase-fold, type III polyketide syntha 6e-91
3oit_A387 OS07G0271500 protein; type III polyketide synthase 2e-87
3awk_A402 Chalcone synthase-like polyketide synthase; type I 1e-64
3a5r_A387 Benzalacetone synthase; chalcone synthase, type II 5e-63
1i88_A389 CHS2, chalcone synthase 2; polyketide synthase, tr 1e-58
3v7i_A413 Putative polyketide synthase; type III polyketide 8e-56
2d3m_A406 Pentaketide chromone synthase; chalcone synthase, 6e-55
2p0u_A413 Stilbenecarboxylate synthase 2; polyketide synthas 2e-54
1xes_A413 Dihydropinosylvin synthase; native structure, tran 2e-53
3e1h_A465 PKSIIINC, putative uncharacterized protein; resorc 2e-51
3euo_A379 Type III pentaketide synthase; alpha helix, acyltr 2e-48
1ee0_A402 2-pyrone synthase; polyketide synthase, thiolase f 4e-45
1ted_A393 PKS18; thiolase fold, substrate binding tunnel, tr 2e-40
1u0m_A382 Putative polyketide synthase; type III polyketide 3e-37
3ov2_A393 Curcumin synthase; type III polyketide synthase, t 7e-35
3led_A392 3-oxoacyl-acyl carrier protein synthase III; struc 2e-17
3s21_A345 3-oxoacyl-[ACP] synthase III; non-decarboxylative 1e-16
4efi_A354 3-oxoacyl-(acyl-carrier protein) synthase; structu 2e-16
3gwa_A365 3-oxoacyl-(acyl-carrier-protein) synthase III; str 2e-16
1zow_A313 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB 7e-16
4dfe_A333 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci 1e-15
2ebd_A309 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 1e-15
3s3l_A357 CERJ; acyltransferase, FABH homologue, KS III homo 2e-15
3il3_A323 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 6e-15
1ub7_A322 3-oxoacyl-[acyl-carrier protein] synthase; fatty a 7e-15
1mzj_A339 Beta-ketoacylsynthase III; beta-ketosynthase, arom 8e-15
3h78_A359 PQS biosynthetic enzyme; PQSD, anthranilic acid, a 1e-14
1hnj_A317 Beta-ketoacyl-acyl carrier protein synthase III; F 2e-14
1u6e_A335 3-oxoacyl-[acyl-carrier-protein] synthase III; tra 8e-14
2x3e_A331 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, 8e-13
3il6_A321 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 3e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-09
1xpm_A396 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s 5e-09
3v4n_A388 HMG-COA synthase; hydroxymethylglutaryl-COA syntha 7e-09
3sqz_A425 Putative hydroxymethylglutaryl-COA synthase; thiol 3e-07
2p8u_A478 Hydroxymethylglutaryl-COA synthase, cytoplasmic; h 2e-05
2f82_A450 HMG-COA synthase; HMGS1, transferase; 2.10A {Brass 7e-05
3tsy_A979 Fusion protein 4-coumarate--COA ligase 1, resvera 9e-05
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} Length = 374 Back     alignment and structure
 Score =  280 bits (717), Expect = 6e-91
 Identities = 66/377 (17%), Positives = 132/377 (35%), Gaps = 39/377 (10%)

Query: 47  VSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGI-----GEQTYSPRIMFAGREDNPT--- 98
           +S       I    +      + + +    S I           P      R        
Sbjct: 28  ISQQSLKDSISNDFSDKAETNEKVKRIFEQSQIKTRHLVRDYTKPENSIKFRHLETITDV 87

Query: 99  LQDGIDEMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDI 158
                  + +  + +  + L   G    +I  +V   S   I+P ++ ++I+   + KD+
Sbjct: 88  NNQFKKVVPDLAQQACLRALKDWGGDKGDITHIVSVTSTGIIIPDVNFKLIDLLGLNKDV 147

Query: 159 KVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSMILANCLFR 218
           +  +L  MGC A L S+    S+ K       +VV +E  S ++ + +    ++A+ +F 
Sbjct: 148 ERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVCTEVCSLHFSNTDGGDQMVASSIFA 207

Query: 219 SGGAVILLSNKRSLERNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLPK 278
            G A  ++     +E   L+++ C +        ++    V   +++G     L  ++P 
Sbjct: 208 DGSAAYIIGCNPRIEETPLYEVMCSINRSF---PNTENAMVWDLEKEGW-NLGLDASIPI 263

Query: 279 AATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCIH 338
                              +  LL                K + +           F IH
Sbjct: 264 VIGSGIEAF----------VDTLL---------------DKAKLQTSTAISAKDCEFLIH 298

Query: 339 TGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLM 398
           TGGK+++  I  SL +     +      H +GN S+AS+ +V+ +    K        + 
Sbjct: 299 TGGKSILMNIENSLGIDPKQTKNTWDVYHAYGNMSSASVIFVMDHARKSK--SLPTYSIS 356

Query: 399 ISFGAGFKCNSCVWEVV 415
           ++FG G     C  + V
Sbjct: 357 LAFGPGLAFEGCFLKNV 373
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A Length = 387 Back     alignment and structure
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A Length = 387 Back     alignment and structure
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} Length = 413 Back     alignment and structure
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A Length = 413 Back     alignment and structure
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} Length = 465 Back     alignment and structure
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A Length = 393 Back     alignment and structure
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 Length = 382 Back     alignment and structure
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A Length = 393 Back     alignment and structure
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} Length = 392 Back     alignment and structure
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A Length = 345 Back     alignment and structure
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} Length = 354 Back     alignment and structure
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A Length = 365 Back     alignment and structure
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A Length = 313 Back     alignment and structure
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} Length = 333 Back     alignment and structure
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} Length = 309 Back     alignment and structure
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* Length = 357 Back     alignment and structure
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} Length = 323 Back     alignment and structure
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 Length = 322 Back     alignment and structure
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 Length = 339 Back     alignment and structure
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* Length = 359 Back     alignment and structure
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* Length = 317 Back     alignment and structure
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A Length = 335 Back     alignment and structure
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} Length = 331 Back     alignment and structure
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* Length = 321 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* Length = 396 Back     alignment and structure
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* Length = 388 Back     alignment and structure
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} Length = 478 Back     alignment and structure
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* Length = 450 Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Length = 979 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query465
4ewp_A350 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans 100.0
3e1h_A465 PKSIIINC, putative uncharacterized protein; resorc 100.0
3gwa_A365 3-oxoacyl-(acyl-carrier-protein) synthase III; str 100.0
3oit_A387 OS07G0271500 protein; type III polyketide synthase 100.0
3ov2_A393 Curcumin synthase; type III polyketide synthase, t 100.0
3il6_A321 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 100.0
3euo_A379 Type III pentaketide synthase; alpha helix, acyltr 100.0
3il3_A323 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 100.0
4dfe_A333 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci 100.0
3v7i_A413 Putative polyketide synthase; type III polyketide 100.0
4efi_A354 3-oxoacyl-(acyl-carrier protein) synthase; structu 100.0
2h84_A374 Steely1; thiolase-fold, type III polyketide syntha 100.0
1i88_A389 CHS2, chalcone synthase 2; polyketide synthase, tr 100.0
3awk_A402 Chalcone synthase-like polyketide synthase; type I 100.0
3h78_A359 PQS biosynthetic enzyme; PQSD, anthranilic acid, a 100.0
2p0u_A413 Stilbenecarboxylate synthase 2; polyketide synthas 100.0
3led_A392 3-oxoacyl-acyl carrier protein synthase III; struc 100.0
1xes_A413 Dihydropinosylvin synthase; native structure, tran 100.0
3s21_A345 3-oxoacyl-[ACP] synthase III; non-decarboxylative 100.0
3a5r_A387 Benzalacetone synthase; chalcone synthase, type II 100.0
1ee0_A402 2-pyrone synthase; polyketide synthase, thiolase f 100.0
1ted_A393 PKS18; thiolase fold, substrate binding tunnel, tr 100.0
1u0m_A382 Putative polyketide synthase; type III polyketide 100.0
2d3m_A406 Pentaketide chromone synthase; chalcone synthase, 100.0
3s3l_A357 CERJ; acyltransferase, FABH homologue, KS III homo 100.0
2x3e_A331 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, 100.0
1mzj_A339 Beta-ketoacylsynthase III; beta-ketosynthase, arom 100.0
1hnj_A317 Beta-ketoacyl-acyl carrier protein synthase III; F 100.0
3tsy_A979 Fusion protein 4-coumarate--COA ligase 1, resvera 100.0
2v4w_A460 Hydroxymethylglutaryl-COA synthase, mitochondrial; 100.0
1zow_A313 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB 100.0
2ebd_A309 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 100.0
3v4n_A388 HMG-COA synthase; hydroxymethylglutaryl-COA syntha 100.0
2p8u_A478 Hydroxymethylglutaryl-COA synthase, cytoplasmic; h 100.0
1ub7_A322 3-oxoacyl-[acyl-carrier protein] synthase; fatty a 100.0
1u6e_A335 3-oxoacyl-[acyl-carrier-protein] synthase III; tra 100.0
3sqz_A425 Putative hydroxymethylglutaryl-COA synthase; thiol 100.0
1xpm_A396 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s 100.0
2f82_A450 HMG-COA synthase; HMGS1, transferase; 2.10A {Brass 100.0
2wya_A460 Hydroxymethylglutaryl-COA synthase, mitochondrial; 100.0
3lma_A347 Stage V sporulation protein AD (spovad); NESG, str 99.88
3ho9_A427 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, 99.74
3o04_A413 LMO2201 protein, beta-keto-acyl carrier protein sy 99.74
4e1l_A395 Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, 99.74
1tqy_A424 Beta-ketoacyl synthase/acyl transferase; alpha-bet 99.74
2gqd_A437 3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli 99.74
3ss6_A394 Acetyl-COA acetyltransferase; structural genomics, 99.73
4dd5_A396 Acetyl-COA acetyltransferase; structural genomics, 99.72
1j3n_A408 3-oxoacyl-(acyl-carrier protein) synthase II; cond 99.72
3kzu_A428 3-oxoacyl-(acyl-carrier-protein) synthase II; seat 99.69
1e5m_A416 KAS II, beta ketoacyl acyl carrier protein synthas 99.69
1ox0_A430 Beta ketoacyl-acyl carrier protein synthase; trans 99.67
2gp6_A434 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol 99.67
2iwz_A438 3-oxoacyl-[acyl-carrier-protein] synthase; mitocho 99.66
3svk_A407 Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, 99.66
3goa_A387 3-ketoacyl-COA thiolase; metabolism, fatty acid, p 99.64
1tqy_B415 Actinorhodin polyketide putative beta-ketoacyl SY; 99.64
4ewg_A412 Beta-ketoacyl synthase; ssgcid, structural genomic 99.64
4ddo_A451 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci 99.63
2vu1_A392 Acetyl-COA acetyltransferase; acyltransferase, PHB 99.6
1ulq_A401 Putative acetyl-COA acetyltransferase; structural 99.59
1wl4_A397 Acetyl-coenzyme A acetyltransferase 2; thiolase fo 99.59
2vba_A406 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop 99.58
3mqd_A428 Beta-ketoacyl synthase; ssgcid, ALS collaborative 99.58
1wdk_C390 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame 99.56
2wge_A416 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta 99.56
2ib8_A395 Acetyl-COA acetyltransferase; thiolase fold, potas 99.55
2ix4_A431 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke 99.54
2wu9_A442 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o 99.54
1afw_A393 3-ketoacetyl-COA thiolase; fatty acid metabolism; 99.53
2iik_A418 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m 99.53
2qo3_A 915 Eryaii erythromycin polyketide synthase modules 3; 99.49
2hg4_A 917 DEBS, 6-deoxyerythronolide B synthase; ketosynthas 99.47
3hhd_A 965 Fatty acid synthase; transferase, multienzyme, meg 99.43
4egv_A 520 Acetyl-COA acetyltransferase; NEW SUB-family, thio 99.18
3zen_D3089 Fatty acid synthase; transferase, mycolic acid bio 98.9
2vz8_A 2512 Fatty acid synthase; transferase, phosphopantethei 98.63
2uv9_A 1878 Fatty acid synthase alpha subunits; fungal, dehydr 98.09
2pff_A 1688 Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl 98.01
2uv8_A 1887 Fatty acid synthase subunit alpha (FAS2); fatty ac 97.6
3lma_A347 Stage V sporulation protein AD (spovad); NESG, str 94.44
3il3_A323 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 93.77
2x3e_A331 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, 93.74
1mzj_A339 Beta-ketoacylsynthase III; beta-ketosynthase, arom 93.71
1u6e_A335 3-oxoacyl-[acyl-carrier-protein] synthase III; tra 93.37
4ewp_A350 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans 93.22
3h78_A359 PQS biosynthetic enzyme; PQSD, anthranilic acid, a 92.98
1zow_A313 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB 92.94
4dfe_A333 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci 92.85
3s21_A345 3-oxoacyl-[ACP] synthase III; non-decarboxylative 92.73
3gwa_A365 3-oxoacyl-(acyl-carrier-protein) synthase III; str 92.69
1hnj_A317 Beta-ketoacyl-acyl carrier protein synthase III; F 92.53
2ebd_A309 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 92.51
4efi_A354 3-oxoacyl-(acyl-carrier protein) synthase; structu 92.32
1ub7_A322 3-oxoacyl-[acyl-carrier protein] synthase; fatty a 92.1
1ted_A393 PKS18; thiolase fold, substrate binding tunnel, tr 90.39
4e1l_A395 Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, 90.34
1u0m_A382 Putative polyketide synthase; type III polyketide 90.24
3svk_A407 Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, 90.23
1ulq_A401 Putative acetyl-COA acetyltransferase; structural 89.86
3ss6_A394 Acetyl-COA acetyltransferase; structural genomics, 89.32
3s3l_A357 CERJ; acyltransferase, FABH homologue, KS III homo 89.23
4dd5_A396 Acetyl-COA acetyltransferase; structural genomics, 87.62
3led_A392 3-oxoacyl-acyl carrier protein synthase III; struc 86.66
2h84_A374 Steely1; thiolase-fold, type III polyketide syntha 85.41
1wl4_A397 Acetyl-coenzyme A acetyltransferase 2; thiolase fo 85.15
2vu1_A392 Acetyl-COA acetyltransferase; acyltransferase, PHB 83.76
1wdk_C390 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame 83.36
1xpm_A396 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s 83.31
3tsy_A979 Fusion protein 4-coumarate--COA ligase 1, resvera 83.1
1xho_A148 Chorismate mutase; southeast collaboratory for str 81.73
3goa_A387 3-ketoacyl-COA thiolase; metabolism, fatty acid, p 81.31
2d3m_A406 Pentaketide chromone synthase; chalcone synthase, 80.06
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} Back     alignment and structure
Probab=100.00  E-value=4.9e-56  Score=451.93  Aligned_cols=330  Identities=17%  Similarity=0.238  Sum_probs=262.9

Q ss_pred             cCCCceEEEeeeeecCCCCCccCHHHHHHHHHhhccCCcchHHHHHHHHHHcCccceEeecCccccCCCCCCChhhhhhh
Q 039047           26 KRDKECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQTYSPRIMFAGREDNPTLQDGIDE  105 (465)
Q Consensus        26 ~r~~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~~r~~~~~~~~~~~~~~~t~~~~~~e  105 (465)
                      .||...+|+++|.|+|++  +|+|+|+.+.+.      ..+    +||.+++||++|+++.++     |          .
T Consensus         9 ~~~~~srI~g~g~ylP~~--~v~n~el~~~~~------~~~----e~I~~rtGI~~R~~a~~~-----e----------~   61 (350)
T 4ewp_A            9 ERPAASRIVAVGAYRPAN--LVPNEDLIGPID------SSD----EWIRQRTGIVTRQRATAE-----E----------T   61 (350)
T ss_dssp             CCCSEEEEEEEEEECCSC--EEEHHHHTTTTT------CCH----HHHHHHHCCSEEECCCSS-----C----------C
T ss_pred             cCCCCCEEEEEEEEcCCC--eEcHHHHHHHhC------CCH----HHHHhccCceEEEEcCCC-----C----------C
Confidence            577888999999999997  899999887542      211    478899999999987653     2          3


Q ss_pred             HHHHHHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhc
Q 039047          106 MEEFFEDSIAKILDRSGISPKEIDILVVNI-SMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKT  184 (465)
Q Consensus       106 ~~~la~~Aa~~aL~~agi~~~dId~li~~~-s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~  184 (465)
                      +.+|+++|+++||+++|++|+|||+||++| ++++..|+++++|+++||++ ++.+||++ +||+|++.||++|.+++++
T Consensus        62 ~~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LGl~-~~~a~di~-~~C~g~~~aL~~A~~~i~~  139 (350)
T 4ewp_A           62 VPVMAVGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIGAT-PAPAYDVS-AACAGYCYGVAQADALVRS  139 (350)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTTCT-TSCEEEEE-CGGGHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhCCC-CceEEEee-cchhhHHHHHHHhhhhhhC
Confidence            568999999999999999999999999975 67889999999999999998 57899999 5999999999999999999


Q ss_pred             CCCCEEEEEEecCCCCCCCCCCCccchhhhhhccccceEEEEecCCccccccceeeeceEEeeeCCCCCCCccceeccCC
Q 039047          185 YKNMNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRTHHGARDDSYGCCVQTEDE  264 (465)
Q Consensus       185 g~~~~aLVV~~E~~s~~~~~~~dr~~~~~~~lfgDGaaA~lLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~  264 (465)
                      ++.++||||++|.+|.. .++.++..   ..+|||||+|+||++.+...         +....+++|++.+..+..+.. 
T Consensus       140 g~~~~~Lvv~~E~~s~~-~d~~~~~~---~~lfgDGA~A~vl~~~~~~~---------~~~~~~~sdg~~~~~~~~~~~-  205 (350)
T 4ewp_A          140 GTARHVLVVGVERLSDV-VDPTDRSI---SFLLGDGAGAVIVAASDEPG---------ISPSVWGSDGERWSTISMTHS-  205 (350)
T ss_dssp             TSCSEEEEEEEEEGGGG-CCTTCTTT---GGGBCEEEEEEEEEEESSCC---------BCCCEEEECGGGTTSEEESSC-
T ss_pred             CCccceeEeeeeeceec-cccccccc---ccccccchheeeeecccCCC---------ccceeeeecccccceeeecCC-
Confidence            99999999999999973 45567765   78999999999999876431         222344556655554443221 


Q ss_pred             CCCCceecCCChhHHHHHHHhhhh----------hhcCCCcchHHHHHHHHHHHHHHHHhccCCcCCcCCCCCccCCccE
Q 039047          265 QGRPGFHLGKNLPKAATRAFVDNL----------RVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDH  334 (465)
Q Consensus       265 ~G~~g~~l~~d~p~~~~~~~~~~i----------~~~~p~~l~~~e~~~~a~~~v~~~~l~~~~l~~~g~~~~~~~did~  334 (465)
                          +..    .+.. ........          .....+.|++.++|++++..+++.+.+.  ++++|+.   .+||||
T Consensus       206 ----~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~~~i~~~--L~~~gl~---~~did~  271 (350)
T 4ewp_A          206 ----QLE----LRDA-VEHARTTGDASAITGAEGMLWPTLRQDGPSVFRWAVWSMAKVAREA--LDAAGVE---PEDLAA  271 (350)
T ss_dssp             ----HHH----HHHH-HHHHHHHSCCTTTTTCSSCSSCCEEECHHHHHHHHHHTHHHHHHHH--HHHHTCC---GGGEEE
T ss_pred             ----ccc----cCcc-cccccccCCccccccccccccceeEehhHHHHHHHHHhhhHHHHHH--HHhhcCC---hhHhce
Confidence                000    0000 00000000          0001234668899999887666543322  4567888   589999


Q ss_pred             EEecCCCHHHHHHHHhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHHHcCCCCCCCEEEEEeeCchhhhheeeeEE
Q 039047          335 FCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVWEV  414 (465)
Q Consensus       335 ~~~H~~~~~ii~~i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~~~g~l~~Gd~vl~~sfGaG~~~~~~v~~~  414 (465)
                      |++||+|+++++.+++.||+|++++.+  .++++||||||||+|++|++++++|++++||+|+++|||+||+|+++||||
T Consensus       272 ~v~Hq~~~~i~~~~~~~Lgl~~~~~~~--~~l~~~GNtssasi~~~L~~~~~~g~~~~Gd~vll~~fG~G~t~~~~vlr~  349 (350)
T 4ewp_A          272 FIPHQANMRIIDEFAKQLKLPESVVVA--RDIADAGNTSAASIPLAMHRLLEENPELSGGLALQIGFGAGLVYGAQVVRL  349 (350)
T ss_dssp             EEECCSCHHHHHHHHHHTTCCTTSEEC--CTHHHHCBCGGGHHHHHHHHHHHHCGGGTTSEEEEEEEETTTEEEEEEEEC
T ss_pred             EEecCCCHHHHHHHHHHcCcChHhEEe--cccccccchHHHHHHHHHHHHHHhCCCCCcCEEEEEEEchhhEeEEEEEEe
Confidence            999999999999999999999999753  689999999999999999999999999999999999999999999999997
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} Back     alignment and structure
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A Back     alignment and structure
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A Back     alignment and structure
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A Back     alignment and structure
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* Back     alignment and structure
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} Back     alignment and structure
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} Back     alignment and structure
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} Back     alignment and structure
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} Back     alignment and structure
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} Back     alignment and structure
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* Back     alignment and structure
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} Back     alignment and structure
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A Back     alignment and structure
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A Back     alignment and structure
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A Back     alignment and structure
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A Back     alignment and structure
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* Back     alignment and structure
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} Back     alignment and structure
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Back     alignment and structure
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A Back     alignment and structure
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} Back     alignment and structure
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* Back     alignment and structure
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} Back     alignment and structure
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A Back     alignment and structure
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* Back     alignment and structure
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* Back     alignment and structure
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens} Back     alignment and structure
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A Back     alignment and structure
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A Back     alignment and structure
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} Back     alignment and structure
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} Back     alignment and structure
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} Back     alignment and structure
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} Back     alignment and structure
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} Back     alignment and structure
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A Back     alignment and structure
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A Back     alignment and structure
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} Back     alignment and structure
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A Back     alignment and structure
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} Back     alignment and structure
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} Back     alignment and structure
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} Back     alignment and structure
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* Back     alignment and structure
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... Back     alignment and structure
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A Back     alignment and structure
>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... Back     alignment and structure
>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* Back     alignment and structure
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* Back     alignment and structure
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* Back     alignment and structure
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* Back     alignment and structure
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A Back     alignment and structure
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A Back     alignment and structure
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A Back     alignment and structure
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} Back     alignment and structure
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Back     alignment and structure
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Back     alignment and structure
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Back     alignment and structure
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis} Back     alignment and structure
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* Back     alignment and structure
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Back     alignment and structure
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Back     alignment and structure
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Back     alignment and structure
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Back     alignment and structure
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A Back     alignment and structure
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} Back     alignment and structure
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} Back     alignment and structure
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A Back     alignment and structure
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} Back     alignment and structure
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* Back     alignment and structure
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A Back     alignment and structure
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} Back     alignment and structure
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A Back     alignment and structure
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A Back     alignment and structure
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* Back     alignment and structure
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} Back     alignment and structure
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} Back     alignment and structure
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A Back     alignment and structure
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} Back     alignment and structure
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} Back     alignment and structure
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} Back     alignment and structure
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* Back     alignment and structure
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} Back     alignment and structure
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} Back     alignment and structure
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} Back     alignment and structure
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A Back     alignment and structure
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... Back     alignment and structure
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* Back     alignment and structure
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Back     alignment and structure
>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2 Back     alignment and structure
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} Back     alignment and structure
>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 465
d1teda_372 c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacte 7e-47
d1ee0a2160 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcon 1e-20
d1u0ma1200 c.95.1.2 (A:2-201) Putative polyketide synthase SC 3e-19
d1u0ma2148 c.95.1.2 (A:202-349) Putative polyketide synthase 1e-18
d1u0ua2156 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {S 9e-18
d1bi5a2154 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (M 1e-17
d1bi5a1235 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Med 2e-16
d1mzja2153 c.95.1.2 (A:184-336) Priming beta-ketosynthase fro 1e-15
d1u6ea2148 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (Fa 5e-14
d1ub7a2149 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (Fa 1e-13
d1hnja2143 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (Fa 3e-12
d1xpma2221 c.95.1.2 (A:168-388) 3-hydroxy-3-methylglutaryl Co 1e-04
>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 372 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Polyketide synthase PKS18
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  164 bits (415), Expect = 7e-47
 Identities = 64/368 (17%), Positives = 127/368 (34%), Gaps = 42/368 (11%)

Query: 59  TKNLGLNEYKFLLKAIVS-SGIGEQTYSPRIMFAGREDNPTLQDGIDE-MEEFFEDSIA- 115
            +       +  +  +   S I  +  +   + A  +        I + M  F+E ++  
Sbjct: 36  AELFLDPGQRERIPRVYQKSRITTRRMAVDPLDAKFDVFRREPATIRDRMHLFYEHAVPL 95

Query: 116 ------KILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCS 169
                 + L        EI +LV+  S   I P +   I+    +   I    +  MGC+
Sbjct: 96  AVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSISRVVVNFMGCA 155

Query: 170 ASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNK 229
           A++ ++    +  + +  M A+VV  E  S N    +D + ++ + LF  G A +++   
Sbjct: 156 AAMNALGTATNYVRAHPAMKALVVCIELCSVNAVFADDINDVVIHSLFGDGCAALVIGAS 215

Query: 230 RSLERNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLPKAATRAFVDNLR 289
           +  E+    K+           +   G  +            L +NLP            
Sbjct: 216 QVQEKLEPGKVVVRSSFSQLLDNTEDGIVLGVNHN--GITCELSENLPG----------- 262

Query: 290 VISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCIHTGGKAVIDGIG 349
                                  ++    +     G+     +D + IH GG  +I+   
Sbjct: 263 ------------------YIFSGVAPVVTEMLWDNGLQISD-IDLWAIHPGGPKIIEQSV 303

Query: 350 FSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKG-DRVLMISFGAGFKCN 408
            SL ++      +   L RFGN  + SL +VL  M  +    K     +  +FG G    
Sbjct: 304 RSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQQAESAKAISTGVAFAFGPGVTVE 363

Query: 409 SCVWEVVR 416
             +++++R
Sbjct: 364 GMLFDIIR 371
>d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} Length = 160 Back     information, alignment and structure
>d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Length = 200 Back     information, alignment and structure
>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Length = 148 Back     information, alignment and structure
>d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} Length = 156 Back     information, alignment and structure
>d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Length = 154 Back     information, alignment and structure
>d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Length = 235 Back     information, alignment and structure
>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Length = 153 Back     information, alignment and structure
>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 148 Back     information, alignment and structure
>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Length = 149 Back     information, alignment and structure
>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Length = 143 Back     information, alignment and structure
>d1xpma2 c.95.1.2 (A:168-388) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} Length = 221 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query465
d1teda_372 Polyketide synthase PKS18 {Mycobacterium tuberculo 100.0
d1u0ma1200 Putative polyketide synthase SCO1206 {Streptomyces 100.0
d1bi5a1235 Chalcone synthase {Alfalfa (Medicago sativa) [TaxI 99.97
d1u6ea1184 Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu 99.97
d1hnja1174 Ketoacyl-ACP synthase III (FabH) {Escherichia coli 99.97
d1mzja1181 Priming beta-ketosynthase from the r1128 polyketid 99.97
d1ub7a1172 Ketoacyl-ACP synthase III (FabH) {Thermus thermoph 99.97
d1xpma1166 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap 99.94
d1hnja2143 Ketoacyl-ACP synthase III (FabH) {Escherichia coli 99.92
d1ub7a2149 Ketoacyl-ACP synthase III (FabH) {Thermus thermoph 99.9
d1mzja2153 Priming beta-ketosynthase from the r1128 polyketid 99.9
d1u6ea2148 Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu 99.89
d1ee0a2160 Pyrone synthase (PyS, chalcone synthase 2) {Gerber 99.89
d1u0ua2156 Dihydropinosylvin synthase {Scots pine (Pinus sylv 99.88
d1bi5a2154 Chalcone synthase {Alfalfa (Medicago sativa) [TaxI 99.88
d1u0ma2148 Putative polyketide synthase SCO1206 {Streptomyces 99.88
d1j3na1249 Beta-ketoacyl-ACP synthase II {Thermus thermophilu 98.99
d1ulqa1273 Beta-ketoadipyl CoA thiolase {Thermus thermophilus 98.98
d1m3ka1268 Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 98.94
d2gfva1250 Beta-ketoacyl-ACP synthase II {Escherichia coli [T 98.87
d1xpma2221 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap 98.86
d1ox0a1256 Beta-ketoacyl-ACP synthase II {Streptococcus pneum 98.85
d1wdkc1262 Fatty oxidation complex beta subunit (3-ketoacyl-C 98.81
d1e5ma1250 Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ 98.7
d1afwa1269 Thiolase {Baker's yeast (Saccharomyces cerevisiae) 98.59
d1tqya1216 Actinorhodin polyketide putative beta-ketoacyl syn 98.42
d2vbaa1253 Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta 98.41
d2ix4a1270 Beta-ketoacyl-ACP synthase II {Thale cress (Arabid 98.41
d1tqyb1208 Actinorhodin polyketide putative beta-ketoacyl syn 98.24
d1u6ea2148 Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu 96.87
d1ub7a2149 Ketoacyl-ACP synthase III (FabH) {Thermus thermoph 96.63
d1mzja2153 Priming beta-ketosynthase from the r1128 polyketid 96.03
d1hnja2143 Ketoacyl-ACP synthase III (FabH) {Escherichia coli 95.87
d1m3ka2124 Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 93.74
d1u0ma2148 Putative polyketide synthase SCO1206 {Streptomyces 92.72
d1ulqa2125 Beta-ketoadipyl CoA thiolase {Thermus thermophilus 91.06
d1teda_372 Polyketide synthase PKS18 {Mycobacterium tuberculo 90.07
d1tqyb2194 Actinorhodin polyketide putative beta-ketoacyl syn 89.51
d1afwa2124 Thiolase {Baker's yeast (Saccharomyces cerevisiae) 88.97
d1tqya2205 Actinorhodin polyketide putative beta-ketoacyl syn 88.5
d1wdkc2128 Fatty oxidation complex beta subunit (3-ketoacyl-C 87.31
d1afwa2124 Thiolase {Baker's yeast (Saccharomyces cerevisiae) 80.52
>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Polyketide synthase PKS18
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=6.8e-53  Score=430.00  Aligned_cols=350  Identities=19%  Similarity=0.231  Sum_probs=264.3

Q ss_pred             ceEEEeeeeecCCCCCccCHHHHHHHHHhhccCCcchHHHHHHHHHHcCccceEeecCccccC----CCCCCC----hhh
Q 039047           30 ECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQTYSPRIMFAG----REDNPT----LQD  101 (465)
Q Consensus        30 ~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~~r~~~~~~~~~~----~~~~~t----~~~  101 (465)
                      ..+|.++|+|+|++  +|+|+|+.+.+..... +++..+.+.+|++++||++||++.+.....    .+..++    +..
T Consensus        11 ~a~I~g~g~~~P~~--~v~n~e~~~~~~~~~~-~~~~~~~~~ri~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~r~~~   87 (372)
T d1teda_          11 VAVIEGLATGTPRR--VVNQSDAADRVAELFL-DPGQRERIPRVYQKSRITTRRMAVDPLDAKFDVFRREPATIRDRMHL   87 (372)
T ss_dssp             EEEEEEEEEECCSC--EEEHHHHHHHHHTC-----CCTTHHHHHHHTSCCSEEECSSCTTSTTHHHHTTCSSCHHHHHHH
T ss_pred             eEEEEEEEEeCCCe--EEcHHHHHHHHHhhcC-ChHHHHHHHHHHHccCCcccceeccccccchhhhhhcCCCHHHHHHH
Confidence            47899999999997  9999999999875432 344556678999999999999875432100    011123    444


Q ss_pred             hhhhHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHH
Q 039047          102 GIDEMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSV  181 (465)
Q Consensus       102 ~~~e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~l  181 (465)
                      +.|++.+|+.+|+++||+++|++|+|||+||+++++++..|+++++|+++||+++++..++++++||+|++.||++|.++
T Consensus        88 ~~e~~~~la~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~  167 (372)
T d1teda_          88 FYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNY  167 (372)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHH
T ss_pred             HHhHHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCchHHHHHHhhhccCCceeEeeccccCccHHHHHHHHHHHH
Confidence            67899999999999999999999999999999877788899999999999999988899999878999999999999999


Q ss_pred             HhcCCCCEEEEEEecCCCCCCCCCCCccchhhhhhccccceEEEEecCCccccc--cceeeeceEEeeeCCCCCCCccce
Q 039047          182 FKTYKNMNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERN--ALFKLKCLVRTHHGARDDSYGCCV  259 (465)
Q Consensus       182 l~~g~~~~aLVV~~E~~s~~~~~~~dr~~~~~~~lfgDGaaA~lLs~~~~~~~~--~~~~L~~~~~t~~~sd~~~~~~~~  259 (465)
                      +++++.++||||++|.+|.++...++....++.++|||||+|+||++++.....  ..+.+.... ++...+.  .+.+.
T Consensus       168 l~sg~~~~~LVV~~E~~s~~~~~~d~~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~  244 (372)
T d1teda_         168 VRAHPAMKALVVCIELCSVNAVFADDINDVVIHSLFGDGCAALVIGASQVQEKLEPGKVVVRSSF-SQLLDNT--EDGIV  244 (372)
T ss_dssp             HHHSTTCEEEEEEEEECGGGCCCCSSHHHHHHHHHBCEEEEEEEEEEECTTSCCCTTCEEEEEEE-EEECTTC--TTSEE
T ss_pred             HhcCCCccceeeeehhhcccccCCCcchhhhhhhhhcccceeEEeccCCcccccCCceeEEeccc-ccccCCC--ccccc
Confidence            999999999999999998865554555555668899999999999987654211  112111111 1111111  11111


Q ss_pred             eccCCCCCCceecCCChhHHHHHHHhhhhhhcCCCcchHHHHHHHHHHHHHHHHhccCCcCCcCCCCCccCCccEEEecC
Q 039047          260 QTEDEQGRPGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCIHT  339 (465)
Q Consensus       260 ~~~d~~G~~g~~l~~d~p~~~~~~~~~~i~~~~p~~l~~~e~~~~a~~~v~~~~l~~~~l~~~g~~~~~~~did~~~~H~  339 (465)
                      ...++.+ .-+..+++++..+.+.                      +..+.++++     +++|+.   .+|||+|++||
T Consensus       245 ~~~~~~~-~~~~~~~~~~~~~~~~----------------------~~~~i~~~L-----~~~gl~---~~did~~i~Hq  293 (372)
T d1teda_         245 LGVNHNG-ITCELSENLPGYIFSG----------------------VAPVVTEML-----WDNGLQ---ISDIDLWAIHP  293 (372)
T ss_dssp             EEEETTE-EEEEECTTHHHHHHHH----------------------HHHHHHHHH-----HHTTCC---GGGCSCEEECC
T ss_pred             cCCCCCc-ceeechHHHHHHHHHH----------------------HHHHHHHHH-----HhcCCC---HHHhhhhhccC
Confidence            1111111 1112233333221111                      112233444     456777   58999999999


Q ss_pred             CCHHHHHHHHhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHHHcCCCCCC-CEEEEEeeCchhhhheeeeEEEe
Q 039047          340 GGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKG-DRVLMISFGAGFKCNSCVWEVVR  416 (465)
Q Consensus       340 ~~~~ii~~i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~~~g~l~~G-d~vl~~sfGaG~~~~~~v~~~~~  416 (465)
                      +|+.+++.+++.||++++++..++.++.+||||+|+|+|+.|++++++|++++| |++++++||+|++|+++|||+++
T Consensus       294 ~~~~i~~~i~~~Lgl~~ek~~~s~~~l~~~GN~~sasip~~L~~~l~~g~~~~g~d~vll~~fG~G~s~~~~ll~~~~  371 (372)
T d1teda_         294 GGPKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQQAESAKAISTGVAFAFGPGVTVEGMLFDIIR  371 (372)
T ss_dssp             SCHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHHHHHHHSCSSSSSSEEEEEEEEETTTEEEEEEEEECC
T ss_pred             ccHHHHHHHHHHcCCCHHHhhhhHHHHhccCCcHHHHHHHHHHHHHHhCCCCCCCCEEEEEEEcHHHhHHHHhheeec
Confidence            999999999999999999998888899999999999999999999999988776 89999999999999999999975
>d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Back     information, alignment and structure
>d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Back     information, alignment and structure
>d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Back     information, alignment and structure
>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} Back     information, alignment and structure
>d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} Back     information, alignment and structure
>d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Back     information, alignment and structure
>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Back     information, alignment and structure
>d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1xpma2 c.95.1.2 (A:168-388) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Back     information, alignment and structure
>d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Back     information, alignment and structure
>d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Back     information, alignment and structure
>d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Back     information, alignment and structure
>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Back     information, alignment and structure
>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Back     information, alignment and structure
>d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure