Citrus Sinensis ID: 039049

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-----
Protein Sequence
MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELGFVGFKSVPQ
Secondary Structure (PSIPRED)
cccEEEcccccHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHcccccccEEEEEccccccccHHHHHccccEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHcccccEEEEEccccEEEEEcccccccccccccccccHHHHcccccHHHHHHHHHHHHHHHHHHHccccEEEEccccccccccccccccHHHHHHHHHcccccccccccccEEEHHHHHHHHHHHcccccccccEEEEcccccHHHHHHHHHHHcccccccccccccccccccEEcccHHHHHccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEEccccHHHHHHHHHHHHcccccEEEEEcccEHHHHHHHHcccccEHHEEEEEHcHHccccHHHHHcccccEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEcccEEEEccccccccEEcccccccHHHHHHcccEHHHHHHHHHHHHHHHHHHccccEEEEcccEEEcccccccccHHHHHHHHHHccccccccHcEEEEEEHHHHHHHHHHHHcccccccEEEEEcccccHHHHHHHHHHHcccccccccccccccccccEEEcHHHHHHccccEcccccc
Coil and Loop (DISEMBL)
mpeycvtggtgFIAAHLVKALLDkghmvrttvrdpedlskvgflWELNGAEERLKIMKADLlmegsfdeaiqgvdgvfhtaspvlvpydnniqatlidpcikgTLNVLSSCKKAKSVKRVVLTSscssiryrhdaqqvsplneshwsdpdyckhYNLWYAYAKTIAEKEAWRIAKdcgidmvvvnpsfvvgpllapqptSTLLLILAMVKGlrgeypnttvgfvHIDDVVGAHILAMEETRASGRLICSSSVAHWSPIIEMLKatypsypyeskcskqegdnsphsmdtsklfelgfvgfksvpq
Flexible Loop (DISEMBL)
mpeycvtggTGFIAAHLVKALLDKGHMVrttvrdpedlskvgflwELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSsckkaksvkRVVLTsscssiryrhdaqqvsplneshwsdpDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMdtsklfelgfvgfksvpq
Low Complexity Region (SEG)
MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELGFVGFKSVPQ
Disordered region (IsUnstruct)
***YCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRASGRLICSSSVAHWSPIIEMLKATYPSYP**********************FELGFVG******
Disordered Region (DISOPRED)
MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELGFVGFKSVP*
Disordered Region (DISEMBL)
MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRASGRLICSSSVAHWSPIIEMLKATYPSYPYE**************MDTSKLFELGFVGFKSVPQ
Disordered Region (DISPRO)
MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELGFVGFKSV**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELGFVGFKSVPQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	305	2.2.26 [Sep-21-2011]
Q9CA28	321	Tetraketide alpha-pyrone	yes	no	1.0	0.950	0.728	1e-137
Q500U8	326	Tetraketide alpha-pyrone	no	no	0.973	0.911	0.476	6e-72
Q9XES5	348	Bifunctional dihydroflavo	N/A	no	0.950	0.833	0.393	2e-53
Q84KP0	347	Bifunctional dihydroflavo	N/A	no	0.950	0.835	0.390	5e-53
P51105	366	Dihydroflavonol-4-reducta	N/A	no	0.950	0.792	0.400	2e-51
P51110	337	Dihydroflavonol-4-reducta	no	no	0.950	0.860	0.387	3e-50
P14720	380	Dihydroflavonol-4-reducta	N/A	no	0.963	0.773	0.388	3e-50
P51103	364	Dihydroflavonol-4-reducta	N/A	no	0.960	0.804	0.4	2e-49
Q9S9N9	344	Cinnamoyl-CoA reductase 1	no	no	0.960	0.851	0.397	8e-49
Q9SAH9	332	Cinnamoyl-CoA reductase 2	no	no	0.960	0.882	0.397	2e-48

>sp|Q9CA28|TKPR2_ARATH Tetraketide alpha-pyrone reductase 2 OS=Arabidopsis thaliana GN=TKPR2 PE=2 SV=1

 Score =  488 bits (1257), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 223/306 (72%), Positives = 268/306 (87%), Gaps = 1/306 (0%)

Query: 1   MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKAD 60
           M EY VTGGTGFIA++++K+LL+ GH VRTTVR+P D  KVGFLWE  GA++RLKI++AD
Sbjct: 1   MSEYLVTGGTGFIASYIIKSLLELGHTVRTTVRNPRDEEKVGFLWEFQGAKQRLKILQAD 60

Query: 61  LLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAK-SVKR 119
           L +EGSFDEA+ GVDGVFHTASPVLVP D+NIQ TL+DP IKGT NV+SSC K+K ++KR
Sbjct: 61  LTVEGSFDEAVNGVDGVFHTASPVLVPQDHNIQETLVDPIIKGTTNVMSSCAKSKATLKR 120

Query: 120 VVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGI 179
           +VLTSSCSSIRYR DA + SPLNESHWSDP+YCK +NLWY YAKT+ E+EAWRIA++ G+
Sbjct: 121 IVLTSSCSSIRYRFDATEASPLNESHWSDPEYCKRFNLWYGYAKTLGEREAWRIAEEKGL 180

Query: 180 DMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEE 239
           D+VVVNPSFVVGPLL P+PTSTLL+ILA+ KGL GEYPN TVGFVHIDDVV AH+LAMEE
Sbjct: 181 DLVVVNPSFVVGPLLGPKPTSTLLMILAIAKGLAGEYPNFTVGFVHIDDVVAAHVLAMEE 240

Query: 240 TRASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELGFVG 299
            +ASGR+ICSSSVAHWS IIE+++  YP+YP+E+KCS +EGDNSPHSMDT K+ ELGF  
Sbjct: 241 PKASGRIICSSSVAHWSEIIELMRNKYPNYPFENKCSNKEGDNSPHSMDTRKIHELGFGS 300

Query: 300 FKSVPQ 305
           FKS+P+
Sbjct: 301 FKSLPE 306

May be involved in the biosynthesis of hydroxylated tetraketide compounds that serve as sporopollenin precursors (the main constituents of exine). Acts on tetraketide alpha-pyrones and reduces the carbonyl function on the tetraketide alkyl chain to a secondary alcohol function.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|Q500U8|TKPR1_ARATH Tetraketide alpha-pyrone reductase 1 OS=Arabidopsis thaliana GN=TKPR1 PE=2 SV=1

 Score =  271 bits (692), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 144/302 (47%), Positives = 199/302 (65%), Gaps = 5/302 (1%)

Query: 5   CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
           CVTG +GF+A+ LVK LL +G+ V  TVRDP +  K+  LW+L GA+ERL+++KADL+ E
Sbjct: 9   CVTGASGFLASWLVKRLLLEGYEVIGTVRDPGNEKKLAHLWKLEGAKERLRLVKADLMEE 68

Query: 65  GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
           GSFD AI G  GVFHTASPVL P  +N +  ++ P I+GTLNVL SC+K  S+KRVVLTS
Sbjct: 69  GSFDNAIMGCQGVFHTASPVLKP-TSNPEEEILRPAIEGTLNVLRSCRKNPSLKRVVLTS 127

Query: 125 SCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVV 184
           S S++R R D     PL+ES W+  + CK + +WYA +KT+AE+ AW+ +++ GID+V V
Sbjct: 128 SSSTVRIRDDFDPKIPLDESIWTSVELCKRFQVWYALSKTLAEQAAWKFSEENGIDLVTV 187

Query: 185 NPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYP-NTTVGFVHIDDVVGAHILAMEETRAS 243
            PSF+VGP L P   ST   +L ++KG   ++  +  +G+VHIDDV   HI+  E   A 
Sbjct: 188 LPSFLVGPSLPPDLCSTASDVLGLLKGETEKFQWHGQMGYVHIDDVARTHIVVFEHEAAQ 247

Query: 244 GRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELGFVGFKSV 303
           GR ICSS+V     ++  L A YPS P   +  K   +   +  DTSK+  LG + FKS+
Sbjct: 248 GRYICSSNVISLEELVSFLSARYPSLPIPKRFEKL--NRLHYDFDTSKIQSLG-LKFKSL 304

Query: 304 PQ 305
            +
Sbjct: 305 EE 306

Involved in the biosynthesis of hydroxylated tetraketide compounds that serve as sporopollenin precursors (the main constituents of exine). Is essential for pollen wall development. Acts on tetraketide alpha-pyrones and reduces the carbonyl function on the tetraketide alkyl chain to a secondary alcohol function.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9XES5|DFRA_MALDO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1

 Score =  209 bits (533), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 117/297 (39%), Positives = 173/297 (58%), Gaps = 7/297 (2%)

Query: 5   CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
           CVTG +GFI + LV  LL+ G+ VR TVRDP +  KV  L +L  AE  L + KADL  E
Sbjct: 9   CVTGASGFIGSWLVMRLLEHGYTVRATVRDPTNQKKVKHLLDLPKAETHLTLWKADLADE 68

Query: 65  GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
           GSFDEAIQG  GVFH A+P+      + +  +I P I G L++L +C+KAK+V+++V TS
Sbjct: 69  GSFDEAIQGCSGVFHVATPMDFE-SKDPENEVIKPTINGLLDILKACQKAKTVRKLVFTS 127

Query: 125 SCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNL--W-YAYAKTIAEKEAWRIAKDCGIDM 181
           S  ++      + V   +ES+WSD ++C+   +  W Y  +KT+AE+ AW+ AK+  ID 
Sbjct: 128 SAGTVNVEEHQKPV--YDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAKENNIDF 185

Query: 182 VVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG-FVHIDDVVGAHILAMEET 240
           + + P+ V+GP L P    +L+  L+ +      Y     G +VH+DD+  +HI   E  
Sbjct: 186 ITIIPTLVIGPFLMPSMPPSLITGLSPILRNESHYGIIKQGQYVHLDDLCLSHIYLYEHP 245

Query: 241 RASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELGF 297
           +A GR ICSS  A    +++ML+  YP Y   +K    + +  P    + KL E+GF
Sbjct: 246 KAEGRYICSSHDATIHELVKMLREKYPEYNIPTKFKGIDDNLEPVHFSSKKLREIGF 302

Bifunctional enzyme involved in the flavonoid metabolism. May use dihydroquercetin, dihydrokaempferol, eriodictyol, garbanzol (5-deoxydihydrokaempferol), dihydrofisetin (5-deoxydihydroquercetin), naringenin to a low extent (10%), but not 5-deoxynaringenin or butin (5-deoxyeriodictyol) as substrate.

Malus domestica (taxid: 3750)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 3

EC: 4

>sp|Q84KP0|DFRA_PYRCO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Pyrus communis GN=DFR PE=1 SV=1

 Score =  208 bits (529), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 116/297 (39%), Positives = 173/297 (58%), Gaps = 7/297 (2%)

Query: 5   CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
           CVTG +GFI + LV  LL+ G+ VR TVRDP +  KV  L +L  AE  L + KADL  E
Sbjct: 9   CVTGASGFIGSWLVMRLLEHGYTVRATVRDPTNQKKVKHLLDLPKAETHLTLWKADLADE 68

Query: 65  GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
           GSFDEAIQG  GVFH A+P+      + +  +I P I G L++L +C+KAK+V+++V TS
Sbjct: 69  GSFDEAIQGCSGVFHVATPMDFE-SRDPENEVIKPTINGLLDILKACQKAKTVRKLVFTS 127

Query: 125 SCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNL--W-YAYAKTIAEKEAWRIAKDCGIDM 181
           S  ++      + V   +ES+WSD ++C+   +  W Y  +KT+AE+ AW+ AK+  ID 
Sbjct: 128 SAGTVNVEEHQKPV--YDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAKENNIDF 185

Query: 182 VVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG-FVHIDDVVGAHILAMEET 240
           + + P+ V+GP L P    +L+  L+ +      Y     G +VH+DD+  +HI   +  
Sbjct: 186 ITIIPTLVIGPFLMPSMPPSLITGLSPILRNESHYGIIKQGQYVHLDDLCLSHIYLYKHP 245

Query: 241 RASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELGF 297
           +A GR ICSS  A    +++ML+  YP Y   +K    + +  P    + KL E+GF
Sbjct: 246 KAEGRYICSSHDATIHELVKMLREKYPEYNIPTKFKGIDDNLEPVHFSSKKLREIGF 302

Bifunctional enzyme involved in the flavonoid metabolism. May use dihydroquercetin, eriodictyol, garbanzol (5-deoxydihydrokaempferol), dihydrofisetin (5-deoxydihydroquercetin), dihydrokaempferol to a low extent (5%), but not naringenin, 5-deoxynaringenin or butin (5-deoxyeriodictyol) as substrate.

Pyrus communis (taxid: 23211)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 3

EC: 4

>sp|P51105|DFRA_GERHY Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=DFR PE=2 SV=1

 Score =  202 bits (515), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 119/297 (40%), Positives = 169/297 (56%), Gaps = 7/297 (2%)

Query: 5   CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
           CVTG  GFI + LV  LL++G++V  TVRDP DL KV  L EL  A+  LK+ KADL  E
Sbjct: 10  CVTGAAGFIGSWLVMRLLERGYVVHATVRDPGDLKKVKHLLELPKAQTNLKLWKADLTQE 69

Query: 65  GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
           GSFDEAIQG  GVFH A+P+      + +  +I P I+G L+++ SC KAK+VK++V TS
Sbjct: 70  GSFDEAIQGCHGVFHLATPMDFE-SKDPENEIIKPTIEGVLSIIRSCVKAKTVKKLVFTS 128

Query: 125 SCSSIRYRHDAQQVSPLNESHWSDPD--YCKHYNLW-YAYAKTIAEKEAWRIAKDCGIDM 181
           S  ++  +   +Q+   +ESHWSD D  Y K    W Y  +KT+AEK AW   K   I  
Sbjct: 129 SAGTVNGQE--KQLHVYDESHWSDLDFIYSKKMTAWMYFVSKTLAEKAAWDATKGNNISF 186

Query: 182 VVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG-FVHIDDVVGAHILAMEET 240
           + + P+ VVGP +      +L+  L+++ G    Y     G +VH+DD+   HI   E  
Sbjct: 187 ISIIPTLVVGPFITSTFPPSLVTALSLITGNEAHYSIIKQGQYVHLDDLCECHIYLYENP 246

Query: 241 RASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELGF 297
           +A GR ICSS  A    + +++K  +P Y   +K    + +    S  + KL + GF
Sbjct: 247 KAKGRYICSSHDATIHQLAKIIKDKWPEYYIPTKFPGIDEELPIVSFSSKKLIDTGF 303

Gerbera hybrida (taxid: 18101)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51110|DFRA_VITVI Dihydroflavonol-4-reductase OS=Vitis vinifera GN=DFR PE=1 SV=1

 Score =  199 bits (505), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 115/297 (38%), Positives = 167/297 (56%), Gaps = 7/297 (2%)

Query: 5   CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
           CVTG +GFI + LV  LL++   VR TVRDP ++ KV  L +L  AE  L + KADL  E
Sbjct: 9   CVTGASGFIGSWLVMRLLERRLTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADE 68

Query: 65  GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
           GSFDEAI+G  GVFH A+P+      + +  +I P I+G L ++ SC  AK+V+R+V TS
Sbjct: 69  GSFDEAIKGCTGVFHVATPMDFE-SKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTS 127

Query: 125 SCSSIRYRHDAQQVSPLNESHWSDPDYC--KHYNLW-YAYAKTIAEKEAWRIAKDCGIDM 181
           S  ++  +    Q+   +ES WSD ++C  K    W Y  +KT+AE+ AW+ AK+  ID 
Sbjct: 128 SAGTVNIQE--HQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDF 185

Query: 182 VVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG-FVHIDDVVGAHILAMEET 240
           + + P+ VVGP +      +L+  L+ + G    Y     G FVH+DD+  AHI   E  
Sbjct: 186 ITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHIYLFENP 245

Query: 241 RASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELGF 297
           +A GR ICSS       + +ML+  YP Y   ++    + +       + KL +LGF
Sbjct: 246 KAEGRYICSSHDCIILDLAKMLREKYPEYNIPTEFKGVDENLKSVCFSSKKLTDLGF 302

Vitis vinifera (taxid: 29760)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P14720|DFRA_PETHY Dihydroflavonol-4-reductase OS=Petunia hybrida GN=DFRA PE=2 SV=2

 Score =  199 bits (505), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 117/301 (38%), Positives = 169/301 (56%), Gaps = 7/301 (2%)

Query: 1   MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKAD 60
           +P  CVTG  GFI + LV  LL++G+ V  TVRDPE+  KV  L EL  A+  L + KAD
Sbjct: 15  VPTVCVTGAAGFIGSWLVMRLLERGYNVHATVRDPENKKKVKHLLELPKADTNLTLWKAD 74

Query: 61  LLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRV 120
           L +EGSFDEAIQG  GVFH A+P+      + +  +I P ++G L+++ SC KA +VKR+
Sbjct: 75  LTVEGSFDEAIQGCQGVFHVATPMDFE-SKDPENEVIKPTVRGMLSIIESCAKANTVKRL 133

Query: 121 VLTSSCSSIRYRHDAQQVSPLNESHWSDPD--YCKHYNLWYAYA-KTIAEKEAWRIAKDC 177
           V TSS  ++  +   QQ    +++ WSD D  Y K    W  +A K +AEK A   AK  
Sbjct: 134 VFTSSAGTLDVQE--QQKLFYDQTSWSDLDFIYAKKMTGWMYFASKILAEKAAMEEAKKK 191

Query: 178 GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG-FVHIDDVVGAHILA 236
            ID + + P  VVGP + P    +L+  L+++ G    Y     G +VH+DD+  AHI  
Sbjct: 192 NIDFISIIPPLVVGPFITPTFPPSLITALSLITGNEAHYCIIKQGQYVHLDDLCEAHIFL 251

Query: 237 MEETRASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELG 296
            E  +A GR ICSS  A    + +M++  +P Y   ++    + D    S  + KL ++G
Sbjct: 252 YEHPKADGRFICSSHHAIIYDVAKMVREKWPEYYVPTEFKGIDKDLPVVSFSSKKLTDMG 311

Query: 297 F 297
           F
Sbjct: 312 F 312

Petunia hybrida (taxid: 4102)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51103|DFRA_CALCH Dihydroflavonol-4-reductase OS=Callistephus chinensis GN=F PE=2 SV=1

 Score =  196 bits (497), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/300 (40%), Positives = 170/300 (56%), Gaps = 7/300 (2%)

Query: 2   PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADL 61
           P  CVTG  GFI + LV  LL++G++VR TVR+P D+ KV  L EL  AE  L + KADL
Sbjct: 7   PTVCVTGAAGFIGSWLVMRLLERGYIVRATVRNPGDMKKVKHLLELPKAETNLTLWKADL 66

Query: 62  LMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVV 121
             EGSFDEAI+G  GVFH A+P+      + +  +I P I+G L+++ SC KAK+VK++V
Sbjct: 67  TQEGSFDEAIEGCHGVFHVATPMDFE-SKDPENEIIKPTIEGILSIIRSCAKAKTVKKLV 125

Query: 122 LTSSCSSIRYRHDAQQVSPLNESHWSDPD--YCKHYNLW-YAYAKTIAEKEAWRIAKDCG 178
            TSS  ++  +    Q+   +ESHWSD D  Y K    W Y  +KT+AEK A   AK+  
Sbjct: 126 YTSSAGTVNVQE--TQLPVYDESHWSDLDFIYSKKMTAWMYFVSKTLAEKAAMEAAKENN 183

Query: 179 IDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG-FVHIDDVVGAHILAM 237
           ID V + P  VVGP + P    +L+  L+++ G    Y     G +VH+DD+   HI   
Sbjct: 184 IDFVSIIPPLVVGPFINPTFPPSLITALSLINGAESHYSIIKQGQYVHLDDLCECHIFLY 243

Query: 238 EETRASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELGF 297
           E   A GR ICS   A    +  M+K  +P Y   ++ +  + +    S  + KL ++GF
Sbjct: 244 ENPEAKGRYICSKQDATIHQLARMIKQKWPEYHVPTQFAGIDEELPTVSFSSKKLIDMGF 303

Callistephus chinensis (taxid: 13379)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|Q9S9N9|CCR1_ARATH Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1

 Score =  194 bits (492), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 120/302 (39%), Positives = 177/302 (58%), Gaps = 9/302 (2%)

Query: 5   CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
           CVTG  G+IA+ +VK LL++G+ V+ TVR+P+D  K   L EL G +ERL + KADL   
Sbjct: 14  CVTGAGGYIASWIVKILLERGYTVKGTVRNPDD-PKNTHLRELEGGKERLILCKADLQDY 72

Query: 65  GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
            +   AI G DGVFHTASPV    D+  Q  +++P + G   V+++  +AK VKRVV+TS
Sbjct: 73  EALKAAIDGCDGVFHTASPVT---DDPEQ--MVEPAVNGAKFVINAAAEAK-VKRVVITS 126

Query: 125 SCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVV 184
           S  ++    +    + ++ES WSD D+CK+   WY Y K +AE+ AW  AK+ G+D+VV+
Sbjct: 127 SIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVL 186

Query: 185 NPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRASG 244
           NP  V+GP L P   ++L  +L  + G    Y N T  +V + DV  AH+L  E   ASG
Sbjct: 187 NPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEAPSASG 246

Query: 245 RLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNS-PHSMDTSKLFELGFVGFKSV 303
           R + + S  H   ++E+L   +P YP  +KC  ++   + P+     K+ +LG   F S 
Sbjct: 247 RYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLGL-EFTST 305

Query: 304 PQ 305
            Q
Sbjct: 306 KQ 307

Involved in the latter stages of lignin biosynthesis. Catalyzes one of the last steps of monolignol biosynthesis, the conversion of cinnamoyl-CoAs into their corresponding cinnamaldehydes.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 4

EC: 4

>sp|Q9SAH9|CCR2_ARATH Cinnamoyl-CoA reductase 2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1

 Score =  193 bits (490), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 120/302 (39%), Positives = 175/302 (57%), Gaps = 9/302 (2%)

Query: 5   CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
           CVTG  G+IA+ +VK LL++G+ VR TVR+P D  K   L EL GA+ERL +  ADLL  
Sbjct: 9   CVTGAGGYIASWIVKLLLERGYTVRGTVRNPTD-PKNNHLRELQGAKERLTLHSADLLDY 67

Query: 65  GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
            +    I G DGVFHTASP+      +   T+++P + G   V+ +  KAK VKRVV TS
Sbjct: 68  EALCATIDGCDGVFHTASPM-----TDDPETMLEPAVNGAKFVIDAAAKAK-VKRVVFTS 121

Query: 125 SCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVV 184
           S  ++    +    + ++E+ WSD D+CK+   WY Y K +AE+ AW  AK  G+D+VV+
Sbjct: 122 SIGAVYMNPNRDTQAIVDENCWSDLDFCKNTKNWYCYGKMLAEQSAWETAKAKGVDLVVL 181

Query: 185 NPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRASG 244
           NP  V+GP L     ++L+ IL  + G    Y N T  +V + DV   H+L  E   ASG
Sbjct: 182 NPVLVLGPPLQSAINASLVHILKYLTGSAKTYANLTQVYVDVRDVALGHVLVYEAPSASG 241

Query: 245 RLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNS-PHSMDTSKLFELGFVGFKSV 303
           R I + +  H   ++E+L   +P YP  +KCS ++   + P+   T K+ +LG + FK +
Sbjct: 242 RYILAETALHRGEVVEILAKFFPEYPLPTKCSDEKNPRAKPYKFTTQKIKDLG-LEFKPI 300

Query: 304 PQ 305
            Q
Sbjct: 301 KQ 302

Cinnamoyl-CoA reductase probably involved in the formation of phenolic compounds associated with the hypersensitive response. Seems not to be involved in lignin biosynthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 4

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	305
255581655	320	cinnamoyl-CoA reductase, putative [Ricin	0.993	0.946	0.841	1e-152
239909311	320	cinnamoyl-CoA reductase [Jatropha curcas	1.0	0.953	0.816	1e-148
357488705	319	Dihydroflavonol-4-reductase [Medicago tr	0.996	0.952	0.793	1e-146
388519381	319	unknown [Medicago truncatula]	0.996	0.952	0.790	1e-145
388496146	319	unknown [Lotus japonicus]	0.996	0.952	0.8	1e-145
224101727	320	predicted protein [Populus trichocarpa]	1.0	0.953	0.803	1e-144
225423967	320	PREDICTED: bifunctional dihydroflavonol	1.0	0.953	0.786	1e-142
363807482	319	uncharacterized protein LOC100808002 [Gl	0.996	0.952	0.770	1e-140
356521074	319	PREDICTED: bifunctional dihydroflavonol	0.996	0.952	0.744	1e-139
449434624	320	PREDICTED: tetraketide alpha-pyrone redu	1.0	0.953	0.750	1e-137

>gi|255581655|ref|XP_002531631.1| cinnamoyl-CoA reductase, putative [Ricinus communis] gi|223528749|gb|EEF30759.1| cinnamoyl-CoA reductase, putative [Ricinus communis]

 Score =  542 bits (1396), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 255/303 (84%), Positives = 281/303 (92%)

Query: 1   MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKAD 60
           MPEYCVTGGTGFIAA+LVK+LLDKGH+VR TVRDPED  KVGFL E NGA+ERLKIMKAD
Sbjct: 1   MPEYCVTGGTGFIAAYLVKSLLDKGHIVRATVRDPEDDGKVGFLKEFNGAKERLKIMKAD 60

Query: 61  LLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRV 120
           L++EGSFDEAI GVDGVFHTASPVLVPYDNN+QATLIDPCIKGTLNVL+SC K+ SVKRV
Sbjct: 61  LMIEGSFDEAIHGVDGVFHTASPVLVPYDNNVQATLIDPCIKGTLNVLNSCTKSTSVKRV 120

Query: 121 VLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGID 180
           VLTSSCSSIRYR+D QQVSPLNESHWSDP+YCK YNLWYAYAKTI EKEAWR+A++ GID
Sbjct: 121 VLTSSCSSIRYRYDVQQVSPLNESHWSDPEYCKRYNLWYAYAKTIGEKEAWRVAEERGID 180

Query: 181 MVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEET 240
           +VVVNPSFVVGPLLAPQPTSTLLLILA+VKGLRGEYPNTTVGFVHIDDVV AH+LAME +
Sbjct: 181 LVVVNPSFVVGPLLAPQPTSTLLLILAIVKGLRGEYPNTTVGFVHIDDVVAAHVLAMENS 240

Query: 241 RASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELGFVGF 300
           RASGRL+CSSSVAHWS IIEMLK  YPSYP+E+KCS QEGD++PHSMDTSK+ +LGF   
Sbjct: 241 RASGRLVCSSSVAHWSEIIEMLKVKYPSYPHENKCSSQEGDSNPHSMDTSKIAQLGFPPL 300

Query: 301 KSV 303
           K+V
Sbjct: 301 KTV 303

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|239909311|gb|ACS32301.1| cinnamoyl-CoA reductase [Jatropha curcas]

 Score =  531 bits (1367), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 249/305 (81%), Positives = 277/305 (90%)

Query: 1   MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKAD 60
           MPEYCVTGGTGFIAA+L+K+LLDKGH VR TVRDP D  KVGFL E NGA+ERLKI+KAD
Sbjct: 1   MPEYCVTGGTGFIAAYLIKSLLDKGHTVRATVRDPGDSEKVGFLREFNGAKERLKILKAD 60

Query: 61  LLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRV 120
           LL+EGSFDEAIQGVDGVFHTASPV+V YD+N+QATLIDPCIKGTLNVLSSC KA SVKRV
Sbjct: 61  LLVEGSFDEAIQGVDGVFHTASPVIVSYDDNVQATLIDPCIKGTLNVLSSCTKATSVKRV 120

Query: 121 VLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGID 180
           VLTSSCSSIRYR+D QQV PLNESHWSD DYCK YNLWYAYAKTI E EAWRIAK+ GID
Sbjct: 121 VLTSSCSSIRYRYDVQQVCPLNESHWSDTDYCKRYNLWYAYAKTIGETEAWRIAKESGID 180

Query: 181 MVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEET 240
           +VVVNPSFVVGPLLAPQPTSTL LIL++VKG  G+YPNTTVGFVHIDDV+ AHILAME++
Sbjct: 181 LVVVNPSFVVGPLLAPQPTSTLHLILSIVKGSLGQYPNTTVGFVHIDDVIAAHILAMEDS 240

Query: 241 RASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELGFVGF 300
           RASGRL+CSSSVAHWS IIEML+A YPSYPYE+KCS QEGDN+PHSMDT+K+ +LGF  F
Sbjct: 241 RASGRLVCSSSVAHWSEIIEMLRAKYPSYPYENKCSSQEGDNNPHSMDTTKITQLGFPPF 300

Query: 301 KSVPQ 305
           +++ Q
Sbjct: 301 RTLEQ 305

Source: Jatropha curcas

Species: Jatropha curcas

Genus: Jatropha

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357488705|ref|XP_003614640.1| Dihydroflavonol-4-reductase [Medicago truncatula] gi|355515975|gb|AES97598.1| Dihydroflavonol-4-reductase [Medicago truncatula]

 Score =  523 bits (1346), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 242/305 (79%), Positives = 281/305 (92%), Gaps = 1/305 (0%)

Query: 1   MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKAD 60
           MPE+CVTGGTGFIAA+LVKALL+KGH+VRTTVR+P+DL KVG+L +L+G +ERLKI+KAD
Sbjct: 1   MPEFCVTGGTGFIAAYLVKALLEKGHIVRTTVRNPDDLEKVGYLTQLSGDKERLKILKAD 60

Query: 61  LLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRV 120
           L++EGSFDEA+ GVDGVFHTASPV+VPYDNNIQATLIDPCIKGT NVL+SC KA +VKRV
Sbjct: 61  LMVEGSFDEAVTGVDGVFHTASPVIVPYDNNIQATLIDPCIKGTQNVLNSCIKA-NVKRV 119

Query: 121 VLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGID 180
           VLTSSCSSIRYR D QQVSPLNESHWSDP+YCK YNLWYAYAKT+ E+EAWRIA++ G+D
Sbjct: 120 VLTSSCSSIRYRDDVQQVSPLNESHWSDPEYCKRYNLWYAYAKTLGEREAWRIAEESGLD 179

Query: 181 MVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEET 240
           +VVVNPSFVVGPLLAPQP STLL+IL++VKG RGEYPNTTVGFVHIDDV+ AHILAMEE 
Sbjct: 180 LVVVNPSFVVGPLLAPQPASTLLMILSIVKGSRGEYPNTTVGFVHIDDVIAAHILAMEEP 239

Query: 241 RASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELGFVGF 300
           +ASGRL+CSS+VAHWS II+ML+A YPSYPYE+KCS QEGDN+ HSMDT+K+ +LGF  F
Sbjct: 240 KASGRLVCSSTVAHWSQIIQMLQAKYPSYPYETKCSSQEGDNNTHSMDTTKITQLGFSQF 299

Query: 301 KSVPQ 305
           KS+ Q
Sbjct: 300 KSLEQ 304

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388519381|gb|AFK47752.1| unknown [Medicago truncatula]

 Score =  520 bits (1340), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 241/305 (79%), Positives = 280/305 (91%), Gaps = 1/305 (0%)

Query: 1   MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKAD 60
           MPE+CVTGGTGFIAA+LVKALL+KGH+VRTTVR+P+DL KVG+L +L+G +ERLKI+KAD
Sbjct: 1   MPEFCVTGGTGFIAAYLVKALLEKGHIVRTTVRNPDDLEKVGYLTQLSGDKERLKILKAD 60

Query: 61  LLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRV 120
           L++EGSFDEA+ GVDGVFHTASPV+VPYDNNIQATLIDPCI GT NVL+SC KA +VKRV
Sbjct: 61  LMVEGSFDEAVTGVDGVFHTASPVIVPYDNNIQATLIDPCINGTQNVLNSCIKA-NVKRV 119

Query: 121 VLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGID 180
           VLTSSCSSIRYR D QQVSPLNESHWSDP+YCK YNLWYAYAKT+ E+EAWRIA++ G+D
Sbjct: 120 VLTSSCSSIRYRDDVQQVSPLNESHWSDPEYCKRYNLWYAYAKTLGEREAWRIAEESGLD 179

Query: 181 MVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEET 240
           +VVVNPSFVVGPLLAPQP STLL+IL++VKG RGEYPNTTVGFVHIDDV+ AHILAMEE 
Sbjct: 180 LVVVNPSFVVGPLLAPQPASTLLMILSIVKGSRGEYPNTTVGFVHIDDVIAAHILAMEEP 239

Query: 241 RASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELGFVGF 300
           +ASGRL+CSS+VAHWS II+ML+A YPSYPYE+KCS QEGDN+ HSMDT+K+ +LGF  F
Sbjct: 240 KASGRLVCSSTVAHWSQIIQMLQAKYPSYPYETKCSSQEGDNNTHSMDTTKITQLGFSQF 299

Query: 301 KSVPQ 305
           KS+ Q
Sbjct: 300 KSLEQ 304

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388496146|gb|AFK36139.1| unknown [Lotus japonicus]

 Score =  518 bits (1335), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 244/305 (80%), Positives = 278/305 (91%), Gaps = 1/305 (0%)

Query: 1   MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKAD 60
           MPE+CVTGGTGFIAA+LV+ALL+KGH VRTTVR+P D+ KVGFL EL+GA+ERLKI+KAD
Sbjct: 1   MPEFCVTGGTGFIAAYLVQALLEKGHTVRTTVRNPGDVEKVGFLMELSGAKERLKILKAD 60

Query: 61  LLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRV 120
           LL EGSFDEA+ GVDGVFHTASPVLVPYD+NIQATLIDPCIKG LNVL+SC KA +VKRV
Sbjct: 61  LLNEGSFDEAVSGVDGVFHTASPVLVPYDDNIQATLIDPCIKGALNVLNSCVKA-NVKRV 119

Query: 121 VLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGID 180
           VLTSSCSSIRYR D QQVSPLNESHWSDP+YCK YNLWYAYAKT+AEKEAW+IAK+ G+D
Sbjct: 120 VLTSSCSSIRYRDDEQQVSPLNESHWSDPEYCKRYNLWYAYAKTLAEKEAWKIAKESGMD 179

Query: 181 MVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEET 240
           +VVVNPSFVVGPLLAPQPTSTLL+IL+++KGL+GEYPNTTVGFVHI DVVGAH+LAMEE 
Sbjct: 180 LVVVNPSFVVGPLLAPQPTSTLLVILSIIKGLKGEYPNTTVGFVHIHDVVGAHLLAMEEP 239

Query: 241 RASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELGFVGF 300
           +ASGRL+CSS+VAHWS IIEML++ YP YPYE KC  QEGDN+ HSMDT+K+  LGF  F
Sbjct: 240 KASGRLVCSSTVAHWSQIIEMLQSQYPFYPYEKKCGGQEGDNNTHSMDTTKITALGFPAF 299

Query: 301 KSVPQ 305
           KS+ Q
Sbjct: 300 KSLEQ 304

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224101727|ref|XP_002312396.1| predicted protein [Populus trichocarpa] gi|222852216|gb|EEE89763.1| predicted protein [Populus trichocarpa]

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 245/305 (80%), Positives = 274/305 (89%)

Query: 1   MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKAD 60
           MPEYCVTGGTGFIAA+LVK+LL+KGH VRTTVRDP D+ KVG L E +GA+ERLKI KAD
Sbjct: 1   MPEYCVTGGTGFIAAYLVKSLLEKGHRVRTTVRDPGDVGKVGLLREFDGAKERLKIFKAD 60

Query: 61  LLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRV 120
           LL EGSFDEAIQGVDGVFHTASPVL+P+D+NIQA LIDPCI GTLNVL+SC KA +VKRV
Sbjct: 61  LLEEGSFDEAIQGVDGVFHTASPVLLPHDDNIQAMLIDPCINGTLNVLNSCSKANTVKRV 120

Query: 121 VLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGID 180
           VLTSSCSSIRYR D QQVSPLNESHWSDP+YCK Y+LWYAYAKTI EKEAWR AK+ GID
Sbjct: 121 VLTSSCSSIRYRDDVQQVSPLNESHWSDPEYCKRYDLWYAYAKTIGEKEAWRSAKENGID 180

Query: 181 MVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEET 240
           +VVVNPSFVVGPLLAPQPTSTLLLILA+VKGLRGEYPN T+GFVHIDDVV AHILAME+ 
Sbjct: 181 LVVVNPSFVVGPLLAPQPTSTLLLILAIVKGLRGEYPNMTIGFVHIDDVVAAHILAMEDK 240

Query: 241 RASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELGFVGF 300
           +ASGRL+CS SVAHWS IIEML+A YPSYPYE+KCS Q+GD +PHSMDT+K+  LGF  F
Sbjct: 241 KASGRLVCSGSVAHWSEIIEMLRAKYPSYPYENKCSSQKGDCNPHSMDTTKIATLGFPPF 300

Query: 301 KSVPQ 305
           K++ +
Sbjct: 301 KTLEE 305

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225423967|ref|XP_002282497.1| PREDICTED: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase isoform 1 [Vitis vinifera] gi|297737823|emb|CBI27024.3| unnamed protein product [Vitis vinifera]

 Score =  511 bits (1316), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 240/305 (78%), Positives = 272/305 (89%)

Query: 1   MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKAD 60
           M  +CVTGGTGFIAA+LVK LL+ GH VRTTVRDP D+ KVGFLWEL+GA+ERLKIMKAD
Sbjct: 1   MANFCVTGGTGFIAAYLVKRLLEDGHFVRTTVRDPGDVEKVGFLWELSGAKERLKIMKAD 60

Query: 61  LLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRV 120
           L++E SFDEA+QGVDGVFHTASPVLVPYD NI+ATLIDPCI GTLNVL SC K+ S+KRV
Sbjct: 61  LMVEESFDEAVQGVDGVFHTASPVLVPYDENIKATLIDPCINGTLNVLRSCSKSSSLKRV 120

Query: 121 VLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGID 180
           VLTSSCSSIRYR D QQVSPLNESHWSDP+YCK YNLWYAYAKT AEKEAW++AK+ GID
Sbjct: 121 VLTSSCSSIRYRDDVQQVSPLNESHWSDPEYCKRYNLWYAYAKTEAEKEAWKLAKENGID 180

Query: 181 MVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEET 240
           +V VNPSFVVGPLLA QPTSTL +IL++VKGL GEYPNTTVGFVHIDDV+ AHILAMEE+
Sbjct: 181 LVAVNPSFVVGPLLAWQPTSTLHMILSVVKGLCGEYPNTTVGFVHIDDVIAAHILAMEES 240

Query: 241 RASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELGFVGF 300
           +ASGRL+CSSSVAHWS II+ML+A YP+YP+ESKCS  EGDN PHSMDTSK+ +LG   F
Sbjct: 241 KASGRLVCSSSVAHWSQIIDMLRAKYPAYPFESKCSSSEGDNHPHSMDTSKIIQLGLPPF 300

Query: 301 KSVPQ 305
           K++ Q
Sbjct: 301 KTLAQ 305

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807482|ref|NP_001242138.1| uncharacterized protein LOC100808002 [Glycine max] gi|255641595|gb|ACU21070.1| unknown [Glycine max]

 Score =  503 bits (1294), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 235/305 (77%), Positives = 276/305 (90%), Gaps = 1/305 (0%)

Query: 1   MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKAD 60
           MPE+CVTGGTGFIA++LVKALL+KGH VRTTVR+P D+ KVGFL EL+GA+ERLKI+KAD
Sbjct: 1   MPEFCVTGGTGFIASYLVKALLEKGHTVRTTVRNPGDVEKVGFLTELSGAKERLKILKAD 60

Query: 61  LLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRV 120
           LL+EGSFDEA++GVDGVFH ASPVL+PYD N+Q  LIDPCIKGTLNVL+SC KA +VK  
Sbjct: 61  LLVEGSFDEAVRGVDGVFHMASPVLIPYDENVQQNLIDPCIKGTLNVLNSCVKA-TVKHF 119

Query: 121 VLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGID 180
           VLTSSCSSIRYR D Q+V PLNESHW+D +YCK Y LWYAYAKTIAE+EAWRIAK+ G+D
Sbjct: 120 VLTSSCSSIRYRDDVQEVCPLNESHWTDLEYCKRYKLWYAYAKTIAEREAWRIAKENGMD 179

Query: 181 MVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEET 240
           +VVVNPSFVVGPLLAPQPTSTLLLIL++VKG++GEYPNTTVGFVHI+DVV AH+LAME+ 
Sbjct: 180 LVVVNPSFVVGPLLAPQPTSTLLLILSIVKGVKGEYPNTTVGFVHINDVVAAHLLAMEDP 239

Query: 241 RASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELGFVGF 300
           +ASGRLICSS+VAHWS IIEML+A YPSYPYE++CS QEGDN+PHSM T+K+ +LGF  F
Sbjct: 240 KASGRLICSSTVAHWSQIIEMLRAKYPSYPYENECSSQEGDNNPHSMGTTKITQLGFPPF 299

Query: 301 KSVPQ 305
           K++ Q
Sbjct: 300 KTLEQ 304

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356521074|ref|XP_003529183.1| PREDICTED: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase-like isoform 1 [Glycine max]

 Score =  499 bits (1284), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 227/305 (74%), Positives = 276/305 (90%), Gaps = 1/305 (0%)

Query: 1   MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKAD 60
           MPE+CVTGGTGFI ++LVKALL+KGH VRTTVR+PED+ KVGFL EL+GA+ERL+I+KA+
Sbjct: 1   MPEFCVTGGTGFIGSYLVKALLEKGHTVRTTVRNPEDVEKVGFLTELSGAKERLRILKAE 60

Query: 61  LLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRV 120
           LL+EGSFDE ++GVDGVFHTASPVLVPYD N+Q  LIDPC+KGT+NVL+SC KA +VKRV
Sbjct: 61  LLVEGSFDEVVKGVDGVFHTASPVLVPYDENVQENLIDPCLKGTINVLNSCIKA-NVKRV 119

Query: 121 VLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGID 180
           VLTSSCSSIRYR D QQV PLNESHW+D +YC+ +NLWYAYAKTIAE+EAWRIAK+ G+D
Sbjct: 120 VLTSSCSSIRYRDDVQQVCPLNESHWTDLEYCRRHNLWYAYAKTIAEREAWRIAKENGMD 179

Query: 181 MVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEET 240
           +VVVNPSFVVGP+LAPQPTSTLLLIL++VKG++GEYPNT VGFVHI+DV+  H+LAME+ 
Sbjct: 180 LVVVNPSFVVGPMLAPQPTSTLLLILSIVKGMKGEYPNTAVGFVHINDVIATHLLAMEDP 239

Query: 241 RASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELGFVGF 300
           + SGRLICSS+VAHWS IIEML+A YPSYPYE++CS QEGDN+PH+MD +K+ +LGF  F
Sbjct: 240 KTSGRLICSSTVAHWSQIIEMLRAKYPSYPYENRCSSQEGDNNPHNMDITKISQLGFPPF 299

Query: 301 KSVPQ 305
           +++ Q
Sbjct: 300 RTLEQ 304

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449434624|ref|XP_004135096.1| PREDICTED: tetraketide alpha-pyrone reductase 2-like [Cucumis sativus]

 Score =  494 bits (1271), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 229/305 (75%), Positives = 269/305 (88%)

Query: 1   MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKAD 60
           MPEYCVTGGTGFIA++LVK LL+ GH VRTTVR+P D  +VGFLWE NGA+ERLKI+KAD
Sbjct: 1   MPEYCVTGGTGFIASYLVKTLLENGHHVRTTVRNPGDYGRVGFLWEFNGAKERLKIVKAD 60

Query: 61  LLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRV 120
           LL EGSFDEAI+GVDGVFHTASPVLVPYDNNI+ TLIDP I GT+NVL+SC KA SVKRV
Sbjct: 61  LLEEGSFDEAIEGVDGVFHTASPVLVPYDNNIKTTLIDPSINGTVNVLNSCLKANSVKRV 120

Query: 121 VLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGID 180
           VLTSSCS+IRYR+D QQ+  LNESHW+DPDYCK YNLWYA+AKT+AEKEAWR+A + GID
Sbjct: 121 VLTSSCSAIRYRYDVQQLCLLNESHWTDPDYCKRYNLWYAFAKTLAEKEAWRMAGEHGID 180

Query: 181 MVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEET 240
           +VVVNPSFVVGPLL P+PTST  L+L ++KG RGEYPN T+GFVH+DDVV AHILAME  
Sbjct: 181 LVVVNPSFVVGPLLTPKPTSTQHLVLTIMKGERGEYPNCTLGFVHVDDVVAAHILAMENP 240

Query: 241 RASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELGFVGF 300
           +ASGR+ICSS+VAHWS II+ L++ YPSYP+ESKCS Q+G+ +PH+MDTSK+ ELGF GF
Sbjct: 241 KASGRIICSSTVAHWSQIIDTLRSKYPSYPFESKCSFQQGECNPHNMDTSKISELGFPGF 300

Query: 301 KSVPQ 305
           K++ Q
Sbjct: 301 KTMEQ 305

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	305
TAIR|locus:2201272	321	TKPR2 "tetraketide alpha-pyron	1.0	0.950	0.728	2.1e-125
TAIR|locus:2031255	320	AT1G25460 [Arabidopsis thalian	0.996	0.95	0.640	7.2e-107
TAIR|locus:2122093	326	DRL1 "dihydroflavonol 4-reduct	0.973	0.911	0.476	1.3e-68
TAIR|locus:2033904	325	AT1G51410 [Arabidopsis thalian	0.947	0.889	0.442	2e-63
TAIR|locus:2150315	326	AT5G19440 [Arabidopsis thalian	0.950	0.889	0.440	6.2e-62
TAIR|locus:2012315	322	AT1G09510 [Arabidopsis thalian	0.891	0.844	0.462	9.3e-59
TAIR|locus:2012250	369	AT1G09480 [Arabidopsis thalian	0.855	0.707	0.454	8.6e-56
TAIR|locus:2012265	322	AT1G09490 [Arabidopsis thalian	0.970	0.919	0.425	1.4e-55
TAIR|locus:2200427	344	CCR1 "cinnamoyl coa reductase	0.960	0.851	0.397	4.9e-53
TAIR|locus:2025832	332	CCR2 "cinnamoyl coa reductase"	0.960	0.882	0.400	1.7e-52

TAIR|locus:2201272 TKPR2 "tetraketide alpha-pyrone reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1232 (438.7 bits), Expect = 2.1e-125, P = 2.1e-125
 Identities = 223/306 (72%), Positives = 268/306 (87%)

Query:     1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKAD 60
             M EY VTGGTGFIA++++K+LL+ GH VRTTVR+P D  KVGFLWE  GA++RLKI++AD
Sbjct:     1 MSEYLVTGGTGFIASYIIKSLLELGHTVRTTVRNPRDEEKVGFLWEFQGAKQRLKILQAD 60

Query:    61 LLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKS-VKR 119
             L +EGSFDEA+ GVDGVFHTASPVLVP D+NIQ TL+DP IKGT NV+SSC K+K+ +KR
Sbjct:    61 LTVEGSFDEAVNGVDGVFHTASPVLVPQDHNIQETLVDPIIKGTTNVMSSCAKSKATLKR 120

Query:   120 VVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGI 179
             +VLTSSCSSIRYR DA + SPLNESHWSDP+YCK +NLWY YAKT+ E+EAWRIA++ G+
Sbjct:   121 IVLTSSCSSIRYRFDATEASPLNESHWSDPEYCKRFNLWYGYAKTLGEREAWRIAEEKGL 180

Query:   180 DMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEE 239
             D+VVVNPSFVVGPLL P+PTSTLL+ILA+ KGL GEYPN TVGFVHIDDVV AH+LAMEE
Sbjct:   181 DLVVVNPSFVVGPLLGPKPTSTLLMILAIAKGLAGEYPNFTVGFVHIDDVVAAHVLAMEE 240

Query:   240 TRASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELGFVG 299
              +ASGR+ICSSSVAHWS IIE+++  YP+YP+E+KCS +EGDNSPHSMDT K+ ELGF  
Sbjct:   241 PKASGRIICSSSVAHWSEIIELMRNKYPNYPFENKCSNKEGDNSPHSMDTRKIHELGFGS 300

Query:   300 FKSVPQ 305
             FKS+P+
Sbjct:   301 FKSLPE 306

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0010584 "pollen exine formation" evidence=IMP

GO:0080110 "sporopollenin biosynthetic process" evidence=IMP

TAIR|locus:2031255 AT1G25460 [Arabidopsis thaliana (taxid:3702)]

 Score = 1057 (377.1 bits), Expect = 7.2e-107, P = 7.2e-107
 Identities = 196/306 (64%), Positives = 245/306 (80%)

Query:     1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKAD 60
             M EY VTGGT FIA+H++K+LL+ GH VRTTVRD ED  KVGFLW+L GA+ERLKI +AD
Sbjct:     1 MAEYLVTGGTSFIASHVIKSLLEFGHYVRTTVRDSEDEEKVGFLWDLKGAKERLKIFEAD 60

Query:    61 LLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKS-VKR 119
             L +EGSFDEA+ GVDGVFH AS V V  DNN      DP I GT+NV++SC K+++ VKR
Sbjct:    61 LTIEGSFDEAVNGVDGVFHIASRVSVRLDNN-NLDKFDPNISGTMNVMNSCAKSRNTVKR 119

Query:   120 VVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGI 179
             +VLTSS ++IRYR DA QVSPLNESHW+D +YCKH+ +WYAY KT+ EKEAWRIA D  +
Sbjct:   120 IVLTSSSTAIRYRFDATQVSPLNESHWTDLEYCKHFKIWYAYKKTLGEKEAWRIAADKKL 179

Query:   180 DMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEE 239
             ++VVV PSF +GP+L+P+PTS+ L+ L+++KG RG YPN   GFVHIDDVV A ILAMEE
Sbjct:   180 NLVVVIPSFCIGPILSPKPTSSPLIFLSIIKGTRGTYPNFRGGFVHIDDVVAAQILAMEE 239

Query:   240 TRASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELGFVG 299
              +ASGR++CSSSVAHWS IIEML+  YP YP+E+KC  +EG + PHS+DT+K+ ELGF  
Sbjct:   240 PKASGRILCSSSVAHWSEIIEMLRIKYPLYPFETKCGSEEGKDMPHSLDTTKIHELGFAS 299

Query:   300 FKSVPQ 305
             FKS+ +
Sbjct:   300 FKSLTE 305

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0016491 "oxidoreductase activity" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

TAIR|locus:2122093 DRL1 "dihydroflavonol 4-reductase-like1" [Arabidopsis thaliana (taxid:3702)]

 Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
 Identities = 144/302 (47%), Positives = 199/302 (65%)

Query:     5 CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
             CVTG +GF+A+ LVK LL +G+ V  TVRDP +  K+  LW+L GA+ERL+++KADL+ E
Sbjct:     9 CVTGASGFLASWLVKRLLLEGYEVIGTVRDPGNEKKLAHLWKLEGAKERLRLVKADLMEE 68

Query:    65 GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
             GSFD AI G  GVFHTASPVL P  +N +  ++ P I+GTLNVL SC+K  S+KRVVLTS
Sbjct:    69 GSFDNAIMGCQGVFHTASPVLKP-TSNPEEEILRPAIEGTLNVLRSCRKNPSLKRVVLTS 127

Query:   125 SCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVV 184
             S S++R R D     PL+ES W+  + CK + +WYA +KT+AE+ AW+ +++ GID+V V
Sbjct:   128 SSSTVRIRDDFDPKIPLDESIWTSVELCKRFQVWYALSKTLAEQAAWKFSEENGIDLVTV 187

Query:   185 NPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYP-NTTVGFVHIDDVVGAHILAMEETRAS 243
              PSF+VGP L P   ST   +L ++KG   ++  +  +G+VHIDDV   HI+  E   A 
Sbjct:   188 LPSFLVGPSLPPDLCSTASDVLGLLKGETEKFQWHGQMGYVHIDDVARTHIVVFEHEAAQ 247

Query:   244 GRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELGFVGFKSV 303
             GR ICSS+V     ++  L A YPS P   +  K   +   +  DTSK+  LG + FKS+
Sbjct:   248 GRYICSSNVISLEELVSFLSARYPSLPIPKRFEKL--NRLHYDFDTSKIQSLG-LKFKSL 304

Query:   304 PQ 305
              +
Sbjct:   305 EE 306

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0009555 "pollen development" evidence=IMP

GO:0048316 "seed development" evidence=IMP

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0010584 "pollen exine formation" evidence=IMP

GO:0080110 "sporopollenin biosynthetic process" evidence=IMP

TAIR|locus:2033904 AT1G51410 [Arabidopsis thaliana (taxid:3702)]

 Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
 Identities = 130/294 (44%), Positives = 185/294 (62%)

Query:     5 CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
             CVTG +G+IA+ +VK LL +G+ V+ +VRDP D  K   L  L GAEERLK+ KA+LL E
Sbjct:    10 CVTGASGYIASWIVKLLLLRGYTVKASVRDPNDPRKTEHLLALEGAEERLKLFKANLLEE 69

Query:    65 GSFDEAIQGVDGVFHTASPVLVPYD-NNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLT 123
             GSFD AI G +GVFHTASP    +D  + QA L+DP +KGT+NVLSSC K  SVKRVVLT
Sbjct:    70 GSFDSAIDGCEGVFHTASPFY--HDVKDPQAELLDPAVKGTINVLSSCLKTSSVKRVVLT 127

Query:   124 SSCSSIRYRHDAQQVSPLNESHW-SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMV 182
             SS +++ +    +    + +  W +DPDYC+   LWY  +KT+AE  AW+ AK+  + +V
Sbjct:   128 SSIAAVAFNGMPRTPETIVDETWFADPDYCRASKLWYVLSKTLAENAAWKFAKENNLQLV 187

Query:   183 VVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRA 242
              +NP+ V+GPLL P   ++   +L+++KG +  +PN T G+V++ DV  AHI A E   A
Sbjct:   188 SINPAMVIGPLLQPTLNTSAAAVLSLIKGAQ-TFPNATFGWVNVKDVANAHIQAFENPDA 246

Query:   243 SGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELG 296
              GR      VAH+S ++ +L   YP +    KC+ ++     + +   K   LG
Sbjct:   247 DGRYCLVERVAHYSEVVNILHDLYPDFQLPEKCADEKIYIPTYKVSKEKAESLG 300

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

GO:0048610 "cellular process involved in reproduction" evidence=RCA

GO:0048868 "pollen tube development" evidence=RCA

TAIR|locus:2150315 AT5G19440 [Arabidopsis thaliana (taxid:3702)]

 Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
 Identities = 129/293 (44%), Positives = 183/293 (62%)

Query:     5 CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
             CVTG +G+IA+ LVK LL +G+ V+ +VRDP D  K   L  L GA+ERL + KADLL +
Sbjct:    11 CVTGASGYIASWLVKFLLSRGYTVKASVRDPSDPKKTQHLVSLEGAKERLHLFKADLLEQ 70

Query:    65 GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
             GSFD AI G  GVFHTASP      +  QA LIDP +KGTLNVL+SC KA SVKRVV+TS
Sbjct:    71 GSFDSAIDGCHGVFHTASPFFNDAKDP-QAELIDPAVKGTLNVLNSCAKASSVKRVVVTS 129

Query:   125 SCSSIRYRHDAQQVS-PLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVV 183
             S +++ Y    +     ++E+ +SDP+ C+   +WY  +KT+AE  AW++AK+ G+D+V 
Sbjct:   130 SMAAVGYNGKPRTPDVTVDETWFSDPELCEASKMWYVLSKTLAEDAAWKLAKEKGLDIVT 189

Query:   184 VNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRAS 243
             +NP+ V+GPLL P   ++   IL ++ G +  +PN + G+V++ DV  AHI A E   A+
Sbjct:   190 INPAMVIGPLLQPTLNTSAAAILNLINGAK-TFPNLSFGWVNVKDVANAHIQAFEVPSAN 248

Query:   244 GRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELG 296
             GR      V H S I+ +L+  YP+ P   +C  +      + +   K   LG
Sbjct:   249 GRYCLVERVVHHSEIVNILRELYPNLPLPERCVDENPYVPTYQVSKDKTRSLG 301

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA

TAIR|locus:2012315 AT1G09510 [Arabidopsis thaliana (taxid:3702)]

 Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
 Identities = 128/277 (46%), Positives = 179/277 (64%)

Query:     5 CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
             CVTG +G++A+ +VK LL +G+ VR TVRDP D  K   L  L+GA+E+LK+ KADLL E
Sbjct:     9 CVTGASGYVASWIVKLLLLRGYTVRATVRDPSDEKKTEHLLALDGAKEKLKLFKADLLEE 68

Query:    65 GSFDEAIQGVDGVFHTASPV-LVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLT 123
             GSF++AI+G D VFHTASPV L   D  I+  LIDP +KGTLNVL +C K  SVKRV++T
Sbjct:    69 GSFEQAIEGCDAVFHTASPVSLTVTDPQIE--LIDPAVKGTLNVLKTCAKVSSVKRVIVT 126

Query:   124 SSCSSIRYRHDAQQVSPL-NESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMV 182
             SS +++ +R      + L +ES +SDP++C    LWYA +KT+AE EAWR AK+ G+D+V
Sbjct:   127 SSMAAVLFREPTLGPNDLVDESCFSDPNFCTEKKLWYALSKTLAEDEAWRFAKEKGLDLV 186

Query:   183 VVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRA 242
             V+NP  V+GPLL P  T ++ +I+ ++ G +  + N     V + DV  AHI A E   A
Sbjct:   187 VINPGLVLGPLLKPSLTFSVNVIVELITG-KDNFINKDFRLVDVRDVALAHIKAFETPSA 245

Query:   243 SGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQE 279
             +GR I    V   + I ++L+  +P     +K    E
Sbjct:   246 NGRYIIEGPVVTINDIEKILREFFPDLNLGNKGEASE 282

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=ISS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

TAIR|locus:2012250 AT1G09480 [Arabidopsis thaliana (taxid:3702)]

 Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
 Identities = 120/264 (45%), Positives = 169/264 (64%)

Query:     5 CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
             CVTG +G+IA+ +VK LL +G+ V+ TVRD  D  K   L  L+GA+ERLK+ KADLL E
Sbjct:    56 CVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEE 115

Query:    65 GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
              SF++AI+G D VFHTASPV     +  Q  LIDP +KGT+NVL++CK+  SV+RV+LTS
Sbjct:   116 SSFEQAIEGCDAVFHTASPVFFTVKDP-QTELIDPALKGTMNVLNTCKETPSVRRVILTS 174

Query:   125 SCSSIRYRHDAQQVSPL-NESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVV 183
             S +++ +R    + S + +E+ +SDP  C+    WY  +K +AE  AW  AKD GIDMVV
Sbjct:   175 STAAVLFRQPPVEASDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDNGIDMVV 234

Query:   184 VNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRAS 243
             +NP F+ GPLL P    ++ LI+  + G +  + +    FV + DV  AHI A+E   A+
Sbjct:   235 LNPGFIFGPLLQPTLNFSVELIVDFING-KNPFNSRFYRFVDVRDVALAHIKALETPSAN 293

Query:   244 GRLICSSSVAHWSPIIEMLKATYP 267
             GR I    +   S II++L+   P
Sbjct:   294 GRYIIDGPIMSVSDIIDILRELLP 317

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=ISS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

TAIR|locus:2012265 AT1G09490 [Arabidopsis thaliana (taxid:3702)]

 Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
 Identities = 128/301 (42%), Positives = 178/301 (59%)

Query:     5 CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
             CVTG +G+IA+ +VK LL +G+ V  TVRDP+D  K   L  L+GA+ERLK+ KADLL E
Sbjct:     9 CVTGASGYIASWIVKLLLLRGYTVNATVRDPKDKKKTEHLLALDGAKERLKLFKADLLEE 68

Query:    65 GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
              SFD+AI G D VFHTASPVL    +  Q  LIDP +KGT+NVL++CK+  SVKRV+LTS
Sbjct:    69 SSFDQAIDGCDAVFHTASPVLFTVTDP-QTELIDPALKGTINVLNTCKQVSSVKRVILTS 127

Query:   125 SCSSIRYRHDAQQVSPL-NESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVV 183
             S +++  R      + L +E+ +SDP  C+    WY+ +K +AE  AW+ AKD GIDMVV
Sbjct:   128 STAAVLSRQPPIGPNDLVDETFFSDPSLCRETKNWYSLSKILAENAAWQFAKDNGIDMVV 187

Query:   184 VNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRAS 243
             +NP F+ GPLL P    ++ LI+  + G +  +      F  + DV   HI A+E   A+
Sbjct:   188 LNPGFICGPLLQPTLNMSVELIVDFING-KNPFNKRYYRFSDVRDVALVHIKALETPSAN 246

Query:   244 GRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELG--FVGFK 301
             GR I        + II++L+  +P         + E +     +   K+  LG  F   K
Sbjct:   247 GRYIIDGPNMSVNDIIDILRKLFPDLSIADTNEESEMNEMICQVCVEKVKNLGVEFTPMK 306

Query:   302 S 302
             S
Sbjct:   307 S 307

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=ISS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

TAIR|locus:2200427 CCR1 "cinnamoyl coa reductase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
 Identities = 120/302 (39%), Positives = 178/302 (58%)

Query:     5 CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
             CVTG  G+IA+ +VK LL++G+ V+ TVR+P+D  K   L EL G +ERL + KADL   
Sbjct:    14 CVTGAGGYIASWIVKILLERGYTVKGTVRNPDD-PKNTHLRELEGGKERLILCKADLQDY 72

Query:    65 GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
              +   AI G DGVFHTASPV    D+  Q  +++P + G   V+++  +AK VKRVV+TS
Sbjct:    73 EALKAAIDGCDGVFHTASPVT---DDPEQ--MVEPAVNGAKFVINAAAEAK-VKRVVITS 126

Query:   125 SCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVV 184
             S  ++    +    + ++ES WSD D+CK+   WY Y K +AE+ AW  AK+ G+D+VV+
Sbjct:   127 SIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVL 186

Query:   185 NPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRASG 244
             NP  V+GP L P   ++L  +L  + G    Y N T  +V + DV  AH+L  E   ASG
Sbjct:   187 NPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEAPSASG 246

Query:   245 RLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNS-PHSMDTSKLFELGFVGFKSV 303
             R + + S  H   ++E+L   +P YP  +KC  ++   + P+     K+ +LG + F S 
Sbjct:   247 RYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLG-LEFTST 305

Query:   304 PQ 305
              Q
Sbjct:   306 KQ 307

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0050662 "coenzyme binding" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=IDA

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006623 "protein targeting to vacuole" evidence=RCA

GO:0007623 "circadian rhythm" evidence=IEP

GO:0009409 "response to cold" evidence=IEP

TAIR|locus:2025832 CCR2 "cinnamoyl coa reductase" [Arabidopsis thaliana (taxid:3702)]

 Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
 Identities = 121/302 (40%), Positives = 176/302 (58%)

Query:     5 CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
             CVTG  G+IA+ +VK LL++G+ VR TVR+P D  K   L EL GA+ERL +  ADLL  
Sbjct:     9 CVTGAGGYIASWIVKLLLERGYTVRGTVRNPTD-PKNNHLRELQGAKERLTLHSADLLDY 67

Query:    65 GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
              +    I G DGVFHTASP+    D+    T+++P + G   V+ +  KAK VKRVV TS
Sbjct:    68 EALCATIDGCDGVFHTASPMT---DD--PETMLEPAVNGAKFVIDAAAKAK-VKRVVFTS 121

Query:   125 SCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVV 184
             S  ++    +    + ++E+ WSD D+CK+   WY Y K +AE+ AW  AK  G+D+VV+
Sbjct:   122 SIGAVYMNPNRDTQAIVDENCWSDLDFCKNTKNWYCYGKMLAEQSAWETAKAKGVDLVVL 181

Query:   185 NPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRASG 244
             NP  V+GP L     ++L+ IL  + G    Y N T  +V + DV   H+L  E   ASG
Sbjct:   182 NPVLVLGPPLQSAINASLVHILKYLTGSAKTYANLTQVYVDVRDVALGHVLVYEAPSASG 241

Query:   245 RLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNS-PHSMDTSKLFELGFVGFKSV 303
             R I + +  H   ++E+L   +P YP  +KCS ++   + P+   T K+ +LG + FK +
Sbjct:   242 RYILAETALHRGEVVEILAKFFPEYPLPTKCSDEKNPRAKPYKFTTQKIKDLG-LEFKPI 300

Query:   304 PQ 305
              Q
Sbjct:   301 KQ 302

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0009809 "lignin biosynthetic process" evidence=NAS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=IDA

GO:0010200 "response to chitin" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

GO:0007623 "circadian rhythm" evidence=IEP

GO:0009409 "response to cold" evidence=IEP

GO:0042754 "negative regulation of circadian rhythm" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9CA28	TKPR2_ARATH	1, ., 1, ., 1, ., -	0.7287	1.0	0.9501	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_VIII001076 hypothetical protein (320 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	305
cd08958	293	cd08958, FR_SDR_e, flavonoid reductase (FR), exten	1e-146
PLN02662	322	PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase	1e-103
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	1e-79
PLN02986	322	PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase	5e-77
PLN02650	351	PLN02650, PLN02650, dihydroflavonol-4-reductase	9e-73
cd05193	295	cd05193, AR_like_SDR_e, aldehyde reductase, flavon	4e-72
PLN02989	325	PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase	3e-69
PLN02214	342	PLN02214, PLN02214, cinnamoyl-CoA reductase	3e-66
PLN02896	353	PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase	3e-66
PLN00198	338	PLN00198, PLN00198, anthocyanidin reductase; Provi	4e-64
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	1e-44
PLN02583	297	PLN02583, PLN02583, cinnamoyl-CoA reductase	1e-39
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	6e-39
PLN02686	367	PLN02686, PLN02686, cinnamoyl-CoA reductase	5e-36
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	2e-33
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	2e-28
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	1e-21
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	1e-20
cd08946	200	cd08946, SDR_e, extended (e) SDRs	1e-20
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	2e-17
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	8e-17
TIGR04180	297	TIGR04180, EDH_00030, NAD dependent epimerase/dehy	9e-17
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	1e-16
COG1087	329	COG1087, GalE, UDP-glucose 4-epimerase [Cell envel	1e-15
cd05273	328	cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-	3e-14
TIGR01179	328	TIGR01179, galE, UDP-glucose-4-epimerase GalE	8e-14
cd05247	323	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase,	9e-14
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	1e-13
pfam07993	245	pfam07993, NAD_binding_4, Male sterility protein	1e-13
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	4e-13
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	5e-13
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	8e-13
cd09812	339	cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid	2e-12
cd09813	335	cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD	3e-12
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	3e-12
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	6e-12
cd05234	305	cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase,	1e-11
cd09811	354	cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD	4e-11
cd05245	293	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	4e-11
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	4e-11
pfam05368	232	pfam05368, NmrA, NmrA-like family	3e-10
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	5e-10
cd05236	320	cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F	1e-09
COG3320	382	COG3320, COG3320, Putative dehydrogenase domain of	8e-09
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	1e-08
cd05244	207	cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu	3e-08
TIGR01746	367	TIGR01746, Thioester-redct, thioester reductase do	5e-08
cd05242	296	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8	9e-08
cd05260	316	cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase	2e-07
cd05253	332	cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimera	3e-07
cd05231	259	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript	6e-07
cd05230	305	cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase	8e-07
cd05229	302	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3	3e-06
cd05252	336	cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydrata	4e-06
TIGR01777	291	TIGR01777, yfcH, TIGR01777 family protein	4e-06
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	6e-06
PLN02240	352	PLN02240, PLN02240, UDP-glucose 4-epimerase	8e-06
cd05246	315	cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra	9e-06
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	1e-05
cd08947	224	cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptio	2e-05
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	2e-05
cd05239	300	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte	3e-05
CHL00194	317	CHL00194, ycf39, Ycf39; Provisional	3e-05
pfam08659	181	pfam08659, KR, KR domain	8e-05
cd08957	307	cd08957, WbmH_like_SDR_e, Bordetella bronchiseptic	1e-04
cd05235	290	cd05235, SDR_e1, extended (e) SDRs, subgroup 1	1e-04
cd05258	337	cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e	1e-04
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	2e-04
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	2e-04
TIGR03443	1389	TIGR03443, alpha_am_amid, L-aminoadipate-semialdeh	4e-04
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	8e-04
PLN00141	251	PLN00141, PLN00141, Tic62-NAD(P)-related group II	0.001
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	0.001
cd05274	375	cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt	0.002
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	0.002
COG2910	211	COG2910, COG2910, Putative NADH-flavin reductase [	0.003
COG1090	297	COG1090, COG1090, Predicted nucleoside-diphosphate	0.003
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	0.003
cd05238	305	cd05238, Gne_like_SDR_e, Escherichia coli Gne (a n	0.004
COG1089	345	COG1089, Gmd, GDP-D-mannose dehydratase [Cell enve	0.004
PLN02166	436	PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase	0.004

>gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs

 Score =  412 bits (1062), Expect = e-146
 Identities = 145/294 (49%), Positives = 188/294 (63%), Gaps = 1/294 (0%)

Query: 4   YCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLM 63
            CVTG +GFI + LVK LL +G+ VR TVRDP D  KV  L EL GA+ERLK+ KADLL 
Sbjct: 1   VCVTGASGFIGSWLVKRLLQRGYTVRATVRDPGDEKKVAHLLELEGAKERLKLFKADLLD 60

Query: 64  EGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLT 123
            GSFD AI G DGVFH ASPV      + +  +I+P +KGTLNVL +C KAKSVKRVV T
Sbjct: 61  YGSFDAAIDGCDGVFHVASPV-DFDSEDPEEEMIEPAVKGTLNVLEACAKAKSVKRVVFT 119

Query: 124 SSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVV 183
           SS +++ +  +  +   ++ES WSD D+CK   LWYA +KT+AEK AW  A++ G+D+V 
Sbjct: 120 SSVAAVVWNPNRGEGKVVDESCWSDLDFCKKTKLWYALSKTLAEKAAWEFAEENGLDLVT 179

Query: 184 VNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRAS 243
           VNPS VVGP L P   S+  LIL+++KG    Y N ++  VH+DDV  AHIL  E+  AS
Sbjct: 180 VNPSLVVGPFLQPSLNSSSQLILSLLKGNAEMYQNGSLALVHVDDVADAHILLYEKPSAS 239

Query: 244 GRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELGF 297
           GR ICSS V     +  +L   YP Y   +K    +   +   + + KL +LGF
Sbjct: 240 GRYICSSHVVTRPELAALLAKKYPQYNIPTKFEDDQPGVARVKLSSKKLKDLGF 293

This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|178268 PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase family protein

 Score =  305 bits (783), Expect = e-103
 Identities = 127/274 (46%), Positives = 178/274 (64%), Gaps = 7/274 (2%)

Query: 5   CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
           CVTG +G+IA+ LVK LL +G+ V+ TVRDP D  K   L  L+GA+ERL + KA+LL E
Sbjct: 8   CVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEE 67

Query: 65  GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
           GSFD  + G +GVFHTASP       + QA LIDP +KGTLNVL SC K  SVKRVV+TS
Sbjct: 68  GSFDSVVDGCEGVFHTASPFYHDV-TDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTS 126

Query: 125 SCSSIRYRHDAQQVSP---LNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDM 181
           S +++ Y  + + ++P   ++E+ +SDP +C+   LWY  +KT+AE+ AW+ AK+ GIDM
Sbjct: 127 SMAAVAY--NGKPLTPDVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKENGIDM 184

Query: 182 VVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETR 241
           V +NP+ V+GPLL P   ++   IL ++ G +  +PN +  +V + DV  AHI A E   
Sbjct: 185 VTINPAMVIGPLLQPTLNTSAEAILNLINGAQT-FPNASYRWVDVRDVANAHIQAFEIPS 243

Query: 242 ASGRLICSSSVAHWSPIIEMLKATYPSYPYESKC 275
           ASGR      V H+S ++++L   YP+     KC
Sbjct: 244 ASGRYCLVERVVHYSEVVKILHELYPTLQLPEKC 277

Length = 322

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score =  243 bits (623), Expect = 1e-79
 Identities = 102/271 (37%), Positives = 150/271 (55%), Gaps = 8/271 (2%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLM-E 64
           VTG TGFIA+H+V+ LL  G+ VR TVR     +K+  L +  G  +RL+ +  D L   
Sbjct: 4   VTGATGFIASHIVEQLLKAGYKVRGTVRSLSKSAKLKALLKAAGYNDRLEFVIVDDLTAP 63

Query: 65  GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
            ++DEA++GVD V H ASP       + +  +IDP ++GTLNVL + K A SVKRVVLTS
Sbjct: 64  NAWDEALKGVDYVIHVASPFPFT-GPDAEDDVIDPAVEGTLNVLEAAKAAGSVKRVVLTS 122

Query: 125 SCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLW-YAYAKTIAEKEAWRIAKDC--GIDM 181
           S +++             E  W+D    K   L  Y  +KT+AEK AW   K+     ++
Sbjct: 123 SVAAVGDPTAEDPGKVFTEEDWNDLTISKSNGLDAYIASKTLAEKAAWEFVKENKPKFEL 182

Query: 182 VVVNPSFVVGP-LLAPQPTSTLLLILAMVKG-LRGEYPNTTVGFVHIDDVVGAHILAMEE 239
           + +NP +V+GP LLA +  S+  LI  ++ G L    PN   G+V + DV  AH+ A+E 
Sbjct: 183 ITINPGYVLGPSLLADELNSSNELINKLLDGKLPAIPPNLPFGYVDVRDVADAHVRALES 242

Query: 240 TRASG-RLICSSSVAHWSPIIEMLKATYPSY 269
             A+G R I S+    +  I ++L+  +P  
Sbjct: 243 PEAAGQRFIVSAGPFSFQEIADLLREEFPQL 273

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|178567 PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase family protein

 Score =  237 bits (606), Expect = 5e-77
 Identities = 120/264 (45%), Positives = 170/264 (64%), Gaps = 3/264 (1%)

Query: 5   CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
           CVTG +G+IA+ +VK LL +G+ V+ TVRD  D  K   L  L+GA+ERLK+ KADLL E
Sbjct: 9   CVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEE 68

Query: 65  GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
            SF++AI+G D VFHTASPV      + Q  LIDP +KGT+NVL++CK+  SVKRV+LTS
Sbjct: 69  SSFEQAIEGCDAVFHTASPVFFTV-KDPQTELIDPALKGTINVLNTCKETPSVKRVILTS 127

Query: 125 SCSSIRYRHDAQQVSP-LNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVV 183
           S +++ +R    + +  ++E+ +SDP  C+    WY  +K +AE  AW  AKD GIDMVV
Sbjct: 128 STAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDNGIDMVV 187

Query: 184 VNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRAS 243
           +NP F+ GPLL P    ++ LI+  + G +  + N    FV + DV  AHI A+E   A+
Sbjct: 188 LNPGFICGPLLQPTLNFSVELIVDFING-KNLFNNRFYRFVDVRDVALAHIKALETPSAN 246

Query: 244 GRLICSSSVAHWSPIIEMLKATYP 267
           GR I    +   + II++L+  +P
Sbjct: 247 GRYIIDGPIMSVNDIIDILRELFP 270

Length = 322

>gnl|CDD|178256 PLN02650, PLN02650, dihydroflavonol-4-reductase

 Score =  227 bits (580), Expect = 9e-73
 Identities = 117/298 (39%), Positives = 173/298 (58%), Gaps = 9/298 (3%)

Query: 5   CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
           CVTG +GFI + LV  LL++G+ VR TVRDP ++ KV  L +L GA  RL + KADL +E
Sbjct: 9   CVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVE 68

Query: 65  GSFDEAIQGVDGVFHTASPV-LVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLT 123
           GSFD+AI+G  GVFH A+P+     D   +  +I P + G L+++ +C KAK+V+R+V T
Sbjct: 69  GSFDDAIRGCTGVFHVATPMDFESKDP--ENEVIKPTVNGMLSIMKACAKAKTVRRIVFT 126

Query: 124 SSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNL--W-YAYAKTIAEKEAWRIAKDCGID 180
           SS  ++      + V   +E  WSD D+C+   +  W Y  +KT+AEK AW+ A + G+D
Sbjct: 127 SSAGTVNVEEHQKPV--YDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAENGLD 184

Query: 181 MVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG-FVHIDDVVGAHILAMEE 239
            + + P+ VVGP ++     +L+  L+++ G    Y     G FVH+DD+  AHI   E 
Sbjct: 185 FISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSIIKQGQFVHLDDLCNAHIFLFEH 244

Query: 240 TRASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELGF 297
             A GR ICSS  A    + +ML+  YP Y   ++    + D       + KL +LGF
Sbjct: 245 PAAEGRYICSSHDATIHDLAKMLREKYPEYNIPARFPGIDEDLKSVEFSSKKLTDLGF 302

Length = 351

>gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs

 Score =  224 bits (572), Expect = 4e-72
 Identities = 103/277 (37%), Positives = 156/277 (56%), Gaps = 11/277 (3%)

Query: 5   CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
            VTG +GF+A+H+V+ LL++G+ VR TVRDP  + KV  L +L+    RL++  ADL  E
Sbjct: 2   LVTGASGFVASHVVEQLLERGYKVRATVRDPSKVKKVNHLLDLDAKPGRLELAVADLTDE 61

Query: 65  GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
            SFDE I+G  GVFH A+P  V + +     +I P I GTLN L +   AKSVKR VLTS
Sbjct: 62  QSFDEVIKGCAGVFHVATP--VSFSSKDPNEVIKPAIGGTLNALKAAAAAKSVKRFVLTS 119

Query: 125 SCSSIRYRHDAQQVSPLNESHWSDPDYC--KHYNLW-YAYAKTIAEKEAWRIAKDCGIDM 181
           S  S+       +   L+E  W+  ++      + W YA +KT+AEK AW+ A +  ID+
Sbjct: 120 SAGSVLIPKPNVEGIVLDEKSWNLEEFDSDPKKSAWVYAASKTLAEKAAWKFADENNIDL 179

Query: 182 VVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYP----NTTVGFVHIDDVVGAHILAM 237
           + V P+  +G +   +  S+    ++++ G  G  P         +VH+ D+  AHI  +
Sbjct: 180 ITVIPTLTIGTIFDSETPSSSGWAMSLITGNEGVSPALALIPPGYYVHVVDICLAHIGCL 239

Query: 238 EETRASGRLICSSSVAHWSPIIEMLKATYPSY--PYE 272
           E   A GR IC++    W+ +++ L+  YPSY  P +
Sbjct: 240 ELPIARGRYICTAGNFDWNTLLKTLRKKYPSYTFPTD 276

This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295

>gnl|CDD|178569 PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase family protein

 Score =  217 bits (554), Expect = 3e-69
 Identities = 112/266 (42%), Positives = 166/266 (62%), Gaps = 6/266 (2%)

Query: 5   CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
           CVTG +G+IA+ +VK LL +G+ +  TVRDP+D  K   L  L+GA+ERLK+ KADLL E
Sbjct: 9   CVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDE 68

Query: 65  GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
           GSF+ AI G + VFHTASPV +    + Q  LI+P + GT+NVL +C K  SVKRV+LTS
Sbjct: 69  GSFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTS 128

Query: 125 SCSSIRYRHDAQQVSP---LNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDM 181
           S +++       ++ P   ++E+ +++P + +    WY  +KT+AE  AWR AKD  ID+
Sbjct: 129 SMAAV--LAPETKLGPNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDNEIDL 186

Query: 182 VVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETR 241
           +V+NP  V GP+L P    ++ +I+ ++KG +  +  T   FV + DV  AH+ A+E   
Sbjct: 187 IVLNPGLVTGPILQPTLNFSVAVIVELMKG-KNPFNTTHHRFVDVRDVALAHVKALETPS 245

Query: 242 ASGRLICSSSVAHWSPIIEMLKATYP 267
           A+GR I    V     I  +L+  +P
Sbjct: 246 ANGRYIIDGPVVTIKDIENVLREFFP 271

Length = 325

>gnl|CDD|177862 PLN02214, PLN02214, cinnamoyl-CoA reductase

 Score =  210 bits (536), Expect = 3e-66
 Identities = 120/302 (39%), Positives = 178/302 (58%), Gaps = 9/302 (2%)

Query: 5   CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
           CVTG  G+IA+ +VK LL++G+ V+ TVR+P+D  K   L EL G +ERL + KADL   
Sbjct: 14  CVTGAGGYIASWIVKILLERGYTVKGTVRNPDD-PKNTHLRELEGGKERLILCKADLQDY 72

Query: 65  GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
            +   AI G DGVFHTASPV    D+  Q  +++P + G   V+++  +AK VKRVV+TS
Sbjct: 73  EALKAAIDGCDGVFHTASPVT---DDPEQ--MVEPAVNGAKFVINAAAEAK-VKRVVITS 126

Query: 125 SCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVV 184
           S  ++    +    + ++ES WSD D+CK+   WY Y K +AE+ AW  AK+ G+D+VV+
Sbjct: 127 SIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVL 186

Query: 185 NPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRASG 244
           NP  V+GP L P   ++L  +L  + G    Y N T  +V + DV  AH+L  E   ASG
Sbjct: 187 NPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEAPSASG 246

Query: 245 RLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNS-PHSMDTSKLFELGFVGFKSV 303
           R + + S  H   ++E+L   +P YP  +KC  ++   + P+     K+ +LG + F S 
Sbjct: 247 RYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLG-LEFTST 305

Query: 304 PQ 305
            Q
Sbjct: 306 KQ 307

Length = 342

>gnl|CDD|178484 PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase

 Score =  210 bits (537), Expect = 3e-66
 Identities = 117/315 (37%), Positives = 178/315 (56%), Gaps = 22/315 (6%)

Query: 2   PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADL 61
             YCVTG TG+I + LVK LL +G+ V  T+RDP     +   W+     +RL++ +ADL
Sbjct: 11  GTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEG---DRLRLFRADL 67

Query: 62  LMEGSFDEAIQGVDGVFHTASPV---LVPYDNNI----QATLIDPCIKGTLNVLSSCKKA 114
             EGSFDEA++G DGVFH A+ +   +    NNI    Q+ +IDP IKGTLNVL SC K+
Sbjct: 68  QEEGSFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKS 127

Query: 115 KSVKRVVLTSSCSSIRYRHDAQQV-SPLNESHWSDPDY---CKHYNLWYAYAKTIAEKEA 170
           K+VKRVV TSS S++  +    +  + ++E+  +  D+    K     Y  +K + E+ A
Sbjct: 128 KTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAA 187

Query: 171 WRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYP-----NTTVG--- 222
           ++ AK+ GID+V V  + V GP L P   S++ ++L+ + G    +      N+ +G   
Sbjct: 188 FKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRMGSIA 247

Query: 223 FVHIDDVVGAHILAMEETRASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDN 282
            VHI+D+  AHI  ME+T+A GR IC       S +I  L   YP    + +  +++  +
Sbjct: 248 LVHIEDICDAHIFLMEQTKAEGRYICCVDSYDMSELINHLSKEYPCSNIQVRLDEEKRGS 307

Query: 283 SPHSMDTSKLFELGF 297
            P  + + KL +LGF
Sbjct: 308 IPSEISSKKLRDLGF 322

Length = 353

>gnl|CDD|215100 PLN00198, PLN00198, anthocyanidin reductase; Provisional

 Score =  205 bits (522), Expect = 4e-64
 Identities = 112/305 (36%), Positives = 168/305 (55%), Gaps = 16/305 (5%)

Query: 5   CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
           CV GGTGF+A+ L+K LL KG+ V TTVRDPE+  K+  L  L    + LKI  ADL  E
Sbjct: 13  CVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGD-LKIFGADLTDE 71

Query: 65  GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
            SF+  I G D VFH A+PV    ++  +  +I P I+G  NVL +C KAKSVKRV+LTS
Sbjct: 72  ESFEAPIAGCDLVFHVATPVNFASEDP-ENDMIKPAIQGVHNVLKACAKAKSVKRVILTS 130

Query: 125 SCSSIRYRHDAQQVSPLNESHWSDPDYC---KHYNLWYAYAKTIAEKEAWRIAKDCGIDM 181
           S +++     +     +NE +W+D ++    K     Y  +KT+AEK AW+ A++  ID+
Sbjct: 131 SAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEENNIDL 190

Query: 182 VVVNPSFVVGPLLAPQPTSTLLLILAM-------VKGLRG-EYPNTTVGFVHIDDVVGAH 233
           + V P+ + GP L     S+L L +++       + GL+G +  + ++   H++DV  AH
Sbjct: 191 ITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVEDVCRAH 250

Query: 234 ILAMEETRASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTS-KL 292
           I   E+  ASGR IC ++      + + L   YP Y   +     +  +    + +S KL
Sbjct: 251 IFLAEKESASGRYICCAANTSVPELAKFLIKRYPQYQVPTDF--GDFPSKAKLIISSEKL 308

Query: 293 FELGF 297
              GF
Sbjct: 309 ISEGF 313

Length = 338

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score =  153 bits (390), Expect = 1e-44
 Identities = 88/263 (33%), Positives = 127/263 (48%), Gaps = 28/263 (10%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           VTG TGF+ ++LV+ALL +G+ VR  VR   D         L+G    +++++ DL    
Sbjct: 3   VTGATGFLGSNLVRALLAQGYRVRALVRSGSD------AVLLDG--LPVEVVEGDLTDAA 54

Query: 66  SFDEAIQGVDGVFHTASPVLVPYDNNIQAT-LIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
           S   A++G D VFH A+              L    ++GT NVL +  +A  V+RVV TS
Sbjct: 55  SLAAAMKGCDRVFHLAA---FTSLWAKDRKELYRTNVEGTRNVLDAALEAG-VRRVVHTS 110

Query: 125 SCSSIRYRHDAQ--QVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMV 182
           S +++    D +  + +P NE      DY +        +K +AE E    A + G+D+V
Sbjct: 111 SIAALGGPPDGRIDETTPWNERP-FPNDYYR--------SKLLAELEVLEAAAE-GLDVV 160

Query: 183 VVNPSFVVGPLLAPQPTSTLLLILAMVKG-LRGEYPNTTVGFVHIDDVVGAHILAMEETR 241
           +VNPS V GP     PTST L +L  + G L   YP     FV + DV   HI AME+ R
Sbjct: 161 IVNPSAVFGPGDEG-PTSTGLDVLDYLNGKLPA-YPPGGTSFVDVRDVAEGHIAAMEKGR 218

Query: 242 ASGRLICSSSVAHWSPIIEMLKA 264
              R I       +  + E L  
Sbjct: 219 RGERYILGGENLSFKQLFETLAE 241

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|178195 PLN02583, PLN02583, cinnamoyl-CoA reductase

 Score =  140 bits (355), Expect = 1e-39
 Identities = 77/249 (30%), Positives = 129/249 (51%), Gaps = 13/249 (5%)

Query: 2   PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADL 61
              CV   +G++   LVK LL +G+ V   V+   +      +  L+  EERLK+   D 
Sbjct: 7   KSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDP 66

Query: 62  LMEGSFDEAIQGVDGVFHTASPVLVPYD-NNIQATLIDPCIKGTLNVLSSCKKAKSVKRV 120
           L   S  +A++G  G+F    P   P D  +    ++D  ++   NVL +C +  ++++V
Sbjct: 67  LDYHSILDALKGCSGLFCCFDP---PSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKV 123

Query: 121 VLTSSCSSIRYRHDAQQVSP-LNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGI 179
           V TSS +++ +R D       ++E  WSD ++C+ + LW+A AKT++EK AW +A D G+
Sbjct: 124 VFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMDRGV 183

Query: 180 DMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEE 239
           +MV +N   ++GP L              +KG    Y N  +  V ++ +V AHI A E+
Sbjct: 184 NMVSINAGLLMGPSLTQHN--------PYLKGAAQMYENGVLVTVDVNFLVDAHIRAFED 235

Query: 240 TRASGRLIC 248
             + GR +C
Sbjct: 236 VSSYGRYLC 244

Length = 297

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score =  138 bits (350), Expect = 6e-39
 Identities = 87/314 (27%), Positives = 125/314 (39%), Gaps = 33/314 (10%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           VTGG GFI +HLV+ LL  GH VR   R  + L               ++ +  DL    
Sbjct: 5   VTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDP---------LLSGVEFVVLDLTDRD 55

Query: 66  SFDEAIQGV-DGVFHTASPVLVPYDNNIQATLI-DPCIKGTLNVLSSCKKAKSVKRVVLT 123
             DE  +GV D V H A+   VP  N        D  + GTLN+L + + A  VKR V  
Sbjct: 56  LVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAG-VKRFVFA 114

Query: 124 SSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNL-WYAYAKTIAEKEAWRIAKDCGIDMV 182
           SS S +                  D D      L  Y  +K  AE+     A+  G+ +V
Sbjct: 115 SSVSVVYGDP---------PPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVV 165

Query: 183 VVNPSFVVGPLLAPQPTSTLL--LILAMVKGLR----GEYPNTTVGFVHIDDVVGAHILA 236
           ++ P  V GP   P  +S ++   I  ++KG      G   + T  FV++DDV  A +LA
Sbjct: 166 ILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLA 225

Query: 237 MEETRASGRLICSSSVAHW-SPIIEMLKATYPSYPYESKC--SKQEGDNSPH-SMDTSKL 292
           +E        I S +       + E +     S           + GD      +D SK 
Sbjct: 226 LENPDGGVFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPLGRRGDLREGKLLDISKA 285

Query: 293 -FELGFVGFKSVPQ 305
              LG+    S+ +
Sbjct: 286 RAALGWEPKVSLEE 299

Length = 314

>gnl|CDD|215370 PLN02686, PLN02686, cinnamoyl-CoA reductase

 Score =  132 bits (333), Expect = 5e-36
 Identities = 83/273 (30%), Positives = 121/273 (44%), Gaps = 45/273 (16%)

Query: 5   CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIM----KAD 60
           CVTGG  F+   +V  LL  G+ VR  V   ED  K+  + E+ G   R         A+
Sbjct: 57  CVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREM-EMFGEMGRSNDGIWTVMAN 115

Query: 61  LLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPC-------------IKGTLNV 107
           L    S  EA  G  GVFHT++              +DP               K + NV
Sbjct: 116 LTEPESLHEAFDGCAGVFHTSA-------------FVDPAGLSGYTKSMAELEAKASENV 162

Query: 108 LSSCKKAKSVKRVVLTSSCSSIRYR----HDAQQVSPLNESHWSDPDYCKHYNLWYAYAK 163
           + +C + +SV++ V TSS  +  +R    HD   V  ++E  WSD  +C+   LWYA  K
Sbjct: 163 IEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPV--IDEESWSDESFCRDNKLWYALGK 220

Query: 164 TIAEKEAWRIAKDCGIDMVVVNPSFVVGP-LLAPQPTSTLLLILAMVKGLRGEYPNTTVG 222
             AEK AWR A+  G+ +  + P+ V GP       T+T    +A +KG +    +  + 
Sbjct: 221 LKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTAT----IAYLKGAQEMLADGLLA 276

Query: 223 FVHIDDVVGAHIL---AMEETRASGRLICSSSV 252
              ++ +  AH+    AM    A GR IC   V
Sbjct: 277 TADVERLAEAHVCVYEAMGNKTAFGRYICFDHV 309

Length = 367

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score =  124 bits (313), Expect = 2e-33
 Identities = 81/254 (31%), Positives = 124/254 (48%), Gaps = 42/254 (16%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           VTG TGF+ + +V+ LL++G  VR  VR   D   +  L      E    I++ DL    
Sbjct: 5   VTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGL----DVE----IVEGDLRDPA 56

Query: 66  SFDEAIQGVDGVFHTASP--VLVP-----YDNNIQATLIDPCIKGTLNVLSSCKKAKSVK 118
           S  +A+ G   +FH A+   +  P     Y  N++         GT N+L +  +A  V+
Sbjct: 57  SLRKAVAGCRALFHVAADYRLWAPDPEEMYAANVE---------GTRNLLRAALEAG-VE 106

Query: 119 RVVLTSSCSSIRYRHDAQQVSPLNESHWSDP-DYCKHYNLWYAYAKTIAEKEAWRIAKDC 177
           RVV TSS +++  R D       +E+  S   D   HY      +K +AE+ A  +A + 
Sbjct: 107 RVVYTSSVATLGVRGDGTPA---DETTPSSLDDMIGHYKR----SKFLAEQAALEMAAEK 159

Query: 178 GIDMVVVNPSFVVGPL-LAPQPTSTLLLILAMVKGLRGEYP---NTTVGFVHIDDVVGAH 233
           G+ +V+VNPS  +GP  + P PT  ++     V  L G+ P   +T +  VH+DDV   H
Sbjct: 160 GLPVVIVNPSTPIGPRDIKPTPTGRII-----VDFLNGKMPAYVDTGLNLVHVDDVAEGH 214

Query: 234 ILAMEETRASGRLI 247
           +LA+E  R   R I
Sbjct: 215 LLALERGRIGERYI 228

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score =  109 bits (274), Expect = 2e-28
 Identities = 65/253 (25%), Positives = 101/253 (39%), Gaps = 41/253 (16%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           VTGGTGFI +HLV+ LL +G+ V    R     S             R++  + DL    
Sbjct: 3   VTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSESL---------NTGRIRFHEGDLTDPD 53

Query: 66  SFDEAIQGV--DGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLT 123
           + +  +  V  D V H A+   V       A  I   + GTL +L + ++A  VKR V  
Sbjct: 54  ALERLLAEVQPDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEAARRAG-VKRFVFA 112

Query: 124 SSCS-----SIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCG 178
           SS       +     +   + PL+                YA AK  AE+     A+  G
Sbjct: 113 SSSEVYGDVADPPITEDTPLGPLSP---------------YAAAKLAAERLVEAYARAYG 157

Query: 179 IDMVVVNPSFVVGPLLAPQPTSTLL--LILAMVKGLRGEYPNTTVG-----FVHIDDVVG 231
           +  V++    V GP       + ++  LI  +++G          G     F+++DDV  
Sbjct: 158 LRAVILRLFNVYGPGNPDPFVTHVIPALIRRILEGKPILLLGD--GTQRRDFLYVDDVAR 215

Query: 232 AHILAMEETRASG 244
           A +LA+E      
Sbjct: 216 AILLALEHPDGGE 228

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score = 92.3 bits (230), Expect = 1e-21
 Identities = 75/246 (30%), Positives = 111/246 (45%), Gaps = 36/246 (14%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           VTGG GFI +HLV+ LL++GH V   V D  +LS  G    L   +  +K ++ D+  + 
Sbjct: 4   VTGGAGFIGSHLVERLLERGHEV--IVLD--NLS-TGKKENLPEVKPNVKFIEGDIRDDE 58

Query: 66  SFDEAIQGVDGVFHTASPVLVP-------YDNNIQATLIDPCIKGTLNVLSSCKKAKSVK 118
             + A +GVD VFH A+   VP        D+ +          GTLN+L + +KA  VK
Sbjct: 59  LVEFAFEGVDYVFHQAAQASVPRSIEDPIKDHEVNVL-------GTLNLLEAARKAG-VK 110

Query: 119 RVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCG 178
           R V  SS S            P +E H  +P         YA +K   E      A+  G
Sbjct: 111 RFVYASSSSVY-GDPPYL---PKDEDHPPNPLSP------YAVSKYAGELYCQVFARLYG 160

Query: 179 IDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYP------NTTVGFVHIDDVVGA 232
           +  V +    V GP   P      ++ + + + L+GE P        T  F +++DVV A
Sbjct: 161 LPTVSLRYFNVYGPRQDPNGGYAAVIPIFIERALKGEPPTIYGDGEQTRDFTYVEDVVEA 220

Query: 233 HILAME 238
           ++LA  
Sbjct: 221 NLLAAT 226

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score = 89.7 bits (223), Expect = 1e-20
 Identities = 64/249 (25%), Positives = 102/249 (40%), Gaps = 20/249 (8%)

Query: 5   CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
            VTG  GFI +HL + LL +GH VR         +  G     N   +R   +  D+   
Sbjct: 3   LVTGADGFIGSHLTERLLREGHEVRALD-IYNSFNSWG--LLDNAVHDRFHFISGDVRDA 59

Query: 65  GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
              +  ++  D VFH A+ + +PY      + ++  + GTLNVL +       KRVV TS
Sbjct: 60  SEVEYLVKKCDVVFHLAALIAIPYSYTAPLSYVETNVFGTLNVLEAACV-LYRKRVVHTS 118

Query: 125 SCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLW-YAYAKTIAEKEAWRIAKDCGIDMVV 183
           +     Y   AQ V P++E H   P    +     Y+ +K  A++ A+   +  G+ + +
Sbjct: 119 TSEV--YGT-AQDV-PIDEDH---PLLYINKPRSPYSASKQGADRLAYSYGRSFGLPVTI 171

Query: 184 VNPSFVVGPLL-----APQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAME 238
           + P    GP        P   S   +   ++    G  P     FV   D     I  ++
Sbjct: 172 IRPFNTYGPRQSARAVIPTIISQRAIGQRLINLGDGS-PTRDFNFVK--DTARGFIDILD 228

Query: 239 ETRASGRLI 247
              A G +I
Sbjct: 229 AIEAVGEII 237

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 87.0 bits (216), Expect = 1e-20
 Identities = 64/250 (25%), Positives = 94/250 (37%), Gaps = 59/250 (23%)

Query: 4   YCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLM 63
             VTGG GFI +HLV+ LL++GH V    R                              
Sbjct: 1   ILVTGGAGFIGSHLVRRLLERGHEVVVIDRL----------------------------- 31

Query: 64  EGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLT 123
                      D V H A+ V VP   +      +  + GTLN+L + +KA  VKR V  
Sbjct: 32  -----------DVVVHLAALVGVPASWDNPDEDFETNVVGTLNLLEAARKAG-VKRFVYA 79

Query: 124 SSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVV 183
           SS S     + + +  P  E     P         Y  +K  AE       +  G+ +V+
Sbjct: 80  SSASV----YGSPEGLPEEEETPPRPLSP------YGVSKLAAEHLLRSYGESYGLPVVI 129

Query: 184 VNPSFVVGPLLAPQPTSTLL---LILAMVKGLR---GEYPNTTVGFVHIDDVVGAHILAM 237
           +  + V GP    +P    +    I   ++G         N T  F+H+DDVV A + A+
Sbjct: 130 LRLANVYGP--GQRPRLDGVVNDFIRRALEGKPLTVFGGGNQTRDFIHVDDVVRAILHAL 187

Query: 238 EETRASGRLI 247
           E     G + 
Sbjct: 188 ENPLEGGGVY 197

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 80.5 bits (199), Expect = 2e-17
 Identities = 69/253 (27%), Positives = 102/253 (40%), Gaps = 48/253 (18%)

Query: 6   VTGGTGFIAAHLVKALLDKGHM--VRTTVRDP-----EDLSKVGFLWELNGAEERLKIMK 58
           VTGG GF+  H+V+ LL +G +  VR           ED SK+            +  ++
Sbjct: 2   VTGGGGFLGRHIVRLLLREGELQEVRVFDLRFSPELLEDFSKLQ----------VITYIE 51

Query: 59  ADLLMEGSFDEAIQGVDGVFHTAS--PVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKS 116
            D+  +     A+QG D V HTA+   V      +   T++   +KGT NVL +C KA  
Sbjct: 52  GDVTDKQDLRRALQGSDVVIHTAAIIDVFGKAYRD---TIMKVNVKGTQNVLDACVKA-G 107

Query: 117 VKRVVLTSSCSSIRYRHDAQQVSPLNE-----SHWSDPDYCKHYNLWYAYAKTIAEK--- 168
           V+ +V TSS   +      Q +   +E     S   DP         Y  +K +AEK   
Sbjct: 108 VRVLVYTSSMEVVGPNSYGQPIVNGDETTPYESTHQDP---------YPESKALAEKLVL 158

Query: 169 -EAWRIAKDCGIDMVV-VNPSFVVGP---LLAPQPTSTLLLILAMVKGLRGEYPNTTVGF 223
                  K+ G      + P+ + G     L P     L   LA  +       N     
Sbjct: 159 KANGSTLKNGGRLYTCALRPAGIFGEGDPFLFPFLVRLLKNGLAKFRTGD---KNVLSDR 215

Query: 224 VHIDDVVGAHILA 236
           V++ +V  AHILA
Sbjct: 216 VYVGNVAWAHILA 228

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 79.0 bits (195), Expect = 8e-17
 Identities = 64/241 (26%), Positives = 103/241 (42%), Gaps = 36/241 (14%)

Query: 6   VTGGTGFIAAHLVKALLDK-GHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
           VTGG+GF    LVK LL++ G  VR+    P   +    L         ++ +K D+   
Sbjct: 4   VTGGSGFFGERLVKQLLERGGTYVRSFDIAPPGEA----LSAWQ--HPNIEFLKGDITDR 57

Query: 65  GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
              ++A+ G D VFHTA+ V +    ++     +  + GT NVL +C++   V++ V TS
Sbjct: 58  NDVEQALSGADCVFHTAAIVPLAGPRDL---YWEVNVGGTQNVLDACQRC-GVQKFVYTS 113

Query: 125 SCSSIRYR----HDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC--G 178
           S SS+ +     H+  +  P                    YA+T A  E   +  +    
Sbjct: 114 S-SSVIFGGQNIHNGDETLPYPPLD------------SDMYAETKAIAEIIVLEANGRDD 160

Query: 179 IDMVVVNPSFVVGP---LLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHIL 235
           +    + P+ + GP    L P         L  VK + G   N  V F ++ ++  AHIL
Sbjct: 161 LLTCALRPAGIFGPGDQGLVPILFEWAEKGL--VKFVFGR-GNNLVDFTYVHNLAHAHIL 217

Query: 236 A 236
           A
Sbjct: 218 A 218

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family

 Score = 78.5 bits (194), Expect = 9e-17
 Identities = 48/141 (34%), Positives = 79/141 (56%), Gaps = 7/141 (4%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGA-EERLKIMKADLLME 64
           VTG  GFI +HLV+AL+ +G+ VR  V      +  G+L       +++++++  D+   
Sbjct: 3   VTGADGFIGSHLVEALVRQGYEVRAFVL-YNSFNSWGWLDTSPPEVKDKIEVVTGDIRDP 61

Query: 65  GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
            S  +A++G D VFH A+ + +PY      + +D  + GTLNVL + +    V++VV TS
Sbjct: 62  DSVRKAMKGCDVVFHLAALIAIPYSYIAPDSYVDTNVTGTLNVLQAARDL-GVEKVVHTS 120

Query: 125 SCSSIRYRHDAQQVSPLNESH 145
             +S  Y   AQ V P++E H
Sbjct: 121 --TSEVY-GTAQYV-PIDEKH 137

This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 78.2 bits (193), Expect = 1e-16
 Identities = 60/263 (22%), Positives = 94/263 (35%), Gaps = 43/263 (16%)

Query: 4   YCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADL-- 61
             VTGGTGF+  HLVK LL+ G  V   VR          + E     +R+++++ DL  
Sbjct: 1   VFVTGGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAHERIEEAGLEADRVRVLEGDLTQ 60

Query: 62  ----LMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQ-ATLIDPCIKGTLNVLSSCKKAKS 116
               L   +  E    VD V H A+       N     T ID    GT +VL    +   
Sbjct: 61  PNLGLSAAASRELAGKVDHVIHCAASYDFQAPNEDAWRTNID----GTEHVLELAARLDI 116

Query: 117 VKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPD-YCKHYNLWYAYAKTIAEKEAWRIAK 175
            +   ++++  +                   +P    K+    Y  +K  AE+     A 
Sbjct: 117 QRFHYVSTAYVAGNR-------EGNIRETELNPGQNFKN---PYEQSKAEAEQLVRAAAT 166

Query: 176 DCGIDMVVVNPSFVVGPLLAPQPTST-------LLLILAMVKGLRGEY------PNTTVG 222
              I + V  PS VVG       T           L+  + K   G +          + 
Sbjct: 167 Q--IPLTVYRPSIVVG----DSKTGRIEKIDGLYELLNLLAK--LGRWLPMPGNKGARLN 218

Query: 223 FVHIDDVVGAHILAMEETRASGR 245
            V +D V  A +   ++  A+G+
Sbjct: 219 LVPVDYVADAIVYLSKKPEANGQ 241

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

 Score = 75.7 bits (187), Expect = 1e-15
 Identities = 65/275 (23%), Positives = 109/275 (39%), Gaps = 70/275 (25%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           VTGG G+I +H V+ LL  GH V   V D  +LS  G    L   + +    + DLL   
Sbjct: 5   VTGGAGYIGSHTVRQLLKTGHEV--VVLD--NLSN-GHKIALLKLQFKFY--EGDLLDRA 57

Query: 66  SFDEAI--QGVDGVFHTASPVLVP---------YDNNIQATLIDPCIKGTLNVLSSCKKA 114
                     +D V H A+ + V          YDNN+          GTLN++ +  + 
Sbjct: 58  LLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVV---------GTLNLIEAMLQT 108

Query: 115 KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIA 174
             VK+ + +S+ +     +     SP++E+    P         Y  +K ++E     I 
Sbjct: 109 -GVKKFIFSSTAA----VYGEPTTSPISETSPLAP------INPYGRSKLMSE----EIL 153

Query: 175 KDC----GIDMVVV--------NPSFVVGPLLAPQPTSTLLLILAMV-KGLR-------G 214
           +D        +V++         P   +G        + L+ + A    G R        
Sbjct: 154 RDAAKANPFKVVILRYFNVAGACPDGTLGQ--RYPGATLLIPVAAEAALGKRDKLFIFGD 211

Query: 215 EYPNTTVG-----FVHIDDVVGAHILAMEETRASG 244
           +Y  T  G     ++H+DD+  AH+LA++  +  G
Sbjct: 212 DYD-TKDGTCIRDYIHVDDLADAHVLALKYLKEGG 245

Length = 329

>gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs

 Score = 71.4 bits (175), Expect = 3e-14
 Identities = 58/255 (22%), Positives = 91/255 (35%), Gaps = 46/255 (18%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           VTG  GFI +HL + L  +GH VR       D      + +    +E       DL    
Sbjct: 5   VTGAGGFIGSHLAERLKAEGHYVRGA-----DWKSPEHMTQPTDDDE---FHLVDLREME 56

Query: 66  SFDEAIQGVDGVFH-----------TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKA 114
           +  +A +GVD VFH            ++  ++ Y+N    TLI+       N+L + +  
Sbjct: 57  NCLKATEGVDHVFHLAADMGGMGYIQSNHAVIMYNN----TLIN------FNMLEAARIN 106

Query: 115 KSVKRVVLTSS-CSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRI 173
             V+R +  SS C    Y    Q  + +      D    +  +  Y + K   E+     
Sbjct: 107 G-VERFLFASSACV---YPEFKQLETTVVRLREEDAWPAEPQDA-YGWEKLATERLCQHY 161

Query: 174 AKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPN----------TTVGF 223
            +D GI+  +V    + GP              AM + +                 T  F
Sbjct: 162 NEDYGIETRIVRFHNIYGPRGTWDGGRE-KAPAAMCRKVATAKDGDRFEIWGDGLQTRSF 220

Query: 224 VHIDDVVGAHILAME 238
            +IDD V      ME
Sbjct: 221 TYIDDCVEGLRRLME 235

This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328

>gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE

 Score = 70.4 bits (173), Expect = 8e-14
 Identities = 69/269 (25%), Positives = 113/269 (42%), Gaps = 65/269 (24%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEE--RLKIMKADL-- 61
           VTGG G+I +H V+ LL+ GH V   + D  +LS  G    L   E    +  ++ DL  
Sbjct: 4   VTGGAGYIGSHTVRQLLESGHEV--VILD--NLSN-GSREALPRGERITPVTFVEGDLRD 58

Query: 62  --LMEGSFDEAIQGVDGVFHTASPVLVP---------YDNNIQATLIDPCIKGTLNVLSS 110
             L++  F+E    +D V H A  + V          Y NN+          GTLN+L +
Sbjct: 59  RELLDRLFEE--HKIDAVIHFAGLIAVGESVQKPLKYYRNNVV---------GTLNLLEA 107

Query: 111 CKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEA 170
            ++A  VK+ + +SS +     +      P++E     P         Y  +K ++E+  
Sbjct: 108 MQQA-GVKKFIFSSSAAV----YGEPSSIPISEDSPLGPINP------YGRSKLMSEQIL 156

Query: 171 WRIAK-DCGIDMVVV--------NPSFVVGPLLAPQPTSTLLLILAMVK-GLR------- 213
             + K D     V++        +PS  +G    P   + L+     V  G R       
Sbjct: 157 RDLQKADPDWSYVILRYFNVAGAHPSGDIGE--DPPGITHLIPYACQVAVGKRDKLTIFG 214

Query: 214 GEYPN---TTV-GFVHIDDVVGAHILAME 238
            +YP    T V  ++H+ D+  AH+ A+E
Sbjct: 215 TDYPTPDGTCVRDYIHVMDLADAHLAALE 243

Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328

>gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs

 Score = 70.3 bits (173), Expect = 9e-14
 Identities = 89/341 (26%), Positives = 142/341 (41%), Gaps = 86/341 (25%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELN-GAEERLKIMKADLLME 64
           VTGG G+I +H V  LL+ G+ V   V D  +LS  G    L    + R++  + D+   
Sbjct: 4   VTGGAGYIGSHTVVELLEAGYDV--VVLD--NLSN-GHREALPRIEKIRIEFYEGDIRDR 58

Query: 65  GSFDEAIQ--GVDGVFHTASPVLVP---------YDNNIQATLIDPCIKGTLNVLSSCKK 113
            + D+      +D V H A+   V          YDNN         + GTLN+L + + 
Sbjct: 59  AALDKVFAEHKIDAVIHFAALKAVGESVQKPLKYYDNN---------VVGTLNLLEAMRA 109

Query: 114 AKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRI 173
              VK  V +SS +     +   +  P+ E    +P         Y   K + E    +I
Sbjct: 110 HG-VKNFVFSSSAAV----YGEPETVPITEEAPLNPTNP------YGRTKLMVE----QI 154

Query: 174 AKDC----GIDMVVV--------NPSFVVGPLLAPQPTSTLLLILAMVK-GLRGE----- 215
            +D     G++ V++        +PS ++G    PQ  + L+  +  V  G R +     
Sbjct: 155 LRDLAKAPGLNYVILRYFNPAGAHPSGLIGE--DPQIPNNLIPYVLQVALGRREKLAIFG 212

Query: 216 --YPNTTVG-----FVHIDDVVGAHILAMEETRA-SGRLICS------SSVAHWSPIIEM 261
             YP T  G     ++H+ D+  AH+LA+E+     G  I +       SV     ++E 
Sbjct: 213 DDYP-TPDGTCVRDYIHVVDLADAHVLALEKLENGGGSEIYNLGTGRGYSVLE---VVEA 268

Query: 262 L-KATYPSYPYESKCSKQEGDNSPHSM--DTSKLF-ELGFV 298
             K +    PYE    ++ GD  P S+  D SK   ELG+ 
Sbjct: 269 FEKVSGKPIPYE-IAPRRAGD--PASLVADPSKAREELGWK 306

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 69.2 bits (169), Expect = 1e-13
 Identities = 55/243 (22%), Positives = 80/243 (32%), Gaps = 55/243 (22%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           VTG TGF+   +V+ LL +GH VR  VR+PE       L    G E  L     DL    
Sbjct: 5   VTGATGFVGGAVVRELLARGHEVRAAVRNPE---AAAALA--GGVEVVL----GDLRDPK 55

Query: 66  SFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAK-SVKRVVLTS 124
           S     +GVDGV   +  +    D +     +         V+ + + A   VK  V  S
Sbjct: 56  SLVAGAKGVDGVLLISGLL----DGSDAFRAVQVT-----AVVRAAEAAGAGVKHGVSLS 106

Query: 125 SCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVV 184
                    DA   S L  +                              +  GI    +
Sbjct: 107 V-----LGADAASPSALARAKA----------------------AVEAALRSSGIPYTTL 139

Query: 185 -NPSFVVGPLLAPQPTSTLLLILAMVKGL-RGEYPNTTVGFVHIDDVVGAHILAMEETRA 242
              +F +G   A        +  A   GL         +  + +DDV  A   A++    
Sbjct: 140 RRAAFYLGAGAA-------FIEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPAT 192

Query: 243 SGR 245
           +GR
Sbjct: 193 AGR 195

Length = 275

>gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein

 Score = 68.8 bits (169), Expect = 1e-13
 Identities = 56/260 (21%), Positives = 89/260 (34%), Gaps = 53/260 (20%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTT--VR--DPEDLSK-------VGFLWELNGAEERL 54
           +TG TGF+   L++ LL     V+    VR  D E   +          L++   A ER+
Sbjct: 1   LTGATGFLGKVLLEKLLRSTPEVKIYCLVRAKDGESALERLRQELLKYGLFDRLKALERI 60

Query: 55  KIMKADL------LMEGSFDEAIQGVDGVFHTASPV--LVPYDNNIQATLIDPCIKGTLN 106
             +  DL      L +  F E  + VD + H A+ V  + PY       L    + GT  
Sbjct: 61  IPVAGDLSEPNLGLSDEDFQELAEEVDVIIHNAATVNFVEPYS-----DLRATNVLGTRE 115

Query: 107 VLSSCKKAKSVKRVVLTSS--CSSIRYRH----DAQQVSPLNESHWSDPDYCKHYNLWYA 160
           VL   K+ K        S+   +  R         +            P+        Y 
Sbjct: 116 VLRLAKQMKK-LPFHHVSTAYVNGERGGLLEEKPYKLDEDEPALLGGLPNG-------YT 167

Query: 161 YAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQP--------TSTLLLILAMVKGL 212
            +K +AE+     A   G+ +V+  PS + G     +             LL  A +  L
Sbjct: 168 QSKWLAEQLVREAAG--GLPVVIYRPSIITGE---SRTGWINGDDFGPRGLLGGAGLGVL 222

Query: 213 RGEYPN--TTVGFVHIDDVV 230
                +    +  V +D V 
Sbjct: 223 PDILGDPDARLDLVPVDYVA 242

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 66.5 bits (163), Expect = 4e-13
 Identities = 56/190 (29%), Positives = 76/190 (40%), Gaps = 52/190 (27%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           V G TG +  H+V+ LLD+G+ VR  VRDP    K+    E  GAE    ++  DL    
Sbjct: 4   VVGATGKVGRHVVRELLDRGYQVRALVRDPSQAEKL----EAAGAE----VVVGDLTDAE 55

Query: 66  SFDEAIQGVDGVFHTA--------SPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSV 117
           S   A++G+D V   A            V YD             G +N++ + KKA  V
Sbjct: 56  SLAAALEGIDAVISAAGSGGKGGPRTEAVDYD-------------GNINLIDAAKKAG-V 101

Query: 118 KRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC 177
           KR VL SS         A + S   E+              Y  AK  AE       +  
Sbjct: 102 KRFVLVSS-------IGADKPSHPLEALGP-----------YLDAKRKAEDY----LRAS 139

Query: 178 GIDMVVVNPS 187
           G+D  +V P 
Sbjct: 140 GLDYTIVRPG 149

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 66.2 bits (162), Expect = 5e-13
 Identities = 39/187 (20%), Positives = 59/187 (31%), Gaps = 41/187 (21%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           V G TG     LVK LL +GH V    R+P                  +  ++ DL    
Sbjct: 3   VIGATGKTGRRLVKELLARGHQVTALSRNPSKA-----------PAPGVTPVQKDLFDLA 51

Query: 66  SFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSS 125
              EA+ GVD V           D             G  ++L +  +A  V+R+V+ S+
Sbjct: 52  DLAEALAGVDAVVDAFGARPDDSD-------------GVKHLLDAAARAG-VRRIVVVSA 97

Query: 126 CSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVN 185
               R      +          D      Y    A         A  + +  G+D  +V 
Sbjct: 98  AGLYRDEPGTFR--------LDDAPLFPPYARAKA--------AAEELLRASGLDWTIVR 141

Query: 186 PSFVVGP 192
           P  +   
Sbjct: 142 PGALFDE 148

Length = 182

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 67.3 bits (165), Expect = 8e-13
 Identities = 65/235 (27%), Positives = 99/235 (42%), Gaps = 30/235 (12%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           + GG GFI +HLV ALL++G  VR   R           +EL         +K D     
Sbjct: 4   IVGGNGFIGSHLVDALLEEGPQVRVFDRSIP-------PYELPLGGVDY--IKGDYENRA 54

Query: 66  SFDEAIQGVDGVFHTASPVLVPYDNNIQATL-IDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
             + A+ G+D V H AS    P  +N    L I   +  T+ +L +C  A  + +++  S
Sbjct: 55  DLESALVGIDTVIHLASTT-NPATSNKNPILDIQTNVAPTVQLLEACAAAG-IGKIIFAS 112

Query: 125 SCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVV 184
           S  ++    +     P++ES  + P         Y  +K   EK         G+D  V+
Sbjct: 113 SGGTVYGVPEQL---PISESDPTLP------ISSYGISKLAIEKYLRLYQYLYGLDYTVL 163

Query: 185 NPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG-------FVHIDDVVGA 232
             S   GP   P     ++ I A+ K LRGE P    G       +++IDD+V A
Sbjct: 164 RISNPYGPGQRPDGKQGVIPI-ALNKILRGE-PIEIWGDGESIRDYIYIDDLVEA 216

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187672 cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid dehydrogenase (3b-HSD)-like, subgroup1, extended (e) SDRs

 Score = 66.4 bits (162), Expect = 2e-12
 Identities = 75/292 (25%), Positives = 127/292 (43%), Gaps = 56/292 (19%)

Query: 6   VTGGTGFIAAHLVKALLDKG-HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
           +TGG G+    L  AL   G H++   +R P+         EL    E +K ++AD+   
Sbjct: 4   ITGGGGYFGFRLGCALAKSGVHVILFDIRRPQ--------QEL---PEGIKFIQADVRDL 52

Query: 65  GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPC-IKGTLNVLSSCKKAKSVKRVVLT 123
              ++A+ GVD VFH AS  +   +  +   LI+   ++GT N++  C   + V R++ T
Sbjct: 53  SQLEKAVAGVDCVFHIASYGMSGRE-QLNRELIEEINVRGTENIIQVC-VRRRVPRLIYT 110

Query: 124 SSCS------SIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEK---EAWRIA 174
           S+ +       IR   ++    PL+       D+       Y+  K+IAE+   +A  + 
Sbjct: 111 STFNVIFGGQPIRNGDESLPYLPLDLH----VDH-------YSRTKSIAEQLVLKANNMP 159

Query: 175 KDCG---IDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGL-RGEY--PNTTVGFVHIDD 228
                  +    + P+ + GP    +      ++  + KGL    Y  P + V FVH+D+
Sbjct: 160 LPNNGGVLRTCALRPAGIYGP---GEQRHLPRIVSYIEKGLFMFVYGDPKSLVEFVHVDN 216

Query: 229 VVGAHILAMEETRASGRLICSSSVAHWS------------PIIEMLKATYPS 268
           +V AHILA E    +   I S      S            P++E L  ++PS
Sbjct: 217 LVQAHILAAEALTTAKGYIASGQAYFISDGRPVNNFEFFRPLVEGLGYSFPS 268

An uncharacterized subgroup of the 3b-HSD-like extended-SDR family. Proteins in this subgroup have the characteristic active site tetrad and NAD(P)-binding motif of extended-SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 339

>gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs

 Score = 65.8 bits (161), Expect = 3e-12
 Identities = 69/249 (27%), Positives = 113/249 (45%), Gaps = 43/249 (17%)

Query: 4   YCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLL- 62
             V GG+GF+  HLV+ LL +G     TV    D+     L   +    R++    DL  
Sbjct: 2   CLVVGGSGFLGRHLVEQLLRRG---NPTVH-VFDIRPTFELDPSS--SGRVQFHTGDLTD 55

Query: 63  ---MEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKR 119
              +E +F+E  +G + VFHTASP     ++++   +    ++GT NV+ +C+K   VK+
Sbjct: 56  PQDLEKAFNE--KGPNVVFHTASPDH-GSNDDLYYKVN---VQGTRNVIEACRKC-GVKK 108

Query: 120 VVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRI-AKDCG 178
           +V TSS S +    D       +ES    PD  KH +   AY +T A  E   + A D  
Sbjct: 109 LVYTSSASVVFNGQDIING---DES-LPYPD--KHQD---AYNETKALAEKLVLKANDPE 159

Query: 179 IDMVVV--NPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG-------FVHIDDV 229
             ++     P+ + GP           L+  ++K  +       +G       F ++++V
Sbjct: 160 SGLLTCALRPAGIFGP-------GDRQLVPGLLKAAKNGKTKFQIGDGNNLFDFTYVENV 212

Query: 230 VGAHILAME 238
             AHILA +
Sbjct: 213 AHAHILAAD 221

This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 65.0 bits (159), Expect = 3e-12
 Identities = 39/184 (21%), Positives = 65/184 (35%), Gaps = 43/184 (23%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           VTG TG +   +V+ LL K   V   VR+PE           +G E R    + D     
Sbjct: 3   VTGATGKLGTAVVELLLAKVASVVALVRNPEKAKAFAA----DGVEVR----QGDYDDPE 54

Query: 66  SFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSS 125
           + + A +GVD +       L+   +      ++  I+   N + + K+A  VK +V  S+
Sbjct: 55  TLERAFEGVDRLL------LISPSD------LEDRIQQHKNFIDAAKQAG-VKHIVYLSA 101

Query: 126 CSSIRYRHDAQQVSPLNESHW----------SDPDYCKHYNLWYA-----YAKTIAEKEA 170
                    A + SP   +            S   Y      W+      +  +I E+  
Sbjct: 102 S-------GADEDSPFLLARDHGATEKYLEASGIPYTILRPGWFMDNLLEFLPSILEEGT 154

Query: 171 WRIA 174
               
Sbjct: 155 IYGP 158

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 64.7 bits (158), Expect = 6e-12
 Identities = 57/243 (23%), Positives = 83/243 (34%), Gaps = 30/243 (12%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAE-ERLKIMKADLLME 64
           VTG  G +   L +  L     V                      E  RL I        
Sbjct: 3   VTGAAGGLGRLLARR-LAASPRVIGVDGLDR----RRPPGSPPKVEYVRLDIRDPAAADV 57

Query: 65  GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
                  +  D V H A  +  P D    A      + GT NVL +C  A  V RVV+TS
Sbjct: 58  F----REREADAVVHLAFILDPPRD---GAERHRINVDGTQNVLDACAAA-GVPRVVVTS 109

Query: 125 SCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAW-RIA--KDCGIDM 181
           S +      D    +P   +  +           +AY++  AE E        +   +++
Sbjct: 110 SVAVYGAHPD----NPAPLTEDAPLRGSPE----FAYSRDKAEVEQLLAEFRRRHPELNV 161

Query: 182 VVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETR 241
            V+ P+ ++GP         L      V G     P     F+H DDV  A +LA+    
Sbjct: 162 TVLRPATILGPGTRNTTRDFLSPRRLPVPGGFD-PP---FQFLHEDDVARALVLAVRA-G 216

Query: 242 ASG 244
           A+G
Sbjct: 217 ATG 219

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs

 Score = 63.9 bits (156), Expect = 1e-11
 Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 21/131 (16%)

Query: 3   EYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLS--KVGFLWELNGAEERLKIMKAD 60
              VTGG GFI +HLV  LL++G+ V   V D  +LS  +   +       +  + +K D
Sbjct: 1   RILVTGGAGFIGSHLVDRLLEEGNEV--VVVD--NLSSGRRENIEPEF-ENKAFRFVKRD 55

Query: 61  LLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDP------CIKGTLNVLSSCKKA 114
           LL + +   A +  D VFH A+      + +++    DP       +  T NVL + +  
Sbjct: 56  LL-DTADKVAKKDGDTVFHLAA------NPDVRLGATDPDIDLEENVLATYNVLEAMRAN 108

Query: 115 KSVKRVVLTSS 125
             VKR+V  SS
Sbjct: 109 G-VKRIVFASS 118

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs

 Score = 62.9 bits (153), Expect = 4e-11
 Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 13/130 (10%)

Query: 4   YCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEE------RLKIM 57
             VTGG GF+  H+++ LL++    +  +++   L K  F  EL    E       +  +
Sbjct: 2   CLVTGGGGFLGQHIIRLLLER----KEELKEIRVLDKA-FGPELIEHFEKSQGKTYVTDI 56

Query: 58  KADLLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSV 117
           + D+        A QGV  V HTA+ V V    N +  L +  + GT  VL +C +  +V
Sbjct: 57  EGDIKDLSFLFRACQGVSVVIHTAAIVDVFGPPNYE-ELEEVNVNGTQAVLEACVQN-NV 114

Query: 118 KRVVLTSSCS 127
           KR+V TSS  
Sbjct: 115 KRLVYTSSIE 124

This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354

>gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2

 Score = 62.0 bits (151), Expect = 4e-11
 Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 7/75 (9%)

Query: 5  CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
           VTG TG++   LV  LL +GH VR  VR PE L      W      ER+ +++ DL   
Sbjct: 2  LVTGATGYVGGRLVPRLLQEGHQVRALVRSPEKL--ADRPW-----SERVTVVRGDLEDP 54

Query: 65 GSFDEAIQGVDGVFH 79
           S   A++G+D  ++
Sbjct: 55 ESLRAALEGIDTAYY 69

This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 60.1 bits (146), Expect = 4e-11
 Identities = 40/120 (33%), Positives = 58/120 (48%), Gaps = 15/120 (12%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           + G TGFI   L + LL++GH V   VR+ + LSK          +E + +++ DL    
Sbjct: 3   ILGATGFIGRALARELLEQGHEVTLLVRNTKRLSK--------EDQEPVAVVEGDLRDLD 54

Query: 66  SFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSS 125
           S  +A+QGVD V H A       D           ++GT NVL + K+A  VK  +  SS
Sbjct: 55  SLSDAVQGVDVVIHLAGAPRDTRDFCEVD------VEGTRNVLEAAKEA-GVKHFIFISS 107

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|191263 pfam05368, NmrA, NmrA-like family

 Score = 58.8 bits (143), Expect = 3e-10
 Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 12/76 (15%)

Query: 6  VTGGTGFIAAHLVKALLDKGHMVRTTVRDPE-DLSKVGFLWEL--NGAEERLKIMKADLL 62
          V G TG+    +V+A L  GH VR  VRDP+ +L+K      L   G E    +++ DL 
Sbjct: 3  VFGATGYQGGSVVRASLKAGHPVRALVRDPKSELAK-----SLKAAGVE----LVEGDLD 53

Query: 63 MEGSFDEAIQGVDGVF 78
             S  EA++GVD VF
Sbjct: 54 DHESLVEALKGVDVVF 69

NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 58.9 bits (143), Expect = 5e-10
 Identities = 64/251 (25%), Positives = 96/251 (38%), Gaps = 45/251 (17%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           VTG  GFI   LV  LL +G  VR  VR+ E+      L              A+L    
Sbjct: 4   VTGANGFIGRALVDKLLSRGEEVRIAVRNAENAEPSVVL--------------AELPDID 49

Query: 66  SFDEAIQGVDGVFHTASPVLVPYDNNIQATLID---PCIKGTLNVLSSCKKAKSVKRVVL 122
           SF +   GVD V H A+ V V  ++     L D      + T  +  +  +   VKR V 
Sbjct: 50  SFTDLFLGVDAVVHLAARVHVM-NDQGADPLSDYRKVNTELTRRLARAAARQ-GVKRFVF 107

Query: 123 TSSCSSIRYRHDAQQVSPLNESHWSDP-DYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDM 181
               SS++   +    +P +E+    P D        Y  +K  AE+    +    G+++
Sbjct: 108 L---SSVKVNGEGTVGAPFDETDPPAPQDA-------YGRSKLEAERALLELGASDGMEV 157

Query: 182 VVVNPSFVVGP-------LLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHI 234
           V++ P  V GP        L       L L    VK  R          V +D++V A  
Sbjct: 158 VILRPPMVYGPGVRGNFARLMRLIDRGLPLPPGAVKNRR--------SLVSLDNLVDAIY 209

Query: 235 LAMEETRASGR 245
           L +   +A+  
Sbjct: 210 LCISLPKAANG 220

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs

 Score = 57.7 bits (140), Expect = 1e-09
 Identities = 62/335 (18%), Positives = 108/335 (32%), Gaps = 89/335 (26%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTT---VRDPEDLSKVGFLWELNGAEERLKIMKADLL 62
           +TG TGF+   L++ LL     +      +R      K G       AEERL+ +  D L
Sbjct: 5   ITGATGFLGKVLLEKLLRSCPDIGKIYLLIR-----GKSGQS-----AEERLRELLKDKL 54

Query: 63  MEG------SFDEAIQGVDG-----------------------VFHTASPVLVPYDNNIQ 93
            +        F+  I  ++G                       + H A+   V +D  + 
Sbjct: 55  FDRGRNLNPLFESKIVPIEGDLSEPNLGLSDEDLQTLIEEVNIIIHCAA--TVTFDERLD 112

Query: 94  ATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS---SCSSIRY------------RHDAQQV 138
              +   + GTL +L   K+ K +K  V  S        +                   +
Sbjct: 113 EA-LSINVLGTLRLLELAKRCKKLKAFVHVSTAYVNGDRQLIEEKVYPPPADPEKLIDIL 171

Query: 139 SPLNESHWSDPDYCKHYNLW---YAYAKTIAEKEAWRIAKDCG-IDMVVVNPSFVVGPLL 194
             +++                  Y + K +AE+    + K+ G + +V+V PS V   L 
Sbjct: 172 ELMDDLELERATPKLLGG-HPNTYTFTKALAERL---VLKERGNLPLVIVRPSIVGATLK 227

Query: 195 APQP-------TSTLLLILA---MVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRASG 244
            P P           L +     +++ +  + PN     + +D V  A +LA        
Sbjct: 228 EPFPGWIDNFNGPDGLFLAYGKGILRTMNAD-PNAVADIIPVDVVANA-LLAAAAYSGVR 285

Query: 245 RL-------ICSSSVA--HWSPIIEMLKATYPSYP 270
           +          SS V    W    E++       P
Sbjct: 286 KPRELEVYHCGSSDVNPFTWGEAEELINQYLKKNP 320

SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320

>gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

 Score = 55.5 bits (134), Expect = 8e-09
 Identities = 52/207 (25%), Positives = 86/207 (41%), Gaps = 31/207 (14%)

Query: 6   VTGGTGFIAAHLVKALLDKGHM-VRTTVR---DPEDLSKVGFLWELNG-----AEERLKI 56
           +TG TGF+ A+L+  LLD+    V   VR   D   L+++   ++L       + +R+++
Sbjct: 5   LTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEV 64

Query: 57  MKADL------LMEGSFDEAIQGVDGVFHTASPV--LVPYDNNIQATLIDPCIKGTLNVL 108
           +  DL      L E ++ E  + VD + H A+ V  + PY       L    + GT  VL
Sbjct: 65  VAGDLAEPDLGLSERTWQELAENVDLIIHNAALVNHVFPYS-----ELRGANVLGTAEVL 119

Query: 109 SSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLW---YAYAKTI 165
                 K  K +   SS S     + +      +E     P            Y  +K +
Sbjct: 120 RLAATGK-PKPLHYVSSISVGETEYYSNFTVDFDE---ISPTR-NVGQGLAGGYGRSKWV 174

Query: 166 AEKEAWRIAKDCGIDMVVVNPSFVVGP 192
           AEK   R A D G+ + +  P ++ G 
Sbjct: 175 AEKLV-REAGDRGLPVTIFRPGYITGD 200

Length = 382

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 54.2 bits (131), Expect = 1e-08
 Identities = 36/121 (29%), Positives = 51/121 (42%), Gaps = 19/121 (15%)

Query: 6   VTGGTGFIAAHLVKALL-DKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
           V G TG     +V+ALL D G  VR   RDP   S         G E    +++ DL   
Sbjct: 3   VFGATGKQGGSVVRALLKDPGFKVRALTRDPS--SPAAKALAAPGVE----VVQGDLDDP 56

Query: 65  GSFDEAIQGVDGVFHTASPVLVPYDNNI-QATLIDPCIKGTLNVLSSCKKAKSVKRVVLT 123
            S + A++GV GVF          ++ I Q            NV+ + K+A  V+  V +
Sbjct: 57  ESLEAALKGVYGVFLVTDFWEAGGEDEIAQGK----------NVVDAAKRAG-VQHFVFS 105

Query: 124 S 124
           S
Sbjct: 106 S 106

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs

 Score = 52.6 bits (127), Expect = 3e-08
 Identities = 41/187 (21%), Positives = 71/187 (37%), Gaps = 29/187 (15%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           + G TG   + +V+  L +GH V   VRDP  L             E+LK+++ D+L   
Sbjct: 4   IIGATGRTGSAIVREALARGHEVTALVRDPAKLPAEH---------EKLKVVQGDVLDLE 54

Query: 66  SFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSS 125
              EA++G D V            N++  T      +GT N++S+ K A   + +V    
Sbjct: 55  DVKEALEGQDAVISALGT-----RNDLSPT--TLHSEGTRNIVSAMKAAGVKRLIV---- 103

Query: 126 CSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVN 185
                   D  +V+ +        D           A+  A     ++ ++ G+D   V 
Sbjct: 104 VGGAGSLDDRPKVTLVL-------DTLLFPPALRRVAEDHARML--KVLRESGLDWTAVR 154

Query: 186 PSFVVGP 192
           P  +   
Sbjct: 155 PPALFDG 161

Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207

>gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain

 Score = 53.2 bits (128), Expect = 5e-08
 Identities = 55/251 (21%), Positives = 95/251 (37%), Gaps = 37/251 (14%)

Query: 6   VTGGTGFIAAHLVKALLDKGH------MVRTTVRDP-----EDLSKVGFLWELNGAEERL 54
           +TG TGF+ A+L++ LL +        +VR    +       +  +   LW  + A ER+
Sbjct: 4   LTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWHEDLARERI 63

Query: 55  KIMKADL------LMEGSFDEAIQGVDGVFHTASPV--LVPYDNNIQATLIDPCIKGTLN 106
           +++  DL      L +  ++   + VD + H  + V  + PY       L    + GT  
Sbjct: 64  EVVAGDLSEPRLGLSDAEWERLAENVDTIVHNGALVNWVYPYS-----ELRGANVLGTRE 118

Query: 107 VLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLW-YAYAKTI 165
           VL     +   K +   S+ S          +S + E                YA +K +
Sbjct: 119 VLRLA-ASGRAKPLHYVSTISVGAAID----LSTVTED--DATVTPPPGLAGGYAQSKWV 171

Query: 166 AEKEAWRIAKDCGIDMVVVNPSFVVGPLL--APQPTSTLLLILAMVKGLRG--EYPNTTV 221
           AE    R A D G+ + +V P  ++G     A   +  L  ++     L    + P  T 
Sbjct: 172 AELLV-REASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPQSPELTE 230

Query: 222 GFVHIDDVVGA 232
               +D V  A
Sbjct: 231 DLTPVDFVARA 241

This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367

>gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8

 Score = 52.2 bits (126), Expect = 9e-08
 Identities = 59/243 (24%), Positives = 96/243 (39%), Gaps = 57/243 (23%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           +TGGTGFI   L + L   GH V    R P              AE   +++  D L  G
Sbjct: 4   ITGGTGFIGRALTRRLTAAGHEVVVLSRRP------------GKAEGLAEVITWDGLSLG 51

Query: 66  SFDEAIQGVDGVFHTA-SPVL-VPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLT 123
                + G D V + A  P+    +    +  ++   I+ T  ++ +   A +  +V+++
Sbjct: 52  --PWELPGADAVINLAGEPIACRRWTEANKKEILSSRIESTRVLVEAIANAPAPPKVLIS 109

Query: 124 SSCSSIRYRHDAQQVSPLNESHWSDPDY----CKHYNLWYAYAKTIAEKEAWRIAKDCGI 179
           +S     Y H   +V  L E+  S  D+    CK    W        EK A + A + G 
Sbjct: 110 ASAVGY-YGHSGDEV--LTENSPSGKDFLAEVCK---AW--------EKAA-QPASELGT 154

Query: 180 DMVVVNPSFVVGP---LLAPQPTSTLLLILAMVKGLRGEYPNTTVG-------FVHIDDV 229
            +V++    V+GP    L         ++L    GL G      +G       ++HIDD+
Sbjct: 155 RVVILRTGVVLGPDGGALPK-------MLLPFRLGLGG-----PLGSGRQWMSWIHIDDL 202

Query: 230 VGA 232
           V  
Sbjct: 203 VRL 205

This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296

>gnl|CDD|187570 cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs

 Score = 51.4 bits (124), Expect = 2e-07
 Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 3/122 (2%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           +TG TG   ++L + LL+KG+ V   VR     +       L   ++R+ +   DL    
Sbjct: 4   ITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTDRIDH-LYINKDRITLHYGDLTDSS 62

Query: 66  SFDEAIQGV--DGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLT 123
           S   AI+ V  D ++H A+   V    +      +    GTLN+L + +      R    
Sbjct: 63  SLRRAIEKVRPDEIYHLAAQSHVKVSFDDPEYTAEVNAVGTLNLLEAIRILGLDARFYQA 122

Query: 124 SS 125
           SS
Sbjct: 123 SS 124

GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187563 cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs

 Score = 50.4 bits (121), Expect = 3e-07
 Identities = 42/131 (32%), Positives = 55/131 (41%), Gaps = 11/131 (8%)

Query: 4   YCVTGGTGFIAAHLVKALLDKGHMV--RTTVRDPEDLS-KVGFLWELNGAEERLKIMKAD 60
             VTG  GFI  H+ K LL++G  V     + D  D+  K   L  L G     K +K D
Sbjct: 3   ILVTGAAGFIGFHVAKRLLERGDEVVGIDNLNDYYDVRLKEARLELL-GKSGGFKFVKGD 61

Query: 61  L----LMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKS 116
           L     +   F +     D V H A+   V Y        +D  I G LN+L  C+    
Sbjct: 62  LEDREALRRLFKDH--EFDAVIHLAAQAGVRYSLENPHAYVDSNIVGFLNLLELCRHFG- 118

Query: 117 VKRVVLTSSCS 127
           VK +V  SS S
Sbjct: 119 VKHLVYASSSS 129

This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 332

>gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs

 Score = 49.2 bits (118), Expect = 6e-07
 Identities = 41/149 (27%), Positives = 56/149 (37%), Gaps = 26/149 (17%)

Query: 4   YCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLM 63
             VTG TG I + +   LL+ G  VR  VR  E  +         GAE    ++  DL  
Sbjct: 1   ILVTGATGRIGSKVATTLLEAGRPVRALVRSDERAAA----LAARGAE----VVVGDLDD 52

Query: 64  EGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLT 123
                 A+ GVD VF  A P       + +   +           +S  +   VKRVV  
Sbjct: 53  PAVLAAALAGVDAVFFLAPPA---PTADARPGYVQ-----AAEAFASALREAGVKRVVNL 104

Query: 124 SSCSS--------IRYRHDAQQVSPLNES 144
           SS  +        IR     +QV  LN +
Sbjct: 105 SSVGADPESPSGLIRGHWLMEQV--LNWA 131

Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259

>gnl|CDD|187541 cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs

 Score = 49.2 bits (118), Expect = 8e-07
 Identities = 42/149 (28%), Positives = 65/149 (43%), Gaps = 30/149 (20%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRD------PEDLSKVGFLWELNGAEERLKIMKA 59
           +TGG GF+ +HL   LL+ GH V     D        ++                + ++ 
Sbjct: 5   ITGGAGFLGSHLCDRLLEDGHEV--ICVDNFFTGRKRNIEH----LI---GHPNFEFIRH 55

Query: 60  DLLMEGSFDEAIQGVDGVFHTASPVL-VPYDNN-IQATLIDPCIKGTLNVLSSCKKAKSV 117
           D + E  + E    VD ++H A P   V Y  N I+   +   + GTLN+L   K+  + 
Sbjct: 56  D-VTEPLYLE----VDQIYHLACPASPVHYQYNPIKT--LKTNVLGTLNMLGLAKRVGA- 107

Query: 118 KRVVLTSSCSSIRYRHDAQQVSPLNESHW 146
            RV+L S  +S  Y     +V P  ES+W
Sbjct: 108 -RVLLAS--TSEVYGD--PEVHPQPESYW 131

UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3

 Score = 47.7 bits (114), Expect = 3e-06
 Identities = 51/247 (20%), Positives = 87/247 (35%), Gaps = 43/247 (17%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           V G +G I   + + L  +G  VR   R    L+ +            ++I+ AD +   
Sbjct: 4   VLGASGPIGREVARELRRRGWDVRLVSRSGSKLAWL----------PGVEIVAADAMDAS 53

Query: 66  SFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSS 125
           S   A +G D ++H A+P    Y       L  P ++   NV+++ +      ++VL  +
Sbjct: 54  SVIAAARGADVIYHCANP---AYTR--WEELFPPLME---NVVAAAEAN--GAKLVLPGN 103

Query: 126 CSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVN 185
                Y +  Q  SP+ E     P   K         +   E+          I  ++V 
Sbjct: 104 V----YMYGPQAGSPITEDTPFQPTTRK------GRIRAEMEERLLAAHAKGDIRALIVR 153

Query: 186 PSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG-------FVHIDDVVGAHILAME 238
                GP           L  A+   L+G+      G       + ++ DV  A +   E
Sbjct: 154 APDFYGPG-----AINSWLGAALFAILQGK-TAVFPGNLDTPHEWTYLPDVARALVTLAE 207

Query: 239 ETRASGR 245
           E  A G 
Sbjct: 208 EPDAFGE 214

These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302

>gnl|CDD|187562 cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 47.3 bits (113), Expect = 4e-06
 Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 5/122 (4%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           VTG TGF  + L   L + G  V     DP        L+EL   + ++   + D+    
Sbjct: 9   VTGHTGFKGSWLSLWLQELGAKVIGYSLDPPTNPN---LFELANLDNKISSTRGDIRDLN 65

Query: 66  SFDEAIQGV--DGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLT 123
           +  EAI+    + VFH A+  LV           +  + GT+N+L + ++  SVK VV  
Sbjct: 66  ALREAIREYEPEIVFHLAAQPLVRLSYKDPVETFETNVMGTVNLLEAIRETGSVKAVVNV 125

Query: 124 SS 125
           +S
Sbjct: 126 TS 127

This subgroup contains CDP-D-glucose 4,6-dehydratase, an extended SDR, which catalyzes the conversion of CDP-D-glucose to CDP-4-keto-6-deoxy-D-glucose. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 336

>gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein

 Score = 46.9 bits (112), Expect = 4e-06
 Identities = 53/248 (21%), Positives = 95/248 (38%), Gaps = 42/248 (16%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           +TGGTGFI   L + L  +GH V    R P   +   +      A E             
Sbjct: 3   ITGGTGFIGRALTQRLTKRGHEVTILTRSPPPGANTKWEGYKPWAGE------------- 49

Query: 66  SFDEAIQGVDGVFHTA-SPVLV-PYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLT 123
              ++++G D V + A  P+    +    +  + D  I  T  ++ +   A+   +V ++
Sbjct: 50  -DADSLEGADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRLLVEAIAAAEQKPKVFIS 108

Query: 124 SSCSSIRYRHDAQQVSPLNESHWSDPD-----YCKHYNLWYAYAKTIAEKEAWRIAKDCG 178
           +S     Y     +     E      D      C+    W        E+ A + A+D G
Sbjct: 109 ASAVGY-YGPSEDR--EYTEEDSPAGDDFLAELCR---DW--------EEAA-QAAEDLG 153

Query: 179 IDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTT--VGFVHIDDVVGAHILA 236
             +V++      G +L P+  +   ++L    GL G   +      ++HI+D+V   + A
Sbjct: 154 TRVVLLR----TGIVLGPKGGALAKMLLPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFA 209

Query: 237 MEETRASG 244
           +E    SG
Sbjct: 210 LENASVSG 217

This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 46.5 bits (111), Expect = 6e-06
 Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 4/73 (5%)

Query: 5  CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
           V G TGFI  ++V  L  +G  V    R      ++  + +L      +  ++ DL  +
Sbjct: 4  TVFGATGFIGRYVVNRLAKRGSQVIVPYRCEAYARRLLVMGDLGQ----VLFVEFDLRDD 59

Query: 65 GSFDEAIQGVDGV 77
           S  +A++G D V
Sbjct: 60 ESIRKALEGSDVV 72

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|177883 PLN02240, PLN02240, UDP-glucose 4-epimerase

 Score = 46.5 bits (111), Expect = 8e-06
 Identities = 41/139 (29%), Positives = 58/139 (41%), Gaps = 33/139 (23%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRD------PEDLSKVGFLWELNGAE-ERLKIMK 58
           VTGG G+I +H V  LL  G+  +  V D       E L +V    EL G   + L   K
Sbjct: 10  VTGGAGYIGSHTVLQLLLAGY--KVVVIDNLDNSSEEALRRVK---ELAGDLGDNLVFHK 64

Query: 59  ADLLMEGSFDE--AIQGVDGVFHTA------SPVLVP---YDNNIQATLIDPCIKGTLNV 107
            DL  + + ++  A    D V H A        V  P   YDNN+  T+        L V
Sbjct: 65  VDLRDKEALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTIN------LLEV 118

Query: 108 LSSCKKAKSVKRVVLTSSC 126
           ++        K++V +SS 
Sbjct: 119 MA----KHGCKKLVFSSSA 133

Length = 352

>gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 46.0 bits (110), Expect = 9e-06
 Identities = 31/124 (25%), Positives = 50/124 (40%), Gaps = 20/124 (16%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRD-------PEDLSKVGFLWELNGAEERLKIMK 58
           VTGG GFI ++ V+ LL+K    +    D        E+L  V        +  R + +K
Sbjct: 5   VTGGAGFIGSNFVRYLLNKYPDYKIINLDKLTYAGNLENLEDV-------SSSPRYRFVK 57

Query: 59  ADLLMEGSFDEAIQ--GVDGVFHTASPVLVPYDNNIQATL--IDPCIKGTLNVLSSCKKA 114
            D+      D   +   +D V H A+   V  D +I      I   + GT  +L + +K 
Sbjct: 58  GDICDAELVDRLFEEEKIDAVIHFAAESHV--DRSISDPEPFIRTNVLGTYTLLEAARKY 115

Query: 115 KSVK 118
              +
Sbjct: 116 GVKR 119

This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score = 45.0 bits (107), Expect = 1e-05
 Identities = 55/255 (21%), Positives = 83/255 (32%), Gaps = 59/255 (23%)

Query: 5   CVTGGTGFIAAHLVKALLDKGHMVRTTV-----RDPEDLSKVGFL-WELNGAEERLKIMK 58
            + GGT FI   LV+ LL  GH V  TV       P+    V  +  + N  +       
Sbjct: 4   LIIGGTRFIGKALVEELLAAGHDV--TVFNRGRTKPDLPEGVEHIVGDRNDRDA-----L 56

Query: 59  ADLLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVK 118
            +LL    FD  +  VD + +T   V            +D   KG             VK
Sbjct: 57  EELLGGEDFD-VV--VDTIAYTPRQV---------ERALDAF-KGR------------VK 91

Query: 119 RVVLTSSCSSIRYRHDAQQV---SPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAK 175
           + +  SS S   Y    + +   +PL E               Y   K  AE       +
Sbjct: 92  QYIFISSASV--YLKPGRVITESTPLRE----PDAVGLSDPWDYGRGKRAAEDVL---IE 142

Query: 176 DCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYP-----NTTVGFVHIDDVV 230
                  +V P ++ GP       +     LA               ++ V F+H+ D+ 
Sbjct: 143 AAAFPYTIVRPPYIYGPGDYTGRLAYFFDRLA----RGRPILVPGDGHSLVQFIHVKDLA 198

Query: 231 GAHILAMEETRASGR 245
            A + A    +A G 
Sbjct: 199 RALLGAAGNPKAIGG 213

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|187651 cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptional regulator), HSCARG (an NADPH sensor), and triphenylmethane reductase (TMR) like proteins, atypical (a) SDRs

 Score = 44.8 bits (106), Expect = 2e-05
 Identities = 21/82 (25%), Positives = 30/82 (36%), Gaps = 9/82 (10%)

Query: 4  YCVTGGTGFIAAHLVKALLDKG-HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLL 62
            VTG TG     +++ LL KG   VR  VR+ E  +         G E    + + D  
Sbjct: 1  IAVTGATGQQGGSVIRHLLAKGASQVRAVVRNVEKAA----TLADQGVE----VRQGDYN 52

Query: 63 MEGSFDEAIQGVDGVFHTASPV 84
                +A  G   +F    P 
Sbjct: 53 QPELLQKAFAGASKLFIITGPH 74

Atypical SDRs belonging to this subgroup include NmrA, HSCARG, and TMR, these proteins bind NAD(P) but they lack the usual catalytic residues of the SDRs. Atypical SDRs are distinct from classical SDRs. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. TMR, an NADP-binding protein, lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 224

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 22/79 (27%), Positives = 30/79 (37%), Gaps = 14/79 (17%)

Query: 6  VTGGTGFIAAHLVKALLDKGHMVRTTVRDP---EDLSKVGFLWELNGAEERLKIMKADLL 62
          VTG TGFI + +V+ L+  GH V    R       L   G            ++ + DL 
Sbjct: 5  VTGATGFIGSAVVRELVAAGHEVVGLARSDAGAAKLEAAG-----------AQVHRGDLE 53

Query: 63 MEGSFDEAIQGVDGVFHTA 81
                +A    D V H A
Sbjct: 54 DLDILRKAAAEADAVIHLA 72

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs

 Score = 44.5 bits (106), Expect = 3e-05
 Identities = 48/194 (24%), Positives = 73/194 (37%), Gaps = 39/194 (20%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           VTG  G + + +V+ L  +G+      R  ++L                     DL  + 
Sbjct: 4   VTGHRGLVGSAIVRVLARRGY-ENVVFRTSKEL---------------------DLTDQE 41

Query: 66  SFDEAI--QGVDGVFHTASPVLVPYDNNI-QATLIDPCIKGTLNVLSSCKKAKSVKRVVL 122
           +       +  D V H A+ V     N    A  +   +    NV+ +  +    K V L
Sbjct: 42  AVRAFFEKEKPDYVIHLAAKVGGIVANMTYPADFLRDNLLINDNVIHAAHRFGVKKLVFL 101

Query: 123 TSSCSSIRYRHDAQQVSPLNES--HWSDPDYCKHYNLWYAYAK--TIAEKEAWRIAKDCG 178
            SSC    Y   A Q  P++ES      P+     N  YA AK   +   EA+R  K  G
Sbjct: 102 GSSCI---YPDLAPQ--PIDESDLLTGPPEPT---NEGYAIAKRAGLKLCEAYR--KQYG 151

Query: 179 IDMVVVNPSFVVGP 192
            D + V P+ + GP
Sbjct: 152 CDYISVMPTNLYGP 165

GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|177093 CHL00194, ycf39, Ycf39; Provisional

 Score = 44.6 bits (106), Expect = 3e-05
 Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 14/128 (10%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           V G TG +   +V+  LD+G+ VR  VR   +L K  FL E  GAE    ++  DL +  
Sbjct: 5   VIGATGTLGRQIVRQALDEGYQVRCLVR---NLRKASFLKEW-GAE----LVYGDLSLPE 56

Query: 66  SFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSS 125
           +   + +GV  +   +     P D    A  ID    G L ++ + K AK +KR +  S 
Sbjct: 57  TLPPSFKGVTAIIDAS--TSRPSDLY-NAKQID--WDGKLALIEAAKAAK-IKRFIFFSI 110

Query: 126 CSSIRYRH 133
            ++ +Y +
Sbjct: 111 LNAEQYPY 118

Length = 317

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 42.1 bits (100), Expect = 8e-05
 Identities = 32/142 (22%), Positives = 53/142 (37%), Gaps = 20/142 (14%)

Query: 4   YCVTGGTGFIAAHLVKALLDKG--HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADL 61
           Y VTGG G +   L + L ++G  H+V  +     D      L EL      + ++  D+
Sbjct: 3   YLVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALLAELEARGAEVTVVACDV 62

Query: 62  ----LMEGSFDEAIQ---GVDGVFHTASPVLVPYDNNIQ-------ATLIDPCIKGTLNV 107
                +     E       + GV H A    V  D  +        A ++ P + G  N 
Sbjct: 63  SDRDAVRALLAEIRADGPPLRGVIHAA---GVLRDALLANMTAEDFARVLAPKVTGAWN- 118

Query: 108 LSSCKKAKSVKRVVLTSSCSSI 129
           L    + + +   VL SS + +
Sbjct: 119 LHEATRDRPLDFFVLFSSIAGV 140

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|187660 cd08957, WbmH_like_SDR_e, Bordetella bronchiseptica enzymes WbmH and WbmG-like, extended (e) SDRs

 Score = 42.9 bits (101), Expect = 1e-04
 Identities = 64/253 (25%), Positives = 101/253 (39%), Gaps = 30/253 (11%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           +TGG G I +HL++ LL++GH V   V D     +   L +       L +++  +  + 
Sbjct: 5   ITGGAGQIGSHLIEHLLERGHQV--VVIDNFATGRREHLPDHPN----LTVVEGSIADKA 58

Query: 66  SFDEAIQGV--DGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVL- 122
             D+       D V HTA+    P D+  + TL +  + G  NV+ + KKA  VKR++  
Sbjct: 59  LVDKLFGDFKPDAVVHTAAAYKDP-DDWYEDTLTN-VV-GGANVVQAAKKA-GVKRLIYF 114

Query: 123 -TSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDM 181
            T+ C  ++         P+   H   P         YA +KT  E       +  G+D 
Sbjct: 115 QTALCYGLK-----PMQQPIRLDHPRAPPGSS-----YAISKTAGEY----YLELSGVDF 160

Query: 182 VVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETR 241
           V    + V GP     P  T    L    G +    +T   FV + D+      A++  R
Sbjct: 161 VTFRLANVTGPRNVIGPLPTFYQRLK--AGKKCFVTDTRRDFVFVKDLARVVDKALDGIR 218

Query: 242 ASGRLICSSSVAH 254
             G    SS    
Sbjct: 219 GHGAYHFSSGEDV 231

Bordetella bronchiseptica enzymes WbmH and WbmG, and related proteins. This subgroup exhibits the active site tetrad and NAD-binding motif of the extended SDR family. It has been proposed that the active site in Bordetella WbmG and WbmH cannot function as an epimerase, and that it plays a role in O-antigen synthesis pathway from UDP-2,3-diacetamido-2,3-dideoxy-l-galacturonic acid. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 307

>gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 51/209 (24%), Positives = 88/209 (42%), Gaps = 36/209 (17%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTT--VR--DPE-------DLSKVGFLWELNGAE-ER 53
           +TG TGF+ A+L++ LL + ++ +    VR  D E       D  K   L   +  E  R
Sbjct: 4   LTGATGFLGAYLLRELLKRKNVSKIYCLVRAKDEEAALERLIDNLKEYGLNLWDELELSR 63

Query: 54  LKIMKADL------LMEGSFDEAIQGVDGVFHTASPV--LVPYDNNIQATLIDPCIKGTL 105
           +K++  DL      L +  + E  + VD + H  + V  + PY+      L    + GT 
Sbjct: 64  IKVVVGDLSKPNLGLSDDDYQELAEEVDVIIHNGANVNWVYPYE-----ELKPANVLGTK 118

Query: 106 NVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLW---YAYA 162
            +L      K  K +   S+ S       A++ + L++    D       N     Y  +
Sbjct: 119 ELLKLAATGKL-KPLHFVSTLSVF----SAEEYNALDDEESDDMLE--SQNGLPNGYIQS 171

Query: 163 KTIAEKEAWRIAKDCGIDMVVVNPSFVVG 191
           K +AEK   R A + G+ + ++ P  + G
Sbjct: 172 KWVAEKLL-REAANRGLPVAIIRPGNIFG 199

This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290

>gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 29/127 (22%), Positives = 54/127 (42%), Gaps = 13/127 (10%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGA-------EERLKIMK 58
           +TGG GFI ++L +  L +G  V     D  +L + G     N A       +  ++ + 
Sbjct: 5   ITGGAGFIGSNLARFFLKQGWEV--IGFD--NLMRRGS--FGNLAWLKANREDGGVRFVH 58

Query: 59  ADLLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVK 118
            D+      ++  + +D + HTA+   V    +      +    GTLNVL + ++     
Sbjct: 59  GDIRNRNDLEDLFEDIDLIIHTAAQPSVTTSASSPRLDFETNALGTLNVLEAARQHAPNA 118

Query: 119 RVVLTSS 125
             + TS+
Sbjct: 119 PFIFTST 125

CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 9/86 (10%)

Query: 6  VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
          +TG +  I   L  AL  +G+ V  T R+P+ L  +G L   N     L++++ D+  E 
Sbjct: 5  ITGCSSGIGLALALALAAQGYRVIATARNPDKLESLGELLNDN-----LEVLELDVTDEE 59

Query: 66 SFDEAIQGVDGVFHTASPVLVPYDNN 91
          S   A++ V   F     VLV   NN
Sbjct: 60 SIKAAVKEVIERFGRID-VLV---NN 81

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 36/151 (23%), Positives = 53/151 (35%), Gaps = 36/151 (23%)

Query: 4   YCVTGGTGFIAAHLVKALLDKGHMVRTTVR----------DPEDLSKVGFLWELNGAEER 53
           Y VTGG G I   L +       + R               PE+  K   L  L     R
Sbjct: 208 YLVTGGAGGIGRALAR------ALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGAR 261

Query: 54  LKIMKADLLMEGSFDEAIQGV-------DGVFHTASPVLVPYDNNI--------QATLID 98
           +  + AD+    +    ++ V       DGV H A    V  D  +        +A L  
Sbjct: 262 VLYISADVTDAAAVRRLLEKVRERYGAIDGVIHAA---GVLRDALLAQKTAEDFEAVL-A 317

Query: 99  PCIKGTLNVLSSCKKAKSVKRVVLTSSCSSI 129
           P + G LN+  +    + +   VL SS S+ 
Sbjct: 318 PKVDGLLNLAQALAD-EPLDFFVLFSSVSAF 347

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|234212 TIGR03443, alpha_am_amid, L-aminoadipate-semialdehyde dehydrogenase

 Score = 41.6 bits (98), Expect = 4e-04
 Identities = 66/257 (25%), Positives = 108/257 (42%), Gaps = 43/257 (16%)

Query: 6    VTGGTGFIAAHLVKALLDKGHMVRTTV------RDPED----LSKVGF---LWELNGAEE 52
            +TG TGF+ + +++ LL +       V      +  E     L K G    +W+   A  
Sbjct: 976  LTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWA-S 1034

Query: 53   RLKIMKADL------LMEGSFDEAIQGVDGVFHTASPV--LVPYDNNIQATLIDPCIKGT 104
            R++++  DL      L +  + +    VD + H  + V  + PY     + L D  + GT
Sbjct: 1035 RIEVVLGDLSKEKFGLSDEKWSDLTNEVDVIIHNGALVHWVYPY-----SKLRDANVIGT 1089

Query: 105  LNVLSSCK--KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPD----YCKHYNLW 158
            +NVL+ C   KAK    V  TS+  +  Y + + ++     +   + D      K     
Sbjct: 1090 INVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTG 1149

Query: 159  YAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQ--PTSTLLLILAMVKGL--RG 214
            Y  +K +AE    R A   G+   +V P +V G     +   T+T   +L M+KG    G
Sbjct: 1150 YGQSKWVAEY-IIREAGKRGLRGCIVRPGYVTG---DSKTGATNTDDFLLRMLKGCIQLG 1205

Query: 215  EYPN--TTVGFVHIDDV 229
              PN   TV  V +D V
Sbjct: 1206 LIPNINNTVNMVPVDHV 1222

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. Length = 1389

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 39.1 bits (92), Expect = 8e-04
 Identities = 29/141 (20%), Positives = 51/141 (36%), Gaps = 17/141 (12%)

Query: 4   YCVTGGTGFIAAHLVKALLDKG--HMVRTTVRDP-EDLSKVGFLWELNGAEERLKIMKAD 60
             +TGGTG +   L + L  +G  H+V  + R P    +++  + EL      + +   D
Sbjct: 3   VLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAEL--VAELEALGAEVTVAACD 60

Query: 61  LL----MEGSFDEAIQG---VDGVFHTA----SPVLVPYDNNIQATLIDPCIKGTLNVLS 109
           +     +             +DGV H A       L          ++ P + G  N L 
Sbjct: 61  VADRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEELTPERFERVLAPKVTGAWN-LH 119

Query: 110 SCKKAKSVKRVVLTSSCSSIR 130
              +   +   VL SS + + 
Sbjct: 120 ELTRDLDLGAFVLFSSVAGVL 140

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|215072 PLN00141, PLN00141, Tic62-NAD(P)-related group II protein; Provisional

 Score = 39.5 bits (92), Expect = 0.001
 Identities = 41/130 (31%), Positives = 60/130 (46%), Gaps = 29/130 (22%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           V G TG     +V+ LL KG  V+  VRD +  +K     + +     L+I++AD + EG
Sbjct: 22  VAGATGRTGKRIVEQLLAKGFAVKAGVRDVDK-AKTSLPQDPS-----LQIVRAD-VTEG 74

Query: 66  S--FDEAI-QGVDGV-----FHTASPVLVPY--DNNIQATLIDPCIKGTLNVLSSCKKAK 115
           S    EAI    D V     F  +     P+  DN            GT+N++ +C+KA 
Sbjct: 75  SDKLVEAIGDDSDAVICATGFRRSFDPFAPWKVDN-----------FGTVNLVEACRKA- 122

Query: 116 SVKRVVLTSS 125
            V R +L SS
Sbjct: 123 GVTRFILVSS 132

Length = 251

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 39.0 bits (92), Expect = 0.001
 Identities = 30/142 (21%), Positives = 52/142 (36%), Gaps = 20/142 (14%)

Query: 4   YCVTGGTGFIAAHLVKALLDKG--HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADL 61
           Y +TGG G +   L + L ++G   +V  +   P+       L EL  A  R+ ++  D+
Sbjct: 3   YLITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAGARVTVVACDV 62

Query: 62  LMEGSFDEAIQG-------VDGVFHTASPVLVPYDNNIQ-------ATLIDPCIKGTLNV 107
               +    +         + GV H A    V  D  +        A ++ P   G  N+
Sbjct: 63  ADRDALAAVLAAIPAVEGPLTGVIHAA---GVLDDGVLASLTPERFAAVLAPKAAGAWNL 119

Query: 108 LSSCKKAKSVKRVVLTSSCSSI 129
                    +   VL SS + +
Sbjct: 120 HELTADLP-LDFFVLFSSIAGV 140

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs

 Score = 39.3 bits (92), Expect = 0.002
 Identities = 28/141 (19%), Positives = 52/141 (36%), Gaps = 20/141 (14%)

Query: 4   YCVTGGTGFIAAHLVKALLDKG--HMVRT--TVRDPEDLSKVGFLWELNGAEERLKIMKA 59
           Y +TGG G +   + + L  +G  H+V        P   ++   L    GA  R+ +++ 
Sbjct: 153 YLITGGLGGLGLLVARWLAARGARHLVLLSRRGPAPRAAARAA-LLRAGGA--RVSVVRC 209

Query: 60  DLLMEGSFDEAI------QGVDGVFHTA-----SPVLVPYDNNIQATLIDPCIKGTLNVL 108
           D+    +    +        + GV H A     + +         A L    + G LN+ 
Sbjct: 210 DVTDPAALAALLAELAAGGPLAGVIHAAGVLRDALLAELTPAAFAAVL-AAKVAGALNLH 268

Query: 109 SSCKKAKSVKRVVLTSSCSSI 129
                   +   VL SS +++
Sbjct: 269 ELTPDL-PLDFFVLFSSVAAL 288

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 13/83 (15%)

Query: 6  VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADL---L 62
          VTG +  I   + +AL   G+ V   +R+PEDL+       L+ +   ++ +  D     
Sbjct: 5  VTGASRGIGIEIARALARDGYRVSLGLRNPEDLA------ALSASGGDVEAVPYDARDPE 58

Query: 63 MEGSFDEAI----QGVDGVFHTA 81
             +  +A+      +D + H A
Sbjct: 59 DARALVDALRDRFGRIDVLVHNA 81

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|225462 COG2910, COG2910, Putative NADH-flavin reductase [General function prediction only]

 Score = 38.1 bits (89), Expect = 0.003
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 10/73 (13%)

Query: 6  VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
          + G +G   + ++K  L +GH V   VR+   L+          A + + I++ D+    
Sbjct: 5  IIGASGKAGSRILKEALKRGHEVTAIVRNASKLA----------ARQGVTILQKDIFDLT 54

Query: 66 SFDEAIQGVDGVF 78
          S    + G D V 
Sbjct: 55 SLASDLAGHDAVI 67

Length = 211

>gnl|CDD|224015 COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

 Score = 38.4 bits (90), Expect = 0.003
 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 4/45 (8%)

Query: 6  VTGGTGFIAAHLVKALLDKGHMVRTTVRDP----EDLSKVGFLWE 46
          +TGGTG I   L   L   GH V    R P    ++L     LWE
Sbjct: 3  ITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHPNVTLWE 47

Length = 297

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 38.8 bits (91), Expect = 0.003
 Identities = 30/91 (32%), Positives = 38/91 (41%), Gaps = 21/91 (23%)

Query: 4  YCVTGGTGFIAAHLVKALL--DKGHMVRTTVRDPEDLSKVGFLWE---------LNG--A 50
          Y VTGGTGFI   LV  LL   +   V   VR  + LS++  L           L G   
Sbjct: 3  YFVTGGTGFIGRRLVSRLLDRRREATVHVLVR-RQSLSRLEALAAYWGADRVVPLVGDLT 61

Query: 51 EERLKIMKADLLMEGSFDEAIQGVDGVFHTA 81
          E  L + +AD+   G        +D V H A
Sbjct: 62 EPGLGLSEADIAELGD-------IDHVVHLA 85

Length = 657

>gnl|CDD|187549 cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs

 Score = 38.1 bits (89), Expect = 0.004
 Identities = 31/132 (23%), Positives = 47/132 (35%), Gaps = 31/132 (23%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRD---PEDLSKVGFLWELNGAEERLKIMKADLL 62
           +TG +GF+   L + LL      R  + D   P+                R+  +  DL 
Sbjct: 5   ITGASGFVGQRLAERLLSDVPNERLILIDVVSPKA----------PSGAPRVTQIAGDLA 54

Query: 63  MEGSFDEAIQGV-DGVFHTA--------SPVLVPYDNNIQATLIDPCIKGTLNVLSSCKK 113
           +    +    G  D VFH A        +   + Y  N+          GT N+L + +K
Sbjct: 55  VPALIEALANGRPDVVFHLAAIVSGGAEADFDLGYRVNVD---------GTRNLLEALRK 105

Query: 114 AKSVKRVVLTSS 125
                R V TSS
Sbjct: 106 NGPKPRFVFTSS 117

Nucleoside-diphosphate-sugar 4-epimerase has the characteristic active site tetrad and NAD-binding motif of the extended SDR, and is related to more specifically defined epimerases such as UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), which catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup includes Escherichia coli 055:H7 Gne, a UDP-GlcNAc 4-epimerase, essential for O55 antigen synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|224014 COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

 Score = 38.1 bits (89), Expect = 0.004
 Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 8/109 (7%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPED--LSKVGFLWELNGAEERLKIMKADLLM 63
           +TG TG   ++L + LL+KG+ V    R        ++    + +  + RL +   DL  
Sbjct: 7   ITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTD 66

Query: 64  EGSFDEAIQGV--DGVFHTA--SPVLVPYDNNIQATLIDPCIKGTLNVL 108
             +    ++ V  D +++ A  S V V ++       +D  I GTL +L
Sbjct: 67  SSNLLRILEEVQPDEIYNLAAQSHVGVSFEQPEYTADVD-AI-GTLRLL 113

Length = 345

>gnl|CDD|165812 PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase

 Score = 38.1 bits (88), Expect = 0.004
 Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 16/144 (11%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           VTGG GF+ +HLV  L+ +G  V   V D     +   L  L G   R ++++ D++   
Sbjct: 125 VTGGAGFVGSHLVDKLIGRGDEV--IVIDNFFTGRKENLVHLFG-NPRFELIRHDVV--- 178

Query: 66  SFDEAIQGVDGVFHTASPVL-VPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
             +  +  VD ++H A P   V Y  N   T I   + GTLN+L   K+  +  R +LTS
Sbjct: 179 --EPILLEVDQIYHLACPASPVHYKYNPVKT-IKTNVMGTLNMLGLAKRVGA--RFLLTS 233

Query: 125 SCSSIRYRHDAQQVSPLNESHWSD 148
             +S  Y    +   P  E++W +
Sbjct: 234 --TSEVYGDPLEH--PQKETYWGN 253

Length = 436

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	305
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	100.0
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
PLN02214	342	cinnamoyl-CoA reductase	100.0
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02650	351	dihydroflavonol-4-reductase	100.0
PLN00198	338	anthocyanidin reductase; Provisional	100.0
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	100.0
PLN02427	386	UDP-apiose/xylose synthase	100.0
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	100.0
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	100.0
PLN02166	436	dTDP-glucose 4,6-dehydratase	100.0
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	100.0
PLN02572	442	UDP-sulfoquinovose synthase	100.0
PLN02695	370	GDP-D-mannose-3',5'-epimerase	100.0
PLN02896	353	cinnamyl-alcohol dehydrogenase	100.0
PLN02206	442	UDP-glucuronate decarboxylase	100.0
PLN02686	367	cinnamoyl-CoA reductase	100.0
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	100.0
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	100.0
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	100.0
PLN02653	340	GDP-mannose 4,6-dehydratase	100.0
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	100.0
PLN02583	297	cinnamoyl-CoA reductase	100.0
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	100.0
PLN02260	668	probable rhamnose biosynthetic enzyme	100.0
PLN02240	352	UDP-glucose 4-epimerase	100.0
PRK10675	338	UDP-galactose-4-epimerase; Provisional	100.0
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	100.0
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	100.0
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	100.0
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	100.0
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	100.0
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	100.0
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	100.0
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	100.0
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	100.0
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	100.0
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	100.0
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	100.0
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	100.0
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	100.0
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	100.0
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	100.0
PLN02996	491	fatty acyl-CoA reductase	100.0
PLN00016	378	RNA-binding protein; Provisional	100.0
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	100.0
CHL00194	317	ycf39 Ycf39; Provisional	100.0
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	100.0
PLN02778	298	3,5-epimerase/4-reductase	100.0
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	100.0
PRK05865	854	hypothetical protein; Provisional	100.0
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	100.0
TIGR01746	367	Thioester-redct thioester reductase domain. It has	100.0
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	100.0
PRK07201	657	short chain dehydrogenase; Provisional	99.98
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.97
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.97
PRK12320	699	hypothetical protein; Provisional	99.96
PLN02503	605	fatty acyl-CoA reductase 2	99.96
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.96
PLN02260	668	probable rhamnose biosynthetic enzyme	99.96
PRK06482	276	short chain dehydrogenase; Provisional	99.95
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.95
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.95
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.94
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.94
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.93
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.93
PRK08263	275	short chain dehydrogenase; Provisional	99.93
PRK07074	257	short chain dehydrogenase; Provisional	99.93
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.93
PRK07775	274	short chain dehydrogenase; Provisional	99.92
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.92
PRK06180	277	short chain dehydrogenase; Provisional	99.92
PRK06914	280	short chain dehydrogenase; Provisional	99.92
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.92
PRK05875	276	short chain dehydrogenase; Provisional	99.92
PRK09135	249	pteridine reductase; Provisional	99.92
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.91
PRK06182	273	short chain dehydrogenase; Validated	99.91
PRK06128	300	oxidoreductase; Provisional	99.91
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.91
PRK07774	250	short chain dehydrogenase; Provisional	99.91
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.91
PRK06138	252	short chain dehydrogenase; Provisional	99.91
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.91
PRK12829	264	short chain dehydrogenase; Provisional	99.91
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.91
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.9
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.9
PRK07806	248	short chain dehydrogenase; Provisional	99.9
PRK05876	275	short chain dehydrogenase; Provisional	99.9
PRK12746	254	short chain dehydrogenase; Provisional	99.9
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.9
PLN03209	576	translocon at the inner envelope of chloroplast su	99.9
PRK12827	249	short chain dehydrogenase; Provisional	99.9
PRK07067	257	sorbitol dehydrogenase; Provisional	99.9
PRK07890	258	short chain dehydrogenase; Provisional	99.9
PRK06194	287	hypothetical protein; Provisional	99.9
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.9
PRK06179	270	short chain dehydrogenase; Provisional	99.9
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.9
PRK07060	245	short chain dehydrogenase; Provisional	99.9
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.9
PRK12828	239	short chain dehydrogenase; Provisional	99.9
PRK08219	227	short chain dehydrogenase; Provisional	99.89
PRK08628	258	short chain dehydrogenase; Provisional	99.89
PRK06181	263	short chain dehydrogenase; Provisional	99.89
PRK09186	256	flagellin modification protein A; Provisional	99.89
PRK06701	290	short chain dehydrogenase; Provisional	99.89
PRK07985	294	oxidoreductase; Provisional	99.89
PRK06123	248	short chain dehydrogenase; Provisional	99.89
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.89
PRK05717	255	oxidoreductase; Validated	99.89
PRK07024	257	short chain dehydrogenase; Provisional	99.89
PRK07577	234	short chain dehydrogenase; Provisional	99.89
PRK06500	249	short chain dehydrogenase; Provisional	99.88
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.88
PRK09291	257	short chain dehydrogenase; Provisional	99.88
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.88
PRK05993	277	short chain dehydrogenase; Provisional	99.88
PRK09134	258	short chain dehydrogenase; Provisional	99.88
PRK12939	250	short chain dehydrogenase; Provisional	99.88
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.88
PLN02253	280	xanthoxin dehydrogenase	99.88
PRK06101	240	short chain dehydrogenase; Provisional	99.88
PRK10538	248	malonic semialdehyde reductase; Provisional	99.88
PRK07454	241	short chain dehydrogenase; Provisional	99.88
PRK05650	270	short chain dehydrogenase; Provisional	99.88
PRK08267	260	short chain dehydrogenase; Provisional	99.88
PRK07102	243	short chain dehydrogenase; Provisional	99.88
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.88
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.88
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.87
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.87
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.87
PRK06398	258	aldose dehydrogenase; Validated	99.87
PRK08264	238	short chain dehydrogenase; Validated	99.87
PRK05693	274	short chain dehydrogenase; Provisional	99.87
PRK06523	260	short chain dehydrogenase; Provisional	99.87
PRK07063	260	short chain dehydrogenase; Provisional	99.87
PRK06841	255	short chain dehydrogenase; Provisional	99.87
PRK07814	263	short chain dehydrogenase; Provisional	99.87
PRK06196	315	oxidoreductase; Provisional	99.87
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.87
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.87
PRK12937	245	short chain dehydrogenase; Provisional	99.87
PRK09242	257	tropinone reductase; Provisional	99.87
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.87
KOG2774	366	consensus NAD dependent epimerase [General functio	99.87
PRK12747	252	short chain dehydrogenase; Provisional	99.87
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.87
PRK12743	256	oxidoreductase; Provisional	99.87
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.87
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.87
PRK07856	252	short chain dehydrogenase; Provisional	99.87
PRK08643	256	acetoin reductase; Validated	99.86
PRK08017	256	oxidoreductase; Provisional	99.86
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.86
PRK07069	251	short chain dehydrogenase; Validated	99.86
PRK07035	252	short chain dehydrogenase; Provisional	99.86
PRK06114	254	short chain dehydrogenase; Provisional	99.86
PRK08265	261	short chain dehydrogenase; Provisional	99.86
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.86
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.86
PRK08324	681	short chain dehydrogenase; Validated	99.86
PRK07825	273	short chain dehydrogenase; Provisional	99.86
PRK07041	230	short chain dehydrogenase; Provisional	99.86
PRK07677	252	short chain dehydrogenase; Provisional	99.86
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.86
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.86
PRK07109	334	short chain dehydrogenase; Provisional	99.86
PRK08251	248	short chain dehydrogenase; Provisional	99.86
PRK06172	253	short chain dehydrogenase; Provisional	99.86
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
PRK07478	254	short chain dehydrogenase; Provisional	99.85
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.85
PRK06057	255	short chain dehydrogenase; Provisional	99.85
PRK07023	243	short chain dehydrogenase; Provisional	99.85
PRK08589	272	short chain dehydrogenase; Validated	99.85
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.85
PRK06197	306	short chain dehydrogenase; Provisional	99.85
PRK07326	237	short chain dehydrogenase; Provisional	99.85
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.85
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.85
PRK12744	257	short chain dehydrogenase; Provisional	99.85
PRK08226	263	short chain dehydrogenase; Provisional	99.85
PRK06949	258	short chain dehydrogenase; Provisional	99.85
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.85
PRK06198	260	short chain dehydrogenase; Provisional	99.85
PRK05866	293	short chain dehydrogenase; Provisional	99.85
PRK06924	251	short chain dehydrogenase; Provisional	99.84
PRK05867	253	short chain dehydrogenase; Provisional	99.84
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.84
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.84
PRK06139	330	short chain dehydrogenase; Provisional	99.84
PRK07904	253	short chain dehydrogenase; Provisional	99.84
PRK07576	264	short chain dehydrogenase; Provisional	99.84
COG2910	211	Putative NADH-flavin reductase [General function p	99.83
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.83
PRK05872	296	short chain dehydrogenase; Provisional	99.83
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.83
PRK08339	263	short chain dehydrogenase; Provisional	99.83
PRK08278	273	short chain dehydrogenase; Provisional	99.83
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.83
PRK12742	237	oxidoreductase; Provisional	99.83
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.83
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.83
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.83
PRK06484	520	short chain dehydrogenase; Validated	99.83
PRK06483	236	dihydromonapterin reductase; Provisional	99.82
PRK07062	265	short chain dehydrogenase; Provisional	99.82
PRK09072	263	short chain dehydrogenase; Provisional	99.82
PRK05854	313	short chain dehydrogenase; Provisional	99.82
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.82
PRK07832	272	short chain dehydrogenase; Provisional	99.82
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.82
PRK06953	222	short chain dehydrogenase; Provisional	99.82
PRK07831	262	short chain dehydrogenase; Provisional	99.82
PRK08703	239	short chain dehydrogenase; Provisional	99.81
PRK07578	199	short chain dehydrogenase; Provisional	99.81
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.81
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.81
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.8
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.8
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.8
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.8
PRK07201	657	short chain dehydrogenase; Provisional	99.8
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.79
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.79
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.79
PRK05855	582	short chain dehydrogenase; Validated	99.79
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.79
PRK08177	225	short chain dehydrogenase; Provisional	99.79
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.79
PRK07791	286	short chain dehydrogenase; Provisional	99.79
PRK06940	275	short chain dehydrogenase; Provisional	99.79
PRK06125	259	short chain dehydrogenase; Provisional	99.79
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.78
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.78
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.78
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.78
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.78
PRK05884	223	short chain dehydrogenase; Provisional	99.78
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.78
PLN02780	320	ketoreductase/ oxidoreductase	99.77
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.77
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.77
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.77
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.76
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.76
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.75
PRK12367	245	short chain dehydrogenase; Provisional	99.75
PRK06484	520	short chain dehydrogenase; Validated	99.75
PRK05599	246	hypothetical protein; Provisional	99.75
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.75
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.74
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.74
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.73
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.73
PRK08303	305	short chain dehydrogenase; Provisional	99.71
PLN00015	308	protochlorophyllide reductase	99.71
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	99.69
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.69
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.66
PRK08862	227	short chain dehydrogenase; Provisional	99.66
KOG1208	314	consensus Dehydrogenases with different specificit	99.66
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.64
KOG0725	270	consensus Reductases with broad range of substrate	99.63
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.63
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.63
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.59
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.59
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.56
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.55
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.55
COG1028	251	FabG Dehydrogenases with different specificities (	99.54
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.54
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.53
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.53
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.51
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.5
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.5
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.49
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.49
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.4
PTZ00325	321	malate dehydrogenase; Provisional	99.29
PRK08309	177	short chain dehydrogenase; Provisional	99.2
PRK06720	169	hypothetical protein; Provisional	99.18
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.18
PLN00106	323	malate dehydrogenase	99.16
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.12
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	99.11
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	98.89
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.87
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	98.78
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.76
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	98.75
PRK05086	312	malate dehydrogenase; Provisional	98.72
PRK09620	229	hypothetical protein; Provisional	98.7
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.69
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.67
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.57
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.5
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	98.43
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.43
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	98.42
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	98.36
PRK14982	340	acyl-ACP reductase; Provisional	98.32
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.29
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	98.25
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	98.19
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	98.19
COG0569	225	TrkA K+ transport systems, NAD-binding component [	98.19
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	98.13
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	98.13
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.08
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	97.97
COG3268	382	Uncharacterized conserved protein [Function unknow	97.91
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	97.89
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	97.88
PRK06223	307	malate dehydrogenase; Reviewed	97.87
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.85
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	97.85
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	97.84
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	97.83
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	97.82
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.81
PRK04148	134	hypothetical protein; Provisional	97.79
PRK05442	326	malate dehydrogenase; Provisional	97.79
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.78
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	97.76
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	97.76
PRK09496	453	trkA potassium transporter peripheral membrane com	97.76
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	97.75
PRK00048	257	dihydrodipicolinate reductase; Provisional	97.75
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.75
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	97.75
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	97.74
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	97.72
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	97.69
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.68
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	97.67
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	97.64
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	97.63
PLN00112	444	malate dehydrogenase (NADP); Provisional	97.62
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	97.62
PTZ00082	321	L-lactate dehydrogenase; Provisional	97.6
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	97.57
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	97.57
PLN02602	350	lactate dehydrogenase	97.55
PRK09496	453	trkA potassium transporter peripheral membrane com	97.54
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.51
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.5
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.49
PTZ00117	319	malate dehydrogenase; Provisional	97.48
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	97.46
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	97.42
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	97.41
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.35
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	97.35
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	97.34
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	97.31
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	97.3
PLN02383	344	aspartate semialdehyde dehydrogenase	97.3
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	97.3
PRK10669	558	putative cation:proton antiport protein; Provision	97.3
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	97.29
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	97.26
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	97.26
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	97.25
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	97.22
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	97.2
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.18
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	97.17
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.15
COG4982	866	3-oxoacyl-[acyl-carrier protein]	97.14
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.13
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	97.13
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	97.11
PLN02353	473	probable UDP-glucose 6-dehydrogenase	97.11
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	97.11
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	97.09
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	97.09
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.08
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	97.08
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	97.08
PRK03659	601	glutathione-regulated potassium-efflux system prot	97.07
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	97.05
PF13380	116	CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5	97.01
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	97.01
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.01
PRK08655	437	prephenate dehydrogenase; Provisional	96.99
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	96.98
COG0026	375	PurK Phosphoribosylaminoimidazole carboxylase (NCA	96.97
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.94
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.94
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.93
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	96.93
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.92
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.92
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.91
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	96.87
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.87
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	96.87
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.85
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	96.85
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	96.84
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	96.83
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	96.83
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	96.8
TIGR01019	286	sucCoAalpha succinyl-CoA synthetase, alpha subunit	96.8
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.78
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	96.75
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.75
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.75
PRK03562	621	glutathione-regulated potassium-efflux system prot	96.75
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.74
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	96.74
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.74
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.74
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.74
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.73
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	96.73
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.71
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	96.71
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	96.69
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.68
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.65
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	96.64
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	96.62
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.62
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.62
PRK08229	341	2-dehydropantoate 2-reductase; Provisional	96.6
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	96.59
PRK08223	287	hypothetical protein; Validated	96.58
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.58
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.57
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.55
PRK07417	279	arogenate dehydrogenase; Reviewed	96.54
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.54
PRK08328	231	hypothetical protein; Provisional	96.53
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.52
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.49
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	96.48
TIGR00036	266	dapB dihydrodipicolinate reductase.	96.48
KOG0172	445	consensus Lysine-ketoglutarate reductase/saccharop	96.44
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.43
PRK04207	341	glyceraldehyde-3-phosphate dehydrogenase; Provisio	96.43
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.43
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.42
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.4
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	96.39
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	96.38
TIGR01142	380	purT phosphoribosylglycinamide formyltransferase 2	96.38
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.38
PRK06849	389	hypothetical protein; Provisional	96.37
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.36
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	96.36
PRK13304	265	L-aspartate dehydrogenase; Reviewed	96.36
PRK13243	333	glyoxylate reductase; Reviewed	96.34
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.33
PRK08818	370	prephenate dehydrogenase; Provisional	96.33
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	96.32
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.31
PRK12409	410	D-amino acid dehydrogenase small subunit; Provisio	96.31
PRK15182	425	Vi polysaccharide biosynthesis protein TviB; Provi	96.31
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	96.29
PF13950	62	Epimerase_Csub: UDP-glucose 4-epimerase C-term sub	96.28
PRK07574	385	formate dehydrogenase; Provisional	96.27
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	96.26
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.25
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.25
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.24
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.24
PRK06436	303	glycerate dehydrogenase; Provisional	96.24
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.24
COG2099	257	CobK Precorrin-6x reductase [Coenzyme metabolism]	96.23
PRK12439	341	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.22
TIGR02717	447	AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP	96.22
PLN00203	519	glutamyl-tRNA reductase	96.21
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.18
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.17
PRK12921	305	2-dehydropantoate 2-reductase; Provisional	96.17
COG0287	279	TyrA Prephenate dehydrogenase [Amino acid transpor	96.15
PRK12480	330	D-lactate dehydrogenase; Provisional	96.15
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	96.15
PRK13303	265	L-aspartate dehydrogenase; Provisional	96.13
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.12
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.12
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	96.12
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.1
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.09

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=2.1e-50  Score=322.86  Aligned_cols=283  Identities=23%  Similarity=0.285  Sum_probs=234.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi~   79 (305)
                      |+||||||+||||+|.+.+|++.|++|++++.-......  .+...     .++++++|+.|.+.+.++|+  ++|.|||
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~--~v~~~-----~~~f~~gDi~D~~~L~~vf~~~~idaViH   73 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKI--ALLKL-----QFKFYEGDLLDRALLTAVFEENKIDAVVH   73 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHH--Hhhhc-----cCceEEeccccHHHHHHHHHhcCCCEEEE
Confidence            689999999999999999999999999999764322111  11110     15899999999999999997  7999999


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhH
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWY  159 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y  159 (305)
                      +||......+.+.|..+++.|+.+|.+|+++++++ ++++|||.||+.+||....    .|++|+.+..|.      ++|
T Consensus        74 FAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~-gv~~~vFSStAavYG~p~~----~PI~E~~~~~p~------NPY  142 (329)
T COG1087          74 FAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQT-GVKKFIFSSTAAVYGEPTT----SPISETSPLAPI------NPY  142 (329)
T ss_pred             CccccccchhhhCHHHHHhhchHhHHHHHHHHHHh-CCCEEEEecchhhcCCCCC----cccCCCCCCCCC------Ccc
Confidence            99999998899999999999999999999999999 9999999999999887643    799999999988      999


Q ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCC-------CchHHHHHHHHhcCCCC---C------CCC--Cc
Q 039049          160 AYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQP-------TSTLLLILAMVKGLRGE---Y------PNT--TV  221 (305)
Q Consensus       160 ~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~-------~~~~~~~~~~~~~~~~~---~------~~~--~~  221 (305)
                      |.||++.|+++++++..++++++++|.+|+.|.......       ......+.+...|+...   +      +++  .|
T Consensus       143 G~sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iR  222 (329)
T COG1087         143 GRSKLMSEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIR  222 (329)
T ss_pred             hhHHHHHHHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeee
Confidence            999999999999999999999999999999998654221       22233444444454432   2      344  89


Q ss_pred             cceeHHHHHHHHHHhhcccccC---ceEEEe-cCCcCHHHHHHHHHHhCCCCCCCC-CCCCCCCCCCCcccchhHHHH-h
Q 039049          222 GFVHIDDVVGAHILAMEETRAS---GRLICS-SSVAHWSPIIEMLKATYPSYPYES-KCSKQEGDNSPHSMDTSKLFE-L  295 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~~~~---~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-l  295 (305)
                      |||||.|+|++.+.+++.-..+   .+||++ |..+|+.|+++.+.++.|. ++|. ...++++++.....|++|+++ |
T Consensus       223 DYIHV~DLA~aH~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~-~ip~~~~~RR~GDpa~l~Ad~~kA~~~L  301 (329)
T COG1087         223 DYIHVDDLADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGR-DIPVEIAPRRAGDPAILVADSSKARQIL  301 (329)
T ss_pred             eeeehhHHHHHHHHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCC-cCceeeCCCCCCCCceeEeCHHHHHHHh
Confidence            9999999999999998764432   369995 8899999999999999974 4554 456789999999999999999 9


Q ss_pred             CCCccc--cCC
Q 039049          296 GFVGFK--SVP  304 (305)
Q Consensus       296 g~~~~~--~l~  304 (305)
                      || +|+  +|+
T Consensus       302 gw-~p~~~~L~  311 (329)
T COG1087         302 GW-QPTYDDLE  311 (329)
T ss_pred             CC-CcccCCHH
Confidence            99 887  554

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=100.00  E-value=5.1e-49  Score=323.67  Aligned_cols=303  Identities=48%  Similarity=0.810  Sum_probs=264.3

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      +++|+||||+||||+|+++.|+++||.|++.+|++++......+..++...+++..+.+|+.|++++.++++++|.|||+
T Consensus         6 ~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH~   85 (327)
T KOG1502|consen    6 GKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFHT   85 (327)
T ss_pred             CcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEEe
Confidence            47899999999999999999999999999999999987777778888887788999999999999999999999999999


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeecc-CCCCCCcccCCCCCCCcccccccchhH
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYR-HDAQQVSPLNESHWSDPDYCKHYNLWY  159 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~-~~~~~~~~~~E~~~~~~~~~~~~~~~Y  159 (305)
                      |.++.+.... +..+.++..+.|+.|++++|++.+.+||||+.||.++.... ........++|+.+.++.+......+|
T Consensus        86 Asp~~~~~~~-~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y  164 (327)
T KOG1502|consen   86 ASPVDFDLED-PEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWY  164 (327)
T ss_pred             CccCCCCCCC-cHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHH
Confidence            9999876333 55579999999999999999999569999999999988765 333345789999999988766555889


Q ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhcc
Q 039049          160 AYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEE  239 (305)
Q Consensus       160 ~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  239 (305)
                      ..||..+|+..+.++++.+++.+++.|+.|+||...+........+.+.++|.....+.....|+||+|+|.+.+.+++.
T Consensus       165 ~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrDVA~AHv~a~E~  244 (327)
T KOG1502|consen  165 ALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVRDVALAHVLALEK  244 (327)
T ss_pred             HHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceeeEeHHHHHHHHHHHHcC
Confidence            99999999999999999999999999999999999887777777888888887777777777799999999999999999


Q ss_pred             cccCceEEEecCCcCHHHHHHHHHHhCCCCCCCCCCCCC-CCCCCCcccchhHHHHhC-CCccccCCC
Q 039049          240 TRASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQ-EGDNSPHSMDTSKLFELG-FVGFKSVPQ  305 (305)
Q Consensus       240 ~~~~~~~~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~lg-~~~~~~l~e  305 (305)
                      +...|.|.++++..++.|+++++.+.+|.+++|...... +.......++++|+++|| | ++++|+|
T Consensus       245 ~~a~GRyic~~~~~~~~ei~~~l~~~~P~~~ip~~~~~~~~~~~~~~~~~~~k~k~lg~~-~~~~l~e  311 (327)
T KOG1502|consen  245 PSAKGRYICVGEVVSIKEIADILRELFPDYPIPKKNAEEHEGFLTSFKVSSEKLKSLGGF-KFRPLEE  311 (327)
T ss_pred             cccCceEEEecCcccHHHHHHHHHHhCCCCCCCCCCCccccccccccccccHHHHhcccc-eecChHH
Confidence            999999999998888999999999999988877555443 344445678999999966 7 8777754

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=2.7e-48  Score=309.25  Aligned_cols=290  Identities=17%  Similarity=0.184  Sum_probs=244.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC--eEEEEEeCCCccc-chhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH--MVRTTVRDPEDLS-KVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDG   76 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~   76 (305)
                      |++|||||.||||++++++++++..  +|+.++.  ..-. ....+... ...+++.++++|+.|.+.+.++++  ++|+
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~Dk--LTYAgn~~~l~~~-~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~   77 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDK--LTYAGNLENLADV-EDSPRYRFVQGDICDRELVDRLFKEYQPDA   77 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEec--ccccCCHHHHHhh-hcCCCceEEeccccCHHHHHHHHHhcCCCe
Confidence            6899999999999999999999865  3555543  2111 11112111 224589999999999999999998  6899


Q ss_pred             EEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCc-cEEEEeccceeeeccCCCCCCcccCCCCCCCccccccc
Q 039049           77 VFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSV-KRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHY  155 (305)
Q Consensus        77 Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  155 (305)
                      |+|+||-.+.+.+-..+..++++|+.||.+|++++++. .. -||+|+||..|||.....  ...++|+++..|.     
T Consensus        78 VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~-~~~frf~HISTDEVYG~l~~~--~~~FtE~tp~~Ps-----  149 (340)
T COG1088          78 VVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKY-WGKFRFHHISTDEVYGDLGLD--DDAFTETTPYNPS-----  149 (340)
T ss_pred             EEEechhccccccccChhhhhhcchHHHHHHHHHHHHh-cccceEEEeccccccccccCC--CCCcccCCCCCCC-----
Confidence            99999999999899999999999999999999999998 54 499999999999987553  2478999999998     


Q ss_pred             chhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCC-CCCC--CccceeHHHHHHH
Q 039049          156 NLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGE-YPNT--TVGFVHIDDVVGA  232 (305)
Q Consensus       156 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~i~v~D~a~~  232 (305)
                       ++|..||+.++.+++.|.+.+|++++|.|++|-|||.+.+ ...++.++..++.|+++. +|++  .|||+||+|-|+|
T Consensus       150 -SPYSASKAasD~lVray~~TYglp~~ItrcSNNYGPyqfp-EKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~a  227 (340)
T COG1088         150 -SPYSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQFP-EKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRA  227 (340)
T ss_pred             -CCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCc-hhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHH
Confidence             9999999999999999999999999999999999998765 245566778888887766 5666  8999999999999


Q ss_pred             HHHhhcccccCceEEEe-cCCcCHHHHHHHHHHhCCCCCC-----CCCCCCCCCCCCCcccchhHHHH-hCCCccc-cCC
Q 039049          233 HILAMEETRASGRLICS-SSVAHWSPIIEMLKATYPSYPY-----ESKCSKQEGDNSPHSMDTSKLFE-LGFVGFK-SVP  304 (305)
Q Consensus       233 ~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-lg~~~~~-~l~  304 (305)
                      +..++++...+++||++ +...+-.|+++.|.+.+++...     ......+++.-..+.+|.+|++. ||| .|. +||
T Consensus       228 i~~Vl~kg~~GE~YNIgg~~E~~Nlevv~~i~~~l~~~~~~~~~li~~V~DRpGHD~RYaid~~Ki~~eLgW-~P~~~fe  306 (340)
T COG1088         228 IDLVLTKGKIGETYNIGGGNERTNLEVVKTICELLGKDKPDYRDLITFVEDRPGHDRRYAIDASKIKRELGW-RPQETFE  306 (340)
T ss_pred             HHHHHhcCcCCceEEeCCCccchHHHHHHHHHHHhCccccchhhheEeccCCCCCccceeechHHHhhhcCC-CcCCCHH
Confidence            99999999999999996 5688999999999999976422     44556688888999999999999 999 888 876


Q ss_pred             C
Q 039049          305 Q  305 (305)
Q Consensus       305 e  305 (305)
                      +
T Consensus       307 ~  307 (340)
T COG1088         307 T  307 (340)
T ss_pred             H
Confidence            4

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=2.8e-47  Score=330.56  Aligned_cols=293  Identities=18%  Similarity=0.182  Sum_probs=227.5

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccc-hhhhh-hcc-CccCceEEEEccCCCcchHHHHhcCCCEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSK-VGFLW-ELN-GAEERLKIMKADLLMEGSFDEAIQGVDGV   77 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~-~~~~~-~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~d~V   77 (305)
                      ||+|||||||||||++|+++|+++|++|++++|....... ..... ... ....+++++.+|+.|.+.+.++++++|+|
T Consensus        15 ~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~d~V   94 (348)
T PRK15181         15 PKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYV   94 (348)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCCCEE
Confidence            5899999999999999999999999999999986542111 11110 000 11236889999999999999999999999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccch
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNL  157 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  157 (305)
                      ||+|+..........+...+++|+.++.+++++|++. ++++|||+||+++|+....    .+..|+++..|.      +
T Consensus        95 iHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~v~~SS~~vyg~~~~----~~~~e~~~~~p~------~  163 (348)
T PRK15181         95 LHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDA-HVSSFTYAASSSTYGDHPD----LPKIEERIGRPL------S  163 (348)
T ss_pred             EECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeechHhhCCCCC----CCCCCCCCCCCC------C
Confidence            9999986654444456668999999999999999998 9999999999999875432    466777766665      7


Q ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCC---CchHHHHHHHHhcCCCC-CCCC--CccceeHHHHHH
Q 039049          158 WYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQP---TSTLLLILAMVKGLRGE-YPNT--TVGFVHIDDVVG  231 (305)
Q Consensus       158 ~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~--~~~~i~v~D~a~  231 (305)
                      +|+.+|.++|.+++.+.++++++++++||+++|||+..+..   .....++..+..++++. ++++  .++|+|++|+|+
T Consensus       164 ~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~  243 (348)
T PRK15181        164 PYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQ  243 (348)
T ss_pred             hhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHH
Confidence            89999999999999988888999999999999999865432   23455666777776654 3444  799999999999


Q ss_pred             HHHHhhcccc---cCceEEEe-cCCcCHHHHHHHHHHhCCCCCC------CCCCCCCCCCCCCcccchhHHHH-hCCCcc
Q 039049          232 AHILAMEETR---ASGRLICS-SSVAHWSPIIEMLKATYPSYPY------ESKCSKQEGDNSPHSMDTSKLFE-LGFVGF  300 (305)
Q Consensus       232 ~~~~~~~~~~---~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~-lg~~~~  300 (305)
                      +++.++....   .++.||++ ++.+|++|+++.+.+.++....      +.....+........+|++|+++ ||| +|
T Consensus       244 a~~~~~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lGw-~P  322 (348)
T PRK15181        244 ANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFLSY-EP  322 (348)
T ss_pred             HHHHHHhcccccCCCCEEEecCCCcEeHHHHHHHHHHHhCcccccccCCCcccCCCCCCcccccccCHHHHHHHhCC-CC
Confidence            9998776432   45689995 6799999999999998863211      11112234445567899999999 999 99


Q ss_pred             c-cCCC
Q 039049          301 K-SVPQ  305 (305)
Q Consensus       301 ~-~l~e  305 (305)
                      + +++|
T Consensus       323 ~~sl~e  328 (348)
T PRK15181        323 EFDIKE  328 (348)
T ss_pred             CCCHHH
Confidence            8 8764

>PLN02214 cinnamoyl-CoA reductase

Probab=100.00  E-value=2.7e-46  Score=323.35  Aligned_cols=296  Identities=39%  Similarity=0.682  Sum_probs=224.9

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ||+|+||||+||||++|++.|+++|++|++++|+.+.... ..+........+++++.+|+.|.+.+.++++++|+|||+
T Consensus        10 ~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   88 (342)
T PLN02214         10 GKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKN-THLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFHT   88 (342)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhH-HHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEEe
Confidence            5789999999999999999999999999999998653221 111111111236889999999999999999999999999


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccce-eeeccCCCCCCcccCCCCCCCcccccccchhH
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCS-SIRYRHDAQQVSPLNESHWSDPDYCKHYNLWY  159 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~-~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y  159 (305)
                      |+...     ..+...+++|+.++.+++++|++. ++++|||+||.. +|+..... ...+++|+++.....+..+.++|
T Consensus        89 A~~~~-----~~~~~~~~~nv~gt~~ll~aa~~~-~v~r~V~~SS~~avyg~~~~~-~~~~~~E~~~~~~~~~~~p~~~Y  161 (342)
T PLN02214         89 ASPVT-----DDPEQMVEPAVNGAKFVINAAAEA-KVKRVVITSSIGAVYMDPNRD-PEAVVDESCWSDLDFCKNTKNWY  161 (342)
T ss_pred             cCCCC-----CCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEeccceeeeccCCCC-CCcccCcccCCChhhccccccHH
Confidence            99753     345668999999999999999998 899999999975 55432211 11357888653322222223789


Q ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhcc
Q 039049          160 AYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEE  239 (305)
Q Consensus       160 ~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  239 (305)
                      +.||..+|++++.+.++++++++++||+++|||+..+........+.....+.....+++.++|||++|+|++++.++++
T Consensus       162 ~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~V~Dva~a~~~al~~  241 (342)
T PLN02214        162 CYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEA  241 (342)
T ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeEHHHHHHHHHHHHhC
Confidence            99999999999999888899999999999999986543222222333445565555666689999999999999999998


Q ss_pred             cccCceEEEecCCcCHHHHHHHHHHhCCCCCCCCCCC-CCCCCCCCcccchhHHHHhCCCccccCCC
Q 039049          240 TRASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCS-KQEGDNSPHSMDTSKLFELGFVGFKSVPQ  305 (305)
Q Consensus       240 ~~~~~~~~~~~~~~s~~el~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~lg~~~~~~l~e  305 (305)
                      +..++.||+++...++.|+++.+.+.++..+++.... ..........+|++|+++||| +|++|+|
T Consensus       242 ~~~~g~yn~~~~~~~~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~LG~-~p~~lee  307 (342)
T PLN02214        242 PSASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLGL-EFTSTKQ  307 (342)
T ss_pred             cccCCcEEEecCCCCHHHHHHHHHHHCCCCCCCCCCccccCCCCCccccCcHHHHHcCC-cccCHHH
Confidence            7667789998778999999999999997554443221 123344456789999988999 9988764

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=6.6e-46  Score=319.37  Aligned_cols=301  Identities=42%  Similarity=0.683  Sum_probs=226.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      ++||||||+||||++++++|+++|++|+++.|+.........+........+++++.+|+.|.+.+.++++++|+|||+|
T Consensus         6 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~A   85 (322)
T PLN02986          6 KLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFHTA   85 (322)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEEeC
Confidence            78999999999999999999999999999999876433222221111112468999999999999999999999999999


Q ss_pred             cccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeecc-CCCCCCcccCCCCCCCcccccccchhHH
Q 039049           82 SPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYR-HDAQQVSPLNESHWSDPDYCKHYNLWYA  160 (305)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~-~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  160 (305)
                      +..... ..++....+++|+.++.+++++|++..+++||||+||.++++.. .......+++|+++..|.....+.+.|+
T Consensus        86 ~~~~~~-~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~  164 (322)
T PLN02986         86 SPVFFT-VKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYP  164 (322)
T ss_pred             CCcCCC-CCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccchH
Confidence            975432 22334457899999999999999875368999999998765322 1111124678887765532222237799


Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhccc
Q 039049          161 YAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       161 ~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  240 (305)
                      .||.++|.+++.+.++++++++++||+++|||...+.......++.....+... ++...++|+|++|+|++++.+++++
T Consensus       165 ~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~v~v~Dva~a~~~al~~~  243 (322)
T PLN02986        165 LSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNL-FNNRFYRFVDVRDVALAHIKALETP  243 (322)
T ss_pred             HHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCC-CCCcCcceeEHHHHHHHHHHHhcCc
Confidence            999999999999998899999999999999998654333334455566666543 4555789999999999999999987


Q ss_pred             ccCceEEEecCCcCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCcccchhHHHHhCCCccccCCC
Q 039049          241 RASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELGFVGFKSVPQ  305 (305)
Q Consensus       241 ~~~~~~~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~l~e  305 (305)
                      ..++.||++++.+|+.|+++.+.+.+|...++..............+|++|++.||| +|++|+|
T Consensus       244 ~~~~~yni~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~lg~-~~~~l~e  307 (322)
T PLN02986        244 SANGRYIIDGPIMSVNDIIDILRELFPDLCIADTNEESEMNEMICKVCVEKVKNLGV-EFTPMKS  307 (322)
T ss_pred             ccCCcEEEecCCCCHHHHHHHHHHHCCCCCCCCCCccccccccCCccCHHHHHHcCC-cccCHHH
Confidence            766789998888999999999999998655443211111111123489999977999 9988764

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=9e-46  Score=318.75  Aligned_cols=300  Identities=43%  Similarity=0.727  Sum_probs=227.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      |+||||||+||||++|+++|+++|++|++++|+.........+.......++++++++|+.|++.+.++++++|+|||+|
T Consensus         5 ~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A   84 (322)
T PLN02662          5 KVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFHTA   84 (322)
T ss_pred             CEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEEeC
Confidence            68999999999999999999999999999999865432222222121223478999999999999999999999999999


Q ss_pred             cccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEecccee--eeccCCCCCCcccCCCCCCCcccccccchhH
Q 039049           82 SPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSS--IRYRHDAQQVSPLNESHWSDPDYCKHYNLWY  159 (305)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~--~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y  159 (305)
                      +..... ..++....+++|+.++.+++++|++..++++|||+||.++  |++.... ...+++|+.+..|.......+.|
T Consensus        85 ~~~~~~-~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~-~~~~~~E~~~~~p~~~~~~~~~Y  162 (322)
T PLN02662         85 SPFYHD-VTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLT-PDVVVDETWFSDPAFCEESKLWY  162 (322)
T ss_pred             CcccCC-CCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCC-CCCcCCcccCCChhHhhcccchH
Confidence            976432 2233336889999999999999887546889999999874  3322211 12467887776654322222579


Q ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhcc
Q 039049          160 AYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEE  239 (305)
Q Consensus       160 ~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  239 (305)
                      +.+|.++|++++.+.++++++++++||+++|||...+........+..+..+.. ..+++.++|+|++|+|++++.++++
T Consensus       163 ~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~a~~~~~~~  241 (322)
T PLN02662        163 VLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQ-TFPNASYRWVDVRDVANAHIQAFEI  241 (322)
T ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCc-cCCCCCcCeEEHHHHHHHHHHHhcC
Confidence            999999999999998889999999999999999865433333444555555543 3456689999999999999999998


Q ss_pred             cccCceEEEecCCcCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCcccchhHHHHhCCCccccCCC
Q 039049          240 TRASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELGFVGFKSVPQ  305 (305)
Q Consensus       240 ~~~~~~~~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~l~e  305 (305)
                      +...+.||+++..+|++|+++.+.+.++..+++..............+|++|+++||| ++++|+|
T Consensus       242 ~~~~~~~~~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~-~~~~~~~  306 (322)
T PLN02662        242 PSASGRYCLVERVVHYSEVVKILHELYPTLQLPEKCADDKPYVPTYQVSKEKAKSLGI-EFIPLEV  306 (322)
T ss_pred             cCcCCcEEEeCCCCCHHHHHHHHHHHCCCCCCCCCCCCccccccccccChHHHHHhCC-ccccHHH
Confidence            7666788888888999999999999987655543322222344567899999988999 8777753

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=3.5e-45  Score=315.33  Aligned_cols=303  Identities=38%  Similarity=0.620  Sum_probs=230.9

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      +|+||||||+||||++|++.|+++|++|++++|+.........+........+++++.+|+.|.+.+.++++++|+|||+
T Consensus         5 ~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~   84 (325)
T PLN02989          5 GKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFHT   84 (325)
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEEe
Confidence            37899999999999999999999999999999887643222211111111246889999999999999999999999999


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCC-CCCcccCCCCCCCcccccccchhH
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDA-QQVSPLNESHWSDPDYCKHYNLWY  159 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~-~~~~~~~E~~~~~~~~~~~~~~~Y  159 (305)
                      |+........+.+...+++|+.++.+++++|.+..++++||++||.++|++.... ....+++|+++..|.....+.++|
T Consensus        85 A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y  164 (325)
T PLN02989         85 ASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQWY  164 (325)
T ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccch
Confidence            9976543344556778999999999999999875357899999999887754210 112467888887765332223679


Q ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhcc
Q 039049          160 AYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEE  239 (305)
Q Consensus       160 ~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  239 (305)
                      +.+|.++|.+++.+.++++++++++||+++|||+..+.......++..+..++.. .+...++|+|++|+|++++.++++
T Consensus       165 ~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~-~~~~~r~~i~v~Dva~a~~~~l~~  243 (325)
T PLN02989        165 VLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNP-FNTTHHRFVDVRDVALAHVKALET  243 (325)
T ss_pred             HHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCC-CCCcCcCeeEHHHHHHHHHHHhcC
Confidence            9999999999999988889999999999999998765433334455566555543 234468999999999999999998


Q ss_pred             cccCceEEEecCCcCHHHHHHHHHHhCCCCCCCCCCCC-CCCCCCCcccchhHHHHhCCCccc-cCCC
Q 039049          240 TRASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSK-QEGDNSPHSMDTSKLFELGFVGFK-SVPQ  305 (305)
Q Consensus       240 ~~~~~~~~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~lg~~~~~-~l~e  305 (305)
                      +..++.||++++.+|++|+++.+.+.+|...++..... .+.....+..|++|+++||| +|. +|+|
T Consensus       244 ~~~~~~~ni~~~~~s~~ei~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~-~p~~~l~~  310 (325)
T PLN02989        244 PSANGRYIIDGPVVTIKDIENVLREFFPDLCIADRNEDITELNSVTFNVCLDKVKSLGI-IEFTPTET  310 (325)
T ss_pred             cccCceEEEecCCCCHHHHHHHHHHHCCCCCCCCCCCCcccccccCcCCCHHHHHHcCC-CCCCCHHH
Confidence            76667899987899999999999999975433211111 12223456889999888999 888 8864

>PLN02650 dihydroflavonol-4-reductase

Probab=100.00  E-value=6.3e-44  Score=310.43  Aligned_cols=298  Identities=39%  Similarity=0.699  Sum_probs=217.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      |+||||||+||||++|++.|+++|++|++++|+.........+........+++++.+|+.|.+.+.++++++|+|||+|
T Consensus         6 k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH~A   85 (351)
T PLN02650          6 ETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFHVA   85 (351)
T ss_pred             CEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEEeC
Confidence            68999999999999999999999999999999865433222221111112358899999999999999999999999999


Q ss_pred             cccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcc-cCCCCCCCccc---ccccch
Q 039049           82 SPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSP-LNESHWSDPDY---CKHYNL  157 (305)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~-~~E~~~~~~~~---~~~~~~  157 (305)
                      +..... ..++....+++|+.++.+++++|.+...+++|||+||.++++.....   .+ ++|+.+.....   ...+.+
T Consensus        86 ~~~~~~-~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~---~~~~~E~~~~~~~~~~~~~~~~~  161 (351)
T PLN02650         86 TPMDFE-SKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQ---KPVYDEDCWSDLDFCRRKKMTGW  161 (351)
T ss_pred             CCCCCC-CCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCC---CCccCcccCCchhhhhccccccc
Confidence            875432 22344568899999999999999987237899999999877653221   23 46664321110   011125


Q ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCc-hHHHHHHHHhcCCCCCC-CCCccceeHHHHHHHHHH
Q 039049          158 WYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTS-TLLLILAMVKGLRGEYP-NTTVGFVHIDDVVGAHIL  235 (305)
Q Consensus       158 ~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~i~v~D~a~~~~~  235 (305)
                      +|+.||.++|.+++.++++++++++++||+++|||+....... ....+ ....+.....+ .+.++|+|++|+|++++.
T Consensus       162 ~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~r~~v~V~Dva~a~~~  240 (351)
T PLN02650        162 MYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITAL-SLITGNEAHYSIIKQGQFVHLDDLCNAHIF  240 (351)
T ss_pred             hHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHH-HHhcCCccccCcCCCcceeeHHHHHHHHHH
Confidence            7999999999999999989999999999999999986542221 11111 11223222222 226899999999999999


Q ss_pred             hhcccccCceEEEecCCcCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCcccchhHHHHhCCCccc-cCCC
Q 039049          236 AMEETRASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELGFVGFK-SVPQ  305 (305)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~-~l~e  305 (305)
                      +++++..++.|++++..+|+.|+++.+.+.++...++..............+|++|+++||| +|+ +|+|
T Consensus       241 ~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~-~p~~~l~e  310 (351)
T PLN02650        241 LFEHPAAEGRYICSSHDATIHDLAKMLREKYPEYNIPARFPGIDEDLKSVEFSSKKLTDLGF-TFKYSLED  310 (351)
T ss_pred             HhcCcCcCceEEecCCCcCHHHHHHHHHHhCcccCCCCCCCCcCcccccccCChHHHHHhCC-CCCCCHHH
Confidence            99887666678777888999999999999887544443322223344556789999866999 998 8764

>PLN00198 anthocyanidin reductase; Provisional

Probab=100.00  E-value=9.2e-44  Score=307.95  Aligned_cols=301  Identities=37%  Similarity=0.597  Sum_probs=218.3

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ||+||||||+||||++|++.|+++|++|+++.|+.........+..... .++++++.+|+.|.+.+.++++++|+|||+
T Consensus         9 ~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   87 (338)
T PLN00198          9 KKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQE-LGDLKIFGADLTDEESFEAPIAGCDLVFHV   87 (338)
T ss_pred             CCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCC-CCceEEEEcCCCChHHHHHHHhcCCEEEEe
Confidence            4789999999999999999999999999999998653322111111111 136889999999999999999999999999


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCccc---ccccch
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDY---CKHYNL  157 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~---~~~~~~  157 (305)
                      |+..... ..++...++++|+.++.++++++.+..++++|||+||.++|+.........+++|+.+.....   ...+.+
T Consensus        88 A~~~~~~-~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~  166 (338)
T PLN00198         88 ATPVNFA-SEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTW  166 (338)
T ss_pred             CCCCccC-CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCccc
Confidence            9965322 233444577999999999999998864589999999999988542111123555653211000   001226


Q ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCC-C-------CCCccceeHHHH
Q 039049          158 WYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEY-P-------NTTVGFVHIDDV  229 (305)
Q Consensus       158 ~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~i~v~D~  229 (305)
                      +|+.||.++|.+++.++++++++++++||+++|||+..........++.....+..... +       ++.++|+|++|+
T Consensus       167 ~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D~  246 (338)
T PLN00198        167 GYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVEDV  246 (338)
T ss_pred             hhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcceeEHHHH
Confidence            79999999999999999889999999999999999864432222223344455544322 2       224799999999


Q ss_pred             HHHHHHhhcccccCceEEEecCCcCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCcccchhHHHHhCCCccc-cCCC
Q 039049          230 VGAHILAMEETRASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELGFVGFK-SVPQ  305 (305)
Q Consensus       230 a~~~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~-~l~e  305 (305)
                      |++++.+++.+...+.|++++...|+.|+++.+.+..+...++......+ ......+|++|++++|| +|+ +|+|
T Consensus       247 a~a~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~k~~~~G~-~p~~~l~~  321 (338)
T PLN00198        247 CRAHIFLAEKESASGRYICCAANTSVPELAKFLIKRYPQYQVPTDFGDFP-SKAKLIISSEKLISEGF-SFEYGIEE  321 (338)
T ss_pred             HHHHHHHhhCcCcCCcEEEecCCCCHHHHHHHHHHHCCCCCCCccccccC-CCCccccChHHHHhCCc-eecCcHHH
Confidence            99999999886655678777888999999999999986543432222111 22346789999988999 999 8864

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=100.00  E-value=1.1e-43  Score=309.77  Aligned_cols=294  Identities=19%  Similarity=0.210  Sum_probs=222.5

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVF   78 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi   78 (305)
                      |++|||||||||||++|++.|+++|++|+++.++.........+.... ...+++++.+|+.|.+.+.++++  ++|+||
T Consensus         1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vi   79 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVA-QSERFAFEKVDICDRAELARVFTEHQPDCVM   79 (355)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcc-cCCceEEEECCCcChHHHHHHHhhcCCCEEE
Confidence            899999999999999999999999988665544332211111111111 12367889999999999999998  489999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhc--------CCccEEEEeccceeeeccCCCCCCcccCCCCCCCcc
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKA--------KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPD  150 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--------~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~  150 (305)
                      |+||........+.+...+++|+.++.+++++|.+.        .++++||++||.++|+.....  ..+++|+++..|.
T Consensus        80 h~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~--~~~~~E~~~~~p~  157 (355)
T PRK10217         80 HLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHST--DDFFTETTPYAPS  157 (355)
T ss_pred             ECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCC--CCCcCCCCCCCCC
Confidence            999987544334456779999999999999999762        257899999999988754221  2468888877766


Q ss_pred             cccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCC-CCC--CCccceeHH
Q 039049          151 YCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGE-YPN--TTVGFVHID  227 (305)
Q Consensus       151 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~i~v~  227 (305)
                            +.|+.||.++|.+++.++++++++++++||+++|||+..+. .....++.....+.++. +++  ..++|+|++
T Consensus       158 ------s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~-~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~  230 (355)
T PRK10217        158 ------SPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPE-KLIPLMILNALAGKPLPVYGNGQQIRDWLYVE  230 (355)
T ss_pred             ------ChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcc-cHHHHHHHHHhcCCCceEeCCCCeeeCcCcHH
Confidence                  78999999999999999888999999999999999986432 23344556666666543 344  489999999


Q ss_pred             HHHHHHHHhhcccccCceEEEe-cCCcCHHHHHHHHHHhCCCCC--CCC----------CCCCCCCCCCCcccchhHHHH
Q 039049          228 DVVGAHILAMEETRASGRLICS-SSVAHWSPIIEMLKATYPSYP--YES----------KCSKQEGDNSPHSMDTSKLFE  294 (305)
Q Consensus       228 D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~--~~~----------~~~~~~~~~~~~~~~~~~~~~  294 (305)
                      |+|+++..+++....++.||++ ++.+|++|+++.+.+.++...  .+.          ....++.....+.+|++|+++
T Consensus       231 D~a~a~~~~~~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~  310 (355)
T PRK10217        231 DHARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPQGVAHYRDLITFVADRPGHDLRYAIDASKIAR  310 (355)
T ss_pred             HHHHHHHHHHhcCCCCCeEEeCCCCcccHHHHHHHHHHHhcccccccccccccccccceecCCCCCCCcccccCHHHHHH
Confidence            9999999999886667789996 678999999999999886311  110          011123334557889999999


Q ss_pred             -hCCCccc-cCCC
Q 039049          295 -LGFVGFK-SVPQ  305 (305)
Q Consensus       295 -lg~~~~~-~l~e  305 (305)
                       ||| +|+ +|+|
T Consensus       311 ~lg~-~p~~~l~e  322 (355)
T PRK10217        311 ELGW-LPQETFES  322 (355)
T ss_pred             hcCC-CCcCcHHH
Confidence             999 987 8764

>PLN02427 UDP-apiose/xylose synthase

Probab=100.00  E-value=4.6e-43  Score=308.58  Aligned_cols=296  Identities=18%  Similarity=0.207  Sum_probs=213.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHc-CCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDK-GHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      |+|||||||||||++|++.|+++ |++|++++|+..+........ ......+++++.+|+.|.+.+.++++++|+|||+
T Consensus        15 ~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~-~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~ViHl   93 (386)
T PLN02427         15 LTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPD-TVPWSGRIQFHRINIKHDSRLEGLIKMADLTINL   93 (386)
T ss_pred             cEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccc-cccCCCCeEEEEcCCCChHHHHHHhhcCCEEEEc
Confidence            68999999999999999999998 599999998754322111000 0011236899999999999999999999999999


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcc----------
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPD----------  150 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~----------  150 (305)
                      |+...+..+...+...+..|+.++.+++++|++. + ++|||+||.++|+....    .+..|+.+..+.          
T Consensus        94 Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~-~-~r~v~~SS~~vYg~~~~----~~~~e~~p~~~~~~~~~~~e~~  167 (386)
T PLN02427         94 AAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-N-KRLIHFSTCEVYGKTIG----SFLPKDHPLRQDPAFYVLKEDE  167 (386)
T ss_pred             ccccChhhhhhChHHHHHHHHHHHHHHHHHHHhc-C-CEEEEEeeeeeeCCCcC----CCCCcccccccccccccccccc
Confidence            9976543333344456778999999999999887 6 89999999998875421    122332221110          


Q ss_pred             ------cccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCC---------C-CchHHHHHHHHhcCCC
Q 039049          151 ------YCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQ---------P-TSTLLLILAMVKGLRG  214 (305)
Q Consensus       151 ------~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~---------~-~~~~~~~~~~~~~~~~  214 (305)
                            ....+.+.|+.+|.++|.+++.+++.++++++++||+++|||+....         . .....++..+..+++.
T Consensus       168 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  247 (386)
T PLN02427        168 SPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPL  247 (386)
T ss_pred             cccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCe
Confidence                  00011257999999999999998888899999999999999975311         0 1122334555566554


Q ss_pred             C-CCC--CCccceeHHHHHHHHHHhhcccc--cCceEEEec--CCcCHHHHHHHHHHhCCCCCC-CC------CCCC---
Q 039049          215 E-YPN--TTVGFVHIDDVVGAHILAMEETR--ASGRLICSS--SVAHWSPIIEMLKATYPSYPY-ES------KCSK---  277 (305)
Q Consensus       215 ~-~~~--~~~~~i~v~D~a~~~~~~~~~~~--~~~~~~~~~--~~~s~~el~~~i~~~~~~~~~-~~------~~~~---  277 (305)
                      . .++  ..++|+|++|+|++++.+++++.  .++.||+++  +.+|+.|+++.+.+.+|.... +.      ....   
T Consensus       248 ~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~  327 (386)
T PLN02427        248 KLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEPALEEPTVDVSSKEF  327 (386)
T ss_pred             EEECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhccccccccccccccccCcccc
Confidence            3 333  37899999999999999998763  356899964  489999999999999874211 10      0000   


Q ss_pred             ---CCCCCCCcccchhHHHH-hCCCccc-cCCC
Q 039049          278 ---QEGDNSPHSMDTSKLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       278 ---~~~~~~~~~~~~~~~~~-lg~~~~~-~l~e  305 (305)
                         ...+......|.+|+++ ||| +|+ +|+|
T Consensus       328 ~~~~~~~~~~~~~d~~k~~~~lGw-~p~~~l~~  359 (386)
T PLN02427        328 YGEGYDDSDKRIPDMTIINKQLGW-NPKTSLWD  359 (386)
T ss_pred             cCccccchhhccCCHHHHHHhcCC-CcCccHHH
Confidence               11234566789999999 999 998 8764

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=100.00  E-value=5e-43  Score=304.32  Aligned_cols=291  Identities=16%  Similarity=0.191  Sum_probs=217.4

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHc-CCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCC-CcchHHHHhcCCCEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDK-GHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLL-MEGSFDEAIQGVDGVF   78 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-d~~~~~~~~~~~d~Vi   78 (305)
                      ||+|||||||||||++|++.|+++ |++|++++|+.....   .+.  .  ..+++++.+|+. +.+.+.++++++|+||
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~---~~~--~--~~~~~~~~~Dl~~~~~~~~~~~~~~d~Vi   73 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLG---DLV--N--HPRMHFFEGDITINKEWIEYHVKKCDVIL   73 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHH---Hhc--c--CCCeEEEeCCCCCCHHHHHHHHcCCCEEE
Confidence            889999999999999999999986 699999998653211   111  1  236899999998 6677888889999999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccc-cccch
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYC-KHYNL  157 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~-~~~~~  157 (305)
                      |+|+...+......+...+++|+.++.+++++|++. + ++|||+||+.+|+....    .+++|++++....+ ..+.+
T Consensus        74 H~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~-~-~~~v~~SS~~vyg~~~~----~~~~ee~~~~~~~~~~~p~~  147 (347)
T PRK11908         74 PLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFPSTSEVYGMCPD----EEFDPEASPLVYGPINKPRW  147 (347)
T ss_pred             ECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhc-C-CeEEEEecceeeccCCC----cCcCccccccccCcCCCccc
Confidence            999986654344556668899999999999999988 7 79999999998875422    35666654321100 11126


Q ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCC-------CCchHHHHHHHHhcCCCCC---CCCCccceeHH
Q 039049          158 WYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQ-------PTSTLLLILAMVKGLRGEY---PNTTVGFVHID  227 (305)
Q Consensus       158 ~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~---~~~~~~~i~v~  227 (305)
                      .|+.+|.++|..++.++++++++++++||+++|||+..+.       ......++..+..+.+..+   +.+.++|||++
T Consensus       148 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~  227 (347)
T PRK11908        148 IYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDID  227 (347)
T ss_pred             hHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHH
Confidence            7999999999999999888999999999999999985421       1223456667777766443   33489999999


Q ss_pred             HHHHHHHHhhcccc---cCceEEEec--CCcCHHHHHHHHHHhCCCCCCC------CCCC---C------CCCCCCCccc
Q 039049          228 DVVGAHILAMEETR---ASGRLICSS--SVAHWSPIIEMLKATYPSYPYE------SKCS---K------QEGDNSPHSM  287 (305)
Q Consensus       228 D~a~~~~~~~~~~~---~~~~~~~~~--~~~s~~el~~~i~~~~~~~~~~------~~~~---~------~~~~~~~~~~  287 (305)
                      |++++++.+++++.   .++.||+++  ..+|++|+++.+.+.++..+-.      ....   .      .......+..
T Consensus       228 D~a~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (347)
T PRK11908        228 DGIDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEYAESAKKVKLVETTSGAYYGKGYQDVQNRVP  307 (347)
T ss_pred             HHHHHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcccccccccccccccCCchhccCcCcchhccccC
Confidence            99999999998753   356899964  3799999999999988642110      0000   0      1112335567


Q ss_pred             chhHHHH-hCCCccc-cCCC
Q 039049          288 DTSKLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       288 ~~~~~~~-lg~~~~~-~l~e  305 (305)
                      |++|+++ ||| +|+ +|+|
T Consensus       308 d~~k~~~~lGw-~p~~~l~~  326 (347)
T PRK11908        308 KIDNTMQELGW-APKTTMDD  326 (347)
T ss_pred             ChHHHHHHcCC-CCCCcHHH
Confidence            8999999 999 998 8764

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=100.00  E-value=7.6e-43  Score=303.32  Aligned_cols=292  Identities=21%  Similarity=0.129  Sum_probs=224.3

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVF   78 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi   78 (305)
                      +|+||||||+||||+++++.|+++|++|++++|+..........  . ....+++++.+|+.|.+.+.++++  ++|+||
T Consensus         4 ~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~--~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi   80 (349)
T TIGR02622         4 GKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFEL--L-NLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVF   80 (349)
T ss_pred             CCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHH--H-hhcCCceEEEccCCCHHHHHHHHhhcCCCEEE
Confidence            47899999999999999999999999999999986543221111  1 112357789999999999999887  469999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchh
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLW  158 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  158 (305)
                      |+|+........+.+...+++|+.++.+++++++..+.+++||++||..+|+....   ..+++|+++..|.      ++
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~---~~~~~e~~~~~p~------~~  151 (349)
T TIGR02622        81 HLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEW---VWGYRETDPLGGH------DP  151 (349)
T ss_pred             ECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCC---CCCCccCCCCCCC------Cc
Confidence            99997654444556677899999999999999988722789999999998865321   1457777776665      78


Q ss_pred             HHHHHHHHHHHHHHHHHHc-------CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCC--CCccceeHHHH
Q 039049          159 YAYAKTIAEKEAWRIAKDC-------GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPN--TTVGFVHIDDV  229 (305)
Q Consensus       159 Y~~sK~~~E~~~~~~~~~~-------~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~  229 (305)
                      |+.+|.++|.+++.+++++       +++++++||+++|||+..........++.....+.+..+++  +.++|+|++|+
T Consensus       152 Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~v~D~  231 (349)
T TIGR02622       152 YSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQHVLEP  231 (349)
T ss_pred             chhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcccceeeHHHH
Confidence            9999999999999887664       89999999999999975332234456777777777666543  48999999999


Q ss_pred             HHHHHHhhccc-----ccCceEEEec---CCcCHHHHHHHHHHhCCCCCCCCCC---CCCCCCCCCcccchhHHHH-hCC
Q 039049          230 VGAHILAMEET-----RASGRLICSS---SVAHWSPIIEMLKATYPSYPYESKC---SKQEGDNSPHSMDTSKLFE-LGF  297 (305)
Q Consensus       230 a~~~~~~~~~~-----~~~~~~~~~~---~~~s~~el~~~i~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-lg~  297 (305)
                      |++++.+++..     ..++.||+++   +.+|+.|+++.+.+..+..++....   ..+........+|++|+++ |||
T Consensus       232 a~a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw  311 (349)
T TIGR02622       232 LSGYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGDDAEWEDDSDLNHPHEARLLKLDSSKARTLLGW  311 (349)
T ss_pred             HHHHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcCCCCceeeccCCCCCcccceeecCHHHHHHHhCC
Confidence            99999887642     2256899963   5899999999999887643222111   1233445567899999999 999


Q ss_pred             Cccc-cCCC
Q 039049          298 VGFK-SVPQ  305 (305)
Q Consensus       298 ~~~~-~l~e  305 (305)
                       +|+ +|+|
T Consensus       312 -~p~~~l~~  319 (349)
T TIGR02622       312 -HPRWGLEE  319 (349)
T ss_pred             -CCCCCHHH
Confidence             998 8753

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=8.6e-43  Score=308.08  Aligned_cols=282  Identities=22%  Similarity=0.247  Sum_probs=214.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      |||||||||||||++|+++|+++|++|++++|.......  ...... ...+++++.+|+.+..     +.++|+|||+|
T Consensus       121 mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~--~~~~~~-~~~~~~~~~~Di~~~~-----~~~~D~ViHlA  192 (436)
T PLN02166        121 LRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKE--NLVHLF-GNPRFELIRHDVVEPI-----LLEVDQIYHLA  192 (436)
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHh--Hhhhhc-cCCceEEEECcccccc-----ccCCCEEEECc
Confidence            689999999999999999999999999999886432111  111111 1236788888987642     45799999999


Q ss_pred             cccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCC-----CCCcccccccc
Q 039049           82 SPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH-----WSDPDYCKHYN  156 (305)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~-----~~~~~~~~~~~  156 (305)
                      +...+.....++...+++|+.++.+++++|++. ++ +|||+||.++|+....    .+.+|+.     +..|.      
T Consensus       193 a~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~-g~-r~V~~SS~~VYg~~~~----~p~~E~~~~~~~p~~p~------  260 (436)
T PLN02166        193 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-GA-RFLLTSTSEVYGDPLE----HPQKETYWGNVNPIGER------  260 (436)
T ss_pred             eeccchhhccCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEECcHHHhCCCCC----CCCCccccccCCCCCCC------
Confidence            986654344456778999999999999999998 75 8999999999875422    4666764     33333      


Q ss_pred             hhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCC-CchHHHHHHHHhcCCCC-CCCC--CccceeHHHHHHH
Q 039049          157 LWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQP-TSTLLLILAMVKGLRGE-YPNT--TVGFVHIDDVVGA  232 (305)
Q Consensus       157 ~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~--~~~~i~v~D~a~~  232 (305)
                      +.|+.+|..+|++++.+++.++++++++||+++|||+..... .....++..+..++++. ++++  .++|+|++|++++
T Consensus       261 s~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~a  340 (436)
T PLN02166        261 SCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDG  340 (436)
T ss_pred             CchHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHH
Confidence            679999999999999999888999999999999999864322 23345677777776654 3544  7999999999999


Q ss_pred             HHHhhcccccCceEEEe-cCCcCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCcccchhHHHH-hCCCccc-cCCC
Q 039049          233 HILAMEETRASGRLICS-SSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       233 ~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lg~~~~~-~l~e  305 (305)
                      +..+++.. ..+.||++ ++.+|+.|+++.+.+.+|.............+.....+|++|+++ ||| +|+ +|+|
T Consensus       341 i~~~~~~~-~~giyNIgs~~~~Si~ela~~I~~~~g~~~~i~~~p~~~~~~~~~~~d~~Ka~~~LGw-~P~~sl~e  414 (436)
T PLN02166        341 LVALMEGE-HVGPFNLGNPGEFTMLELAEVVKETIDSSATIEFKPNTADDPHKRKPDISKAKELLNW-EPKISLRE  414 (436)
T ss_pred             HHHHHhcC-CCceEEeCCCCcEeHHHHHHHHHHHhCCCCCeeeCCCCCCCccccccCHHHHHHHcCC-CCCCCHHH
Confidence            99999764 45689995 678999999999999997422111212233445567889999999 999 997 7754

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=1.2e-42  Score=301.56  Aligned_cols=291  Identities=19%  Similarity=0.140  Sum_probs=220.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcc--cchhhhhh-c-cCccCceEEEEccCCCcchHHHHhc--CCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDL--SKVGFLWE-L-NGAEERLKIMKADLLMEGSFDEAIQ--GVD   75 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~--~~~~~~~~-~-~~~~~~~~~~~~D~~d~~~~~~~~~--~~d   75 (305)
                      |+||||||+||||++|++.|++.|++|++++|+++..  .....+.. . .....+++++++|+.|.+.+.++++  ++|
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d   80 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT   80 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence            6899999999999999999999999999999986421  11111100 0 0112368999999999999999998  469


Q ss_pred             EEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCcc---EEEEeccceeeeccCCCCCCcccCCCCCCCcccc
Q 039049           76 GVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVK---RVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYC  152 (305)
Q Consensus        76 ~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~  152 (305)
                      +|||+|+......+...+...+++|+.++.+++++|++. +++   +|||+||.++|+....    .+++|+.+..|.  
T Consensus        81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~-~~~~~~~~v~~SS~~vyg~~~~----~~~~E~~~~~p~--  153 (343)
T TIGR01472        81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTL-GLIKSVKFYQASTSELYGKVQE----IPQNETTPFYPR--  153 (343)
T ss_pred             EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHh-CCCcCeeEEEeccHHhhCCCCC----CCCCCCCCCCCC--
Confidence            999999987654344445667789999999999999987 653   8999999999875422    467888887776  


Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCC--CchHHHHHHHHhcCCC--CCCC--CCccceeH
Q 039049          153 KHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQP--TSTLLLILAMVKGLRG--EYPN--TTVGFVHI  226 (305)
Q Consensus       153 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~--~~~~--~~~~~i~v  226 (305)
                          ++|+.||.++|.+++.+++++++++++.|+.++|||+.....  .....++..+..+.+.  .+++  +.++|+|+
T Consensus       154 ----~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V  229 (343)
T TIGR01472       154 ----SPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHA  229 (343)
T ss_pred             ----ChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeH
Confidence                889999999999999998888999999999999999743321  1223344455556432  2343  48999999


Q ss_pred             HHHHHHHHHhhcccccCceEEEe-cCCcCHHHHHHHHHHhCCCCC-C-------------------CCC-CCCCCCCCCC
Q 039049          227 DDVVGAHILAMEETRASGRLICS-SSVAHWSPIIEMLKATYPSYP-Y-------------------ESK-CSKQEGDNSP  284 (305)
Q Consensus       227 ~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~-~-------------------~~~-~~~~~~~~~~  284 (305)
                      +|+|++++.+++++. .+.||++ ++.+|++|+++.+.+.+|... .                   +.. ...++.+...
T Consensus       230 ~D~a~a~~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (343)
T TIGR01472       230 KDYVEAMWLMLQQDK-PDDYVIATGETHSVREFVEVSFEYIGKTLNWKDKGINEVGRCKETGKVHVEIDPRYFRPTEVDL  308 (343)
T ss_pred             HHHHHHHHHHHhcCC-CccEEecCCCceeHHHHHHHHHHHcCCCcccccccccccccccccCceeEEeCccccCCCccch
Confidence            999999999998753 4689995 789999999999999997421 0                   000 0113444555


Q ss_pred             cccchhHHHH-hCCCccc-cCCC
Q 039049          285 HSMDTSKLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       285 ~~~~~~~~~~-lg~~~~~-~l~e  305 (305)
                      +..|++|+++ ||| +|+ +++|
T Consensus       309 ~~~d~~k~~~~lgw-~p~~~l~e  330 (343)
T TIGR01472       309 LLGDATKAKEKLGW-KPEVSFEK  330 (343)
T ss_pred             hcCCHHHHHHhhCC-CCCCCHHH
Confidence            6789999999 999 998 8764

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02572 UDP-sulfoquinovose synthase

Probab=100.00  E-value=2.6e-42  Score=306.36  Aligned_cols=294  Identities=17%  Similarity=0.126  Sum_probs=210.4

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccc----h----------hhhhhcc-CccCceEEEEccCCCcc
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSK----V----------GFLWELN-GAEERLKIMKADLLMEG   65 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~----------~~~~~~~-~~~~~~~~~~~D~~d~~   65 (305)
                      ||+||||||+||||+||+++|+++|++|++++|.......    .          ..+.... ....+++++.+|+.|.+
T Consensus        47 ~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d~~  126 (442)
T PLN02572         47 KKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICDFE  126 (442)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCCHH
Confidence            5889999999999999999999999999998753211100    0          0010000 01236889999999999


Q ss_pred             hHHHHhc--CCCEEEEeccccccCCCC---chhhhhhhhhHHHHHHHHHHHHhcCCcc-EEEEeccceeeeccCCCCCCc
Q 039049           66 SFDEAIQ--GVDGVFHTASPVLVPYDN---NIQATLIDPCIKGTLNVLSSCKKAKSVK-RVVLTSSCSSIRYRHDAQQVS  139 (305)
Q Consensus        66 ~~~~~~~--~~d~Vi~~a~~~~~~~~~---~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~SS~~~~~~~~~~~~~~  139 (305)
                      .+.++++  ++|+|||+|+......+.   +.....+++|+.++.+++++|++. +++ +||++||..+|+.......+.
T Consensus       127 ~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~-gv~~~~V~~SS~~vYG~~~~~~~E~  205 (442)
T PLN02572        127 FLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEF-APDCHLVKLGTMGEYGTPNIDIEEG  205 (442)
T ss_pred             HHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHh-CCCccEEEEecceecCCCCCCCccc
Confidence            9999987  589999999875433222   223456789999999999999998 875 899999999987532100011


Q ss_pred             ccC------CCC---CCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCC------------
Q 039049          140 PLN------ESH---WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQP------------  198 (305)
Q Consensus       140 ~~~------E~~---~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~------------  198 (305)
                      +++      |++   +..|.      ++|+.||.++|.+++.++++++++++++||+++|||+.....            
T Consensus       206 ~i~~~~~~~e~~~~~~~~P~------s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~  279 (442)
T PLN02572        206 YITITHNGRTDTLPYPKQAS------SFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYD  279 (442)
T ss_pred             ccccccccccccccCCCCCC------CcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcc
Confidence            121      222   22232      789999999999999999899999999999999999864311            


Q ss_pred             ----CchHHHHHHHHhcCCCC-CCCC--CccceeHHHHHHHHHHhhccccc-C--ceEEEecCCcCHHHHHHHHHHh---
Q 039049          199 ----TSTLLLILAMVKGLRGE-YPNT--TVGFVHIDDVVGAHILAMEETRA-S--GRLICSSSVAHWSPIIEMLKAT---  265 (305)
Q Consensus       199 ----~~~~~~~~~~~~~~~~~-~~~~--~~~~i~v~D~a~~~~~~~~~~~~-~--~~~~~~~~~~s~~el~~~i~~~---  265 (305)
                          .....++..+..|+++. ++++  .|+|+||+|+|++++.++++... +  ..||++++.+|+.|+++.+.+.   
T Consensus       280 ~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs~~~si~el~~~i~~~~~~  359 (442)
T PLN02572        280 GVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFTEQFSVNELAKLVTKAGEK  359 (442)
T ss_pred             cchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCCCceeHHHHHHHHHHHHHh
Confidence                12234556666676643 4444  89999999999999999987533 3  3689877789999999999998   


Q ss_pred             CCCC-CCCCCC-CCCCCCCCCcccchhHHHHhCCCcccc
Q 039049          266 YPSY-PYESKC-SKQEGDNSPHSMDTSKLFELGFVGFKS  302 (305)
Q Consensus       266 ~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~lg~~~~~~  302 (305)
                      +|.. .+...+ ...+.....+..|++|+++||| +|+.
T Consensus       360 ~g~~~~~~~~p~~~~~~~~~~~~~d~~k~~~LGw-~p~~  397 (442)
T PLN02572        360 LGLDVEVISVPNPRVEAEEHYYNAKHTKLCELGL-EPHL  397 (442)
T ss_pred             hCCCCCeeeCCCCcccccccccCccHHHHHHcCC-CCCC
Confidence            7632 211111 1123333456789999987999 8873

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=100.00  E-value=3.4e-42  Score=300.28  Aligned_cols=286  Identities=18%  Similarity=0.174  Sum_probs=213.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      |+|||||||||||++|++.|+++||+|++++|........        .....+++.+|+.|.+.+.+++.++|+|||+|
T Consensus        22 ~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~--------~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~A   93 (370)
T PLN02695         22 LRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSE--------DMFCHEFHLVDLRVMENCLKVTKGVDHVFNLA   93 (370)
T ss_pred             CEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccccc--------ccccceEEECCCCCHHHHHHHHhCCCEEEEcc
Confidence            7899999999999999999999999999999865321110        01135778899999988888888999999999


Q ss_pred             cccccCC-CCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCC--CCCcccccccchh
Q 039049           82 SPVLVPY-DNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH--WSDPDYCKHYNLW  158 (305)
Q Consensus        82 ~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~--~~~~~~~~~~~~~  158 (305)
                      +...... ....+...++.|+.++.+++++|++. ++++|||+||.++|+.........++.|++  +..|.      +.
T Consensus        94 a~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~-~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~------s~  166 (370)
T PLN02695         94 ADMGGMGFIQSNHSVIMYNNTMISFNMLEAARIN-GVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQ------DA  166 (370)
T ss_pred             cccCCccccccCchhhHHHHHHHHHHHHHHHHHh-CCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCC------CH
Confidence            9764321 12233446788999999999999988 899999999999887643211123466655  34444      78


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCC---CchHHHHHHHHhc-CCCC-CCC--CCccceeHHHHHH
Q 039049          159 YAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQP---TSTLLLILAMVKG-LRGE-YPN--TTVGFVHIDDVVG  231 (305)
Q Consensus       159 Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~---~~~~~~~~~~~~~-~~~~-~~~--~~~~~i~v~D~a~  231 (305)
                      |+.+|.++|++++.+..+++++++++||+++|||+.....   .....++..+... .++. +++  +.++|+|++|+++
T Consensus       167 Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~  246 (370)
T PLN02695        167 YGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVE  246 (370)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHH
Confidence            9999999999999998888999999999999999754321   1233455555543 3332 343  4899999999999


Q ss_pred             HHHHhhcccccCceEEEe-cCCcCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCcccchhHHHH-hCCCccc-cCCC
Q 039049          232 AHILAMEETRASGRLICS-SSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lg~~~~~-~l~e  305 (305)
                      +++.+++.. .++.||++ ++.+|++|+++.+.+..|.. .+......+.......+|++|+++ ||| +|+ +|+|
T Consensus       247 ai~~~~~~~-~~~~~nv~~~~~~s~~el~~~i~~~~g~~-~~i~~~~~~~~~~~~~~d~sk~~~~lgw-~p~~~l~e  320 (370)
T PLN02695        247 GVLRLTKSD-FREPVNIGSDEMVSMNEMAEIALSFENKK-LPIKHIPGPEGVRGRNSDNTLIKEKLGW-APTMRLKD  320 (370)
T ss_pred             HHHHHHhcc-CCCceEecCCCceeHHHHHHHHHHHhCCC-CCceecCCCCCccccccCHHHHHHhcCC-CCCCCHHH
Confidence            999988764 35679996 67899999999999988742 121111112222345689999999 999 998 7754

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=1.5e-41  Score=295.65  Aligned_cols=298  Identities=39%  Similarity=0.640  Sum_probs=211.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      |+||||||+||||++++++|+++|++|++++|+.......  ..... ...+++++.+|+.|.+.+.++++++|+|||+|
T Consensus        11 ~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~--~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A   87 (353)
T PLN02896         11 GTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHL--LSKWK-EGDRLRLFRADLQEEGSFDEAVKGCDGVFHVA   87 (353)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHH--HHhhc-cCCeEEEEECCCCCHHHHHHHHcCCCEEEECC
Confidence            6899999999999999999999999999999875432211  11111 13468899999999999999999999999999


Q ss_pred             cccccCC--CCchhhh-----hhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCC-CCcccCCCCCCCccc--
Q 039049           82 SPVLVPY--DNNIQAT-----LIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQ-QVSPLNESHWSDPDY--  151 (305)
Q Consensus        82 ~~~~~~~--~~~~~~~-----~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~-~~~~~~E~~~~~~~~--  151 (305)
                      +......  ....+..     .++.|+.++.+++++|++..++++||++||.++|+...... ...+++|+.+ .|..  
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~-~p~~~~  166 (353)
T PLN02896         88 ASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQ-TPIDHV  166 (353)
T ss_pred             ccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccC-CcHHHh
Confidence            9865432  1223332     34556799999999998873478999999999887542210 0135666532 1110  


Q ss_pred             --ccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCC--------CCCc
Q 039049          152 --CKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYP--------NTTV  221 (305)
Q Consensus       152 --~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~  221 (305)
                        ...+.++|+.||.++|.+++.++++++++++++||+++|||+...........+.....+.....+        .+.+
T Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  246 (353)
T PLN02896        167 WNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRMGSI  246 (353)
T ss_pred             hccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccccccCce
Confidence              011125799999999999999998899999999999999998654333222222222234322111        1146


Q ss_pred             cceeHHHHHHHHHHhhcccccCceEEEecCCcCHHHHHHHHHHhCCCCCCCCCC-CCCCCCCCCcccchhHHHHhCCCcc
Q 039049          222 GFVHIDDVVGAHILAMEETRASGRLICSSSVAHWSPIIEMLKATYPSYPYESKC-SKQEGDNSPHSMDTSKLFELGFVGF  300 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~lg~~~~  300 (305)
                      +|||++|+|++++.+++.+..++.|++++..+|+.|+++.+.+.++........ .....+. ...+|++++++||| +|
T Consensus       247 dfi~v~Dva~a~~~~l~~~~~~~~~~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~lGw-~p  324 (353)
T PLN02896        247 ALVHIEDICDAHIFLMEQTKAEGRYICCVDSYDMSELINHLSKEYPCSNIQVRLDEEKRGSI-PSEISSKKLRDLGF-EY  324 (353)
T ss_pred             eEEeHHHHHHHHHHHHhCCCcCccEEecCCCCCHHHHHHHHHHhCCCCCccccccccccCcc-ccccCHHHHHHcCC-Cc
Confidence            999999999999999987655667887888999999999999998743222111 1112222 34668888877999 99


Q ss_pred             c-cCCC
Q 039049          301 K-SVPQ  305 (305)
Q Consensus       301 ~-~l~e  305 (305)
                      + +|+|
T Consensus       325 ~~~l~~  330 (353)
T PLN02896        325 KYGIEE  330 (353)
T ss_pred             cCCHHH
Confidence            8 8764

>PLN02206 UDP-glucuronate decarboxylase

Probab=100.00  E-value=8.4e-42  Score=302.31  Aligned_cols=286  Identities=20%  Similarity=0.247  Sum_probs=213.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      |||||||||||||++|++.|+++|++|++++|.......  .+... ....+++++.+|+.+.     ++.++|+|||+|
T Consensus       120 ~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~--~~~~~-~~~~~~~~i~~D~~~~-----~l~~~D~ViHlA  191 (442)
T PLN02206        120 LRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKE--NVMHH-FSNPNFELIRHDVVEP-----ILLEVDQIYHLA  191 (442)
T ss_pred             CEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchh--hhhhh-ccCCceEEEECCccCh-----hhcCCCEEEEee
Confidence            689999999999999999999999999999875322111  01000 1123678888998764     345799999999


Q ss_pred             cccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHHH
Q 039049           82 SPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAY  161 (305)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~  161 (305)
                      +...+..+..++...+++|+.++.+|+++|++. ++ +|||+||+.+|+....    .+.+|+.+....+.. +.+.|+.
T Consensus       192 a~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~-g~-r~V~~SS~~VYg~~~~----~p~~E~~~~~~~P~~-~~s~Y~~  264 (442)
T PLN02206        192 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GA-RFLLTSTSEVYGDPLQ----HPQVETYWGNVNPIG-VRSCYDE  264 (442)
T ss_pred             eecchhhhhcCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEECChHHhCCCCC----CCCCccccccCCCCC-ccchHHH
Confidence            987654344456778999999999999999998 75 8999999999875422    456666432111111 1167999


Q ss_pred             HHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCC-CchHHHHHHHHhcCCCC-CCCC--CccceeHHHHHHHHHHhh
Q 039049          162 AKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQP-TSTLLLILAMVKGLRGE-YPNT--TVGFVHIDDVVGAHILAM  237 (305)
Q Consensus       162 sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~--~~~~i~v~D~a~~~~~~~  237 (305)
                      +|.++|++++.+.++++++++++||+++|||+..... .....++..+..++++. ++++  .++|+|++|+|++++.++
T Consensus       265 SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~  344 (442)
T PLN02206        265 GKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLM  344 (442)
T ss_pred             HHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHH
Confidence            9999999999998888999999999999999754322 23345667777766654 3444  789999999999999998


Q ss_pred             cccccCceEEEe-cCCcCHHHHHHHHHHhCCCC-CCCCCCCCCCCCCCCcccchhHHHH-hCCCccc-cCCC
Q 039049          238 EETRASGRLICS-SSVAHWSPIIEMLKATYPSY-PYESKCSKQEGDNSPHSMDTSKLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       238 ~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-lg~~~~~-~l~e  305 (305)
                      ++. ..+.||++ ++.+|+.|+++.+.+.++.. .+.. ......+.....+|++|+++ ||| +|+ +|+|
T Consensus       345 e~~-~~g~yNIgs~~~~sl~Elae~i~~~~g~~~~i~~-~p~~~~~~~~~~~d~sKa~~~LGw-~P~~~l~e  413 (442)
T PLN02206        345 EGE-HVGPFNLGNPGEFTMLELAKVVQETIDPNAKIEF-RPNTEDDPHKRKPDITKAKELLGW-EPKVSLRQ  413 (442)
T ss_pred             hcC-CCceEEEcCCCceeHHHHHHHHHHHhCCCCceee-CCCCCCCccccccCHHHHHHHcCC-CCCCCHHH
Confidence            865 45689996 67899999999999998632 2221 11223345567889999999 999 998 8764

>PLN02686 cinnamoyl-CoA reductase

Probab=100.00  E-value=3.8e-41  Score=293.43  Aligned_cols=300  Identities=26%  Similarity=0.390  Sum_probs=217.3

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccC---ccCceEEEEccCCCcchHHHHhcCCCEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNG---AEERLKIMKADLLMEGSFDEAIQGVDGV   77 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~d~~~~~~~~~~~d~V   77 (305)
                      ||+||||||+||||++|++.|+++|++|++++|+.+.......+.....   ...++.++.+|+.|.+.+.++++++|+|
T Consensus        53 ~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~~d~V  132 (367)
T PLN02686         53 ARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDGCAGV  132 (367)
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHhccEE
Confidence            5789999999999999999999999999999887543222211111000   0125788999999999999999999999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccce--eeeccCCCCCCcccCCCCCCCccccccc
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCS--SIRYRHDAQQVSPLNESHWSDPDYCKHY  155 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~--~~~~~~~~~~~~~~~E~~~~~~~~~~~~  155 (305)
                      ||+|+...............+.|+.++.+++++|++..+++||||+||..  +|+.........+++|+.+.....+..+
T Consensus       133 ~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~~~~p  212 (367)
T PLN02686        133 FHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFCRDN  212 (367)
T ss_pred             EecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhhcccc
Confidence            99999875432222223456889999999999998753799999999963  4542111100123566654332222222


Q ss_pred             chhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHH
Q 039049          156 NLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHIL  235 (305)
Q Consensus       156 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  235 (305)
                      .++|+.||.++|.+++.++++++++++++||+++|||+.......   .+.....+....++++..+|+||+|+|++++.
T Consensus       213 ~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~---~~~~~~~g~~~~~g~g~~~~v~V~Dva~A~~~  289 (367)
T PLN02686        213 KLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNST---ATIAYLKGAQEMLADGLLATADVERLAEAHVC  289 (367)
T ss_pred             cchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCCh---hHHHHhcCCCccCCCCCcCeEEHHHHHHHHHH
Confidence            367999999999999999888899999999999999975432211   12234455444556677789999999999999


Q ss_pred             hhccc---ccCceEEEecCCcCHHHHHHHHHHhCCCCCCCCCCCCC-CCCCCCcccchhHHHH-hCCCccc-cCC
Q 039049          236 AMEET---RASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQ-EGDNSPHSMDTSKLFE-LGFVGFK-SVP  304 (305)
Q Consensus       236 ~~~~~---~~~~~~~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-lg~~~~~-~l~  304 (305)
                      +++..   ..++.|++++..+++.|+++.+.+.+|..........+ +.+...+.+|++|+++ ||| +|+ ..+
T Consensus       290 al~~~~~~~~~~~yi~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~d~~~~~~d~~kl~~~l~~-~~~~~~~  363 (367)
T PLN02686        290 VYEAMGNKTAFGRYICFDHVVSREDEAEELARQIGLPINKIAGNSSSDDTPARFELSNKKLSRLMSR-TRRCCYD  363 (367)
T ss_pred             HHhccCCCCCCCcEEEeCCCccHHHHHHHHHHHcCCCCCcCCCchhhcCCcccccccHHHHHHHHHH-hhhcccc
Confidence            99853   33557866788999999999999999743212122223 5677889999999999 999 887 443

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=6.2e-42  Score=270.57  Aligned_cols=287  Identities=23%  Similarity=0.278  Sum_probs=231.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      ++|+||||.||||+|||+.|..+||+|++++-....-...  + ......++++.+.-|+.     ..++.++|.|+|+|
T Consensus        28 lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n--~-~~~~~~~~fel~~hdv~-----~pl~~evD~IyhLA   99 (350)
T KOG1429|consen   28 LRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKEN--L-EHWIGHPNFELIRHDVV-----EPLLKEVDQIYHLA   99 (350)
T ss_pred             cEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhh--c-chhccCcceeEEEeech-----hHHHHHhhhhhhhc
Confidence            5899999999999999999999999999997543211110  0 01111336666666654     45788999999999


Q ss_pred             cccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHHH
Q 039049           82 SPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAY  161 (305)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~  161 (305)
                      ++.++.....++...+..|+.++.+++-.|++. + +||+++||+.||++.-    ..|..|+-+..-.+.. +.+.|+.
T Consensus       100 apasp~~y~~npvktIktN~igtln~lglakrv-~-aR~l~aSTseVYgdp~----~hpq~e~ywg~vnpig-pr~cyde  172 (350)
T KOG1429|consen  100 APASPPHYKYNPVKTIKTNVIGTLNMLGLAKRV-G-ARFLLASTSEVYGDPL----VHPQVETYWGNVNPIG-PRSCYDE  172 (350)
T ss_pred             cCCCCcccccCccceeeecchhhHHHHHHHHHh-C-ceEEEeecccccCCcc----cCCCccccccccCcCC-chhhhhH
Confidence            999998888888889999999999999999998 6 8999999999998842    2566665543322211 1277999


Q ss_pred             HHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC-chHHHHHHHHhcCCCC-CCCC--CccceeHHHHHHHHHHhh
Q 039049          162 AKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPT-STLLLILAMVKGLRGE-YPNT--TVGFVHIDDVVGAHILAM  237 (305)
Q Consensus       162 sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~--~~~~i~v~D~a~~~~~~~  237 (305)
                      .|..+|.++..|+++.|+++.|.|+.++|||.-..... ....++.+.+++.++. ++++  .|+|+||+|++++++.++
T Consensus       173 gKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm  252 (350)
T KOG1429|consen  173 GKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLM  252 (350)
T ss_pred             HHHHHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHh
Confidence            99999999999999999999999999999998654443 3456778888888766 4555  899999999999999999


Q ss_pred             cccccCceEEEe-cCCcCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCcccchhHHHH-hCCCccc-cCCC
Q 039049          238 EETRASGRLICS-SSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       238 ~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lg~~~~~-~l~e  305 (305)
                      +++..+. +|++ .+.+|+.||++++.+..+....+......+.++.....|++++++ ||| +|+ +|+|
T Consensus       253 ~s~~~~p-vNiGnp~e~Tm~elAemv~~~~~~~s~i~~~~~~~Ddp~kR~pDit~ake~LgW-~Pkv~L~e  321 (350)
T KOG1429|consen  253 ESDYRGP-VNIGNPGEFTMLELAEMVKELIGPVSEIEFVENGPDDPRKRKPDITKAKEQLGW-EPKVSLRE  321 (350)
T ss_pred             cCCCcCC-cccCCccceeHHHHHHHHHHHcCCCcceeecCCCCCCccccCccHHHHHHHhCC-CCCCcHHH
Confidence            9876644 8886 579999999999999997666666666678888999999999999 999 999 8865

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=100.00  E-value=1.4e-41  Score=316.49  Aligned_cols=291  Identities=17%  Similarity=0.201  Sum_probs=219.1

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHc-CCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcch-HHHHhcCCCEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDK-GHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGS-FDEAIQGVDGVF   78 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~-~~~~~~~~d~Vi   78 (305)
                      ||+|||||||||||+||++.|++. ||+|++++|.......   +   . ..++++++.+|+.|.+. +.++++++|+||
T Consensus       315 ~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~---~---~-~~~~~~~~~gDl~d~~~~l~~~l~~~D~Vi  387 (660)
T PRK08125        315 RTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISR---F---L-GHPRFHFVEGDISIHSEWIEYHIKKCDVVL  387 (660)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhh---h---c-CCCceEEEeccccCcHHHHHHHhcCCCEEE
Confidence            588999999999999999999985 7999999997642211   1   0 12368899999998655 567888999999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCccccc-ccch
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCK-HYNL  157 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~-~~~~  157 (305)
                      |+||...+..+...+...+++|+.++.+++++|++. + ++|||+||.++|+...    ..+++|+++..+..+. .+.+
T Consensus       388 HlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~-~-~~~V~~SS~~vyg~~~----~~~~~E~~~~~~~~p~~~p~s  461 (660)
T PRK08125        388 PLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKY-N-KRIIFPSTSEVYGMCT----DKYFDEDTSNLIVGPINKQRW  461 (660)
T ss_pred             ECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhc-C-CeEEEEcchhhcCCCC----CCCcCccccccccCCCCCCcc
Confidence            999987754444455668899999999999999998 7 8999999999887532    2467787754221111 1125


Q ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCC-------CCchHHHHHHHHhcCCCC-CCC--CCccceeHH
Q 039049          158 WYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQ-------PTSTLLLILAMVKGLRGE-YPN--TTVGFVHID  227 (305)
Q Consensus       158 ~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~-~~~--~~~~~i~v~  227 (305)
                      .|+.||.++|.+++.+++.++++++++||+++|||+....       ......++..+..++++. .++  +.++|+|++
T Consensus       462 ~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~  541 (660)
T PRK08125        462 IYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIR  541 (660)
T ss_pred             chHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHH
Confidence            7999999999999999888899999999999999975421       123455667777666653 333  489999999


Q ss_pred             HHHHHHHHhhcccc---cCceEEEec-C-CcCHHHHHHHHHHhCCCCCC----CCCC-C----------CCCCCCCCccc
Q 039049          228 DVVGAHILAMEETR---ASGRLICSS-S-VAHWSPIIEMLKATYPSYPY----ESKC-S----------KQEGDNSPHSM  287 (305)
Q Consensus       228 D~a~~~~~~~~~~~---~~~~~~~~~-~-~~s~~el~~~i~~~~~~~~~----~~~~-~----------~~~~~~~~~~~  287 (305)
                      |+|++++.+++++.   .++.||+++ + .+|++|+++.+.+.+|..+.    +... .          ....+...+..
T Consensus       542 Dva~a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  621 (660)
T PRK08125        542 DGIEALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPLRDHFPPFAGFRVVESSSYYGKGYQDVEHRKP  621 (660)
T ss_pred             HHHHHHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccCcccccCCccccccccccccccccccccccccCC
Confidence            99999999998753   255799964 4 69999999999999874221    1110 0          01123345568


Q ss_pred             chhHHHH-hCCCccc-cCCC
Q 039049          288 DTSKLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       288 ~~~~~~~-lg~~~~~-~l~e  305 (305)
                      |++|+++ ||| +|+ +|+|
T Consensus       622 d~~ka~~~LGw-~P~~~lee  640 (660)
T PRK08125        622 SIRNARRLLDW-EPKIDMQE  640 (660)
T ss_pred             ChHHHHHHhCC-CCCCcHHH
Confidence            9999999 999 988 8764

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=100.00  E-value=6.5e-42  Score=270.55  Aligned_cols=291  Identities=16%  Similarity=0.159  Sum_probs=231.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC--CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG--HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGV   77 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~V   77 (305)
                      ++++||||.||||++.+..+...-  ++.+.+..=.-.. .+..+... ...++..++++|+.+...+..++.  ++|.|
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s-~~~~l~~~-~n~p~ykfv~~di~~~~~~~~~~~~~~id~v   84 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCS-NLKNLEPV-RNSPNYKFVEGDIADADLVLYLFETEEIDTV   84 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeeccccc-ccchhhhh-ccCCCceEeeccccchHHHHhhhccCchhhh
Confidence            579999999999999999998763  4555443211000 01111111 124589999999999888888875  78999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccch
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNL  157 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  157 (305)
                      ||+|+..+...+..++......|+.++..|++.++..+++++|||+||..|||+....   ....|.+.++|.      +
T Consensus        85 ihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~---~~~~E~s~~nPt------n  155 (331)
T KOG0747|consen   85 IHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDED---AVVGEASLLNPT------N  155 (331)
T ss_pred             hhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCcccc---ccccccccCCCC------C
Confidence            9999999988888888889999999999999999998889999999999999987553   333489999998      9


Q ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCC-CCCC--CccceeHHHHHHHHH
Q 039049          158 WYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGE-YPNT--TVGFVHIDDVVGAHI  234 (305)
Q Consensus       158 ~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~i~v~D~a~~~~  234 (305)
                      +|+.+|+++|..+++|.++++++++++|.++||||++.+. ..++.++.....+.+.. .+++  .|+|+|++|+++++.
T Consensus       156 pyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~-klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~  234 (331)
T KOG0747|consen  156 PYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPE-KLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFK  234 (331)
T ss_pred             chHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcChH-HHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHH
Confidence            9999999999999999999999999999999999986542 34456666555565544 4555  899999999999999


Q ss_pred             HhhcccccCceEEEe-cCCcCHHHHHHHHHHhCCC----C---CCCCCCCCCCCCCCCcccchhHHHHhCCCccc-cCCC
Q 039049          235 LAMEETRASGRLICS-SSVAHWSPIIEMLKATYPS----Y---PYESKCSKQEGDNSPHSMDTSKLFELGFVGFK-SVPQ  305 (305)
Q Consensus       235 ~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~-~l~e  305 (305)
                      .+++....+.+||++ ..+.+..|+++.+.+.+..    .   +.+.....++.....+.++.+|++.||| +|+ +|+|
T Consensus       235 ~v~~Kg~~geIYNIgtd~e~~~~~l~k~i~eli~~~~~~~~~~p~~~~v~dRp~nd~Ry~~~~eKik~LGw-~~~~p~~e  313 (331)
T KOG0747|consen  235 AVLEKGELGEIYNIGTDDEMRVIDLAKDICELFEKRLPNIDTEPFIFFVEDRPYNDLRYFLDDEKIKKLGW-RPTTPWEE  313 (331)
T ss_pred             HHHhcCCccceeeccCcchhhHHHHHHHHHHHHHHhccCCCCCCcceecCCCCcccccccccHHHHHhcCC-cccCcHHH
Confidence            999997778899995 6799999999999887632    1   2222334466666779999999999999 998 8764

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=3.7e-41  Score=291.89  Aligned_cols=291  Identities=18%  Similarity=0.128  Sum_probs=221.1

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcc--cchhhhhh-ccCccCceEEEEccCCCcchHHHHhc--CCC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDL--SKVGFLWE-LNGAEERLKIMKADLLMEGSFDEAIQ--GVD   75 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~--~~~~~~~~-~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d   75 (305)
                      +|+||||||+||||++|++.|+++|++|+++.|+....  .....+.. ......+++++.+|+.|.+.+.++++  ++|
T Consensus         6 ~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   85 (340)
T PLN02653          6 RKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIKPD   85 (340)
T ss_pred             CCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcCCC
Confidence            47899999999999999999999999999999875421  11111110 01112368899999999999999887  469


Q ss_pred             EEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCcc-----EEEEeccceeeeccCCCCCCcccCCCCCCCcc
Q 039049           76 GVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVK-----RVVLTSSCSSIRYRHDAQQVSPLNESHWSDPD  150 (305)
Q Consensus        76 ~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~  150 (305)
                      +|||+|+..........+...+++|+.++.+++++|++. +++     +||++||+++|+...     .+++|+++..|.
T Consensus        86 ~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-~~~~~~~~~~v~~Ss~~vyg~~~-----~~~~E~~~~~p~  159 (340)
T PLN02653         86 EVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLH-GQETGRQIKYYQAGSSEMYGSTP-----PPQSETTPFHPR  159 (340)
T ss_pred             EEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHh-ccccccceeEEEeccHHHhCCCC-----CCCCCCCCCCCC
Confidence            999999986654344455667899999999999999988 664     899999999887542     367888887776


Q ss_pred             cccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC--chHHHHHHHHhcCCCC--CCCC--Cccce
Q 039049          151 YCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPT--STLLLILAMVKGLRGE--YPNT--TVGFV  224 (305)
Q Consensus       151 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~--~~~~i  224 (305)
                            +.|+.||.++|.+++.++.+++++++..|+.++|||+......  ....++..+..+.+..  .+++  .++|+
T Consensus       160 ------~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i  233 (340)
T PLN02653        160 ------SPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWG  233 (340)
T ss_pred             ------ChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecce
Confidence                  8899999999999999998899999999999999997543211  1122344445555432  2433  89999


Q ss_pred             eHHHHHHHHHHhhcccccCceEEEe-cCCcCHHHHHHHHHHhCCCC---CCCCCC-CCCCCCCCCcccchhHHHH-hCCC
Q 039049          225 HIDDVVGAHILAMEETRASGRLICS-SSVAHWSPIIEMLKATYPSY---PYESKC-SKQEGDNSPHSMDTSKLFE-LGFV  298 (305)
Q Consensus       225 ~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~-lg~~  298 (305)
                      |++|+|++++.++++.. ++.||++ ++.+|++|+++.+.+.+|..   .+.... ...+........|++|+++ ||| 
T Consensus       234 ~v~D~a~a~~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw-  311 (340)
T PLN02653        234 FAGDYVEAMWLMLQQEK-PDDYVVATEESHTVEEFLEEAFGYVGLNWKDHVEIDPRYFRPAEVDNLKGDASKAREVLGW-  311 (340)
T ss_pred             eHHHHHHHHHHHHhcCC-CCcEEecCCCceeHHHHHHHHHHHcCCCCCcceeeCcccCCccccccccCCHHHHHHHhCC-
Confidence            99999999999998753 5679995 77899999999999999742   111111 1134455566789999999 999 


Q ss_pred             ccc-cCCC
Q 039049          299 GFK-SVPQ  305 (305)
Q Consensus       299 ~~~-~l~e  305 (305)
                      +|+ +|+|
T Consensus       312 ~p~~~l~~  319 (340)
T PLN02653        312 KPKVGFEQ  319 (340)
T ss_pred             CCCCCHHH
Confidence            998 8764

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=100.00  E-value=5.5e-41  Score=285.09  Aligned_cols=264  Identities=13%  Similarity=0.042  Sum_probs=204.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi~   79 (305)
                      |+||||||+||||++|++.|+++| +|++++|...                   .+.+|+.|.+.+.++++  ++|+|||
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-------------------~~~~Dl~d~~~~~~~~~~~~~D~Vih   60 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST-------------------DYCGDFSNPEGVAETVRKIRPDVIVN   60 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-------------------cccCCCCCHHHHHHHHHhcCCCEEEE
Confidence            579999999999999999999999 7998877531                   23589999999999887  5899999


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhH
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWY  159 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y  159 (305)
                      ||+......+...+...+++|+.++.+++++|++. ++ +|||+||..||++..    ..|++|++++.|.      +.|
T Consensus        61 ~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~-g~-~~v~~Ss~~Vy~~~~----~~p~~E~~~~~P~------~~Y  128 (299)
T PRK09987         61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEV-GA-WVVHYSTDYVFPGTG----DIPWQETDATAPL------NVY  128 (299)
T ss_pred             CCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEccceEECCCC----CCCcCCCCCCCCC------CHH
Confidence            99998765555566778899999999999999998 75 799999999987642    2588999988887      889


Q ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCC-CCC----CCccceeHHHHHHHHH
Q 039049          160 AYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGE-YPN----TTVGFVHIDDVVGAHI  234 (305)
Q Consensus       160 ~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~i~v~D~a~~~~  234 (305)
                      +.+|.++|++++.+.    .+.+++|++++|||+..   .....++..+..++++. +++    ..+++.+++|++.++.
T Consensus       129 g~sK~~~E~~~~~~~----~~~~ilR~~~vyGp~~~---~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~  201 (299)
T PRK09987        129 GETKLAGEKALQEHC----AKHLIFRTSWVYAGKGN---NFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIR  201 (299)
T ss_pred             HHHHHHHHHHHHHhC----CCEEEEecceecCCCCC---CHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHH
Confidence            999999999987653    46799999999999642   23344555555565543 333    2456667778888888


Q ss_pred             HhhcccccCceEEEe-cCCcCHHHHHHHHHHhCCCC--CC------CC---CCCCCCCCCCCcccchhHHHH-hCCCccc
Q 039049          235 LAMEETRASGRLICS-SSVAHWSPIIEMLKATYPSY--PY------ES---KCSKQEGDNSPHSMDTSKLFE-LGFVGFK  301 (305)
Q Consensus       235 ~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~--~~------~~---~~~~~~~~~~~~~~~~~~~~~-lg~~~~~  301 (305)
                      .+++.+...+.||++ ++.+|+.|+++.+.+.++..  ..      +.   .......++....+|++|+++ ||| +|+
T Consensus       202 ~~~~~~~~~giyni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~i~~~~~~~~~~~~~rp~~~~ld~~k~~~~lg~-~~~  280 (299)
T PRK09987        202 VALNKPEVAGLYHLVASGTTTWHDYAALVFEEARKAGITLALNKLNAVPTSAYPTPARRPHNSRLNTEKFQQNFAL-VLP  280 (299)
T ss_pred             HhhccCCCCCeEEeeCCCCccHHHHHHHHHHHHHhcCCCcCcCeeeecchhhcCCCCCCCCcccCCHHHHHHHhCC-CCc
Confidence            887665555799996 67899999999998764321  11      10   011234456678999999999 999 887


Q ss_pred             cCCC
Q 039049          302 SVPQ  305 (305)
Q Consensus       302 ~l~e  305 (305)
                      +|+|
T Consensus       281 ~~~~  284 (299)
T PRK09987        281 DWQV  284 (299)
T ss_pred             cHHH
Confidence            7764

>PLN02583 cinnamoyl-CoA reductase

Probab=100.00  E-value=4.8e-40  Score=279.19  Aligned_cols=288  Identities=28%  Similarity=0.500  Sum_probs=214.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      ++|+||||+||||+++++.|+++|++|++++|+.........+........+++++++|+.|.+.+.+++.++|.|+|++
T Consensus         7 k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~~~   86 (297)
T PLN02583          7 KSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFCCF   86 (297)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEEeC
Confidence            67999999999999999999999999999999643222111122221123468899999999999999999999999987


Q ss_pred             cccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeecc-CCCCCCcccCCCCCCCcccccccchhHH
Q 039049           82 SPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYR-HDAQQVSPLNESHWSDPDYCKHYNLWYA  160 (305)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~-~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  160 (305)
                      +.....  .......+++|+.++.+++++|.+..+++|||++||.++++.. .......+++|+++..+........+|+
T Consensus        87 ~~~~~~--~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  164 (297)
T PLN02583         87 DPPSDY--PSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHA  164 (297)
T ss_pred             ccCCcc--cccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHH
Confidence            654321  1234568999999999999999876357899999998776422 1111124678887655443222223799


Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhccc
Q 039049          161 YAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       161 ~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  240 (305)
                      .||.++|+.++.++++.+++++++||++||||......        ....+.....+.+..+||||+|+|++++.+++.+
T Consensus       165 ~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~--------~~~~~~~~~~~~~~~~~v~V~Dva~a~~~al~~~  236 (297)
T PLN02583        165 LAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHN--------PYLKGAAQMYENGVLVTVDVNFLVDAHIRAFEDV  236 (297)
T ss_pred             HHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCch--------hhhcCCcccCcccCcceEEHHHHHHHHHHHhcCc
Confidence            99999999999998888999999999999999754321        1222322333455678999999999999999988


Q ss_pred             ccCceEEEecCCcC-HHHHHHHHHHhCCCCCCCCCCCCCCCCCCCcccchhHHHHhCCCcc
Q 039049          241 RASGRLICSSSVAH-WSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELGFVGF  300 (305)
Q Consensus       241 ~~~~~~~~~~~~~s-~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~  300 (305)
                      ..++.|+++++..+ ..++++++.+.+|..+++..............++++|+++||+ ++
T Consensus       237 ~~~~r~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~-~~  296 (297)
T PLN02583        237 SSYGRYLCFNHIVNTEEDAVKLAQMLSPLIPSPPPYEMQGSEVYQQRIRNKKLNKLME-DF  296 (297)
T ss_pred             ccCCcEEEecCCCccHHHHHHHHHHhCCCCCCCCcccccCCCccccccChHHHHHhCc-cc
Confidence            77788999877555 6789999999999877764322111223457899999999998 75

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=100.00  E-value=1.1e-40  Score=290.57  Aligned_cols=294  Identities=19%  Similarity=0.225  Sum_probs=217.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCe-EEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHM-VRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi   78 (305)
                      ||||||||+||||++|++.|+++|++ |+++.+..... ....+.... ...+++++.+|+.|.+++.++++  ++|+||
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   78 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAG-NLESLADVS-DSERYVFEHADICDRAELDRIFAQHQPDAVM   78 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccc-hHHHHHhcc-cCCceEEEEecCCCHHHHHHHHHhcCCCEEE
Confidence            57999999999999999999999976 55554432100 111111111 12357889999999999999987  489999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhc--------CCccEEEEeccceeeeccCCCC------CCcccCCC
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKA--------KSVKRVVLTSSCSSIRYRHDAQ------QVSPLNES  144 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--------~~~~~~v~~SS~~~~~~~~~~~------~~~~~~E~  144 (305)
                      |+|+..........+..++++|+.++.+++++|++.        +++++|||+||.++|+......      ...+++|+
T Consensus        79 h~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~  158 (352)
T PRK10084         79 HLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTET  158 (352)
T ss_pred             ECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCcccc
Confidence            999986543333455778999999999999999863        2467999999999887532110      00246787


Q ss_pred             CCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCC-CC--CCCc
Q 039049          145 HWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGE-YP--NTTV  221 (305)
Q Consensus       145 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~  221 (305)
                      ++..|.      +.|+.||.++|.+++.+++.++++++++|++++|||+.... .....++..+..+..+. ++  +..+
T Consensus       159 ~~~~p~------~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~  231 (352)
T PRK10084        159 TAYAPS------SPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQIR  231 (352)
T ss_pred             CCCCCC------ChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCcc-chHHHHHHHHhcCCCeEEeCCCCeEE
Confidence            777666      78999999999999999888999999999999999985332 23444556666665533 34  4489


Q ss_pred             cceeHHHHHHHHHHhhcccccCceEEEe-cCCcCHHHHHHHHHHhCCCC-CC--CC--C---CCCCCCCCCCcccchhHH
Q 039049          222 GFVHIDDVVGAHILAMEETRASGRLICS-SSVAHWSPIIEMLKATYPSY-PY--ES--K---CSKQEGDNSPHSMDTSKL  292 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~-~~--~~--~---~~~~~~~~~~~~~~~~~~  292 (305)
                      +|+|++|+|+++..++++...++.||++ ++..|+.|+++.+++.++.. +.  +.  .   ...+......+.+|++|+
T Consensus       232 ~~v~v~D~a~a~~~~l~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~k~  311 (352)
T PRK10084        232 DWLYVEDHARALYKVVTEGKAGETYNIGGHNEKKNLDVVLTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDASKI  311 (352)
T ss_pred             eeEEHHHHHHHHHHHHhcCCCCceEEeCCCCcCcHHHHHHHHHHHhccccccccchhhhccccccCCCCCceeeeCHHHH
Confidence            9999999999999999876667789996 67899999999999998642 11  10  0   111233344567899999


Q ss_pred             HH-hCCCccc-cCCC
Q 039049          293 FE-LGFVGFK-SVPQ  305 (305)
Q Consensus       293 ~~-lg~~~~~-~l~e  305 (305)
                      ++ ||| +|+ +|+|
T Consensus       312 ~~~lg~-~p~~~l~~  325 (352)
T PRK10084        312 SRELGW-KPQETFES  325 (352)
T ss_pred             HHHcCC-CCcCCHHH
Confidence            99 999 997 7753

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=100.00  E-value=1.2e-40  Score=311.91  Aligned_cols=294  Identities=17%  Similarity=0.172  Sum_probs=221.6

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHc--CCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHh--cCCCE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDK--GHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAI--QGVDG   76 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~--~~~d~   76 (305)
                      +|+|||||||||||++|++.|+++  |++|++++|..... ....+... ....+++++.+|+.|.+.+.+++  .++|+
T Consensus         6 ~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~-~~~~l~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~   83 (668)
T PLN02260          6 PKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCS-NLKNLNPS-KSSPNFKFVKGDIASADLVNYLLITEGIDT   83 (668)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccc-hhhhhhhc-ccCCCeEEEECCCCChHHHHHHHhhcCCCE
Confidence            479999999999999999999988  68999998753111 11111110 11247899999999988887766  57999


Q ss_pred             EEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccc
Q 039049           77 VFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYN  156 (305)
Q Consensus        77 Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  156 (305)
                      |||+|+..........+..++++|+.++.+++++|++.+.+++|||+||..+|+...... ..+..|+++..|.      
T Consensus        84 ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~-~~~~~E~~~~~p~------  156 (668)
T PLN02260         84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDA-DVGNHEASQLLPT------  156 (668)
T ss_pred             EEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCcccc-ccCccccCCCCCC------
Confidence            999999876544444556688999999999999999983389999999999987643210 0224566666665      


Q ss_pred             hhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCC-CC--CCccceeHHHHHHHH
Q 039049          157 LWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEY-PN--TTVGFVHIDDVVGAH  233 (305)
Q Consensus       157 ~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~i~v~D~a~~~  233 (305)
                      +.|+.+|..+|.+++.+.++++++++++||+++|||+.... .....++..+..+.++.+ ++  ..++|+|++|+|+++
T Consensus       157 ~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~-~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~  235 (668)
T PLN02260        157 NPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE-KLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAF  235 (668)
T ss_pred             CCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcc-cHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHH
Confidence            78999999999999999888899999999999999986432 233445556666665443 33  379999999999999


Q ss_pred             HHhhcccccCceEEEe-cCCcCHHHHHHHHHHhCCCCCCC--CCCCCCCCCCCCcccchhHHHHhCCCccc-cCCC
Q 039049          234 ILAMEETRASGRLICS-SSVAHWSPIIEMLKATYPSYPYE--SKCSKQEGDNSPHSMDTSKLFELGFVGFK-SVPQ  305 (305)
Q Consensus       234 ~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~lg~~~~~-~l~e  305 (305)
                      ..+++....++.||++ ++.+|+.|+++.+.+.+|.....  .....++.....+.+|++|+++||| +|+ +|+|
T Consensus       236 ~~~l~~~~~~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~i~~~~~~p~~~~~~~~d~~k~~~lGw-~p~~~~~e  310 (668)
T PLN02260        236 EVVLHKGEVGHVYNIGTKKERRVIDVAKDICKLFGLDPEKSIKFVENRPFNDQRYFLDDQKLKKLGW-QERTSWEE  310 (668)
T ss_pred             HHHHhcCCCCCEEEECCCCeeEHHHHHHHHHHHhCCCCcceeeecCCCCCCcceeecCHHHHHHcCC-CCCCCHHH
Confidence            9999877667899996 57899999999999999753211  1112233344556799999977999 887 7754

>PLN02240 UDP-glucose 4-epimerase

Probab=100.00  E-value=6.7e-40  Score=285.64  Aligned_cols=291  Identities=20%  Similarity=0.210  Sum_probs=216.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccc-hhhhhhcc-CccCceEEEEccCCCcchHHHHhc--CCCEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSK-VGFLWELN-GAEERLKIMKADLLMEGSFDEAIQ--GVDGV   77 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~--~~d~V   77 (305)
                      ++|+|||||||||++|++.|+++|++|++++|....... ...+.... ....+++++.+|+.|++.+.++++  ++|+|
T Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~d~v   85 (352)
T PLN02240          6 RTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRFDAV   85 (352)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCCCEE
Confidence            689999999999999999999999999999876432211 11111111 112368899999999999999886  68999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccch
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNL  157 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  157 (305)
                      ||+|+..........+...+++|+.++.+++++|++. ++++||++||+.+|+...    ..+++|+++..+.      +
T Consensus        86 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~vyg~~~----~~~~~E~~~~~~~------~  154 (352)
T PLN02240         86 IHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKH-GCKKLVFSSSATVYGQPE----EVPCTEEFPLSAT------N  154 (352)
T ss_pred             EEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEccHHHhCCCC----CCCCCCCCCCCCC------C
Confidence            9999976543344556678999999999999999988 889999999998876432    2578999887776      7


Q ss_pred             hHHHHHHHHHHHHHHHHHH-cCCcEEEEecCceecCCCCC------C--CCchHHHHHHHHhcCC--C-CC--------C
Q 039049          158 WYAYAKTIAEKEAWRIAKD-CGIDMVVVNPSFVVGPLLAP------Q--PTSTLLLILAMVKGLR--G-EY--------P  217 (305)
Q Consensus       158 ~Y~~sK~~~E~~~~~~~~~-~~~~~~i~Rp~~v~G~~~~~------~--~~~~~~~~~~~~~~~~--~-~~--------~  217 (305)
                      .|+.+|.++|.+++.+... .+++++++|++++||++...      .  ......++..+..+..  + .+        +
T Consensus       155 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g  234 (352)
T PLN02240        155 PYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDG  234 (352)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCC
Confidence            8999999999999988654 58999999999999975321      1  1112234444444432  1 11        2


Q ss_pred             CCCccceeHHHHHHHHHHhhccc----cc-CceEEEe-cCCcCHHHHHHHHHHhCCCCCCCCC-CCCCCCCCCCcccchh
Q 039049          218 NTTVGFVHIDDVVGAHILAMEET----RA-SGRLICS-SSVAHWSPIIEMLKATYPSYPYESK-CSKQEGDNSPHSMDTS  290 (305)
Q Consensus       218 ~~~~~~i~v~D~a~~~~~~~~~~----~~-~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  290 (305)
                      .+.++|+|++|+|++++.++++.    .. ++.||++ ++.+|++|+++.+.+.+|.. .+.. .............|++
T Consensus       235 ~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~d~~  313 (352)
T PLN02240        235 TGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKK-IPLKLAPRRPGDAEEVYASTE  313 (352)
T ss_pred             CEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCC-CCceeCCCCCCChhhhhcCHH
Confidence            33799999999999999888642    22 3689995 78999999999999999742 2221 1223334445668999


Q ss_pred             HHHH-hCCCccc-cCCC
Q 039049          291 KLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       291 ~~~~-lg~~~~~-~l~e  305 (305)
                      |+++ ||| +|+ +|+|
T Consensus       314 k~~~~lg~-~p~~~l~~  329 (352)
T PLN02240        314 KAEKELGW-KAKYGIDE  329 (352)
T ss_pred             HHHHHhCC-CCCCCHHH
Confidence            9999 999 998 7754

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=100.00  E-value=1.9e-39  Score=281.18  Aligned_cols=289  Identities=20%  Similarity=0.227  Sum_probs=212.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccch-hhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKV-GFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi   78 (305)
                      |+|+||||+||||++|++.|+++|++|++++|........ ..+....  ..++.++.+|+.|.+.+.++++  ++|+||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vv   78 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLG--GKHPTFVEGDIRNEALLTEILHDHAIDTVI   78 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhc--CCCceEEEccCCCHHHHHHHHhcCCCCEEE
Confidence            5799999999999999999999999999998753322111 1111111  2256788999999999998886  689999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCC-Ccccccccch
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS-DPDYCKHYNL  157 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~-~~~~~~~~~~  157 (305)
                      |+|+..............+++|+.++.+++++|++. ++++||++||.++|+...    ..+++|+++. .|.      +
T Consensus        79 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~yg~~~----~~~~~E~~~~~~p~------~  147 (338)
T PRK10675         79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNLIFSSSATVYGDQP----KIPYVESFPTGTPQ------S  147 (338)
T ss_pred             ECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHhhCCCC----CCccccccCCCCCC------C
Confidence            999876543233445668999999999999999998 899999999998876432    2577888775 444      7


Q ss_pred             hHHHHHHHHHHHHHHHHHHc-CCcEEEEecCceecCCCCCC--------CCchHHHHHHHHhcCC--C-------C--CC
Q 039049          158 WYAYAKTIAEKEAWRIAKDC-GIDMVVVNPSFVVGPLLAPQ--------PTSTLLLILAMVKGLR--G-------E--YP  217 (305)
Q Consensus       158 ~Y~~sK~~~E~~~~~~~~~~-~~~~~i~Rp~~v~G~~~~~~--------~~~~~~~~~~~~~~~~--~-------~--~~  217 (305)
                      .|+.+|.++|++++.+++.. +++++++|++++||+.....        .......+..+..+..  +       .  -+
T Consensus       148 ~Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  227 (338)
T PRK10675        148 PYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDG  227 (338)
T ss_pred             hhHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCC
Confidence            79999999999999987664 89999999999999752211        0112233444443322  1       1  12


Q ss_pred             CCCccceeHHHHHHHHHHhhccc--cc-CceEEEe-cCCcCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCcccchhHHH
Q 039049          218 NTTVGFVHIDDVVGAHILAMEET--RA-SGRLICS-SSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLF  293 (305)
Q Consensus       218 ~~~~~~i~v~D~a~~~~~~~~~~--~~-~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (305)
                      .+.++|+|++|+|++++.+++..  .. ++.||++ ++.+|+.|+++.+.+.+|..................++|++|++
T Consensus       228 ~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~  307 (338)
T PRK10675        228 TGVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYWADASKAD  307 (338)
T ss_pred             cEEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCCCCeeeCCCCCCchhhhhcCHHHHH
Confidence            33799999999999999998752  22 3579996 67899999999999999753111112223344566788999999


Q ss_pred             H-hCCCccc-cCC
Q 039049          294 E-LGFVGFK-SVP  304 (305)
Q Consensus       294 ~-lg~~~~~-~l~  304 (305)
                      + +|| +|+ +++
T Consensus       308 ~~lg~-~p~~~~~  319 (338)
T PRK10675        308 RELNW-RVTRTLD  319 (338)
T ss_pred             HHhCC-CCcCcHH
Confidence            9 999 887 765

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=100.00  E-value=3e-39  Score=277.27  Aligned_cols=282  Identities=29%  Similarity=0.331  Sum_probs=223.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCC-CEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGV-DGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-d~Vi~~   80 (305)
                      |+||||||+||||++|++.|++.|++|++++|.........         .++.++.+|+.|.+.+.++.+.+ |+|||+
T Consensus         1 ~~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~d~~~~~~~~~~~~~~~d~vih~   71 (314)
T COG0451           1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL---------SGVEFVVLDLTDRDLVDELAKGVPDAVIHL   71 (314)
T ss_pred             CeEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc---------cccceeeecccchHHHHHHHhcCCCEEEEc
Confidence            45999999999999999999999999999999876443221         26789999999988888888877 999999


Q ss_pred             ccccccCCCCc-hhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCC-CCCCcccccccchh
Q 039049           81 ASPVLVPYDNN-IQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNES-HWSDPDYCKHYNLW  158 (305)
Q Consensus        81 a~~~~~~~~~~-~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~-~~~~~~~~~~~~~~  158 (305)
                      |+......... ++..++..|+.++.+++++|++. ++++|||.||.++++....   ..+++|+ .+..|.      ++
T Consensus        72 aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~-~~~~~v~~ss~~~~~~~~~---~~~~~E~~~~~~p~------~~  141 (314)
T COG0451          72 AAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAA-GVKRFVFASSVSVVYGDPP---PLPIDEDLGPPRPL------NP  141 (314)
T ss_pred             cccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeCCCceECCCCC---CCCcccccCCCCCC------CH
Confidence            99987653322 34568999999999999999997 9999999888887776522   2478888 566665      67


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC--chHHHHHHHHhcCC-CCC-CCC--CccceeHHHHHHH
Q 039049          159 YAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPT--STLLLILAMVKGLR-GEY-PNT--TVGFVHIDDVVGA  232 (305)
Q Consensus       159 Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~--~~~~~~~~~~~~~~-~~~-~~~--~~~~i~v~D~a~~  232 (305)
                      |+.+|+++|..++.+...++++++++||+++|||+......  ....++.....+.+ ... +++  .++++|++|++++
T Consensus       142 Yg~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  221 (314)
T COG0451         142 YGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADA  221 (314)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHH
Confidence            99999999999999988889999999999999998766422  22334555666665 333 333  6799999999999


Q ss_pred             HHHhhcccccCceEEEe-cC-CcCHHHHHHHHHHhCCCCCC-CCCCC--CCCCCCCCcccchhHHHH-hCCCccc-cCC
Q 039049          233 HILAMEETRASGRLICS-SS-VAHWSPIIEMLKATYPSYPY-ESKCS--KQEGDNSPHSMDTSKLFE-LGFVGFK-SVP  304 (305)
Q Consensus       233 ~~~~~~~~~~~~~~~~~-~~-~~s~~el~~~i~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~-lg~~~~~-~l~  304 (305)
                      ++.+++++... .||++ +. .++++|+++.+.+..|.... .....  ..........+|++|++. ||| .|+ +++
T Consensus       222 ~~~~~~~~~~~-~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~-~p~~~~~  298 (314)
T COG0451         222 LLLALENPDGG-VFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPLGRRGDLREGKLLDISKARAALGW-EPKVSLE  298 (314)
T ss_pred             HHHHHhCCCCc-EEEeCCCCCcEEHHHHHHHHHHHhCCCCcceeecCCCCCCcccccccCCHHHHHHHhCC-CCCCCHH
Confidence            99999998777 99996 44 79999999999999975422 11111  244555678899999999 999 987 664

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=100.00  E-value=4.3e-39  Score=277.96  Aligned_cols=285  Identities=28%  Similarity=0.382  Sum_probs=217.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      |+|+||||+||||+++++.|+++|++|++++|++.......        ..+++++++|+.|.+++.++++++|+|||+|
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a   72 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLE--------GLDVEIVEGDLRDPASLRKAVAGCRALFHVA   72 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccc--------cCCceEEEeeCCCHHHHHHHHhCCCEEEEec
Confidence            57999999999999999999999999999999865432111        1257899999999999999999999999999


Q ss_pred             cccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHHH
Q 039049           82 SPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAY  161 (305)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~  161 (305)
                      +....  +...+...++.|+.++.++++++++. ++++||++||..+|+....   ..+.+|+.+..+...   .+.|+.
T Consensus        73 ~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~~~~~~---~~~~~e~~~~~~~~~---~~~Y~~  143 (328)
T TIGR03466        73 ADYRL--WAPDPEEMYAANVEGTRNLLRAALEA-GVERVVYTSSVATLGVRGD---GTPADETTPSSLDDM---IGHYKR  143 (328)
T ss_pred             eeccc--CCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEechhhcCcCCC---CCCcCccCCCCcccc---cChHHH
Confidence            86532  23455678999999999999999988 8999999999998875322   257788877655311   156999


Q ss_pred             HHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhcccc
Q 039049          162 AKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETR  241 (305)
Q Consensus       162 sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  241 (305)
                      +|.++|++++.+..+++++++++||+++||++..... ....++.....+......+...+|+|++|+|++++.+++++.
T Consensus       144 sK~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~  222 (328)
T TIGR03466       144 SKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKPT-PTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHLLALERGR  222 (328)
T ss_pred             HHHHHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCCC-cHHHHHHHHHcCCCceeeCCCcceEEHHHHHHHHHHHHhCCC
Confidence            9999999999998888999999999999999754321 122233444444333334446799999999999999998866


Q ss_pred             cCceEEEecCCcCHHHHHHHHHHhCCCCC----CCCCC---------------CCCCC--------CCCCcccchhHHHH
Q 039049          242 ASGRLICSSSVAHWSPIIEMLKATYPSYP----YESKC---------------SKQEG--------DNSPHSMDTSKLFE  294 (305)
Q Consensus       242 ~~~~~~~~~~~~s~~el~~~i~~~~~~~~----~~~~~---------------~~~~~--------~~~~~~~~~~~~~~  294 (305)
                      .+..|+++++.+|++|+++.+.+.+|...    +|...               ...+.        ......+|++|+++
T Consensus       223 ~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~  302 (328)
T TIGR03466       223 IGERYILGGENLTLKQILDKLAEITGRPAPRVKLPRWLLLPVAWGAEALARLTGKEPRVTVDGVRMAKKKMFFSSAKAVR  302 (328)
T ss_pred             CCceEEecCCCcCHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHhccCCCChHHHHH
Confidence            56678888889999999999999987521    11100               00000        01356789999999


Q ss_pred             -hCCCccccCCC
Q 039049          295 -LGFVGFKSVPQ  305 (305)
Q Consensus       295 -lg~~~~~~l~e  305 (305)
                       ||| +|++|+|
T Consensus       303 ~lg~-~p~~~~~  313 (328)
T TIGR03466       303 ELGY-RQRPARE  313 (328)
T ss_pred             HcCC-CCcCHHH
Confidence             999 9887753

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=100.00  E-value=6.8e-40  Score=280.34  Aligned_cols=274  Identities=19%  Similarity=0.267  Sum_probs=197.9

Q ss_pred             EEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCc---ch-HHHHhc-----CC
Q 039049            4 YCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME---GS-FDEAIQ-----GV   74 (305)
Q Consensus         4 ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~---~~-~~~~~~-----~~   74 (305)
                      ||||||+||||+||+++|+++|++++++.|+.......            .....+|+.|.   +. +.+++.     ++
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   69 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF------------VNLVDLDIADYMDKEDFLAQIMAGDDFGDI   69 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH------------HhhhhhhhhhhhhHHHHHHHHhcccccCCc
Confidence            89999999999999999999999888887765422110            01223455443   33 333332     68


Q ss_pred             CEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccc
Q 039049           75 DGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKH  154 (305)
Q Consensus        75 d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  154 (305)
                      |+|||+|+..... ..+ ....++.|+.++.+|+++|++. ++ +|||+||.++|+....    .+.+|+++..|.    
T Consensus        70 d~Vih~A~~~~~~-~~~-~~~~~~~n~~~t~~ll~~~~~~-~~-~~i~~SS~~vyg~~~~----~~~~E~~~~~p~----  137 (308)
T PRK11150         70 EAIFHEGACSSTT-EWD-GKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAATYGGRTD----DFIEEREYEKPL----  137 (308)
T ss_pred             cEEEECceecCCc-CCC-hHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEcchHHhCcCCC----CCCccCCCCCCC----
Confidence            9999999965543 222 3447899999999999999998 76 6999999998876421    356777776666    


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC---chHHHHHHHHhcCCCC-C-CCC--CccceeHH
Q 039049          155 YNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPT---STLLLILAMVKGLRGE-Y-PNT--TVGFVHID  227 (305)
Q Consensus       155 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~---~~~~~~~~~~~~~~~~-~-~~~--~~~~i~v~  227 (305)
                        +.|+.+|.++|++++.+..+.+++++++||+++|||+......   ....++..+.++.... . +++  .++|+|++
T Consensus       138 --~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~  215 (308)
T PRK11150        138 --NVYGYSKFLFDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVG  215 (308)
T ss_pred             --CHHHHHHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHH
Confidence              7899999999999999988889999999999999998644221   1122335566665432 2 333  79999999


Q ss_pred             HHHHHHHHhhcccccCceEEEe-cCCcCHHHHHHHHHHhCCCCCCCCCCCCC---CCCCCCcccchhHHHHhCCCccc--
Q 039049          228 DVVGAHILAMEETRASGRLICS-SSVAHWSPIIEMLKATYPSYPYESKCSKQ---EGDNSPHSMDTSKLFELGFVGFK--  301 (305)
Q Consensus       228 D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~lg~~~~~--  301 (305)
                      |+|++++.+++.. .++.||++ +..+|+.|+++.+.+.++..++.......   ........+|++|++++|| +|+  
T Consensus       216 D~a~a~~~~~~~~-~~~~yni~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~g~-~p~~~  293 (308)
T PRK11150        216 DVAAVNLWFWENG-VSGIFNCGTGRAESFQAVADAVLAYHKKGEIEYIPFPDKLKGRYQAFTQADLTKLRAAGY-DKPFK  293 (308)
T ss_pred             HHHHHHHHHHhcC-CCCeEEcCCCCceeHHHHHHHHHHHhCCCcceeccCccccccccceecccCHHHHHhcCC-CCCCC
Confidence            9999999998864 35689995 66899999999999998742222111111   1112345789999988999 764  


Q ss_pred             cCCC
Q 039049          302 SVPQ  305 (305)
Q Consensus       302 ~l~e  305 (305)
                      +|+|
T Consensus       294 ~~~~  297 (308)
T PRK11150        294 TVAE  297 (308)
T ss_pred             CHHH
Confidence            6653

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=1.8e-39  Score=278.99  Aligned_cols=289  Identities=19%  Similarity=0.216  Sum_probs=219.5

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcC--CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcC--CCEEE
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKG--HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQG--VDGVF   78 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~Vi   78 (305)
                      +|+|||||||||++++++|++.|  ++|+++.|...... ...+.... ...+++++.+|+.|++++.+++++  +|+||
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi   78 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGN-LENLADLE-DNPRYRFVKGDIGDRELVSRLFTEHQPDAVV   78 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchh-hhhhhhhc-cCCCcEEEEcCCcCHHHHHHHHhhcCCCEEE
Confidence            69999999999999999999987  78998876432111 11111111 123678899999999999999986  89999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCcc-EEEEeccceeeeccCCCCCCcccCCCCCCCcccccccch
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVK-RVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNL  157 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  157 (305)
                      |+|+........+.+..++++|+.++.+++++|.+. +.+ ++||+||..+|+.....   .+++|+++..|.      +
T Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~i~~Ss~~v~g~~~~~---~~~~e~~~~~~~------~  148 (317)
T TIGR01181        79 HFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKY-WHEFRFHHISTDEVYGDLEKG---DAFTETTPLAPS------S  148 (317)
T ss_pred             EcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhc-CCCceEEEeeccceeCCCCCC---CCcCCCCCCCCC------C
Confidence            999986644344556678999999999999999886 433 89999999988764321   367888777665      7


Q ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCC-CCC--CCccceeHHHHHHHHH
Q 039049          158 WYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGE-YPN--TTVGFVHIDDVVGAHI  234 (305)
Q Consensus       158 ~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~i~v~D~a~~~~  234 (305)
                      .|+.+|..+|.+++.++.+.+++++++||+.+||+..... .....++..+..+.++. +++  ..++|+|++|+++++.
T Consensus       149 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~  227 (317)
T TIGR01181       149 PYSASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPE-KLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIY  227 (317)
T ss_pred             chHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcc-cHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHH
Confidence            7999999999999998888899999999999999975432 23345566666666543 333  3789999999999999


Q ss_pred             HhhcccccCceEEEe-cCCcCHHHHHHHHHHhCCCCCCC-CCCCCCCCCCCCcccchhHHHH-hCCCccc-cCCC
Q 039049          235 LAMEETRASGRLICS-SSVAHWSPIIEMLKATYPSYPYE-SKCSKQEGDNSPHSMDTSKLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       235 ~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-lg~~~~~-~l~e  305 (305)
                      .++++...++.||++ ++.+|+.|+++.+.+.+|..+.. ............+.+|++|+++ ||| +|+ +|+|
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~-~p~~~~~~  301 (317)
T TIGR01181       228 LVLEKGRVGETYNIGGGNERTNLEVVETILELLGKDEDLITHVEDRPGHDRRYAIDASKIKRELGW-APKYTFEE  301 (317)
T ss_pred             HHHcCCCCCceEEeCCCCceeHHHHHHHHHHHhCCCcccccccCCCccchhhhcCCHHHHHHHhCC-CCCCcHHH
Confidence            999877667789995 56899999999999999753211 1111122233345689999999 999 887 7753

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=100.00  E-value=1.2e-39  Score=278.75  Aligned_cols=272  Identities=19%  Similarity=0.191  Sum_probs=201.6

Q ss_pred             EEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEEEecc
Q 039049            5 CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVFHTAS   82 (305)
Q Consensus         5 lItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi~~a~   82 (305)
                      |||||+||||++|++.|++.|++|+++.+.                      ..+|+.|.+.+.++++  ++|+|||||+
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~----------------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~   58 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH----------------------KELDLTRQADVEAFFAKEKPTYVILAAA   58 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc----------------------ccCCCCCHHHHHHHHhccCCCEEEEeee
Confidence            699999999999999999999988766322                      1479999999999887  5799999999


Q ss_pred             ccccC-CCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHHH
Q 039049           83 PVLVP-YDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAY  161 (305)
Q Consensus        83 ~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~  161 (305)
                      ..... .....+..+++.|+.++.+++++|++. ++++|||+||+.+|+...    ..+++|+++..... .....+|+.
T Consensus        59 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~SS~~vyg~~~----~~~~~E~~~~~~~~-~p~~~~Y~~  132 (306)
T PLN02725         59 KVGGIHANMTYPADFIRENLQIQTNVIDAAYRH-GVKKLLFLGSSCIYPKFA----PQPIPETALLTGPP-EPTNEWYAI  132 (306)
T ss_pred             eecccchhhhCcHHHHHHHhHHHHHHHHHHHHc-CCCeEEEeCceeecCCCC----CCCCCHHHhccCCC-CCCcchHHH
Confidence            86532 123345568899999999999999998 899999999999887532    25788877432110 000135999


Q ss_pred             HHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCC---CCchHHHHH----HHHhcCCCC--CC--CCCccceeHHHHH
Q 039049          162 AKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQ---PTSTLLLIL----AMVKGLRGE--YP--NTTVGFVHIDDVV  230 (305)
Q Consensus       162 sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~---~~~~~~~~~----~~~~~~~~~--~~--~~~~~~i~v~D~a  230 (305)
                      +|.++|++++.+.+.++++++++||+++|||+....   ......++.    ....+.+..  ++  ...++|+|++|++
T Consensus       133 sK~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~  212 (306)
T PLN02725        133 AKIAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLA  212 (306)
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHH
Confidence            999999999999888899999999999999975321   112222332    223344433  33  3378999999999


Q ss_pred             HHHHHhhcccccCceEEEe-cCCcCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCcccchhHHHHhCCCccc-cCCC
Q 039049          231 GAHILAMEETRASGRLICS-SSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELGFVGFK-SVPQ  305 (305)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~-~l~e  305 (305)
                      ++++.+++.....+.||++ ++.+|+.|+++.+.+.++..........+........+|++|++++|| +|+ +|+|
T Consensus       213 ~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~-~p~~~~~~  288 (306)
T PLN02725        213 DAVVFLMRRYSGAEHVNVGSGDEVTIKELAELVKEVVGFEGELVWDTSKPDGTPRKLMDSSKLRSLGW-DPKFSLKD  288 (306)
T ss_pred             HHHHHHHhccccCcceEeCCCCcccHHHHHHHHHHHhCCCCceeecCCCCCcccccccCHHHHHHhCC-CCCCCHHH
Confidence            9999999876555678996 679999999999999986421111112223334456789999977999 998 7753

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=100.00  E-value=3.1e-39  Score=270.07  Aligned_cols=250  Identities=26%  Similarity=0.292  Sum_probs=188.6

Q ss_pred             EEeCCcchHHHHHHHHHHHcC--CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEecc
Q 039049            5 CVTGGTGFIAAHLVKALLDKG--HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTAS   82 (305)
Q Consensus         5 lItG~~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a~   82 (305)
                      |||||+||||+||+++|+++|  ++|+++++++...... .+..    .+..+++++|++|++++.++++++|+|||+|+
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~-~~~~----~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa   75 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLK-DLQK----SGVKEYIQGDITDPESLEEALEGVDVVFHTAA   75 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccch-hhhc----ccceeEEEeccccHHHHHHHhcCCceEEEeCc
Confidence            699999999999999999999  7999998876532211 1111    12334999999999999999999999999999


Q ss_pred             ccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHHHH
Q 039049           83 PVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYA  162 (305)
Q Consensus        83 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~s  162 (305)
                      ...... ....+.++++|+.||+|++++|++. +++||||+||.+++++......-...+|+.+..+.    +.+.|+.|
T Consensus        76 ~~~~~~-~~~~~~~~~vNV~GT~nvl~aa~~~-~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~----~~~~Y~~S  149 (280)
T PF01073_consen   76 PVPPWG-DYPPEEYYKVNVDGTRNVLEAARKA-GVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSS----PLDPYAES  149 (280)
T ss_pred             cccccC-cccHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcCcceeEeccCCCCcccCCcCCccccc----ccCchHHH
Confidence            877542 4566779999999999999999999 99999999999999873222111223455443222    22779999


Q ss_pred             HHHHHHHHHHHHH---H--cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcC-CCCCCC--CCccceeHHHHHHHHH
Q 039049          163 KTIAEKEAWRIAK---D--CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGL-RGEYPN--TTVGFVHIDDVVGAHI  234 (305)
Q Consensus       163 K~~~E~~~~~~~~---~--~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~i~v~D~a~~~~  234 (305)
                      |.++|++++.+..   +  ..+.++++||+.||||+........   ......+. ....++  ...+++|++|+|.+++
T Consensus       150 K~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~---~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahv  226 (280)
T PF01073_consen  150 KALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRL---VKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHV  226 (280)
T ss_pred             HHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchh---hHHHHhcccceeecCCCceECcEeHHHHHHHHH
Confidence            9999999998765   2  2499999999999999865433332   23333342 233333  3799999999999999


Q ss_pred             Hhhcc---c-----ccCceEEEe-cCCcC-HHHHHHHHHHhCCC
Q 039049          235 LAMEE---T-----RASGRLICS-SSVAH-WSPIIEMLKATYPS  268 (305)
Q Consensus       235 ~~~~~---~-----~~~~~~~~~-~~~~s-~~el~~~i~~~~~~  268 (305)
                      .+++.   +     ..++.|+++ ++++. ++||+..+.+.+|.
T Consensus       227 lA~~~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~  270 (280)
T PF01073_consen  227 LAAQALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGY  270 (280)
T ss_pred             HHHHHhccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCC
Confidence            88653   2     235579997 56787 99999999999974

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=100.00  E-value=2.2e-38  Score=268.52  Aligned_cols=261  Identities=16%  Similarity=0.148  Sum_probs=204.8

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcC--CCEEEEe
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQG--VDGVFHT   80 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~Vi~~   80 (305)
                      +||||||+||||++++++|++.|++|++++|+                       .+|+.+.+.+.+++++  +|+|||+
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-----------------------~~d~~~~~~~~~~~~~~~~d~vi~~   57 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS-----------------------QLDLTDPEALERLLRAIRPDAVVNT   57 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-----------------------ccCCCCHHHHHHHHHhCCCCEEEEC
Confidence            69999999999999999999999999999874                       3688899999999985  4999999


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHH
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYA  160 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  160 (305)
                      |+..........+...+++|+.++.+++++|++. +. +||++||.++|++..    ..+++|++++.|.      +.|+
T Consensus        58 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~v~~Ss~~vy~~~~----~~~~~E~~~~~~~------~~Y~  125 (287)
T TIGR01214        58 AAYTDVDGAESDPEKAFAVNALAPQNLARAAARH-GA-RLVHISTDYVFDGEG----KRPYREDDATNPL------NVYG  125 (287)
T ss_pred             CccccccccccCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEeeeeeecCCC----CCCCCCCCCCCCc------chhh
Confidence            9976543333445668899999999999999887 64 899999999886532    2578898887765      7899


Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCC-CCCCCccceeHHHHHHHHHHhhcc
Q 039049          161 YAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGE-YPNTTVGFVHIDDVVGAHILAMEE  239 (305)
Q Consensus       161 ~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~~~~~~  239 (305)
                      .+|..+|..++.+    +.+++++||+.+||++...  .....++..+..+.+.. .++..++++|++|+|+++..++++
T Consensus       126 ~~K~~~E~~~~~~----~~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~  199 (287)
T TIGR01214       126 QSKLAGEQAIRAA----GPNALIVRTSWLYGGGGGR--NFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQR  199 (287)
T ss_pred             HHHHHHHHHHHHh----CCCeEEEEeeecccCCCCC--CHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHhh
Confidence            9999999998654    6899999999999997432  22333455555554443 355678999999999999999988


Q ss_pred             c-ccCceEEEe-cCCcCHHHHHHHHHHhCCCCCCCCC-----------CCCCCCCCCCcccchhHHHH-hCCCccccCCC
Q 039049          240 T-RASGRLICS-SSVAHWSPIIEMLKATYPSYPYESK-----------CSKQEGDNSPHSMDTSKLFE-LGFVGFKSVPQ  305 (305)
Q Consensus       240 ~-~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~-lg~~~~~~l~e  305 (305)
                      + ..++.||++ ++.+|+.|+++.+.+.+|.......           ............+|++|+++ ||| ++++|+|
T Consensus       200 ~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~-~~~~~~~  278 (287)
T TIGR01214       200 LARARGVYHLANSGQCSWYEFAQAIFEEAGADGLLLHPQEVKPISSKEYPRPARRPAYSVLDNTKLVKTLGT-PLPHWRE  278 (287)
T ss_pred             ccCCCCeEEEECCCCcCHHHHHHHHHHHhCcccccccCceeEeecHHHcCCCCCCCCccccchHHHHHHcCC-CCccHHH
Confidence            6 457889996 5789999999999999975432100           01112223457899999999 999 8777653

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=8.2e-39  Score=258.89  Aligned_cols=291  Identities=22%  Similarity=0.250  Sum_probs=233.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCC-CcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDP-EDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi   78 (305)
                      ++||||||+||||+|.+-+|+++|+.|.+++.=. ....+............++.+.++|+.|.+.++++|+  ++|.|+
T Consensus         3 ~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V~   82 (343)
T KOG1371|consen    3 KHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAVM   82 (343)
T ss_pred             cEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceEE
Confidence            6899999999999999999999999999996422 2233444444455545689999999999999999997  689999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCC-cccccccch
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSD-PDYCKHYNL  157 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~-~~~~~~~~~  157 (305)
                      |+|+......+...+..+..+|+.++.+|++.++++ +++.+||.||+.+|+....    -|++|+++.. |.      +
T Consensus        83 Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~-~~~~~V~sssatvYG~p~~----ip~te~~~t~~p~------~  151 (343)
T KOG1371|consen   83 HFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAH-NVKALVFSSSATVYGLPTK----VPITEEDPTDQPT------N  151 (343)
T ss_pred             eehhhhccchhhhCchhheehhhhhHHHHHHHHHHc-CCceEEEecceeeecCcce----eeccCcCCCCCCC------C
Confidence            999999988888888999999999999999999999 7999999999999887543    7999999988 66      8


Q ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEEecCceec--CCCCCCCC------chHHHHHHHHhcCCC---------C--CCC
Q 039049          158 WYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVG--PLLAPQPT------STLLLILAMVKGLRG---------E--YPN  218 (305)
Q Consensus       158 ~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G--~~~~~~~~------~~~~~~~~~~~~~~~---------~--~~~  218 (305)
                      +|+.+|.+.|+...++...+++.++.||.++++|  |.......      .+...+.+...+...         .  .++
T Consensus       152 pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dgt  231 (343)
T KOG1371|consen  152 PYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDGT  231 (343)
T ss_pred             cchhhhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccccCCC
Confidence            8999999999999999988899999999999999  43221110      111122222222221         1  234


Q ss_pred             CCccceeHHHHHHHHHHhhccccc---CceEEEe-cCCcCHHHHHHHHHHhCCCC-CCCCCCCCCCCCCCCcccchhHHH
Q 039049          219 TTVGFVHIDDVVGAHILAMEETRA---SGRLICS-SSVAHWSPIIEMLKATYPSY-PYESKCSKQEGDNSPHSMDTSKLF  293 (305)
Q Consensus       219 ~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~-~~~~s~~el~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  293 (305)
                      ..|++||+-|.|+....++.....   .++||++ +...++.+|++++.++.|.. +++ ..+.+.++......+.+++.
T Consensus       232 ~vrdyi~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~~-~v~~R~gdv~~~ya~~~~a~  310 (343)
T KOG1371|consen  232 IVRDYIHVLDLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKKK-VVPRRNGDVAFVYANPSKAQ  310 (343)
T ss_pred             eeecceeeEehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCcc-ccCCCCCCceeeeeChHHHH
Confidence            489999999999999999987654   3479984 77899999999999999764 333 33448888888999999999


Q ss_pred             H-hCCCccc-cCCC
Q 039049          294 E-LGFVGFK-SVPQ  305 (305)
Q Consensus       294 ~-lg~~~~~-~l~e  305 (305)
                      + ||| +++ +++|
T Consensus       311 ~elgw-k~~~~iee  323 (343)
T KOG1371|consen  311 RELGW-KAKYGLQE  323 (343)
T ss_pred             HHhCC-ccccCHHH
Confidence            9 999 888 6653

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=100.00  E-value=4.5e-38  Score=270.07  Aligned_cols=266  Identities=19%  Similarity=0.192  Sum_probs=201.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC--CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG--HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~   79 (305)
                      |+||||||+||||+++++.|+++|  ++|++++|+..+...   +..... ..+++++.+|+.|.+.+.++++++|+|||
T Consensus         5 k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~---~~~~~~-~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih   80 (324)
T TIGR03589         5 KSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWE---MQQKFP-APCLRFFIGDVRDKERLTRALRGVDYVVH   80 (324)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHH---HHHHhC-CCcEEEEEccCCCHHHHHHHHhcCCEEEE
Confidence            689999999999999999999986  789999887543211   111111 13688999999999999999999999999


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhH
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWY  159 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y  159 (305)
                      +||..........+...+++|+.++.+++++|.+. ++++||++||....                  .|.      ++|
T Consensus        81 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~-~~~~iV~~SS~~~~------------------~p~------~~Y  135 (324)
T TIGR03589        81 AAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDN-GVKRVVALSTDKAA------------------NPI------NLY  135 (324)
T ss_pred             CcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEeCCCCC------------------CCC------CHH
Confidence            99976543334445678999999999999999998 88999999995421                  112      669


Q ss_pred             HHHHHHHHHHHHHHHH---HcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcC-CCCC--CCCCccceeHHHHHHHH
Q 039049          160 AYAKTIAEKEAWRIAK---DCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGL-RGEY--PNTTVGFVHIDDVVGAH  233 (305)
Q Consensus       160 ~~sK~~~E~~~~~~~~---~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~i~v~D~a~~~  233 (305)
                      +.+|.++|.+++.++.   .++++++++||+++|||+.    .....+......+. +..+  +...|+|+|++|+|+++
T Consensus       136 ~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~----~~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~  211 (324)
T TIGR03589       136 GATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRG----SVVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFV  211 (324)
T ss_pred             HHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCC----CcHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHH
Confidence            9999999999877543   4689999999999999863    23334444554554 2333  33479999999999999


Q ss_pred             HHhhcccccCceEEEecCCcCHHHHHHHHHHhCCCCCCCCCCCCCCCCC-CCcccchhHHHH-hCCCccc-cCCC
Q 039049          234 ILAMEETRASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDN-SPHSMDTSKLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-lg~~~~~-~l~e  305 (305)
                      +.++++...+..|+.++..+++.|+++.+.+..+....+    .+.++. ....+|++|+++ ||| +|+ +|+|
T Consensus       212 ~~al~~~~~~~~~~~~~~~~sv~el~~~i~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~lg~-~~~~~l~~  281 (324)
T TIGR03589       212 LKSLERMLGGEIFVPKIPSMKITDLAEAMAPECPHKIVG----IRPGEKLHEVMITEDDARHTYEL-GDYYAILP  281 (324)
T ss_pred             HHHHhhCCCCCEEccCCCcEEHHHHHHHHHhhCCeeEeC----CCCCchhHhhhcChhhhhhhcCC-CCeEEEcc
Confidence            999987544556765677899999999999876322111    123332 336689999999 999 998 8764

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=100.00  E-value=9.2e-37  Score=261.87  Aligned_cols=276  Identities=17%  Similarity=0.168  Sum_probs=201.8

Q ss_pred             EEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc----CCCEEE
Q 039049            4 YCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ----GVDGVF   78 (305)
Q Consensus         4 ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----~~d~Vi   78 (305)
                      ||||||+||||+++++.|++.|+ +|+++.|..... ....+        ....+..|+.+.+.++.+.+    ++|+||
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~~~--------~~~~~~~d~~~~~~~~~~~~~~~~~~D~vv   71 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFLNL--------ADLVIADYIDKEDFLDRLEKGAFGKIEAIF   71 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhhhh--------hheeeeccCcchhHHHHHHhhccCCCCEEE
Confidence            69999999999999999999997 788887654321 11111        11346678888777777654    799999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCC-Ccccccccch
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS-DPDYCKHYNL  157 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~-~~~~~~~~~~  157 (305)
                      |+|+.....  ..++...+++|+.++.+++++|++. ++ +|||+||.++|+...     .+++|++++ .|.      +
T Consensus        72 h~A~~~~~~--~~~~~~~~~~n~~~~~~ll~~~~~~-~~-~~v~~SS~~vy~~~~-----~~~~e~~~~~~p~------~  136 (314)
T TIGR02197        72 HQGACSDTT--ETDGEYMMENNYQYSKRLLDWCAEK-GI-PFIYASSAATYGDGE-----AGFREGRELERPL------N  136 (314)
T ss_pred             ECccccCcc--ccchHHHHHHHHHHHHHHHHHHHHh-CC-cEEEEccHHhcCCCC-----CCcccccCcCCCC------C
Confidence            999975432  3345668899999999999999988 76 799999999887532     355666543 243      7


Q ss_pred             hHHHHHHHHHHHHHHHHH--HcCCcEEEEecCceecCCCCCCC---CchHHHHHHHHhcCCCCC---------CCCCccc
Q 039049          158 WYAYAKTIAEKEAWRIAK--DCGIDMVVVNPSFVVGPLLAPQP---TSTLLLILAMVKGLRGEY---------PNTTVGF  223 (305)
Q Consensus       158 ~Y~~sK~~~E~~~~~~~~--~~~~~~~i~Rp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~---------~~~~~~~  223 (305)
                      .|+.+|..+|.+++.+..  ..+++++++||+++||++.....   .....++..+..+.++.+         ++..++|
T Consensus       137 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  216 (314)
T TIGR02197       137 VYGYSKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDF  216 (314)
T ss_pred             HHHHHHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeee
Confidence            799999999999987543  24689999999999999854321   223345556665554321         2336899


Q ss_pred             eeHHHHHHHHHHhhcccccCceEEEe-cCCcCHHHHHHHHHHhCCCCC-CCCCCC-CC--CCCCCCcccchhHHHH-hCC
Q 039049          224 VHIDDVVGAHILAMEETRASGRLICS-SSVAHWSPIIEMLKATYPSYP-YESKCS-KQ--EGDNSPHSMDTSKLFE-LGF  297 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~-~~~~~~-~~--~~~~~~~~~~~~~~~~-lg~  297 (305)
                      +|++|+++++..++.+ ..++.||++ ++++|++|+++.+.+.+|... +..... ..  ........+|++|+++ +||
T Consensus       217 i~v~D~a~~i~~~~~~-~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~  295 (314)
T TIGR02197       217 VYVKDVVDVNLWLLEN-GVSGIFNLGTGRARSFNDLADAVFKALGKDEKIEYIPMPEALRGKYQYFTQADITKLRAAGYY  295 (314)
T ss_pred             EEHHHHHHHHHHHHhc-ccCceEEcCCCCCccHHHHHHHHHHHhCCCCcceeccCccccccccccccccchHHHHHhcCC
Confidence            9999999999999988 566789996 579999999999999997432 111111 11  1122346789999999 999


Q ss_pred             Cccc-cCCC
Q 039049          298 VGFK-SVPQ  305 (305)
Q Consensus       298 ~~~~-~l~e  305 (305)
                       +|+ +++|
T Consensus       296 -~p~~~l~~  303 (314)
T TIGR02197       296 -GPFTTLEE  303 (314)
T ss_pred             -CCcccHHH
Confidence             888 7754

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=100.00  E-value=3.5e-36  Score=259.75  Aligned_cols=288  Identities=22%  Similarity=0.227  Sum_probs=210.1

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEEEe
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVFHT   80 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi~~   80 (305)
                      +||||||+|+||+++++.|++.|++|+++.|.......  .+..... ..+++++.+|+.+.+.+.++++  ++|+|||+
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~   77 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPE--ALKRGER-ITRVTFVEGDLRDRELLDRLFEEHKIDAVIHF   77 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchh--hhhhhcc-ccceEEEECCCCCHHHHHHHHHhCCCcEEEEC
Confidence            68999999999999999999999999988654322111  1111110 1157788999999999999886  69999999


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHH
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYA  160 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  160 (305)
                      |+..............++.|+.++.+++++|.+. ++++||++||.++|+....    .+++|+++..|.      +.|+
T Consensus        78 ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~ss~~~~g~~~~----~~~~e~~~~~~~------~~y~  146 (328)
T TIGR01179        78 AGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQT-GVKKFIFSSSAAVYGEPSS----IPISEDSPLGPI------NPYG  146 (328)
T ss_pred             ccccCcchhhcCchhhhhhhHHHHHHHHHHHHhc-CCCEEEEecchhhcCCCCC----CCccccCCCCCC------CchH
Confidence            9986544344455667899999999999999988 8899999999987764322    467888877665      7799


Q ss_pred             HHHHHHHHHHHHHHHH-cCCcEEEEecCceecCCCCCC-------CCchHHHHHHHHhc--CCC-------C--CCCCCc
Q 039049          161 YAKTIAEKEAWRIAKD-CGIDMVVVNPSFVVGPLLAPQ-------PTSTLLLILAMVKG--LRG-------E--YPNTTV  221 (305)
Q Consensus       161 ~sK~~~E~~~~~~~~~-~~~~~~i~Rp~~v~G~~~~~~-------~~~~~~~~~~~~~~--~~~-------~--~~~~~~  221 (305)
                      .+|..+|.+++.++++ .+++++++||+.+||+.....       .......+.....+  ..+       .  .+...+
T Consensus       147 ~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  226 (328)
T TIGR01179       147 RSKLMSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVR  226 (328)
T ss_pred             HHHHHHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEE
Confidence            9999999999998877 799999999999999864321       11111222222221  111       1  123368


Q ss_pred             cceeHHHHHHHHHHhhccc---ccCceEEEe-cCCcCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCcccchhHHHH-hC
Q 039049          222 GFVHIDDVVGAHILAMEET---RASGRLICS-SSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFE-LG  296 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~---~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lg  296 (305)
                      +|+|++|+++++..++...   ..++.||++ ++.+|++|+++.+.+.+|...................++++++++ ||
T Consensus       227 ~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg  306 (328)
T TIGR01179       227 DYIHVMDLADAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDFPVELAPRRPGDPASLVADASKIRRELG  306 (328)
T ss_pred             eeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCcceEeCCCCCccccchhcchHHHHHHhC
Confidence            9999999999999998753   235679995 678999999999999997532111112222233455679999999 99


Q ss_pred             CCccc-c-CCC
Q 039049          297 FVGFK-S-VPQ  305 (305)
Q Consensus       297 ~~~~~-~-l~e  305 (305)
                      | +|+ + |+|
T Consensus       307 ~-~p~~~~l~~  316 (328)
T TIGR01179       307 W-QPKYTDLEI  316 (328)
T ss_pred             C-CCCcchHHH
Confidence            9 888 4 653

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=100.00  E-value=2.9e-37  Score=254.22  Aligned_cols=228  Identities=27%  Similarity=0.339  Sum_probs=189.7

Q ss_pred             EEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcC--CCEEEEec
Q 039049            4 YCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQG--VDGVFHTA   81 (305)
Q Consensus         4 ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~Vi~~a   81 (305)
                      |||||||||||++++++|+++|++|+.+.|+..........       .+++++.+|+.|.+.+.+++++  +|+|||+|
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~-------~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a   73 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK-------LNVEFVIGDLTDKEQLEKLLEKANIDVVIHLA   73 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH-------TTEEEEESETTSHHHHHHHHHHHTESEEEEEB
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc-------ceEEEEEeeccccccccccccccCceEEEEee
Confidence            79999999999999999999999999999987644321110       1789999999999999999984  59999999


Q ss_pred             cccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHHH
Q 039049           82 SPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAY  161 (305)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~  161 (305)
                      +..............++.|+.++.+++++|++. ++++|||+||..+|+...    ..+++|+++..|.      ++|+.
T Consensus        74 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~sS~~~y~~~~----~~~~~e~~~~~~~------~~Y~~  142 (236)
T PF01370_consen   74 AFSSNPESFEDPEEIIEANVQGTRNLLEAAREA-GVKRFIFLSSASVYGDPD----GEPIDEDSPINPL------SPYGA  142 (236)
T ss_dssp             SSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TTSEEEEEEEGGGGTSSS----SSSBETTSGCCHS------SHHHH
T ss_pred             ccccccccccccccccccccccccccccccccc-cccccccccccccccccc----ccccccccccccc------ccccc
Confidence            986421123456678899999999999999999 889999999999888762    2678999988776      88999


Q ss_pred             HHHHHHHHHHHHHHHcCCcEEEEecCceecCC--CCCCCCchHHHHHHHHhcCCCCC---CCCCccceeHHHHHHHHHHh
Q 039049          162 AKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPL--LAPQPTSTLLLILAMVKGLRGEY---PNTTVGFVHIDDVVGAHILA  236 (305)
Q Consensus       162 sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~v~D~a~~~~~~  236 (305)
                      +|..+|++++.+.+.++++++++||+++|||.  ..........++..+.++++...   ++..++|+|++|+|++++.+
T Consensus       143 ~K~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  222 (236)
T PF01370_consen  143 SKRAAEELLRDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAA  222 (236)
T ss_dssp             HHHHHHHHHHHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHH
Confidence            99999999999998899999999999999998  11222344667888888876443   34489999999999999999


Q ss_pred             hcccc-cCceEEEe
Q 039049          237 MEETR-ASGRLICS  249 (305)
Q Consensus       237 ~~~~~-~~~~~~~~  249 (305)
                      ++++. .++.||++
T Consensus       223 ~~~~~~~~~~yNig  236 (236)
T PF01370_consen  223 LENPKAAGGIYNIG  236 (236)
T ss_dssp             HHHSCTTTEEEEES
T ss_pred             HhCCCCCCCEEEeC
Confidence            99998 68889974

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=3.5e-36  Score=244.46  Aligned_cols=259  Identities=17%  Similarity=0.154  Sum_probs=216.5

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVF   78 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi   78 (305)
                      |+ |||||++|++|++|++.|. .+++|++++|..                       .|+.|++.+.+++.  ++|+||
T Consensus         1 M~-iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-----------------------~Ditd~~~v~~~i~~~~PDvVI   55 (281)
T COG1091           1 MK-ILITGANGQLGTELRRALP-GEFEVIATDRAE-----------------------LDITDPDAVLEVIRETRPDVVI   55 (281)
T ss_pred             Cc-EEEEcCCChHHHHHHHHhC-CCceEEeccCcc-----------------------ccccChHHHHHHHHhhCCCEEE
Confidence            55 9999999999999999998 668999997763                       59999999999997  679999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchh
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLW  158 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  158 (305)
                      |+|+.+....++++++..+.+|..++.++.++|++. |. ++||+||..|+.+...    .|+.|++++.|.      +.
T Consensus        56 n~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~-ga-~lVhiSTDyVFDG~~~----~~Y~E~D~~~P~------nv  123 (281)
T COG1091          56 NAAAYTAVDKAESEPELAFAVNATGAENLARAAAEV-GA-RLVHISTDYVFDGEKG----GPYKETDTPNPL------NV  123 (281)
T ss_pred             ECccccccccccCCHHHHHHhHHHHHHHHHHHHHHh-CC-eEEEeecceEecCCCC----CCCCCCCCCCCh------hh
Confidence            999999998888889999999999999999999999 75 7999999998877542    689999999999      99


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCC-CCCCCccceeHHHHHHHHHHhh
Q 039049          159 YAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGE-YPNTTVGFVHIDDVVGAHILAM  237 (305)
Q Consensus       159 Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~~~~  237 (305)
                      ||.||+++|..++.+    +-+..|+|.+.+||...   .++...++.....++.+. +.++..+.+++.|+|+++..++
T Consensus       124 YG~sKl~GE~~v~~~----~~~~~I~Rtswv~g~~g---~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll  196 (281)
T COG1091         124 YGRSKLAGEEAVRAA----GPRHLILRTSWVYGEYG---NNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELL  196 (281)
T ss_pred             hhHHHHHHHHHHHHh----CCCEEEEEeeeeecCCC---CCHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHH
Confidence            999999999999765    46889999999999874   345556667777776665 4566889999999999999999


Q ss_pred             cccccCceEEEec-CCcCHHHHHHHHHHhCCCC---CCCCCC---CCCCCCCCCcccchhHHHH-hCCCccccCC
Q 039049          238 EETRASGRLICSS-SVAHWSPIIEMLKATYPSY---PYESKC---SKQEGDNSPHSMDTSKLFE-LGFVGFKSVP  304 (305)
Q Consensus       238 ~~~~~~~~~~~~~-~~~s~~el~~~i~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~~~~-lg~~~~~~l~  304 (305)
                      +.....+.||+++ +..||.||++.|.+.++..   ..+...   ......+....++++|+.+ +|+ ++.+|+
T Consensus       197 ~~~~~~~~yH~~~~g~~Swydfa~~I~~~~~~~~~v~~~~~~~~~~~~a~RP~~S~L~~~k~~~~~g~-~~~~w~  270 (281)
T COG1091         197 EKEKEGGVYHLVNSGECSWYEFAKAIFEEAGVDGEVIEPIASAEYPTPAKRPANSSLDTKKLEKAFGL-SLPEWR  270 (281)
T ss_pred             hccccCcEEEEeCCCcccHHHHHHHHHHHhCCCccccccccccccCccCCCCcccccchHHHHHHhCC-CCccHH
Confidence            9887878999975 4679999999999998632   112111   2233345567899999999 999 877664

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=100.00  E-value=4.5e-38  Score=264.61  Aligned_cols=260  Identities=19%  Similarity=0.182  Sum_probs=187.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi~   79 (305)
                      ||||||||+|+||++|.+.|.+.|++|+++.|+                       ..|+.|.+.+.++++  ++|+|||
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-----------------------~~dl~d~~~~~~~~~~~~pd~Vin   57 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS-----------------------DLDLTDPEAVAKLLEAFKPDVVIN   57 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-----------------------CS-TTSHHHHHHHHHHH--SEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-----------------------hcCCCCHHHHHHHHHHhCCCeEec
Confidence            789999999999999999999999999999665                       358899999999886  6899999


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhH
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWY  159 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y  159 (305)
                      |||...+..++.++...+.+|+.++.+|+++|.+. ++ ++||+||..||.+..    ..|++|++++.|.      +.|
T Consensus        58 ~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~-~~-~li~~STd~VFdG~~----~~~y~E~d~~~P~------~~Y  125 (286)
T PF04321_consen   58 CAAYTNVDACEKNPEEAYAINVDATKNLAEACKER-GA-RLIHISTDYVFDGDK----GGPYTEDDPPNPL------NVY  125 (286)
T ss_dssp             ------HHHHHHSHHHHHHHHTHHHHHHHHHHHHC-T--EEEEEEEGGGS-SST----SSSB-TTS----S------SHH
T ss_pred             cceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHc-CC-cEEEeeccEEEcCCc----ccccccCCCCCCC------CHH
Confidence            99998776677788889999999999999999998 75 899999999987653    2689999999998      899


Q ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCC-CCCCccceeHHHHHHHHHHhhc
Q 039049          160 AYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEY-PNTTVGFVHIDDVVGAHILAME  238 (305)
Q Consensus       160 ~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~D~a~~~~~~~~  238 (305)
                      |.+|+++|+.++...    -+..|+|++.+||+..   ......++..+..++.+.. .+..++.+|++|+|+++..+++
T Consensus       126 G~~K~~~E~~v~~~~----~~~~IlR~~~~~g~~~---~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~  198 (286)
T PF04321_consen  126 GRSKLEGEQAVRAAC----PNALILRTSWVYGPSG---RNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIE  198 (286)
T ss_dssp             HHHHHHHHHHHHHH-----SSEEEEEE-SEESSSS---SSHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhc----CCEEEEecceecccCC---CchhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHH
Confidence            999999999997633    3899999999999932   2344455566666666554 4558899999999999999999


Q ss_pred             cccc----CceEEEe-cCCcCHHHHHHHHHHhCCCCC-----CCCC-CCCCCCCCCCcccchhHHHH-hCCCccccCC
Q 039049          239 ETRA----SGRLICS-SSVAHWSPIIEMLKATYPSYP-----YESK-CSKQEGDNSPHSMDTSKLFE-LGFVGFKSVP  304 (305)
Q Consensus       239 ~~~~----~~~~~~~-~~~~s~~el~~~i~~~~~~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~-lg~~~~~~l~  304 (305)
                      +...    .|+||++ ++.+|+.||++.+++.++...     .+.. .......+.+..+|++|+++ +|+ ++++|+
T Consensus       199 ~~~~~~~~~Giyh~~~~~~~S~~e~~~~i~~~~~~~~~~i~~~~~~~~~~~~~rp~~~~L~~~kl~~~~g~-~~~~~~  275 (286)
T PF04321_consen  199 KNLSGASPWGIYHLSGPERVSRYEFAEAIAKILGLDPELIKPVSSSEFPRAAPRPRNTSLDCRKLKNLLGI-KPPPWR  275 (286)
T ss_dssp             HHHH-GGG-EEEE---BS-EEHHHHHHHHHHHHTHCTTEEEEESSTTSTTSSGS-SBE-B--HHHHHCTTS----BHH
T ss_pred             hcccccccceeEEEecCcccCHHHHHHHHHHHhCCCCceEEecccccCCCCCCCCCcccccHHHHHHccCC-CCcCHH
Confidence            8654    6899996 578999999999999986432     1111 11233456678999999999 999 887664

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=100.00  E-value=2.1e-34  Score=244.77  Aligned_cols=272  Identities=20%  Similarity=0.209  Sum_probs=190.5

Q ss_pred             EEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEeccc
Q 039049            4 YCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTASP   83 (305)
Q Consensus         4 ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a~~   83 (305)
                      ||||||+||||+++++.|+++|++|++++|++.......          ...  ..|+.. +.+.+.+.++|+|||+|+.
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----------~~~--~~~~~~-~~~~~~~~~~D~Vvh~a~~   67 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK----------WEG--YKPWAP-LAESEALEGADAVINLAGE   67 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc----------cee--eecccc-cchhhhcCCCCEEEECCCC
Confidence            699999999999999999999999999999876432211          001  112222 3455667899999999997


Q ss_pred             cccCC--CCchhhhhhhhhHHHHHHHHHHHHhcCCcc--EEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhH
Q 039049           84 VLVPY--DNNIQATLIDPCIKGTLNVLSSCKKAKSVK--RVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWY  159 (305)
Q Consensus        84 ~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y  159 (305)
                      .....  ..+....++++|+.++.+++++|++. +++  +||+.||..+|+...    ..+++|++++.+.      +.|
T Consensus        68 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~i~~S~~~~yg~~~----~~~~~E~~~~~~~------~~~  136 (292)
T TIGR01777        68 PIADKRWTEERKQEIRDSRIDTTRALVEAIAAA-EQKPKVFISASAVGYYGTSE----DRVFTEEDSPAGD------DFL  136 (292)
T ss_pred             CcccccCCHHHHHHHHhcccHHHHHHHHHHHhc-CCCceEEEEeeeEEEeCCCC----CCCcCcccCCCCC------ChH
Confidence            55321  22345668899999999999999998 764  566666666666432    2577888754443      457


Q ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHH--HHHhcCCCCCCCCCccceeHHHHHHHHHHhh
Q 039049          160 AYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLIL--AMVKGLRGEYPNTTVGFVHIDDVVGAHILAM  237 (305)
Q Consensus       160 ~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~  237 (305)
                      +..+...|..+..+ ++.+++++++||+++||+....    ...++.  ....+.....++..++|+|++|+|+++..++
T Consensus       137 ~~~~~~~e~~~~~~-~~~~~~~~ilR~~~v~G~~~~~----~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l  211 (292)
T TIGR01777       137 AELCRDWEEAAQAA-EDLGTRVVLLRTGIVLGPKGGA----LAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFAL  211 (292)
T ss_pred             HHHHHHHHHHhhhc-hhcCCceEEEeeeeEECCCcch----hHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHHHh
Confidence            77777777776544 4568999999999999996321    111111  1111222223444899999999999999999


Q ss_pred             cccccCceEEEe-cCCcCHHHHHHHHHHhCCCC---CCCCCCCC------CCCCCCCcccchhHHHHhCCCccc--cCCC
Q 039049          238 EETRASGRLICS-SSVAHWSPIIEMLKATYPSY---PYESKCSK------QEGDNSPHSMDTSKLFELGFVGFK--SVPQ  305 (305)
Q Consensus       238 ~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~---~~~~~~~~------~~~~~~~~~~~~~~~~~lg~~~~~--~l~e  305 (305)
                      +++...+.||++ ++.+|+.|+++.+.+.+|..   ++|.+..+      ......+..++++|++++|| +|+  +++|
T Consensus       212 ~~~~~~g~~~~~~~~~~s~~di~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~  290 (292)
T TIGR01777       212 ENASISGPVNATAPEPVRNKEFAKALARALHRPAFFPVPAFVLRALLGEMADLLLKGQRVLPEKLLEAGF-QFQYPDLDE  290 (292)
T ss_pred             cCcccCCceEecCCCccCHHHHHHHHHHHhCCCCcCcCCHHHHHHHhchhhHHHhCCcccccHHHHhcCC-eeeCcChhh
Confidence            987677889996 57899999999999999742   22222111      11123466788999988999 888  4765

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=100.00  E-value=1.3e-34  Score=243.40  Aligned_cols=290  Identities=23%  Similarity=0.236  Sum_probs=212.5

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcC--CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKG--HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      |.+++||||+||+|+||++.|++++  .+|++++..+....-.......  ....++++++|+.|...+.+++.++ .|+
T Consensus         4 ~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~--~~~~v~~~~~D~~~~~~i~~a~~~~-~Vv   80 (361)
T KOG1430|consen    4 KLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGF--RSGRVTVILGDLLDANSISNAFQGA-VVV   80 (361)
T ss_pred             CCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcc--cCCceeEEecchhhhhhhhhhccCc-eEE
Confidence            4579999999999999999999998  7899998766422111111110  2447999999999999999999999 999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchh
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLW  158 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  158 (305)
                      |||+...+....++.+..+++|+.||.+++++|.+. +++++||+||..|+++...    ....+++.+.|.  .. .++
T Consensus        81 h~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~-~v~~lIYtSs~~Vvf~g~~----~~n~~E~~p~p~--~~-~d~  152 (361)
T KOG1430|consen   81 HCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKEL-GVKRLIYTSSAYVVFGGEP----IINGDESLPYPL--KH-IDP  152 (361)
T ss_pred             EeccccCccccccchhhheeecchhHHHHHHHHHHh-CCCEEEEecCceEEeCCee----cccCCCCCCCcc--cc-ccc
Confidence            999888877666667889999999999999999999 9999999999999988643    133333333332  11 167


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCC---CCCCCccceeHHHHHHHHHH
Q 039049          159 YAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGE---YPNTTVGFVHIDDVVGAHIL  235 (305)
Q Consensus       159 Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~D~a~~~~~  235 (305)
                      |+.||..+|++++..+...++.++++||..||||+.....   +.++..+..+....   -++...+|++++.++.+.+.
T Consensus       153 Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~---~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahil  229 (361)
T KOG1430|consen  153 YGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKRLL---PKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHIL  229 (361)
T ss_pred             cchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCcccc---HHHHHHHHccCceEEeeccccccceEEechhHHHHHH
Confidence            9999999999999887656799999999999999975433   33333444443322   23448999999999998887


Q ss_pred             hhcc-----ccc-CceEEEe-cCCcCHHHHHHHHHHhCCCC-C----CCCCCC--------------C----------CC
Q 039049          236 AMEE-----TRA-SGRLICS-SSVAHWSPIIEMLKATYPSY-P----YESKCS--------------K----------QE  279 (305)
Q Consensus       236 ~~~~-----~~~-~~~~~~~-~~~~s~~el~~~i~~~~~~~-~----~~~~~~--------------~----------~~  279 (305)
                      +...     +.. +..|+++ +.++...+++..+.+.+|-. +    .|....              .          .+
T Consensus       230 A~~aL~~~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~~~~~~p~~l~~~~~~l~e~~~~~l~p~~p~lt~~~v~  309 (361)
T KOG1430|consen  230 AARALLDKSPSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLPSSIKLPLFLSYFLAYLLEIVYFLLRPYQPILTRFRVA  309 (361)
T ss_pred             HHHHHHhcCCccCceEEEEeCCCcchhhHHHHHHHHhcCCCCCceeecchHHHHHHHHHHHHHHHhccCCCCCcChhhee
Confidence            7532     222 4468886 56787778888888888632 1    111100              0          11


Q ss_pred             CCCCCcccchhHHHH-hCCCccc-cCCC
Q 039049          280 GDNSPHSMDTSKLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       280 ~~~~~~~~~~~~~~~-lg~~~~~-~l~e  305 (305)
                      .......++.+|++. ||| .|. +++|
T Consensus       310 ~~~~~~~f~~~kA~~~lgY-~P~~~~~e  336 (361)
T KOG1430|consen  310 LLGVTRTFSIEKAKRELGY-KPLVSLEE  336 (361)
T ss_pred             eeccccccCHHHHHHhhCC-CCcCCHHH
Confidence            112357889999999 999 988 7764

>PLN02996 fatty acyl-CoA reductase

Probab=100.00  E-value=2.8e-34  Score=257.64  Aligned_cols=266  Identities=19%  Similarity=0.223  Sum_probs=189.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC---CeEEEEEeCCCcccchhhhh-h-------------ccC-----ccCceEEEEc
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG---HMVRTTVRDPEDLSKVGFLW-E-------------LNG-----AEERLKIMKA   59 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g---~~V~~~~r~~~~~~~~~~~~-~-------------~~~-----~~~~~~~~~~   59 (305)
                      |+|||||||||||++|++.|+..+   .+|+++.|..........+. .             .+.     ...+++++.+
T Consensus        12 k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~G   91 (491)
T PLN02996         12 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVPG   91 (491)
T ss_pred             CeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEec
Confidence            689999999999999999998764   36899999765433222211 0             000     0157899999


Q ss_pred             cCCC-------cchHHHHhcCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeecc
Q 039049           60 DLLM-------EGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYR  132 (305)
Q Consensus        60 D~~d-------~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~  132 (305)
                      |+.+       .+.+.++++++|+|||+||....   ..++...+++|+.++.+++++|++..++++|||+||.++|+..
T Consensus        92 Dl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~~  168 (491)
T PLN02996         92 DISYDDLGVKDSNLREEMWKEIDIVVNLAATTNF---DERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEK  168 (491)
T ss_pred             ccCCcCCCCChHHHHHHHHhCCCEEEECccccCC---cCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecCC
Confidence            9983       44467788899999999998774   2456678999999999999999886478899999999999864


Q ss_pred             CCCCCCcccCCCC-CC----------------------------------------CcccccccchhHHHHHHHHHHHHH
Q 039049          133 HDAQQVSPLNESH-WS----------------------------------------DPDYCKHYNLWYAYAKTIAEKEAW  171 (305)
Q Consensus       133 ~~~~~~~~~~E~~-~~----------------------------------------~~~~~~~~~~~Y~~sK~~~E~~~~  171 (305)
                      ...-.+.++++.. +.                                        .+.....+.+.|+.||+++|.+++
T Consensus       169 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~  248 (491)
T PLN02996        169 SGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLG  248 (491)
T ss_pred             CceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHHH
Confidence            3211112222111 00                                        000001112679999999999998


Q ss_pred             HHHHHcCCcEEEEecCceecCCCCCCCCch------HHHHHHHHhcCCC-CCCCC--CccceeHHHHHHHHHHhhccc--
Q 039049          172 RIAKDCGIDMVVVNPSFVVGPLLAPQPTST------LLLILAMVKGLRG-EYPNT--TVGFVHIDDVVGAHILAMEET--  240 (305)
Q Consensus       172 ~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~------~~~~~~~~~~~~~-~~~~~--~~~~i~v~D~a~~~~~~~~~~--  240 (305)
                      .+.  .+++++++||++|||++..+.....      ..++.....|... ..+++  .+||+||+|+|++++.++...  
T Consensus       249 ~~~--~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~  326 (491)
T PLN02996        249 NFK--ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHAG  326 (491)
T ss_pred             Hhc--CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHHhhc
Confidence            764  3899999999999999876532211      2233334445442 23444  899999999999999998753  


Q ss_pred             --ccCceEEEe-c--CCcCHHHHHHHHHHhCCCCCCC
Q 039049          241 --RASGRLICS-S--SVAHWSPIIEMLKATYPSYPYE  272 (305)
Q Consensus       241 --~~~~~~~~~-~--~~~s~~el~~~i~~~~~~~~~~  272 (305)
                        ..+.+||++ +  .++|+.|+++.+.+..+..|..
T Consensus       327 ~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p~~  363 (491)
T PLN02996        327 GQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNPWI  363 (491)
T ss_pred             cCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCCCc
Confidence              234579995 5  6899999999999988765544

>PLN00016 RNA-binding protein; Provisional

Probab=100.00  E-value=4.9e-34  Score=250.27  Aligned_cols=262  Identities=17%  Similarity=0.178  Sum_probs=190.4

Q ss_pred             CCcEEEe----CCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchh-----hhhhccCccCceEEEEccCCCcchHHHHh
Q 039049            1 MPEYCVT----GGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVG-----FLWELNGAEERLKIMKADLLMEGSFDEAI   71 (305)
Q Consensus         1 m~~ilIt----G~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~D~~d~~~~~~~~   71 (305)
                      |++||||    |||||||++|++.|+++||+|++++|+........     .+..+.  ..+++++.+|+.|   +.+++
T Consensus        52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d---~~~~~  126 (378)
T PLN00016         52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS--SAGVKTVWGDPAD---VKSKV  126 (378)
T ss_pred             cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh--hcCceEEEecHHH---HHhhh
Confidence            4689999    99999999999999999999999999875321110     000111  1258899999977   44444


Q ss_pred             --cCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCc
Q 039049           72 --QGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDP  149 (305)
Q Consensus        72 --~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~  149 (305)
                        .++|+|||+++.                +..++.+++++|++. ++++|||+||.++|+....    .+..|+++..|
T Consensus       127 ~~~~~d~Vi~~~~~----------------~~~~~~~ll~aa~~~-gvkr~V~~SS~~vyg~~~~----~p~~E~~~~~p  185 (378)
T PLN00016        127 AGAGFDVVYDNNGK----------------DLDEVEPVADWAKSP-GLKQFLFCSSAGVYKKSDE----PPHVEGDAVKP  185 (378)
T ss_pred             ccCCccEEEeCCCC----------------CHHHHHHHHHHHHHc-CCCEEEEEccHhhcCCCCC----CCCCCCCcCCC
Confidence              479999999653                134578999999998 9999999999998875422    46677766554


Q ss_pred             ccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCC-C--CCCccceeH
Q 039049          150 DYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEY-P--NTTVGFVHI  226 (305)
Q Consensus       150 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~i~v  226 (305)
                      .      +    +|..+|.+++    +.+++++++||+++||++....  ....++..+..+.++.+ +  ...++|+|+
T Consensus       186 ~------~----sK~~~E~~l~----~~~l~~~ilRp~~vyG~~~~~~--~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v  249 (378)
T PLN00016        186 K------A----GHLEVEAYLQ----KLGVNWTSFRPQYIYGPGNNKD--CEEWFFDRLVRGRPVPIPGSGIQLTQLGHV  249 (378)
T ss_pred             c------c----hHHHHHHHHH----HcCCCeEEEeceeEECCCCCCc--hHHHHHHHHHcCCceeecCCCCeeeceecH
Confidence            3      2    8999998774    4689999999999999975432  22334555666665543 2  337899999


Q ss_pred             HHHHHHHHHhhccccc-CceEEEe-cCCcCHHHHHHHHHHhCCCCC-CCC-CCCC--------CCCCCCCcccchhHHHH
Q 039049          227 DDVVGAHILAMEETRA-SGRLICS-SSVAHWSPIIEMLKATYPSYP-YES-KCSK--------QEGDNSPHSMDTSKLFE  294 (305)
Q Consensus       227 ~D~a~~~~~~~~~~~~-~~~~~~~-~~~~s~~el~~~i~~~~~~~~-~~~-~~~~--------~~~~~~~~~~~~~~~~~  294 (305)
                      +|+|+++..+++++.. ++.||++ ++.+|+.|+++.+.+.+|... +.. ....        .+.....+..|++|+++
T Consensus       250 ~Dva~ai~~~l~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~d~~ka~~  329 (378)
T PLN00016        250 KDLASMFALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGFPEEIVHYDPKAVGFGAKKAFPFRDQHFFASPRKAKE  329 (378)
T ss_pred             HHHHHHHHHHhcCccccCCEEEecCCCccCHHHHHHHHHHHhCCCCceeecCccccCccccccccccccccccCHHHHHH
Confidence            9999999999988643 5679996 568999999999999997532 110 1110        01122345579999999


Q ss_pred             -hCCCccc-cCCC
Q 039049          295 -LGFVGFK-SVPQ  305 (305)
Q Consensus       295 -lg~~~~~-~l~e  305 (305)
                       ||| +|+ +|+|
T Consensus       330 ~LGw-~p~~~l~e  341 (378)
T PLN00016        330 ELGW-TPKFDLVE  341 (378)
T ss_pred             hcCC-CCCCCHHH
Confidence             999 998 7754

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=1.2e-34  Score=221.88  Aligned_cols=275  Identities=21%  Similarity=0.208  Sum_probs=212.2

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCC--eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGH--MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDG   76 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~   76 (305)
                      |++||||||+|.+|+++.+.+...|.  +-.++.                      ..-.+|+++.++.+++|+  ++.+
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~----------------------~skd~DLt~~a~t~~lF~~ekPth   58 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFI----------------------GSKDADLTNLADTRALFESEKPTH   58 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCCCCcceEEe----------------------ccccccccchHHHHHHHhccCCce
Confidence            78999999999999999999988875  211221                      111378899888999986  7899


Q ss_pred             EEEeccccccCC-CCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCccccccc
Q 039049           77 VFHTASPVLVPY-DNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHY  155 (305)
Q Consensus        77 Vi~~a~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  155 (305)
                      |||+|+..+.-. ....+.+++..|+....|++..|-+. |++++|++.|.+.|.+...    +|++|+......++..+
T Consensus        59 VIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~-gv~K~vsclStCIfPdkt~----yPIdEtmvh~gpphpsN  133 (315)
T KOG1431|consen   59 VIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEH-GVKKVVSCLSTCIFPDKTS----YPIDETMVHNGPPHPSN  133 (315)
T ss_pred             eeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHh-chhhhhhhcceeecCCCCC----CCCCHHHhccCCCCCCc
Confidence            999999887643 55667789999999999999999999 9999999999886655432    79999887665544443


Q ss_pred             chhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC---chHHHHHHHH---hcCC---CCCCCC--Cccce
Q 039049          156 NLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPT---STLLLILAMV---KGLR---GEYPNT--TVGFV  224 (305)
Q Consensus       156 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~---~~~~~~~~~~---~~~~---~~~~~~--~~~~i  224 (305)
                       .+|..+|+++....+.|..++|...+.+-|+++|||..+....   .++.++++..   ....   ..+|.+  .|.|+
T Consensus       134 -~gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFi  212 (315)
T KOG1431|consen  134 -FGYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFI  212 (315)
T ss_pred             -hHHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHh
Confidence             6799999999999999999999999999999999998765432   3344554432   2222   234555  89999


Q ss_pred             eHHHHHHHHHHhhcccccCceEEEe-cC--CcCHHHHHHHHHHhCCCC-CCCCCCCCCCCCCCCcccchhHHHHhCCCcc
Q 039049          225 HIDDVVGAHILAMEETRASGRLICS-SS--VAHWSPIIEMLKATYPSY-PYESKCSKQEGDNSPHSMDTSKLFELGFVGF  300 (305)
Q Consensus       225 ~v~D~a~~~~~~~~~~~~~~~~~~~-~~--~~s~~el~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~  300 (305)
                      |++|+|+++++++++-+.-+-.+++ |+  .+|++|+++++.++.+-. ++.....+. .......+|++||+.|+| .|
T Consensus       213 ys~DLA~l~i~vlr~Y~~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l~~DttK~-DGq~kKtasnsKL~sl~p-d~  290 (315)
T KOG1431|consen  213 YSDDLADLFIWVLREYEGVEPIILSVGESDEVTIREAAEAVVEAVDFTGKLVWDTTKS-DGQFKKTASNSKLRSLLP-DF  290 (315)
T ss_pred             hHhHHHHHHHHHHHhhcCccceEeccCccceeEHHHHHHHHHHHhCCCceEEeeccCC-CCCcccccchHHHHHhCC-Cc
Confidence            9999999999999987765667764 65  899999999999998532 333333333 334556789999999988 77


Q ss_pred             c--cCCC
Q 039049          301 K--SVPQ  305 (305)
Q Consensus       301 ~--~l~e  305 (305)
                      +  +|++
T Consensus       291 ~ft~l~~  297 (315)
T KOG1431|consen  291 KFTPLEQ  297 (315)
T ss_pred             ccChHHH
Confidence            7  4653

>CHL00194 ycf39 Ycf39; Provisional

Probab=100.00  E-value=6e-34  Score=244.17  Aligned_cols=219  Identities=17%  Similarity=0.204  Sum_probs=169.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      |+|+|||||||||++|+++|+++||+|++++|+.++...   +.     ..+++++.+|+.|++.+.++++++|+|||++
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~---l~-----~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~   72 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASF---LK-----EWGAELVYGDLSLPETLPPSFKGVTAIIDAS   72 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhh---Hh-----hcCCEEEECCCCCHHHHHHHHCCCCEEEECC
Confidence            589999999999999999999999999999998643211   11     1268999999999999999999999999997


Q ss_pred             cccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHHH
Q 039049           82 SPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAY  161 (305)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~  161 (305)
                      +...     .......++|+.++.+++++|+++ +++||||+||..+...                 +.      .+|..
T Consensus        73 ~~~~-----~~~~~~~~~~~~~~~~l~~aa~~~-gvkr~I~~Ss~~~~~~-----------------~~------~~~~~  123 (317)
T CHL00194         73 TSRP-----SDLYNAKQIDWDGKLALIEAAKAA-KIKRFIFFSILNAEQY-----------------PY------IPLMK  123 (317)
T ss_pred             CCCC-----CCccchhhhhHHHHHHHHHHHHHc-CCCEEEEecccccccc-----------------CC------ChHHH
Confidence            6432     233447789999999999999999 9999999998543110                 00      45889


Q ss_pred             HHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCC--CCCCccceeHHHHHHHHHHhhcc
Q 039049          162 AKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEY--PNTTVGFVHIDDVVGAHILAMEE  239 (305)
Q Consensus       162 sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~D~a~~~~~~~~~  239 (305)
                      +|..+|++++    +++++++++||+.+|+.....       .......+.+...  ++..++|||++|+|+++..++++
T Consensus       124 ~K~~~e~~l~----~~~l~~tilRp~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~  192 (317)
T CHL00194        124 LKSDIEQKLK----KSGIPYTIFRLAGFFQGLISQ-------YAIPILEKQPIWITNESTPISYIDTQDAAKFCLKSLSL  192 (317)
T ss_pred             HHHHHHHHHH----HcCCCeEEEeecHHhhhhhhh-------hhhhhccCCceEecCCCCccCccCHHHHHHHHHHHhcC
Confidence            9999998874    568999999999888642111       1112222333222  23378999999999999999987


Q ss_pred             ccc-CceEEEe-cCCcCHHHHHHHHHHhCCC
Q 039049          240 TRA-SGRLICS-SSVAHWSPIIEMLKATYPS  268 (305)
Q Consensus       240 ~~~-~~~~~~~-~~~~s~~el~~~i~~~~~~  268 (305)
                      +.. ++.||++ ++.+|++|+++.+.+.+|.
T Consensus       193 ~~~~~~~~ni~g~~~~s~~el~~~~~~~~g~  223 (317)
T CHL00194        193 PETKNKTFPLVGPKSWNSSEIISLCEQLSGQ  223 (317)
T ss_pred             ccccCcEEEecCCCccCHHHHHHHHHHHhCC
Confidence            654 5679996 5689999999999999875

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=100.00  E-value=7.8e-34  Score=232.11  Aligned_cols=235  Identities=19%  Similarity=0.176  Sum_probs=181.7

Q ss_pred             EEEeCCcchHHHHHHHHHHHcC-CeEEEEEeCCCcccchhhhhhccCccCceE----EEEccCCCcchHHHHhc--CCCE
Q 039049            4 YCVTGGTGFIAAHLVKALLDKG-HMVRTTVRDPEDLSKVGFLWELNGAEERLK----IMKADLLMEGSFDEAIQ--GVDG   76 (305)
Q Consensus         4 ilItG~~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~----~~~~D~~d~~~~~~~~~--~~d~   76 (305)
                      ||||||+|.||+.||++|++.+ .++++++|++................+++.    .+.+|++|.+.+.++++  ++|+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi   80 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI   80 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence            7999999999999999999988 589999998765443322211001122343    45799999999999998  8999


Q ss_pred             EEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccc
Q 039049           77 VFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYN  156 (305)
Q Consensus        77 Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  156 (305)
                      |||+||.-+.+.++.++.+.+++|+.|+.|++++|.++ ++++||++||..+..+.                        
T Consensus        81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~-~v~~~v~ISTDKAv~Pt------------------------  135 (293)
T PF02719_consen   81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEH-GVERFVFISTDKAVNPT------------------------  135 (293)
T ss_dssp             EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHT-T-SEEEEEEECGCSS--------------------------
T ss_pred             EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEccccccCCCC------------------------
Confidence            99999999988778888899999999999999999999 99999999998875432                        


Q ss_pred             hhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCC--CCCCccceeHHHHHH
Q 039049          157 LWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEY--PNTTVGFVHIDDVVG  231 (305)
Q Consensus       157 ~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~D~a~  231 (305)
                      +.||.||+.+|+++..++...   +..++++|.|||.|..    .+..+.+..++.+|+++..  ++..|-|+.++++++
T Consensus       136 nvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~----GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~  211 (293)
T PF02719_consen  136 NVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSR----GSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQ  211 (293)
T ss_dssp             SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGT----TSCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCC----CcHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHH
Confidence            789999999999999987665   6899999999999975    3667778899999988776  445899999999999


Q ss_pred             HHHHhhcccccCceEEEe-cCCcCHHHHHHHHHHhCC
Q 039049          232 AHILAMEETRASGRLICS-SSVAHWSPIIEMLKATYP  267 (305)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~  267 (305)
                      .++.+......+++|.+. |+++++.|+++.+.+..|
T Consensus       212 Lvl~a~~~~~~geifvl~mg~~v~I~dlA~~~i~~~g  248 (293)
T PF02719_consen  212 LVLQAAALAKGGEIFVLDMGEPVKILDLAEAMIELSG  248 (293)
T ss_dssp             HHHHHHHH--TTEEEEE---TCEECCCHHHHHHHHTT
T ss_pred             HHHHHHhhCCCCcEEEecCCCCcCHHHHHHHHHhhcc
Confidence            999999988778888885 899999999999999997

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02778 3,5-epimerase/4-reductase

Probab=100.00  E-value=7.4e-32  Score=228.56  Aligned_cols=250  Identities=16%  Similarity=0.182  Sum_probs=176.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi~   79 (305)
                      |+||||||+||||++|++.|+++|++|+...+                          |+.|.+.+...++  ++|+|||
T Consensus        10 ~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~--------------------------~~~~~~~v~~~l~~~~~D~ViH   63 (298)
T PLN02778         10 LKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSG--------------------------RLENRASLEADIDAVKPTHVFN   63 (298)
T ss_pred             CeEEEECCCCHHHHHHHHHHHhCCCEEEEecC--------------------------ccCCHHHHHHHHHhcCCCEEEE
Confidence            68999999999999999999999999875321                          2333444555554  6899999


Q ss_pred             eccccccCC---CCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCC--CCcccCCCCCCCcccccc
Q 039049           80 TASPVLVPY---DNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQ--QVSPLNESHWSDPDYCKH  154 (305)
Q Consensus        80 ~a~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~--~~~~~~E~~~~~~~~~~~  154 (305)
                      +||......   +...+...+++|+.++.+++++|++. +++ ++++||.++|+.....+  ...+++|++++.+.    
T Consensus        64 ~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~-gv~-~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~----  137 (298)
T PLN02778         64 AAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRER-GLV-LTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFT----  137 (298)
T ss_pred             CCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCC-EEEEecceEeCCCCCCCcccCCCCCcCCCCCCC----
Confidence            999876431   34566779999999999999999998 886 56667777776432111  11357777765432    


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHH
Q 039049          155 YNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHI  234 (305)
Q Consensus       155 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  234 (305)
                       .+.|+.+|+++|.+++.+.     +..++|++.++|+...    ....++..+..+..+..-  ..+|+|++|++++++
T Consensus       138 -~s~Yg~sK~~~E~~~~~y~-----~~~~lr~~~~~~~~~~----~~~~fi~~~~~~~~~~~~--~~s~~yv~D~v~al~  205 (298)
T PLN02778        138 -GSFYSKTKAMVEELLKNYE-----NVCTLRVRMPISSDLS----NPRNFITKITRYEKVVNI--PNSMTILDELLPISI  205 (298)
T ss_pred             -CCchHHHHHHHHHHHHHhh-----ccEEeeecccCCcccc----cHHHHHHHHHcCCCeeEc--CCCCEEHHHHHHHHH
Confidence             1679999999999998775     4568898887876422    122356677666543221  247999999999999


Q ss_pred             HhhcccccCceEEEe-cCCcCHHHHHHHHHHhCCCC----CCCCCCC-C-CCCCCCCcccchhHHHH-hC
Q 039049          235 LAMEETRASGRLICS-SSVAHWSPIIEMLKATYPSY----PYESKCS-K-QEGDNSPHSMDTSKLFE-LG  296 (305)
Q Consensus       235 ~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~----~~~~~~~-~-~~~~~~~~~~~~~~~~~-lg  296 (305)
                      .+++... ++.||++ ++.+|+.||++.+++.++..    .+..... + ......+..+|++|+++ ++
T Consensus       206 ~~l~~~~-~g~yNigs~~~iS~~el~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Ld~~k~~~~~~  274 (298)
T PLN02778        206 EMAKRNL-TGIYNFTNPGVVSHNEILEMYRDYIDPSFTWKNFTLEEQAKVIVAPRSNNELDTTKLKREFP  274 (298)
T ss_pred             HHHhCCC-CCeEEeCCCCcccHHHHHHHHHHHhCCCceeccccHHHHHHHHhCCCccccccHHHHHHhcc
Confidence            9997644 4799995 67999999999999999741    1111110 0 11122234799999998 65

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.2e-31  Score=232.60  Aligned_cols=238  Identities=21%  Similarity=0.197  Sum_probs=205.3

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcC-CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcC--CCEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKG-HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQG--VDGV   77 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~V   77 (305)
                      .|+||||||+|-||+.+|+++++.+ .+++.++|++.+................+.++.+|++|.+.+.+++++  +|+|
T Consensus       250 gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd~V  329 (588)
T COG1086         250 GKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVDIV  329 (588)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCceE
Confidence            3789999999999999999999987 478999998765443322111111145788999999999999999996  9999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccch
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNL  157 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  157 (305)
                      ||+||.-+.+..+.++.+.+++|+.||+|++++|.+. ++++||.+||..+..+.                        |
T Consensus       330 fHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~-~V~~~V~iSTDKAV~Pt------------------------N  384 (588)
T COG1086         330 FHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKN-GVKKFVLISTDKAVNPT------------------------N  384 (588)
T ss_pred             EEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHh-CCCEEEEEecCcccCCc------------------------h
Confidence            9999999999899999999999999999999999999 99999999999876553                        8


Q ss_pred             hHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCC--CCccceeHHHHHHH
Q 039049          158 WYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPN--TTVGFVHIDDVVGA  232 (305)
Q Consensus       158 ~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~  232 (305)
                      .||.||+++|..+..+++..   +..++++|.|||.|..    .+..+.+..++.+|+++...+  ..|-|+.++|.++.
T Consensus       385 vmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSr----GSViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~L  460 (588)
T COG1086         385 VMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSR----GSVIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQL  460 (588)
T ss_pred             HhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCC----CCCHHHHHHHHHcCCCccccCCCceeEEEEHHHHHHH
Confidence            89999999999999987744   3899999999999975    356677888999999887654  48999999999999


Q ss_pred             HHHhhcccccCceEEEe-cCCcCHHHHHHHHHHhCC
Q 039049          233 HILAMEETRASGRLICS-SSVAHWSPIIEMLKATYP  267 (305)
Q Consensus       233 ~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~  267 (305)
                      ++.+......+.+|.+. |+++++.|+++.+.+..|
T Consensus       461 VlqA~a~~~gGeifvldMGepvkI~dLAk~mi~l~g  496 (588)
T COG1086         461 VLQAGAIAKGGEIFVLDMGEPVKIIDLAKAMIELAG  496 (588)
T ss_pred             HHHHHhhcCCCcEEEEcCCCCeEHHHHHHHHHHHhC
Confidence            99999987778889996 899999999999999886

>PRK05865 hypothetical protein; Provisional

Probab=100.00  E-value=6.6e-32  Score=251.24  Aligned_cols=236  Identities=24%  Similarity=0.233  Sum_probs=177.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      |+|+||||+||||+++++.|+++|++|++++|+.....           ..+++++.+|+.|.+.+.++++++|+|||||
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~~-----------~~~v~~v~gDL~D~~~l~~al~~vD~VVHlA   69 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDSW-----------PSSADFIAADIRDATAVESAMTGADVVAHCA   69 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhhc-----------ccCceEEEeeCCCHHHHHHHHhCCCEEEECC
Confidence            57999999999999999999999999999998753210           1257899999999999999999999999999


Q ss_pred             cccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHHH
Q 039049           82 SPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAY  161 (305)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~  161 (305)
                      +....         .+++|+.++.+++++|++. ++++|||+||..                                  
T Consensus        70 a~~~~---------~~~vNv~GT~nLLeAa~~~-gvkr~V~iSS~~----------------------------------  105 (854)
T PRK05865         70 WVRGR---------NDHINIDGTANVLKAMAET-GTGRIVFTSSGH----------------------------------  105 (854)
T ss_pred             Ccccc---------hHHHHHHHHHHHHHHHHHc-CCCeEEEECCcH----------------------------------
Confidence            86431         4689999999999999998 889999999842                                  


Q ss_pred             HHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCC--CccceeHHHHHHHHHHhhcc
Q 039049          162 AKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNT--TVGFVHIDDVVGAHILAMEE  239 (305)
Q Consensus       162 sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~v~D~a~~~~~~~~~  239 (305)
                       |.++|+++.    +++++++++||+++|||+..       .++...........+.+  .++|+|++|+|+++..+++.
T Consensus       106 -K~aaE~ll~----~~gl~~vILRp~~VYGP~~~-------~~i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~  173 (854)
T PRK05865        106 -QPRVEQMLA----DCGLEWVAVRCALIFGRNVD-------NWVQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALLD  173 (854)
T ss_pred             -HHHHHHHHH----HcCCCEEEEEeceEeCCChH-------HHHHHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHhC
Confidence             677787763    46899999999999999621       12333222211222333  57999999999999999875


Q ss_pred             cc-cCceEEEe-cCCcCHHHHHHHHHHhCCCCCCC--CCCC---CCCCCCCCcccchhHHHH-hCCCccc-cCCC
Q 039049          240 TR-ASGRLICS-SSVAHWSPIIEMLKATYPSYPYE--SKCS---KQEGDNSPHSMDTSKLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       240 ~~-~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~-lg~~~~~-~l~e  305 (305)
                      +. .++.||++ ++.+|++|+++.+.+.......+  ....   ..........+|++|+++ ||| +|+ +++|
T Consensus       174 ~~~~ggvyNIgsg~~~Si~EIae~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~D~sKar~~LGw-~P~~sLee  247 (854)
T PRK05865        174 TVIDSGPVNLAAPGELTFRRIAAALGRPMVPIGSPVLRRVTSFAELELLHSAPLMDVTLLRDRWGF-QPAWNAEE  247 (854)
T ss_pred             CCcCCCeEEEECCCcccHHHHHHHHhhhhccCCchhhhhccchhhhhcccCCccCCHHHHHHHhCC-CCCCCHHH
Confidence            43 46789996 67899999999998754211111  0000   011112245789999999 999 998 8764

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=3.1e-32  Score=215.88  Aligned_cols=292  Identities=18%  Similarity=0.111  Sum_probs=229.8

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchh-hhhhccCc-cCceEEEEccCCCcchHHHHhc--CCCE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVG-FLWELNGA-EERLKIMKADLLMEGSFDEAIQ--GVDG   76 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~--~~d~   76 (305)
                      ||+.||||-||+-|++|++.|+++|++|+++.|..+.....+ ++...++. ..++..+.+|++|...+.++++  ++|-
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~PdE   81 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPDE   81 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCchh
Confidence            477999999999999999999999999999999855332221 33333332 3458899999999999999997  6799


Q ss_pred             EEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCc--cEEEEeccceeeeccCCCCCCcccCCCCCCCcccccc
Q 039049           77 VFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSV--KRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKH  154 (305)
Q Consensus        77 Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  154 (305)
                      |+|+||......+.+.|....+++..|+.+|+++.+.. +.  .||...||+.-||....    .|.+|++|-.|.    
T Consensus        82 IYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~-~~~~~rfYQAStSE~fG~v~~----~pq~E~TPFyPr----  152 (345)
T COG1089          82 IYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRIL-GEKKTRFYQASTSELYGLVQE----IPQKETTPFYPR----  152 (345)
T ss_pred             heeccccccccccccCcceeeeechhHHHHHHHHHHHh-CCcccEEEecccHHhhcCccc----CccccCCCCCCC----
Confidence            99999999988888888889999999999999999987 43  48999999887776543    789999999988    


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCC--CchHHHHHHHHhcCC--CCCCCC--CccceeHHH
Q 039049          155 YNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQP--TSTLLLILAMVKGLR--GEYPNT--TVGFVHIDD  228 (305)
Q Consensus       155 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~--~~~~i~v~D  228 (305)
                        ++|+.+|..+--...-|-+.+|+-.|.=++.|-=+|......  ..+...+.++..|..  +.+|+-  .|||-|+.|
T Consensus       153 --SPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~D  230 (345)
T COG1089         153 --SPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKD  230 (345)
T ss_pred             --CHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHH
Confidence              999999999998888888889999988888887777654321  122333445555543  334543  999999999


Q ss_pred             HHHHHHHhhcccccCceEEE-ecCCcCHHHHHHHHHHhCCC-CC-----------------CCCCC-C--CCCCCCCCcc
Q 039049          229 VVGAHILAMEETRASGRLIC-SSSVAHWSPIIEMLKATYPS-YP-----------------YESKC-S--KQEGDNSPHS  286 (305)
Q Consensus       229 ~a~~~~~~~~~~~~~~~~~~-~~~~~s~~el~~~i~~~~~~-~~-----------------~~~~~-~--~~~~~~~~~~  286 (305)
                      .+++++..++++.+ ..|++ +|+..|++||+++..+..|. ..                 ..... +  -++.......
T Consensus       231 YVe~mwlmLQq~~P-ddyViATg~t~sVrefv~~Af~~~g~~l~w~g~g~~e~g~da~~G~~~V~idp~~fRPaEV~~Ll  309 (345)
T COG1089         231 YVEAMWLMLQQEEP-DDYVIATGETHSVREFVELAFEMVGIDLEWEGTGVDEKGVDAKTGKIIVEIDPRYFRPAEVDLLL  309 (345)
T ss_pred             HHHHHHHHHccCCC-CceEEecCceeeHHHHHHHHHHHcCceEEEeeccccccccccccCceeEEECccccCchhhhhhc
Confidence            99999999998774 56766 69999999999999999862 01                 00000 0  1555666788


Q ss_pred             cchhHHHH-hCCCccc-cCCC
Q 039049          287 MDTSKLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       287 ~~~~~~~~-lg~~~~~-~l~e  305 (305)
                      .|.+|+++ ||| +|+ +|+|
T Consensus       310 gdp~KA~~~LGW-~~~~~~~e  329 (345)
T COG1089         310 GDPTKAKEKLGW-RPEVSLEE  329 (345)
T ss_pred             CCHHHHHHHcCC-ccccCHHH
Confidence            99999999 999 998 8764

>TIGR01746 Thioester-redct thioester reductase domain

Probab=100.00  E-value=3.5e-31  Score=232.00  Aligned_cols=254  Identities=19%  Similarity=0.159  Sum_probs=182.0

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcC--CeEEEEEeCCCcccchhhhhh------ccC--cc-CceEEEEccCCCc------c
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKG--HMVRTTVRDPEDLSKVGFLWE------LNG--AE-ERLKIMKADLLME------G   65 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~------~~~--~~-~~~~~~~~D~~d~------~   65 (305)
                      +|+|||||||||++|++.|+++|  ++|++++|+.+.......+..      ...  .. .+++++.+|+.++      +
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            68999999999999999999998  679999998753321111111      000  01 4789999998754      4


Q ss_pred             hHHHHhcCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           66 SFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        66 ~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      .+..+.+++|+|||+|+....   ..+.....+.|+.++.+++++|.+. ++++|||+||.++++....    .+..|++
T Consensus        81 ~~~~~~~~~d~vih~a~~~~~---~~~~~~~~~~nv~g~~~ll~~a~~~-~~~~~v~iSS~~v~~~~~~----~~~~~~~  152 (367)
T TIGR01746        81 EWERLAENVDTIVHNGALVNW---VYPYSELRAANVLGTREVLRLAASG-RAKPLHYVSTISVLAAIDL----STVTEDD  152 (367)
T ss_pred             HHHHHHhhCCEEEeCCcEecc---CCcHHHHhhhhhHHHHHHHHHHhhC-CCceEEEEccccccCCcCC----CCccccc
Confidence            566777899999999998753   3345667889999999999999988 8889999999998875422    2234444


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC---chHHHHHHHHhcCCCCCCCC-Cc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPT---STLLLILAMVKGLRGEYPNT-TV  221 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~  221 (305)
                      +..+.... ..+.|+.+|+.+|.+++.+.+ .+++++++||+.+||+.......   ....++.............+ ..
T Consensus       153 ~~~~~~~~-~~~~Y~~sK~~~E~~~~~~~~-~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  230 (367)
T TIGR01746       153 AIVTPPPG-LAGGYAQSKWVAELLVREASD-RGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDSPELTE  230 (367)
T ss_pred             cccccccc-cCCChHHHHHHHHHHHHHHHh-cCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCCCcccc
Confidence            33221111 126799999999999988754 49999999999999974332111   11223333332222222232 67


Q ss_pred             cceeHHHHHHHHHHhhccccc---CceEEEe-cCCcCHHHHHHHHHHhCC
Q 039049          222 GFVHIDDVVGAHILAMEETRA---SGRLICS-SSVAHWSPIIEMLKATYP  267 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~~~---~~~~~~~-~~~~s~~el~~~i~~~~~  267 (305)
                      +|+|++|++++++.++..+..   ++.||++ ++.+++.|+++.+.+ .|
T Consensus       231 ~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g  279 (367)
T TIGR01746       231 DLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AG  279 (367)
T ss_pred             CcccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cC
Confidence            899999999999999887654   5679996 578999999999998 54

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=100.00  E-value=4.1e-31  Score=231.61  Aligned_cols=228  Identities=16%  Similarity=0.065  Sum_probs=174.8

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc----CCCE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ----GVDG   76 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----~~d~   76 (305)
                      +++|+|||||||||+++++.|+++|++|++++|+..+..............++++++++|+.|++.+.++++    ++|+
T Consensus        60 ~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~D~  139 (390)
T PLN02657         60 DVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPVDV  139 (390)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCCcE
Confidence            478999999999999999999999999999999875432111001011112378999999999999999987    5999


Q ss_pred             EEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccc
Q 039049           77 VFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYN  156 (305)
Q Consensus        77 Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  156 (305)
                      ||||++....     .....+++|+.++.+++++|++. ++++||++||.+++.+                  .      
T Consensus       140 Vi~~aa~~~~-----~~~~~~~vn~~~~~~ll~aa~~~-gv~r~V~iSS~~v~~p------------------~------  189 (390)
T PLN02657        140 VVSCLASRTG-----GVKDSWKIDYQATKNSLDAGREV-GAKHFVLLSAICVQKP------------------L------  189 (390)
T ss_pred             EEECCccCCC-----CCccchhhHHHHHHHHHHHHHHc-CCCEEEEEeeccccCc------------------c------
Confidence            9999885331     11235688999999999999998 9999999999875421                  1      


Q ss_pred             hhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCC-CCCC--Cc-cceeHHHHHHH
Q 039049          157 LWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGE-YPNT--TV-GFVHIDDVVGA  232 (305)
Q Consensus       157 ~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~-~~i~v~D~a~~  232 (305)
                      ..|..+|..+|..++.  ...+++++++||+.+||+..        ..+..+..+.+.. ++++  .+ ++||++|+|++
T Consensus       190 ~~~~~sK~~~E~~l~~--~~~gl~~tIlRp~~~~~~~~--------~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~  259 (390)
T PLN02657        190 LEFQRAKLKFEAELQA--LDSDFTYSIVRPTAFFKSLG--------GQVEIVKDGGPYVMFGDGKLCACKPISEADLASF  259 (390)
T ss_pred             hHHHHHHHHHHHHHHh--ccCCCCEEEEccHHHhcccH--------HHHHhhccCCceEEecCCcccccCceeHHHHHHH
Confidence            5589999999998865  35799999999999997531        1233444555543 4555  23 57999999999


Q ss_pred             HHHhhccccc-CceEEEec--CCcCHHHHHHHHHHhCCC
Q 039049          233 HILAMEETRA-SGRLICSS--SVAHWSPIIEMLKATYPS  268 (305)
Q Consensus       233 ~~~~~~~~~~-~~~~~~~~--~~~s~~el~~~i~~~~~~  268 (305)
                      +..+++++.. +..||+++  +.+|++|+++.+.+.+|.
T Consensus       260 i~~~~~~~~~~~~~~~Iggp~~~~S~~Eia~~l~~~lG~  298 (390)
T PLN02657        260 IADCVLDESKINKVLPIGGPGKALTPLEQGEMLFRILGK  298 (390)
T ss_pred             HHHHHhCccccCCEEEcCCCCcccCHHHHHHHHHHHhCC
Confidence            9999976543 56799964  489999999999999975

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.98  E-value=8.2e-31  Score=246.22  Aligned_cols=250  Identities=20%  Similarity=0.186  Sum_probs=180.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHH--HcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCc------chHHHHhcC
Q 039049            2 PEYCVTGGTGFIAAHLVKALL--DKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME------GSFDEAIQG   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~--~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~------~~~~~~~~~   73 (305)
                      |+|||||||||||++|++.|+  +.|++|++++|+.... ....+... ....+++++.+|+.|+      +.+.++ ++
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~-~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~   77 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLS-RLEALAAY-WGADRVVPLVGDLTEPGLGLSEADIAEL-GD   77 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHH-HHHHHHHh-cCCCcEEEEecccCCccCCcCHHHHHHh-cC
Confidence            589999999999999999999  5799999999965321 11111110 0114789999999984      345555 89


Q ss_pred             CCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCccccc
Q 039049           74 VDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCK  153 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~  153 (305)
                      +|+|||||+.....   .......++|+.++.+++++|++. ++++|||+||..+|+...     .+.+|++...+... 
T Consensus        78 ~D~Vih~Aa~~~~~---~~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~~SS~~v~g~~~-----~~~~e~~~~~~~~~-  147 (657)
T PRK07201         78 IDHVVHLAAIYDLT---ADEEAQRAANVDGTRNVVELAERL-QAATFHHVSSIAVAGDYE-----GVFREDDFDEGQGL-  147 (657)
T ss_pred             CCEEEECceeecCC---CCHHHHHHHHhHHHHHHHHHHHhc-CCCeEEEEeccccccCcc-----CccccccchhhcCC-
Confidence            99999999976532   234557899999999999999998 889999999999886532     34455543322211 


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC---c---hHHHHHHHHhcCC-C-CC--CCCCccc
Q 039049          154 HYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPT---S---TLLLILAMVKGLR-G-EY--PNTTVGF  223 (305)
Q Consensus       154 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~---~---~~~~~~~~~~~~~-~-~~--~~~~~~~  223 (305)
                        .+.|+.+|+++|++++.   ..+++++++||+++||+.......   .   ....+........ . ..  +.+..++
T Consensus       148 --~~~Y~~sK~~~E~~~~~---~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (657)
T PRK07201        148 --PTPYHRTKFEAEKLVRE---ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNI  222 (657)
T ss_pred             --CCchHHHHHHHHHHHHH---cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeee
Confidence              16699999999999864   358999999999999986543211   1   1122222211111 1 11  2337899


Q ss_pred             eeHHHHHHHHHHhhccccc-CceEEEe-cCCcCHHHHHHHHHHhCCCC
Q 039049          224 VHIDDVVGAHILAMEETRA-SGRLICS-SSVAHWSPIIEMLKATYPSY  269 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~~-~~~~~~~-~~~~s~~el~~~i~~~~~~~  269 (305)
                      +|++|+++++..+++.+.. ++.||++ ++.+|+.|+++.+.+.+|..
T Consensus       223 v~vddva~ai~~~~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~  270 (657)
T PRK07201        223 VPVDYVADALDHLMHKDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAP  270 (657)
T ss_pred             eeHHHHHHHHHHHhcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCC
Confidence            9999999999999886544 5589996 57999999999999998653

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.97  E-value=9.2e-30  Score=202.11  Aligned_cols=268  Identities=19%  Similarity=0.225  Sum_probs=189.4

Q ss_pred             EEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-CCCEEEEecc
Q 039049            4 YCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-GVDGVFHTAS   82 (305)
Q Consensus         4 ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-~~d~Vi~~a~   82 (305)
                      |+|||||||||++|+..|.+.||+|++++|++........        ..++       ..+.+....+ ++|+|||+||
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~--------~~v~-------~~~~~~~~~~~~~DavINLAG   65 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH--------PNVT-------LWEGLADALTLGIDAVINLAG   65 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC--------cccc-------ccchhhhcccCCCCEEEECCC
Confidence            6899999999999999999999999999999875432110        0111       1223444444 7999999999


Q ss_pred             ccccCC--CCchhhhhhhhhHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhH
Q 039049           83 PVLVPY--DNNIQATLIDPCIKGTLNVLSSCKKAK-SVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWY  159 (305)
Q Consensus        83 ~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y  159 (305)
                      ..-...  +.+..+...+.-+..|..|.++..+.. ..+.+|..|.++ ||+...   +..++|++++...+.       
T Consensus        66 ~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvG-yYG~~~---~~~~tE~~~~g~~Fl-------  134 (297)
T COG1090          66 EPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVG-YYGHSG---DRVVTEESPPGDDFL-------  134 (297)
T ss_pred             CccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEE-EecCCC---ceeeecCCCCCCChH-------
Confidence            776543  456678889999999999999987542 445666666665 444333   378999977665432       


Q ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhcc
Q 039049          160 AYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEE  239 (305)
Q Consensus       160 ~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  239 (305)
                      +..-..=|+....+ +..|.+++++|.|+|.|+.... +.. +....+...|.++..|.++.+|||++|+++++.+++++
T Consensus       135 a~lc~~WE~~a~~a-~~~gtRvvllRtGvVLs~~GGa-L~~-m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~  211 (297)
T COG1090         135 AQLCQDWEEEALQA-QQLGTRVVLLRTGVVLSPDGGA-LGK-MLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLEN  211 (297)
T ss_pred             HHHHHHHHHHHhhh-hhcCceEEEEEEEEEecCCCcc-hhh-hcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhC
Confidence            22222225544443 4569999999999999986432 111 11223444556666667799999999999999999999


Q ss_pred             cccCceEEEe-cCCcCHHHHHHHHHHhCCC---CCCCCCCCC------CCCCCCCcccchhHHHHhCCCccc
Q 039049          240 TRASGRLICS-SSVAHWSPIIEMLKATYPS---YPYESKCSK------QEGDNSPHSMDTSKLFELGFVGFK  301 (305)
Q Consensus       240 ~~~~~~~~~~-~~~~s~~el~~~i~~~~~~---~~~~~~~~~------~~~~~~~~~~~~~~~~~lg~~~~~  301 (305)
                      ..-.|.||++ ..+++.++|.+.+.+++.+   .++|....+      ...-...+.+-.+|+.+.|| +++
T Consensus       212 ~~lsGp~N~taP~PV~~~~F~~al~r~l~RP~~~~vP~~~~rl~LGe~a~~lL~gQrvlP~kl~~aGF-~F~  282 (297)
T COG1090         212 EQLSGPFNLTAPNPVRNKEFAHALGRALHRPAILPVPSFALRLLLGEMADLLLGGQRVLPKKLEAAGF-QFQ  282 (297)
T ss_pred             cCCCCcccccCCCcCcHHHHHHHHHHHhCCCccccCcHHHHHHHhhhhHHHHhccchhhHHHHHHCCC-eee
Confidence            9999999996 6799999999999999964   244433221      22234556777788888788 776

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.97  E-value=3.5e-30  Score=213.14  Aligned_cols=223  Identities=22%  Similarity=0.260  Sum_probs=130.3

Q ss_pred             EeCCcchHHHHHHHHHHHcCC--eEEEEEeCCCcccchhhhhhc-c----------CccCceEEEEccCCCc------ch
Q 039049            6 VTGGTGFIAAHLVKALLDKGH--MVRTTVRDPEDLSKVGFLWEL-N----------GAEERLKIMKADLLME------GS   66 (305)
Q Consensus         6 ItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~-~----------~~~~~~~~~~~D~~d~------~~   66 (305)
                      |||||||+|++|+++|++.+.  +|+++.|..+.......+... .          ...++++++.+|+.++      +.
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999986  999999987643333333111 0          1146899999999874      46


Q ss_pred             HHHHhcCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           67 FDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        67 ~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      +..+.+++|+||||||....   ..+.....+.|+.++.++++.|.+. ..++|+|+||..+.+.......+....+...
T Consensus        81 ~~~L~~~v~~IiH~Aa~v~~---~~~~~~~~~~NV~gt~~ll~la~~~-~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~  156 (249)
T PF07993_consen   81 YQELAEEVDVIIHCAASVNF---NAPYSELRAVNVDGTRNLLRLAAQG-KRKRFHYISTAYVAGSRPGTIEEKVYPEEED  156 (249)
T ss_dssp             HHHHHHH--EEEE--SS-SB---S-S--EEHHHHHHHHHHHHHHHTSS-S---EEEEEEGGGTTS-TTT--SSS-HHH--
T ss_pred             hhccccccceeeecchhhhh---cccchhhhhhHHHHHHHHHHHHHhc-cCcceEEeccccccCCCCCcccccccccccc
Confidence            77777899999999999884   3455668899999999999999976 5669999999443332221100011001111


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCC--Cc-hHHHH-HHHHhcCCCCC-C--CC
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQP--TS-TLLLI-LAMVKGLRGEY-P--NT  219 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~--~~-~~~~~-~~~~~~~~~~~-~--~~  219 (305)
                      . ........+.|..||+++|++++.+.++.|++++|+||+.|+|.......  .. ...++ .....+..... +  +.
T Consensus       157 ~-~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  235 (249)
T PF07993_consen  157 D-LDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDA  235 (249)
T ss_dssp             E-EE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---T
T ss_pred             c-chhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCCc
Confidence            1 11111122789999999999999999888999999999999994333211  11 23333 33333433322 2  23


Q ss_pred             CccceeHHHHHHHH
Q 039049          220 TVGFVHIDDVVGAH  233 (305)
Q Consensus       220 ~~~~i~v~D~a~~~  233 (305)
                      ..++++||.+|++|
T Consensus       236 ~~d~vPVD~va~aI  249 (249)
T PF07993_consen  236 RLDLVPVDYVARAI  249 (249)
T ss_dssp             T--EEEHHHHHHHH
T ss_pred             eEeEECHHHHHhhC
Confidence            69999999999986

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK12320 hypothetical protein; Provisional

Probab=99.96  E-value=4.1e-28  Score=221.70  Aligned_cols=233  Identities=19%  Similarity=0.193  Sum_probs=168.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      ||||||||+||||++|++.|+++|++|++++|.+....           ..+++++++|+.++. +.+++.++|+|||+|
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~~-----------~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLA   68 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDAL-----------DPRVDYVCASLRNPV-LQELAGEADAVIHLA   68 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhcc-----------cCCceEEEccCCCHH-HHHHhcCCCEEEEcC
Confidence            57999999999999999999999999999998654210           126789999999984 778888999999999


Q ss_pred             cccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHHH
Q 039049           82 SPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAY  161 (305)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~  161 (305)
                      +....     .   ...+|+.++.|++++|++. ++ ++||+||..  +. +                       ..|. 
T Consensus        69 a~~~~-----~---~~~vNv~Gt~nLleAA~~~-Gv-RiV~~SS~~--G~-~-----------------------~~~~-  111 (699)
T PRK12320         69 PVDTS-----A---PGGVGITGLAHVANAAARA-GA-RLLFVSQAA--GR-P-----------------------ELYR-  111 (699)
T ss_pred             ccCcc-----c---hhhHHHHHHHHHHHHHHHc-CC-eEEEEECCC--CC-C-----------------------cccc-
Confidence            87431     1   1258999999999999998 76 799999862  21 0                       1132 


Q ss_pred             HHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCC-CchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhccc
Q 039049          162 AKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQP-TSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       162 sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  240 (305)
                         .+|.++.    .++++++++|++++||+...... .....++.....++       ...+||++|++++++.+++.+
T Consensus       112 ---~aE~ll~----~~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~~-------pI~vIyVdDvv~alv~al~~~  177 (699)
T PRK12320        112 ---QAETLVS----TGWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSAR-------PIRVLHLDDLVRFLVLALNTD  177 (699)
T ss_pred             ---HHHHHHH----hcCCCEEEEeCceecCCCCcccHhHHHHHHHHHHHcCC-------ceEEEEHHHHHHHHHHHHhCC
Confidence               3566553    35689999999999999643321 12222333322222       345699999999999999864


Q ss_pred             ccCceEEEe-cCCcCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCcccchhHHHH-hCCCccc-cCC
Q 039049          241 RASGRLICS-SSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFE-LGFVGFK-SVP  304 (305)
Q Consensus       241 ~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lg~~~~~-~l~  304 (305)
                      . .++||++ ++.+|+.|+++.+....+.....     ...+.....-+.+..+. ++| +|+ +|+
T Consensus       178 ~-~GiyNIG~~~~~Si~el~~~i~~~~p~~~~~-----~~~~~~~~~pdi~~a~~~~~w-~~~~~~~  237 (699)
T PRK12320        178 R-NGVVDLATPDTTNVVTAWRLLRSVDPHLRTR-----RVRSWEQLIPEVDIAAVQEDW-NFEFGWQ  237 (699)
T ss_pred             C-CCEEEEeCCCeeEHHHHHHHHHHhCCCcccc-----ccccHHHhCCCCchhhhhcCC-CCcchHH
Confidence            3 4699995 67999999999997774322111     22233345667777788 899 888 664

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.96  E-value=3.2e-28  Score=220.11  Aligned_cols=263  Identities=21%  Similarity=0.238  Sum_probs=179.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC---eEEEEEeCCCcccchhhhh-h------------ccC------ccCceEEEEc
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH---MVRTTVRDPEDLSKVGFLW-E------------LNG------AEERLKIMKA   59 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~---~V~~~~r~~~~~~~~~~~~-~------------~~~------~~~~~~~~~~   59 (305)
                      |+|||||||||||++|++.|++.+.   +|+++.|..........+. .            ..+      ...++.++.+
T Consensus       120 k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~G  199 (605)
T PLN02503        120 KNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVVG  199 (605)
T ss_pred             CEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEEe
Confidence            7899999999999999999998754   6899999765433222221 1            001      1347899999


Q ss_pred             cCCCc------chHHHHhcCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccC
Q 039049           60 DLLME------GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRH  133 (305)
Q Consensus        60 D~~d~------~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~  133 (305)
                      |+.++      +..+.+.+++|+|||+|+....   ..+....+++|+.++.+++++|++.+++++|||+||+++|+...
T Consensus       200 Dl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f---~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~  276 (605)
T PLN02503        200 NVCESNLGLEPDLADEIAKEVDVIINSAANTTF---DERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQ  276 (605)
T ss_pred             eCCCcccCCCHHHHHHHHhcCCEEEECcccccc---ccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCCC
Confidence            99986      3556666789999999999873   34566789999999999999998874678999999999998753


Q ss_pred             CCCCCcccCCCC-----------------CCCc-------------------------------ccccccchhHHHHHHH
Q 039049          134 DAQQVSPLNESH-----------------WSDP-------------------------------DYCKHYNLWYAYAKTI  165 (305)
Q Consensus       134 ~~~~~~~~~E~~-----------------~~~~-------------------------------~~~~~~~~~Y~~sK~~  165 (305)
                      ..-.+.+++..+                 +.++                               .......+.|..+|.+
T Consensus       277 G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~l  356 (605)
T PLN02503        277 GRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAM  356 (605)
T ss_pred             CeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHHH
Confidence            111112222000                 0000                               0001113889999999


Q ss_pred             HHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCc------hHHHHHHHHhcCCC-CC--CCCCccceeHHHHHHHHHHh
Q 039049          166 AEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTS------TLLLILAMVKGLRG-EY--PNTTVGFVHIDDVVGAHILA  236 (305)
Q Consensus       166 ~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~------~~~~~~~~~~~~~~-~~--~~~~~~~i~v~D~a~~~~~~  236 (305)
                      +|.+++.+.  .+++++|+||+.|.+....|....      ....+.....|... ..  ++...|+|+||.++.+++.+
T Consensus       357 AE~lV~~~~--~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i~a  434 (605)
T PLN02503        357 GEMVINSMR--GDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVNATLAA  434 (605)
T ss_pred             HHHHHHHhc--CCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHHHHHHH
Confidence            999998653  589999999999955333221110      00111111233221 12  33489999999999999998


Q ss_pred             hcc-c----ccCceEEEe-c--CCcCHHHHHHHHHHhCCCC
Q 039049          237 MEE-T----RASGRLICS-S--SVAHWSPIIEMLKATYPSY  269 (305)
Q Consensus       237 ~~~-~----~~~~~~~~~-~--~~~s~~el~~~i~~~~~~~  269 (305)
                      +.. .    ....+||++ +  +++++.++.+.+.+.....
T Consensus       435 ~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~~  475 (605)
T PLN02503        435 MAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKSS  475 (605)
T ss_pred             HHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhhC
Confidence            432 1    235689995 5  6999999999999876443

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.96  E-value=3.6e-28  Score=202.07  Aligned_cols=257  Identities=19%  Similarity=0.188  Sum_probs=176.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhhhhhccC--------ccCceEEEEccCC------Ccch
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGFLWELNG--------AEERLKIMKADLL------MEGS   66 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~--------~~~~~~~~~~D~~------d~~~   66 (305)
                      +++|+||||||+|++|+..|+.+-. +|+|++|-.+.+.....+.....        ..++++.+-+|+.      +...
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            5799999999999999999998764 99999998876555555544322        3468999999996      3556


Q ss_pred             HHHHhcCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           67 FDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        67 ~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      +.++.+.+|.|||+||.+.   +..+.......|+.|+..+++.|... .+|.|+|+||.++.............+|.++
T Consensus        81 ~~~La~~vD~I~H~gA~Vn---~v~pYs~L~~~NVlGT~evlrLa~~g-k~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~  156 (382)
T COG3320          81 WQELAENVDLIIHNAALVN---HVFPYSELRGANVLGTAEVLRLAATG-KPKPLHYVSSISVGETEYYSNFTVDFDEISP  156 (382)
T ss_pred             HHHHhhhcceEEecchhhc---ccCcHHHhcCcchHhHHHHHHHHhcC-CCceeEEEeeeeeccccccCCCccccccccc
Confidence            8888889999999999988   56778889999999999999999887 7788999999998765422211122222222


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC--ch-HHHHHHHHhcCCCCCCCCCccc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPT--ST-LLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                      ...... ...++|+.||+.+|.+++.+.+. |++++|+||++|.|+.......  .+ ..++.....-..........+.
T Consensus       157 ~~~~~~-~~~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P~~~~~~~~  234 (382)
T COG3320         157 TRNVGQ-GLAGGYGRSKWVAEKLVREAGDR-GLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAPDSEYSLDM  234 (382)
T ss_pred             cccccC-ccCCCcchhHHHHHHHHHHHhhc-CCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCCCcccchhh
Confidence            221111 11277999999999999999866 9999999999999987633222  11 2222222222222211224445


Q ss_pred             eeHHHHHHHHHHhhccc------------ccCceEEE--ecCCcCHHHHHHHHHH
Q 039049          224 VHIDDVVGAHILAMEET------------RASGRLIC--SSSVAHWSPIIEMLKA  264 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~------------~~~~~~~~--~~~~~s~~el~~~i~~  264 (305)
                      +.++.+++++.......            .....|++  -+..+...++.+.+.+
T Consensus       235 ~p~~~v~~~v~~~~~~~~~~~~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~  289 (382)
T COG3320         235 LPVDHVARAVVAPSVQVAEAIAALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLIS  289 (382)
T ss_pred             CccceeeEEeehhhhhHHHHHHHhccCccchhhheecccCCCccchhHHHHhHhh
Confidence            55444444333332221            11233553  3778999999999887

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.96  E-value=1e-27  Score=224.86  Aligned_cols=250  Identities=17%  Similarity=0.193  Sum_probs=177.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi~   79 (305)
                      |+||||||+||||++|++.|.++|++|...                          .+|+.|.+.+.+.+.  ++|+|||
T Consensus       381 mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~--------------------------~~~l~d~~~v~~~i~~~~pd~Vih  434 (668)
T PLN02260        381 LKFLIYGRTGWIGGLLGKLCEKQGIAYEYG--------------------------KGRLEDRSSLLADIRNVKPTHVFN  434 (668)
T ss_pred             ceEEEECCCchHHHHHHHHHHhCCCeEEee--------------------------ccccccHHHHHHHHHhhCCCEEEE
Confidence            689999999999999999999999887311                          135667777777776  7899999


Q ss_pred             eccccccC---CCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCC--CCCcccCCCCCCCcccccc
Q 039049           80 TASPVLVP---YDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDA--QQVSPLNESHWSDPDYCKH  154 (305)
Q Consensus        80 ~a~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~--~~~~~~~E~~~~~~~~~~~  154 (305)
                      ||+.....   .+...+...+++|+.++.+|+++|++. +++ +|++||.++|++....  ....|++|++++.+..   
T Consensus       435 ~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~-g~~-~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~---  509 (668)
T PLN02260        435 AAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCREN-GLL-MMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTG---  509 (668)
T ss_pred             CCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHc-CCe-EEEEcccceecCCcccccccCCCCCcCCCCCCCC---
Confidence            99987532   234567778999999999999999998 885 6778888887643211  1124788887655421   


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCC-CCCCCCCccceeHHHHHHHH
Q 039049          155 YNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLR-GEYPNTTVGFVHIDDVVGAH  233 (305)
Q Consensus       155 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~D~a~~~  233 (305)
                        +.|+.||+++|.+++.+.     +..++|+..+||......    ..++..+++... +.++   .+..+++|++.++
T Consensus       510 --~~Yg~sK~~~E~~~~~~~-----~~~~~r~~~~~~~~~~~~----~nfv~~~~~~~~~~~vp---~~~~~~~~~~~~~  575 (668)
T PLN02260        510 --SFYSKTKAMVEELLREYD-----NVCTLRVRMPISSDLSNP----RNFITKISRYNKVVNIP---NSMTVLDELLPIS  575 (668)
T ss_pred             --ChhhHHHHHHHHHHHhhh-----hheEEEEEEecccCCCCc----cHHHHHHhccceeeccC---CCceehhhHHHHH
Confidence              679999999999997764     567888888887542211    124444444433 2233   4578889999998


Q ss_pred             HHhhcccccCceEEEe-cCCcCHHHHHHHHHHhCC-CC---CCCCCCCC--CCCCCCCcccchhHHHH-hCC
Q 039049          234 ILAMEETRASGRLICS-SSVAHWSPIIEMLKATYP-SY---PYESKCSK--QEGDNSPHSMDTSKLFE-LGF  297 (305)
Q Consensus       234 ~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~-~~---~~~~~~~~--~~~~~~~~~~~~~~~~~-lg~  297 (305)
                      +.+++. ..++.||++ ++.+|+.||++.+.+.++ ..   ++......  .......+.+|++|+++ +|+
T Consensus       576 ~~l~~~-~~~giyni~~~~~~s~~e~a~~i~~~~~~~~~~~~~~~~~~~~~~~a~rp~~~l~~~k~~~~~~~  646 (668)
T PLN02260        576 IEMAKR-NLRGIWNFTNPGVVSHNEILEMYKDYIDPGFKWSNFTLEEQAKVIVAPRSNNEMDASKLKKEFPE  646 (668)
T ss_pred             HHHHHh-CCCceEEecCCCcCcHHHHHHHHHHhcCCcccccccCHHHhhhHhhCCCccccccHHHHHHhCcc
Confidence            888874 346899996 568999999999999874 22   12111111  11112223899999999 776

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.2e-26  Score=193.83  Aligned_cols=232  Identities=20%  Similarity=0.191  Sum_probs=167.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |++|||||+|+||++++++|+++|++|+++.|+++....   +...  ...++.++++|+.|.+++.++++       ++
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~---~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   77 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDD---LKAR--YGDRLWVLQLDVTDSAAVRAVVDRAFAALGRI   77 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---HHHh--ccCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            679999999999999999999999999999998643222   1111  12368899999999988877654       57


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |+|||+||......    ..+.+...+++|+.++.++++++    ++. +.++||++||.......+             
T Consensus        78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~-------------  143 (276)
T PRK06482         78 DVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQ-GGGRIVQVSSEGGQIAYP-------------  143 (276)
T ss_pred             CEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEEcCcccccCCC-------------
Confidence            99999999875432    23345678889999999999997    444 678999999965432211             


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCce---ecCCCCCCC------CchHHHHHHHHhcCCC
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFV---VGPLLAPQP------TSTLLLILAMVKGLRG  214 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v---~G~~~~~~~------~~~~~~~~~~~~~~~~  214 (305)
                        +.      +.|+.+|++.|.+++.+..+   ++++++++||+.+   ||++.....      ......+........ 
T Consensus       144 --~~------~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  214 (276)
T PRK06482        144 --GF------SLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGS-  214 (276)
T ss_pred             --CC------chhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhcc-
Confidence              11      66999999999999888766   5999999999988   554432110      011111222222221 


Q ss_pred             CCCCCCccceeHHHHHHHHHHhhcccccCceEEEe-cCCcCHHHHHHHHHHhC
Q 039049          215 EYPNTTVGFVHIDDVVGAHILAMEETRASGRLICS-SSVAHWSPIIEMLKATY  266 (305)
Q Consensus       215 ~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~  266 (305)
                           ..-+.+++|++++++.+++.+..+..||++ ++..+..|+++.+.+.+
T Consensus       215 -----~~~~~d~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  262 (276)
T PRK06482        215 -----FAIPGDPQKMVQAMIASADQTPAPRRLTLGSDAYASIRAALSERLAAL  262 (276)
T ss_pred             -----CCCCCCHHHHHHHHHHHHcCCCCCeEEecChHHHHHHHHHHHHHHHHH
Confidence                 122468999999999999877666679986 56778888877776665

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.95  E-value=6.1e-26  Score=229.13  Aligned_cols=257  Identities=22%  Similarity=0.244  Sum_probs=180.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC----CeEEEEEeCCCcccchhhhhhc--------cCccCceEEEEccCCC------
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG----HMVRTTVRDPEDLSKVGFLWEL--------NGAEERLKIMKADLLM------   63 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g----~~V~~~~r~~~~~~~~~~~~~~--------~~~~~~~~~~~~D~~d------   63 (305)
                      ++|+|||||||+|+++++.|++++    ++|+++.|+.........+...        .....+++++.+|+.+      
T Consensus       972 ~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl~ 1051 (1389)
T TIGR03443       972 ITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGLS 1051 (1389)
T ss_pred             ceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCcC
Confidence            579999999999999999999887    7999999986543322222110        0112368999999974      


Q ss_pred             cchHHHHhcCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCC-------
Q 039049           64 EGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQ-------  136 (305)
Q Consensus        64 ~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~-------  136 (305)
                      .+.+.++..++|+|||+|+....   ..+...+...|+.++.+++++|.+. ++++|+|+||.++|+......       
T Consensus      1052 ~~~~~~l~~~~d~iiH~Aa~~~~---~~~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~vSS~~v~~~~~~~~~~~~~~~ 1127 (1389)
T TIGR03443      1052 DEKWSDLTNEVDVIIHNGALVHW---VYPYSKLRDANVIGTINVLNLCAEG-KAKQFSFVSSTSALDTEYYVNLSDELVQ 1127 (1389)
T ss_pred             HHHHHHHHhcCCEEEECCcEecC---ccCHHHHHHhHHHHHHHHHHHHHhC-CCceEEEEeCeeecCcccccchhhhhhh
Confidence            34566777799999999998763   3344556678999999999999988 889999999999886421100       


Q ss_pred             -CCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhc----
Q 039049          137 -QVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKG----  211 (305)
Q Consensus       137 -~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~----  211 (305)
                       ....+.|+.+..+.. ....+.|+.||+++|.++..+.+ .|++++++||++|||+....... ...++..+..+    
T Consensus      1128 ~~~~~~~e~~~~~~~~-~~~~~~Y~~sK~~aE~l~~~~~~-~g~~~~i~Rpg~v~G~~~~g~~~-~~~~~~~~~~~~~~~ 1204 (1389)
T TIGR03443      1128 AGGAGIPESDDLMGSS-KGLGTGYGQSKWVAEYIIREAGK-RGLRGCIVRPGYVTGDSKTGATN-TDDFLLRMLKGCIQL 1204 (1389)
T ss_pred             ccCCCCCccccccccc-ccCCCChHHHHHHHHHHHHHHHh-CCCCEEEECCCccccCCCcCCCC-chhHHHHHHHHHHHh
Confidence             012344443322211 11126799999999999988765 59999999999999996543221 11222222221    


Q ss_pred             CCCCCCCCCccceeHHHHHHHHHHhhccccc---CceEEEe-cCCcCHHHHHHHHHHh
Q 039049          212 LRGEYPNTTVGFVHIDDVVGAHILAMEETRA---SGRLICS-SSVAHWSPIIEMLKAT  265 (305)
Q Consensus       212 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~-~~~~s~~el~~~i~~~  265 (305)
                      .......+.++|++++|++++++.++.++..   ...||++ +..+++.++++.+.+.
T Consensus      1205 ~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~ 1262 (1389)
T TIGR03443      1205 GLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY 1262 (1389)
T ss_pred             CCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh
Confidence            2222233479999999999999999876532   2368886 4589999999999765

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.95  E-value=6.2e-27  Score=198.10  Aligned_cols=203  Identities=18%  Similarity=0.250  Sum_probs=150.1

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHh------cC-CC
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAI------QG-VD   75 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~------~~-~d   75 (305)
                      +|+||||||++|++++++|+++|++|++++|++++..           ..+++.+.+|+.|++.+.+++      ++ +|
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~-----------~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d   69 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA-----------GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEIS   69 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc-----------CCCCccccccCCCHHHHHHHHhcccCcCCcee
Confidence            5999999999999999999999999999999986432           125677889999999999998      56 99


Q ss_pred             EEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCccccccc
Q 039049           76 GVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHY  155 (305)
Q Consensus        76 ~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  155 (305)
                      .|+|+++...     +.        .....+++++|++. |++|||++||..+..+.                       
T Consensus        70 ~v~~~~~~~~-----~~--------~~~~~~~i~aa~~~-gv~~~V~~Ss~~~~~~~-----------------------  112 (285)
T TIGR03649        70 AVYLVAPPIP-----DL--------APPMIKFIDFARSK-GVRRFVLLSASIIEKGG-----------------------  112 (285)
T ss_pred             EEEEeCCCCC-----Ch--------hHHHHHHHHHHHHc-CCCEEEEeeccccCCCC-----------------------
Confidence            9999986532     11        23456899999999 99999999986542210                       


Q ss_pred             chhHHHHHHHHHHHHHHHHHH-cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCC--CCCCCccceeHHHHHHH
Q 039049          156 NLWYAYAKTIAEKEAWRIAKD-CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGE--YPNTTVGFVHIDDVVGA  232 (305)
Q Consensus       156 ~~~Y~~sK~~~E~~~~~~~~~-~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~v~D~a~~  232 (305)
                       .    .+...|.++    ++ .+++++++||+.++++......      ...+.....+.  .+++.++|++++|+|++
T Consensus       113 -~----~~~~~~~~l----~~~~gi~~tilRp~~f~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~  177 (285)
T TIGR03649       113 -P----AMGQVHAHL----DSLGGVEYTVLRPTWFMENFSEEFH------VEAIRKENKIYSATGDGKIPFVSADDIARV  177 (285)
T ss_pred             -c----hHHHHHHHH----HhccCCCEEEEeccHHhhhhccccc------ccccccCCeEEecCCCCccCcccHHHHHHH
Confidence             0    111234443    33 4899999999999876421110      11111222222  34558999999999999


Q ss_pred             HHHhhccccc-CceEEEe-cCCcCHHHHHHHHHHhCCC
Q 039049          233 HILAMEETRA-SGRLICS-SSVAHWSPIIEMLKATYPS  268 (305)
Q Consensus       233 ~~~~~~~~~~-~~~~~~~-~~~~s~~el~~~i~~~~~~  268 (305)
                      +..++..+.. ++.|+++ ++.+|+.|+++.+.+.+|+
T Consensus       178 ~~~~l~~~~~~~~~~~l~g~~~~s~~eia~~l~~~~g~  215 (285)
T TIGR03649       178 AYRALTDKVAPNTDYVVLGPELLTYDDVAEILSRVLGR  215 (285)
T ss_pred             HHHHhcCCCcCCCeEEeeCCccCCHHHHHHHHHHHhCC
Confidence            9999987654 4578885 5799999999999999975

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.94  E-value=1.8e-25  Score=176.78  Aligned_cols=183  Identities=30%  Similarity=0.421  Sum_probs=141.9

Q ss_pred             EEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEeccc
Q 039049            4 YCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTASP   83 (305)
Q Consensus         4 ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a~~   83 (305)
                      |+|+||||++|++++++|+++|++|++++|++++...          ..+++++++|+.|++.+.+++.++|+||++++.
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~----------~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~   70 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED----------SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGP   70 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH----------CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHS
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc----------ccccccceeeehhhhhhhhhhhhcchhhhhhhh
Confidence            7999999999999999999999999999999874432          338999999999999999999999999999976


Q ss_pred             cccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHHHHH
Q 039049           84 VLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAK  163 (305)
Q Consensus        84 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK  163 (305)
                      ...             ....+.++++++++. ++++||++||.+++.....     ....  ...+.+     ..|...|
T Consensus        71 ~~~-------------~~~~~~~~~~a~~~~-~~~~~v~~s~~~~~~~~~~-----~~~~--~~~~~~-----~~~~~~~  124 (183)
T PF13460_consen   71 PPK-------------DVDAAKNIIEAAKKA-GVKRVVYLSSAGVYRDPPG-----LFSD--EDKPIF-----PEYARDK  124 (183)
T ss_dssp             TTT-------------HHHHHHHHHHHHHHT-TSSEEEEEEETTGTTTCTS-----EEEG--GTCGGG-----HHHHHHH
T ss_pred             hcc-------------ccccccccccccccc-ccccceeeeccccCCCCCc-----cccc--ccccch-----hhhHHHH
Confidence            441             167788999999999 9999999999987654321     1111  111110     4588999


Q ss_pred             HHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhcc
Q 039049          164 TIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEE  239 (305)
Q Consensus       164 ~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  239 (305)
                      ..+|+.++    +.+++++++||+.+||+..... .....            .+....++|+.+|+|++++.++++
T Consensus       125 ~~~e~~~~----~~~~~~~ivrp~~~~~~~~~~~-~~~~~------------~~~~~~~~i~~~DvA~~~~~~l~~  183 (183)
T PF13460_consen  125 REAEEALR----ESGLNWTIVRPGWIYGNPSRSY-RLIKE------------GGPQGVNFISREDVAKAIVEALEN  183 (183)
T ss_dssp             HHHHHHHH----HSTSEEEEEEESEEEBTTSSSE-EEESS------------TSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred             HHHHHHHH----hcCCCEEEEECcEeEeCCCcce-eEEec------------cCCCCcCcCCHHHHHHHHHHHhCC
Confidence            99998873    4599999999999999974311 11000            122266899999999999999864

...

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.94  E-value=8.7e-25  Score=181.42  Aligned_cols=226  Identities=23%  Similarity=0.210  Sum_probs=158.2

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCC-cchHHHHh-cCCCEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLM-EGSFDEAI-QGVDGVF   78 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~-~~~d~Vi   78 (305)
                      ||+|+||||+|+||+++++.|+++|++|+++.|++++....     .+ ...+++++++|+.| .+.+.+.+ .++|+||
T Consensus        17 ~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-----~~-~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi   90 (251)
T PLN00141         17 TKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTS-----LP-QDPSLQIVRADVTEGSDKLVEAIGDDSDAVI   90 (251)
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHh-----cc-cCCceEEEEeeCCCCHHHHHHHhhcCCCEEE
Confidence            68999999999999999999999999999999987542211     11 12368999999998 46677777 6899999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchh
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLW  158 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  158 (305)
                      |+++....   .+ ....+++|..++.++++++++. ++++||++||.++|+....    .+..+...  +.   .....
T Consensus        91 ~~~g~~~~---~~-~~~~~~~n~~~~~~ll~a~~~~-~~~~iV~iSS~~v~g~~~~----~~~~~~~~--~~---~~~~~  156 (251)
T PLN00141         91 CATGFRRS---FD-PFAPWKVDNFGTVNLVEACRKA-GVTRFILVSSILVNGAAMG----QILNPAYI--FL---NLFGL  156 (251)
T ss_pred             ECCCCCcC---CC-CCCceeeehHHHHHHHHHHHHc-CCCEEEEEccccccCCCcc----cccCcchh--HH---HHHHH
Confidence            99886431   11 2234678999999999999988 8899999999988764211    11111100  00   00023


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCC-CccceeHHHHHHHHHHhh
Q 039049          159 YAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNT-TVGFVHIDDVVGAHILAM  237 (305)
Q Consensus       159 Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~D~a~~~~~~~  237 (305)
                      |..+|..+|++++    +.+++++++||+.+++......  ..            ....+. ...+|+.+|+|+++..++
T Consensus       157 ~~~~k~~~e~~l~----~~gi~~~iirpg~~~~~~~~~~--~~------------~~~~~~~~~~~i~~~dvA~~~~~~~  218 (251)
T PLN00141        157 TLVAKLQAEKYIR----KSGINYTIVRPGGLTNDPPTGN--IV------------MEPEDTLYEGSISRDQVAEVAVEAL  218 (251)
T ss_pred             HHHHHHHHHHHHH----hcCCcEEEEECCCccCCCCCce--EE------------ECCCCccccCcccHHHHHHHHHHHh
Confidence            4567888887764    4589999999999998642110  00            000111 235799999999999999


Q ss_pred             ccccc-CceEEEe----cCCcCHHHHHHHHHH
Q 039049          238 EETRA-SGRLICS----SSVAHWSPIIEMLKA  264 (305)
Q Consensus       238 ~~~~~-~~~~~~~----~~~~s~~el~~~i~~  264 (305)
                      ..+.. ...+.+.    +...++.+|+..+++
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (251)
T PLN00141        219 LCPESSYKVVEIVARADAPKRSYKDLFASIKQ  250 (251)
T ss_pred             cChhhcCcEEEEecCCCCCchhHHHHHHHhhc
Confidence            88765 4456553    235899999988764

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.93  E-value=1.1e-24  Score=182.21  Aligned_cols=221  Identities=20%  Similarity=0.160  Sum_probs=155.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      +++|||||+|+||+++++.|++.|++|+++.|+++.......  .......++.++++|+.|.+.+.++++       ++
T Consensus         8 ~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   85 (262)
T PRK13394          8 KTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVAD--EINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV   85 (262)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH--HHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            679999999999999999999999999999998754332211  111223467889999999988877665       48


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHH----HHHHHHHH-HhcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKG----TLNVLSSC-KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~----~~~l~~~~-~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      |+|||||+......    ..+.+...+++|+.+    +.++++.+ +.. +.++||++||.....+.+.           
T Consensus        86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~~~~iv~~ss~~~~~~~~~-----------  153 (262)
T PRK13394         86 DILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDD-RGGVVIYMGSVHSHEASPL-----------  153 (262)
T ss_pred             CEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhc-CCcEEEEEcchhhcCCCCC-----------
Confidence            99999999865432    234456778899999    66666666 555 7789999999754332111           


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCc--------hHHHHHHHHhcCCC
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTS--------TLLLILAMVKGLRG  214 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~--------~~~~~~~~~~~~~~  214 (305)
                          .      ..|+.+|...+.+++.++++   .+++++++||+.++++........        ....+.....+   
T Consensus       154 ----~------~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  220 (262)
T PRK13394        154 ----K------SAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLG---  220 (262)
T ss_pred             ----C------cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhc---
Confidence                1      55999999999998888766   489999999999999863221100        00111111111   


Q ss_pred             CCCCCCccceeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          215 EYPNTTVGFVHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       215 ~~~~~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                        +...++|++++|++++++.+++....   +..|+++++
T Consensus       221 --~~~~~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~g  258 (262)
T PRK13394        221 --KTVDGVFTTVEDVAQTVLFLSSFPSAALTGQSFVVSHG  258 (262)
T ss_pred             --CCCCCCCCCHHHHHHHHHHHcCccccCCcCCEEeeCCc
Confidence              11257899999999999999986533   345777543

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.93  E-value=4.3e-24  Score=177.11  Aligned_cols=218  Identities=16%  Similarity=0.118  Sum_probs=158.0

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      ||+|+||||+|+||++|+++|+++|++|+++.|+....... ..........++.++.+|+.|.+.+.++++       +
T Consensus         6 ~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   84 (249)
T PRK12825          6 GRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEE-LVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGR   84 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHH-HHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999998888775432211 111111123468899999999998887764       5


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|+|||+|+......    ..+.+...+++|+.++.++++.+    ++. +.++||++||...+++....          
T Consensus        85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~i~~SS~~~~~~~~~~----------  153 (249)
T PRK12825         85 IDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQ-RGGRIVNISSVAGLPGWPGR----------  153 (249)
T ss_pred             CCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEECccccCCCCCCc----------
Confidence            799999999765432    33455678899999999999887    344 67899999998766432111          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                                 ..|+.+|.+.+.+++.++++   .+++++++||+.++|+.......  ......   ....    ....
T Consensus       154 -----------~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~--~~~~~~---~~~~----~~~~  213 (249)
T PRK12825        154 -----------SNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIE--EAREAK---DAET----PLGR  213 (249)
T ss_pred             -----------hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccc--hhHHhh---hccC----CCCC
Confidence                       56999999999998877665   58999999999999987543211  111111   0011    1334


Q ss_pred             ceeHHHHHHHHHHhhcccc---cCceEEEec
Q 039049          223 FVHIDDVVGAHILAMEETR---ASGRLICSS  250 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~---~~~~~~~~~  250 (305)
                      +++++|+++++.+++++..   .+..|++++
T Consensus       214 ~~~~~dva~~~~~~~~~~~~~~~g~~~~i~~  244 (249)
T PRK12825        214 SGTPEDIARAVAFLCSDASDYITGQVIEVTG  244 (249)
T ss_pred             CcCHHHHHHHHHHHhCccccCcCCCEEEeCC
Confidence            8999999999999997653   245688864

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.93  E-value=4.2e-24  Score=177.89  Aligned_cols=222  Identities=18%  Similarity=0.158  Sum_probs=155.3

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHh-------cC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAI-------QG   73 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-------~~   73 (305)
                      |+++|||||+|+||+++++.|+++|++|++++|+.+.........  .....++.++++|+.|.+++.+++       .+
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVA--TDAGGSVIYLVADVTKEDEIADMIAAAAAEFGG   78 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--HhcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            678999999999999999999999999999999865433222111  111236889999999998665544       36


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|+|||+|+......    ..+.....++.|+.++..+++.+    ++. ++++||++||...+.+.+..          
T Consensus        79 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~~v~~ss~~~~~~~~~~----------  147 (255)
T TIGR01963        79 LDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQ-GWGRIINIASAHGLVASPFK----------  147 (255)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEEcchhhcCCCCCC----------
Confidence            799999999765422    22334567789999988888776    445 67899999997655432211          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCC--------chHHHHHHHHhcCCC
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPT--------STLLLILAMVKGLRG  214 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~--------~~~~~~~~~~~~~~~  214 (305)
                                 ..|+.+|.+.+.+++.++.+   .+++++++||+.++++.......        .....+.....    
T Consensus       148 -----------~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  212 (255)
T TIGR01963       148 -----------SAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVML----  212 (255)
T ss_pred             -----------chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHH----
Confidence                       55999999999998877655   38999999999999885211000        00000000010    


Q ss_pred             CCCCCCccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          215 EYPNTTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       215 ~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                       .+...+++++++|+|++++.+++...   .+..|+++++
T Consensus       213 -~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~g  251 (255)
T TIGR01963       213 -PGQPTKRFVTVDEVAETALFLASDAAAGITGQAIVLDGG  251 (255)
T ss_pred             -ccCccccCcCHHHHHHHHHHHcCccccCccceEEEEcCc
Confidence             12235789999999999999998643   2445888643

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.93  E-value=5.4e-24  Score=179.17  Aligned_cols=232  Identities=17%  Similarity=0.133  Sum_probs=168.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++|+||||+|+||++++++|+++|++|++++|++++.....   ..  ....+.++++|+.|.+++.++++       ++
T Consensus         4 k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~---~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (275)
T PRK08263          4 KVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLA---EK--YGDRLLPLALDVTDRAAVFAAVETAVEHFGRL   78 (275)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHH---Hh--ccCCeeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999865432211   11  12357888999999888777654       57


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |+||||||......    ..+.+...+++|+.++.++++.+    ++. +.+++|++||...+.+.+..           
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~vsS~~~~~~~~~~-----------  146 (275)
T PRK08263         79 DIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQ-RSGHIIQISSIGGISAFPMS-----------  146 (275)
T ss_pred             CEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEEcChhhcCCCCCc-----------
Confidence            99999999875432    34567778999999998888775    444 66799999998765543211           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCC---c--hHHHH-HHHHhcCCCCCC
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPT---S--TLLLI-LAMVKGLRGEYP  217 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~---~--~~~~~-~~~~~~~~~~~~  217 (305)
                                ..|+.+|...+.+.+.++.+   +|++++++||+.+..+.......   .  ....+ ........    
T Consensus       147 ----------~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  212 (275)
T PRK08263        147 ----------GIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWS----  212 (275)
T ss_pred             ----------cHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHH----
Confidence                      56999999999988887765   68999999999988765421110   0  00111 11111111    


Q ss_pred             CCCccc-eeHHHHHHHHHHhhcccccCceEEE-ec-CCcCHHHHHHHHHHhC
Q 039049          218 NTTVGF-VHIDDVVGAHILAMEETRASGRLIC-SS-SVAHWSPIIEMLKATY  266 (305)
Q Consensus       218 ~~~~~~-i~v~D~a~~~~~~~~~~~~~~~~~~-~~-~~~s~~el~~~i~~~~  266 (305)
                        ...+ ++++|++++++.+++.+.....|++ ++ ..+++.++.+.+.+..
T Consensus       213 --~~~~~~~p~dva~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (275)
T PRK08263        213 --ERSVDGDPEAAAEALLKLVDAENPPLRLFLGSGVLDLAKADYERRLATWE  262 (275)
T ss_pred             --hccCCCCHHHHHHHHHHHHcCCCCCeEEEeCchHHHHHHHHHHHHHHHHH
Confidence              3345 8999999999999998776666655 33 5789999999988753

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.93  E-value=5.4e-24  Score=177.48  Aligned_cols=230  Identities=19%  Similarity=0.114  Sum_probs=164.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|+||+++++.|+++|++|++++|++.+......  ..  ...+++++++|+.|.+.+.++++       ++
T Consensus         3 k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~--~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (257)
T PRK07074          3 RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFAD--AL--GDARFVPVACDLTDAASLAAALANAAAERGPV   78 (257)
T ss_pred             CEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--Hh--cCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            679999999999999999999999999999998654322211  11  12368899999999998877665       47


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |+|||+++......    ..+.+...+++|+.++.++++++.    +. +.++||++||....... .            
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~sS~~~~~~~-~------------  144 (257)
T PRK07074         79 DVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKR-SRGAVVNIGSVNGMAAL-G------------  144 (257)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEEcchhhcCCC-C------------
Confidence            99999999765322    223344557799999999888873    33 55789999996432111 0            


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                       .        ..|+.+|.+.+.+++.++.++   +++++++||+.++++...........+........      ...+|
T Consensus       145 -~--------~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~~  209 (257)
T PRK07074        145 -H--------PAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWY------PLQDF  209 (257)
T ss_pred             -C--------cccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcC------CCCCC
Confidence             0        349999999999999988664   79999999999998864322111222222222211      14689


Q ss_pred             eeHHHHHHHHHHhhccccc---CceEEEe-cCCcCHHHHHHHHHH
Q 039049          224 VHIDDVVGAHILAMEETRA---SGRLICS-SSVAHWSPIIEMLKA  264 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~~---~~~~~~~-~~~~s~~el~~~i~~  264 (305)
                      ++++|++++++++++....   +..+++. +...+.+|+++.+.+
T Consensus       210 ~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~  254 (257)
T PRK07074        210 ATPDDVANAVLFLASPAARAITGVCLPVDGGLTAGNREMARTLTL  254 (257)
T ss_pred             CCHHHHHHHHHHHcCchhcCcCCcEEEeCCCcCcCChhhhhhhcc
Confidence            9999999999999975322   3446675 567889999988764

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.93  E-value=7.1e-24  Score=176.09  Aligned_cols=219  Identities=17%  Similarity=0.124  Sum_probs=158.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+|+||||+|+||+++++.|+++|++|++++|+..+.....  ........++.++.+|+.|.+.+.++++       ++
T Consensus         7 ~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~--~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   84 (251)
T PRK12826          7 RVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATA--ELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL   84 (251)
T ss_pred             CEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            67999999999999999999999999999999865332211  1112223468899999999998888775       68


Q ss_pred             CEEEEeccccccC----CCCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceee-eccCCCCCCcccCCCC
Q 039049           75 DGVFHTASPVLVP----YDNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSI-RYRHDAQQVSPLNESH  145 (305)
Q Consensus        75 d~Vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~-~~~~~~~~~~~~~E~~  145 (305)
                      |+|||+++.....    ...+.+...++.|+.++.++++.+.    +. +.++||++||...+ .+..            
T Consensus        85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~~ss~~~~~~~~~------------  151 (251)
T PRK12826         85 DILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRA-GGGRIVLTSSVAGPRVGYP------------  151 (251)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEEechHhhccCCC------------
Confidence            9999999887652    2344567789999999999998874    34 56799999997654 1110            


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                         ..      ..|+.+|..++.+++.+..+   .+++++++||+.++|+........  .+........+      ...
T Consensus       152 ---~~------~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~--~~~~~~~~~~~------~~~  214 (251)
T PRK12826        152 ---GL------AHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDA--QWAEAIAAAIP------LGR  214 (251)
T ss_pred             ---Cc------cHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCch--HHHHHHHhcCC------CCC
Confidence               01      56999999999999887655   489999999999999864332211  11111212211      235


Q ss_pred             ceeHHHHHHHHHHhhcccc---cCceEEEecCC
Q 039049          223 FVHIDDVVGAHILAMEETR---ASGRLICSSSV  252 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~~  252 (305)
                      +++++|++.++..++....   .+..|++.++.
T Consensus       215 ~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~  247 (251)
T PRK12826        215 LGEPEDIAAAVLFLASDEARYITGQTLPVDGGA  247 (251)
T ss_pred             CcCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence            8999999999999887643   34567876543

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.2e-23  Score=176.98  Aligned_cols=222  Identities=13%  Similarity=0.071  Sum_probs=154.9

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      +++++||||+|+||+++++.|+++|++|+++.|+.....+..  ........++.++++|+.+.+++.++++       +
T Consensus        10 ~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   87 (274)
T PRK07775         10 RRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELV--DKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE   87 (274)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            357999999999999999999999999999998764322211  1111123367888999999998887665       5


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      +|+|||+||......    ..+.+...+++|+.++.++++.+...   .+..+||++||...+.+.+.            
T Consensus        88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~------------  155 (274)
T PRK07775         88 IEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPH------------  155 (274)
T ss_pred             CCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCC------------
Confidence            799999999765432    22345567899999999999886421   14568999999765543211            


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCC-CCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAP-QPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                         .      ..|+.+|.+.|.+++.+..+.   +++++++||+.+.++.... .......++.......    ......
T Consensus       156 ---~------~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~----~~~~~~  222 (274)
T PRK07775        156 ---M------GAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWG----QARHDY  222 (274)
T ss_pred             ---c------chHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhc----cccccc
Confidence               1      569999999999999887664   8999999999876553211 1111111111111100    111466


Q ss_pred             ceeHHHHHHHHHHhhcccccCceEEEe
Q 039049          223 FVHIDDVVGAHILAMEETRASGRLICS  249 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~~~~~~~~~  249 (305)
                      +++++|+|++++.+++++.....||+.
T Consensus       223 ~~~~~dva~a~~~~~~~~~~~~~~~~~  249 (274)
T PRK07775        223 FLRASDLARAITFVAETPRGAHVVNME  249 (274)
T ss_pred             ccCHHHHHHHHHHHhcCCCCCCeeEEe
Confidence            999999999999999876544567773

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.92  E-value=1.1e-23  Score=175.69  Aligned_cols=221  Identities=16%  Similarity=0.138  Sum_probs=155.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++|+||||+|+||++++++|+++|++|++++|++.+......  .......++.++.+|+.|++++.++++       ++
T Consensus         5 ~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   82 (258)
T PRK12429          5 KVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAE--ALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV   82 (258)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH--HHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            679999999999999999999999999999998764433211  111123478899999999998877765       58


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |+|||+|+......    +.+.....+++|+.++.++++.+    ++. +.++||++||...+.+....           
T Consensus        83 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~iss~~~~~~~~~~-----------  150 (258)
T PRK12429         83 DILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQ-GGGRIINMASVHGLVGSAGK-----------  150 (258)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc-CCeEEEEEcchhhccCCCCc-----------
Confidence            99999999765432    23345567788999855555544    455 67899999998765443211           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCc--------hHHHHHHHHhcCCCC
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTS--------TLLLILAMVKGLRGE  215 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~--------~~~~~~~~~~~~~~~  215 (305)
                                +.|+.+|.+.+.+.+.++.+   .+++++++||+.++++........        ...........    
T Consensus       151 ----------~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  216 (258)
T PRK12429        151 ----------AAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLP----  216 (258)
T ss_pred             ----------chhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhc----
Confidence                      66999999999988887665   379999999999999864321100        00000111111    


Q ss_pred             CCCCCccceeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          216 YPNTTVGFVHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       216 ~~~~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                       ....+.|++++|+|+++..++.....   +..|+++++
T Consensus       217 -~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g  254 (258)
T PRK12429        217 -LVPQKRFTTVEEIADYALFLASFAAKGVTGQAWVVDGG  254 (258)
T ss_pred             -cCCccccCCHHHHHHHHHHHcCccccCccCCeEEeCCC
Confidence             11246799999999999999876433   345777654

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.7e-23  Score=176.28  Aligned_cols=219  Identities=16%  Similarity=0.094  Sum_probs=154.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++|+||||+|+||+++++.|+++|++|++++|++++...   +...  ...++..+++|+.|.+.+.++++       ++
T Consensus         5 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~---l~~~--~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~   79 (277)
T PRK06180          5 KTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARAD---FEAL--HPDRALARLLDVTDFDAIDAVVADAEATFGPI   79 (277)
T ss_pred             CEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHH---HHhh--cCCCeeEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            579999999999999999999999999999998653322   1111  12367889999999988877765       57


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |+|||+||......    ..+.....+++|+.++.++++++.    +. +.++||++||...+.+.+.            
T Consensus        80 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~iSS~~~~~~~~~------------  146 (277)
T PRK06180         80 DVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRAR-RRGHIVNITSMGGLITMPG------------  146 (277)
T ss_pred             CEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc-CCCEEEEEecccccCCCCC------------
Confidence            99999999865432    223455678999999999999853    33 5579999999775543211            


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCC----chHH---HHHHHHhcCCCCC
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPT----STLL---LILAMVKGLRGEY  216 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~----~~~~---~~~~~~~~~~~~~  216 (305)
                         .      ..|+.+|...|.+++.++.+   ++++++++||+.+.++.......    ....   ..........   
T Consensus       147 ---~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  214 (277)
T PRK06180        147 ---I------GYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQARE---  214 (277)
T ss_pred             ---c------chhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHH---
Confidence               1      66999999999998887755   48999999999998865322111    0110   0111100000   


Q ss_pred             CCCCccceeHHHHHHHHHHhhcccccCceEEEec
Q 039049          217 PNTTVGFVHIDDVVGAHILAMEETRASGRLICSS  250 (305)
Q Consensus       217 ~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~  250 (305)
                      ......+..++|+|++++.+++.+.....|.++.
T Consensus       215 ~~~~~~~~~~~dva~~~~~~l~~~~~~~~~~~g~  248 (277)
T PRK06180        215 AKSGKQPGDPAKAAQAILAAVESDEPPLHLLLGS  248 (277)
T ss_pred             hhccCCCCCHHHHHHHHHHHHcCCCCCeeEeccH
Confidence            0012346789999999999999876655555543

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2.4e-24  Score=181.86  Aligned_cols=227  Identities=16%  Similarity=0.099  Sum_probs=158.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHh-------cCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAI-------QGV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-------~~~   74 (305)
                      ++++||||+|+||+++++.|+++|++|++++|+++................+++++.+|+.|++++.+ +       .++
T Consensus         4 k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~i   82 (280)
T PRK06914          4 KIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGRI   82 (280)
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCCe
Confidence            45999999999999999999999999999999876443332211111112468999999999887765 3       257


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |+|||||+......    ..+.....+++|+.++.++++.+    ++. +.++||++||.....+....           
T Consensus        83 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~vsS~~~~~~~~~~-----------  150 (280)
T PRK06914         83 DLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQ-KSGKIINISSISGRVGFPGL-----------  150 (280)
T ss_pred             eEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEECcccccCCCCCC-----------
Confidence            99999999766432    23455667889999999888885    444 66799999997654332111           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHH---HHcCCcEEEEecCceecCCCCCCCC----------chHHHHHHHHhcCC
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIA---KDCGIDMVVVNPSFVVGPLLAPQPT----------STLLLILAMVKGLR  213 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~~~~~i~Rp~~v~G~~~~~~~~----------~~~~~~~~~~~~~~  213 (305)
                                ..|+.+|...+.+++.++   ..++++++++||+.++++.......          .....+......  
T Consensus       151 ----------~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  218 (280)
T PRK06914        151 ----------SPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKH--  218 (280)
T ss_pred             ----------chhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHH--
Confidence                      569999999999988876   3458999999999998874321110          001111111100  


Q ss_pred             CCCCCCCccceeHHHHHHHHHHhhcccccCceEEEe-cCCcCH
Q 039049          214 GEYPNTTVGFVHIDDVVGAHILAMEETRASGRLICS-SSVAHW  255 (305)
Q Consensus       214 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~  255 (305)
                        .......+++++|+|++++.+++++.....|+++ +..+++
T Consensus       219 --~~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (280)
T PRK06914        219 --INSGSDTFGNPIDVANLIVEIAESKRPKLRYPIGKGVKLMI  259 (280)
T ss_pred             --HhhhhhccCCHHHHHHHHHHHHcCCCCCcccccCCchHHHH
Confidence              0111345789999999999999987776667875 444443

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.92  E-value=1e-24  Score=169.81  Aligned_cols=290  Identities=18%  Similarity=0.116  Sum_probs=205.6

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccc--hhhhhhcc--CccCceEEEEccCCCcchHHHHhc--CCCE
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSK--VGFLWELN--GAEERLKIMKADLLMEGSFDEAIQ--GVDG   76 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~--~~~~~~~~--~~~~~~~~~~~D~~d~~~~~~~~~--~~d~   76 (305)
                      -.||||-||.=|+.|++.|+++||+|.++.|..+.-..  ..++...|  +...+.....+|++|...+.+++.  +++-
T Consensus        30 vALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikPtE  109 (376)
T KOG1372|consen   30 VALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKPTE  109 (376)
T ss_pred             EEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCchh
Confidence            47999999999999999999999999999997654322  22233322  234567888999999999999987  6799


Q ss_pred             EEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcC--CccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccc
Q 039049           77 VFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAK--SVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKH  154 (305)
Q Consensus        77 Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  154 (305)
                      |+|+|+..+..-+.+-++-.-++...|+++|+++.+...  ..-||--.||+.-||...    +.|..|.+|-.|-    
T Consensus       110 iYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~----e~PQsE~TPFyPR----  181 (376)
T KOG1372|consen  110 VYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQ----EIPQSETTPFYPR----  181 (376)
T ss_pred             hhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhccccc----CCCcccCCCCCCC----
Confidence            999999988877777777788899999999999988762  112788888877666543    2688899988877    


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHH----HHHHhcCC--CCCCCC--CccceeH
Q 039049          155 YNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLI----LAMVKGLR--GEYPNT--TVGFVHI  226 (305)
Q Consensus       155 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~----~~~~~~~~--~~~~~~--~~~~i~v  226 (305)
                        ++|+.+|..+-=.+--|.+.+++-.|.=-+.+--.|....  .+....+    .++..|..  +.+|+-  .|||-|.
T Consensus       182 --SPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGe--nFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA  257 (376)
T KOG1372|consen  182 --SPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGE--NFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHA  257 (376)
T ss_pred             --ChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCcccc--chhhHHHHHHHHHhhhcceeeEEecchhhhcccchh
Confidence              8899999877655444545555443332222222232211  1222222    22222322  234443  8999999


Q ss_pred             HHHHHHHHHhhcccccCceEEEecCCcCHHHHHHHHHHhCCCC-CCC----CC-------------CC--CCCCCCCCcc
Q 039049          227 DDVVGAHILAMEETRASGRLICSSSVAHWSPIIEMLKATYPSY-PYE----SK-------------CS--KQEGDNSPHS  286 (305)
Q Consensus       227 ~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~~~~-~~~----~~-------------~~--~~~~~~~~~~  286 (305)
                      .|.+.+++..++++.+......+++..|++||++.....+|.. ...    ..             .+  -++......+
T Consensus       258 ~dYVEAMW~mLQ~d~PdDfViATge~hsVrEF~~~aF~~ig~~l~Weg~gv~~~~~n~~g~v~V~v~~kYyRPtEVd~Lq  337 (376)
T KOG1372|consen  258 GDYVEAMWLMLQQDSPDDFVIATGEQHSVREFCNLAFAEIGEVLNWEGEGVDEVGKNDDGVVRVKVDPKYYRPTEVDTLQ  337 (376)
T ss_pred             HHHHHHHHHHHhcCCCCceEEecCCcccHHHHHHHHHHhhCcEEeecccccccccccCCceEEEEecccccCcchhhhhc
Confidence            9999999999998766555555799999999999998887631 000    00             00  1455566788


Q ss_pred             cchhHHHH-hCCCccc-cCCC
Q 039049          287 MDTSKLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       287 ~~~~~~~~-lg~~~~~-~l~e  305 (305)
                      .|.+|+++ ||| +|+ +++|
T Consensus       338 GdasKAk~~LgW-~pkv~f~e  357 (376)
T KOG1372|consen  338 GDASKAKKTLGW-KPKVTFPE  357 (376)
T ss_pred             CChHHHHHhhCC-CCccCHHH
Confidence            99999999 999 998 7653

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.6e-23  Score=176.45  Aligned_cols=236  Identities=18%  Similarity=0.193  Sum_probs=165.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchh-hhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVG-FLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      ++++||||+|+||+++++.|+++|++|+++.|+++...... .+... ....++.++++|+.|++++.++++       +
T Consensus         8 k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   86 (276)
T PRK05875          8 RTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEAL-KGAGAVRYEPADVTDEDQVARAVDAATAWHGR   86 (276)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc-cCCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            78999999999999999999999999999999865332211 11111 112367889999999988887765       6


Q ss_pred             CCEEEEeccccccC-----CCCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVP-----YDNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|+|||+|+.....     ...+.+...+++|+.++.++++++.+.   .+..+||++||...+.+.+.           
T Consensus        87 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-----------  155 (276)
T PRK05875         87 LHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRW-----------  155 (276)
T ss_pred             CCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCC-----------
Confidence            79999999965321     123345678899999999999876543   13458999999875432111           


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                          .      +.|+.+|.+.|.+++.+..+.   +++++++||+.+.++........ ...........+      ...
T Consensus       156 ----~------~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~------~~~  218 (276)
T PRK05875        156 ----F------GAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITES-PELSADYRACTP------LPR  218 (276)
T ss_pred             ----C------cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccC-HHHHHHHHcCCC------CCC
Confidence                1      569999999999999887665   69999999999987654321111 111112221111      344


Q ss_pred             ceeHHHHHHHHHHhhccccc---CceEEEe-cCCc----CHHHHHHHHHHhC
Q 039049          223 FVHIDDVVGAHILAMEETRA---SGRLICS-SSVA----HWSPIIEMLKATY  266 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~~---~~~~~~~-~~~~----s~~el~~~i~~~~  266 (305)
                      +++++|+|+++.++++.+..   +..++++ +..+    +..|+++.+.+..
T Consensus       219 ~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~  270 (276)
T PRK05875        219 VGEVEDVANLAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGAD  270 (276)
T ss_pred             CcCHHHHHHHHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHH
Confidence            78899999999999987653   4568885 4444    7777777776554

>PRK09135 pteridine reductase; Provisional

Probab=99.92  E-value=3.2e-23  Score=171.96  Aligned_cols=218  Identities=16%  Similarity=0.109  Sum_probs=149.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcc-cchh-hhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDL-SKVG-FLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      ++|+||||+|+||++++++|+++|++|+++.|+..+. .... .+...  ....+.++++|+.|.+.+.++++       
T Consensus         7 ~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (249)
T PRK09135          7 KVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNAL--RPGSAAALQADLLDPDALPELVAACVAAFG   84 (249)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhh--cCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5799999999999999999999999999999875321 1111 11111  12357889999999998887775       


Q ss_pred             CCCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           73 GVDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA--KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      ++|+|||+||......    ..+.+...+++|+.++.++++++...  .....++++++...               ..+
T Consensus        85 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~---------------~~~  149 (249)
T PRK09135         85 RLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHA---------------ERP  149 (249)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhh---------------cCC
Confidence            4799999999754322    23456778999999999999998642  12235666554321               112


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccce
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC--GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFV  224 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  224 (305)
                      ..+.      ..|+.+|..+|.+++.+..+.  +++++++||+.++|+......  ..........+.+      ...+.
T Consensus       150 ~~~~------~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~--~~~~~~~~~~~~~------~~~~~  215 (249)
T PRK09135        150 LKGY------PVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSF--DEEARQAILARTP------LKRIG  215 (249)
T ss_pred             CCCc------hhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccC--CHHHHHHHHhcCC------cCCCc
Confidence            2222      679999999999999988775  699999999999999754321  1112222222222      12234


Q ss_pred             eHHHHHHHHHHhhcccc--cCceEEEec
Q 039049          225 HIDDVVGAHILAMEETR--ASGRLICSS  250 (305)
Q Consensus       225 ~v~D~a~~~~~~~~~~~--~~~~~~~~~  250 (305)
                      +++|+|+++.+++....  .+..||+++
T Consensus       216 ~~~d~a~~~~~~~~~~~~~~g~~~~i~~  243 (249)
T PRK09135        216 TPEDIAEAVRFLLADASFITGQILAVDG  243 (249)
T ss_pred             CHHHHHHHHHHHcCccccccCcEEEECC
Confidence            68999999977765422  355689864

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.91  E-value=9.4e-24  Score=167.81  Aligned_cols=224  Identities=18%  Similarity=0.148  Sum_probs=172.1

Q ss_pred             EEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEeccc
Q 039049            4 YCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTASP   83 (305)
Q Consensus         4 ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a~~   83 (305)
                      +.|+|||||+|+.++++|.+.|-+|++.-|..+...  .++ +.-+..+.+-+...|+.|+++++++.+...+|||+.|.
T Consensus        64 aTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~--r~l-kvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINLIGr  140 (391)
T KOG2865|consen   64 ATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDP--RHL-KVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINLIGR  140 (391)
T ss_pred             EEEecccccccHHHHHHHhhcCCeEEEeccCCccch--hhe-eecccccceeeeccCCCCHHHHHHHHHhCcEEEEeecc
Confidence            578999999999999999999999999999755321  121 12234557889999999999999999999999999987


Q ss_pred             cccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHHHHH
Q 039049           84 VLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAK  163 (305)
Q Consensus        84 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK  163 (305)
                      -.    +...-.+.++|+.+++++...|++. |+.||||+|+..+--.  .                     .+-|-.+|
T Consensus       141 d~----eTknf~f~Dvn~~~aerlAricke~-GVerfIhvS~Lganv~--s---------------------~Sr~LrsK  192 (391)
T KOG2865|consen  141 DY----ETKNFSFEDVNVHIAERLARICKEA-GVERFIHVSCLGANVK--S---------------------PSRMLRSK  192 (391)
T ss_pred             cc----ccCCcccccccchHHHHHHHHHHhh-Chhheeehhhcccccc--C---------------------hHHHHHhh
Confidence            54    2333448899999999999999999 9999999998663110  0                     05699999


Q ss_pred             HHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHh-cCCCCCCCC---CccceeHHHHHHHHHHhhcc
Q 039049          164 TIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVK-GLRGEYPNT---TVGFVHIDDVVGAHILAMEE  239 (305)
Q Consensus       164 ~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~i~v~D~a~~~~~~~~~  239 (305)
                      .++|..+++..    -+.+|+||+.+||..+.    ++..+.....+ +....++.+   ....+||-|+|.+|+.++..
T Consensus       193 ~~gE~aVrdaf----PeAtIirPa~iyG~eDr----fln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkD  264 (391)
T KOG2865|consen  193 AAGEEAVRDAF----PEATIIRPADIYGTEDR----FLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKD  264 (391)
T ss_pred             hhhHHHHHhhC----Ccceeechhhhcccchh----HHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccC
Confidence            99999997653    57899999999998642    22222222222 222223333   67889999999999999999


Q ss_pred             cccCc-eEEEe-cCCcCHHHHHHHHHHhC
Q 039049          240 TRASG-RLICS-SSVAHWSPIIEMLKATY  266 (305)
Q Consensus       240 ~~~~~-~~~~~-~~~~s~~el~~~i~~~~  266 (305)
                      +.+.| .|-.. ...+...||++.+-+..
T Consensus       265 p~s~Gktye~vGP~~yql~eLvd~my~~~  293 (391)
T KOG2865|consen  265 PDSMGKTYEFVGPDRYQLSELVDIMYDMA  293 (391)
T ss_pred             ccccCceeeecCCchhhHHHHHHHHHHHH
Confidence            87654 68775 57899999999997765

>PRK06182 short chain dehydrogenase; Validated

Probab=99.91  E-value=7.1e-23  Score=172.22  Aligned_cols=213  Identities=16%  Similarity=0.117  Sum_probs=150.5

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      +++++||||+|+||++++++|+++|++|++++|+.+.....   .     ..++.++.+|+.|.+++.++++       +
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~---~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~   74 (273)
T PRK06182          3 KKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDL---A-----SLGVHPLSLDVTDEASIKAAVDTIIAEEGR   74 (273)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---H-----hCCCeEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            37899999999999999999999999999999986533221   1     1257889999999998888775       6


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHH----HHHhcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLS----SCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~----~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|+|||+||......    ..+.+...+++|+.++..+++    .+++. +.+++|++||.....+.+.           
T Consensus        75 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~g~iv~isS~~~~~~~~~-----------  142 (273)
T PRK06182         75 IDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQ-RSGRIINISSMGGKIYTPL-----------  142 (273)
T ss_pred             CCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhc-CCCEEEEEcchhhcCCCCC-----------
Confidence            899999999865432    334567788999988555544    55555 6679999999653222111           


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHH---HcCCcEEEEecCceecCCCCCCC---------CchHH----HHHHHH
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAK---DCGIDMVVVNPSFVVGPLLAPQP---------TSTLL----LILAMV  209 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~i~Rp~~v~G~~~~~~~---------~~~~~----~~~~~~  209 (305)
                                ...|+.+|.+.+.+.+.+..   .++++++++||+.+.++......         .....    +.....
T Consensus       143 ----------~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (273)
T PRK06182        143 ----------GAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMR  212 (273)
T ss_pred             ----------ccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHH
Confidence                      05699999999998776654   35899999999999887532100         00000    000111


Q ss_pred             hcCCCCCCCCCccceeHHHHHHHHHHhhcccccCceEEEe
Q 039049          210 KGLRGEYPNTTVGFVHIDDVVGAHILAMEETRASGRLICS  249 (305)
Q Consensus       210 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~  249 (305)
                      ..      ...+.+.+++|+|++++.+++.......|+++
T Consensus       213 ~~------~~~~~~~~~~~vA~~i~~~~~~~~~~~~~~~g  246 (273)
T PRK06182        213 ST------YGSGRLSDPSVIADAISKAVTARRPKTRYAVG  246 (273)
T ss_pred             Hh------hccccCCCHHHHHHHHHHHHhCCCCCceeecC
Confidence            00      01345789999999999999875555567664

>PRK06128 oxidoreductase; Provisional

Probab=99.91  E-value=2.2e-22  Score=171.43  Aligned_cols=222  Identities=14%  Similarity=0.059  Sum_probs=157.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |++|||||+|+||+++++.|++.|++|++..|+.+................++.++++|+.|.+++.++++       ++
T Consensus        56 k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  135 (300)
T PRK06128         56 RKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELGGL  135 (300)
T ss_pred             CEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhCCC
Confidence            68999999999999999999999999988877543211111111111223367889999999888777664       67


Q ss_pred             CEEEEeccccccC-----CCCchhhhhhhhhHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCCCcccCCCCCCC
Q 039049           75 DGVFHTASPVLVP-----YDNNIQATLIDPCIKGTLNVLSSCKKA-KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSD  148 (305)
Q Consensus        75 d~Vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~  148 (305)
                      |+||||||.....     ...+.+...+++|+.++.++++++... ....+||++||...+.+.+..             
T Consensus       136 D~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-------------  202 (300)
T PRK06128        136 DILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPTL-------------  202 (300)
T ss_pred             CEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCCc-------------
Confidence            9999999975321     134567889999999999999998753 122589999998866543211             


Q ss_pred             cccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcccee
Q 039049          149 PDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVH  225 (305)
Q Consensus       149 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  225 (305)
                              ..|+.+|.+.+.+++.++.+   .|+++++++|+.+.++..... ......+.......+      ...+..
T Consensus       203 --------~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~-~~~~~~~~~~~~~~p------~~r~~~  267 (300)
T PRK06128        203 --------LDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSG-GQPPEKIPDFGSETP------MKRPGQ  267 (300)
T ss_pred             --------hhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccC-CCCHHHHHHHhcCCC------CCCCcC
Confidence                    55999999999999888766   489999999999999864321 111112222211111      345789


Q ss_pred             HHHHHHHHHHhhccccc---CceEEEecC
Q 039049          226 IDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       226 v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      .+|++.++++++.....   +..+++++.
T Consensus       268 p~dva~~~~~l~s~~~~~~~G~~~~v~gg  296 (300)
T PRK06128        268 PVEMAPLYVLLASQESSYVTGEVFGVTGG  296 (300)
T ss_pred             HHHHHHHHHHHhCccccCccCcEEeeCCC
Confidence            99999999999875432   445777543

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.91  E-value=1.8e-22  Score=168.62  Aligned_cols=217  Identities=17%  Similarity=0.096  Sum_probs=149.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|+||+++++.|+++|++|++++|+.....   ..........++.++++|+.|.+++.++++       ++
T Consensus         9 k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~---~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (260)
T PRK12823          9 KVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHE---VAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI   85 (260)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHH---HHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999743111   111111223467889999999887776654       57


Q ss_pred             CEEEEecccccc-----CCCCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           75 DGVFHTASPVLV-----PYDNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        75 d~Vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      |++||+||....     ....+.+...+++|+.++..+++.+.    +. +..+||++||...++..             
T Consensus        86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~~~~~~~-------------  151 (260)
T PRK12823         86 DVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQ-GGGAIVNVSSIATRGIN-------------  151 (260)
T ss_pred             eEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCeEEEEcCccccCCC-------------
Confidence            999999985421     11344566678899988876665543    44 55799999998653210             


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCC--------C-CCc-hHHHHHHHHhcC
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAP--------Q-PTS-TLLLILAMVKGL  212 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~--------~-~~~-~~~~~~~~~~~~  212 (305)
                          .      ..|+.+|.+.+.+.+.++.++   ++++++++|+.++++....        . ... ...++.....+.
T Consensus       152 ----~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (260)
T PRK12823        152 ----R------VPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSS  221 (260)
T ss_pred             ----C------CccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccC
Confidence                0      459999999999999988765   8999999999999974110        0 000 111222222222


Q ss_pred             CCCCCCCCccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          213 RGEYPNTTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       213 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      +      ..-+.+++|+++++.+++....   .+..+++.+.
T Consensus       222 ~------~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg  257 (260)
T PRK12823        222 L------MKRYGTIDEQVAAILFLASDEASYITGTVLPVGGG  257 (260)
T ss_pred             C------cccCCCHHHHHHHHHHHcCcccccccCcEEeecCC
Confidence            1      2335689999999999987542   2445777543

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.2e-22  Score=168.60  Aligned_cols=215  Identities=17%  Similarity=0.166  Sum_probs=156.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|+||++++++|+++|++|++++|+.........  .......++.++.+|+.|.+++.++++       ++
T Consensus         7 k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~--~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   84 (250)
T PRK07774          7 KVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAK--QIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI   84 (250)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--HHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            679999999999999999999999999999998653322211  111112357788999999988776654       57


Q ss_pred             CEEEEeccccccC-------CCCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCC
Q 039049           75 DGVFHTASPVLVP-------YDNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNES  144 (305)
Q Consensus        75 d~Vi~~a~~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~  144 (305)
                      |+|||+||.....       ...+.+...+++|+.++.++++++...   .+.++||++||..++.+.            
T Consensus        85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------  152 (250)
T PRK07774         85 DYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLYS------------  152 (250)
T ss_pred             CEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCCc------------
Confidence            9999999975321       123455667899999999999888653   135699999998764321            


Q ss_pred             CCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCc
Q 039049          145 HWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTV  221 (305)
Q Consensus       145 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (305)
                                  +.|+.+|.+.|.+++.+.+++   ++++++++|+.+..+......  ..........+.+      ..
T Consensus       153 ------------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~--~~~~~~~~~~~~~------~~  212 (250)
T PRK07774        153 ------------NFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVT--PKEFVADMVKGIP------LS  212 (250)
T ss_pred             ------------cccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccC--CHHHHHHHHhcCC------CC
Confidence                        569999999999999988774   799999999998877643221  1123333333332      12


Q ss_pred             cceeHHHHHHHHHHhhcccc---cCceEEEec
Q 039049          222 GFVHIDDVVGAHILAMEETR---ASGRLICSS  250 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~  250 (305)
                      -+.+++|++++++.++....   .+..|++.+
T Consensus       213 ~~~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~  244 (250)
T PRK07774        213 RMGTPEDLVGMCLFLLSDEASWITGQIFNVDG  244 (250)
T ss_pred             CCcCHHHHHHHHHHHhChhhhCcCCCEEEECC
Confidence            35679999999999988643   345688854

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.91  E-value=1.5e-22  Score=167.55  Aligned_cols=217  Identities=19%  Similarity=0.167  Sum_probs=155.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++|+||||+|+||+++++.|+++|++|++++|++.+......  .......++.++.+|+.|++++.++++       ++
T Consensus         6 ~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (246)
T PRK05653          6 KTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAA--ELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL   83 (246)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH--HHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999998764332211  111223468899999999988877665       46


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |+|||+||......    ..+.....++.|+.++.++++.+.    +. +.++||++||.....+...            
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~ii~~ss~~~~~~~~~------------  150 (246)
T PRK05653         84 DILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKA-RYGRIVNISSVSGVTGNPG------------  150 (246)
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEECcHHhccCCCC------------
Confidence            99999999865432    233456678999999999998884    44 6689999999764332110            


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                         .      ..|+.+|.+.+.+.+.++++   .+++++++||+.++++.....   ............+      ...+
T Consensus       151 ---~------~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~---~~~~~~~~~~~~~------~~~~  212 (246)
T PRK05653        151 ---Q------TNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGL---PEEVKAEILKEIP------LGRL  212 (246)
T ss_pred             ---C------cHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhh---hHHHHHHHHhcCC------CCCC
Confidence               1      56999999999988887655   489999999999999864320   1111111111111      3668


Q ss_pred             eeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          224 VHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      ++++|+++++.+++.....   +..|++++.
T Consensus       213 ~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg  243 (246)
T PRK05653        213 GQPEEVANAVAFLASDAASYITGQVIPVNGG  243 (246)
T ss_pred             cCHHHHHHHHHHHcCchhcCccCCEEEeCCC
Confidence            9999999999999875332   345777653

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.91  E-value=2.1e-22  Score=166.94  Aligned_cols=219  Identities=16%  Similarity=0.132  Sum_probs=154.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcC-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQG-------V   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-------~   74 (305)
                      ++++||||+|+||++++++|+++|++|+++.+....... ...........++.++++|+.|.+.+.+++++       +
T Consensus         7 ~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (247)
T PRK12935          7 KVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAE-NLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGKV   85 (247)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHH-HHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            579999999999999999999999999876553321111 11112222234688999999999988877753       7


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      |+|||+|+......    ..+.+...+++|+.++.++++.+...   .+.++||++||...+.+...             
T Consensus        86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------------  152 (247)
T PRK12935         86 DILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFG-------------  152 (247)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCC-------------
Confidence            99999999865432    23566778999999999999988642   14468999999765432211             


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccce
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFV  224 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  224 (305)
                        .      ..|+.+|.+.+.+.+.+..+.   ++++++++|+.+.++.....   ..........+..      .+.++
T Consensus       153 --~------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~---~~~~~~~~~~~~~------~~~~~  215 (247)
T PRK12935        153 --Q------TNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEV---PEEVRQKIVAKIP------KKRFG  215 (247)
T ss_pred             --C------cchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhc---cHHHHHHHHHhCC------CCCCc
Confidence              1      569999999999888777654   89999999999987642211   1111122222211      46789


Q ss_pred             eHHHHHHHHHHhhccc--ccCceEEEecC
Q 039049          225 HIDDVVGAHILAMEET--RASGRLICSSS  251 (305)
Q Consensus       225 ~v~D~a~~~~~~~~~~--~~~~~~~~~~~  251 (305)
                      +++|++++++++++..  ..+..||+++.
T Consensus       216 ~~edva~~~~~~~~~~~~~~g~~~~i~~g  244 (247)
T PRK12935        216 QADEIAKGVVYLCRDGAYITGQQLNINGG  244 (247)
T ss_pred             CHHHHHHHHHHHcCcccCccCCEEEeCCC
Confidence            9999999999998754  23567888654

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.9e-22  Score=167.61  Aligned_cols=210  Identities=16%  Similarity=0.113  Sum_probs=151.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|+||+++++.|+++|++|+++.|+.+.......  ... ...++.++++|+.|++++.++++       ++
T Consensus         6 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~--~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   82 (252)
T PRK06138          6 RVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAA--AIA-AGGRAFARQGDVGSAEAVEALVDFVAARWGRL   82 (252)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHH--HHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            589999999999999999999999999999998653322111  111 13468899999999998887764       68


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |+|||+|+......    ..+.+...+++|+.++.++.+.+    ++. +.++||++||....++....           
T Consensus        83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~~sS~~~~~~~~~~-----------  150 (252)
T PRK06138         83 DVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQ-GGGSIVNTASQLALAGGRGR-----------  150 (252)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhc-CCeEEEEECChhhccCCCCc-----------
Confidence            99999999765422    33445667899999998777665    344 66799999998655432211           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCc--hHHHHHHHHhcCCCCCCCCCc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTS--TLLLILAMVKGLRGEYPNTTV  221 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  221 (305)
                                ..|+.+|.+.+.+++.++.++   +++++++||+.++++........  ....+........     ...
T Consensus       151 ----------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~-----~~~  215 (252)
T PRK06138        151 ----------AAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARH-----PMN  215 (252)
T ss_pred             ----------cHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcC-----CCC
Confidence                      669999999999999887665   89999999999998853321110  0111111111111     123


Q ss_pred             cceeHHHHHHHHHHhhcccc
Q 039049          222 GFVHIDDVVGAHILAMEETR  241 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~~  241 (305)
                      .+++++|++++++.++.++.
T Consensus       216 ~~~~~~d~a~~~~~l~~~~~  235 (252)
T PRK06138        216 RFGTAEEVAQAALFLASDES  235 (252)
T ss_pred             CCcCHHHHHHHHHHHcCchh
Confidence            47899999999999998754

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.91  E-value=1.9e-22  Score=167.42  Aligned_cols=220  Identities=20%  Similarity=0.159  Sum_probs=155.5

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      ++++|||||+|+||+++++.|++.|++|++++|+.........  .......++.++++|+.|.++++++++       +
T Consensus         3 ~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   80 (250)
T TIGR03206         3 DKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAA--DIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP   80 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHH--HHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999999999999999998653322211  111123468899999999988887764       5


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|+|||+|+......    +.+.+...+++|+.++.++++.+.    +. +.+++|++||...+++....          
T Consensus        81 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~iss~~~~~~~~~~----------  149 (250)
T TIGR03206        81 VDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVER-GAGRIVNIASDAARVGSSGE----------  149 (250)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEECchhhccCCCCC----------
Confidence            899999998754321    233456679999999999888775    34 56799999998766543221          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCC---CchHHHHHHHHhcCCCCCCCC
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQP---TSTLLLILAMVKGLRGEYPNT  219 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  219 (305)
                                 ..|+.+|.+.+.+.+.++.+.   +++++++||+.++++......   ......+.......+      
T Consensus       150 -----------~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  212 (250)
T TIGR03206       150 -----------AVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIP------  212 (250)
T ss_pred             -----------chHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCC------
Confidence                       569999999999988887664   899999999999988532110   001111122221111      


Q ss_pred             CccceeHHHHHHHHHHhhccccc---CceEEEec
Q 039049          220 TVGFVHIDDVVGAHILAMEETRA---SGRLICSS  250 (305)
Q Consensus       220 ~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~  250 (305)
                      ...+...+|+|+++..++..+..   +..+++++
T Consensus       213 ~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~  246 (250)
T TIGR03206       213 LGRLGQPDDLPGAILFFSSDDASFITGQVLSVSG  246 (250)
T ss_pred             ccCCcCHHHHHHHHHHHcCcccCCCcCcEEEeCC
Confidence            23357789999999999876432   44566654

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.7e-22  Score=169.12  Aligned_cols=219  Identities=14%  Similarity=0.132  Sum_probs=151.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      +++|||||+|+||+++++.|+++|++|++++|+++......  .....  .++.++.+|+.|++.+.++++       ++
T Consensus        12 ~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   87 (264)
T PRK12829         12 LRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATA--ARLPG--AKVTATVADVADPAQVERVFDTAVERFGGL   87 (264)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--HHHhc--CceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            68999999999999999999999999999999765332211  11111  156889999999988877664       68


Q ss_pred             CEEEEeccccccC-----CCCchhhhhhhhhHHHHHHHHHHHHhc---CCc-cEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           75 DGVFHTASPVLVP-----YDNNIQATLIDPCIKGTLNVLSSCKKA---KSV-KRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        75 d~Vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~-~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      |+|||+|+.....     ...+.+...++.|+.++.++++.+...   .+. ++|+++||.....+.+.           
T Consensus        88 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~-----------  156 (264)
T PRK12829         88 DVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPG-----------  156 (264)
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCC-----------
Confidence            9999999986221     134456778999999999998887321   144 57888887654322111           


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCC--------chHHHHHHHHhcCCC
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPT--------STLLLILAMVKGLRG  214 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~--------~~~~~~~~~~~~~~~  214 (305)
                          .      ..|+.+|...|.+++.++.+.   +++++++||+.++|+.......        .............  
T Consensus       157 ----~------~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  224 (264)
T PRK12829        157 ----R------TPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKI--  224 (264)
T ss_pred             ----C------chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcC--
Confidence                0      459999999999998887653   8999999999999986422110        0000011111110  


Q ss_pred             CCCCCCccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          215 EYPNTTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       215 ~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                          ....+++++|++.++..++....   .+..|+++++
T Consensus       225 ----~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~g  260 (264)
T PRK12829        225 ----SLGRMVEPEDIAATALFLASPAARYITGQAISVDGN  260 (264)
T ss_pred             ----CCCCCCCHHHHHHHHHHHcCccccCccCcEEEeCCC
Confidence                13468999999999999886432   2445777543

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.91  E-value=2e-22  Score=167.77  Aligned_cols=219  Identities=18%  Similarity=0.184  Sum_probs=155.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||++++++|+++|++|++++|+.+......  ......+.++.++++|+.|.+++.++++       .+
T Consensus        11 k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   88 (255)
T PRK07523         11 RRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAA--ESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI   88 (255)
T ss_pred             CEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH--HHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            68999999999999999999999999999999865332211  1122223358889999999988888775       47


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      |+|||+||......    ..+.+...+++|+.++.++++++.+.   .+.+++|++||.....+.+.             
T Consensus        89 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~-------------  155 (255)
T PRK07523         89 DILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPG-------------  155 (255)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCC-------------
Confidence            99999999865432    23445667889999999999988643   15578999999754322111             


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccce
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFV  224 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  224 (305)
                        .      ..|+.+|...+.+++.++.+   ++++++++||+.+.++........ ...........+      ...+.
T Consensus       156 --~------~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~-~~~~~~~~~~~~------~~~~~  220 (255)
T PRK07523        156 --I------APYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVAD-PEFSAWLEKRTP------AGRWG  220 (255)
T ss_pred             --C------ccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccC-HHHHHHHHhcCC------CCCCc
Confidence              1      56999999999999888764   589999999999998853321111 111111111111      34578


Q ss_pred             eHHHHHHHHHHhhccccc---CceEEEec
Q 039049          225 HIDDVVGAHILAMEETRA---SGRLICSS  250 (305)
Q Consensus       225 ~v~D~a~~~~~~~~~~~~---~~~~~~~~  250 (305)
                      .++|+|.++++++.....   +..+++.+
T Consensus       221 ~~~dva~~~~~l~~~~~~~~~G~~i~~~g  249 (255)
T PRK07523        221 KVEELVGACVFLASDASSFVNGHVLYVDG  249 (255)
T ss_pred             CHHHHHHHHHHHcCchhcCccCcEEEECC
Confidence            899999999999975432   34577754

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.90  E-value=2.2e-22  Score=167.67  Aligned_cols=220  Identities=17%  Similarity=0.157  Sum_probs=154.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+...... ...........++.++++|+.+++++.++++       .+
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELA-ATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI   81 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHH-HHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            679999999999999999999999999999987532111 1111111123468899999999888777654       57


Q ss_pred             CEEEEeccccccC------CCCchhhhhhhhhHHHHHHHHHHHHhc----CC-----ccEEEEeccceeeeccCCCCCCc
Q 039049           75 DGVFHTASPVLVP------YDNNIQATLIDPCIKGTLNVLSSCKKA----KS-----VKRVVLTSSCSSIRYRHDAQQVS  139 (305)
Q Consensus        75 d~Vi~~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~-----~~~~v~~SS~~~~~~~~~~~~~~  139 (305)
                      |+||||||.....      ...+.+...+++|+.++.++++++...    .+     .++||++||...+.+....    
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~----  157 (256)
T PRK12745         82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNR----  157 (256)
T ss_pred             CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCC----
Confidence            9999999975432      133566778999999999998887432    11     4679999998765432211    


Q ss_pred             ccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCC
Q 039049          140 PLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEY  216 (305)
Q Consensus       140 ~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  216 (305)
                                       ..|+.+|.+.|.+++.++.+   .+++++++||+.+.++......   .........+. .  
T Consensus       158 -----------------~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~---~~~~~~~~~~~-~--  214 (256)
T PRK12745        158 -----------------GEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVT---AKYDALIAKGL-V--  214 (256)
T ss_pred             -----------------cccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccc---hhHHhhhhhcC-C--
Confidence                             56999999999999988765   5899999999999887533211   11111111111 1  


Q ss_pred             CCCCccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          217 PNTTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       217 ~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                        ....+.+++|+++++..++....   .+..|++.+.
T Consensus       215 --~~~~~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~gg  250 (256)
T PRK12745        215 --PMPRWGEPEDVARAVAALASGDLPYSTGQAIHVDGG  250 (256)
T ss_pred             --CcCCCcCHHHHHHHHHHHhCCcccccCCCEEEECCC
Confidence              13468899999999999886542   2456788653

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.90  E-value=3.8e-22  Score=166.57  Aligned_cols=226  Identities=13%  Similarity=0.014  Sum_probs=152.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhh-hhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGF-LWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      ++|+||||+|+||+++++.|+++|++|++++|+......... +.... ...++.++.+|+.+.+++.++++       .
T Consensus         3 k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          3 QVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEY-GEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhc-CCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            569999999999999999999999999999998653322211 11110 11368899999999888777654       5


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CC-ccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KS-VKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~-~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|+|||+||......    ..+.+...+++|+.++.++++.+...   .+ -.++|++||.....+...           
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~-----------  150 (259)
T PRK12384         82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKH-----------  150 (259)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCC-----------
Confidence            799999999765432    33456677899999988877776442   14 358999999653222111           


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHH---HcCCcEEEEecCceecCCCCCCCCchHHHHHHHH--hcC---CCCCC
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAK---DCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMV--KGL---RGEYP  217 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~--~~~---~~~~~  217 (305)
                          .      ..|+.+|.+.+.+++.++.   ..++++.++||+.++++.....  ....+.....  .+.   .....
T Consensus       151 ----~------~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  218 (259)
T PRK12384        151 ----N------SGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQS--LLPQYAKKLGIKPDEVEQYYIDK  218 (259)
T ss_pred             ----C------chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhh--hhHHHHHhcCCChHHHHHHHHHh
Confidence                1      5699999999998888875   3689999999999887643221  1111100000  000   00001


Q ss_pred             CCCccceeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          218 NTTVGFVHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       218 ~~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      ...+.+++++|++.+++.++.....   +..|++++.
T Consensus       219 ~~~~~~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g  255 (259)
T PRK12384        219 VPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGG  255 (259)
T ss_pred             CcccCCCCHHHHHHHHHHHcCcccccccCceEEEcCC
Confidence            1156789999999999999875432   445888654

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1e-22  Score=168.88  Aligned_cols=224  Identities=18%  Similarity=0.117  Sum_probs=152.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|+||+++++.|++.|++|++++|+...... .....+.....++.++++|+.|++++.++++       ++
T Consensus         7 k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~-~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   85 (248)
T PRK07806          7 KTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRAN-KVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGGL   85 (248)
T ss_pred             cEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHH-HHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            689999999999999999999999999999997542111 0011111113367889999999998877664       58


Q ss_pred             CEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCCCcccCCCCCCCccccc
Q 039049           75 DGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAK-SVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCK  153 (305)
Q Consensus        75 d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~  153 (305)
                      |+|||+|+.....  ...+...+++|+.++.++++++.+.. ...++|++||......        +..+..+.  .   
T Consensus        86 d~vi~~ag~~~~~--~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~--------~~~~~~~~--~---  150 (248)
T PRK07806         86 DALVLNASGGMES--GMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFI--------PTVKTMPE--Y---  150 (248)
T ss_pred             cEEEECCCCCCCC--CCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcC--------ccccCCcc--c---
Confidence            9999999864322  22345678999999999999998641 2358999999543211        10111111  1   


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCC-chHHHHHHHHhcCCCCCCCCCccceeHHHH
Q 039049          154 HYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPT-STLLLILAMVKGLRGEYPNTTVGFVHIDDV  229 (305)
Q Consensus       154 ~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  229 (305)
                         ..|+.+|.++|.+++.++.+   .++++++++|+.+-++....... .....+    .....  +  ...+++++|+
T Consensus       151 ---~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~----~~~~~--~--~~~~~~~~dv  219 (248)
T PRK07806        151 ---EPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAI----EARRE--A--AGKLYTVSEF  219 (248)
T ss_pred             ---cHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHH----HHHHh--h--hcccCCHHHH
Confidence               56999999999999888755   47999999998776653211000 000000    00000  0  2468999999


Q ss_pred             HHHHHHhhccccc-CceEEEecCC
Q 039049          230 VGAHILAMEETRA-SGRLICSSSV  252 (305)
Q Consensus       230 a~~~~~~~~~~~~-~~~~~~~~~~  252 (305)
                      |++++.+++.... +..|++++..
T Consensus       220 a~~~~~l~~~~~~~g~~~~i~~~~  243 (248)
T PRK07806        220 AAEVARAVTAPVPSGHIEYVGGAD  243 (248)
T ss_pred             HHHHHHHhhccccCccEEEecCcc
Confidence            9999999997654 4458887654

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.8e-22  Score=169.69  Aligned_cols=235  Identities=18%  Similarity=0.099  Sum_probs=158.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|+||+++++.|+++|++|++..|+.+......  ..+.....++.++++|+.|.+++.++++       ++
T Consensus         7 k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~--~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   84 (275)
T PRK05876          7 RGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAV--NHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV   84 (275)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--HHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999998865433221  1122223367889999999998887765       47


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |+|||+||......    ..+.+...+++|+.++.++.+.+.    +.+..+++|++||...+.+.+..           
T Consensus        85 d~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~-----------  153 (275)
T PRK05876         85 DVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGL-----------  153 (275)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCC-----------
Confidence            99999999754332    344566778999999999998874    23124689999998765432211           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhc-CCCCCCC--CC
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKG-LRGEYPN--TT  220 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~  220 (305)
                                ..|+.+|...+.+.+.+..+   .++++++++|+.+.++...... ..  ........ .....+.  ..
T Consensus       154 ----------~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~  220 (275)
T PRK05876        154 ----------GAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSE-RI--RGAACAQSSTTGSPGPLPLQ  220 (275)
T ss_pred             ----------chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchh-hh--cCcccccccccccccccccc
Confidence                      56999999866665555543   4899999999999877532110 00  00000000 0111111  25


Q ss_pred             ccceeHHHHHHHHHHhhcccccCceEEEecCCcCHHHHHHHHHHhC
Q 039049          221 VGFVHIDDVVGAHILAMEETRASGRLICSSSVAHWSPIIEMLKATY  266 (305)
Q Consensus       221 ~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~  266 (305)
                      +++++++|+|++++.++++.   ..+.+. ......++.+.+.+..
T Consensus       221 ~~~~~~~dva~~~~~ai~~~---~~~~~~-~~~~~~~~~~~~~~~~  262 (275)
T PRK05876        221 DDNLGVDDIAQLTADAILAN---RLYVLP-HAASRASIRRRFERID  262 (275)
T ss_pred             ccCCCHHHHHHHHHHHHHcC---CeEEec-ChhhHHHHHHHHHHHH
Confidence            67899999999999999864   234443 3345555555555443

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.90  E-value=4e-22  Score=165.93  Aligned_cols=220  Identities=15%  Similarity=0.136  Sum_probs=153.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEE-EeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--------
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTT-VRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--------   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--------   72 (305)
                      ++|+||||+|+||+++++.|+++|++|+++ .|+......  ..........+++++++|+.|.+++.++++        
T Consensus         7 ~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~--~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~   84 (254)
T PRK12746          7 KVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADE--TIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI   84 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHH--HHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence            589999999999999999999999999775 465432211  111122123468889999999998877665        


Q ss_pred             -----CCCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCCCcccC
Q 039049           73 -----GVDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA-KSVKRVVLTSSCSSIRYRHDAQQVSPLN  142 (305)
Q Consensus        73 -----~~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~  142 (305)
                           ++|+|||+||......    ..+.....+++|+.++.++++.+... ...+++|++||..++.+.+..       
T Consensus        85 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~~~-------  157 (254)
T PRK12746         85 RVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTGS-------  157 (254)
T ss_pred             ccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCCCC-------
Confidence                 4899999999765432    23334667789999999999988653 133589999998765432111       


Q ss_pred             CCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCC
Q 039049          143 ESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNT  219 (305)
Q Consensus       143 E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (305)
                                    ..|+.+|.+.|.+.+.+..+   .++++++++|+.++++........ .. +........ .    
T Consensus       158 --------------~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~-~~-~~~~~~~~~-~----  216 (254)
T PRK12746        158 --------------IAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDD-PE-IRNFATNSS-V----  216 (254)
T ss_pred             --------------cchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccC-hh-HHHHHHhcC-C----
Confidence                          56999999999998887765   479999999999988753221111 11 111111111 1    


Q ss_pred             CccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          220 TVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       220 ~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      ...+++++|+++++..++..+.   .+..|++.+.
T Consensus       217 ~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~~~  251 (254)
T PRK12746        217 FGRIGQVEDIADAVAFLASSDSRWVTGQIIDVSGG  251 (254)
T ss_pred             cCCCCCHHHHHHHHHHHcCcccCCcCCCEEEeCCC
Confidence            3457899999999998887643   2456887543

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.90  E-value=2.5e-22  Score=166.74  Aligned_cols=220  Identities=17%  Similarity=0.118  Sum_probs=152.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEE-EeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTT-VRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      ++++||||+|+||++++++|+++|++|+++ .|+........  ......+.++.++.+|+.|++++.++++       .
T Consensus         5 ~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (250)
T PRK08063          5 KVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETA--EEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR   82 (250)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH--HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999998764 66654322111  1111223468899999999998887775       4


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      +|+|||+|+......    ..+.....+++|+.++.++++++...   .+.++||++||...+.+.+.            
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~------------  150 (250)
T PRK08063         83 LDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLEN------------  150 (250)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCC------------
Confidence            799999999754332    23334556789999999999888653   14569999999764332111            


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                         .      ..|+.+|.+.|.+++.++.+   .++++++++|+.+..+...... .............+      ...+
T Consensus       151 ---~------~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~-~~~~~~~~~~~~~~------~~~~  214 (250)
T PRK08063        151 ---Y------TTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFP-NREELLEDARAKTP------AGRM  214 (250)
T ss_pred             ---c------cHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhcc-CchHHHHHHhcCCC------CCCC
Confidence               1      56999999999999888765   4899999999999877532211 11111111111111      2347


Q ss_pred             eeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          224 VHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      ++++|+|++++++++.+..   +..+++.+.
T Consensus       215 ~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg  245 (250)
T PRK08063        215 VEPEDVANAVLFLCSPEADMIRGQTIIVDGG  245 (250)
T ss_pred             cCHHHHHHHHHHHcCchhcCccCCEEEECCC
Confidence            9999999999999976532   345666543

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.90  E-value=4.8e-22  Score=177.01  Aligned_cols=230  Identities=18%  Similarity=0.129  Sum_probs=158.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhh-hhh--c--cC--ccCceEEEEccCCCcchHHHHhcCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGF-LWE--L--NG--AEERLKIMKADLLMEGSFDEAIQGV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~--~--~~--~~~~~~~~~~D~~d~~~~~~~~~~~   74 (305)
                      ++||||||+|+||++++++|++.|++|++++|+.++...... +..  +  .+  ...++.++.+|+.|.+++.+++.++
T Consensus        81 KvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aLggi  160 (576)
T PLN03209         81 DLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPALGNA  160 (576)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHhcCC
Confidence            579999999999999999999999999999998764432211 100  0  00  1135889999999999999999999


Q ss_pred             CEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccc
Q 039049           75 DGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKH  154 (305)
Q Consensus        75 d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  154 (305)
                      |+|||++|.....  ...+...+++|+.++.+++++++.. +++|||++||.++....        ..+. .....    
T Consensus       161 DiVVn~AG~~~~~--v~d~~~~~~VN~~Gt~nLl~Aa~~a-gVgRIV~VSSiga~~~g--------~p~~-~~~sk----  224 (576)
T PLN03209        161 SVVICCIGASEKE--VFDVTGPYRIDYLATKNLVDAATVA-KVNHFILVTSLGTNKVG--------FPAA-ILNLF----  224 (576)
T ss_pred             CEEEEcccccccc--ccchhhHHHHHHHHHHHHHHHHHHh-CCCEEEEEccchhcccC--------cccc-chhhH----
Confidence            9999999875321  1123456789999999999999998 89999999998652110        0010 01111    


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCC-CccceeHHHHHHHH
Q 039049          155 YNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNT-TVGFVHIDDVVGAH  233 (305)
Q Consensus       155 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~D~a~~~  233 (305)
                        ..|...|..+|+.+.    .+|++++++||+.++++.........   +.       ....+. ....+..+|+|+++
T Consensus       225 --~~~~~~KraaE~~L~----~sGIrvTIVRPG~L~tp~d~~~~t~~---v~-------~~~~d~~~gr~isreDVA~vV  288 (576)
T PLN03209        225 --WGVLCWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETHN---LT-------LSEEDTLFGGQVSNLQVAELM  288 (576)
T ss_pred             --HHHHHHHHHHHHHHH----HcCCCEEEEECCeecCCccccccccc---ee-------eccccccCCCccCHHHHHHHH
Confidence              457788999988874    56999999999999887432110000   00       000111 23358999999999


Q ss_pred             HHhhccccc--CceEEEe-cC---CcCHHHHHHHHH
Q 039049          234 ILAMEETRA--SGRLICS-SS---VAHWSPIIEMLK  263 (305)
Q Consensus       234 ~~~~~~~~~--~~~~~~~-~~---~~s~~el~~~i~  263 (305)
                      +.++.++..  ..+|.+. +.   ...+.++++.+-
T Consensus       289 vfLasd~~as~~kvvevi~~~~~p~~~~~~~~~~ip  324 (576)
T PLN03209        289 ACMAKNRRLSYCKVVEVIAETTAPLTPMEELLAKIP  324 (576)
T ss_pred             HHHHcCchhccceEEEEEeCCCCCCCCHHHHHHhcc
Confidence            999987653  4457664 33   245555555543

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.90  E-value=6.5e-22  Score=164.10  Aligned_cols=216  Identities=15%  Similarity=0.134  Sum_probs=153.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcc-cchhhh-hhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDL-SKVGFL-WELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~-~~~~~~-~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      |+|+||||+|+||+++++.|+++|++|+++.|..... .....+ ........++.++.+|+.|.+.+.++++       
T Consensus         7 ~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   86 (249)
T PRK12827          7 RRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEEFG   86 (249)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            6899999999999999999999999999987753221 111111 1112223468899999999988887763       


Q ss_pred             CCCEEEEeccccccC----CCCchhhhhhhhhHHHHHHHHHHHH-----hcCCccEEEEeccceeeeccCCCCCCcccCC
Q 039049           73 GVDGVFHTASPVLVP----YDNNIQATLIDPCIKGTLNVLSSCK-----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNE  143 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~-----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E  143 (305)
                      ++|+|||+||.....    ...+.+...+++|+.++.++++++.     +. +.++||++||...+.+....        
T Consensus        87 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~~~--------  157 (249)
T PRK12827         87 RLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRAR-RGGRIVNIASVAGVRGNRGQ--------  157 (249)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-CCeEEEEECCchhcCCCCCC--------
Confidence            589999999986632    1334566788999999999999987     34 66799999998765442211        


Q ss_pred             CCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCC
Q 039049          144 SHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTT  220 (305)
Q Consensus       144 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (305)
                                   ..|+.+|.+.+.+++.++.+   .+++++++||+.++++......  ..   .......+      .
T Consensus       158 -------------~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~--~~---~~~~~~~~------~  213 (249)
T PRK12827        158 -------------VNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAA--PT---EHLLNPVP------V  213 (249)
T ss_pred             -------------chhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccc--hH---HHHHhhCC------C
Confidence                         56999999999998888765   3899999999999998643211  11   11111111      2


Q ss_pred             ccceeHHHHHHHHHHhhccccc---CceEEEec
Q 039049          221 VGFVHIDDVVGAHILAMEETRA---SGRLICSS  250 (305)
Q Consensus       221 ~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~  250 (305)
                      ..+.+++|+++++..++.....   +..+++.+
T Consensus       214 ~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~  246 (249)
T PRK12827        214 QRLGEPDEVAALVAFLVSDAASYVTGQVIPVDG  246 (249)
T ss_pred             cCCcCHHHHHHHHHHHcCcccCCccCcEEEeCC
Confidence            2356899999999998865332   33456643

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.90  E-value=2.2e-22  Score=167.77  Aligned_cols=223  Identities=14%  Similarity=0.111  Sum_probs=155.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|+||+++++.|+++|++|+++.|+.+.......  ..   ..++.++++|+.|.+++.++++       ++
T Consensus         7 ~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~--~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (257)
T PRK07067          7 KVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAAL--EI---GPAAIAVSLDVTRQDSIDRIVAAAVERFGGI   81 (257)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH--Hh---CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            469999999999999999999999999999998654332211  11   2257889999999988877665       57


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA----KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |++||+|+......    ..+.+...+++|+.++.++++++...    +...+||++||.....+.+             
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-------------  148 (257)
T PRK07067         82 DILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEA-------------  148 (257)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCC-------------
Confidence            99999999764321    34567778999999999999998543    1124799999965322211             


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHH---HHHHhcCCCCCCCCC
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLI---LAMVKGLRGEYPNTT  220 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~  220 (305)
                        +.      ..|+.+|...+.+.+.++.+   .++++++++|+.++++.............   ...... ...-....
T Consensus       149 --~~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  219 (257)
T PRK07067        149 --LV------SHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKR-LVGEAVPL  219 (257)
T ss_pred             --CC------chhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHH-HHhhcCCC
Confidence              11      66999999999999888764   58999999999999975322100000000   000000 00001125


Q ss_pred             ccceeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          221 VGFVHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       221 ~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      +.+++++|+|+++.+++.....   +..|+++++
T Consensus       220 ~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg  253 (257)
T PRK07067        220 GRMGVPDDLTGMALFLASADADYIVAQTYNVDGG  253 (257)
T ss_pred             CCccCHHHHHHHHHHHhCcccccccCcEEeecCC
Confidence            6799999999999999986532   556888643

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.7e-22  Score=168.52  Aligned_cols=210  Identities=19%  Similarity=0.144  Sum_probs=150.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+|+||||+|+||++++++|+++|++|+++.|++.......  ........++.++.+|+.|.+++.++++       ++
T Consensus         6 k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   83 (258)
T PRK07890          6 KVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVA--AEIDDLGRRALAVPTDITDEDQCANLVALALERFGRV   83 (258)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH--HHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCc
Confidence            68999999999999999999999999999999865433221  1111123468899999999988877664       57


Q ss_pred             CEEEEeccccccC-----CCCchhhhhhhhhHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           75 DGVFHTASPVLVP-----YDNNIQATLIDPCIKGTLNVLSSCKKA--KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        75 d~Vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      |+|||+|+.....     ...+.+...+++|+.++..+++++...  +..++||++||...+.+.+.             
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~-------------  150 (258)
T PRK07890         84 DALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQPK-------------  150 (258)
T ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCCC-------------
Confidence            9999999875431     134566778999999999999998653  12258999999765432211             


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCC--------chHHHHHHHHhcCCCCC
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPT--------STLLLILAMVKGLRGEY  216 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~--------~~~~~~~~~~~~~~~~~  216 (305)
                        .      ..|+.+|...+.+++.++.+   .+++++++||+.++++.......        .............    
T Consensus       151 --~------~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  218 (258)
T PRK07890        151 --Y------GAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANS----  218 (258)
T ss_pred             --c------chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcC----
Confidence              1      56999999999999988765   38999999999999986321100        0011111111111    


Q ss_pred             CCCCccceeHHHHHHHHHHhhccc
Q 039049          217 PNTTVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       217 ~~~~~~~i~v~D~a~~~~~~~~~~  240 (305)
                        ....+.+++|++++++.+++..
T Consensus       219 --~~~~~~~~~dva~a~~~l~~~~  240 (258)
T PRK07890        219 --DLKRLPTDDEVASAVLFLASDL  240 (258)
T ss_pred             --CccccCCHHHHHHHHHHHcCHh
Confidence              1334788999999999998753

>PRK06194 hypothetical protein; Provisional

Probab=99.90  E-value=1.8e-22  Score=171.02  Aligned_cols=215  Identities=11%  Similarity=0.036  Sum_probs=149.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      +++|||||+|+||+++++.|+++|++|++++|+.+......  ........++.++++|+.|.+++.++++       ++
T Consensus         7 k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i   84 (287)
T PRK06194          7 KVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAV--AELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV   84 (287)
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHH--HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999765332211  1111223468889999999998888775       47


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHH----HhcCCc------cEEEEeccceeeeccCCCCCCcc
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSC----KKAKSV------KRVVLTSSCSSIRYRHDAQQVSP  140 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~------~~~v~~SS~~~~~~~~~~~~~~~  140 (305)
                      |+|||+||......    ..+.+...+++|+.++.++.+++    .+. +.      .++|++||...+.+.+..     
T Consensus        85 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~~~~~~~g~iv~~sS~~~~~~~~~~-----  158 (287)
T PRK06194         85 HLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAA-AEKDPAYEGHIVNTASMAGLLAPPAM-----  158 (287)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc-CCCCCCCCeEEEEeCChhhccCCCCC-----
Confidence            99999999876532    33556667899999999977774    333 22      589999998765542111     


Q ss_pred             cCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcC-----CcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCC
Q 039049          141 LNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCG-----IDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGE  215 (305)
Q Consensus       141 ~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~-----~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  215 (305)
                                      ..|+.+|.+.+.+++.+..+++     +++..+.|+.+..+..            ....+.+..
T Consensus       159 ----------------~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~------------~~~~~~~~~  210 (287)
T PRK06194        159 ----------------GIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIW------------QSERNRPAD  210 (287)
T ss_pred             ----------------cchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccc------------cccccCchh
Confidence                            5699999999999998877654     5566666665544321            111111211


Q ss_pred             -CC--CCCccceeHHHHHHHHHHhhcccccCceEEEecCCcCHHHHHHHHHHhC
Q 039049          216 -YP--NTTVGFVHIDDVVGAHILAMEETRASGRLICSSSVAHWSPIIEMLKATY  266 (305)
Q Consensus       216 -~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~  266 (305)
                       .+  ...++|++++|.+..+....              .++..|+++.+.+.+
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~s~~dva~~i~~~~  250 (287)
T PRK06194        211 LANTAPPTRSQLIAQAMSQKAVGSG--------------KVTAEEVAQLVFDAI  250 (287)
T ss_pred             cccCccccchhhHHHHHHHhhhhcc--------------CCCHHHHHHHHHHHH
Confidence             22  23778888888877653221              167888888887765

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.90  E-value=4.5e-22  Score=165.28  Aligned_cols=218  Identities=18%  Similarity=0.169  Sum_probs=154.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|+||+++++.|+++|++|++++|++.+......  .... ..++.++++|+.|++++.++++       .+
T Consensus         6 ~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   82 (251)
T PRK07231          6 KVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAA--EILA-GGRAIAVAADVSDEADVEAAVAAALERFGSV   82 (251)
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--HHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999998754332211  1111 2368899999999998887764       57


Q ss_pred             CEEEEeccccccCC-----CCchhhhhhhhhHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           75 DGVFHTASPVLVPY-----DNNIQATLIDPCIKGTLNVLSSCKK----AKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        75 d~Vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      |+|||+|+......     +.+.+...+++|+.++.++++.+..    . +.++||++||...+++.+..          
T Consensus        83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~~~----------  151 (251)
T PRK07231         83 DILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGE-GGGAIVNVASTAGLRPRPGL----------  151 (251)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCcEEEEEcChhhcCCCCCc----------
Confidence            99999999754321     3455677899999988888777653    4 56799999998765543211          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCc-hHHHHHHHHhcCCCCCCCCCc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTS-TLLLILAMVKGLRGEYPNTTV  221 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  221 (305)
                                 ..|+.+|...+.+++.++.++   +++++.++|+.+.++........ ..........+.      ...
T Consensus       152 -----------~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~------~~~  214 (251)
T PRK07231        152 -----------GWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATI------PLG  214 (251)
T ss_pred             -----------hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCC------CCC
Confidence                       669999999999988887653   89999999999977643221110 001111111111      134


Q ss_pred             cceeHHHHHHHHHHhhccccc--Cce-EEEec
Q 039049          222 GFVHIDDVVGAHILAMEETRA--SGR-LICSS  250 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~~~--~~~-~~~~~  250 (305)
                      .+++++|+|.+++.++.....  .+. +.+.+
T Consensus       215 ~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~g  246 (251)
T PRK07231        215 RLGTPEDIANAALFLASDEASWITGVTLVVDG  246 (251)
T ss_pred             CCcCHHHHHHHHHHHhCccccCCCCCeEEECC
Confidence            578999999999999976432  233 55544

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.7e-22  Score=169.63  Aligned_cols=216  Identities=17%  Similarity=0.139  Sum_probs=152.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++|+||||+|+||+++++.|+++|++|++++|++.....          ..+++++++|+.|++++.++++       .+
T Consensus         5 ~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~----------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~   74 (270)
T PRK06179          5 KVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP----------IPGVELLELDVTDDASVQAAVDEVIARAGRI   74 (270)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc----------cCCCeeEEeecCCHHHHHHHHHHHHHhCCCC
Confidence            479999999999999999999999999999998653321          1267899999999998888776       46


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |+||||||......    ..+.....+++|+.++.++++.+    ++. +.++||++||...+.+.+..           
T Consensus        75 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~~-----------  142 (270)
T PRK06179         75 DVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQ-GSGRIINISSVLGFLPAPYM-----------  142 (270)
T ss_pred             CEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEECCccccCCCCCc-----------
Confidence            99999999865432    23456778999999999999885    445 67899999997654332111           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCc--hHHHHHHHHhcCCCCCCCCCc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTS--TLLLILAMVKGLRGEYPNTTV  221 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  221 (305)
                                ..|+.+|...+.+++.+..+   .++++++++|+.+.++........  .....................
T Consensus       143 ----------~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (270)
T PRK06179        143 ----------ALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVK  212 (270)
T ss_pred             ----------cHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccc
Confidence                      56999999999998887654   599999999999988754321110  000000000000000000122


Q ss_pred             cceeHHHHHHHHHHhhcccccCceEEEe
Q 039049          222 GFVHIDDVVGAHILAMEETRASGRLICS  249 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~~~~~~~~~~  249 (305)
                      .....+|+++.++.++..+.....|...
T Consensus       213 ~~~~~~~va~~~~~~~~~~~~~~~~~~~  240 (270)
T PRK06179        213 KADAPEVVADTVVKAALGPWPKMRYTAG  240 (270)
T ss_pred             cCCCHHHHHHHHHHHHcCCCCCeeEecC
Confidence            3467899999999999876655556543

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.90  E-value=3.6e-22  Score=172.75  Aligned_cols=265  Identities=21%  Similarity=0.258  Sum_probs=184.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC---CeEEEEEeCCCcccchhhhhh-------------ccCccCceEEEEccCCCc-
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG---HMVRTTVRDPEDLSKVGFLWE-------------LNGAEERLKIMKADLLME-   64 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g---~~V~~~~r~~~~~~~~~~~~~-------------~~~~~~~~~~~~~D~~d~-   64 (305)
                      |+|+|||||||+|.-+++.|+..-   .+++++.|.....+....+..             .+....++..+.||+.++ 
T Consensus        13 k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~~   92 (467)
T KOG1221|consen   13 KTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISEPD   92 (467)
T ss_pred             CeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccCcc
Confidence            789999999999999999999753   378999997654433322221             223345788999999763 


Q ss_pred             -----chHHHHhcCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCc
Q 039049           65 -----GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVS  139 (305)
Q Consensus        65 -----~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~  139 (305)
                           .++..+.+++|+|||+||...+   .+.......+|+.|+.++++.|++....+-+||+||..+. .....-.+.
T Consensus        93 LGis~~D~~~l~~eV~ivih~AAtvrF---de~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n-~~~~~i~E~  168 (467)
T KOG1221|consen   93 LGISESDLRTLADEVNIVIHSAATVRF---DEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSN-CNVGHIEEK  168 (467)
T ss_pred             cCCChHHHHHHHhcCCEEEEeeeeecc---chhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhhee-ccccccccc
Confidence                 4555667799999999999885   4566668899999999999999998889999999998876 332221223


Q ss_pred             ccCCCCCCCcc--------------------cccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC
Q 039049          140 PLNESHWSDPD--------------------YCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPT  199 (305)
Q Consensus       140 ~~~E~~~~~~~--------------------~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~  199 (305)
                      ++.+....++.                    .-..+.+.|..+|.++|.++...  ..++|++|+||+.|......+...
T Consensus       169 ~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~--~~~lPivIiRPsiI~st~~EP~pG  246 (467)
T KOG1221|consen  169 PYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKE--AENLPLVIIRPSIITSTYKEPFPG  246 (467)
T ss_pred             ccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhh--ccCCCeEEEcCCceeccccCCCCC
Confidence            33333321111                    01111377999999999999864  357999999999999987766433


Q ss_pred             chH------HHHHHHHhcCCC---CCCCCCccceeHHHHHHHHHHhhcc--cc----cCceEEEe-c--CCcCHHHHHHH
Q 039049          200 STL------LLILAMVKGLRG---EYPNTTVGFVHIDDVVGAHILAMEE--TR----ASGRLICS-S--SVAHWSPIIEM  261 (305)
Q Consensus       200 ~~~------~~~~~~~~~~~~---~~~~~~~~~i~v~D~a~~~~~~~~~--~~----~~~~~~~~-~--~~~s~~el~~~  261 (305)
                      .+.      .++....+|...   ..++...|+|.+|.++.+++.+.-.  ..    ...+||++ +  +++++.++.+.
T Consensus       247 Widn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~~e~  326 (467)
T KOG1221|consen  247 WIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDFIEL  326 (467)
T ss_pred             ccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHHHHH
Confidence            221      111111122111   1134478999999999999876521  11    13479984 3  48999999999


Q ss_pred             HHHhCCCCCCC
Q 039049          262 LKATYPSYPYE  272 (305)
Q Consensus       262 i~~~~~~~~~~  272 (305)
                      ..+.....|..
T Consensus       327 ~~~~~~~~Pl~  337 (467)
T KOG1221|consen  327 ALRYFEKIPLE  337 (467)
T ss_pred             HHHhcccCCcc
Confidence            99987544433

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.90  E-value=4.9e-22  Score=164.49  Aligned_cols=214  Identities=18%  Similarity=0.195  Sum_probs=154.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc---CCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ---GVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~Vi   78 (305)
                      ++++||||+|+||+++++.|+++|++|++++|+.++....   ...    .++.++.+|+.+.+.+.++++   ++|+||
T Consensus        10 ~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~---~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi   82 (245)
T PRK07060         10 KSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRL---AGE----TGCEPLRLDVGDDAAIRAALAAAGAFDGLV   82 (245)
T ss_pred             CEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHH----hCCeEEEecCCCHHHHHHHHHHhCCCCEEE
Confidence            6899999999999999999999999999999986533221   111    135678899999888888775   589999


Q ss_pred             EeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CC-ccEEEEeccceeeeccCCCCCCcccCCCCCCCcc
Q 039049           79 HTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KS-VKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPD  150 (305)
Q Consensus        79 ~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~-~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~  150 (305)
                      |+|+......    ..+.+...+++|+.++.++++++.+.   .+ .++||++||...+++....               
T Consensus        83 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~---------------  147 (245)
T PRK07060         83 NCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDH---------------  147 (245)
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCC---------------
Confidence            9999865321    23456667889999999999888653   12 3689999998765442211               


Q ss_pred             cccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHH
Q 039049          151 YCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHID  227 (305)
Q Consensus       151 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  227 (305)
                            ..|+.+|.+.|.+++.++.+   .+++++.+||+.++++........ ...........      ....+++++
T Consensus       148 ------~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~-~~~~~~~~~~~------~~~~~~~~~  214 (245)
T PRK07060        148 ------LAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSD-PQKSGPMLAAI------PLGRFAEVD  214 (245)
T ss_pred             ------cHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccC-HHHHHHHHhcC------CCCCCCCHH
Confidence                  56999999999999888765   379999999999998863221111 11111111111      145689999


Q ss_pred             HHHHHHHHhhccccc---CceEEEec
Q 039049          228 DVVGAHILAMEETRA---SGRLICSS  250 (305)
Q Consensus       228 D~a~~~~~~~~~~~~---~~~~~~~~  250 (305)
                      |+++++..+++.+..   +..+++.+
T Consensus       215 d~a~~~~~l~~~~~~~~~G~~~~~~~  240 (245)
T PRK07060        215 DVAAPILFLLSDAASMVSGVSLPVDG  240 (245)
T ss_pred             HHHHHHHHHcCcccCCccCcEEeECC
Confidence            999999999976532   33466654

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.90  E-value=5.4e-22  Score=164.93  Aligned_cols=223  Identities=14%  Similarity=0.056  Sum_probs=152.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++|+||||+|+||++++++|+++|++|++..|+..... ............++.++.+|+.+.+++.++++       .+
T Consensus         7 ~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   85 (252)
T PRK06077          7 KVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEM-NETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVA   85 (252)
T ss_pred             cEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHH-HHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999988876542211 11111111122356788899999888777654       57


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCCCcccCCCCCCCc
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA-KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDP  149 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~  149 (305)
                      |+|||+||......    ..+.....+++|+.++.++++++.+. ...++||++||...+.+...               
T Consensus        86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---------------  150 (252)
T PRK06077         86 DILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAYG---------------  150 (252)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCCC---------------
Confidence            99999999754432    12223567899999999999888653 12358999999876543211               


Q ss_pred             ccccccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHH
Q 039049          150 DYCKHYNLWYAYAKTIAEKEAWRIAKDC--GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHID  227 (305)
Q Consensus       150 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  227 (305)
                      .      +.|+.+|...|.+++.+++++  ++.+.+++|+.+.++....................     .....+++++
T Consensus       151 ~------~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~  219 (252)
T PRK06077        151 L------SIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKF-----TLMGKILDPE  219 (252)
T ss_pred             c------hHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHHhc-----CcCCCCCCHH
Confidence            1      679999999999999988775  68999999999987642110000000000011110     0134689999


Q ss_pred             HHHHHHHHhhccccc-CceEEEecC
Q 039049          228 DVVGAHILAMEETRA-SGRLICSSS  251 (305)
Q Consensus       228 D~a~~~~~~~~~~~~-~~~~~~~~~  251 (305)
                      |+|++++.+++.+.. ++.|++++.
T Consensus       220 dva~~~~~~~~~~~~~g~~~~i~~g  244 (252)
T PRK06077        220 EVAEFVAAILKIESITGQVFVLDSG  244 (252)
T ss_pred             HHHHHHHHHhCccccCCCeEEecCC
Confidence            999999999976544 557888643

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.90  E-value=5.4e-22  Score=163.52  Aligned_cols=207  Identities=17%  Similarity=0.160  Sum_probs=150.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++||||||+|+||+++++.|+++|++|++++|++.+.....  ....  ..+++.+.+|+.|.+++.++++       ++
T Consensus         8 k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~--~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (239)
T PRK12828          8 KVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTL--PGVP--ADALRIGGIDLVDPQAARRAVDEVNRQFGRL   83 (239)
T ss_pred             CEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHH--HHHh--hcCceEEEeecCCHHHHHHHHHHHHHHhCCc
Confidence            68999999999999999999999999999999875432211  1111  1256788899999888877765       58


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |+|||+++......    ..+.....++.|+.++.++++++.    +. +.++||++||...+.+.+.            
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~~------------  150 (239)
T PRK12828         84 DALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTAS-GGGRIVNIGAGAALKAGPG------------  150 (239)
T ss_pred             CEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhc-CCCEEEEECchHhccCCCC------------
Confidence            99999999754321    233445668899999999988874    34 6789999999876543211            


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                         .      ..|+.+|...+.+++.++.+   .++++.++||+.++++......                 .......|
T Consensus       151 ---~------~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~-----------------~~~~~~~~  204 (239)
T PRK12828        151 ---M------GAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADM-----------------PDADFSRW  204 (239)
T ss_pred             ---c------chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcC-----------------CchhhhcC
Confidence               1      55999999999888777654   4899999999999987421110                 00113347


Q ss_pred             eeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          224 VHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      ++++|+|+++.+++.+...   +..+.+.+.
T Consensus       205 ~~~~dva~~~~~~l~~~~~~~~g~~~~~~g~  235 (239)
T PRK12828        205 VTPEQIAAVIAFLLSDEAQAITGASIPVDGG  235 (239)
T ss_pred             CCHHHHHHHHHHHhCcccccccceEEEecCC
Confidence            9999999999999986532   334666543

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.89  E-value=5.8e-22  Score=162.12  Aligned_cols=206  Identities=17%  Similarity=0.153  Sum_probs=145.8

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc---CCCEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ---GVDGV   77 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~V   77 (305)
                      ||+++||||+|+||+++++.|+++ ++|++++|+..+....   ..   ...+++++++|+.|.+.+.++++   ++|+|
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~---~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~id~v   75 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDEL---AA---ELPGATPFPVDLTDPEAIAAAVEQLGRLDVL   75 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHH---HH---HhccceEEecCCCCHHHHHHHHHhcCCCCEE
Confidence            368999999999999999999999 9999999986532211   11   11257889999999999988886   58999


Q ss_pred             EEeccccccCC----CCchhhhhhhhhHHHHHH----HHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCc
Q 039049           78 FHTASPVLVPY----DNNIQATLIDPCIKGTLN----VLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDP  149 (305)
Q Consensus        78 i~~a~~~~~~~----~~~~~~~~~~~n~~~~~~----l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~  149 (305)
                      ||+++......    ..+.+...++.|+.+..+    +++.+++.  .+++|++||..++++...               
T Consensus        76 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~v~~ss~~~~~~~~~---------------  138 (227)
T PRK08219         76 VHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA--HGHVVFINSGAGLRANPG---------------  138 (227)
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCeEEEEcchHhcCcCCC---------------
Confidence            99999865321    223455568888888544    44444443  368999999876543211               


Q ss_pred             ccccccchhHHHHHHHHHHHHHHHHHHc-C-CcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHH
Q 039049          150 DYCKHYNLWYAYAKTIAEKEAWRIAKDC-G-IDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHID  227 (305)
Q Consensus       150 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~-~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  227 (305)
                      .      ..|+.+|...+.+++.++.+. + +++..++|+.+.++....       +...  .+..  .  ....+++++
T Consensus       139 ~------~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~-------~~~~--~~~~--~--~~~~~~~~~  199 (227)
T PRK08219        139 W------GSYAASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQRG-------LVAQ--EGGE--Y--DPERYLRPE  199 (227)
T ss_pred             C------chHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHhhh-------hhhh--hccc--c--CCCCCCCHH
Confidence            1      569999999999888776543 4 889999988765542110       0000  1111  1  135689999


Q ss_pred             HHHHHHHHhhcccccCceEEEe
Q 039049          228 DVVGAHILAMEETRASGRLICS  249 (305)
Q Consensus       228 D~a~~~~~~~~~~~~~~~~~~~  249 (305)
                      |++++++.+++++..+..+++.
T Consensus       200 dva~~~~~~l~~~~~~~~~~~~  221 (227)
T PRK08219        200 TVAKAVRFAVDAPPDAHITEVV  221 (227)
T ss_pred             HHHHHHHHHHcCCCCCccceEE
Confidence            9999999999987666677775

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.89  E-value=8.1e-22  Score=164.45  Aligned_cols=227  Identities=18%  Similarity=0.158  Sum_probs=157.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|+||++++++|++.|++|++++|++++..   ..........++.++++|+.+.+++.++++       ++
T Consensus         8 ~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~---~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (258)
T PRK08628          8 KVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDE---FAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI   84 (258)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHH---HHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            68999999999999999999999999999999876431   111222223468899999999998887775       57


Q ss_pred             CEEEEeccccccCC---CCchhhhhhhhhHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCCCcccCCCCCCCc
Q 039049           75 DGVFHTASPVLVPY---DNNIQATLIDPCIKGTLNVLSSCKKA--KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDP  149 (305)
Q Consensus        75 d~Vi~~a~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~  149 (305)
                      |+|||+||......   ..+.+...+++|+.++.++.+.+...  .+.++||++||...+.+.+..              
T Consensus        85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~--------------  150 (258)
T PRK08628         85 DGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQGGT--------------  150 (258)
T ss_pred             CEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCCCC--------------
Confidence            99999999654321   22556778899999999998887532  134689999997765432111              


Q ss_pred             ccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCC---chHHHHHHHHhcCCCCCCCCCccc
Q 039049          150 DYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPT---STLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       150 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                             ..|+.+|...+.+++.++.+   .+++++.++|+.++++.......   ............  ..+   ...+
T Consensus       151 -------~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~  218 (258)
T PRK08628        151 -------SGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAK--IPL---GHRM  218 (258)
T ss_pred             -------chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhc--CCc---cccC
Confidence                   56999999999999988754   48999999999999985321100   001111111111  111   1247


Q ss_pred             eeHHHHHHHHHHhhcccc--c-CceEEEecCCcCHHH
Q 039049          224 VHIDDVVGAHILAMEETR--A-SGRLICSSSVAHWSP  257 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~--~-~~~~~~~~~~~s~~e  257 (305)
                      +.++|+|+++++++....  . +..+.+.+....+++
T Consensus       219 ~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~~~~~~  255 (258)
T PRK08628        219 TTAEEIADTAVFLLSERSSHTTGQWLFVDGGYVHLDR  255 (258)
T ss_pred             CCHHHHHHHHHHHhChhhccccCceEEecCCcccccc
Confidence            889999999999997643  2 334566655444444

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.4e-21  Score=163.51  Aligned_cols=207  Identities=16%  Similarity=0.142  Sum_probs=149.9

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |++|+||||+|+||+++++.|++.|++|++++|+.......  .........++.++.+|+.|.+.+.++++       +
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~--~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   78 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASL--AQELADHGGEALVVPTDVSDAEACERLIEAAVARFGG   78 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            68899999999999999999999999999999986533221  11122223468889999999988887765       6


Q ss_pred             CCEEEEeccccccCCC-----CchhhhhhhhhHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           74 VDGVFHTASPVLVPYD-----NNIQATLIDPCIKGTLNVLSSCKKA--KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      +|+|||+|+.......     .+.....+++|+.++.++++.+...  .+.+++|++||...+.+....           
T Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-----------  147 (263)
T PRK06181         79 IDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVPTR-----------  147 (263)
T ss_pred             CCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCCCc-----------
Confidence            7999999997654321     2234567899999999999988531  134689999998765432211           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCC-CCCCCCcc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRG-EYPNTTVG  222 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  222 (305)
                                ..|+.+|.+.|.+.+.+..+   .++++++++|+.+..+........         .+... ..+....+
T Consensus       148 ----------~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~---------~~~~~~~~~~~~~~  208 (263)
T PRK06181        148 ----------SGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDG---------DGKPLGKSPMQESK  208 (263)
T ss_pred             ----------cHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhccc---------cccccccccccccC
Confidence                      56999999999998877644   489999999999887643211000         01111 11222347


Q ss_pred             ceeHHHHHHHHHHhhcc
Q 039049          223 FVHIDDVVGAHILAMEE  239 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~  239 (305)
                      +++++|+|+++..+++.
T Consensus       209 ~~~~~dva~~i~~~~~~  225 (263)
T PRK06181        209 IMSAEECAEAILPAIAR  225 (263)
T ss_pred             CCCHHHHHHHHHHHhhC
Confidence            89999999999999985

>PRK09186 flagellin modification protein A; Provisional

Probab=99.89  E-value=1.8e-21  Score=162.18  Aligned_cols=224  Identities=19%  Similarity=0.197  Sum_probs=149.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+|+||||+|+||+++++.|++.|++|+++.|++++................+.++++|+.|++++.++++       .+
T Consensus         5 k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~i   84 (256)
T PRK09186          5 KTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYGKI   84 (256)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Confidence            68999999999999999999999999999999875433221110001112356778999999998888775       37


Q ss_pred             CEEEEecccccc-------CCCCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCC
Q 039049           75 DGVFHTASPVLV-------PYDNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNE  143 (305)
Q Consensus        75 d~Vi~~a~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E  143 (305)
                      |+|||||+....       ....+.....+++|+.++..+++++.    +. +.++||++||...+.+..     .+..+
T Consensus        85 d~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~-----~~~~~  158 (256)
T PRK09186         85 DGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQ-GGGNLVNISSIYGVVAPK-----FEIYE  158 (256)
T ss_pred             cEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhc-CCceEEEEechhhhcccc-----chhcc
Confidence            999999975421       11234456678889988877666553    34 567999999976544321     11222


Q ss_pred             CCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCC
Q 039049          144 SHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTT  220 (305)
Q Consensus       144 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (305)
                      ..+....      ..|+.+|...+.+.+.++.+   .++++++++|+.++++..       ..+........+      .
T Consensus       159 ~~~~~~~------~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~-------~~~~~~~~~~~~------~  219 (256)
T PRK09186        159 GTSMTSP------VEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP-------EAFLNAYKKCCN------G  219 (256)
T ss_pred             ccccCCc------chhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC-------HHHHHHHHhcCC------c
Confidence            2222221      45999999999998877765   479999999998876531       111111111111      2


Q ss_pred             ccceeHHHHHHHHHHhhccccc--Cc-eEEEec
Q 039049          221 VGFVHIDDVVGAHILAMEETRA--SG-RLICSS  250 (305)
Q Consensus       221 ~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  250 (305)
                      ..+++++|+|++++++++....  .+ .+.+.+
T Consensus       220 ~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~  252 (256)
T PRK09186        220 KGMLDPDDICGTLVFLLSDQSKYITGQNIIVDD  252 (256)
T ss_pred             cCCCCHHHhhhhHhheeccccccccCceEEecC
Confidence            3478999999999999976432  23 345543

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.89  E-value=3.9e-21  Score=162.71  Aligned_cols=220  Identities=12%  Similarity=0.081  Sum_probs=156.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||++++++|++.|++|+++.|+....... ..........++.++.+|+.+.+.+.++++       ++
T Consensus        47 k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~i  125 (290)
T PRK06701         47 KVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANE-TKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGRL  125 (290)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHH-HHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            6899999999999999999999999999999976432111 111111223468889999999888877664       57


Q ss_pred             CEEEEeccccccC-----CCCchhhhhhhhhHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCCCcccCCCCCCC
Q 039049           75 DGVFHTASPVLVP-----YDNNIQATLIDPCIKGTLNVLSSCKKA-KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSD  148 (305)
Q Consensus        75 d~Vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~  148 (305)
                      |+|||+|+.....     ...+.+...+++|+.++.++++++... ....++|++||...+.+.+..             
T Consensus       126 D~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~~-------------  192 (290)
T PRK06701        126 DILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNETL-------------  192 (290)
T ss_pred             CEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCCc-------------
Confidence            9999999975431     123456778999999999999998653 123589999998866543221             


Q ss_pred             cccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcccee
Q 039049          149 PDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVH  225 (305)
Q Consensus       149 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  225 (305)
                              ..|+.+|.+.+.+.+.++.++   +++++.++|+.++.+......  ....+.......      ....+.+
T Consensus       193 --------~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~--~~~~~~~~~~~~------~~~~~~~  256 (290)
T PRK06701        193 --------IDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDF--DEEKVSQFGSNT------PMQRPGQ  256 (290)
T ss_pred             --------chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCccccccc--CHHHHHHHHhcC------CcCCCcC
Confidence                    459999999999999988764   899999999999987533211  111111111111      1455899


Q ss_pred             HHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          226 IDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       226 v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      ++|+|+++++++....   .+..+++.+.
T Consensus       257 ~~dva~~~~~ll~~~~~~~~G~~i~idgg  285 (290)
T PRK06701        257 PEELAPAYVFLASPDSSYITGQMLHVNGG  285 (290)
T ss_pred             HHHHHHHHHHHcCcccCCccCcEEEeCCC
Confidence            9999999999988643   2345666543

>PRK07985 oxidoreductase; Provisional

Probab=99.89  E-value=4e-21  Score=162.96  Aligned_cols=220  Identities=14%  Similarity=0.049  Sum_probs=152.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhh-ccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWE-LNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      ++++||||+|+||+++++.|++.|++|++..|+..... ...+.. ......++.++++|+.|.+++.++++       +
T Consensus        50 k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  128 (294)
T PRK07985         50 RKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEED-AQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALGG  128 (294)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhh-HHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            68999999999999999999999999998876543211 111111 11223367789999999888776654       5


Q ss_pred             CCEEEEecccccc-----CCCCchhhhhhhhhHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           74 VDGVFHTASPVLV-----PYDNNIQATLIDPCIKGTLNVLSSCKKA-KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        74 ~d~Vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      +|++||+|+....     ....+.+...+++|+.++..+++++... ....+||++||...+.+.+..            
T Consensus       129 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~~------------  196 (294)
T PRK07985        129 LDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHL------------  196 (294)
T ss_pred             CCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCCc------------
Confidence            7999999996421     1135567788999999999999988653 122589999998765432211            


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccce
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFV  224 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  224 (305)
                               ..|+.+|...+.+.+.++.+   .|+++.+++|+.+.++...... .............+      ...+.
T Consensus       197 ---------~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~-~~~~~~~~~~~~~~------~~r~~  260 (294)
T PRK07985        197 ---------LDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGG-QTQDKIPQFGQQTP------MKRAG  260 (294)
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccC-CCHHHHHHHhccCC------CCCCC
Confidence                     55999999999999888776   4899999999999998632111 11111111111111      23467


Q ss_pred             eHHHHHHHHHHhhccccc---CceEEEec
Q 039049          225 HIDDVVGAHILAMEETRA---SGRLICSS  250 (305)
Q Consensus       225 ~v~D~a~~~~~~~~~~~~---~~~~~~~~  250 (305)
                      .++|+|.++++++.....   +..+.+.+
T Consensus       261 ~pedva~~~~fL~s~~~~~itG~~i~vdg  289 (294)
T PRK07985        261 QPAELAPVYVYLASQESSYVTAEVHGVCG  289 (294)
T ss_pred             CHHHHHHHHHhhhChhcCCccccEEeeCC
Confidence            899999999999876432   33455544

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.7e-21  Score=160.34  Aligned_cols=220  Identities=15%  Similarity=0.100  Sum_probs=150.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|+||++++++|++.|++|+...++...... ...........++.++++|+.|.+++.++++       .+
T Consensus         3 ~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          3 KVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAE-AVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHH-HHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            569999999999999999999999998877644321111 1111111123357889999999988887765       57


Q ss_pred             CEEEEeccccccCC-----CCchhhhhhhhhHHHHHHHHHHHHhcC-----C-ccEEEEeccceeeeccCCCCCCcccCC
Q 039049           75 DGVFHTASPVLVPY-----DNNIQATLIDPCIKGTLNVLSSCKKAK-----S-VKRVVLTSSCSSIRYRHDAQQVSPLNE  143 (305)
Q Consensus        75 d~Vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~-----~-~~~~v~~SS~~~~~~~~~~~~~~~~~E  143 (305)
                      |+|||+|+......     ..+.+...+++|+.++.++++.+...-     + -.++|++||...+.+.+..        
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~--------  153 (248)
T PRK06123         82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGE--------  153 (248)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCC--------
Confidence            99999999764321     234556789999999999988875430     1 2369999997654432110        


Q ss_pred             CCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCC
Q 039049          144 SHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTT  220 (305)
Q Consensus       144 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (305)
                            .      ..|+.+|.+.|.+++.++.+.   +++++++||+.++++......  ....+.......+      .
T Consensus       154 ------~------~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~--~~~~~~~~~~~~p------~  213 (248)
T PRK06123        154 ------Y------IDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGG--EPGRVDRVKAGIP------M  213 (248)
T ss_pred             ------c------cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccC--CHHHHHHHHhcCC------C
Confidence                  0      349999999999999887764   899999999999998543211  1112222222211      1


Q ss_pred             ccceeHHHHHHHHHHhhcccc---cCceEEEec
Q 039049          221 VGFVHIDDVVGAHILAMEETR---ASGRLICSS  250 (305)
Q Consensus       221 ~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~  250 (305)
                      .-+.+++|+++++.+++....   .+..|++.+
T Consensus       214 ~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~g  246 (248)
T PRK06123        214 GRGGTAEEVARAILWLLSDEASYTTGTFIDVSG  246 (248)
T ss_pred             CCCcCHHHHHHHHHHHhCccccCccCCEEeecC
Confidence            223578999999999987642   244577654

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.89  E-value=6e-21  Score=158.16  Aligned_cols=219  Identities=16%  Similarity=0.167  Sum_probs=152.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++|+||||+|+||+++++.|+++|++|+++.|+...... ...........++.++.+|+.+.+.+.++++       ++
T Consensus         6 ~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   84 (248)
T PRK05557          6 KVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAE-ALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGGV   84 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHH-HHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999999887642111 1111111223468889999999988877665       57


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      |+|||+|+......    ..+.+...++.|+.++.++++.+...   .+.++||++||....++.+..            
T Consensus        85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~------------  152 (248)
T PRK05557         85 DILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQ------------  152 (248)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCC------------
Confidence            99999999765432    23345667889999999999888643   145789999997544432111            


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccce
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFV  224 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  224 (305)
                               ..|+.+|.+.+.+++.++++   .++++++++|+.+.++.....   ............+      ...+.
T Consensus       153 ---------~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~---~~~~~~~~~~~~~------~~~~~  214 (248)
T PRK05557        153 ---------ANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDAL---PEDVKEAILAQIP------LGRLG  214 (248)
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCcccccc---ChHHHHHHHhcCC------CCCCc
Confidence                     56999999999888877654   379999999998865543221   1112222222221      34478


Q ss_pred             eHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          225 HIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       225 ~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      +++|+++++..++....   .+..+++.++
T Consensus       215 ~~~~va~~~~~l~~~~~~~~~g~~~~i~~~  244 (248)
T PRK05557        215 QPEEIASAVAFLASDEAAYITGQTLHVNGG  244 (248)
T ss_pred             CHHHHHHHHHHHcCcccCCccccEEEecCC
Confidence            99999999998886522   2345777643

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.89  E-value=2.9e-21  Score=160.00  Aligned_cols=210  Identities=16%  Similarity=0.119  Sum_probs=144.3

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEE-EeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTT-VRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      |++++||||+|+||+++++.|++.|++|+++ .|+++...+.  .........++.++++|+.|.+++.++++       
T Consensus         1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~   78 (247)
T PRK09730          1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEV--VNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDE   78 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHH--HHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCC
Confidence            7899999999999999999999999999875 4544322211  11111123367889999999998888765       


Q ss_pred             CCCEEEEeccccccCC-----CCchhhhhhhhhHHHHHHHHHHHHhc------CCccEEEEeccceeeeccCCCCCCccc
Q 039049           73 GVDGVFHTASPVLVPY-----DNNIQATLIDPCIKGTLNVLSSCKKA------KSVKRVVLTSSCSSIRYRHDAQQVSPL  141 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~v~~SS~~~~~~~~~~~~~~~~  141 (305)
                      ++|+|||+|+......     ..+.....+++|+.++.++++.+...      ...++||++||...+.+.+.       
T Consensus        79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~-------  151 (247)
T PRK09730         79 PLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPG-------  151 (247)
T ss_pred             CCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCC-------
Confidence            4689999999753321     23345678999999998887765432      01346999999865543211       


Q ss_pred             CCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCC
Q 039049          142 NESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPN  218 (305)
Q Consensus       142 ~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (305)
                             ..      ..|+.+|...+.+++.++.+   .+++++++||+.+|++...... . ...........+     
T Consensus       152 -------~~------~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~-~-~~~~~~~~~~~~-----  211 (247)
T PRK09730        152 -------EY------VDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGG-E-PGRVDRVKSNIP-----  211 (247)
T ss_pred             -------cc------cchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCC-C-HHHHHHHHhcCC-----
Confidence                   00      34999999999998877654   4899999999999999643221 1 112222222222     


Q ss_pred             CCccceeHHHHHHHHHHhhccc
Q 039049          219 TTVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       219 ~~~~~i~v~D~a~~~~~~~~~~  240 (305)
                       .....+++|+++++++++...
T Consensus       212 -~~~~~~~~dva~~~~~~~~~~  232 (247)
T PRK09730        212 -MQRGGQPEEVAQAIVWLLSDK  232 (247)
T ss_pred             -CCCCcCHHHHHHHHHhhcChh
Confidence             112347899999999998754

>PRK05717 oxidoreductase; Validated

Probab=99.89  E-value=3.8e-21  Score=160.13  Aligned_cols=216  Identities=15%  Similarity=0.087  Sum_probs=151.3

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      +|+++||||+|+||+++++.|++.|++|+++.|+..+....   ...  ...++.++++|+.+.+++.++++       +
T Consensus        10 ~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~---~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   84 (255)
T PRK05717         10 GRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKV---AKA--LGENAWFIAMDVADEAQVAAGVAEVLGQFGR   84 (255)
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH---HHH--cCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            36899999999999999999999999999998876432221   111  12367889999999887766543       4


Q ss_pred             CCEEEEeccccccC------CCCchhhhhhhhhHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVP------YDNNIQATLIDPCIKGTLNVLSSCKKA--KSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|+|||+||.....      ...+.+...+++|+.++.++++++...  ....++|++||...+.+.+..          
T Consensus        85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~~----------  154 (255)
T PRK05717         85 LDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPDT----------  154 (255)
T ss_pred             CCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCCC----------
Confidence            79999999976432      133456678999999999999998632  123589999998754432111          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC--GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                                 ..|+.+|.+.+.+++.++.++  ++++++++|+.+.++......  ... +.......   .+  ...+
T Consensus       155 -----------~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~--~~~-~~~~~~~~---~~--~~~~  215 (255)
T PRK05717        155 -----------EAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRR--AEP-LSEADHAQ---HP--AGRV  215 (255)
T ss_pred             -----------cchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCcccccc--chH-HHHHHhhc---CC--CCCC
Confidence                       559999999999999988775  589999999999987532211  111 11111111   11  2346


Q ss_pred             eeHHHHHHHHHHhhccccc---CceEEEec
Q 039049          224 VHIDDVVGAHILAMEETRA---SGRLICSS  250 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~~---~~~~~~~~  250 (305)
                      .+++|++.++..+++....   +..+.+.+
T Consensus       216 ~~~~~va~~~~~l~~~~~~~~~g~~~~~~g  245 (255)
T PRK05717        216 GTVEDVAAMVAWLLSRQAGFVTGQEFVVDG  245 (255)
T ss_pred             cCHHHHHHHHHHHcCchhcCccCcEEEECC
Confidence            7999999999998865422   33455543

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.2e-21  Score=163.34  Aligned_cols=196  Identities=18%  Similarity=0.207  Sum_probs=144.8

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      ||+|+||||+|+||+++++.|+++|++|++++|+.+.......  .... ..++.++++|+.|.+++.++++       .
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~--~~~~-~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~   78 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAA--RLPK-AARVSVYAADVRDADALAAAAADFIAAHGL   78 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--hccc-CCeeEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            4789999999999999999999999999999998654322211  1111 1268899999999988877664       3


Q ss_pred             CCEEEEeccccccCC-----CCchhhhhhhhhHHHHHHHHHH----HHhcCCccEEEEeccceeeeccCCCCCCcccCCC
Q 039049           74 VDGVFHTASPVLVPY-----DNNIQATLIDPCIKGTLNVLSS----CKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNES  144 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~  144 (305)
                      +|++||+||......     ..+.+...+++|+.++.++++.    +++. +.++||++||...+.+.+..         
T Consensus        79 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~-~~~~iv~isS~~~~~~~~~~---------  148 (257)
T PRK07024         79 PDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAA-RRGTLVGIASVAGVRGLPGA---------  148 (257)
T ss_pred             CCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhc-CCCEEEEEechhhcCCCCCC---------
Confidence            799999999764321     2345677899999999998874    4445 56799999997755432211         


Q ss_pred             CCCCcccccccchhHHHHHHHHHHHHHHHHH---HcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCc
Q 039049          145 HWSDPDYCKHYNLWYAYAKTIAEKEAWRIAK---DCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTV  221 (305)
Q Consensus       145 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (305)
                                  ..|+.+|.+.+.+.+.+..   .++++++++||+.+.++.....             .    .+  ..
T Consensus       149 ------------~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-------------~----~~--~~  197 (257)
T PRK07024        149 ------------GAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHN-------------P----YP--MP  197 (257)
T ss_pred             ------------cchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcC-------------C----CC--CC
Confidence                        5599999999999887764   3589999999999987742110             0    00  11


Q ss_pred             cceeHHHHHHHHHHhhccc
Q 039049          222 GFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~  240 (305)
                      .++..+|+++.++.++++.
T Consensus       198 ~~~~~~~~a~~~~~~l~~~  216 (257)
T PRK07024        198 FLMDADRFAARAARAIARG  216 (257)
T ss_pred             CccCHHHHHHHHHHHHhCC
Confidence            2368999999999999864

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.89  E-value=7.2e-21  Score=156.40  Aligned_cols=207  Identities=17%  Similarity=0.105  Sum_probs=147.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc------CCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ------GVD   75 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------~~d   75 (305)
                      |+|+||||+|+||+++++.|+++|++|+++.|+.....             ..+++++|+.|.+++.++++      ++|
T Consensus         4 k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~~-------------~~~~~~~D~~~~~~~~~~~~~~~~~~~~d   70 (234)
T PRK07577          4 RTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDDF-------------PGELFACDLADIEQTAATLAQINEIHPVD   70 (234)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccccc-------------CceEEEeeCCCHHHHHHHHHHHHHhCCCc
Confidence            68999999999999999999999999999999865310             12578899999988877665      579


Q ss_pred             EEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           76 GVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        76 ~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      +|||+|+......    ..+.+...+++|+.++.++.+.+.    +. +.+++|++||...++.. .             
T Consensus        71 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~~~-~-------------  135 (234)
T PRK07577         71 AIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLR-EQGRIVNICSRAIFGAL-D-------------  135 (234)
T ss_pred             EEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEccccccCCC-C-------------
Confidence            9999999866432    234556678899999888877653    34 56799999998643221 1             


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccce
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFV  224 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  224 (305)
                        .      ..|+.+|...|.+++.++.+   .+++++++||+.+..+....................+      .....
T Consensus       136 --~------~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~  201 (234)
T PRK07577        136 --R------TSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIP------MRRLG  201 (234)
T ss_pred             --c------hHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCC------CCCCc
Confidence              0      66999999999998887654   4899999999999877532111111111112221111      22246


Q ss_pred             eHHHHHHHHHHhhccccc---CceEEEec
Q 039049          225 HIDDVVGAHILAMEETRA---SGRLICSS  250 (305)
Q Consensus       225 ~v~D~a~~~~~~~~~~~~---~~~~~~~~  250 (305)
                      ..+|++.+++.++..+..   +..+.+.+
T Consensus       202 ~~~~~a~~~~~l~~~~~~~~~g~~~~~~g  230 (234)
T PRK07577        202 TPEEVAAAIAFLLSDDAGFITGQVLGVDG  230 (234)
T ss_pred             CHHHHHHHHHHHhCcccCCccceEEEecC
Confidence            889999999999976532   33455543

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.88  E-value=3.6e-21  Score=159.66  Aligned_cols=207  Identities=19%  Similarity=0.179  Sum_probs=145.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|+||+++++.|+++|++|++++|+.+.....   ...  ...++.++++|+.|.+++.++++       ++
T Consensus         7 k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~---~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (249)
T PRK06500          7 KTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAA---RAE--LGESALVIRADAGDVAAQKALAQALAEAFGRL   81 (249)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHH---HHH--hCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            6899999999999999999999999999999875432211   111  12367889999999877665543       67


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCCCcccCCCCCCCc
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA-KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDP  149 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~  149 (305)
                      |+|||+|+......    ..+.+...+++|+.++.++++++... ....++|++||....++.+.               
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~~---------------  146 (249)
T PRK06500         82 DAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMPN---------------  146 (249)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCCC---------------
Confidence            99999999765322    34566778999999999999999742 12257888777554332211               


Q ss_pred             ccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCC---CCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          150 DYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQ---PTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       150 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                      .      ..|+.+|.+.|.+++.++.+.   +++++++||+.++++.....   ......+........+      ..-+
T Consensus       147 ~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~  214 (249)
T PRK06500        147 S------SVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVP------LGRF  214 (249)
T ss_pred             c------cHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCC------CCCC
Confidence            1      669999999999998887654   89999999999998843211   0111112222222221      2235


Q ss_pred             eeHHHHHHHHHHhhccc
Q 039049          224 VHIDDVVGAHILAMEET  240 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~  240 (305)
                      ..++|+++++.+++...
T Consensus       215 ~~~~~va~~~~~l~~~~  231 (249)
T PRK06500        215 GTPEEIAKAVLYLASDE  231 (249)
T ss_pred             cCHHHHHHHHHHHcCcc
Confidence            68999999999998754

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.88  E-value=3.5e-21  Score=160.09  Aligned_cols=201  Identities=12%  Similarity=0.055  Sum_probs=147.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|+++.|+..           .....++.++++|+.+.+.+.++++       ++
T Consensus         9 k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~-----------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   77 (252)
T PRK08220          9 KTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFL-----------TQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPL   77 (252)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchh-----------hhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            67999999999999999999999999999998761           0112367899999999988888765       47


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      |+|||+|+......    ..+.+...+++|+.++.++++++...   .+.++||++||.....+...             
T Consensus        78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~-------------  144 (252)
T PRK08220         78 DVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIG-------------  144 (252)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCC-------------
Confidence            99999999865432    34466778999999999999887532   14568999999764322111             


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCch---HHH----HHHHHhcCCCCCC
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTST---LLL----ILAMVKGLRGEYP  217 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~---~~~----~~~~~~~~~~~~~  217 (305)
                        .      ..|+.+|...+.+++.++.+   +++++++++|+.++++.........   ...    ......+      
T Consensus       145 --~------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~------  210 (252)
T PRK08220        145 --M------AAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLG------  210 (252)
T ss_pred             --C------chhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhc------
Confidence              1      56999999999999888766   6899999999999998532110000   000    0111111      


Q ss_pred             CCCccceeHHHHHHHHHHhhccc
Q 039049          218 NTTVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       218 ~~~~~~i~v~D~a~~~~~~~~~~  240 (305)
                      .....+++++|+|+++++++...
T Consensus       211 ~~~~~~~~~~dva~~~~~l~~~~  233 (252)
T PRK08220        211 IPLGKIARPQEIANAVLFLASDL  233 (252)
T ss_pred             CCCcccCCHHHHHHHHHHHhcch
Confidence            11456899999999999998653

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.7e-21  Score=162.46  Aligned_cols=213  Identities=16%  Similarity=0.088  Sum_probs=143.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-CCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-GVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-~~d~Vi~~   80 (305)
                      ++||||||+|+||+++++.|++.|++|++++|++.+.........  ....++.++++|+.|++.+.+++. ++|+||||
T Consensus         3 ~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~   80 (257)
T PRK09291          3 KTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAA--RRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNN   80 (257)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--hcCCcceEEEeeCCCHHHHHHHhcCCCCEEEEC
Confidence            679999999999999999999999999999998654332221111  113368899999999999998887 89999999


Q ss_pred             ccccccCC----CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccc
Q 039049           81 ASPVLVPY----DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYC  152 (305)
Q Consensus        81 a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~  152 (305)
                      |+......    ..+.....+++|+.++.++.+.+    ++. +.++||++||...+...+.               .  
T Consensus        81 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~SS~~~~~~~~~---------------~--  142 (257)
T PRK09291         81 AGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVAR-GKGKVVFTSSMAGLITGPF---------------T--  142 (257)
T ss_pred             CCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEEcChhhccCCCC---------------c--
Confidence            99765332    23345567888998887766543    444 5689999999754322111               1  


Q ss_pred             cccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCC--CCCCccceeHH
Q 039049          153 KHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEY--PNTTVGFVHID  227 (305)
Q Consensus       153 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~  227 (305)
                          ..|+.+|...|.+.+.+..+   .+++++++||+.+..+...........+...  .......  ......++..+
T Consensus       143 ----~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  216 (257)
T PRK09291        143 ----GAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDP--ARNFTDPEDLAFPLEQFDPQ  216 (257)
T ss_pred             ----chhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcch--hhHHHhhhhhhccccCCCHH
Confidence                56999999999988776654   5899999999987543211100000000000  0000001  11134567889


Q ss_pred             HHHHHHHHhhccc
Q 039049          228 DVVGAHILAMEET  240 (305)
Q Consensus       228 D~a~~~~~~~~~~  240 (305)
                      |++..++.++..+
T Consensus       217 ~~~~~~~~~l~~~  229 (257)
T PRK09291        217 EMIDAMVEVIPAD  229 (257)
T ss_pred             HHHHHHHHHhcCC
Confidence            9988888887654

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.88  E-value=7.5e-21  Score=157.70  Aligned_cols=209  Identities=13%  Similarity=0.100  Sum_probs=149.8

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      +++|+||||+|+||++++++|++.|++|+++.|+... .....+.   ....++.++++|+.+.+++.++++       +
T Consensus         5 ~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~-~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (248)
T TIGR01832         5 GKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPS-ETQQQVE---ALGRRFLSLTADLSDIEAIKALVDSAVEEFGH   80 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHH-HHHHHHH---hcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            3789999999999999999999999999999986521 1111111   113368899999999988876654       5


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CC-ccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KS-VKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~-~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|+|||+||......    ..+.+...+++|+.++.++++++...   .+ .+++|++||...+.+....          
T Consensus        81 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~----------  150 (248)
T TIGR01832        81 IDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRV----------  150 (248)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCC----------
Confidence            899999999865432    23456678899999999999887532   12 4689999998765432111          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                                 ..|+.+|.+.+.+++.++.+.   ++++++++|+.+..+........ ..........    .+  ...
T Consensus       151 -----------~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~----~~--~~~  212 (248)
T TIGR01832       151 -----------PSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRAD-EDRNAAILER----IP--AGR  212 (248)
T ss_pred             -----------chhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccC-hHHHHHHHhc----CC--CCC
Confidence                       459999999999999998774   89999999999987753211111 1111111111    11  346


Q ss_pred             ceeHHHHHHHHHHhhcccc
Q 039049          223 FVHIDDVVGAHILAMEETR  241 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~  241 (305)
                      ++.++|+|+++++++....
T Consensus       213 ~~~~~dva~~~~~l~s~~~  231 (248)
T TIGR01832       213 WGTPDDIGGPAVFLASSAS  231 (248)
T ss_pred             CcCHHHHHHHHHHHcCccc
Confidence            8999999999999997543

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.5e-21  Score=163.05  Aligned_cols=216  Identities=18%  Similarity=0.139  Sum_probs=146.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--------~   73 (305)
                      ++|+||||+|+||+++++.|+++|++|++++|+++.....   .     ..+++++.+|+.|.+++.++++        .
T Consensus         5 k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l---~-----~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~   76 (277)
T PRK05993          5 RSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAAL---E-----AEGLEAFQLDYAEPESIAALVAQVLELSGGR   76 (277)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH---H-----HCCceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5799999999999999999999999999999987543221   1     1257889999999887776654        4


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHH----HHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKG----TLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~----~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|+||||||......    ..+.....+++|+.+    +..++..+++. +.++||++||...+.+.+.           
T Consensus        77 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~-~~g~iv~isS~~~~~~~~~-----------  144 (277)
T PRK05993         77 LDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ-GQGRIVQCSSILGLVPMKY-----------  144 (277)
T ss_pred             ccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc-CCCEEEEECChhhcCCCCc-----------
Confidence            799999999765432    233456688999999    55566666666 6789999999754322111           


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHH---HcCCcEEEEecCceecCCCCCCCCchHH-----------HHHHHHhc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAK---DCGIDMVVVNPSFVVGPLLAPQPTSTLL-----------LILAMVKG  211 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~i~Rp~~v~G~~~~~~~~~~~~-----------~~~~~~~~  211 (305)
                          .      ..|+.||.+.|.+.+.+..   ..|+++++++||.+-.+...........           ........
T Consensus       145 ----~------~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (277)
T PRK05993        145 ----R------GAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMAR  214 (277)
T ss_pred             ----c------chHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHH
Confidence                1      5699999999999887763   3589999999999876642211000000           00000000


Q ss_pred             CCCCCCCCCccceeHHHHHHHHHHhhcccccCceEEE
Q 039049          212 LRGEYPNTTVGFVHIDDVVGAHILAMEETRASGRLIC  248 (305)
Q Consensus       212 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~  248 (305)
                      .... .......+..+++|+.++.+++++.....|.+
T Consensus       215 ~~~~-~~~~~~~~~~~~va~~i~~a~~~~~~~~~~~~  250 (277)
T PRK05993        215 LEGG-GSKSRFKLGPEAVYAVLLHALTAPRPRPHYRV  250 (277)
T ss_pred             HHhh-hhccccCCCHHHHHHHHHHHHcCCCCCCeeee
Confidence            0000 00011236789999999999987655444544

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.88  E-value=7.4e-21  Score=158.66  Aligned_cols=216  Identities=13%  Similarity=0.074  Sum_probs=149.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|++.|++|+++.+....... ...........++.++++|+.|.+++.++++       ++
T Consensus        10 k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~i   88 (258)
T PRK09134         10 RAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAE-ALAAEIRALGRRAVALQADLADEAEVRALVARASAALGPI   88 (258)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHH-HHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            579999999999999999999999999888775322111 1111111123468889999999988887764       47


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhcC---CccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKAK---SVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      |+||||||......    ..+.+...+++|+.++.++++.+....   .-+++|++||...+...+.             
T Consensus        89 D~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~-------------  155 (258)
T PRK09134         89 TLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPD-------------  155 (258)
T ss_pred             CEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCC-------------
Confidence            99999999754321    344667789999999999999876531   2357888887543322111             


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcccee
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKDC--GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVH  225 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  225 (305)
                              ...|+.+|...|.+.+.+++++  .++++.++|+.+......    .. ..+.......+      .....+
T Consensus       156 --------~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~----~~-~~~~~~~~~~~------~~~~~~  216 (258)
T PRK09134        156 --------FLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQ----SP-EDFARQHAATP------LGRGST  216 (258)
T ss_pred             --------chHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCccc----Ch-HHHHHHHhcCC------CCCCcC
Confidence                    0469999999999999988765  489999999988764321    11 11122222211      123478


Q ss_pred             HHHHHHHHHHhhcccccCc-eEEEec
Q 039049          226 IDDVVGAHILAMEETRASG-RLICSS  250 (305)
Q Consensus       226 v~D~a~~~~~~~~~~~~~~-~~~~~~  250 (305)
                      ++|+|++++.+++.+...+ .+++.+
T Consensus       217 ~~d~a~~~~~~~~~~~~~g~~~~i~g  242 (258)
T PRK09134        217 PEEIAAAVRYLLDAPSVTGQMIAVDG  242 (258)
T ss_pred             HHHHHHHHHHHhcCCCcCCCEEEECC
Confidence            9999999999998765544 566654

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.88  E-value=7.5e-21  Score=157.85  Aligned_cols=218  Identities=19%  Similarity=0.192  Sum_probs=154.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|+||+++++.|+++|++|++++|++++.....  ........++.++++|+.|.+++.++++       ++
T Consensus         8 ~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   85 (250)
T PRK12939          8 KRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELA--AALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL   85 (250)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH--HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            67999999999999999999999999999988765333221  1112223468899999999998887764       58


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      |+|||+|+......    ..+.....++.|+.++.++++.+...   .+..+||++||...+.+....            
T Consensus        86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------------  153 (250)
T PRK12939         86 DGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKL------------  153 (250)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCc------------
Confidence            99999999765422    23445667889999999999887543   134599999997654432111            


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccce
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFV  224 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  224 (305)
                               ..|+.+|...|.+++.++.+   .+++++.++|+.+..+.......  ..+......+.      ....++
T Consensus       154 ---------~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~------~~~~~~  216 (250)
T PRK12939        154 ---------GAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPA--DERHAYYLKGR------ALERLQ  216 (250)
T ss_pred             ---------chHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCC--hHHHHHHHhcC------CCCCCC
Confidence                     45999999999999887655   47999999999987775322111  01112222221      145689


Q ss_pred             eHHHHHHHHHHhhcccc---cCceEEEec
Q 039049          225 HIDDVVGAHILAMEETR---ASGRLICSS  250 (305)
Q Consensus       225 ~v~D~a~~~~~~~~~~~---~~~~~~~~~  250 (305)
                      +++|++++++.++....   .+..+.+.+
T Consensus       217 ~~~dva~~~~~l~~~~~~~~~G~~i~~~g  245 (250)
T PRK12939        217 VPDDVAGAVLFLLSDAARFVTGQLLPVNG  245 (250)
T ss_pred             CHHHHHHHHHHHhCccccCccCcEEEECC
Confidence            99999999999997643   233455654

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.88  E-value=4.9e-21  Score=164.77  Aligned_cols=190  Identities=14%  Similarity=0.106  Sum_probs=130.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|+||.++++.|+++|++|++++|+.++......  .......++.++++|+.|.+++.++++       ++
T Consensus         7 k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~--~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   84 (322)
T PRK07453          7 GTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQ--ELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL   84 (322)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--HhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence            579999999999999999999999999999998654332211  111113368899999999988887764       48


Q ss_pred             CEEEEeccccccC-----CCCchhhhhhhhhHHHHHHHHHHHHhc---CC--ccEEEEeccceeeeccCCCCCCcc--cC
Q 039049           75 DGVFHTASPVLVP-----YDNNIQATLIDPCIKGTLNVLSSCKKA---KS--VKRVVLTSSCSSIRYRHDAQQVSP--LN  142 (305)
Q Consensus        75 d~Vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~--~~~~v~~SS~~~~~~~~~~~~~~~--~~  142 (305)
                      |+|||+||.....     ...+.+...+++|+.++.++++++...   .+  ..|||++||...++.........+  ..
T Consensus        85 D~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~~  164 (322)
T PRK07453         85 DALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPAD  164 (322)
T ss_pred             cEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCccc
Confidence            9999999975431     134567788999999999998887542   12  359999999876542111000000  01


Q ss_pred             CCC-------CCCc-----ccccccchhHHHHHHHHHHHHHHHHHHc----CCcEEEEecCceecCC
Q 039049          143 ESH-------WSDP-----DYCKHYNLWYAYAKTIAEKEAWRIAKDC----GIDMVVVNPSFVVGPL  193 (305)
Q Consensus       143 E~~-------~~~~-----~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~i~Rp~~v~G~~  193 (305)
                      .++       +..|     ..+..+...|+.||.+.+.+.+.+++++    +++++.+|||.|++..
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~  231 (322)
T PRK07453        165 LGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTP  231 (322)
T ss_pred             hhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCc
Confidence            000       0000     0001112679999999988888877664    7999999999998654

>PLN02253 xanthoxin dehydrogenase

Probab=99.88  E-value=4.3e-21  Score=162.00  Aligned_cols=221  Identities=18%  Similarity=0.136  Sum_probs=151.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||++++++|++.|++|+++.|+.....+..  ... ....++.++++|+.|.+++.++++       ++
T Consensus        19 k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~i   95 (280)
T PLN02253         19 KVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVC--DSL-GGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTL   95 (280)
T ss_pred             CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH--HHh-cCCCceEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            67999999999999999999999999999998754332211  111 112468899999999988887775       68


Q ss_pred             CEEEEeccccccC------CCCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           75 DGVFHTASPVLVP------YDNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        75 d~Vi~~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      |+|||+||.....      ...+.+...+++|+.++.++++++...   .+..++|++||.....+....          
T Consensus        96 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~----------  165 (280)
T PLN02253         96 DIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGP----------  165 (280)
T ss_pred             CEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCC----------
Confidence            9999999975421      124556778999999999998877532   133579999887643321110          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCC---chHHHHH---HHHhcCCCCC
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPT---STLLLIL---AMVKGLRGEY  216 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~---~~~~~~~---~~~~~~~~~~  216 (305)
                                 ..|+.+|.+.|.+.+.++.+.   ++++..++|+.+.++.......   .....+.   ........ +
T Consensus       166 -----------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l  233 (280)
T PLN02253        166 -----------HAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNAN-L  233 (280)
T ss_pred             -----------cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCC-C
Confidence                       459999999999999887764   7999999999998764221110   0001111   11111100 0


Q ss_pred             CCCCccceeHHHHHHHHHHhhccccc---CceEEEec
Q 039049          217 PNTTVGFVHIDDVVGAHILAMEETRA---SGRLICSS  250 (305)
Q Consensus       217 ~~~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~  250 (305)
                         ....++++|+++++.+++.....   +..+++.|
T Consensus       234 ---~~~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdg  267 (280)
T PLN02253        234 ---KGVELTVDDVANAVLFLASDEARYISGLNLMIDG  267 (280)
T ss_pred             ---cCCCCCHHHHHHHHHhhcCcccccccCcEEEECC
Confidence               12357899999999999875432   34466654

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.88  E-value=4.5e-21  Score=158.20  Aligned_cols=194  Identities=18%  Similarity=0.156  Sum_probs=144.8

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcC----CCE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQG----VDG   76 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~----~d~   76 (305)
                      |++++||||+|+||+++++.|+++|++|++++|+++......      ....++.++++|+.|.+++.+++++    +|.
T Consensus         1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~   74 (240)
T PRK06101          1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELH------TQSANIFTLAFDVTDHPGTKAALSQLPFIPEL   74 (240)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH------HhcCCCeEEEeeCCCHHHHHHHHHhcccCCCE
Confidence            789999999999999999999999999999999865332211      1123678899999999999988764    589


Q ss_pred             EEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCCCcccCCCCCCCccc
Q 039049           77 VFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA-KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDY  151 (305)
Q Consensus        77 Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~  151 (305)
                      +||+||......    ..+.....+++|+.++.++++++... ...+++|++||.....+.+..                
T Consensus        75 ~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~----------------  138 (240)
T PRK06101         75 WIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALPRA----------------  138 (240)
T ss_pred             EEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCCCC----------------
Confidence            999998643211    23345678999999999999998753 123579999886533321110                


Q ss_pred             ccccchhHHHHHHHHHHHHHHHHH---HcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHH
Q 039049          152 CKHYNLWYAYAKTIAEKEAWRIAK---DCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDD  228 (305)
Q Consensus       152 ~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  228 (305)
                           ..|+.+|...+.+.+.++.   ..+++++++||+.++++......               ..    ....+..+|
T Consensus       139 -----~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~---------------~~----~~~~~~~~~  194 (240)
T PRK06101        139 -----EAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKNT---------------FA----MPMIITVEQ  194 (240)
T ss_pred             -----chhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCC---------------CC----CCcccCHHH
Confidence                 5699999999999887764   45899999999999987532110               00    112478999


Q ss_pred             HHHHHHHhhccc
Q 039049          229 VVGAHILAMEET  240 (305)
Q Consensus       229 ~a~~~~~~~~~~  240 (305)
                      +++.+...++..
T Consensus       195 ~a~~i~~~i~~~  206 (240)
T PRK06101        195 ASQEIRAQLARG  206 (240)
T ss_pred             HHHHHHHHHhcC
Confidence            999999999874

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.88  E-value=7e-21  Score=157.84  Aligned_cols=203  Identities=16%  Similarity=0.133  Sum_probs=144.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+|+||||+|+||.++++.|++.|++|++++|++.+....   ....  ..++.++.+|+.|.+++.++++       ++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~---~~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i   75 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQEL---KDEL--GDNLYIAQLDVRNRAAIEEMLASLPAEWRNI   75 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHH---HHHh--ccceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            5799999999999999999999999999999986533221   1111  2367899999999988877664       68


Q ss_pred             CEEEEecccccc-----CCCCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           75 DGVFHTASPVLV-----PYDNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        75 d~Vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      |+|||+||....     ..+.+.+...+++|+.++..+++.+.    +. +.+++|++||.....+...           
T Consensus        76 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~-----------  143 (248)
T PRK10538         76 DVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER-NHGHIINIGSTAGSWPYAG-----------  143 (248)
T ss_pred             CEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEECCcccCCCCCC-----------
Confidence            999999997431     11345667789999999777666653    44 6679999999764322111           


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCC-CCchHHHHHHHHhcCCCCCCCCCc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQ-PTSTLLLILAMVKGLRGEYPNTTV  221 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  221 (305)
                          .      ..|+.+|...+.+.+.++.+.   ++++.+++||.+.|+..... ............        . ..
T Consensus       144 ----~------~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~~--------~-~~  204 (248)
T PRK10538        144 ----G------NVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTY--------Q-NT  204 (248)
T ss_pred             ----C------chhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHhhc--------c-cc
Confidence                1      569999999999998887654   79999999999987643211 000000000000        0 12


Q ss_pred             cceeHHHHHHHHHHhhccc
Q 039049          222 GFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~  240 (305)
                      .++.++|+|++++.++..+
T Consensus       205 ~~~~~~dvA~~~~~l~~~~  223 (248)
T PRK10538        205 VALTPEDVSEAVWWVATLP  223 (248)
T ss_pred             CCCCHHHHHHHHHHHhcCC
Confidence            3578999999999998755

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.88  E-value=6.4e-21  Score=157.40  Aligned_cols=203  Identities=14%  Similarity=0.109  Sum_probs=147.8

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |++++||||+|+||+++++.|+++|++|++++|++++.......  ......++.++++|+.|.+.+.++++       +
T Consensus         6 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (241)
T PRK07454          6 MPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAE--LRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC   83 (241)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH--HHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999986543222111  11123468899999999988777665       4


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|+|||+||......    ..+.....+++|+.++.++++.+    .+. +.+++|++||...+.+....          
T Consensus        84 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~~----------  152 (241)
T PRK07454         84 PDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRAR-GGGLIINVSSIAARNAFPQW----------  152 (241)
T ss_pred             CCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-CCcEEEEEccHHhCcCCCCc----------
Confidence            899999999765322    23456677899999988888776    333 55789999998765432111          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                                 ..|+.+|.+.+.+.+.++++   .+++++++||+.+-.+...... .     ..       ...  ...
T Consensus       153 -----------~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~-~-----~~-------~~~--~~~  206 (241)
T PRK07454        153 -----------GAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTET-V-----QA-------DFD--RSA  206 (241)
T ss_pred             -----------cHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccccc-c-----cc-------ccc--ccc
Confidence                       56999999999988877644   4899999999998776422100 0     00       000  123


Q ss_pred             ceeHHHHHHHHHHhhccccc
Q 039049          223 FVHIDDVVGAHILAMEETRA  242 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~~  242 (305)
                      .+..+|+|++++.++.++..
T Consensus       207 ~~~~~~va~~~~~l~~~~~~  226 (241)
T PRK07454        207 MLSPEQVAQTILHLAQLPPS  226 (241)
T ss_pred             CCCHHHHHHHHHHHHcCCcc
Confidence            57899999999999987744

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.88  E-value=8e-21  Score=159.52  Aligned_cols=208  Identities=15%  Similarity=0.065  Sum_probs=147.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+|+||||+|+||+++++.|+++|++|++++|+.+......  ......+.++.++++|+.|.+++.++++       ++
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~--~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   78 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETL--KLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGI   78 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999865433211  1112224468889999999888877664       68


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |+|||+||......    ..+.....+++|+.++.++.+.+    ++. +.++||++||...+.+.+..           
T Consensus        79 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~~~~~~~~-----------  146 (270)
T PRK05650         79 DVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQ-KSGRIVNIASMAGLMQGPAM-----------  146 (270)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC-CCCEEEEECChhhcCCCCCc-----------
Confidence            99999999865432    22345557889988888766664    455 66799999998654432211           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                                ..|+.+|.+.+.+.+.+..+.   ++++++++|+.+.++............. .......      ...+
T Consensus       147 ----------~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~-~~~~~~~------~~~~  209 (270)
T PRK05650        147 ----------SSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMK-AQVGKLL------EKSP  209 (270)
T ss_pred             ----------hHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHH-HHHHHHh------hcCC
Confidence                      569999999998888877663   8999999999998875432211111111 1110000      1235


Q ss_pred             eeHHHHHHHHHHhhccc
Q 039049          224 VHIDDVVGAHILAMEET  240 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~  240 (305)
                      ++++|+|+.++.++++.
T Consensus       210 ~~~~~vA~~i~~~l~~~  226 (270)
T PRK05650        210 ITAADIADYIYQQVAKG  226 (270)
T ss_pred             CCHHHHHHHHHHHHhCC
Confidence            89999999999999864

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.88  E-value=5e-21  Score=159.87  Aligned_cols=204  Identities=20%  Similarity=0.142  Sum_probs=146.7

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--------
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--------   72 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--------   72 (305)
                      ||+++||||+|+||+++++.|+++|++|++++|+.+...+....  ..  ..++.++++|+.|.+++.++++        
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~--~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   76 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAE--LG--AGNAWTGALDVTDRAAWDAALADFAAATGG   76 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH--hc--CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            88999999999999999999999999999999987543322111  11  3368899999999888877654        


Q ss_pred             CCCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           73 GVDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      ++|+||||||......    ..+.....+++|+.++.++++++...   .+..++|++||....++....          
T Consensus        77 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~----------  146 (260)
T PRK08267         77 RLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGL----------  146 (260)
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCc----------
Confidence            4699999999865432    23456778999999999998887431   145789999997654432211          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                                 ..|+.+|...+.+.+.++.+   .++++++++|+.+..+........   ........        ..-
T Consensus       147 -----------~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~---~~~~~~~~--------~~~  204 (260)
T PRK08267        147 -----------AVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNE---VDAGSTKR--------LGV  204 (260)
T ss_pred             -----------hhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccch---hhhhhHhh--------ccC
Confidence                       56999999999998888755   379999999999876543210000   00000000        111


Q ss_pred             ceeHHHHHHHHHHhhccc
Q 039049          223 FVHIDDVVGAHILAMEET  240 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~  240 (305)
                      .+..+|++++++.+++..
T Consensus       205 ~~~~~~va~~~~~~~~~~  222 (260)
T PRK08267        205 RLTPEDVAEAVWAAVQHP  222 (260)
T ss_pred             CCCHHHHHHHHHHHHhCC
Confidence            366799999999999754

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.88  E-value=4e-21  Score=158.81  Aligned_cols=199  Identities=19%  Similarity=0.181  Sum_probs=145.7

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc----CCCE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ----GVDG   76 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----~~d~   76 (305)
                      ||+|+||||+|+||.++++.|+++|++|++++|++++......... .....++.++++|+.|.+++.++++    ++|+
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~   79 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLR-ARGAVAVSTHELDILDTASHAAFLDSLPALPDI   79 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHH-HhcCCeEEEEecCCCChHHHHHHHHHHhhcCCE
Confidence            8999999999999999999999999999999998754332111101 1113478999999999988887765    4699


Q ss_pred             EEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCCCCc
Q 039049           77 VFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDP  149 (305)
Q Consensus        77 Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~  149 (305)
                      |||+||......    +.+.....+++|+.++.++++.+...   .+.++||++||.....+...               
T Consensus        80 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---------------  144 (243)
T PRK07102         80 VLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRAS---------------  144 (243)
T ss_pred             EEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCC---------------
Confidence            999998754332    23344567899999999999887542   15679999999753222111               


Q ss_pred             ccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeH
Q 039049          150 DYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHI  226 (305)
Q Consensus       150 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  226 (305)
                      .      ..|+.+|...+.+.+.++.+   .++++++++|+.++++.....             .    .+  ....+.+
T Consensus       145 ~------~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~-------------~----~~--~~~~~~~  199 (243)
T PRK07102        145 N------YVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGL-------------K----LP--GPLTAQP  199 (243)
T ss_pred             C------cccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhcc-------------C----CC--ccccCCH
Confidence            0      45999999999998887654   489999999999988632110             0    01  1225779


Q ss_pred             HHHHHHHHHhhccc
Q 039049          227 DDVVGAHILAMEET  240 (305)
Q Consensus       227 ~D~a~~~~~~~~~~  240 (305)
                      +|+++.+..+++++
T Consensus       200 ~~~a~~i~~~~~~~  213 (243)
T PRK07102        200 EEVAKDIFRAIEKG  213 (243)
T ss_pred             HHHHHHHHHHHhCC
Confidence            99999999999864

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.88  E-value=2.1e-20  Score=154.68  Aligned_cols=217  Identities=16%  Similarity=0.199  Sum_probs=151.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|+||+++++.|+++|++|+++.|+..... ............++.++++|+.|.+.+.++++       ++
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i   81 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCA-KDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV   81 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHH-HHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            58999999999999999999999999999999854111 11111111123468899999999888777664       48


Q ss_pred             CEEEEeccccccC----CCCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVP----YDNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |+|||+|+.....    ...+.+...++.|+.++.++.+.+    ++. +.++||++||...+.+....           
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~iss~~~~~~~~~~-----------  149 (245)
T PRK12824         82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQ-GYGRIINISSVNGLKGQFGQ-----------  149 (245)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-CCeEEEEECChhhccCCCCC-----------
Confidence            9999999976432    134566778899999999985544    445 56799999997654332111           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                                ..|+.+|.+.+.+++.++.+   .++++++++|+.+.++......   ...........+      ...+
T Consensus       150 ----------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~---~~~~~~~~~~~~------~~~~  210 (245)
T PRK12824        150 ----------TNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMG---PEVLQSIVNQIP------MKRL  210 (245)
T ss_pred             ----------hHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcC---HHHHHHHHhcCC------CCCC
Confidence                      45999999999888877654   4899999999999887533211   111112222211      3446


Q ss_pred             eeHHHHHHHHHHhhcccc---cCceEEEec
Q 039049          224 VHIDDVVGAHILAMEETR---ASGRLICSS  250 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~---~~~~~~~~~  250 (305)
                      ..++|+++++..++....   .+..+++.+
T Consensus       211 ~~~~~va~~~~~l~~~~~~~~~G~~~~~~~  240 (245)
T PRK12824        211 GTPEEIAAAVAFLVSEAAGFITGETISING  240 (245)
T ss_pred             CCHHHHHHHHHHHcCccccCccCcEEEECC
Confidence            788999999998886532   244577754

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.88  E-value=3.3e-21  Score=158.23  Aligned_cols=218  Identities=25%  Similarity=0.287  Sum_probs=150.2

Q ss_pred             EEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEeccc
Q 039049            4 YCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTASP   83 (305)
Q Consensus         4 ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a~~   83 (305)
                      |+|+||||.+|+++++.|++.+++|++++|+..+.. ...+..     .+++.+++|+.|.+.+.++++++|.||.+.+.
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~-~~~l~~-----~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~   74 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDR-AQQLQA-----LGAEVVEADYDDPESLVAALKGVDAVFSVTPP   74 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHH-HHHHHH-----TTTEEEES-TT-HHHHHHHHTTCSEEEEESSC
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhh-hhhhhc-----ccceEeecccCCHHHHHHHHcCCceEEeecCc
Confidence            799999999999999999999999999999984221 112211     26788999999999999999999999988776


Q ss_pred             cccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHHHHH
Q 039049           84 VLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAK  163 (305)
Q Consensus        84 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK  163 (305)
                      ..            ..-+....+++++|+++ |+++||+.|....+            .+.....|.      ...-..|
T Consensus        75 ~~------------~~~~~~~~~li~Aa~~a-gVk~~v~ss~~~~~------------~~~~~~~p~------~~~~~~k  123 (233)
T PF05368_consen   75 SH------------PSELEQQKNLIDAAKAA-GVKHFVPSSFGADY------------DESSGSEPE------IPHFDQK  123 (233)
T ss_dssp             SC------------CCHHHHHHHHHHHHHHH-T-SEEEESEESSGT------------TTTTTSTTH------HHHHHHH
T ss_pred             ch------------hhhhhhhhhHHHhhhcc-ccceEEEEEecccc------------ccccccccc------chhhhhh
Confidence            43            11234478999999999 89999974432211            111112222      3344578


Q ss_pred             HHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCC--CC-C--CCCCccc-eeHHHHHHHHHHhh
Q 039049          164 TIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLR--GE-Y--PNTTVGF-VHIDDVVGAHILAM  237 (305)
Q Consensus       164 ~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~--~~-~--~~~~~~~-i~v~D~a~~~~~~~  237 (305)
                      ...|+.++    +.+++++++||+.++........     . .....+..  .. .  ++....+ ++.+|+++++..++
T Consensus       124 ~~ie~~l~----~~~i~~t~i~~g~f~e~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il  193 (233)
T PF05368_consen  124 AEIEEYLR----ESGIPYTIIRPGFFMENLLPPFA-----P-VVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAIL  193 (233)
T ss_dssp             HHHHHHHH----HCTSEBEEEEE-EEHHHHHTTTH-----H-TTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHH
T ss_pred             hhhhhhhh----hccccceeccccchhhhhhhhhc-----c-cccccccceEEEEccCCCccccccccHHHHHHHHHHHH
Confidence            88887774    45999999999988765422110     0 00011111  11 1  2224556 49999999999999


Q ss_pred             cccccC---ceEEEecCCcCHHHHHHHHHHhCCC
Q 039049          238 EETRAS---GRLICSSSVAHWSPIIEMLKATYPS  268 (305)
Q Consensus       238 ~~~~~~---~~~~~~~~~~s~~el~~~i~~~~~~  268 (305)
                      .++...   ..+.++++.+|+.|+++.+.+.+|+
T Consensus       194 ~~p~~~~~~~~~~~~~~~~t~~eia~~~s~~~G~  227 (233)
T PF05368_consen  194 LDPEKHNNGKTIFLAGETLTYNEIAAILSKVLGK  227 (233)
T ss_dssp             HSGGGTTEEEEEEEGGGEEEHHHHHHHHHHHHTS
T ss_pred             cChHHhcCCEEEEeCCCCCCHHHHHHHHHHHHCC
Confidence            997765   2466778899999999999999975

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.87  E-value=1.4e-20  Score=148.26  Aligned_cols=208  Identities=18%  Similarity=0.152  Sum_probs=154.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |.++||||++.||.++++.|++.|++|++..|+.+........   ... ..+..+..|++|.+++.++++       ++
T Consensus         7 kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~---~~~-~~~~~~~~DVtD~~~~~~~i~~~~~~~g~i   82 (246)
T COG4221           7 KVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADE---IGA-GAALALALDVTDRAAVEAAIEALPEEFGRI   82 (246)
T ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHh---hcc-CceEEEeeccCCHHHHHHHHHHHHHhhCcc
Confidence            4589999999999999999999999999999998755443221   111 367888999999988665553       68


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |++|||||......    ..+++..++++|+.|..+..++.-    +. +..++|.+||.+..+..+..           
T Consensus        83 DiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r-~~G~IiN~~SiAG~~~y~~~-----------  150 (246)
T COG4221          83 DILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVER-KSGHIINLGSIAGRYPYPGG-----------  150 (246)
T ss_pred             cEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhc-CCceEEEeccccccccCCCC-----------
Confidence            99999999877643    467889999999999999988763    33 44599999998855444332           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCc-hHHHHHHHHhcCCCCCCCCCcc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTS-TLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                                +.|+.+|++...+.+.+..+.   +++++.+-|+.+-.......... ..........         ...
T Consensus       151 ----------~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~---------~~~  211 (246)
T COG4221         151 ----------AVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYK---------GGT  211 (246)
T ss_pred             ----------ccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHhc---------cCC
Confidence                      669999999998877766554   89999999999855422211111 1112222212         234


Q ss_pred             ceeHHHHHHHHHHhhcccccCc
Q 039049          223 FVHIDDVVGAHILAMEETRASG  244 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~~~~  244 (305)
                      .+..+|+|+++.+++++|..-.
T Consensus       212 ~l~p~dIA~~V~~~~~~P~~vn  233 (246)
T COG4221         212 ALTPEDIAEAVLFAATQPQHVN  233 (246)
T ss_pred             CCCHHHHHHHHHHHHhCCCccc
Confidence            7999999999999999987643

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.87  E-value=2.1e-20  Score=155.98  Aligned_cols=221  Identities=16%  Similarity=0.164  Sum_probs=152.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|+||+++++.|++.|++|++++|+.+.......  .......++.++++|+.|++.+.++++       ++
T Consensus        13 k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~--~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~i   90 (259)
T PRK08213         13 KTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAA--HLEALGIDALWIAADVADEADIERLAEETLERFGHV   90 (259)
T ss_pred             CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH--HHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999997653322211  111223467889999999988866553       57


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA----KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |+|||+|+......    ..+.+...+++|+.++.++++++...    ++.++||++||...+++.+..           
T Consensus        91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~-----------  159 (259)
T PRK08213         91 DILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPE-----------  159 (259)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCcc-----------
Confidence            99999999753321    33455667899999999999987543    255799999997665442110           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                      ..+.      ..|+.+|.+.|.+++.+++++   ++++.+++|+.+-.+....   ....+......+.+      ..-+
T Consensus       160 ~~~~------~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~---~~~~~~~~~~~~~~------~~~~  224 (259)
T PRK08213        160 VMDT------IAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRG---TLERLGEDLLAHTP------LGRL  224 (259)
T ss_pred             ccCc------chHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhh---hhHHHHHHHHhcCC------CCCC
Confidence            0011      569999999999999987764   7999999999886654221   11222222222222      2335


Q ss_pred             eeHHHHHHHHHHhhccccc---CceEEEec
Q 039049          224 VHIDDVVGAHILAMEETRA---SGRLICSS  250 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~~---~~~~~~~~  250 (305)
                      ...+|++.++.+++.....   +..+++.+
T Consensus       225 ~~~~~va~~~~~l~~~~~~~~~G~~~~~~~  254 (259)
T PRK08213        225 GDDEDLKGAALLLASDASKHITGQILAVDG  254 (259)
T ss_pred             cCHHHHHHHHHHHhCccccCccCCEEEECC
Confidence            6789999999888865432   33455554

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.87  E-value=1e-20  Score=156.05  Aligned_cols=200  Identities=16%  Similarity=0.135  Sum_probs=147.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|+||++++++|+++|++|++++|++.+......  .......++.++++|+.+++++.++++       ++
T Consensus         8 ~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~--~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (239)
T PRK07666          8 KNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAE--EVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI   85 (239)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--HHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence            479999999999999999999999999999998654322111  111123468889999999998887775       68


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      |+|||+|+......    ..+.+...+++|+.++.++++.+...   .+.+++|++||...+++....            
T Consensus        86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~------------  153 (239)
T PRK07666         86 DILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVT------------  153 (239)
T ss_pred             cEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCC------------
Confidence            99999999765321    23445678899999999998887532   156789999997755442211            


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccce
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFV  224 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  224 (305)
                               ..|+.+|.+.+.+++.++.+   .+++++++||+.+.++.....         ....+       ....++
T Consensus       154 ---------~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~---------~~~~~-------~~~~~~  208 (239)
T PRK07666        154 ---------SAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDL---------GLTDG-------NPDKVM  208 (239)
T ss_pred             ---------cchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhc---------ccccc-------CCCCCC
Confidence                     55999999999988777644   589999999999987743211         00001       123468


Q ss_pred             eHHHHHHHHHHhhccc
Q 039049          225 HIDDVVGAHILAMEET  240 (305)
Q Consensus       225 ~v~D~a~~~~~~~~~~  240 (305)
                      ..+|+|+++..+++.+
T Consensus       209 ~~~~~a~~~~~~l~~~  224 (239)
T PRK07666        209 QPEDLAEFIVAQLKLN  224 (239)
T ss_pred             CHHHHHHHHHHHHhCC
Confidence            8999999999999875

>PRK06398 aldose dehydrogenase; Validated

Probab=99.87  E-value=2.2e-20  Score=155.74  Aligned_cols=211  Identities=16%  Similarity=0.117  Sum_probs=148.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |++|||||+|+||+++++.|++.|++|++++|+....             .++.++++|+.|++++.++++       ++
T Consensus         7 k~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-------------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i   73 (258)
T PRK06398          7 KVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-------------NDVDYFKVDVSNKEQVIKGIDYVISKYGRI   73 (258)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-------------CceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            7899999999999999999999999999999876421             157889999999988877664       58


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      |+|||+||......    ..+.+...+++|+.++..+++++...   .+.+++|++||...+.+.+.             
T Consensus        74 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------  140 (258)
T PRK06398         74 DILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRN-------------  140 (258)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCC-------------
Confidence            99999999754322    34456677899999999998887532   14579999999765433211             


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEecCceecCCCCCCC----CchHHHHHHHHh--cCCCCCCCC
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKDC--GIDMVVVNPSFVVGPLLAPQP----TSTLLLILAMVK--GLRGEYPNT  219 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~i~Rp~~v~G~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~  219 (305)
                        .      ..|+.+|.+.+.+.+.++.++  .++++.++|+.+-.+......    ............  +...  +  
T Consensus       141 --~------~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--  208 (258)
T PRK06398        141 --A------AAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMH--P--  208 (258)
T ss_pred             --C------chhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcC--C--
Confidence              1      669999999999999988775  489999999988766321100    000000000000  0001  1  


Q ss_pred             CccceeHHHHHHHHHHhhccccc---CceEEEec
Q 039049          220 TVGFVHIDDVVGAHILAMEETRA---SGRLICSS  250 (305)
Q Consensus       220 ~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~  250 (305)
                      ...+..++|+|+++++++.....   +..+.+.+
T Consensus       209 ~~~~~~p~eva~~~~~l~s~~~~~~~G~~i~~dg  242 (258)
T PRK06398        209 MKRVGKPEEVAYVVAFLASDLASFITGECVTVDG  242 (258)
T ss_pred             cCCCcCHHHHHHHHHHHcCcccCCCCCcEEEECC
Confidence            23467899999999999875432   33455543

>PRK08264 short chain dehydrogenase; Validated

Probab=99.87  E-value=1.6e-20  Score=154.80  Aligned_cols=162  Identities=19%  Similarity=0.159  Sum_probs=128.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc---CCCEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ---GVDGV   77 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~V   77 (305)
                      ++|+||||+|+||+++++.|+++|+ +|++++|+.++..+         ...++.++.+|+.|.+.+.++++   .+|+|
T Consensus         7 ~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~~~~id~v   77 (238)
T PRK08264          7 KVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---------LGPRVVPLQLDVTDPASVAAAAEAASDVTIL   77 (238)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---------cCCceEEEEecCCCHHHHHHHHHhcCCCCEE
Confidence            4799999999999999999999998 99999998754322         13378899999999999888876   57999


Q ss_pred             EEeccccc-cC----CCCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCCCCc
Q 039049           78 FHTASPVL-VP----YDNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDP  149 (305)
Q Consensus        78 i~~a~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~  149 (305)
                      ||+|+... ..    ...+.+...+++|+.++.++++++...   .+.++||++||...+.+....              
T Consensus        78 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~--------------  143 (238)
T PRK08264         78 VNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNL--------------  143 (238)
T ss_pred             EECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCc--------------
Confidence            99999832 21    134556678899999999999886531   156789999997765432211              


Q ss_pred             ccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCC
Q 039049          150 DYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPL  193 (305)
Q Consensus       150 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~  193 (305)
                             ..|+.+|.+.|.+.+.++.+.   +++++++||+.+.++.
T Consensus       144 -------~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~  183 (238)
T PRK08264        144 -------GTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDM  183 (238)
T ss_pred             -------hHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccc
Confidence                   669999999999988877653   8999999999987764

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.87  E-value=2.3e-20  Score=157.01  Aligned_cols=216  Identities=14%  Similarity=0.109  Sum_probs=148.5

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      ||+++||||+|+||+++++.|+++|++|++++|+.......   .     ..++.++.+|+.+.+.+.++++       +
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~---~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   72 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEAL---A-----AAGFTAVQLDVNDGAALARLAEELEAEHGG   72 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---H-----HCCCeEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            88999999999999999999999999999999986532221   1     1146788999999888877663       5


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA--KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      +|+|||+||......    ..+.....+++|+.++.++++.+...  .+..++|++||...+.+.+.             
T Consensus        73 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------  139 (274)
T PRK05693         73 LDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTPF-------------  139 (274)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCCC-------------
Confidence            799999999754322    33456778899999999999887431  13468999999764433211             


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCc----------hHHHHHHHHhcCCC
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTS----------TLLLILAMVKGLRG  214 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~----------~~~~~~~~~~~~~~  214 (305)
                        .      ..|+.+|...+.+.+.+..+   .|+++++++|+.+..+........          ..............
T Consensus       140 --~------~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (274)
T PRK05693        140 --A------GAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARA  211 (274)
T ss_pred             --c------cHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHh
Confidence              1      56999999999988777654   589999999999987643221100          00000000000000


Q ss_pred             CCCCCCccceeHHHHHHHHHHhhcccccCceEEEe
Q 039049          215 EYPNTTVGFVHIDDVVGAHILAMEETRASGRLICS  249 (305)
Q Consensus       215 ~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~  249 (305)
                          ........+|+|+.++.+++++.....+.++
T Consensus       212 ----~~~~~~~~~~~a~~i~~~~~~~~~~~~~~~g  242 (274)
T PRK05693        212 ----SQDNPTPAAEFARQLLAAVQQSPRPRLVRLG  242 (274)
T ss_pred             ----ccCCCCCHHHHHHHHHHHHhCCCCCceEEec
Confidence                0012357899999999999876554444443

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.87  E-value=2.9e-20  Score=155.28  Aligned_cols=215  Identities=19%  Similarity=0.172  Sum_probs=147.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|+||+++++.|+++|++|+++.|+.....           ..++.++++|+.|.+.+.++++       .+
T Consensus        10 k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   78 (260)
T PRK06523         10 KRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDL-----------PEGVEFVAADLTTAEGCAAVARAVLERLGGV   78 (260)
T ss_pred             CEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhhc-----------CCceeEEecCCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999864211           2257889999999887776543       57


Q ss_pred             CEEEEeccccccC------CCCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCC
Q 039049           75 DGVFHTASPVLVP------YDNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNES  144 (305)
Q Consensus        75 d~Vi~~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~  144 (305)
                      |+|||+||.....      ...+.+...+++|+.++.++.+.+    ++. +.+++|++||...+.+..           
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~ii~isS~~~~~~~~-----------  146 (260)
T PRK06523         79 DILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIAR-GSGVIIHVTSIQRRLPLP-----------  146 (260)
T ss_pred             CEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CCcEEEEEecccccCCCC-----------
Confidence            9999999964321      134566778899999998887665    333 456899999976533211           


Q ss_pred             CCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCC--------CchHHHHHHHHhcCC
Q 039049          145 HWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQP--------TSTLLLILAMVKGLR  213 (305)
Q Consensus       145 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~--------~~~~~~~~~~~~~~~  213 (305)
                         ...      ..|+.+|...+.+++.++.++   ++++++++|+.+.++......        .............. 
T Consensus       147 ---~~~------~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  216 (260)
T PRK06523        147 ---EST------TAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSL-  216 (260)
T ss_pred             ---CCc------chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHh-
Confidence               001      569999999999988887654   799999999999887532100        00000000110000 


Q ss_pred             CCCCCCCccceeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          214 GEYPNTTVGFVHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       214 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      ...+  ...+..++|++.++.+++.....   +..+.+.+.
T Consensus       217 ~~~p--~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg  255 (260)
T PRK06523        217 GGIP--LGRPAEPEEVAELIAFLASDRAASITGTEYVIDGG  255 (260)
T ss_pred             ccCc--cCCCCCHHHHHHHHHHHhCcccccccCceEEecCC
Confidence            0011  23356889999999999975422   445666543

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.87  E-value=3.1e-20  Score=155.08  Aligned_cols=212  Identities=13%  Similarity=0.075  Sum_probs=147.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|+++.|+.+...+............++.++++|+.|.+++.++++       .+
T Consensus         8 k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   87 (260)
T PRK07063          8 KVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFGPL   87 (260)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            67999999999999999999999999999999765433221111110123468899999999988877765       58


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      |++||+||......    ..+.+...+++|+.++.++++++...   .+..++|++||...+.+.+.             
T Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------  154 (260)
T PRK07063         88 DVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPG-------------  154 (260)
T ss_pred             cEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCC-------------
Confidence            99999999754321    34566778999999999998886431   14468999999764332211             


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCC---CchHHHHHHHHhcCCCCCCCCCc
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQP---TSTLLLILAMVKGLRGEYPNTTV  221 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  221 (305)
                        .      ..|+.+|.+.+.+.+.++.++   ++++..++||.+-.+......   ..............    +  ..
T Consensus       155 --~------~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~----~--~~  220 (260)
T PRK07063        155 --C------FPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQ----P--MK  220 (260)
T ss_pred             --c------hHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcC----C--CC
Confidence              0      569999999999999988764   799999999998765421100   00000111111111    1  22


Q ss_pred             cceeHHHHHHHHHHhhccc
Q 039049          222 GFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~  240 (305)
                      .+..++|++.++++++...
T Consensus       221 r~~~~~~va~~~~fl~s~~  239 (260)
T PRK07063        221 RIGRPEEVAMTAVFLASDE  239 (260)
T ss_pred             CCCCHHHHHHHHHHHcCcc
Confidence            3567899999999998754

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.87  E-value=2.9e-20  Score=154.86  Aligned_cols=215  Identities=17%  Similarity=0.142  Sum_probs=152.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|+||+++++.|+++|++|+++.|+........   ...  ..++..+++|+.+++++.++++       ++
T Consensus        16 k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~---~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   90 (255)
T PRK06841         16 KVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAA---QLL--GGNAKGLVCDVSDSQSVEAAVAAVISAFGRI   90 (255)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---Hhh--CCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            67999999999999999999999999999999865321111   111  2356789999999988877664       57


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      |+|||+||......    ..+.+...+++|+.++.++++++...   .+.++||++||.....+.+..            
T Consensus        91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~------------  158 (255)
T PRK06841         91 DILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERH------------  158 (255)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCC------------
Confidence            99999999765322    23455668999999999999987542   145799999997654332111            


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccce
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFV  224 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  224 (305)
                               ..|+.+|.+.+.+.+.++.+   .+++++.++|+.+..+........  ........+.+      ...+.
T Consensus       159 ---------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~~------~~~~~  221 (255)
T PRK06841        159 ---------VAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAG--EKGERAKKLIP------AGRFA  221 (255)
T ss_pred             ---------chHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccch--hHHHHHHhcCC------CCCCc
Confidence                     55999999999998888766   389999999999987753211110  01111111111      34578


Q ss_pred             eHHHHHHHHHHhhccccc---CceEEEec
Q 039049          225 HIDDVVGAHILAMEETRA---SGRLICSS  250 (305)
Q Consensus       225 ~v~D~a~~~~~~~~~~~~---~~~~~~~~  250 (305)
                      +++|++++++.++.....   +..+.+.+
T Consensus       222 ~~~~va~~~~~l~~~~~~~~~G~~i~~dg  250 (255)
T PRK06841        222 YPEEIAAAALFLASDAAAMITGENLVIDG  250 (255)
T ss_pred             CHHHHHHHHHHHcCccccCccCCEEEECC
Confidence            999999999999976432   33455544

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.87  E-value=3.7e-20  Score=154.86  Aligned_cols=209  Identities=16%  Similarity=0.080  Sum_probs=147.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|+||.+++++|+++|++|++++|+++.......  .......++.++.+|+.+.+++.++++       ++
T Consensus        11 ~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~--~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   88 (263)
T PRK07814         11 QVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAE--QIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL   88 (263)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--HHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999999998654322111  111123468889999999998877664       67


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA----KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |+|||+|+......    ..+.+...+++|+.++.++.+++...    .+.++||++||.....+...            
T Consensus        89 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~------------  156 (263)
T PRK07814         89 DIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRG------------  156 (263)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCC------------
Confidence            99999999754322    23556778999999999999998641    15578999999654322111            


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccce
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC--GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFV  224 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  224 (305)
                         .      ..|+.+|.+.+.+++.+..+.  .++++.++|+.+..+....... ...+ .....+..     ......
T Consensus       157 ---~------~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~-~~~~-~~~~~~~~-----~~~~~~  220 (263)
T PRK07814        157 ---F------AAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAA-NDEL-RAPMEKAT-----PLRRLG  220 (263)
T ss_pred             ---C------chhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccC-CHHH-HHHHHhcC-----CCCCCc
Confidence               1      569999999999999888764  5788899999887654221100 1111 11111111     123357


Q ss_pred             eHHHHHHHHHHhhccc
Q 039049          225 HIDDVVGAHILAMEET  240 (305)
Q Consensus       225 ~v~D~a~~~~~~~~~~  240 (305)
                      .++|++++++++++..
T Consensus       221 ~~~~va~~~~~l~~~~  236 (263)
T PRK07814        221 DPEDIAAAAVYLASPA  236 (263)
T ss_pred             CHHHHHHHHHHHcCcc
Confidence            8999999999998754

>PRK06196 oxidoreductase; Provisional

Probab=99.87  E-value=2.1e-20  Score=160.29  Aligned_cols=220  Identities=19%  Similarity=0.142  Sum_probs=144.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++|+||||+|+||+++++.|++.|++|++++|+.++.....  ...    .++.++++|+.|.+++.++++       ++
T Consensus        27 k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~--~~l----~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~i  100 (315)
T PRK06196         27 KTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREAL--AGI----DGVEVVMLDLADLESVRAFAERFLDSGRRI  100 (315)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--HHh----hhCeEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence            67999999999999999999999999999999865432211  111    147889999999988877663       58


Q ss_pred             CEEEEeccccccCC--CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCC
Q 039049           75 DGVFHTASPVLVPY--DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSD  148 (305)
Q Consensus        75 d~Vi~~a~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~  148 (305)
                      |+||||||......  ..+.++..+++|+.++..+.+.+    ++. +..++|++||..........   .......+..
T Consensus       101 D~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~~~~iV~vSS~~~~~~~~~~---~~~~~~~~~~  176 (315)
T PRK06196        101 DILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAG-AGARVVALSSAGHRRSPIRW---DDPHFTRGYD  176 (315)
T ss_pred             CEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCeEEEECCHHhccCCCCc---cccCccCCCC
Confidence            99999999764321  23456778899999976666654    444 45799999997532211000   0001011111


Q ss_pred             cccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcccee
Q 039049          149 PDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVH  225 (305)
Q Consensus       149 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  225 (305)
                      +.      ..|+.||.+.+.+.+.++++   .++++++++||.+.++........ ..............+   ...+..
T Consensus       177 ~~------~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~  246 (315)
T PRK06196        177 KW------LAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPRE-EQVALGWVDEHGNPI---DPGFKT  246 (315)
T ss_pred             hH------HHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChh-hhhhhhhhhhhhhhh---hhhcCC
Confidence            11      66999999999998887665   479999999999998864321110 000000000000000   012567


Q ss_pred             HHHHHHHHHHhhcccc
Q 039049          226 IDDVVGAHILAMEETR  241 (305)
Q Consensus       226 v~D~a~~~~~~~~~~~  241 (305)
                      ++|.|..+++++..+.
T Consensus       247 ~~~~a~~~~~l~~~~~  262 (315)
T PRK06196        247 PAQGAATQVWAATSPQ  262 (315)
T ss_pred             HhHHHHHHHHHhcCCc
Confidence            8999999999987543

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.87  E-value=4.7e-20  Score=153.63  Aligned_cols=210  Identities=14%  Similarity=0.110  Sum_probs=150.6

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      +|+|+||||+|+||+++++.|++.|++|+++.|+++......  ........++.++.+|+.|++.+.++++       .
T Consensus        11 ~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   88 (256)
T PRK06124         11 GQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAV--AALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGR   88 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH--HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            378999999999999999999999999999999864322211  1111223468899999999988877664       4


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKK----AKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|+|||+|+......    ..+.+...+++|+.++.++.+.+..    . +.++||++||.....+.+..          
T Consensus        89 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~ss~~~~~~~~~~----------  157 (256)
T PRK06124         89 LDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQ-GYGRIIAITSIAGQVARAGD----------  157 (256)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEeechhccCCCCc----------
Confidence            699999999765322    2345667899999999999977644    4 56799999997654332111          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                                 ..|+.+|.+.+.+++.++.+   .++++..++|+.+.++........ ...........+      ...
T Consensus       158 -----------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~-~~~~~~~~~~~~------~~~  219 (256)
T PRK06124        158 -----------AVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAAD-PAVGPWLAQRTP------LGR  219 (256)
T ss_pred             -----------cHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccC-hHHHHHHHhcCC------CCC
Confidence                       56999999999998887655   379999999999998853221111 111111111111      234


Q ss_pred             ceeHHHHHHHHHHhhcccc
Q 039049          223 FVHIDDVVGAHILAMEETR  241 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~  241 (305)
                      +++++|++.++++++....
T Consensus       220 ~~~~~~~a~~~~~l~~~~~  238 (256)
T PRK06124        220 WGRPEEIAGAAVFLASPAA  238 (256)
T ss_pred             CCCHHHHHHHHHHHcCccc
Confidence            7899999999999998654

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.87  E-value=2.7e-20  Score=153.41  Aligned_cols=217  Identities=16%  Similarity=0.135  Sum_probs=151.3

Q ss_pred             EEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CCCE
Q 039049            4 YCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GVDG   76 (305)
Q Consensus         4 ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~   76 (305)
                      |+|||++|+||+++++.|+++|++|++++|+...... ...........++.++++|+.|.+++.++++       .+|+
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAE-EVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDI   79 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHH-HHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            5899999999999999999999999999987532111 1111122223367899999999988877764       4699


Q ss_pred             EEEeccccccC----CCCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCCCCc
Q 039049           77 VFHTASPVLVP----YDNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDP  149 (305)
Q Consensus        77 Vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~  149 (305)
                      |||+|+.....    ...+.+...+++|+.++.++++.+...   .+.++||++||...+++.+..              
T Consensus        80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~--------------  145 (239)
T TIGR01830        80 LVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQ--------------  145 (239)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCC--------------
Confidence            99999986432    134556778999999999999988652   155699999997655432211              


Q ss_pred             ccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeH
Q 039049          150 DYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHI  226 (305)
Q Consensus       150 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  226 (305)
                             ..|+.+|.+.+.+++.+.++   .+++++++||+.+.++.....   ............+      ..-+.++
T Consensus       146 -------~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~---~~~~~~~~~~~~~------~~~~~~~  209 (239)
T TIGR01830       146 -------ANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKL---SEKVKKKILSQIP------LGRFGTP  209 (239)
T ss_pred             -------chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhc---ChHHHHHHHhcCC------cCCCcCH
Confidence                   55999999999888877655   489999999998866532211   1111122222211      2336789


Q ss_pred             HHHHHHHHHhhcccc---cCceEEEecC
Q 039049          227 DDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       227 ~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      +|++.+++.++....   .+..|++.++
T Consensus       210 ~~~a~~~~~~~~~~~~~~~g~~~~~~~g  237 (239)
T TIGR01830       210 EEVANAVAFLASDEASYITGQVIHVDGG  237 (239)
T ss_pred             HHHHHHHHHHhCcccCCcCCCEEEeCCC
Confidence            999999998885532   2446777543

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.87  E-value=3.9e-20  Score=153.07  Aligned_cols=219  Identities=17%  Similarity=0.121  Sum_probs=151.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|+||+++++.|+++|++|+++.|+...... ...........++.++++|+.+.+++.++++       ++
T Consensus         6 ~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   84 (245)
T PRK12937          6 KVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAAD-ELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGRI   84 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHH-HHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999888776532111 1111122223468899999999988888775       58


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCCCcccCCCCCCCc
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA-KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDP  149 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~  149 (305)
                      |+|||+||......    ..+.+...+++|+.++.++++++.+. ...+++|++||.....+.+.               
T Consensus        85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~---------------  149 (245)
T PRK12937         85 DVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLPG---------------  149 (245)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCCC---------------
Confidence            99999999754321    23456667899999999999887653 12258999998764332111               


Q ss_pred             ccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeH
Q 039049          150 DYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHI  226 (305)
Q Consensus       150 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  226 (305)
                      .      ..|+.+|...+.+++.++.++   ++++++++|+.+-.+.....  .....+.......+      ...+.++
T Consensus       150 ~------~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~--~~~~~~~~~~~~~~------~~~~~~~  215 (245)
T PRK12937        150 Y------GPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNG--KSAEQIDQLAGLAP------LERLGTP  215 (245)
T ss_pred             C------chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhccc--CCHHHHHHHHhcCC------CCCCCCH
Confidence            1      569999999999998887653   79999999998876642111  11122222222222      2345688


Q ss_pred             HHHHHHHHHhhccccc---CceEEEec
Q 039049          227 DDVVGAHILAMEETRA---SGRLICSS  250 (305)
Q Consensus       227 ~D~a~~~~~~~~~~~~---~~~~~~~~  250 (305)
                      +|+++++.++++.+..   +..+++++
T Consensus       216 ~d~a~~~~~l~~~~~~~~~g~~~~~~~  242 (245)
T PRK12937        216 EEIAAAVAFLAGPDGAWVNGQVLRVNG  242 (245)
T ss_pred             HHHHHHHHHHcCccccCccccEEEeCC
Confidence            9999999999976433   33456643

>PRK09242 tropinone reductase; Provisional

Probab=99.87  E-value=4.6e-20  Score=153.81  Aligned_cols=220  Identities=14%  Similarity=0.142  Sum_probs=153.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhh-hhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGF-LWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |+++||||+|.||+++++.|++.|++|++++|+.+...+... +... ....++.++++|+.+.+++.++++       +
T Consensus        10 k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   88 (257)
T PRK09242         10 QTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEE-FPEREVHGLAADVSDDEDRRAILDWVEDHWDG   88 (257)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhh-CCCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999999998654332211 1111 112368889999999887766554       5


Q ss_pred             CCEEEEeccccccC----CCCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVP----YDNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|+|||+||.....    ...+.+...+.+|+.++.++++++.    +. +.+++|++||...+.+....          
T Consensus        89 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~~sS~~~~~~~~~~----------  157 (257)
T PRK09242         89 LHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQH-ASSAIVNIGSVSGLTHVRSG----------  157 (257)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCceEEEECccccCCCCCCC----------
Confidence            79999999974322    1345667789999999999988874    33 45789999998655432211          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                                 ..|+.+|...+.+++.++.+   .+++++.++|+.+.++........ ...........+      ..-
T Consensus       158 -----------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~-~~~~~~~~~~~~------~~~  219 (257)
T PRK09242        158 -----------APYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSD-PDYYEQVIERTP------MRR  219 (257)
T ss_pred             -----------cchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCC-hHHHHHHHhcCC------CCC
Confidence                       56999999999999888755   489999999999988764322111 112222222111      233


Q ss_pred             ceeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          223 FVHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      +...+|++.++.+++.....   +..+.+.+.
T Consensus       220 ~~~~~~va~~~~~l~~~~~~~~~g~~i~~~gg  251 (257)
T PRK09242        220 VGEPEEVAAAVAFLCMPAASYITGQCIAVDGG  251 (257)
T ss_pred             CcCHHHHHHHHHHHhCcccccccCCEEEECCC
Confidence            56789999999999875332   334455443

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.87  E-value=4e-20  Score=152.10  Aligned_cols=200  Identities=15%  Similarity=0.104  Sum_probs=144.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCc-chHHHHhcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME-GSFDEAIQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~~~d~Vi~~   80 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.....           ..++.++.+|+.++ +.+.+.+.++|+|||+
T Consensus         6 k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~   74 (235)
T PRK06550          6 KTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL-----------SGNFHFLQLDLSDDLEPLFDWVPSVDILCNT   74 (235)
T ss_pred             CEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc-----------CCcEEEEECChHHHHHHHHHhhCCCCEEEEC
Confidence            68999999999999999999999999999998754211           12578899999887 4444444578999999


Q ss_pred             cccccc-----CCCCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccc
Q 039049           81 ASPVLV-----PYDNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYC  152 (305)
Q Consensus        81 a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~  152 (305)
                      |+....     ....+.+...+++|+.++.++++++...   .+.++||++||...+.+.+..                 
T Consensus        75 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-----------------  137 (235)
T PRK06550         75 AGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGG-----------------  137 (235)
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCC-----------------
Confidence            996421     1134456778999999999999887532   144689999998754432111                 


Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHH
Q 039049          153 KHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDV  229 (305)
Q Consensus       153 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  229 (305)
                          ..|+.+|...+.+.+.++.++   ++++++++|+.+.++....... ............+      ...+...+|+
T Consensus       138 ----~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~------~~~~~~~~~~  206 (235)
T PRK06550        138 ----AAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFE-PGGLADWVARETP------IKRWAEPEEV  206 (235)
T ss_pred             ----cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccC-chHHHHHHhccCC------cCCCCCHHHH
Confidence                459999999999888877664   8999999999998875432211 1111112221211      3447889999


Q ss_pred             HHHHHHhhccc
Q 039049          230 VGAHILAMEET  240 (305)
Q Consensus       230 a~~~~~~~~~~  240 (305)
                      |.++++++...
T Consensus       207 a~~~~~l~s~~  217 (235)
T PRK06550        207 AELTLFLASGK  217 (235)
T ss_pred             HHHHHHHcChh
Confidence            99999999754

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.87  E-value=9.1e-21  Score=146.93  Aligned_cols=277  Identities=15%  Similarity=0.146  Sum_probs=199.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHc-CCe-EEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDK-GHM-VRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGV   77 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~-g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~V   77 (305)
                      .+||||||-|.+|..+++.|... |.+ |+.-+.-.....-          .++-.++..|+.|...++++.-  .+|.+
T Consensus        45 PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V----------~~~GPyIy~DILD~K~L~eIVVn~RIdWL  114 (366)
T KOG2774|consen   45 PRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANV----------TDVGPYIYLDILDQKSLEEIVVNKRIDWL  114 (366)
T ss_pred             CeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhh----------cccCCchhhhhhccccHHHhhccccccee
Confidence            47999999999999999988765 544 4443322111110          1245788999999999999763  68999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccch
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNL  157 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  157 (305)
                      ||..+..+.-.. .+.....++|+.|..|+++.|+++ +. ++...|+.+++|+...   ..|-..-+...|-      +
T Consensus       115 ~HfSALLSAvGE-~NVpLA~~VNI~GvHNil~vAa~~-kL-~iFVPSTIGAFGPtSP---RNPTPdltIQRPR------T  182 (366)
T KOG2774|consen  115 VHFSALLSAVGE-TNVPLALQVNIRGVHNILQVAAKH-KL-KVFVPSTIGAFGPTSP---RNPTPDLTIQRPR------T  182 (366)
T ss_pred             eeHHHHHHHhcc-cCCceeeeecchhhhHHHHHHHHc-Ce-eEeecccccccCCCCC---CCCCCCeeeecCc------e
Confidence            999887654323 334447899999999999999998 65 4556688888876522   1233333333333      7


Q ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC--chHHHHHHHHhcCCCC---CCCCCccceeHHHHHHH
Q 039049          158 WYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPT--STLLLILAMVKGLRGE---YPNTTVGFVHIDDVVGA  232 (305)
Q Consensus       158 ~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~---~~~~~~~~i~v~D~a~~  232 (305)
                      .||.||.-+|-+-..+...+|+++-.+|.+.+..........  .....+..++++++..   -++.....+|.+|+.++
T Consensus       183 IYGVSKVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~  262 (366)
T KOG2774|consen  183 IYGVSKVHAELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMAS  262 (366)
T ss_pred             eechhHHHHHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHH
Confidence            899999999999999988999999999988877754332221  1233445555444433   36778899999999999


Q ss_pred             HHHhhccccc---CceEEEecCCcCHHHHHHHHHHhCCCCCCCCCCCC--CCCCCCCcccchhHHHH-hCCCccc
Q 039049          233 HILAMEETRA---SGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSK--QEGDNSPHSMDTSKLFE-LGFVGFK  301 (305)
Q Consensus       233 ~~~~~~~~~~---~~~~~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-lg~~~~~  301 (305)
                      ++.++..+..   ...||+++-.++..|+++.+.++.+.+.+......  .-.+...+.+|-+.++. ..| +.+
T Consensus       263 ~~~~~~a~~~~lkrr~ynvt~~sftpee~~~~~~~~~p~~~i~y~~~srq~iad~wp~~~dds~ar~~wh~-~h~  336 (366)
T KOG2774|consen  263 VIQLLAADSQSLKRRTYNVTGFSFTPEEIADAIRRVMPGFEIDYDICTRQSIADSWPMSLDDSEARTEWHE-KHS  336 (366)
T ss_pred             HHHHHhCCHHHhhhheeeeceeccCHHHHHHHHHhhCCCceeecccchhhhhhhhcccccCchhHhhHHHH-hhh
Confidence            9999877653   45799999999999999999999987665544433  33455667888888887 777 543

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.87  E-value=4.3e-20  Score=153.48  Aligned_cols=209  Identities=14%  Similarity=0.170  Sum_probs=143.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeC-CCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--------
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRD-PEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--------   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--------   72 (305)
                      |+++||||+|+||+++++.|++.|++|++..++ .+......  .........+..+++|+.+.+.+..+++        
T Consensus         5 k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (252)
T PRK12747          5 KVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETV--YEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   82 (252)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH--HHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence            689999999999999999999999999887543 33222111  1111123356788899998776554331        


Q ss_pred             -----CCCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCCCcccC
Q 039049           73 -----GVDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA-KSVKRVVLTSSCSSIRYRHDAQQVSPLN  142 (305)
Q Consensus        73 -----~~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~  142 (305)
                           ++|++|||||......    ..+.+...+++|+.++..+++++... ....+||++||...+.+.+.        
T Consensus        83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~--------  154 (252)
T PRK12747         83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPD--------  154 (252)
T ss_pred             hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCCC--------
Confidence                 5899999999754321    23345778889999999999887653 12258999999875433211        


Q ss_pred             CCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCC
Q 039049          143 ESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNT  219 (305)
Q Consensus       143 E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (305)
                             .      ..|+.||.+.+.+++.++.++   ++++..+.|+.+.++........ . .........     ..
T Consensus       155 -------~------~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~-~-~~~~~~~~~-----~~  214 (252)
T PRK12747        155 -------F------IAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSD-P-MMKQYATTI-----SA  214 (252)
T ss_pred             -------c------hhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccC-H-HHHHHHHhc-----Cc
Confidence                   0      569999999999998887664   89999999999988753221111 0 111111110     01


Q ss_pred             CccceeHHHHHHHHHHhhccc
Q 039049          220 TVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       220 ~~~~i~v~D~a~~~~~~~~~~  240 (305)
                      ...+.+++|++.++.+++...
T Consensus       215 ~~~~~~~~dva~~~~~l~s~~  235 (252)
T PRK12747        215 FNRLGEVEDIADTAAFLASPD  235 (252)
T ss_pred             ccCCCCHHHHHHHHHHHcCcc
Confidence            345789999999999998753

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.87  E-value=2.1e-20  Score=151.69  Aligned_cols=206  Identities=15%  Similarity=0.125  Sum_probs=156.0

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |++++|||||+.||.++++.|+++|++|+++.|+.+++.....-....+ .-.+.++.+|+.+++++.++.+       .
T Consensus         6 ~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~-~v~v~vi~~DLs~~~~~~~l~~~l~~~~~~   84 (265)
T COG0300           6 GKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT-GVEVEVIPADLSDPEALERLEDELKERGGP   84 (265)
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhh-CceEEEEECcCCChhHHHHHHHHHHhcCCc
Confidence            4689999999999999999999999999999999886665433222111 3367899999999998888764       5


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|++|||||......    +.+.....+++|+.+...|..+..    +. +..++|.++|...+-+.+..          
T Consensus        85 IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~-~~G~IiNI~S~ag~~p~p~~----------  153 (265)
T COG0300          85 IDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVER-GAGHIINIGSAAGLIPTPYM----------  153 (265)
T ss_pred             ccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEechhhcCCCcch----------
Confidence            899999999987653    456677899999999888877653    33 55689999998876554332          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                                 ..|+.||...-.+...+..+   .|+.++.+.||.+.......             .+..........-
T Consensus       154 -----------avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~-------------~~~~~~~~~~~~~  209 (265)
T COG0300         154 -----------AVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDA-------------KGSDVYLLSPGEL  209 (265)
T ss_pred             -----------HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccccc-------------cccccccccchhh
Confidence                       66999999988877666655   48999999999988775421             0111111111456


Q ss_pred             ceeHHHHHHHHHHhhccccc
Q 039049          223 FVHIDDVVGAHILAMEETRA  242 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~~  242 (305)
                      ++..+|+|+..+..+++...
T Consensus       210 ~~~~~~va~~~~~~l~~~k~  229 (265)
T COG0300         210 VLSPEDVAEAALKALEKGKR  229 (265)
T ss_pred             ccCHHHHHHHHHHHHhcCCc
Confidence            89999999999999987543

>PRK12743 oxidoreductase; Provisional

Probab=99.87  E-value=3.6e-20  Score=154.30  Aligned_cols=219  Identities=15%  Similarity=0.066  Sum_probs=150.7

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcc-cchhhhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDL-SKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      |++++||||+|+||++++++|++.|++|+++.|+.... ....  ........++.++++|+.+++++.++++       
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETA--EEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLG   79 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH--HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999999887654321 1111  1111223478899999999888777664       


Q ss_pred             CCCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCCCCcccCCC
Q 039049           73 GVDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA----KSVKRVVLTSSCSSIRYRHDAQQVSPLNES  144 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~  144 (305)
                      .+|+|||+|+......    ..+.+...+++|+.++..+++++...    +..+++|++||.....+..           
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~-----------  148 (256)
T PRK12743         80 RIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLP-----------  148 (256)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCC-----------
Confidence            5799999999765321    34556778999999999999887543    1135899999965322111           


Q ss_pred             CCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCc
Q 039049          145 HWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTV  221 (305)
Q Consensus       145 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (305)
                          +.      ..|+.+|.+.+.+++.++.+   .+++++.++|+.+.++.......   ........+.+      ..
T Consensus       149 ----~~------~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~---~~~~~~~~~~~------~~  209 (256)
T PRK12743        149 ----GA------SAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDS---DVKPDSRPGIP------LG  209 (256)
T ss_pred             ----Cc------chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccCh---HHHHHHHhcCC------CC
Confidence                11      56999999999998888765   37999999999999875432111   11111111111      12


Q ss_pred             cceeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          222 GFVHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      .+.+.+|++.++.+++.....   +..+.+.+.
T Consensus       210 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg  242 (256)
T PRK12743        210 RPGDTHEIASLVAWLCSEGASYTTGQSLIVDGG  242 (256)
T ss_pred             CCCCHHHHHHHHHHHhCccccCcCCcEEEECCC
Confidence            356889999999999875432   334555543

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.87  E-value=3e-20  Score=153.90  Aligned_cols=209  Identities=15%  Similarity=0.116  Sum_probs=148.3

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEE-EeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTT-VRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      |++|+||||+|+||.++++.|++.|++|+++ .|++........  .......++.++.+|+.|++.+.++++       
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLE--EIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFG   82 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH--HHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            4689999999999999999999999999998 887653322111  111123468899999999988877665       


Q ss_pred             CCCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           73 GVDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      ++|+|||+++......    ..+.....+++|+.++.++++.+...   .+.++||++||...+++....          
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~----------  152 (247)
T PRK05565         83 KIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCE----------  152 (247)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCc----------
Confidence            6899999999864321    34456778899999988888877542   145689999997765442211          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                                 ..|+.+|...+.+++.++.+   .+++++++||+.+..+......   ..........    .+  ...
T Consensus       153 -----------~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~---~~~~~~~~~~----~~--~~~  212 (247)
T PRK05565        153 -----------VLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFS---EEDKEGLAEE----IP--LGR  212 (247)
T ss_pred             -----------cHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccC---hHHHHHHHhc----CC--CCC
Confidence                       55999999999888777655   3899999999998766432211   1111111111    11  344


Q ss_pred             ceeHHHHHHHHHHhhcccc
Q 039049          223 FVHIDDVVGAHILAMEETR  241 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~  241 (305)
                      +..++|++.++++++....
T Consensus       213 ~~~~~~va~~~~~l~~~~~  231 (247)
T PRK05565        213 LGKPEEIAKVVLFLASDDA  231 (247)
T ss_pred             CCCHHHHHHHHHHHcCCcc
Confidence            6799999999999987643

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.87  E-value=6.1e-20  Score=153.14  Aligned_cols=218  Identities=15%  Similarity=0.162  Sum_probs=152.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++||||||+|+||.++++.|++.|++|+++.|+ ..........  .....++.++++|+.+.+.+.++++       ++
T Consensus        16 k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   92 (258)
T PRK06935         16 KVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLI--EKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI   92 (258)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHH--HhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            679999999999999999999999999999997 3222222211  1123468899999999988887765       57


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      |++||+|+......    ..+.+...+++|+.++..+.+++...   .+.+++|++||...+.+.+..            
T Consensus        93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------------  160 (258)
T PRK06935         93 DILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFV------------  160 (258)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCc------------
Confidence            99999999764321    24456778899999988888766431   145789999998765432211            


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccce
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFV  224 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  224 (305)
                               ..|+.+|.+.+.+.+.++++.   ++++++++|+.+..+........ ...........    +  ...+.
T Consensus       161 ---------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~-~~~~~~~~~~~----~--~~~~~  224 (258)
T PRK06935        161 ---------PAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRAD-KNRNDEILKRI----P--AGRWG  224 (258)
T ss_pred             ---------hhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccC-hHHHHHHHhcC----C--CCCCC
Confidence                     559999999999999988764   79999999999987753221111 11111111111    1  34478


Q ss_pred             eHHHHHHHHHHhhcccc---cCceEEEec
Q 039049          225 HIDDVVGAHILAMEETR---ASGRLICSS  250 (305)
Q Consensus       225 ~v~D~a~~~~~~~~~~~---~~~~~~~~~  250 (305)
                      ..+|++..+.+++....   .+..+.+.+
T Consensus       225 ~~~dva~~~~~l~s~~~~~~~G~~i~~dg  253 (258)
T PRK06935        225 EPDDLMGAAVFLASRASDYVNGHILAVDG  253 (258)
T ss_pred             CHHHHHHHHHHHcChhhcCCCCCEEEECC
Confidence            88999999999887543   233455543

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.87  E-value=5.9e-20  Score=152.66  Aligned_cols=211  Identities=17%  Similarity=0.102  Sum_probs=150.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|++.|++|++++|+....          ....++.++++|+.+.+++.++++       ++
T Consensus         7 k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~----------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   76 (252)
T PRK07856          7 RVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPET----------VDGRPAEFHAADVRDPDQVAALVDAIVERHGRL   76 (252)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhh----------hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            6899999999999999999999999999999986430          012367889999999988887764       46


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA----KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |+||||||......    ..+.+...+++|+.++..+++++...    .+..+||++||...+.+.+..           
T Consensus        77 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~-----------  145 (252)
T PRK07856         77 DVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGT-----------  145 (252)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCC-----------
Confidence            99999999754321    33456678999999999999987541    134689999997654332211           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccce
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC--GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFV  224 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  224 (305)
                                ..|+.+|...+.+++.++.++  .+++..++|+.+..+........ ...........+      ...+.
T Consensus       146 ----------~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~------~~~~~  208 (252)
T PRK07856        146 ----------AAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGD-AEGIAAVAATVP------LGRLA  208 (252)
T ss_pred             ----------chhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccC-HHHHHHHhhcCC------CCCCc
Confidence                      569999999999999988764  38899999999987643211111 111111111111      23467


Q ss_pred             eHHHHHHHHHHhhccccc--Cc-eEEEec
Q 039049          225 HIDDVVGAHILAMEETRA--SG-RLICSS  250 (305)
Q Consensus       225 ~v~D~a~~~~~~~~~~~~--~~-~~~~~~  250 (305)
                      .++|++.++++++.....  .+ .+.+.+
T Consensus       209 ~p~~va~~~~~L~~~~~~~i~G~~i~vdg  237 (252)
T PRK07856        209 TPADIAWACLFLASDLASYVSGANLEVHG  237 (252)
T ss_pred             CHHHHHHHHHHHcCcccCCccCCEEEECC
Confidence            899999999999875432  33 455643

>PRK08643 acetoin reductase; Validated

Probab=99.86  E-value=5.5e-20  Score=153.23  Aligned_cols=211  Identities=14%  Similarity=0.085  Sum_probs=144.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.........  .......++.++++|+.+++.+.++++       ++
T Consensus         3 k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   80 (256)
T PRK08643          3 KVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAAD--KLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDL   80 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--HHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            679999999999999999999999999999998654332211  111123467889999999988777664       57


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA----KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |+||||||......    ..+.+...+++|+.++..+++.+...    +...++|++||...+.+.+.            
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------  148 (256)
T PRK08643         81 NVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPE------------  148 (256)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCC------------
Confidence            99999998754322    23455678899999988777766432    12358999999765443211            


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCC-------CchHHHHHHHHhcCCCCC
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQP-------TSTLLLILAMVKGLRGEY  216 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~-------~~~~~~~~~~~~~~~~~~  216 (305)
                         .      ..|+.+|.+.+.+.+.++.+   .|++++.++|+.+.++......       .....+........ .  
T Consensus       149 ---~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--  216 (256)
T PRK08643        149 ---L------AVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKD-I--  216 (256)
T ss_pred             ---C------chhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhcc-C--
Confidence               1      56999999999988887765   4799999999999876421100       00000000101110 1  


Q ss_pred             CCCCccceeHHHHHHHHHHhhccc
Q 039049          217 PNTTVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       217 ~~~~~~~i~v~D~a~~~~~~~~~~  240 (305)
                      +  ...+...+|++.++.+++...
T Consensus       217 ~--~~~~~~~~~va~~~~~L~~~~  238 (256)
T PRK08643        217 T--LGRLSEPEDVANCVSFLAGPD  238 (256)
T ss_pred             C--CCCCcCHHHHHHHHHHHhCcc
Confidence            1  234678999999999998754

>PRK08017 oxidoreductase; Provisional

Probab=99.86  E-value=1.2e-20  Score=157.30  Aligned_cols=203  Identities=18%  Similarity=0.148  Sum_probs=141.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--------~   73 (305)
                      ++|+||||+|+||+++++.|+++|++|+++.|+.++.....   .     .++..+++|+.|.+++.++++        .
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~---~-----~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   74 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN---S-----LGFTGILLDLDDPESVERAADEVIALTDNR   74 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH---h-----CCCeEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence            57999999999999999999999999999999875432211   1     146788999999877665543        4


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHH----HHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNV----LSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l----~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|.+||+||......    ..+.....++.|+.++.++    ++.+++. +.+++|++||...+.+...           
T Consensus        75 ~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~iv~~ss~~~~~~~~~-----------  142 (256)
T PRK08017         75 LYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPH-GEGRIVMTSSVMGLISTPG-----------  142 (256)
T ss_pred             CeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCCEEEEEcCcccccCCCC-----------
Confidence            689999999754321    3344567889999988876    4555555 6789999999754322111           


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHH---HHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCC-CCCc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIA---KDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYP-NTTV  221 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  221 (305)
                          .      ..|+.+|...|.+.+.+.   ...+++++++||+.+..+......        ......+...+ ...+
T Consensus       143 ----~------~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~--------~~~~~~~~~~~~~~~~  204 (256)
T PRK08017        143 ----R------GAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVN--------QTQSDKPVENPGIAAR  204 (256)
T ss_pred             ----c------cHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhccc--------chhhccchhhhHHHhh
Confidence                1      569999999998876553   345899999999887654321100        00001111111 1135


Q ss_pred             cceeHHHHHHHHHHhhccccc
Q 039049          222 GFVHIDDVVGAHILAMEETRA  242 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~~~  242 (305)
                      .+++++|+++++..+++++..
T Consensus       205 ~~~~~~d~a~~~~~~~~~~~~  225 (256)
T PRK08017        205 FTLGPEAVVPKLRHALESPKP  225 (256)
T ss_pred             cCCCHHHHHHHHHHHHhCCCC
Confidence            689999999999999987654

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.86  E-value=3.4e-20  Score=154.30  Aligned_cols=209  Identities=12%  Similarity=0.073  Sum_probs=149.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      +++|||||+|+||++++++|++.|++|++++|+..+.....  ........++..+.+|+.|.+.+.++++       ++
T Consensus        10 k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~--~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   87 (254)
T PRK08085         10 KNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAV--AKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI   87 (254)
T ss_pred             CEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH--HHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence            67999999999999999999999999999999865432221  1111123367788999999988887664       47


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      |+|||+|+......    ..+.+...+++|+.++..+.+.+...   .+.++||++||.....+...             
T Consensus        88 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-------------  154 (254)
T PRK08085         88 DVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDT-------------  154 (254)
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCC-------------
Confidence            99999999754321    34566778999999999988887542   14568999999754322111             


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccce
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFV  224 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  224 (305)
                        .      ..|+.+|.+.+.+++.++.+.   ++++..++|+.+..+....... ...+........+      ...+.
T Consensus       155 --~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~-~~~~~~~~~~~~p------~~~~~  219 (254)
T PRK08085        155 --I------TPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVE-DEAFTAWLCKRTP------AARWG  219 (254)
T ss_pred             --C------cchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhcc-CHHHHHHHHhcCC------CCCCc
Confidence              1      559999999999999987664   8999999999998875432111 1111112221111      34578


Q ss_pred             eHHHHHHHHHHhhccc
Q 039049          225 HIDDVVGAHILAMEET  240 (305)
Q Consensus       225 ~v~D~a~~~~~~~~~~  240 (305)
                      ..+|++.++.+++...
T Consensus       220 ~~~~va~~~~~l~~~~  235 (254)
T PRK08085        220 DPQELIGAAVFLSSKA  235 (254)
T ss_pred             CHHHHHHHHHHHhCcc
Confidence            8999999999998753

>PRK07069 short chain dehydrogenase; Validated

Probab=99.86  E-value=2.7e-20  Score=154.62  Aligned_cols=209  Identities=15%  Similarity=0.176  Sum_probs=143.5

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCCeEEEEEeC-CCcccchhh-hhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGHMVRTTVRD-PEDLSKVGF-LWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~-~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      +++||||+|+||+++++.|+++|++|+++.|+ .+....... +.... ....+..+++|+.|.+++.++++       +
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   79 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAH-GEGVAFAAVQDVTDEAQWQALLAQAADAMGG   79 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcC-CCceEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            48999999999999999999999999999997 332222111 11111 01134467899999988877664       5


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHH----HHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIK----GTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~----~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|+|||+|+......    ..+.....+++|+.    ++..++..+++. +.++||++||...+.+.+..          
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~~ss~~~~~~~~~~----------  148 (251)
T PRK07069         80 LSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRAS-QPASIVNISSVAAFKAEPDY----------  148 (251)
T ss_pred             ccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCcEEEEecChhhccCCCCC----------
Confidence            799999999765432    23345667788888    777777777776 67899999998765543221          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc-----CCcEEEEecCceecCCCCCCCC--chHHHHHHHHhcCCCCCCC
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC-----GIDMVVVNPSFVVGPLLAPQPT--STLLLILAMVKGLRGEYPN  218 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~i~Rp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~  218 (305)
                                 ..|+.+|...+.+.+.++.+.     +++++.++|+.+.++.......  ...........+.+     
T Consensus       149 -----------~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-----  212 (251)
T PRK07069        149 -----------TAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVP-----  212 (251)
T ss_pred             -----------chhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCC-----
Confidence                       559999999999998887653     4889999999998876432110  00111111111111     


Q ss_pred             CCccceeHHHHHHHHHHhhccc
Q 039049          219 TTVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       219 ~~~~~i~v~D~a~~~~~~~~~~  240 (305)
                       ...+.+++|++++++.++..+
T Consensus       213 -~~~~~~~~~va~~~~~l~~~~  233 (251)
T PRK07069        213 -LGRLGEPDDVAHAVLYLASDE  233 (251)
T ss_pred             -CCCCcCHHHHHHHHHHHcCcc
Confidence             234678999999999987654

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.86  E-value=7.1e-20  Score=152.22  Aligned_cols=219  Identities=15%  Similarity=0.129  Sum_probs=151.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|+||.++++.|++.|++|++++|+.......  .........++.++++|+.+.+++.++++       ++
T Consensus         9 k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~--~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   86 (252)
T PRK07035          9 KIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAV--ADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL   86 (252)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--HHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            6799999999999999999999999999999976433221  11111223357889999999888776654       57


Q ss_pred             CEEEEecccccc-----CCCCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           75 DGVFHTASPVLV-----PYDNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        75 d~Vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      |+|||+|+....     ....+.+...+++|+.++..+++++    ++. +.+++|++||.....+...           
T Consensus        87 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~~-----------  154 (252)
T PRK07035         87 DILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQ-GGGSIVNVASVNGVSPGDF-----------  154 (252)
T ss_pred             CEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCcEEEEECchhhcCCCCC-----------
Confidence            999999986431     1134456678999999999888776    333 5579999999754332111           


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                          .      ..|+.||.+.+.+++.++.++   |++++.+.|+.+..+........ ...........+      ...
T Consensus       155 ----~------~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~-~~~~~~~~~~~~------~~~  217 (252)
T PRK07035        155 ----Q------GIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKN-DAILKQALAHIP------LRR  217 (252)
T ss_pred             ----C------cchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCC-HHHHHHHHccCC------CCC
Confidence                1      569999999999999988664   79999999999876543221111 111112211111      234


Q ss_pred             ceeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          223 FVHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      +..++|+|+++..++.+...   +..+.+.++
T Consensus       218 ~~~~~~va~~~~~l~~~~~~~~~g~~~~~dgg  249 (252)
T PRK07035        218 HAEPSEMAGAVLYLASDASSYTTGECLNVDGG  249 (252)
T ss_pred             cCCHHHHHHHHHHHhCccccCccCCEEEeCCC
Confidence            67889999999999876533   334555443

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.86  E-value=8.6e-20  Score=151.87  Aligned_cols=220  Identities=15%  Similarity=0.141  Sum_probs=151.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|+||+++++.|++.|++|+++.|+.+.... .....+.....++..+++|+.|.+++.++++       ++
T Consensus         9 k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~-~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   87 (254)
T PRK06114          9 QVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLA-ETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGAL   87 (254)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHH-HHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            679999999999999999999999999999987642211 1111122223467889999999988887665       46


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |+||||||......    ..+.+...+++|+.++..+++++.    +. +.+++|++||...+.+.+..           
T Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~~-----------  155 (254)
T PRK06114         88 TLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLEN-GGGSIVNIASMSGIIVNRGL-----------  155 (254)
T ss_pred             CEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc-CCcEEEEECchhhcCCCCCC-----------
Confidence            99999999765322    345567789999999988877753    33 45689999997644322110           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                        +.      ..|+.+|.+.+.+.+.++.+   .++++.+++|+.+.++.....  .............+      ...+
T Consensus       156 --~~------~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~--~~~~~~~~~~~~~p------~~r~  219 (254)
T PRK06114        156 --LQ------AHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRP--EMVHQTKLFEEQTP------MQRM  219 (254)
T ss_pred             --Cc------chHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccc--cchHHHHHHHhcCC------CCCC
Confidence              01      55999999999998888765   489999999999988753211  11111111111111      2235


Q ss_pred             eeHHHHHHHHHHhhccccc---CceEEEec
Q 039049          224 VHIDDVVGAHILAMEETRA---SGRLICSS  250 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~~---~~~~~~~~  250 (305)
                      ..++|++.++++++.....   +..+.+.+
T Consensus       220 ~~~~dva~~~~~l~s~~~~~~tG~~i~~dg  249 (254)
T PRK06114        220 AKVDEMVGPAVFLLSDAASFCTGVDLLVDG  249 (254)
T ss_pred             cCHHHHHHHHHHHcCccccCcCCceEEECc
Confidence            6889999999999875332   33455544

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.86  E-value=5.4e-20  Score=153.63  Aligned_cols=219  Identities=15%  Similarity=0.125  Sum_probs=151.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|.||+++++.|++.|++|++++|+.+...+...   ..  ..++.++++|+.|.+++.++++       .+
T Consensus         7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~---~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   81 (261)
T PRK08265          7 KVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAA---SL--GERARFIATDITDDAAIERAVATVVARFGRV   81 (261)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---Hh--CCeeEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999998653322211   11  2368899999999988877764       57


Q ss_pred             CEEEEeccccccC---CCCchhhhhhhhhHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCCCcccCCCCCCCc
Q 039049           75 DGVFHTASPVLVP---YDNNIQATLIDPCIKGTLNVLSSCKKA--KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDP  149 (305)
Q Consensus        75 d~Vi~~a~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~  149 (305)
                      |++||||+.....   ...+.+...+++|+.++..+++.+...  .+..++|++||.....+.+..              
T Consensus        82 d~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~--------------  147 (261)
T PRK08265         82 DILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTGR--------------  147 (261)
T ss_pred             CEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCC--------------
Confidence            9999999975322   234566778899999999999876542  134689999997754432111              


Q ss_pred             ccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeH
Q 039049          150 DYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHI  226 (305)
Q Consensus       150 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  226 (305)
                             ..|+.+|...+.+.+.++.+.   ++++++++|+.+..+...................   ..+  ...+...
T Consensus       148 -------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~---~~p--~~r~~~p  215 (261)
T PRK08265        148 -------WLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAP---FHL--LGRVGDP  215 (261)
T ss_pred             -------chhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcc---cCC--CCCccCH
Confidence                   559999999999998887664   7999999999887664211100000011111100   011  2335789


Q ss_pred             HHHHHHHHHhhccccc---CceEEEecC
Q 039049          227 DDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       227 ~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      +|+|+++.++++....   +..+.+.|.
T Consensus       216 ~dva~~~~~l~s~~~~~~tG~~i~vdgg  243 (261)
T PRK08265        216 EEVAQVVAFLCSDAASFVTGADYAVDGG  243 (261)
T ss_pred             HHHHHHHHHHcCccccCccCcEEEECCC
Confidence            9999999999975432   334555443

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.86  E-value=1.1e-19  Score=151.25  Aligned_cols=219  Identities=12%  Similarity=0.032  Sum_probs=152.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++|+||||+|+||+++++.|++.|++|+++.|+.+........  ......++.++.+|+.|.+++.++++       ++
T Consensus        12 k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~--l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   89 (255)
T PRK06113         12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDE--IQQLGGQAFACRCDITSEQELSALADFALSKLGKV   89 (255)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH--HHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            6899999999999999999999999999998876543222111  11113367888999999988777553       57


Q ss_pred             CEEEEeccccccCC---CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCCCC
Q 039049           75 DGVFHTASPVLVPY---DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSD  148 (305)
Q Consensus        75 d~Vi~~a~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~  148 (305)
                      |+|||+|+......   ..+.+...+++|+.++.++++++...   .+..++|++||.....+...              
T Consensus        90 d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------  155 (255)
T PRK06113         90 DILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNIN--------------  155 (255)
T ss_pred             CEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCC--------------
Confidence            99999999754322   23455667899999999999998531   14458999999764322111              


Q ss_pred             cccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcccee
Q 039049          149 PDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVH  225 (305)
Q Consensus       149 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  225 (305)
                       .      ..|+.+|.+.+.+++.++.+   .+++++++.|+.+..+......  ............+      ...+..
T Consensus       156 -~------~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~--~~~~~~~~~~~~~------~~~~~~  220 (255)
T PRK06113        156 -M------TSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI--TPEIEQKMLQHTP------IRRLGQ  220 (255)
T ss_pred             -c------chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeccccccccccccc--CHHHHHHHHhcCC------CCCCcC
Confidence             1      55999999999999888755   4799999999998766432211  1112222222211      234679


Q ss_pred             HHHHHHHHHHhhccccc---CceEEEecC
Q 039049          226 IDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       226 v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      ++|+++++++++.....   +..+++.+.
T Consensus       221 ~~d~a~~~~~l~~~~~~~~~G~~i~~~gg  249 (255)
T PRK06113        221 PQDIANAALFLCSPAASWVSGQILTVSGG  249 (255)
T ss_pred             HHHHHHHHHHHcCccccCccCCEEEECCC
Confidence            99999999999975432   445677543

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.86  E-value=7.7e-20  Score=154.20  Aligned_cols=208  Identities=20%  Similarity=0.158  Sum_probs=146.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|+||+++++.|++.|++|++++|+.+......  ........++.++++|+.|.+++.++++       ++
T Consensus        11 k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   88 (278)
T PRK08277         11 KVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVV--AEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC   88 (278)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            67999999999999999999999999999999764332211  1111223368899999999888777654       68


Q ss_pred             CEEEEeccccccCC-------------------CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeec
Q 039049           75 DGVFHTASPVLVPY-------------------DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRY  131 (305)
Q Consensus        75 d~Vi~~a~~~~~~~-------------------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~  131 (305)
                      |+|||+|+...+..                   ..+.+...+++|+.++..+++.+.    +. +..+||++||...+.+
T Consensus        89 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~ii~isS~~~~~~  167 (278)
T PRK08277         89 DILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGR-KGGNIINISSMNAFTP  167 (278)
T ss_pred             CEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCcEEEEEccchhcCC
Confidence            99999999653321                   234567788999999987766543    33 4578999999876543


Q ss_pred             cCCCCCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCC----CchHHH
Q 039049          132 RHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQP----TSTLLL  204 (305)
Q Consensus       132 ~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~----~~~~~~  204 (305)
                      ....                     ..|+.+|.+.+.+++.++.++   ++++..++|+.+.++......    ......
T Consensus       168 ~~~~---------------------~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~  226 (278)
T PRK08277        168 LTKV---------------------PAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTER  226 (278)
T ss_pred             CCCC---------------------chhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhH
Confidence            2111                     559999999999999888775   799999999999887532110    000011


Q ss_pred             HHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhcc
Q 039049          205 ILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEE  239 (305)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  239 (305)
                      ........+      ...+...+|+|+++++++..
T Consensus       227 ~~~~~~~~p------~~r~~~~~dva~~~~~l~s~  255 (278)
T PRK08277        227 ANKILAHTP------MGRFGKPEELLGTLLWLADE  255 (278)
T ss_pred             HHHHhccCC------ccCCCCHHHHHHHHHHHcCc
Confidence            111111111      34467899999999998876

>PRK08324 short chain dehydrogenase; Validated

Probab=99.86  E-value=2e-20  Score=175.39  Aligned_cols=221  Identities=22%  Similarity=0.169  Sum_probs=155.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|+||+++++.|++.|++|++++|+..........  .... .++.++.+|+.|.+.+.++++       ++
T Consensus       423 k~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~--l~~~-~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~i  499 (681)
T PRK08324        423 KVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAE--LGGP-DRALGVACDVTDEAAVQAAFEEAALAFGGV  499 (681)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHH--Hhcc-CcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            6899999999999999999999999999999987543322111  1111 368899999999988877664       68


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCc-cEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSV-KRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      |+||||||......    ..+.+...+++|+.++.++++.+.    +. +. .+||++||..++.+.+..          
T Consensus       500 DvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-~~~g~iV~vsS~~~~~~~~~~----------  568 (681)
T PRK08324        500 DIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQ-GLGGSIVFIASKNAVNPGPNF----------  568 (681)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCcEEEEECCccccCCCCCc----------
Confidence            99999999765432    344567788999999999977764    33 33 689999998765432211          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCcee-cCCCCCCCCchHHHHHHHHhcCCC-----CC
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVV-GPLLAPQPTSTLLLILAMVKGLRG-----EY  216 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~-G~~~~~~~~~~~~~~~~~~~~~~~-----~~  216 (305)
                                 ..|+.+|.+.+.+++.++.+.   ++++++++|+.+| +.........   .......+...     .+
T Consensus       569 -----------~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~---~~~~~~~g~~~~~~~~~~  634 (681)
T PRK08324        569 -----------GAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWI---EARAAAYGLSEEELEEFY  634 (681)
T ss_pred             -----------HHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhh---hhhhhhccCChHHHHHHH
Confidence                       669999999999999987665   6999999999998 5532211100   00000111110     01


Q ss_pred             --CCCCccceeHHHHHHHHHHhhc--ccc-cCceEEEec
Q 039049          217 --PNTTVGFVHIDDVVGAHILAME--ETR-ASGRLICSS  250 (305)
Q Consensus       217 --~~~~~~~i~v~D~a~~~~~~~~--~~~-~~~~~~~~~  250 (305)
                        +...+.+++++|+|++++.++.  ... .+..+++++
T Consensus       635 ~~~~~l~~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdg  673 (681)
T PRK08324        635 RARNLLKREVTPEDVAEAVVFLASGLLSKTTGAIITVDG  673 (681)
T ss_pred             HhcCCcCCccCHHHHHHHHHHHhCccccCCcCCEEEECC
Confidence              1226789999999999999984  222 245688854

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.86  E-value=3.6e-20  Score=155.80  Aligned_cols=195  Identities=19%  Similarity=0.129  Sum_probs=142.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++|+||||+|.||+++++.|+++|++|++.+|+++.......  .    ..++.++.+|+.|++++.++++       ++
T Consensus         6 ~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~--~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (273)
T PRK07825          6 KVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAA--E----LGLVVGGPLDVTDPASFAAFLDAVEADLGPI   79 (273)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--H----hccceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999999997654332111  0    1147889999999988766553       57


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |++||+||......    ..+.....+++|+.++.++.+.+.    +. +.++||++||...+.+.+..           
T Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~-----------  147 (273)
T PRK07825         80 DVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPR-GRGHVVNVASLAGKIPVPGM-----------  147 (273)
T ss_pred             CEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCEEEEEcCccccCCCCCC-----------
Confidence            99999999865432    233456688999999888877764    34 66799999998654332111           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                                ..|+.+|...+.+.+.+..+   .|+++++++|+.+-.+.....            .+      .....+
T Consensus       148 ----------~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~------------~~------~~~~~~  199 (273)
T PRK07825        148 ----------ATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGT------------GG------AKGFKN  199 (273)
T ss_pred             ----------cchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccc------------cc------ccCCCC
Confidence                      56999999988877666544   489999999998865432110            00      012347


Q ss_pred             eeHHHHHHHHHHhhccccc
Q 039049          224 VHIDDVVGAHILAMEETRA  242 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~~  242 (305)
                      ++++|+|+.++.+++++..
T Consensus       200 ~~~~~va~~~~~~l~~~~~  218 (273)
T PRK07825        200 VEPEDVAAAIVGTVAKPRP  218 (273)
T ss_pred             CCHHHHHHHHHHHHhCCCC
Confidence            8999999999999987543

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.86  E-value=4.1e-20  Score=151.51  Aligned_cols=215  Identities=17%  Similarity=0.177  Sum_probs=152.8

Q ss_pred             EEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc---CCCEEEEec
Q 039049            5 CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ---GVDGVFHTA   81 (305)
Q Consensus         5 lItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~Vi~~a   81 (305)
                      +||||+|+||+++++.|+++|++|++++|+++.......  ... ...+++++.+|+.|.+++.++++   ++|++||++
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~--~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~a   77 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAAR--ALG-GGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITA   77 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--HHh-cCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECC
Confidence            699999999999999999999999999998643322111  111 13468899999999999998886   479999999


Q ss_pred             cccccCC----CCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccch
Q 039049           82 SPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNL  157 (305)
Q Consensus        82 ~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  157 (305)
                      +......    ..+.....+++|+.++.+++++.... +.+++|++||...+.+.+..                     .
T Consensus        78 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~g~iv~~ss~~~~~~~~~~---------------------~  135 (230)
T PRK07041         78 ADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIA-PGGSLTFVSGFAAVRPSASG---------------------V  135 (230)
T ss_pred             CCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhc-CCeEEEEECchhhcCCCCcc---------------------h
Confidence            9755421    34567778999999999999966554 66799999998765432211                     6


Q ss_pred             hHHHHHHHHHHHHHHHHHHc-CCcEEEEecCceecCCCCCCCCc-hHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHH
Q 039049          158 WYAYAKTIAEKEAWRIAKDC-GIDMVVVNPSFVVGPLLAPQPTS-TLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHIL  235 (305)
Q Consensus       158 ~Y~~sK~~~E~~~~~~~~~~-~~~~~i~Rp~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  235 (305)
                      .|+.+|.+.+.+.+.++.+. +++++.++|+.+-.+........ ....+.......+      ...+..++|+|++++.
T Consensus       136 ~Y~~sK~a~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dva~~~~~  209 (230)
T PRK07041        136 LQGAINAALEALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLP------ARRVGQPEDVANAILF  209 (230)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCC------CCCCcCHHHHHHHHHH
Confidence            69999999999999887664 68899999998866542211000 0111122221111      1234678999999999


Q ss_pred             hhccccc-CceEEEec
Q 039049          236 AMEETRA-SGRLICSS  250 (305)
Q Consensus       236 ~~~~~~~-~~~~~~~~  250 (305)
                      +++.... +..|++.+
T Consensus       210 l~~~~~~~G~~~~v~g  225 (230)
T PRK07041        210 LAANGFTTGSTVLVDG  225 (230)
T ss_pred             HhcCCCcCCcEEEeCC
Confidence            9986544 44677754

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.86  E-value=9.5e-20  Score=151.43  Aligned_cols=211  Identities=13%  Similarity=0.129  Sum_probs=146.3

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      +|+++||||+|+||+++++.|++.|++|+++.|+..........  ......++.++++|+.|++++.++++       +
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~--~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLE--IEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGR   78 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH--HHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            47899999999999999999999999999999986543322111  11112468899999999888877664       5


Q ss_pred             CCEEEEeccccccC----CCCchhhhhhhhhHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVP----YDNNIQATLIDPCIKGTLNVLSSCKK----AKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|+|||+||.....    .+.+.+...+++|+.++.++++++.+    .....++|++||...+.+....          
T Consensus        79 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~----------  148 (252)
T PRK07677         79 IDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGV----------  148 (252)
T ss_pred             ccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCC----------
Confidence            79999999864321    13445677899999999999998843    2123589999987532211110          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHH----cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD----CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTV  221 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (305)
                                 ..|+.+|...+.+.+.++.+    +|+++..++||.+.++.................+..+      ..
T Consensus       149 -----------~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~------~~  211 (252)
T PRK07677        149 -----------IHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVP------LG  211 (252)
T ss_pred             -----------cchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCC------CC
Confidence                       45999999999998887665    3799999999999854321111111122222222211      23


Q ss_pred             cceeHHHHHHHHHHhhccc
Q 039049          222 GFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~  240 (305)
                      .+...+|++.++.+++...
T Consensus       212 ~~~~~~~va~~~~~l~~~~  230 (252)
T PRK07677        212 RLGTPEEIAGLAYFLLSDE  230 (252)
T ss_pred             CCCCHHHHHHHHHHHcCcc
Confidence            4678899999999988653

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.86  E-value=7.8e-20  Score=151.26  Aligned_cols=215  Identities=16%  Similarity=0.132  Sum_probs=149.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|+||+++++.|+++|+.|++..|+.++....   ....  ..++.++.+|+.+.+++.++++       ++
T Consensus         7 ~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~---~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (245)
T PRK12936          7 RKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEAL---AAEL--GERVKIFPANLSDRDEVKALGQKAEADLEGV   81 (245)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHH---HHHh--CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            6899999999999999999999999998888875433221   1111  2367889999999888877653       58


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      |+|||+|+......    ..+.+...+++|+.++.++++++...   .+.++||++||...+++.+..            
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~------------  149 (245)
T PRK12936         82 DILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQ------------  149 (245)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCC------------
Confidence            99999999865321    23456778999999999998876431   155789999997655432211            


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccce
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFV  224 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  224 (305)
                               ..|+.+|...+.+++.++.+   .++++++++|+.+..+......   . .......+. .    ....+.
T Consensus       150 ---------~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~---~-~~~~~~~~~-~----~~~~~~  211 (245)
T PRK12936        150 ---------ANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLN---D-KQKEAIMGA-I----PMKRMG  211 (245)
T ss_pred             ---------cchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccC---h-HHHHHHhcC-C----CCCCCc
Confidence                     55999999988888777654   4799999999988665422111   0 111111111 1    133467


Q ss_pred             eHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          225 HIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       225 ~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      .++|+++++.+++.....   +..+++.++
T Consensus       212 ~~~~ia~~~~~l~~~~~~~~~G~~~~~~~g  241 (245)
T PRK12936        212 TGAEVASAVAYLASSEAAYVTGQTIHVNGG  241 (245)
T ss_pred             CHHHHHHHHHHHcCccccCcCCCEEEECCC
Confidence            899999999988865432   345777544

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.86  E-value=1e-19  Score=152.41  Aligned_cols=209  Identities=15%  Similarity=0.076  Sum_probs=149.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|+||++++++|+++|++|+++.|+.++......  .......++.++++|+.|.+++.++++       .+
T Consensus        11 k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~--~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   88 (265)
T PRK07097         11 KIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLA--AYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI   88 (265)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH--HHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            679999999999999999999999999999888654332211  111123368899999999998887764       47


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKK----AKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |+|||+||......    ..+.+...+++|+.++..+.+.+..    . +.++||++||.....+...            
T Consensus        89 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~------------  155 (265)
T PRK07097         89 DILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKK-GHGKIINICSMMSELGRET------------  155 (265)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-CCcEEEEEcCccccCCCCC------------
Confidence            99999999865421    3456677888999999988877643    3 5579999999754332111            


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCC-----chHHHHHHHHhcCCCCCCC
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPT-----STLLLILAMVKGLRGEYPN  218 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~  218 (305)
                         .      ..|+.+|...+.+.+.++.+.   +++++.++|+.+.++.......     ....+........+     
T Consensus       156 ---~------~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  221 (265)
T PRK07097        156 ---V------SAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTP-----  221 (265)
T ss_pred             ---C------ccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCC-----
Confidence               1      559999999999999988775   8999999999998875432110     00001111111111     


Q ss_pred             CCccceeHHHHHHHHHHhhccc
Q 039049          219 TTVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       219 ~~~~~i~v~D~a~~~~~~~~~~  240 (305)
                       ...+...+|+|..+..++...
T Consensus       222 -~~~~~~~~dva~~~~~l~~~~  242 (265)
T PRK07097        222 -AARWGDPEDLAGPAVFLASDA  242 (265)
T ss_pred             -ccCCcCHHHHHHHHHHHhCcc
Confidence             233678899999999999763

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.86  E-value=7.1e-20  Score=157.84  Aligned_cols=203  Identities=15%  Similarity=0.105  Sum_probs=144.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++|+||||+|+||+++++.|+++|++|++++|+.+.......  .......++.++++|+.|.+++.++++       .+
T Consensus         9 k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~--~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i   86 (334)
T PRK07109          9 QVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAA--EIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI   86 (334)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--HHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence            579999999999999999999999999999998654332211  111223468889999999998887754       68


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |++||+|+......    ..+.....+++|+.++.++.+.+    ++. +..+||++||...+.+.+..           
T Consensus        87 D~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~-~~g~iV~isS~~~~~~~~~~-----------  154 (334)
T PRK07109         87 DTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPR-DRGAIIQVGSALAYRSIPLQ-----------  154 (334)
T ss_pred             CEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEeCChhhccCCCcc-----------
Confidence            99999999754322    34455667888888776655544    444 55789999998765432211           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHH-----cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKD-----CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTV  221 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (305)
                                ..|+.+|...+.+.+.+..+     .++++++++|+.+.++....        ........    .....
T Consensus       155 ----------~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~--------~~~~~~~~----~~~~~  212 (334)
T PRK07109        155 ----------SAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDW--------ARSRLPVE----PQPVP  212 (334)
T ss_pred             ----------hHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhh--------hhhhcccc----ccCCC
Confidence                      66999999999888777654     36999999999987663211        11111110    11133


Q ss_pred             cceeHHHHHHHHHHhhccc
Q 039049          222 GFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~  240 (305)
                      .+..++|+|++++.+++++
T Consensus       213 ~~~~pe~vA~~i~~~~~~~  231 (334)
T PRK07109        213 PIYQPEVVADAILYAAEHP  231 (334)
T ss_pred             CCCCHHHHHHHHHHHHhCC
Confidence            4678999999999999875

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.86  E-value=6.5e-20  Score=152.06  Aligned_cols=198  Identities=16%  Similarity=0.128  Sum_probs=144.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|+||++++++|++.|++|++++|++.................++.++++|+.|.+++.++++       ++
T Consensus         3 k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   82 (248)
T PRK08251          3 QKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGGL   82 (248)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            78999999999999999999999999999999865433221111111113368889999999988776654       58


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |+|||+||......    ..+.....+++|+.++.++++.+.    +. +.++||++||.....+.+.            
T Consensus        83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~~------------  149 (248)
T PRK08251         83 DRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQ-GSGHLVLISSVSAVRGLPG------------  149 (248)
T ss_pred             CEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCeEEEEeccccccCCCC------------
Confidence            99999999765432    233445678999999999888764    34 5679999999765433210            


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                        +.      ..|+.||.+.+.+.+.+..+.   ++++++++|+.+.++.....             +.       ....
T Consensus       150 --~~------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~-------------~~-------~~~~  201 (248)
T PRK08251        150 --VK------AAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKA-------------KS-------TPFM  201 (248)
T ss_pred             --Cc------ccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcc-------------cc-------CCcc
Confidence              11      569999999999888777553   79999999999977642110             00       1125


Q ss_pred             eeHHHHHHHHHHhhccc
Q 039049          224 VHIDDVVGAHILAMEET  240 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~  240 (305)
                      +..+|.|+++..++++.
T Consensus       202 ~~~~~~a~~i~~~~~~~  218 (248)
T PRK08251        202 VDTETGVKALVKAIEKE  218 (248)
T ss_pred             CCHHHHHHHHHHHHhcC
Confidence            78999999999999864

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.86  E-value=8e-20  Score=152.00  Aligned_cols=219  Identities=15%  Similarity=0.101  Sum_probs=152.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++|+||||+|+||+++++.|++.|++|+++.|+++.......  .......++.++++|+.|.+++.++++       ++
T Consensus         8 k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   85 (253)
T PRK06172          8 KVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVA--LIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL   85 (253)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH--HHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999998754332211  112223468899999999888877664       46


Q ss_pred             CEEEEeccccccCC-----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           75 DGVFHTASPVLVPY-----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        75 d~Vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      |+|||+|+......     ..+.+...+++|+.++..+++.+.    +. +..++|++||...+.+.+..          
T Consensus        86 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~~sS~~~~~~~~~~----------  154 (253)
T PRK06172         86 DYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQ-GGGAIVNTASVAGLGAAPKM----------  154 (253)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEECchhhccCCCCC----------
Confidence            99999999753221     344567788999999987776543    33 45789999998765442211          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                                 ..|+.+|.+.+.+.+.++.++   ++++.++.|+.+-.+....................+      ...
T Consensus       155 -----------~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~  217 (253)
T PRK06172        155 -----------SIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHP------VGR  217 (253)
T ss_pred             -----------chhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCC------CCC
Confidence                       569999999999999888765   799999999998766432211101111111111111      223


Q ss_pred             ceeHHHHHHHHHHhhccccc--Cc-eEEEec
Q 039049          223 FVHIDDVVGAHILAMEETRA--SG-RLICSS  250 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  250 (305)
                      +..++|++..+++++.....  .| .+.+.+
T Consensus       218 ~~~p~~ia~~~~~l~~~~~~~~~G~~i~~dg  248 (253)
T PRK06172        218 IGKVEEVASAVLYLCSDGASFTTGHALMVDG  248 (253)
T ss_pred             ccCHHHHHHHHHHHhCccccCcCCcEEEECC
Confidence            57899999999999876432  33 355544

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=9.4e-20  Score=151.53  Aligned_cols=216  Identities=14%  Similarity=0.113  Sum_probs=147.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C-
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G-   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~-   73 (305)
                      |+|+||||+|+||+++++.|++.|++|++..++....  ...+....  ..++.++++|+.|++++.++++       . 
T Consensus         6 k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~--~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   81 (253)
T PRK08642          6 QTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDA--AEALADEL--GDRAIALQADVTDREQVQAMFATATEHFGKP   81 (253)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHH--HHHHHHHh--CCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            5799999999999999999999999998876543221  11111111  2368889999999888887765       2 


Q ss_pred             CCEEEEecccccc----------CCCCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcc
Q 039049           74 VDGVFHTASPVLV----------PYDNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSP  140 (305)
Q Consensus        74 ~d~Vi~~a~~~~~----------~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~  140 (305)
                      +|++||+|+....          ..+.+.+...+++|+.++.++++++...   .+..++|++||......         
T Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~---------  152 (253)
T PRK08642         82 ITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNP---------  152 (253)
T ss_pred             CeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCC---------
Confidence            8999999986321          1123455678999999999999988531   14568999998542111         


Q ss_pred             cCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCC
Q 039049          141 LNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYP  217 (305)
Q Consensus       141 ~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (305)
                            ..+.      ..|+.+|.+.|.+++.++.++   ++++..++||.+..+......  ............+    
T Consensus       153 ------~~~~------~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~--~~~~~~~~~~~~~----  214 (253)
T PRK08642        153 ------VVPY------HDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAAT--PDEVFDLIAATTP----  214 (253)
T ss_pred             ------CCCc------cchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccC--CHHHHHHHHhcCC----
Confidence                  0111      569999999999999998764   799999999998765322111  1111111211111    


Q ss_pred             CCCccceeHHHHHHHHHHhhccccc---CceEEEec
Q 039049          218 NTTVGFVHIDDVVGAHILAMEETRA---SGRLICSS  250 (305)
Q Consensus       218 ~~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~  250 (305)
                        ...+.+++|+++++.+++.....   +..+.+.+
T Consensus       215 --~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~vdg  248 (253)
T PRK08642        215 --LRKVTTPQEFADAVLFFASPWARAVTGQNLVVDG  248 (253)
T ss_pred             --cCCCCCHHHHHHHHHHHcCchhcCccCCEEEeCC
Confidence              24589999999999999975432   33455544

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.5e-19  Score=150.50  Aligned_cols=208  Identities=15%  Similarity=0.102  Sum_probs=145.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|.||.++++.|++.|++|++++|++++......  .......++.++.+|+.+++++.++++       .+
T Consensus         7 k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (254)
T PRK07478          7 KVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVA--EIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL   84 (254)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--HHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            589999999999999999999999999999998654332211  111223467889999999988877765       67


Q ss_pred             CEEEEeccccccC-----CCCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeec-cCCCCCCcccCCC
Q 039049           75 DGVFHTASPVLVP-----YDNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRY-RHDAQQVSPLNES  144 (305)
Q Consensus        75 d~Vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~-~~~~~~~~~~~E~  144 (305)
                      |++||+||.....     ...+.+...+++|+.++..+.+.+    ++. +.+++|++||...+.. .+.          
T Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~-~~~~iv~~sS~~~~~~~~~~----------  153 (254)
T PRK07478         85 DIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLAR-GGGSLIFTSTFVGHTAGFPG----------  153 (254)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEEechHhhccCCCC----------
Confidence            9999999975321     133556778999998888776654    344 5578999999764321 111          


Q ss_pred             CCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCc
Q 039049          145 HWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTV  221 (305)
Q Consensus       145 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (305)
                           .      ..|+.||.+.+.+.+.++.+.   +++++.++|+.+-.+........ ... ........   +  ..
T Consensus       154 -----~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~-~~~~~~~~---~--~~  215 (254)
T PRK07478        154 -----M------AAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDT-PEA-LAFVAGLH---A--LK  215 (254)
T ss_pred             -----c------chhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCC-HHH-HHHHHhcC---C--CC
Confidence                 0      569999999999999887764   69999999999977632211111 111 11111110   1  23


Q ss_pred             cceeHHHHHHHHHHhhccc
Q 039049          222 GFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~  240 (305)
                      .+..++|+++++++++...
T Consensus       216 ~~~~~~~va~~~~~l~s~~  234 (254)
T PRK07478        216 RMAQPEEIAQAALFLASDA  234 (254)
T ss_pred             CCcCHHHHHHHHHHHcCch
Confidence            4678999999999998754

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.85  E-value=2.1e-19  Score=148.80  Aligned_cols=207  Identities=15%  Similarity=0.134  Sum_probs=143.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |.++||||+|+||+++++.|++.|++|+++.+.... .....+........++..+.+|+.|.+++.++++       ++
T Consensus         4 k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   82 (246)
T PRK12938          4 RIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSP-RRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEI   82 (246)
T ss_pred             CEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChH-HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            579999999999999999999999999886543221 1111122222223467788999999988877664       57


Q ss_pred             CEEEEeccccccC----CCCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVP----YDNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |+|||||+.....    ...+.+...+++|+.++.++.+.+.    +. +.++||++||.....+...            
T Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~------------  149 (246)
T PRK12938         83 DVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVER-GWGRIINISSVNGQKGQFG------------  149 (246)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEEechhccCCCCC------------
Confidence            9999999976432    1345667789999999877766653    34 5679999999754322111            


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                         .      ..|+.+|...+.+.+.+.++   .++++++++|+.+.++......   ...+.......+      ...+
T Consensus       150 ---~------~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~---~~~~~~~~~~~~------~~~~  211 (246)
T PRK12938        150 ---Q------TNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIR---PDVLEKIVATIP------VRRL  211 (246)
T ss_pred             ---C------hhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcC---hHHHHHHHhcCC------ccCC
Confidence               1      56999999999888777654   4899999999999887533211   112222222211      3346


Q ss_pred             eeHHHHHHHHHHhhccc
Q 039049          224 VHIDDVVGAHILAMEET  240 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~  240 (305)
                      ..++|++.++++++..+
T Consensus       212 ~~~~~v~~~~~~l~~~~  228 (246)
T PRK12938        212 GSPDEIGSIVAWLASEE  228 (246)
T ss_pred             cCHHHHHHHHHHHcCcc
Confidence            78999999999988754

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.1e-19  Score=151.37  Aligned_cols=206  Identities=16%  Similarity=0.109  Sum_probs=140.8

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      +++|+||||+|+||+++++.|+++|++|++++|+.........  ..     ...++++|+.+.+++.++++       +
T Consensus         7 ~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~--~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~~~   79 (255)
T PRK06057          7 GRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAAD--EV-----GGLFVPTDVTDEDAVNALFDTAAETYGS   79 (255)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH--Hc-----CCcEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            3789999999999999999999999999999997653222111  11     12578899999988887775       5


Q ss_pred             CCEEEEeccccccC------CCCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCC
Q 039049           74 VDGVFHTASPVLVP------YDNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNE  143 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E  143 (305)
                      +|+|||+|+...+.      ...+.+...+++|+.++..+++.+.    +. +..++|++||.....+...         
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~~sS~~~~~g~~~---------  149 (255)
T PRK06057         80 VDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQ-GKGSIINTASFVAVMGSAT---------  149 (255)
T ss_pred             CCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHh-CCcEEEEEcchhhccCCCC---------
Confidence            79999999875421      1234467788999999988877764    33 4568999998643322100         


Q ss_pred             CCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCC
Q 039049          144 SHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTT  220 (305)
Q Consensus       144 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (305)
                           +.      ..|+.+|.+.+.+.+.++.+   .+++++++||+.+.++..................    ..+  .
T Consensus       150 -----~~------~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~----~~~--~  212 (255)
T PRK06057        150 -----SQ------ISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLV----HVP--M  212 (255)
T ss_pred             -----CC------cchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHh----cCC--C
Confidence                 01      45999998887777665443   3799999999999887543211111111111111    111  2


Q ss_pred             ccceeHHHHHHHHHHhhccc
Q 039049          221 VGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       221 ~~~i~v~D~a~~~~~~~~~~  240 (305)
                      ..+..++|+++++..++...
T Consensus       213 ~~~~~~~~~a~~~~~l~~~~  232 (255)
T PRK06057        213 GRFAEPEEIAAAVAFLASDD  232 (255)
T ss_pred             CCCcCHHHHHHHHHHHhCcc
Confidence            35789999999999888654

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.85  E-value=2.1e-20  Score=154.53  Aligned_cols=164  Identities=20%  Similarity=0.136  Sum_probs=125.0

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--------
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--------   72 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--------   72 (305)
                      ||+++||||+|+||+++++.|++.|++|++++|+..+..     .  .....++.++++|+.+.+++.++++        
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~-----~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   73 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSL-----A--AAAGERLAEVELDLSDAAAAAAWLAGDLLAAFV   73 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhh-----h--hccCCeEEEEEeccCCHHHHHHHHHHHHHHHhc
Confidence            889999999999999999999999999999999865321     1  1113368899999999888877432        


Q ss_pred             ---CCCEEEEeccccccCC-----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCccc
Q 039049           73 ---GVDGVFHTASPVLVPY-----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPL  141 (305)
Q Consensus        73 ---~~d~Vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~  141 (305)
                         .+|++||||+...+..     ..+.+...+++|+.++..+.+.+...   .+.+++|++||...+.+...       
T Consensus        74 ~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-------  146 (243)
T PRK07023         74 DGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAG-------  146 (243)
T ss_pred             cCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCC-------
Confidence               4689999999765321     23456778999999977776665432   14579999999875433211       


Q ss_pred             CCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH--cCCcEEEEecCceecC
Q 039049          142 NESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD--CGIDMVVVNPSFVVGP  192 (305)
Q Consensus       142 ~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~--~~~~~~i~Rp~~v~G~  192 (305)
                              .      ..|+.+|...|.+++.++.+  .++++.+++|+.+-.+
T Consensus       147 --------~------~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~  185 (243)
T PRK07023        147 --------W------SVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTG  185 (243)
T ss_pred             --------c------hHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence                    1      66999999999999988765  4899999999988554

>PRK08589 short chain dehydrogenase; Validated

Probab=99.85  E-value=1.3e-19  Score=152.33  Aligned_cols=223  Identities=16%  Similarity=0.117  Sum_probs=149.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|+++.|+ +...+.  .........++.++++|+.+.+++.++++       .+
T Consensus         7 k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   83 (272)
T PRK08589          7 KVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSET--VDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV   83 (272)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHH--HHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            689999999999999999999999999999998 332221  11122223468899999999988877664       47


Q ss_pred             CEEEEeccccccC-C----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVP-Y----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~-~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |++|||||..... .    ..+.+...+++|+.++..+.+.+...   .+ .++|++||...+.+.+..           
T Consensus        84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~-----------  151 (272)
T PRK08589         84 DVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYR-----------  151 (272)
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCCC-----------
Confidence            9999999976421 1    23445677889999998777775432   14 689999997754332111           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchH-HHHHHHHhcCCCCCCCCCcc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTL-LLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  222 (305)
                                ..|+.+|.+.+.+.+.++.++   |++++.+.||.+..+.......... ..............+  ...
T Consensus       152 ----------~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  219 (272)
T PRK08589        152 ----------SGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTP--LGR  219 (272)
T ss_pred             ----------chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCC--CCC
Confidence                      569999999999999887664   7999999999998764321110000 000000000000011  223


Q ss_pred             ceeHHHHHHHHHHhhccccc--Cc-eEEEecC
Q 039049          223 FVHIDDVVGAHILAMEETRA--SG-RLICSSS  251 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~~  251 (305)
                      +..++|+++++++++.....  .+ .+.+.+.
T Consensus       220 ~~~~~~va~~~~~l~s~~~~~~~G~~i~vdgg  251 (272)
T PRK08589        220 LGKPEEVAKLVVFLASDDSSFITGETIRIDGG  251 (272)
T ss_pred             CcCHHHHHHHHHHHcCchhcCcCCCEEEECCC
Confidence            67899999999999875432  33 3555443

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=1.7e-19  Score=150.24  Aligned_cols=217  Identities=16%  Similarity=0.164  Sum_probs=147.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|++.|++|+++.|+.+..  ...+..     .++.++++|+.|++++.++++       ++
T Consensus         8 k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~--~~~l~~-----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   80 (255)
T PRK06463          8 KVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE--AKELRE-----KGVFTIKCDVGNRDQVKKSKEVVEKEFGRV   80 (255)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH--HHHHHh-----CCCeEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            6899999999999999999999999999887764321  111111     147889999999988887764       57


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHH----HHhcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSS----CKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |+||||||......    ..+.+...+++|+.++..+.+.    +++. +.+++|++||...++....            
T Consensus        81 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~g~iv~isS~~~~~~~~~------------  147 (255)
T PRK06463         81 DVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLS-KNGAIVNIASNAGIGTAAE------------  147 (255)
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcCHHhCCCCCC------------
Confidence            99999999754321    3445677899999997666544    3434 4579999999765432100            


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCC-CchHHHHHHHHhcCCCCCCCCCcc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQP-TSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                        ..      ..|+.||.+.+.+.+.++.+   .+++++.++|+.+-.+...... ...............     ....
T Consensus       148 --~~------~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-----~~~~  214 (255)
T PRK06463        148 --GT------TFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKT-----VLKT  214 (255)
T ss_pred             --Cc------cHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCC-----CcCC
Confidence              01      55999999999999988865   4899999999988665421110 000001111111111     1345


Q ss_pred             ceeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          223 FVHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      +..++|+++++++++.....   +..+.+.+.
T Consensus       215 ~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg  246 (255)
T PRK06463        215 TGKPEDIANIVLFLASDDARYITGQVIVADGG  246 (255)
T ss_pred             CcCHHHHHHHHHHHcChhhcCCCCCEEEECCC
Confidence            67899999999999876432   344666543

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.6e-19  Score=154.31  Aligned_cols=183  Identities=17%  Similarity=0.092  Sum_probs=126.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccch-hhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKV-GFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      ++|+||||+|+||+++++.|+++|++|++++|+.+..... ..+... ....++.++++|+.|.+++.++++       +
T Consensus        17 k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~   95 (306)
T PRK06197         17 RVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAA-TPGADVTLQELDLTSLASVRAAADALRAAYPR   95 (306)
T ss_pred             CEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-CCCCceEEEECCCCCHHHHHHHHHHHHhhCCC
Confidence            6799999999999999999999999999999986543221 112111 112368899999999988877654       5


Q ss_pred             CCEEEEeccccccCC--CCchhhhhhhhhHHH----HHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           74 VDGVFHTASPVLVPY--DNNIQATLIDPCIKG----TLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~--~~~~~~~~~~~n~~~----~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      +|+||||||......  ..+.....+++|+.+    +..+++.+++. +.++||++||...+......  .....+..+.
T Consensus        96 iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~~~~iV~vSS~~~~~~~~~~--~~~~~~~~~~  172 (306)
T PRK06197         96 IDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPV-PGSRVVTVSSGGHRIRAAIH--FDDLQWERRY  172 (306)
T ss_pred             CCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhC-CCCEEEEECCHHHhccCCCC--ccccCcccCC
Confidence            799999999765432  344556678999999    55566666655 55799999998643311100  0111111111


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEE--ecCceecCCC
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVV--NPSFVVGPLL  194 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~--Rp~~v~G~~~  194 (305)
                      .+.      ..|+.||.+.+.+.+.++.+.   +++++++  .||.+..+..
T Consensus       173 ~~~------~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~  218 (306)
T PRK06197        173 NRV------AAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELA  218 (306)
T ss_pred             CcH------HHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCccc
Confidence            122      679999999999998887664   5666554  6998877643

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.85  E-value=6.6e-20  Score=150.95  Aligned_cols=199  Identities=19%  Similarity=0.192  Sum_probs=144.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++|+||||+|+||++++++|++.|++|++++|++.+......  ..... .++.++++|+.+.+++.++++       ++
T Consensus         7 ~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~--~l~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (237)
T PRK07326          7 KVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAA--ELNNK-GNVLGLAADVRDEADVQRAVDAIVAAFGGL   83 (237)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHH--HHhcc-CcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            579999999999999999999999999999998653322211  11111 468899999999988877665       68


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCCCcccCCCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA--KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSD  148 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~  148 (305)
                      |+|||+++......    ..+.....+++|+.++.++++++...  .+.+++|++||...+.+...              
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~--------------  149 (237)
T PRK07326         84 DVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFAG--------------  149 (237)
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCCC--------------
Confidence            99999998765321    33445678999999999998887542  14468999999764322111              


Q ss_pred             cccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcccee
Q 039049          149 PDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVH  225 (305)
Q Consensus       149 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  225 (305)
                       .      ..|+.+|.+.+.+.+.+..+   .+++++++||+.+.++.......            ..      ....+.
T Consensus       150 -~------~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~------------~~------~~~~~~  204 (237)
T PRK07326        150 -G------AAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPS------------EK------DAWKIQ  204 (237)
T ss_pred             -C------chHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccccc------------hh------hhccCC
Confidence             1      55999999999888777543   48999999999987764221100            00      011378


Q ss_pred             HHHHHHHHHHhhccccc
Q 039049          226 IDDVVGAHILAMEETRA  242 (305)
Q Consensus       226 v~D~a~~~~~~~~~~~~  242 (305)
                      .+|++++++.++..+..
T Consensus       205 ~~d~a~~~~~~l~~~~~  221 (237)
T PRK07326        205 PEDIAQLVLDLLKMPPR  221 (237)
T ss_pred             HHHHHHHHHHHHhCCcc
Confidence            99999999999987654

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.85  E-value=1.2e-19  Score=150.36  Aligned_cols=211  Identities=16%  Similarity=0.124  Sum_probs=142.3

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCC-CcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDP-EDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      ||+|+||||+|+||+++++.|++.|++|+++.++. +......  ........++.++++|+.+.+++.++++       
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETA--DAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFG   79 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH--HHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            46899999999999999999999999998775433 2222111  1111123468899999999888776653       


Q ss_pred             CCCEEEEeccccccCC-----CCchhhhhhhhhHHHHHHHHHHHHhcCC------ccEEEEeccceeeeccCCCCCCccc
Q 039049           73 GVDGVFHTASPVLVPY-----DNNIQATLIDPCIKGTLNVLSSCKKAKS------VKRVVLTSSCSSIRYRHDAQQVSPL  141 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~~------~~~~v~~SS~~~~~~~~~~~~~~~~  141 (305)
                      ++|+|||+||......     ..+.....+++|+.++..+++.+.....      -.+||++||...+.+....      
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~------  153 (248)
T PRK06947         80 RLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNE------  153 (248)
T ss_pred             CCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCC------
Confidence            5899999999764321     2334566789999999888765433201      2369999997654332110      


Q ss_pred             CCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCC
Q 039049          142 NESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPN  218 (305)
Q Consensus       142 ~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (305)
                              .      ..|+.+|.+.+.+++.++.+.   +++++++||+.+..+..... .. .......  +...  + 
T Consensus       154 --------~------~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~-~~-~~~~~~~--~~~~--~-  212 (248)
T PRK06947        154 --------Y------VDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASG-GQ-PGRAARL--GAQT--P-  212 (248)
T ss_pred             --------C------cccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCccccccccc-CC-HHHHHHH--hhcC--C-
Confidence                    0      349999999999988887664   79999999999988753221 11 1111111  1111  1 


Q ss_pred             CCccceeHHHHHHHHHHhhcccc
Q 039049          219 TTVGFVHIDDVVGAHILAMEETR  241 (305)
Q Consensus       219 ~~~~~i~v~D~a~~~~~~~~~~~  241 (305)
                       ..-...++|+++.+++++.++.
T Consensus       213 -~~~~~~~e~va~~~~~l~~~~~  234 (248)
T PRK06947        213 -LGRAGEADEVAETIVWLLSDAA  234 (248)
T ss_pred             -CCCCcCHHHHHHHHHHHcCccc
Confidence             1224678999999999988754

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=1.1e-19  Score=151.01  Aligned_cols=217  Identities=14%  Similarity=0.117  Sum_probs=150.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|+||+++++.|+++|++|+++.|+..+......  .......++.++++|+.+.+++.++++       .+
T Consensus         6 ~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~--~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (253)
T PRK08217          6 KVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVA--ECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL   83 (253)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--HHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            579999999999999999999999999999988654322211  111123467889999999887766554       47


Q ss_pred             CEEEEeccccccC-------------CCCchhhhhhhhhHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCC
Q 039049           75 DGVFHTASPVLVP-------------YDNNIQATLIDPCIKGTLNVLSSCKK----AKSVKRVVLTSSCSSIRYRHDAQQ  137 (305)
Q Consensus        75 d~Vi~~a~~~~~~-------------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~  137 (305)
                      |+|||+||.....             ...+.+...+++|+.++..+.+.+..    ...-.++|++||...++...    
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~----  159 (253)
T PRK08217         84 NGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNMG----  159 (253)
T ss_pred             CEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCCCC----
Confidence            9999999964421             12344566788999999877765432    21224799999876432211    


Q ss_pred             CcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCC
Q 039049          138 VSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRG  214 (305)
Q Consensus       138 ~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  214 (305)
                                  .      ..|+.+|.+.+.+++.++.+   .+++++.++|+.+.++......   .........+.+ 
T Consensus       160 ------------~------~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~---~~~~~~~~~~~~-  217 (253)
T PRK08217        160 ------------Q------TNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMK---PEALERLEKMIP-  217 (253)
T ss_pred             ------------C------chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC---HHHHHHHHhcCC-
Confidence                        1      56999999999999888765   5899999999999887543211   222222222222 


Q ss_pred             CCCCCCccceeHHHHHHHHHHhhccccc-CceEEEecC
Q 039049          215 EYPNTTVGFVHIDDVVGAHILAMEETRA-SGRLICSSS  251 (305)
Q Consensus       215 ~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~~~~~~  251 (305)
                           ...+.+++|+|+++..+++.... +..+++.+.
T Consensus       218 -----~~~~~~~~~~a~~~~~l~~~~~~~g~~~~~~gg  250 (253)
T PRK08217        218 -----VGRLGEPEEIAHTVRFIIENDYVTGRVLEIDGG  250 (253)
T ss_pred             -----cCCCcCHHHHHHHHHHHHcCCCcCCcEEEeCCC
Confidence                 34467999999999999976443 445777653

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.1e-19  Score=151.48  Aligned_cols=225  Identities=14%  Similarity=0.149  Sum_probs=147.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCc-ccchhhh-hhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPED-LSKVGFL-WELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~-~~~~~~~-~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      ++++||||+|+||+++++.|++.|++|+++.++... ......+ ........++.++++|+.+++++.++++       
T Consensus         9 k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   88 (257)
T PRK12744          9 KVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAFG   88 (257)
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhhC
Confidence            679999999999999999999999998888765432 1111111 1111123368889999999988887764       


Q ss_pred             CCCEEEEeccccccC----CCCchhhhhhhhhHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           73 GVDGVFHTASPVLVP----YDNNIQATLIDPCIKGTLNVLSSCKKAK-SVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      ++|++||+||.....    ...+.+...+++|+.++..+++++...- ...++++++|.......+.             
T Consensus        89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~~~-------------  155 (257)
T PRK12744         89 RPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFTPF-------------  155 (257)
T ss_pred             CCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccCCC-------------
Confidence            579999999975432    1344567789999999999999886531 1246666533221111110             


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccce
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFV  224 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  224 (305)
                        .      ..|+.+|.+.|.+.+.++.+.   ++++++++|+.+.++...+....  .... .........+.....+.
T Consensus       156 --~------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~  224 (257)
T PRK12744        156 --Y------SAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGA--EAVA-YHKTAAALSPFSKTGLT  224 (257)
T ss_pred             --c------ccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhcccccc--chhh-cccccccccccccCCCC
Confidence              0      569999999999999998775   69999999999987643221110  0000 00000000111123588


Q ss_pred             eHHHHHHHHHHhhcccc--cCceEEEec
Q 039049          225 HIDDVVGAHILAMEETR--ASGRLICSS  250 (305)
Q Consensus       225 ~v~D~a~~~~~~~~~~~--~~~~~~~~~  250 (305)
                      +++|++.++..+++...  .+..+++.+
T Consensus       225 ~~~dva~~~~~l~~~~~~~~g~~~~~~g  252 (257)
T PRK12744        225 DIEDIVPFIRFLVTDGWWITGQTILING  252 (257)
T ss_pred             CHHHHHHHHHHhhcccceeecceEeecC
Confidence            99999999999998521  244566654

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.7e-19  Score=150.84  Aligned_cols=208  Identities=19%  Similarity=0.179  Sum_probs=145.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|+||+++++.|+++|++|++++|+.........+   .....++.++++|+.+.+++.++++       .+
T Consensus         7 ~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~---~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   83 (263)
T PRK08226          7 KTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADEL---CGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRI   83 (263)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHH---HHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            6799999999999999999999999999999976422111111   1123467889999999888887765       57


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeee-ccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIR-YRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~-~~~~~~~~~~~~E~~~  146 (305)
                      |+|||+|+......    ..+.....+++|+.++.++++.+...   .+.+++|++||..... ..+.            
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~------------  151 (263)
T PRK08226         84 DILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPG------------  151 (263)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCC------------
Confidence            99999999754332    23345567899999999999886532   1456899999965311 1000            


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCC-----CCchHHHHHHHHhcCCCCCCC
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQ-----PTSTLLLILAMVKGLRGEYPN  218 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~  218 (305)
                         .      ..|+.+|...+.+.+.++.++   +++++.++|+.+.++.....     .......+.....+.+     
T Consensus       152 ---~------~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p-----  217 (263)
T PRK08226        152 ---E------TAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIP-----  217 (263)
T ss_pred             ---c------chHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCC-----
Confidence               0      559999999999998888664   79999999999988742210     0011112222222211     


Q ss_pred             CCccceeHHHHHHHHHHhhcc
Q 039049          219 TTVGFVHIDDVVGAHILAMEE  239 (305)
Q Consensus       219 ~~~~~i~v~D~a~~~~~~~~~  239 (305)
                       ...+..++|+++++.+++..
T Consensus       218 -~~~~~~~~~va~~~~~l~~~  237 (263)
T PRK08226        218 -LRRLADPLEVGELAAFLASD  237 (263)
T ss_pred             -CCCCCCHHHHHHHHHHHcCc
Confidence             23467899999999988864

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.2e-19  Score=151.39  Aligned_cols=208  Identities=15%  Similarity=0.152  Sum_probs=147.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++|+||||+|+||+++++.|++.|++|+++.|+.+........  ......++.++.+|+.+.+++.++++       ++
T Consensus        10 k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~--l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   87 (258)
T PRK06949         10 KVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAE--IEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGTI   87 (258)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH--HHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            7899999999999999999999999999999986543322111  11123368899999999888887765       57


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CC--------ccEEEEeccceeeeccCCCCCCc
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KS--------VKRVVLTSSCSSIRYRHDAQQVS  139 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~--------~~~~v~~SS~~~~~~~~~~~~~~  139 (305)
                      |+|||+|+......    ..+.+...+++|+.++.++++.+...   ..        ..++|++||...+...+.     
T Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-----  162 (258)
T PRK06949         88 DILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQ-----  162 (258)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCC-----
Confidence            99999999754321    23456778999999999998876421   01        358999999765432111     


Q ss_pred             ccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCC
Q 039049          140 PLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEY  216 (305)
Q Consensus       140 ~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  216 (305)
                                .      ..|+.+|.+.+.+++.++.+   .++++++++|+.++++........  ..... .... .  
T Consensus       163 ----------~------~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~--~~~~~-~~~~-~--  220 (258)
T PRK06949        163 ----------I------GLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWET--EQGQK-LVSM-L--  220 (258)
T ss_pred             ----------c------cHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccCh--HHHHH-HHhc-C--
Confidence                      1      56999999999999888766   489999999999998864321110  11111 1111 1  


Q ss_pred             CCCCccceeHHHHHHHHHHhhccc
Q 039049          217 PNTTVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       217 ~~~~~~~i~v~D~a~~~~~~~~~~  240 (305)
                      +  ...+...+|+++++.+++...
T Consensus       221 ~--~~~~~~p~~~~~~~~~l~~~~  242 (258)
T PRK06949        221 P--RKRVGKPEDLDGLLLLLAADE  242 (258)
T ss_pred             C--CCCCcCHHHHHHHHHHHhChh
Confidence            1  234677899999999998754

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.85  E-value=2.9e-19  Score=148.35  Aligned_cols=207  Identities=14%  Similarity=0.126  Sum_probs=146.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|.||+++++.|++.|++|++++|+.... ....+.   ....++.++++|+.|.+++.++++       ++
T Consensus         9 k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~-~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   84 (251)
T PRK12481          9 KVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPE-TQAQVE---ALGRKFHFITADLIQQKDIDSIVSQAVEVMGHI   84 (251)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHH-HHHHHH---HcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCC
Confidence            6799999999999999999999999999998864211 111111   123468899999999998887765       57


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA----KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |++|||||......    ..+.+...+++|+.++..+.+++...    +...++|++||...+.+....           
T Consensus        85 D~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~-----------  153 (251)
T PRK12481         85 DILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRV-----------  153 (251)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCC-----------
Confidence            99999999765432    34567788999999999888876432    123589999998765432211           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                                ..|+.||.+.+.+.+.++.+   +|+++..++||.+-.+..... ..............    +  ...+
T Consensus       154 ----------~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~----p--~~~~  216 (251)
T PRK12481        154 ----------PSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAAL-RADTARNEAILERI----P--ASRW  216 (251)
T ss_pred             ----------cchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhc-ccChHHHHHHHhcC----C--CCCC
Confidence                      45999999999999888765   489999999999876642211 00011111111111    1  2236


Q ss_pred             eeHHHHHHHHHHhhccc
Q 039049          224 VHIDDVVGAHILAMEET  240 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~  240 (305)
                      ...+|++.++.+++...
T Consensus       217 ~~peeva~~~~~L~s~~  233 (251)
T PRK12481        217 GTPDDLAGPAIFLSSSA  233 (251)
T ss_pred             cCHHHHHHHHHHHhCcc
Confidence            78999999999998753

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.9e-19  Score=150.34  Aligned_cols=221  Identities=14%  Similarity=0.063  Sum_probs=153.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCe-EEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHM-VRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      ++|+||||+|+||+++++.|++.|++ |+++.|+........  ........++.++.+|+.+++++.++++       +
T Consensus         7 k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~--~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   84 (260)
T PRK06198          7 KVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQA--AELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR   84 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH--HHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            67999999999999999999999998 999999764332211  1111123367889999999988877764       5


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA----KSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|+|||+|+......    ..+.+...+++|+.++.++++.+...    ....++|++||...+++.+..          
T Consensus        85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~----------  154 (260)
T PRK06198         85 LDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFL----------  154 (260)
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCc----------
Confidence            799999999764321    33445667899999999998887442    123579999998765432211          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCC----CCchHHHHHHHHhcCCCCCCC
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQ----PTSTLLLILAMVKGLRGEYPN  218 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~  218 (305)
                                 ..|+.+|...|.+.+.++.++   +++++.++|+.++++.....    ......++.......+     
T Consensus       155 -----------~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~-----  218 (260)
T PRK06198        155 -----------AAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQP-----  218 (260)
T ss_pred             -----------chhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCC-----
Confidence                       569999999999998887654   69999999999998753210    0011112222111111     


Q ss_pred             CCccceeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          219 TTVGFVHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       219 ~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                       ...+++++|+++++.+++.....   +..++..++
T Consensus       219 -~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~~~  253 (260)
T PRK06198        219 -FGRLLDPDEVARAVAFLLSDESGLMTGSVIDFDQS  253 (260)
T ss_pred             -ccCCcCHHHHHHHHHHHcChhhCCccCceEeECCc
Confidence             34578999999999999865432   334566543

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.6e-19  Score=153.11  Aligned_cols=198  Identities=14%  Similarity=0.109  Sum_probs=143.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++|+||||+|+||+++++.|+++|++|++++|+.+.......  ........+.++++|+.|.+++.++++       ++
T Consensus        41 k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~--~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  118 (293)
T PRK05866         41 KRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVAD--RITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV  118 (293)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--HHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            679999999999999999999999999999998654332211  111113357889999999998888776       68


Q ss_pred             CEEEEeccccccCCC------CchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCC
Q 039049           75 DGVFHTASPVLVPYD------NNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNES  144 (305)
Q Consensus        75 d~Vi~~a~~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~  144 (305)
                      |+||||||.......      .+.....+++|+.++.++++++.    +. +..++|++||.+++...            
T Consensus       119 d~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~------------  185 (293)
T PRK05866        119 DILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLER-GDGHIINVATWGVLSEA------------  185 (293)
T ss_pred             CEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcEEEEECChhhcCCC------------
Confidence            999999997654321      13345678999999888887653    44 56799999997543210            


Q ss_pred             CCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCc
Q 039049          145 HWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTV  221 (305)
Q Consensus       145 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (305)
                      .+.  .      ..|+.+|.+.+.+++.++.+.   ++++++++|+.+-.+......           ..      . ..
T Consensus       186 ~p~--~------~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~-----------~~------~-~~  239 (293)
T PRK05866        186 SPL--F------SVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTK-----------AY------D-GL  239 (293)
T ss_pred             CCC--c------chHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccccc-----------cc------c-CC
Confidence            000  1      569999999999988886654   899999999987665421100           00      0 12


Q ss_pred             cceeHHHHHHHHHHhhccc
Q 039049          222 GFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~  240 (305)
                      ..+..+++|+.++.++++.
T Consensus       240 ~~~~pe~vA~~~~~~~~~~  258 (293)
T PRK05866        240 PALTADEAAEWMVTAARTR  258 (293)
T ss_pred             CCCCHHHHHHHHHHHHhcC
Confidence            2478999999999999864

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.84  E-value=7.9e-20  Score=151.84  Aligned_cols=208  Identities=16%  Similarity=0.089  Sum_probs=140.7

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCC------
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGV------   74 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~------   74 (305)
                      ||+++||||+|+||+++++.|+++|++|++++|++.+.  ...+..  ....++.++++|+.|.+++.++++++      
T Consensus         1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~--~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (251)
T PRK06924          1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKE--LTKLAE--QYNSNLTFHSLDLQDVHELETNFNEILSSIQE   76 (251)
T ss_pred             CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHH--HHHHHh--ccCCceEEEEecCCCHHHHHHHHHHHHHhcCc
Confidence            88999999999999999999999999999999976321  111111  11346889999999998888877522      


Q ss_pred             -----CEEEEeccccccC-----CCCchhhhhhhhhHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCCCcc
Q 039049           75 -----DGVFHTASPVLVP-----YDNNIQATLIDPCIKGTLNVLSSCKK----AKSVKRVVLTSSCSSIRYRHDAQQVSP  140 (305)
Q Consensus        75 -----d~Vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~  140 (305)
                           .++||+||...+.     ...+.+...+++|+.++..+++.+..    .++.++||++||..+..+.+       
T Consensus        77 ~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-------  149 (251)
T PRK06924         77 DNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYF-------  149 (251)
T ss_pred             ccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCC-------
Confidence                 2789999875431     13455667788899987766665533    22346899999976432211       


Q ss_pred             cCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-----cCCcEEEEecCceecCCCCCC---CCchHHHHHHHHhcC
Q 039049          141 LNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD-----CGIDMVVVNPSFVVGPLLAPQ---PTSTLLLILAMVKGL  212 (305)
Q Consensus       141 ~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~i~Rp~~v~G~~~~~~---~~~~~~~~~~~~~~~  212 (305)
                              +.      ..|+.+|...+.+++.++.+     .++++..++|+.+-.+.....   .......+.......
T Consensus       150 --------~~------~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  215 (251)
T PRK06924        150 --------GW------SAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLK  215 (251)
T ss_pred             --------Cc------HHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHh
Confidence                    11      66999999999999888755     369999999998865531100   000000111111100


Q ss_pred             CCCCCCCCccceeHHHHHHHHHHhhcc
Q 039049          213 RGEYPNTTVGFVHIDDVVGAHILAMEE  239 (305)
Q Consensus       213 ~~~~~~~~~~~i~v~D~a~~~~~~~~~  239 (305)
                          +  ...+..++|+|+.++.++..
T Consensus       216 ----~--~~~~~~~~dva~~~~~l~~~  236 (251)
T PRK06924        216 ----E--EGKLLSPEYVAKALRNLLET  236 (251)
T ss_pred             ----h--cCCcCCHHHHHHHHHHHHhc
Confidence                0  12368999999999999886

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.84  E-value=2.5e-19  Score=149.05  Aligned_cols=218  Identities=15%  Similarity=0.156  Sum_probs=150.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|+||+++++.|++.|++|++..|+.+.......  .......++..+++|+.|++++.++++       ++
T Consensus        10 k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (253)
T PRK05867         10 KRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLAD--EIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI   87 (253)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH--HHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            679999999999999999999999999999998654332211  111223467889999999988877664       68


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CC-ccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KS-VKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~-~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |++|||||......    ..+.+...+++|+.++..+.+++...   .+ ..++|++||........             
T Consensus        88 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-------------  154 (253)
T PRK05867         88 DIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINV-------------  154 (253)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCC-------------
Confidence            99999999765332    34456677899999999999887532   12 24799998865321100             


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                      +...      ..|+.+|.+.+.+.+.++.++   |+++..++||.+-.+.....    ...........+      ...+
T Consensus       155 ~~~~------~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~----~~~~~~~~~~~~------~~r~  218 (253)
T PRK05867        155 PQQV------SHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPY----TEYQPLWEPKIP------LGRL  218 (253)
T ss_pred             CCCc------cchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccc----hHHHHHHHhcCC------CCCC
Confidence            0001      459999999999999887664   89999999999977643211    111111111111      2346


Q ss_pred             eeHHHHHHHHHHhhccccc---CceEEEec
Q 039049          224 VHIDDVVGAHILAMEETRA---SGRLICSS  250 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~~---~~~~~~~~  250 (305)
                      ..++|+|+++++++.....   +..+.+.+
T Consensus       219 ~~p~~va~~~~~L~s~~~~~~tG~~i~vdg  248 (253)
T PRK05867        219 GRPEELAGLYLYLASEASSYMTGSDIVIDG  248 (253)
T ss_pred             cCHHHHHHHHHHHcCcccCCcCCCeEEECC
Confidence            7899999999999975432   33455543

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.84  E-value=5.1e-19  Score=146.13  Aligned_cols=216  Identities=16%  Similarity=0.187  Sum_probs=146.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCc-ccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPED-LSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |++|||||+|+||+++++.|++.|++|+++.|+... ..+  ..........++.++.+|+.|++++.++++       +
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEA--WLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGP   78 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHH--HHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            579999999999999999999999999999883221 111  111111123468899999999888776654       5


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|+|||+||......    ..+.+...++.|+.++..+++.+    ++. +.+++|++||.....+...           
T Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~~~~~-----------  146 (242)
T TIGR01829        79 IDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRER-GWGRIINISSVNGQKGQFG-----------  146 (242)
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcchhhcCCCCC-----------
Confidence            799999999764321    33456667899999988765554    444 6679999999654322111           


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                          .      ..|+.+|...+.+++.++++   .+++++.++|+.+.++......   ...+.......+      ...
T Consensus       147 ----~------~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~---~~~~~~~~~~~~------~~~  207 (242)
T TIGR01829       147 ----Q------TNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMR---EDVLNSIVAQIP------VGR  207 (242)
T ss_pred             ----c------chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccc---hHHHHHHHhcCC------CCC
Confidence                0      55999999999888877654   3899999999999887543211   112222222211      223


Q ss_pred             ceeHHHHHHHHHHhhccccc---CceEEEec
Q 039049          223 FVHIDDVVGAHILAMEETRA---SGRLICSS  250 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~~---~~~~~~~~  250 (305)
                      +...+|+++++.+++..+..   +..+.+.+
T Consensus       208 ~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~g  238 (242)
T TIGR01829       208 LGRPEEIAAAVAFLASEEAGYITGATLSING  238 (242)
T ss_pred             CcCHHHHHHHHHHHcCchhcCccCCEEEecC
Confidence            56779999999888765432   33455544

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.84  E-value=7.1e-19  Score=146.52  Aligned_cols=216  Identities=19%  Similarity=0.108  Sum_probs=146.8

Q ss_pred             CcEEEeCCcc--hHHHHHHHHHHHcCCeEEEEEeCCCcc---------cchhhhhhccCccCceEEEEccCCCcchHHHH
Q 039049            2 PEYCVTGGTG--FIAAHLVKALLDKGHMVRTTVRDPEDL---------SKVGFLWELNGAEERLKIMKADLLMEGSFDEA   70 (305)
Q Consensus         2 ~~ilItG~~G--~iG~~l~~~l~~~g~~V~~~~r~~~~~---------~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~   70 (305)
                      ++|+||||+|  .||.+++++|+++|++|+++.|++.+.         ..............++.++++|+.+.+++.++
T Consensus         6 k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   85 (256)
T PRK12748          6 KIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPNRV   85 (256)
T ss_pred             cEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence            6799999996  699999999999999999999873211         11001111112234688999999998887665


Q ss_pred             hc-------CCCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCC
Q 039049           71 IQ-------GVDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQ  136 (305)
Q Consensus        71 ~~-------~~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~  136 (305)
                      ++       .+|+|||+|+......    ..+.+...+++|+.++.++++++...   .+.++||++||...+.+...  
T Consensus        86 ~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~--  163 (256)
T PRK12748         86 FYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMPD--  163 (256)
T ss_pred             HHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCCCC--
Confidence            54       4799999999754322    23445667899999999999887542   13468999999765443211  


Q ss_pred             CCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCC
Q 039049          137 QVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLR  213 (305)
Q Consensus       137 ~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~  213 (305)
                                   .      ..|+.+|.+.+.+++.++.+   .+++++.++|+.+..+....      .......... 
T Consensus       164 -------------~------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~------~~~~~~~~~~-  217 (256)
T PRK12748        164 -------------E------LAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITE------ELKHHLVPKF-  217 (256)
T ss_pred             -------------c------hHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCCh------hHHHhhhccC-
Confidence                         1      56999999999998887665   48999999999877654221      0111111111 


Q ss_pred             CCCCCCCccceeHHHHHHHHHHhhccccc---CceEEEec
Q 039049          214 GEYPNTTVGFVHIDDVVGAHILAMEETRA---SGRLICSS  250 (305)
Q Consensus       214 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~  250 (305)
                         +  ...+...+|+++++.+++.....   +..+++.+
T Consensus       218 ---~--~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~  252 (256)
T PRK12748        218 ---P--QGRVGEPVDAARLIAFLVSEEAKWITGQVIHSEG  252 (256)
T ss_pred             ---C--CCCCcCHHHHHHHHHHHhCcccccccCCEEEecC
Confidence               1  12245679999999988875332   33456643

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.84  E-value=3.2e-19  Score=153.19  Aligned_cols=205  Identities=16%  Similarity=0.102  Sum_probs=147.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++|+||||+|.||+++++.|+++|++|+++.|+.+...+...  .......++.++.+|+.|.+++.++++       ++
T Consensus         8 k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~--~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   85 (330)
T PRK06139          8 AVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAE--ECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI   85 (330)
T ss_pred             CEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--HHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            579999999999999999999999999999998754432211  111223467788999999998888763       57


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |++|||||......    ..+.....+++|+.++.++.+.+.    +. +..++|++||...+.+.+..           
T Consensus        86 D~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~-~~g~iV~isS~~~~~~~p~~-----------  153 (330)
T PRK06139         86 DVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQ-GHGIFINMISLGGFAAQPYA-----------  153 (330)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHc-CCCEEEEEcChhhcCCCCCc-----------
Confidence            99999999765432    234556689999999999877753    33 44689999997654332211           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHH----cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKD----CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                                ..|+.||...+.+.+.+..+    .+++++.+.|+.+.++........         .+...   .....
T Consensus       154 ----------~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~---------~~~~~---~~~~~  211 (330)
T PRK06139        154 ----------AAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANY---------TGRRL---TPPPP  211 (330)
T ss_pred             ----------hhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccc---------ccccc---cCCCC
Confidence                      56999999888877776654    279999999999988753221100         01000   01234


Q ss_pred             ceeHHHHHHHHHHhhccccc
Q 039049          223 FVHIDDVVGAHILAMEETRA  242 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~~  242 (305)
                      +++++|+|++++.+++++..
T Consensus       212 ~~~pe~vA~~il~~~~~~~~  231 (330)
T PRK06139        212 VYDPRRVAKAVVRLADRPRA  231 (330)
T ss_pred             CCCHHHHHHHHHHHHhCCCC
Confidence            67999999999999987543

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.84  E-value=3.6e-19  Score=147.85  Aligned_cols=195  Identities=15%  Similarity=0.138  Sum_probs=136.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC-CeEEEEEeCCCc-ccch-hhhhhccCccCceEEEEccCCCcchHHHHhc------
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG-HMVRTTVRDPED-LSKV-GFLWELNGAEERLKIMKADLLMEGSFDEAIQ------   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~r~~~~-~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   72 (305)
                      ++|+||||+|+||++++++|+++| ++|++++|+.+. .... ..+...  ...+++++++|+.|.+++.++++      
T Consensus         9 ~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~--~~~~v~~~~~D~~~~~~~~~~~~~~~~~g   86 (253)
T PRK07904          9 QTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAA--GASSVEVIDFDALDTDSHPKVIDAAFAGG   86 (253)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhc--CCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence            679999999999999999999985 899999998764 2221 112111  12368999999999887665443      


Q ss_pred             CCCEEEEeccccccCC--CCc--hhhhhhhhhHHHHHH----HHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCC
Q 039049           73 GVDGVFHTASPVLVPY--DNN--IQATLIDPCIKGTLN----VLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNES  144 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~~--~~~--~~~~~~~~n~~~~~~----l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~  144 (305)
                      ++|++||++|......  ..+  .....+++|+.++..    +++.+++. +..+||++||...+.+.+           
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~-~~~~iv~isS~~g~~~~~-----------  154 (253)
T PRK07904         87 DVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQ-GFGQIIAMSSVAGERVRR-----------  154 (253)
T ss_pred             CCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhc-CCceEEEEechhhcCCCC-----------
Confidence            6899999998864321  111  112468999988876    45555655 668999999975322110           


Q ss_pred             CCCCcccccccchhHHHHHHHHHHHHHHHHH---HcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCc
Q 039049          145 HWSDPDYCKHYNLWYAYAKTIAEKEAWRIAK---DCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTV  221 (305)
Q Consensus       145 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (305)
                          +.      ..|+.||.+...+.+.+..   .+++++++++|+.+..+.....             ..       ..
T Consensus       155 ----~~------~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~-------------~~-------~~  204 (253)
T PRK07904        155 ----SN------FVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHA-------------KE-------AP  204 (253)
T ss_pred             ----CC------cchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccC-------------CC-------CC
Confidence                01      4599999999877666543   4589999999999987632110             00       01


Q ss_pred             cceeHHHHHHHHHHhhccc
Q 039049          222 GFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~  240 (305)
                      ..+..+|+|+.++..+++.
T Consensus       205 ~~~~~~~~A~~i~~~~~~~  223 (253)
T PRK07904        205 LTVDKEDVAKLAVTAVAKG  223 (253)
T ss_pred             CCCCHHHHHHHHHHHHHcC
Confidence            1478999999999999865

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.84  E-value=2.5e-19  Score=149.85  Aligned_cols=210  Identities=18%  Similarity=0.132  Sum_probs=144.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|+||++++++|++.|++|+++.|+++......  ........++.++++|+.+.+++.++++       ++
T Consensus        10 k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~i   87 (264)
T PRK07576         10 KNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAV--AQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPI   87 (264)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--HHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            58999999999999999999999999999999865332211  1111112356788999999888877664       47


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCCCcccCCCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA--KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSD  148 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~  148 (305)
                      |+|||+|+......    ..+.+...+++|+.++.++++++...  +..+++|++||...+.+.+.              
T Consensus        88 D~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~~~--------------  153 (264)
T PRK07576         88 DVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMPM--------------  153 (264)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCCCC--------------
Confidence            99999998643221    34456667889999999999887542  12258999999754322111              


Q ss_pred             cccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcccee
Q 039049          149 PDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVH  225 (305)
Q Consensus       149 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  225 (305)
                             ...|+.+|...+.+++.+..+   .+++++.++|+.+.+....................  .  +  ...+..
T Consensus       154 -------~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~--~--~--~~~~~~  220 (264)
T PRK07576        154 -------QAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQS--V--P--LKRNGT  220 (264)
T ss_pred             -------ccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhc--C--C--CCCCCC
Confidence                   056999999999999888765   37999999999887532111000000011111111  1  1  344678


Q ss_pred             HHHHHHHHHHhhccc
Q 039049          226 IDDVVGAHILAMEET  240 (305)
Q Consensus       226 v~D~a~~~~~~~~~~  240 (305)
                      .+|+|++++.++..+
T Consensus       221 ~~dva~~~~~l~~~~  235 (264)
T PRK07576        221 KQDIANAALFLASDM  235 (264)
T ss_pred             HHHHHHHHHHHcChh
Confidence            999999999999753

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.83  E-value=5.4e-19  Score=132.10  Aligned_cols=203  Identities=17%  Similarity=0.173  Sum_probs=148.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      |||.|+||||.+|+++++...++||+|++++|++.+....          +++++++.|+.|.+.+.+.+.+.|+||..-
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~----------~~~~i~q~Difd~~~~a~~l~g~DaVIsA~   70 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR----------QGVTILQKDIFDLTSLASDLAGHDAVISAF   70 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc----------ccceeecccccChhhhHhhhcCCceEEEec
Confidence            6899999999999999999999999999999998865431          277899999999999999999999999987


Q ss_pred             cccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHHH
Q 039049           82 SPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAY  161 (305)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~  161 (305)
                      +...+.    +.    .........|++.++.+ +++|++.++..+..+-.+.     ..-.++|..|.      .+|..
T Consensus        71 ~~~~~~----~~----~~~~k~~~~li~~l~~a-gv~RllVVGGAGSL~id~g-----~rLvD~p~fP~------ey~~~  130 (211)
T COG2910          71 GAGASD----ND----ELHSKSIEALIEALKGA-GVPRLLVVGGAGSLEIDEG-----TRLVDTPDFPA------EYKPE  130 (211)
T ss_pred             cCCCCC----hh----HHHHHHHHHHHHHHhhc-CCeeEEEEcCccceEEcCC-----ceeecCCCCch------hHHHH
Confidence            775322    11    11123367788888888 9999999988776554322     11223333333      56888


Q ss_pred             HHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhcccc
Q 039049          162 AKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETR  241 (305)
Q Consensus       162 sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  241 (305)
                      ++..+|.+- .+..+..++|+.+-|+..|-|+.......        +.+........--++|+..|.|-+++.-++++.
T Consensus       131 A~~~ae~L~-~Lr~~~~l~WTfvSPaa~f~PGerTg~yr--------lggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~~  201 (211)
T COG2910         131 ALAQAEFLD-SLRAEKSLDWTFVSPAAFFEPGERTGNYR--------LGGDQLLVNAKGESRISYADYAIAVLDELEKPQ  201 (211)
T ss_pred             HHHHHHHHH-HHhhccCcceEEeCcHHhcCCccccCceE--------eccceEEEcCCCceeeeHHHHHHHHHHHHhccc
Confidence            998888543 23334469999999999999975443211        012222223335689999999999999999876


Q ss_pred             cC
Q 039049          242 AS  243 (305)
Q Consensus       242 ~~  243 (305)
                      ..
T Consensus       202 h~  203 (211)
T COG2910         202 HI  203 (211)
T ss_pred             cc
Confidence            53

>TIGR02415 23BDH acetoin reductases

Probab=99.83  E-value=6.1e-19  Score=146.75  Aligned_cols=211  Identities=17%  Similarity=0.113  Sum_probs=145.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|+||.++++.|++.|++|+++.|+........  ........++.++.+|+.|++++.++++       .+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~--~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i   78 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETA--KEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGF   78 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999998754322211  1112223468899999999998877654       57


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKK----AKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |+|||+|+......    ..+.+...+++|+.++..+++.+..    .+..+++|++||.....+.+..           
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-----------  147 (254)
T TIGR02415        79 DVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPIL-----------  147 (254)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCC-----------
Confidence            99999999754321    3345567899999999877766543    2123689999997654432211           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCch--------HHHHHHHHhcCCCC
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTST--------LLLILAMVKGLRGE  215 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~--------~~~~~~~~~~~~~~  215 (305)
                                ..|+.+|.+.+.+++.++.+.   ++++++++|+.+..+.........        ..........  ..
T Consensus       148 ----------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  215 (254)
T TIGR02415       148 ----------SAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSE--IA  215 (254)
T ss_pred             ----------cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhh--CC
Confidence                      669999999999998877664   799999999988665421100000        0000000000  00


Q ss_pred             CCCCCccceeHHHHHHHHHHhhcccc
Q 039049          216 YPNTTVGFVHIDDVVGAHILAMEETR  241 (305)
Q Consensus       216 ~~~~~~~~i~v~D~a~~~~~~~~~~~  241 (305)
                          ...+..++|+++++.++++...
T Consensus       216 ----~~~~~~~~~~a~~~~~l~~~~~  237 (254)
T TIGR02415       216 ----LGRPSEPEDVAGLVSFLASEDS  237 (254)
T ss_pred             ----CCCCCCHHHHHHHHHhhccccc
Confidence                2347889999999999998754

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.83  E-value=9e-19  Score=148.85  Aligned_cols=210  Identities=19%  Similarity=0.177  Sum_probs=147.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|.||.++++.|++.|++|++++|+.+.......  .. .....+..+++|+.|.+++.++++       ++
T Consensus        10 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~--~l-~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   86 (296)
T PRK05872         10 KVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAA--EL-GGDDRVLTVVADVTDLAAMQAAAEEAVERFGGI   86 (296)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--Hh-cCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            679999999999999999999999999999998654332211  11 112356677799999888877653       57


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCCCcccCCCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA--KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSD  148 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~  148 (305)
                      |+||||||......    ..+.+...+++|+.++.++++.+...  ....+||++||...+.+.+..             
T Consensus        87 d~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------------  153 (296)
T PRK05872         87 DVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAPGM-------------  153 (296)
T ss_pred             CEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCCCc-------------
Confidence            99999999865322    33456778999999999999887542  123589999998765432211             


Q ss_pred             cccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcccee
Q 039049          149 PDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVH  225 (305)
Q Consensus       149 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  225 (305)
                              ..|+.||...+.+.+.+..+   .++.++++.|+.+..+........ ...........+.    ....++.
T Consensus       154 --------~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~-~~~~~~~~~~~~~----p~~~~~~  220 (296)
T PRK05872        154 --------AAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADAD-LPAFRELRARLPW----PLRRTTS  220 (296)
T ss_pred             --------hHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhcccc-chhHHHHHhhCCC----cccCCCC
Confidence                    56999999999998887654   589999999999877643221111 0111111111111    1234678


Q ss_pred             HHHHHHHHHHhhccc
Q 039049          226 IDDVVGAHILAMEET  240 (305)
Q Consensus       226 v~D~a~~~~~~~~~~  240 (305)
                      ++|+++++..+++..
T Consensus       221 ~~~va~~i~~~~~~~  235 (296)
T PRK05872        221 VEKCAAAFVDGIERR  235 (296)
T ss_pred             HHHHHHHHHHHHhcC
Confidence            999999999999864

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.83  E-value=1.3e-18  Score=143.50  Aligned_cols=204  Identities=14%  Similarity=0.136  Sum_probs=144.6

Q ss_pred             EEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CCCE
Q 039049            4 YCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GVDG   76 (305)
Q Consensus         4 ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~   76 (305)
                      |+||||+|+||.++++.|+++|++|+++.|+.+.... ...........++.++++|+.|.+++.++++       .+|.
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~   79 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAE-SVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYG   79 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHH-HHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6899999999999999999999999999876432111 1111122223468899999999988877654       4699


Q ss_pred             EEEeccccccC----CCCchhhhhhhhhHHHHHHHHHHHH-----hcCCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           77 VFHTASPVLVP----YDNNIQATLIDPCIKGTLNVLSSCK-----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        77 Vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~-----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      +||+|+.....    ...+.+...+++|+.++.++++++.     +. +.++||++||...+.+.+..            
T Consensus        80 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~iv~vsS~~~~~~~~~~------------  146 (239)
T TIGR01831        80 VVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRAR-QGGRIITLASVSGVMGNRGQ------------  146 (239)
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhc-CCeEEEEEcchhhccCCCCC------------
Confidence            99999975432    1345677789999999999988652     23 44689999997755442211            


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccce
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFV  224 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  224 (305)
                               ..|+.+|.+.+.+.+.++.+   .+++++.++|+.+.++.....    ...........+      ...+.
T Consensus       147 ---------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----~~~~~~~~~~~~------~~~~~  207 (239)
T TIGR01831       147 ---------VNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEV----EHDLDEALKTVP------MNRMG  207 (239)
T ss_pred             ---------cchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhh----hHHHHHHHhcCC------CCCCC
Confidence                     55999999999888877655   489999999999987753221    111111211111      23457


Q ss_pred             eHHHHHHHHHHhhccc
Q 039049          225 HIDDVVGAHILAMEET  240 (305)
Q Consensus       225 ~v~D~a~~~~~~~~~~  240 (305)
                      ..+|+++++.+++...
T Consensus       208 ~~~~va~~~~~l~~~~  223 (239)
T TIGR01831       208 QPAEVASLAGFLMSDG  223 (239)
T ss_pred             CHHHHHHHHHHHcCch
Confidence            8899999999998854

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.83  E-value=7e-19  Score=147.02  Aligned_cols=209  Identities=12%  Similarity=0.062  Sum_probs=145.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhh-hhhccCccCceEEEEccCCCcchHHHHhc------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGF-LWELNGAEERLKIMKADLLMEGSFDEAIQ------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------~~   74 (305)
                      |+++||||+|.||+++++.|++.|++|++++|+.++...... +...  ...++.++++|+.|++++.++++      .+
T Consensus         9 k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i   86 (263)
T PRK08339          9 KLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSE--SNVDVSYIVADLTKREDLERTVKELKNIGEP   86 (263)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh--cCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence            579999999999999999999999999999998654332211 1111  13368899999999988887765      47


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |++||+||......    ..+.+...+++|+.+...+.+.+.    +. +..++|++||.....+.+..           
T Consensus        87 D~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~-~~g~Ii~isS~~~~~~~~~~-----------  154 (263)
T PRK08339         87 DIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERK-GFGRIIYSTSVAIKEPIPNI-----------  154 (263)
T ss_pred             cEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEcCccccCCCCcc-----------
Confidence            99999999754321    345677789999888777766653    33 55789999998753322111           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCC--------CCchHHHHHHHHhcCCCC
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQ--------PTSTLLLILAMVKGLRGE  215 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~--------~~~~~~~~~~~~~~~~~~  215 (305)
                                ..|+.+|...+.+.+.++.+.   |+++..+.|+.+..+.....        ..............  . 
T Consensus       155 ----------~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-  221 (263)
T PRK08339        155 ----------ALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKP--I-  221 (263)
T ss_pred             ----------hhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhcc--C-
Confidence                      559999999999998887764   79999999999876531100        00000111111111  1 


Q ss_pred             CCCCCccceeHHHHHHHHHHhhccc
Q 039049          216 YPNTTVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       216 ~~~~~~~~i~v~D~a~~~~~~~~~~  240 (305)
                       +  ...+..++|++.++.+++...
T Consensus       222 -p--~~r~~~p~dva~~v~fL~s~~  243 (263)
T PRK08339        222 -P--LGRLGEPEEIGYLVAFLASDL  243 (263)
T ss_pred             -C--cccCcCHHHHHHHHHHHhcch
Confidence             1  234678999999999998753

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.2e-18  Score=146.39  Aligned_cols=205  Identities=15%  Similarity=0.153  Sum_probs=142.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccc----hhhh-hhccCccCceEEEEccCCCcchHHHHhc----
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSK----VGFL-WELNGAEERLKIMKADLLMEGSFDEAIQ----   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~~-~~~~~~~~~~~~~~~D~~d~~~~~~~~~----   72 (305)
                      ++++||||+|+||+++++.|+++|++|+++.|+.+....    .... ........++.++++|+.+++++.++++    
T Consensus         7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   86 (273)
T PRK08278          7 KTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAVE   86 (273)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            579999999999999999999999999999997643211    1000 1111223468889999999998887765    


Q ss_pred             ---CCCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccC
Q 039049           73 ---GVDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLN  142 (305)
Q Consensus        73 ---~~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~  142 (305)
                         ++|+|||+||......    ..+.+...+++|+.++.++++++...   .+-.++|++||.......          
T Consensus        87 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~----------  156 (273)
T PRK08278         87 RFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPK----------  156 (273)
T ss_pred             HhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcccc----------
Confidence               6899999999765432    23455678899999999999998642   133578898875321110          


Q ss_pred             CCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCc-eecCCCCCCCCchHHHHHHHHhcCCCCCCC
Q 039049          143 ESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSF-VVGPLLAPQPTSTLLLILAMVKGLRGEYPN  218 (305)
Q Consensus       143 E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~-v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (305)
                         +..+.      ..|+.+|.+.|.+++.++.++   +++++.+.|+. +-.+.           ......+..     
T Consensus       157 ---~~~~~------~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~-----------~~~~~~~~~-----  211 (273)
T PRK08278        157 ---WFAPH------TAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAA-----------VRNLLGGDE-----  211 (273)
T ss_pred             ---ccCCc------chhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHH-----------HHhcccccc-----
Confidence               00111      569999999999999988765   79999999984 32221           111111110     


Q ss_pred             CCccceeHHHHHHHHHHhhcccc
Q 039049          219 TTVGFVHIDDVVGAHILAMEETR  241 (305)
Q Consensus       219 ~~~~~i~v~D~a~~~~~~~~~~~  241 (305)
                      ....+..++|+++.++.++....
T Consensus       212 ~~~~~~~p~~va~~~~~l~~~~~  234 (273)
T PRK08278        212 AMRRSRTPEIMADAAYEILSRPA  234 (273)
T ss_pred             cccccCCHHHHHHHHHHHhcCcc
Confidence            12346789999999999987643

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.83  E-value=1.3e-18  Score=144.73  Aligned_cols=207  Identities=12%  Similarity=0.081  Sum_probs=146.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|.||++++++|++.|++|++++|+... .....+..   ...++..+++|+.|.+++.++++       ++
T Consensus        11 k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~-~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   86 (253)
T PRK08993         11 KVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPT-ETIEQVTA---LGRRFLSLTADLRKIDGIPALLERAVAEFGHI   86 (253)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchH-HHHHHHHh---cCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            679999999999999999999999999988775421 11122211   13367889999999888887765       57


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CC-ccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KS-VKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~-~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |++|||||......    ..+.+...+++|+.++.++++++...   .+ -.++|++||...+.+....           
T Consensus        87 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----------  155 (253)
T PRK08993         87 DILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRV-----------  155 (253)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCC-----------
Confidence            99999999764332    34567889999999999999887542   11 2589999998765432211           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                                ..|+.+|.+.+.+.+.++.+   .+++++.++||.+-.+...... ............    .+  ..-+
T Consensus       156 ----------~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~-~~~~~~~~~~~~----~p--~~r~  218 (253)
T PRK08993        156 ----------PSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLR-ADEQRSAEILDR----IP--AGRW  218 (253)
T ss_pred             ----------cchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhc-cchHHHHHHHhc----CC--CCCC
Confidence                      45999999999999888766   4899999999999776432110 001111111111    11  2236


Q ss_pred             eeHHHHHHHHHHhhccc
Q 039049          224 VHIDDVVGAHILAMEET  240 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~  240 (305)
                      ...+|++..+.+++...
T Consensus       219 ~~p~eva~~~~~l~s~~  235 (253)
T PRK08993        219 GLPSDLMGPVVFLASSA  235 (253)
T ss_pred             cCHHHHHHHHHHHhCcc
Confidence            77899999999999754

>PRK12742 oxidoreductase; Provisional

Probab=99.83  E-value=1.6e-18  Score=142.66  Aligned_cols=204  Identities=18%  Similarity=0.175  Sum_probs=141.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc---CCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ---GVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~Vi   78 (305)
                      ++|+||||+|+||+++++.|+++|++|+++.|+...  ....+...    .++.++.+|+.|.+.+.+.++   ++|++|
T Consensus         7 k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~--~~~~l~~~----~~~~~~~~D~~~~~~~~~~~~~~~~id~li   80 (237)
T PRK12742          7 KKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKD--AAERLAQE----TGATAVQTDSADRDAVIDVVRKSGALDILV   80 (237)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHH--HHHHHHHH----hCCeEEecCCCCHHHHHHHHHHhCCCcEEE
Confidence            679999999999999999999999999887664321  11111111    135678899999888777665   489999


Q ss_pred             EeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCCCcccCCCCCCCccccc
Q 039049           79 HTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA-KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCK  153 (305)
Q Consensus        79 ~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~  153 (305)
                      |+||......    ..+.+...+++|+.++.+++..+... ...+++|++||.....        .+.      .+.   
T Consensus        81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~--------~~~------~~~---  143 (237)
T PRK12742         81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDR--------MPV------AGM---  143 (237)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccccc--------CCC------CCC---
Confidence            9999764321    34567889999999999998766543 1235899999965311        010      011   


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHH
Q 039049          154 HYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVV  230 (305)
Q Consensus       154 ~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  230 (305)
                         ..|+.+|.+.|.+++.++.+   .++++++++|+.+..+..... ..   .. ...... ..    ...+...+|++
T Consensus       144 ---~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~-~~---~~-~~~~~~-~~----~~~~~~p~~~a  210 (237)
T PRK12742        144 ---AAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPAN-GP---MK-DMMHSF-MA----IKRHGRPEEVA  210 (237)
T ss_pred             ---cchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccc-cH---HH-HHHHhc-CC----CCCCCCHHHHH
Confidence               56999999999999888765   479999999999987653211 11   11 111111 11    23357899999


Q ss_pred             HHHHHhhcccc
Q 039049          231 GAHILAMEETR  241 (305)
Q Consensus       231 ~~~~~~~~~~~  241 (305)
                      .++.+++....
T Consensus       211 ~~~~~l~s~~~  221 (237)
T PRK12742        211 GMVAWLAGPEA  221 (237)
T ss_pred             HHHHHHcCccc
Confidence            99999987543

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.83  E-value=9e-19  Score=146.77  Aligned_cols=204  Identities=19%  Similarity=0.177  Sum_probs=143.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|+++.|+.....           ..++.++++|+.|++++.++++       .+
T Consensus        10 k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   78 (266)
T PRK06171         10 KIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ-----------HENYQFVPTDVSSAEEVNHTVAEIIEKFGRI   78 (266)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc-----------cCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            67999999999999999999999999999998765332           1267889999999988877664       57


Q ss_pred             CEEEEeccccccC-------------CCCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCC
Q 039049           75 DGVFHTASPVLVP-------------YDNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQV  138 (305)
Q Consensus        75 d~Vi~~a~~~~~~-------------~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~  138 (305)
                      |+|||+||.....             ...+.+...+++|+.++..+++++...   .+..++|++||...+.+....   
T Consensus        79 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---  155 (266)
T PRK06171         79 DGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQ---  155 (266)
T ss_pred             CEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCC---
Confidence            9999999975321             133456678999999999999887643   134589999998654332111   


Q ss_pred             cccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCcee-cCCCCCCCC--------ch-HHHH
Q 039049          139 SPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVV-GPLLAPQPT--------ST-LLLI  205 (305)
Q Consensus       139 ~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~-G~~~~~~~~--------~~-~~~~  205 (305)
                                        ..|+.+|...+.+++.++.+   .++++++++|+.+- .+.......        .. ....
T Consensus       156 ------------------~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~  217 (266)
T PRK06171        156 ------------------SCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLR  217 (266)
T ss_pred             ------------------chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHH
Confidence                              56999999999999888766   48999999999874 221110000        00 0000


Q ss_pred             HHHHhcCCCCCCCCCccceeHHHHHHHHHHhhcccc
Q 039049          206 LAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETR  241 (305)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  241 (305)
                      ........  .+  ...+...+|+|.++.+++....
T Consensus       218 ~~~~~~~~--~p--~~r~~~~~eva~~~~fl~s~~~  249 (266)
T PRK06171        218 AGYTKTST--IP--LGRSGKLSEVADLVCYLLSDRA  249 (266)
T ss_pred             hhhccccc--cc--CCCCCCHHHhhhheeeeecccc
Confidence            11111001  11  2346788999999999987543

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.83  E-value=1.2e-18  Score=162.59  Aligned_cols=223  Identities=18%  Similarity=0.099  Sum_probs=148.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |++|||||+|+||+++++.|+++|++|++++|+..................++..+++|+.|.+++.++++       ++
T Consensus       415 kvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~i  494 (676)
T TIGR02632       415 RVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGV  494 (676)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            67999999999999999999999999999999865432221110000112356788999999998888775       68


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |+||||||......    ..+.+...+++|+.+...+.+.+.    +.+...+||++||...+.+.+..           
T Consensus       495 DilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~-----------  563 (676)
T TIGR02632       495 DIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNA-----------  563 (676)
T ss_pred             cEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCC-----------
Confidence            99999999765332    234456778899988877765443    33113589999997654432211           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCcee-cCCCCCCCCch---------HHHHHHHHhcCC
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVV-GPLLAPQPTST---------LLLILAMVKGLR  213 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~-G~~~~~~~~~~---------~~~~~~~~~~~~  213 (305)
                                ..|+.+|.+.+.+++.++.+.   +++++.++|+.++ |.+........         ...+......  
T Consensus       564 ----------~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  631 (676)
T TIGR02632       564 ----------SAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAK--  631 (676)
T ss_pred             ----------HHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHh--
Confidence                      679999999999999887763   7999999999887 33211100000         0000000000  


Q ss_pred             CCCCCCCccceeHHHHHHHHHHhhccccc---CceEEEec
Q 039049          214 GEYPNTTVGFVHIDDVVGAHILAMEETRA---SGRLICSS  250 (305)
Q Consensus       214 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~  250 (305)
                         ......+++++|+|+++.+++.....   +..+++.|
T Consensus       632 ---r~~l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDG  668 (676)
T TIGR02632       632 ---RTLLKRHIFPADIAEAVFFLASSKSEKTTGCIITVDG  668 (676)
T ss_pred             ---cCCcCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECC
Confidence               11135578999999999998864322   34567754

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.83  E-value=8.5e-19  Score=146.38  Aligned_cols=208  Identities=14%  Similarity=0.065  Sum_probs=139.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCc-ccch-hhhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPED-LSKV-GFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~-~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      |+++||||+++||+++++.|++.|++|+++.|+... .... ..+..  ....++.++++|+.|++++.++++       
T Consensus         9 k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   86 (260)
T PRK08416          9 KTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQ--KYGIKAKAYPLNILEPETYKELFKKIDEDFD   86 (260)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHH--hcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            689999999999999999999999999888765332 1111 11111  113368899999999988877664       


Q ss_pred             CCCEEEEecccccc------C----CCCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCC
Q 039049           73 GVDGVFHTASPVLV------P----YDNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQV  138 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~------~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~  138 (305)
                      ++|++||||+....      .    ...+.....+++|+.+...+.+.+.    +. +.+++|++||.......+..   
T Consensus        87 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~---  162 (260)
T PRK08416         87 RVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKV-GGGSIISLSSTGNLVYIENY---  162 (260)
T ss_pred             CccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhcc-CCEEEEEEeccccccCCCCc---
Confidence            57999999986421      0    1234456678888887776655543    33 44689999996532221110   


Q ss_pred             cccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCC
Q 039049          139 SPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGE  215 (305)
Q Consensus       139 ~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  215 (305)
                                        ..|+.+|.+.+.+.+.++.++   |+++..+.||.+-.+...... .............+  
T Consensus       163 ------------------~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~-~~~~~~~~~~~~~~--  221 (260)
T PRK08416        163 ------------------AGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFT-NYEEVKAKTEELSP--  221 (260)
T ss_pred             ------------------ccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhcc-CCHHHHHHHHhcCC--
Confidence                              459999999999999988775   899999999988665321110 00111111111111  


Q ss_pred             CCCCCccceeHHHHHHHHHHhhccc
Q 039049          216 YPNTTVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       216 ~~~~~~~~i~v~D~a~~~~~~~~~~  240 (305)
                          ...+..++|++.++++++...
T Consensus       222 ----~~r~~~p~~va~~~~~l~~~~  242 (260)
T PRK08416        222 ----LNRMGQPEDLAGACLFLCSEK  242 (260)
T ss_pred             ----CCCCCCHHHHHHHHHHHcChh
Confidence                233678999999999998754

>PRK06484 short chain dehydrogenase; Validated

Probab=99.83  E-value=5.8e-19  Score=161.75  Aligned_cols=218  Identities=16%  Similarity=0.139  Sum_probs=153.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|.||+++++.|+++|++|+++.|+.+......   ...  ..++..+++|+.|++++.++++       .+
T Consensus       270 k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~---~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  344 (520)
T PRK06484        270 RVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLA---EAL--GDEHLSVQADITDEAAVESAFAQIQARWGRL  344 (520)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHh--CCceeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            67999999999999999999999999999999765333221   111  2356778999999988887764       47


Q ss_pred             CEEEEeccccccC-----CCCchhhhhhhhhHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCCCcccCCCCCCC
Q 039049           75 DGVFHTASPVLVP-----YDNNIQATLIDPCIKGTLNVLSSCKKA-KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSD  148 (305)
Q Consensus        75 d~Vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~  148 (305)
                      |++|||||.....     ...+.+...+++|+.++.++.+.+... .+..+||++||...+.+.+..             
T Consensus       345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------------  411 (520)
T PRK06484        345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALPPR-------------  411 (520)
T ss_pred             CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCCCC-------------
Confidence            9999999975321     134566778999999999999887653 133589999998754432211             


Q ss_pred             cccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcccee
Q 039049          149 PDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVH  225 (305)
Q Consensus       149 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  225 (305)
                              ..|+.+|...+.+.+.++.++   +++++.++|+.+.++.................+..+      ...+..
T Consensus       412 --------~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~  477 (520)
T PRK06484        412 --------NAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIP------LGRLGD  477 (520)
T ss_pred             --------chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCC------CCCCcC
Confidence                    569999999999999887664   799999999999887532111000111112222111      223578


Q ss_pred             HHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          226 IDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       226 v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      ++|+|+++++++....   .+..+.+.+.
T Consensus       478 ~~dia~~~~~l~s~~~~~~~G~~i~vdgg  506 (520)
T PRK06484        478 PEEVAEAIAFLASPAASYVNGATLTVDGG  506 (520)
T ss_pred             HHHHHHHHHHHhCccccCccCcEEEECCC
Confidence            9999999999987542   2334556543

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.82  E-value=3e-18  Score=141.05  Aligned_cols=210  Identities=12%  Similarity=0.099  Sum_probs=144.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|+++.|++....  ..+..     .++.++.+|+.|.+++.++++       ++
T Consensus         3 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   75 (236)
T PRK06483          3 APILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI--DGLRQ-----AGAQCIQADFSTNAGIMAFIDELKQHTDGL   75 (236)
T ss_pred             ceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH--HHHHH-----cCCEEEEcCCCCHHHHHHHHHHHHhhCCCc
Confidence            58999999999999999999999999999999865321  11111     146788999999888777653       47


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CC--ccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KS--VKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~--~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      |++||+||......    ..+.+...+++|+.++..+.+.+...   .+  ..++|++||.....+.+.           
T Consensus        76 d~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~-----------  144 (236)
T PRK06483         76 RAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDK-----------  144 (236)
T ss_pred             cEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCC-----------
Confidence            99999999753321    34567788999999998877766442   12  358999998653222111           


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC--GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                          .      ..|+.+|...+.+++.++.++  ++++..++|+.+..+...     ............+      ..-+
T Consensus       145 ----~------~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~-----~~~~~~~~~~~~~------~~~~  203 (236)
T PRK06483        145 ----H------IAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGD-----DAAYRQKALAKSL------LKIE  203 (236)
T ss_pred             ----C------ccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCC-----CHHHHHHHhccCc------cccC
Confidence                0      559999999999999998875  599999999988533211     1111112222111      1124


Q ss_pred             eeHHHHHHHHHHhhcccccCc-eEEEec
Q 039049          224 VHIDDVVGAHILAMEETRASG-RLICSS  250 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~~~~-~~~~~~  250 (305)
                      ...+|+++++.++++.....+ .+.+.|
T Consensus       204 ~~~~~va~~~~~l~~~~~~~G~~i~vdg  231 (236)
T PRK06483        204 PGEEEIIDLVDYLLTSCYVTGRSLPVDG  231 (236)
T ss_pred             CCHHHHHHHHHHHhcCCCcCCcEEEeCc
Confidence            578999999999997443333 344543

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.82  E-value=2.4e-18  Score=144.12  Aligned_cols=212  Identities=17%  Similarity=0.096  Sum_probs=142.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|+||+++++.|+++|++|++++|+.++...............++..+++|+.|.+++.++++       .+
T Consensus         9 k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   88 (265)
T PRK07062          9 RVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFGGV   88 (265)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            56999999999999999999999999999999876443221111111112367889999999988877654       57


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |++|||||......    ..+.+...+++|+.+...+.+.+.    +. +..++|++||.....+.+..           
T Consensus        89 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~-----------  156 (265)
T PRK07062         89 DMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRAS-AAASIVCVNSLLALQPEPHM-----------  156 (265)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc-CCcEEEEeccccccCCCCCc-----------
Confidence            99999999754321    234566778889888777776653    33 45689999997654322110           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCC-------CchHHHHHHHHhcCCCCC
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQP-------TSTLLLILAMVKGLRGEY  216 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~-------~~~~~~~~~~~~~~~~~~  216 (305)
                                ..|+.+|...+.+.+.++.+   .|++++.++|+.+..+......       .....+..........  
T Consensus       157 ----------~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  224 (265)
T PRK07062        157 ----------VATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGI--  224 (265)
T ss_pred             ----------hHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCC--
Confidence                      55999999999888877665   4799999999998766421100       0000111111111111  


Q ss_pred             CCCCccceeHHHHHHHHHHhhcc
Q 039049          217 PNTTVGFVHIDDVVGAHILAMEE  239 (305)
Q Consensus       217 ~~~~~~~i~v~D~a~~~~~~~~~  239 (305)
                      +  ...+...+|++.++.+++..
T Consensus       225 p--~~r~~~p~~va~~~~~L~s~  245 (265)
T PRK07062        225 P--LGRLGRPDEAARALFFLASP  245 (265)
T ss_pred             C--cCCCCCHHHHHHHHHHHhCc
Confidence            1  23467889999999998875

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1.2e-18  Score=145.70  Aligned_cols=202  Identities=17%  Similarity=0.169  Sum_probs=144.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc------CCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ------GVD   75 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------~~d   75 (305)
                      ++++||||+|+||++++++|+++|++|++++|+.........  .. ....++.++++|+.|.+++.++++      ++|
T Consensus         6 ~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id   82 (263)
T PRK09072          6 KRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAA--RL-PYPGRHRWVVADLTSEAGREAVLARAREMGGIN   82 (263)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--HH-hcCCceEEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence            679999999999999999999999999999998654332211  11 123478899999999988777654      579


Q ss_pred             EEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCCCC
Q 039049           76 GVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSD  148 (305)
Q Consensus        76 ~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~  148 (305)
                      +|||+||......    ..+.....+++|+.++.++++.+...   .+.+++|++||.....+.+..             
T Consensus        83 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-------------  149 (263)
T PRK09072         83 VLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGY-------------  149 (263)
T ss_pred             EEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCc-------------
Confidence            9999999765321    23445668889999999999887542   144689999887543322110             


Q ss_pred             cccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcccee
Q 039049          149 PDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVH  225 (305)
Q Consensus       149 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  225 (305)
                              ..|+.+|...+.+++.++.++   +++++.+.|+.+.++.....        .......   .   ......
T Consensus       150 --------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~--------~~~~~~~---~---~~~~~~  207 (263)
T PRK09072        150 --------ASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEA--------VQALNRA---L---GNAMDD  207 (263)
T ss_pred             --------cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhh--------ccccccc---c---cCCCCC
Confidence                    569999999998888887653   79999999998865532110        0000000   0   123578


Q ss_pred             HHHHHHHHHHhhcccc
Q 039049          226 IDDVVGAHILAMEETR  241 (305)
Q Consensus       226 v~D~a~~~~~~~~~~~  241 (305)
                      ++|+|++++.++++..
T Consensus       208 ~~~va~~i~~~~~~~~  223 (263)
T PRK09072        208 PEDVAAAVLQAIEKER  223 (263)
T ss_pred             HHHHHHHHHHHHhCCC
Confidence            8999999999999753

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.82  E-value=4.5e-19  Score=151.70  Aligned_cols=181  Identities=17%  Similarity=0.090  Sum_probs=131.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchh-hhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVG-FLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      ++++||||+|+||.++++.|++.|++|++++|+.++..+.. .+... ....++.++++|+.|.+++.++++       .
T Consensus        15 k~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~-~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~~   93 (313)
T PRK05854         15 KRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTA-VPDAKLSLRALDLSSLASVAALGEQLRAEGRP   93 (313)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-CCCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence            68999999999999999999999999999999876433221 12111 112368899999999988877654       4


Q ss_pred             CCEEEEeccccccCC---CCchhhhhhhhhHHHHHHHHHHHHh---cCCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           74 VDGVFHTASPVLVPY---DNNIQATLIDPCIKGTLNVLSSCKK---AKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      +|++|||||......   ..+..+..+.+|+.+...+.+.+..   . +..++|++||.....+...   ...+.+....
T Consensus        94 iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~-~~~riv~vsS~~~~~~~~~---~~~~~~~~~~  169 (313)
T PRK05854         94 IHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRA-GRARVTSQSSIAARRGAIN---WDDLNWERSY  169 (313)
T ss_pred             ccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHh-CCCCeEEEechhhcCCCcC---cccccccccC
Confidence            799999999865422   3466777899999998888877652   2 3458999999865443211   0222222222


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHH-----cCCcEEEEecCceecCC
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKD-----CGIDMVVVNPSFVVGPL  193 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~i~Rp~~v~G~~  193 (305)
                      .+.      ..|+.||.+.+.+.+.++++     .++.+..+.||.+..+.
T Consensus       170 ~~~------~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~  214 (313)
T PRK05854        170 AGM------RAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNL  214 (313)
T ss_pred             cch------hhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCc
Confidence            222      66999999999999888754     36999999999997664

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.82  E-value=3.3e-18  Score=142.92  Aligned_cols=210  Identities=13%  Similarity=0.052  Sum_probs=142.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|.||+++++.|++.|++|++..|+...... ...........++.++.+|+.|.+++.++++       ++
T Consensus         8 k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~-~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~i   86 (261)
T PRK08936          8 KVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEAN-DVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGTL   86 (261)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHH-HHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            789999999999999999999999999988886432111 1111111123467788999999988777664       57


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHH----HHhcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSS----CKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |++||+|+......    ..+.+...+++|+.++..+.+.    +.+...-+++|++||...+.+.+.            
T Consensus        87 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~------------  154 (261)
T PRK08936         87 DVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPL------------  154 (261)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCC------------
Confidence            99999999765432    2345666789998887765554    344312358999999653322111            


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                         .      ..|+.+|.+.+.+.+.++.+.   +++++.++|+.+..+........ ...........+      ...+
T Consensus       155 ---~------~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~------~~~~  218 (261)
T PRK08936        155 ---F------VHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFAD-PKQRADVESMIP------MGYI  218 (261)
T ss_pred             ---C------cccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCC-HHHHHHHHhcCC------CCCC
Confidence               1      569999999888887776554   89999999999988753321111 111111111111      2346


Q ss_pred             eeHHHHHHHHHHhhccc
Q 039049          224 VHIDDVVGAHILAMEET  240 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~  240 (305)
                      ...+|+++.+.+++...
T Consensus       219 ~~~~~va~~~~~l~s~~  235 (261)
T PRK08936        219 GKPEEIAAVAAWLASSE  235 (261)
T ss_pred             cCHHHHHHHHHHHcCcc
Confidence            78899999999998754

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1.5e-18  Score=145.91  Aligned_cols=208  Identities=16%  Similarity=0.070  Sum_probs=141.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccC-ceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEE-RLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |+++||||+|+||+++++.|++.|++|++++|+.+......  ........ .+.++++|+.|++++.++++       +
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~--~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTV--ADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGS   78 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--HHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            57999999999999999999999999999998764332211  11111111 24567899999887776554       4


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKK----AKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|+|||+||......    ..+.+...+++|+.++.++++++..    .+...++|++||...+.+.+..          
T Consensus        79 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~----------  148 (272)
T PRK07832         79 MDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWH----------  148 (272)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCC----------
Confidence            799999999754321    3445677899999999999998642    1123689999997543221110          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHH---HcCCcEEEEecCceecCCCCCCCC----chHHHHHHHHhcCCCCCCC
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAK---DCGIDMVVVNPSFVVGPLLAPQPT----STLLLILAMVKGLRGEYPN  218 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~i~Rp~~v~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~  218 (305)
                                 ..|+.+|...+.+.+.++.   ..++++++++|+.+.++.......    ............       
T Consensus       149 -----------~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-------  210 (272)
T PRK07832        149 -----------AAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDR-------  210 (272)
T ss_pred             -----------cchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHh-------
Confidence                       4599999988887766654   358999999999999875332100    000000111000       


Q ss_pred             CCccceeHHHHHHHHHHhhcc
Q 039049          219 TTVGFVHIDDVVGAHILAMEE  239 (305)
Q Consensus       219 ~~~~~i~v~D~a~~~~~~~~~  239 (305)
                      .....+..+|+|.+++.++++
T Consensus       211 ~~~~~~~~~~vA~~~~~~~~~  231 (272)
T PRK07832        211 FRGHAVTPEKAAEKILAGVEK  231 (272)
T ss_pred             cccCCCCHHHHHHHHHHHHhc
Confidence            012358999999999999964

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.82  E-value=1.9e-18  Score=144.51  Aligned_cols=207  Identities=19%  Similarity=0.157  Sum_probs=144.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|+||++++++|++.|++|++++|+.++....   ...  ...++.++++|+.|.+++.++++       .+
T Consensus         7 k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   81 (263)
T PRK06200          7 QVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASL---RQR--FGDHVLVVEGDVTSYADNQRAVDQTVDAFGKL   81 (263)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHH--hCCcceEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            6899999999999999999999999999999986543221   111  12357889999999888777654       57


Q ss_pred             CEEEEeccccccCC-----CCc----hhhhhhhhhHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCCCcccCC
Q 039049           75 DGVFHTASPVLVPY-----DNN----IQATLIDPCIKGTLNVLSSCKKA--KSVKRVVLTSSCSSIRYRHDAQQVSPLNE  143 (305)
Q Consensus        75 d~Vi~~a~~~~~~~-----~~~----~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~E  143 (305)
                      |++||+||......     ..+    .+...+++|+.++..+++++...  ....++|++||...+.+....        
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~--------  153 (263)
T PRK06200         82 DCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGGG--------  153 (263)
T ss_pred             CEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCC--------
Confidence            99999999753210     111    25567899999999988887542  122589999998765432211        


Q ss_pred             CCCCCcccccccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEecCceecCCCCCCCC--------chHHHHHHHHhcCC
Q 039049          144 SHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC--GIDMVVVNPSFVVGPLLAPQPT--------STLLLILAMVKGLR  213 (305)
Q Consensus       144 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~i~Rp~~v~G~~~~~~~~--------~~~~~~~~~~~~~~  213 (305)
                                   ..|+.+|.+.+.+.+.++.+.  ++++..+.|+.+..+.......        ..... ....... 
T Consensus       154 -------------~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-  218 (263)
T PRK06200        154 -------------PLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGL-ADMIAAI-  218 (263)
T ss_pred             -------------chhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccch-hHHhhcC-
Confidence                         559999999999999888764  5999999999997764321100        00000 1111111 


Q ss_pred             CCCCCCCccceeHHHHHHHHHHhhccc
Q 039049          214 GEYPNTTVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       214 ~~~~~~~~~~i~v~D~a~~~~~~~~~~  240 (305)
                      .  +  ...+..++|++.++.+++...
T Consensus       219 ~--p--~~r~~~~~eva~~~~fl~s~~  241 (263)
T PRK06200        219 T--P--LQFAPQPEDHTGPYVLLASRR  241 (263)
T ss_pred             C--C--CCCCCCHHHHhhhhhheeccc
Confidence            1  1  344788999999999998754

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.82  E-value=2.3e-18  Score=140.37  Aligned_cols=190  Identities=12%  Similarity=0.074  Sum_probs=139.8

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-----CCC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-----GVD   75 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----~~d   75 (305)
                      |++++||||+|+||++++++|++.|++|++++|+.+.....   ..     .+++++++|+.+.+.+.++++     ++|
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~---~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~~d   72 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAAL---QA-----LGAEALALDVADPASVAGLAWKLDGEALD   72 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHH---Hh-----ccceEEEecCCCHHHHHHHHHHhcCCCCC
Confidence            88999999999999999999999999999999986543221   11     145788999999988887642     489


Q ss_pred             EEEEeccccccC------CCCchhhhhhhhhHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           76 GVFHTASPVLVP------YDNNIQATLIDPCIKGTLNVLSSCKKA--KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        76 ~Vi~~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      +|||+++.....      .+.+.+...+++|+.++.++++++...  ....++|++||.....+...      .      
T Consensus        73 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~------~------  140 (222)
T PRK06953         73 AAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDAT------G------  140 (222)
T ss_pred             EEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCccccccccc------C------
Confidence            999999986322      134566789999999999999988652  12347899988654332110      0      


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHHc-CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeH
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKDC-GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHI  226 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  226 (305)
                      .+.      ..|+.+|...+.+++.++.++ +++++.++|+.+..+....                        ...+..
T Consensus       141 ~~~------~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~~------------------------~~~~~~  190 (222)
T PRK06953        141 TTG------WLYRASKAALNDALRAASLQARHATCIALHPGWVRTDMGGA------------------------QAALDP  190 (222)
T ss_pred             CCc------cccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCCCC------------------------CCCCCH
Confidence            000      349999999999999887665 7899999999988764210                        113566


Q ss_pred             HHHHHHHHHhhccc
Q 039049          227 DDVVGAHILAMEET  240 (305)
Q Consensus       227 ~D~a~~~~~~~~~~  240 (305)
                      ++.++.+..++...
T Consensus       191 ~~~~~~~~~~~~~~  204 (222)
T PRK06953        191 AQSVAGMRRVIAQA  204 (222)
T ss_pred             HHHHHHHHHHHHhc
Confidence            78888887776644

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.82  E-value=3.4e-18  Score=142.97  Aligned_cols=210  Identities=18%  Similarity=0.137  Sum_probs=146.2

Q ss_pred             CcEEEeCCcc-hHHHHHHHHHHHcCCeEEEEEeCCCcccchhh-hhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            2 PEYCVTGGTG-FIAAHLVKALLDKGHMVRTTVRDPEDLSKVGF-LWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~~G-~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      ++++||||+| .||+++++.|+++|++|++..|+..+...... +.... ...++.++++|+.+++.+.++++       
T Consensus        18 k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   96 (262)
T PRK07831         18 KVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAEL-GLGRVEAVVCDVTSEAQVDALIDAAVERLG   96 (262)
T ss_pred             CEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhc-CCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            6899999998 69999999999999999999887654332211 11101 11367889999999888877664       


Q ss_pred             CCCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CC-ccEEEEeccceeeeccCCCCCCcccCCC
Q 039049           73 GVDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KS-VKRVVLTSSCSSIRYRHDAQQVSPLNES  144 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~-~~~~v~~SS~~~~~~~~~~~~~~~~~E~  144 (305)
                      ++|+||||||......    ..+.+...+++|+.++..+++.+...   .+ ..++|++||...+.....          
T Consensus        97 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~----------  166 (262)
T PRK07831         97 RLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHG----------  166 (262)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCC----------
Confidence            5799999999754321    23456678889999999888876432   12 458899888653221111          


Q ss_pred             CCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCc
Q 039049          145 HWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTV  221 (305)
Q Consensus       145 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (305)
                           .      ..|+.+|.+.+.+.+.++.+   ++++++.++|+.+..+......  ............+      ..
T Consensus       167 -----~------~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~--~~~~~~~~~~~~~------~~  227 (262)
T PRK07831        167 -----Q------AHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVT--SAELLDELAAREA------FG  227 (262)
T ss_pred             -----C------cchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCccccccc--CHHHHHHHHhcCC------CC
Confidence                 1      55999999999999998866   4899999999999887532211  1112222222211      23


Q ss_pred             cceeHHHHHHHHHHhhcccc
Q 039049          222 GFVHIDDVVGAHILAMEETR  241 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~~  241 (305)
                      -+..++|+++++++++....
T Consensus       228 r~~~p~~va~~~~~l~s~~~  247 (262)
T PRK07831        228 RAAEPWEVANVIAFLASDYS  247 (262)
T ss_pred             CCcCHHHHHHHHHHHcCchh
Confidence            36788999999999987643

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.81  E-value=2.5e-18  Score=141.80  Aligned_cols=199  Identities=14%  Similarity=0.070  Sum_probs=138.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCc--chHHHHh--------
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME--GSFDEAI--------   71 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~--~~~~~~~--------   71 (305)
                      ++++||||+|+||+++++.|++.|++|++++|+++.......... ......+.++++|+.+.  +.+.+++        
T Consensus         7 k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~~   85 (239)
T PRK08703          7 KTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIV-EAGHPEPFAIRFDLMSAEEKEFEQFAATIAEATQ   85 (239)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHH-HcCCCCcceEEeeecccchHHHHHHHHHHHHHhC
Confidence            679999999999999999999999999999998754332211100 11122467788998753  3344332        


Q ss_pred             cCCCEEEEeccccccC-----CCCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCC
Q 039049           72 QGVDGVFHTASPVLVP-----YDNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNE  143 (305)
Q Consensus        72 ~~~d~Vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E  143 (305)
                      .++|+|||+||.....     ...+.+...+++|+.++.++++.+...   .+..++|++||.....+.+.         
T Consensus        86 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~---------  156 (239)
T PRK08703         86 GKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAY---------  156 (239)
T ss_pred             CCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCC---------
Confidence            4679999999965321     123455667899999998888877442   14568999998653221110         


Q ss_pred             CCCCCcccccccchhHHHHHHHHHHHHHHHHHHc----CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCC
Q 039049          144 SHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC----GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNT  219 (305)
Q Consensus       144 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (305)
                            .      ..|+.+|...+.+++.++.+.    ++++++++||.++++......           .+.      .
T Consensus       157 ------~------~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~-----------~~~------~  207 (239)
T PRK08703        157 ------W------GGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSH-----------PGE------A  207 (239)
T ss_pred             ------c------cchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccC-----------CCC------C
Confidence                  0      459999999999998887764    599999999999988532110           010      0


Q ss_pred             CccceeHHHHHHHHHHhhcc
Q 039049          220 TVGFVHIDDVVGAHILAMEE  239 (305)
Q Consensus       220 ~~~~i~v~D~a~~~~~~~~~  239 (305)
                      ...+...+|++.++.+++..
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~  227 (239)
T PRK08703        208 KSERKSYGDVLPAFVWWASA  227 (239)
T ss_pred             ccccCCHHHHHHHHHHHhCc
Confidence            22357899999999999973

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.81  E-value=2.1e-18  Score=138.13  Aligned_cols=188  Identities=20%  Similarity=0.149  Sum_probs=139.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc---CCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ---GVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~Vi   78 (305)
                      |+++||||+|.||+++++.|+++ ++|++++|+..                   .+++|+.|.++++++++   ++|+||
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-------------------~~~~D~~~~~~~~~~~~~~~~id~lv   60 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-------------------DVQVDITDPASIRALFEKVGKVDAVV   60 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-------------------ceEecCCChHHHHHHHHhcCCCCEEE
Confidence            47999999999999999999999 99999988642                   35789999998888776   689999


Q ss_pred             EeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCCCcccCCCCCCCccccc
Q 039049           79 HTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA-KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCK  153 (305)
Q Consensus        79 ~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~  153 (305)
                      |+||......    ..+.+...+++|+.++.++++++... ....+|+++||.....+.+..                  
T Consensus        61 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~~~------------------  122 (199)
T PRK07578         61 SAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIPGG------------------  122 (199)
T ss_pred             ECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCCCCc------------------
Confidence            9999754332    33456777899999999999887642 123579999986543221110                  


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHH--cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHH
Q 039049          154 HYNLWYAYAKTIAEKEAWRIAKD--CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVG  231 (305)
Q Consensus       154 ~~~~~Y~~sK~~~E~~~~~~~~~--~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  231 (305)
                         ..|+.+|...+.+.+.++.+  .++++..++|+.+-.+..            ..  +..  ++  ...++.++|+|+
T Consensus       123 ---~~Y~~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~------------~~--~~~--~~--~~~~~~~~~~a~  181 (199)
T PRK07578        123 ---ASAATVNGALEGFVKAAALELPRGIRINVVSPTVLTESLE------------KY--GPF--FP--GFEPVPAARVAL  181 (199)
T ss_pred             ---hHHHHHHHHHHHHHHHHHHHccCCeEEEEEcCCcccCchh------------hh--hhc--CC--CCCCCCHHHHHH
Confidence               56999999999999888775  489999999998743321            00  000  11  123689999999


Q ss_pred             HHHHhhcccccCceEEE
Q 039049          232 AHILAMEETRASGRLIC  248 (305)
Q Consensus       232 ~~~~~~~~~~~~~~~~~  248 (305)
                      ++..+++....+..|++
T Consensus       182 ~~~~~~~~~~~g~~~~~  198 (199)
T PRK07578        182 AYVRSVEGAQTGEVYKV  198 (199)
T ss_pred             HHHHHhccceeeEEecc
Confidence            99999987655555553

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.81  E-value=3e-18  Score=142.98  Aligned_cols=209  Identities=17%  Similarity=0.061  Sum_probs=139.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|.||+++++.|+++|++|++++|+++...+...  .+.. ..++.++++|+.|.+++.++++       ++
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~--~l~~-~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~i   77 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALK--ELKE-YGEVYAVKADLSDKDDLKNLVKEAWELLGGI   77 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH--HHHh-cCCceEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            589999999999999999999999999999998654322211  1111 1367889999999988887664       58


Q ss_pred             CEEEEeccccccC------CCCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCC
Q 039049           75 DGVFHTASPVLVP------YDNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNES  144 (305)
Q Consensus        75 d~Vi~~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~  144 (305)
                      |+|||+||.....      ...+.+...+.+|+.++..+...+    .+..+..+||++||.....+.+.          
T Consensus        78 d~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~----------  147 (259)
T PRK08340         78 DALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPP----------  147 (259)
T ss_pred             CEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCC----------
Confidence            9999999975321      122334445677877765554432    22214468999999865322111          


Q ss_pred             CCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCC--------chHH-HHHHHHhcC
Q 039049          145 HWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPT--------STLL-LILAMVKGL  212 (305)
Q Consensus       145 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~--------~~~~-~~~~~~~~~  212 (305)
                           .      ..|+.+|...+.+.+.++.++   |+++..+.|+.+-.+.......        .... ........ 
T Consensus       148 -----~------~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  215 (259)
T PRK08340        148 -----L------VLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLER-  215 (259)
T ss_pred             -----c------hHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhcc-
Confidence                 1      569999999999999988775   6999999999887664211000        0000 00111111 


Q ss_pred             CCCCCCCCccceeHHHHHHHHHHhhccc
Q 039049          213 RGEYPNTTVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       213 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~  240 (305)
                         .+  ...+..++|+|+++.+++...
T Consensus       216 ---~p--~~r~~~p~dva~~~~fL~s~~  238 (259)
T PRK08340        216 ---TP--LKRTGRWEELGSLIAFLLSEN  238 (259)
T ss_pred             ---CC--ccCCCCHHHHHHHHHHHcCcc
Confidence               11  234678999999999999854

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.81  E-value=3e-18  Score=141.98  Aligned_cols=199  Identities=19%  Similarity=0.169  Sum_probs=138.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchh-hhhhccCccCceEEEEccCC--CcchHHHHh-------
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVG-FLWELNGAEERLKIMKADLL--MEGSFDEAI-------   71 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~--d~~~~~~~~-------   71 (305)
                      ++|+||||+|+||.+++++|++.|++|++++|+........ .+...  ...++.++.+|+.  +.+++.+++       
T Consensus        13 k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   90 (247)
T PRK08945         13 RIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAA--GGPQPAIIPLDLLTATPQNYQQLADTIEEQF   90 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhc--CCCCceEEEecccCCCHHHHHHHHHHHHHHh
Confidence            68999999999999999999999999999999865432221 11111  1235677788885  444444333       


Q ss_pred             cCCCEEEEeccccccC-----CCCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccC
Q 039049           72 QGVDGVFHTASPVLVP-----YDNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLN  142 (305)
Q Consensus        72 ~~~d~Vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  142 (305)
                      .++|+|||+|+.....     ...+.+...+++|+.++.++++.+.    +. +.++||++||.....+....       
T Consensus        91 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~-~~~~iv~~ss~~~~~~~~~~-------  162 (247)
T PRK08945         91 GRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKS-PAASLVFTSSSVGRQGRANW-------  162 (247)
T ss_pred             CCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC-CCCEEEEEccHhhcCCCCCC-------
Confidence            3689999999875431     1345567789999999888888764    34 66899999997643322110       


Q ss_pred             CCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCC
Q 039049          143 ESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNT  219 (305)
Q Consensus       143 E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (305)
                                    ..|+.+|.+.+.+++.+..+.   ++++++++|+.+-++.....           .....      
T Consensus       163 --------------~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~-----------~~~~~------  211 (247)
T PRK08945        163 --------------GAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASA-----------FPGED------  211 (247)
T ss_pred             --------------cccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhh-----------cCccc------
Confidence                          459999999999988887665   68889999998765521110           00000      


Q ss_pred             CccceeHHHHHHHHHHhhcccc
Q 039049          220 TVGFVHIDDVVGAHILAMEETR  241 (305)
Q Consensus       220 ~~~~i~v~D~a~~~~~~~~~~~  241 (305)
                      ...+...+|++..+.+++....
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~  233 (247)
T PRK08945        212 PQKLKTPEDIMPLYLYLMGDDS  233 (247)
T ss_pred             ccCCCCHHHHHHHHHHHhCccc
Confidence            1236788999999999886543

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.80  E-value=9.8e-18  Score=140.54  Aligned_cols=206  Identities=17%  Similarity=0.105  Sum_probs=135.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCC-cccchhhhhhcc-CccCceEEEEccCCCcchH----HHHh----
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPE-DLSKVGFLWELN-GAEERLKIMKADLLMEGSF----DEAI----   71 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~-~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~----~~~~----   71 (305)
                      +.++||||+|+||+++++.|+++|++|+++.|+.. .....  ..... ....++.++.+|+.|.+.+    .+++    
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~   79 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTL--AAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACF   79 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHH--HHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHH
Confidence            57999999999999999999999999999876532 22111  11111 1123566789999998754    3332    


Q ss_pred             ---cCCCEEEEeccccccCCC-----C----------chhhhhhhhhHHHHHHHHHHHHhcC---------CccEEEEec
Q 039049           72 ---QGVDGVFHTASPVLVPYD-----N----------NIQATLIDPCIKGTLNVLSSCKKAK---------SVKRVVLTS  124 (305)
Q Consensus        72 ---~~~d~Vi~~a~~~~~~~~-----~----------~~~~~~~~~n~~~~~~l~~~~~~~~---------~~~~~v~~S  124 (305)
                         .++|+||||||.......     .          ......+++|+.++..+.+++....         ...++|++|
T Consensus        80 ~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~  159 (267)
T TIGR02685        80 RAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLC  159 (267)
T ss_pred             HccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEeh
Confidence               268999999997543211     1          1245679999999999988764320         123577777


Q ss_pred             cceeeeccCCCCCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCch
Q 039049          125 SCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTST  201 (305)
Q Consensus       125 S~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~  201 (305)
                      |.....+.+               ..      ..|+.+|...+.+++.++.+   .|++++.++|+.+..+...+     
T Consensus       160 s~~~~~~~~---------------~~------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~-----  213 (267)
T TIGR02685       160 DAMTDQPLL---------------GF------TMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMP-----  213 (267)
T ss_pred             hhhccCCCc---------------cc------chhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccc-----
Confidence            654321111               01      56999999999999988766   58999999999987653211     


Q ss_pred             HHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhccc
Q 039049          202 LLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  240 (305)
                      ...........+  +   ...+...+|++.++++++...
T Consensus       214 ~~~~~~~~~~~~--~---~~~~~~~~~va~~~~~l~~~~  247 (267)
T TIGR02685       214 FEVQEDYRRKVP--L---GQREASAEQIADVVIFLVSPK  247 (267)
T ss_pred             hhHHHHHHHhCC--C---CcCCCCHHHHHHHHHHHhCcc
Confidence            111111111111  1   123568999999999998764

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.80  E-value=9.9e-18  Score=141.08  Aligned_cols=217  Identities=22%  Similarity=0.211  Sum_probs=161.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      |+||||||||++|++++++|+++|++|.+++|+++......         ..+++..+|+.++..+...++++|.++++.
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~---------~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~   71 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA---------GGVEVVLGDLRDPKSLVAGAKGVDGVLLIS   71 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc---------CCcEEEEeccCCHhHHHHHhccccEEEEEe
Confidence            57999999999999999999999999999999987554432         378999999999999999999999999998


Q ss_pred             cccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHHH
Q 039049           82 SPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAY  161 (305)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~  161 (305)
                      +... ...     ...........+..+.+. . ++++++++|...+....                       ...|..
T Consensus        72 ~~~~-~~~-----~~~~~~~~~~~~~a~~a~-~-~~~~~~~~s~~~~~~~~-----------------------~~~~~~  120 (275)
T COG0702          72 GLLD-GSD-----AFRAVQVTAVVRAAEAAG-A-GVKHGVSLSVLGADAAS-----------------------PSALAR  120 (275)
T ss_pred             cccc-ccc-----chhHHHHHHHHHHHHHhc-C-CceEEEEeccCCCCCCC-----------------------ccHHHH
Confidence            8754 211     122333334444454444 3 57889998876532110                       066999


Q ss_pred             HHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCC-CCCCCCCccceeHHHHHHHHHHhhccc
Q 039049          162 AKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLR-GEYPNTTVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       162 sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~D~a~~~~~~~~~~  240 (305)
                      +|..+|..+.    ..+++++++|+..+|.......      .......+.+ ...+.+...++..+|++.++..++..+
T Consensus       121 ~~~~~e~~l~----~sg~~~t~lr~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~  190 (275)
T COG0702         121 AKAAVEAALR----SSGIPYTTLRRAAFYLGAGAAF------IEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAP  190 (275)
T ss_pred             HHHHHHHHHH----hcCCCeEEEecCeeeeccchhH------HHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCC
Confidence            9999999984    5689999999777776543211      1122222222 223444789999999999999999887


Q ss_pred             cc-CceEEEec-CCcCHHHHHHHHHHhCCC
Q 039049          241 RA-SGRLICSS-SVAHWSPIIEMLKATYPS  268 (305)
Q Consensus       241 ~~-~~~~~~~~-~~~s~~el~~~i~~~~~~  268 (305)
                      .. +..|.+++ +..+..++++.+.+..++
T Consensus       191 ~~~~~~~~l~g~~~~~~~~~~~~l~~~~gr  220 (275)
T COG0702         191 ATAGRTYELAGPEALTLAELASGLDYTIGR  220 (275)
T ss_pred             cccCcEEEccCCceecHHHHHHHHHHHhCC
Confidence            64 45688875 589999999999999975

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.80  E-value=1.1e-17  Score=138.83  Aligned_cols=206  Identities=17%  Similarity=0.106  Sum_probs=144.3

Q ss_pred             CcEEEeCCc--chHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            2 PEYCVTGGT--GFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~~--G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      |+++||||+  +.||+++++.|++.|++|++..|+.....   .+....  ..++.++++|+.|++++.++++       
T Consensus         8 k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~---~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   82 (252)
T PRK06079          8 KKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKK---SLQKLV--DEEDLLVECDVASDESIERAFATIKERVG   82 (252)
T ss_pred             CEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHH---HHHhhc--cCceeEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            679999999  79999999999999999999988732111   111111  2357889999999988877654       


Q ss_pred             CCCEEEEecccccc--------CCCCchhhhhhhhhHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCCCcccCC
Q 039049           73 GVDGVFHTASPVLV--------PYDNNIQATLIDPCIKGTLNVLSSCKKA-KSVKRVVLTSSCSSIRYRHDAQQVSPLNE  143 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~E  143 (305)
                      ++|++|||||....        ....+.+...+++|+.++..+.+.+... ....++|++||.......+.         
T Consensus        83 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~~~---------  153 (252)
T PRK06079         83 KIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAIPN---------  153 (252)
T ss_pred             CCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccCCc---------
Confidence            57999999997542        1134567778999999999998887543 12258999998653221111         


Q ss_pred             CCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCC
Q 039049          144 SHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTT  220 (305)
Q Consensus       144 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (305)
                                  ...|+.+|...+.+.+.++.+   .|+++..+.||.+-.+...... .............+      .
T Consensus       154 ------------~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~-~~~~~~~~~~~~~p------~  214 (252)
T PRK06079        154 ------------YNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIK-GHKDLLKESDSRTV------D  214 (252)
T ss_pred             ------------chhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCC-ChHHHHHHHHhcCc------c
Confidence                        156999999999999988876   4799999999999776422111 11111122211111      2


Q ss_pred             ccceeHHHHHHHHHHhhccc
Q 039049          221 VGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       221 ~~~i~v~D~a~~~~~~~~~~  240 (305)
                      ..+..++|+++++.+++...
T Consensus       215 ~r~~~pedva~~~~~l~s~~  234 (252)
T PRK06079        215 GVGVTIEEVGNTAAFLLSDL  234 (252)
T ss_pred             cCCCCHHHHHHHHHHHhCcc
Confidence            34688899999999999754

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.80  E-value=2e-17  Score=137.71  Aligned_cols=205  Identities=17%  Similarity=0.041  Sum_probs=140.2

Q ss_pred             CcEEEeCCcc--hHHHHHHHHHHHcCCeEEEEEeCCCc--------ccchhh-hhhccCccCceEEEEccCCCcchHHHH
Q 039049            2 PEYCVTGGTG--FIAAHLVKALLDKGHMVRTTVRDPED--------LSKVGF-LWELNGAEERLKIMKADLLMEGSFDEA   70 (305)
Q Consensus         2 ~~ilItG~~G--~iG~~l~~~l~~~g~~V~~~~r~~~~--------~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~   70 (305)
                      ++++||||+|  .||++++++|+++|++|++..|....        ...... .........++.++++|+.|.+++.++
T Consensus         7 k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~~~   86 (256)
T PRK12859          7 KVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPKEL   86 (256)
T ss_pred             cEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence            6899999995  79999999999999999987643210        111111 111222234688899999999988877


Q ss_pred             hc-------CCCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCC
Q 039049           71 IQ-------GVDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDA  135 (305)
Q Consensus        71 ~~-------~~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~  135 (305)
                      ++       .+|+|||+|+......    ..+.+...+++|+.+...+.+.+    ++. +..+||++||.....+.+. 
T Consensus        87 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~-  164 (256)
T PRK12859         87 LNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKK-SGGRIINMTSGQFQGPMVG-  164 (256)
T ss_pred             HHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCeEEEEEcccccCCCCCC-
Confidence            64       4799999999754321    34456678999999998886554    323 3469999999764322111 


Q ss_pred             CCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcC
Q 039049          136 QQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGL  212 (305)
Q Consensus       136 ~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~  212 (305)
                                    .      ..|+.+|.+.+.+.+.++.+   .+++++.++|+.+-.+...    .  .....+....
T Consensus       165 --------------~------~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~----~--~~~~~~~~~~  218 (256)
T PRK12859        165 --------------E------LAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMT----E--EIKQGLLPMF  218 (256)
T ss_pred             --------------c------hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCC----H--HHHHHHHhcC
Confidence                          1      56999999999998888765   4899999999988665321    1  1111111111


Q ss_pred             CCCCCCCCccceeHHHHHHHHHHhhccc
Q 039049          213 RGEYPNTTVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       213 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~  240 (305)
                      +      ...+...+|+++++.+++...
T Consensus       219 ~------~~~~~~~~d~a~~~~~l~s~~  240 (256)
T PRK12859        219 P------FGRIGEPKDAARLIKFLASEE  240 (256)
T ss_pred             C------CCCCcCHHHHHHHHHHHhCcc
Confidence            1      233567899999999988653

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.80  E-value=4.5e-18  Score=160.19  Aligned_cols=197  Identities=17%  Similarity=0.172  Sum_probs=146.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+++...+...  .......++.++++|+.|.+++.++++       ++
T Consensus       372 k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i  449 (657)
T PRK07201        372 KVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVA--EIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHV  449 (657)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--HHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            679999999999999999999999999999998654332211  111123468899999999998887765       58


Q ss_pred             CEEEEeccccccCC---C---CchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCC
Q 039049           75 DGVFHTASPVLVPY---D---NNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNES  144 (305)
Q Consensus        75 d~Vi~~a~~~~~~~---~---~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~  144 (305)
                      |++|||||......   .   .+.+...+++|+.++.++.+.+    ++. +.++||++||..++.+.+..         
T Consensus       450 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~---------  519 (657)
T PRK07201        450 DYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRER-RFGHVVNVSSIGVQTNAPRF---------  519 (657)
T ss_pred             CEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-CCCEEEEECChhhcCCCCCc---------
Confidence            99999999753221   1   2356678999999998887765    334 56799999998765542211         


Q ss_pred             CCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCc
Q 039049          145 HWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTV  221 (305)
Q Consensus       145 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (305)
                                  ..|+.+|.+.+.+.+.++.+   .++++++++|+.+..+...+...                +  ...
T Consensus       520 ------------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~----------------~--~~~  569 (657)
T PRK07201        520 ------------SAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKR----------------Y--NNV  569 (657)
T ss_pred             ------------chHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcccc----------------c--cCC
Confidence                        56999999999999887765   38999999999998775322100                0  012


Q ss_pred             cceeHHHHHHHHHHhhccc
Q 039049          222 GFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~  240 (305)
                      ..+..+++|+.++..+...
T Consensus       570 ~~~~~~~~a~~i~~~~~~~  588 (657)
T PRK07201        570 PTISPEEAADMVVRAIVEK  588 (657)
T ss_pred             CCCCHHHHHHHHHHHHHhC
Confidence            3578999999999987653

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.79  E-value=4.8e-18  Score=139.99  Aligned_cols=203  Identities=18%  Similarity=0.167  Sum_probs=141.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++|+||||+|+||+++++.|++.|++|++++|+++......  .... ...++.++++|+.+.+.+.++++       ++
T Consensus         6 ~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~--~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   82 (238)
T PRK05786          6 KKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMK--KTLS-KYGNIHYVVGDVSSTESARNVIEKAAKVLNAI   82 (238)
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--HHHH-hcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            58999999999999999999999999999999865332211  1111 12367889999999888877654       46


Q ss_pred             CEEEEeccccccCC--CCchhhhhhhhhHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCCCcccCCCCCCCccc
Q 039049           75 DGVFHTASPVLVPY--DNNIQATLIDPCIKGTLNVLSSCKKA-KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDY  151 (305)
Q Consensus        75 d~Vi~~a~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~  151 (305)
                      |.+||+++......  ..+.....++.|+.+...+++.+... ....+||++||.......        .      .+. 
T Consensus        83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~--------~------~~~-  147 (238)
T PRK05786         83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKA--------S------PDQ-  147 (238)
T ss_pred             CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccC--------C------CCc-
Confidence            99999998654221  22344566889999988888876543 122579999986542210        0      011 


Q ss_pred             ccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHH
Q 039049          152 CKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDD  228 (305)
Q Consensus       152 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  228 (305)
                           ..|+.+|.+.+.+++.+..+.   +++++++||+.++++.....      .+.. .       ......++..+|
T Consensus       148 -----~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~------~~~~-~-------~~~~~~~~~~~~  208 (238)
T PRK05786        148 -----LSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPER------NWKK-L-------RKLGDDMAPPED  208 (238)
T ss_pred             -----hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchh------hhhh-h-------ccccCCCCCHHH
Confidence                 559999999998888877654   89999999999998742110      0000 0       000123578899


Q ss_pred             HHHHHHHhhcccc
Q 039049          229 VVGAHILAMEETR  241 (305)
Q Consensus       229 ~a~~~~~~~~~~~  241 (305)
                      +++++.+++..+.
T Consensus       209 va~~~~~~~~~~~  221 (238)
T PRK05786        209 FAKVIIWLLTDEA  221 (238)
T ss_pred             HHHHHHHHhcccc
Confidence            9999999997533

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.79  E-value=1.3e-17  Score=138.91  Aligned_cols=211  Identities=13%  Similarity=0.033  Sum_probs=143.2

Q ss_pred             CcEEEeCCc--chHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            2 PEYCVTGGT--GFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~~--G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      |+++||||+  +.||+++++.|++.|++|++..|+.+.......+.........+.++++|+.|++++.++++       
T Consensus         7 k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g   86 (258)
T PRK07370          7 KKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQKWG   86 (258)
T ss_pred             cEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHHcC
Confidence            579999986  79999999999999999988877543211111122221112346788999999998887664       


Q ss_pred             CCCEEEEecccccc-----C---CCCchhhhhhhhhHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCCCcccCC
Q 039049           73 GVDGVFHTASPVLV-----P---YDNNIQATLIDPCIKGTLNVLSSCKKA-KSVKRVVLTSSCSSIRYRHDAQQVSPLNE  143 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~-----~---~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~E  143 (305)
                      ++|++|||||....     .   ...+.+...+++|+.++..+.+++... ..-.++|++||.....+.+.         
T Consensus        87 ~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~---------  157 (258)
T PRK07370         87 KLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAIPN---------  157 (258)
T ss_pred             CCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccCCcc---------
Confidence            57999999997531     1   134567789999999999998886542 12258999999653221111         


Q ss_pred             CCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCC
Q 039049          144 SHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTT  220 (305)
Q Consensus       144 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (305)
                                  ...|+.+|.+.+.+.+.++.++   |++++.+.||.+-.+..... ..............+      .
T Consensus       158 ------------~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~-~~~~~~~~~~~~~~p------~  218 (258)
T PRK07370        158 ------------YNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAV-GGILDMIHHVEEKAP------L  218 (258)
T ss_pred             ------------cchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhcc-ccchhhhhhhhhcCC------c
Confidence                        0559999999999999988764   79999999999976632111 000111111111111      2


Q ss_pred             ccceeHHHHHHHHHHhhccc
Q 039049          221 VGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       221 ~~~i~v~D~a~~~~~~~~~~  240 (305)
                      ..+...+|++.++.+++...
T Consensus       219 ~r~~~~~dva~~~~fl~s~~  238 (258)
T PRK07370        219 RRTVTQTEVGNTAAFLLSDL  238 (258)
T ss_pred             CcCCCHHHHHHHHHHHhChh
Confidence            34677899999999999754

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.79  E-value=1.9e-17  Score=138.85  Aligned_cols=218  Identities=16%  Similarity=0.046  Sum_probs=146.5

Q ss_pred             CcEEEeCCcc--hHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            2 PEYCVTGGTG--FIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~~G--~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      |.++||||++  .||+++++.|++.|++|++..|+.........+...   .....++++|+.|.+++.++++       
T Consensus         8 k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~---~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g   84 (271)
T PRK06505          8 KRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAES---LGSDFVLPCDVEDIASVDAVFEALEKKWG   84 (271)
T ss_pred             CEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHh---cCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            5799999997  999999999999999999998864322222222111   1123568899999988877664       


Q ss_pred             CCCEEEEecccccc--------CCCCchhhhhhhhhHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCCCcccCC
Q 039049           73 GVDGVFHTASPVLV--------PYDNNIQATLIDPCIKGTLNVLSSCKKA-KSVKRVVLTSSCSSIRYRHDAQQVSPLNE  143 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~E  143 (305)
                      .+|++|||||....        ....+.+...+++|+.++.++++++... ..-.++|++||.......+.         
T Consensus        85 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~~~---------  155 (271)
T PRK06505         85 KLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVMPN---------  155 (271)
T ss_pred             CCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccCCc---------
Confidence            57999999997532        1134567778999999999988876542 11258999999754222111         


Q ss_pred             CCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCC
Q 039049          144 SHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTT  220 (305)
Q Consensus       144 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (305)
                                  ...|+.+|.+.+.+.+.++.++   |+++..+.||.+-.+..... ..............+      .
T Consensus       156 ------------~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~-~~~~~~~~~~~~~~p------~  216 (271)
T PRK06505        156 ------------YNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGI-GDARAIFSYQQRNSP------L  216 (271)
T ss_pred             ------------cchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccC-cchHHHHHHHhhcCC------c
Confidence                        0569999999999999888764   79999999999977642211 111111111111111      2


Q ss_pred             ccceeHHHHHHHHHHhhccccc--Cc-eEEEec
Q 039049          221 VGFVHIDDVVGAHILAMEETRA--SG-RLICSS  250 (305)
Q Consensus       221 ~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  250 (305)
                      ..+..++|+|+++++++.....  .+ .+.+.+
T Consensus       217 ~r~~~peeva~~~~fL~s~~~~~itG~~i~vdg  249 (271)
T PRK06505        217 RRTVTIDEVGGSALYLLSDLSSGVTGEIHFVDS  249 (271)
T ss_pred             cccCCHHHHHHHHHHHhCccccccCceEEeecC
Confidence            2356789999999999875332  33 355544

>PRK05855 short chain dehydrogenase; Validated

Probab=99.79  E-value=7e-18  Score=156.76  Aligned_cols=216  Identities=15%  Similarity=0.074  Sum_probs=147.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|+||+++++.|+++|++|++++|+.++..+....  ....+.++.++++|+.|++++.++++       .+
T Consensus       316 ~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~--~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i  393 (582)
T PRK05855        316 KLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAEL--IRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP  393 (582)
T ss_pred             CEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH--HHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            6799999999999999999999999999999986543332211  11123468899999999998887765       47


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKK----AKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |++|||||......    ..+.....+++|+.++.++.+++..    .+...+||++||...+.+.+..           
T Consensus       394 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~-----------  462 (582)
T PRK05855        394 DIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSL-----------  462 (582)
T ss_pred             cEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCC-----------
Confidence            99999999865432    3456677889999999998887532    2113589999998876543221           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCch-HHHHHHHHhcCCCCCCCCCcc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTST-LLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  222 (305)
                                ..|+.||.+.+.+.+.++.+   .|+++++++||.+-.+......... ................  ...
T Consensus       463 ----------~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  530 (582)
T PRK05855        463 ----------PAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLY--QRR  530 (582)
T ss_pred             ----------cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhc--ccc
Confidence                      66999999999988877655   4899999999998765422110000 0000000000000000  111


Q ss_pred             ceeHHHHHHHHHHhhccccc
Q 039049          223 FVHIDDVVGAHILAMEETRA  242 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~~  242 (305)
                      .+..+|+|++++.++.++..
T Consensus       531 ~~~p~~va~~~~~~~~~~~~  550 (582)
T PRK05855        531 GYGPEKVAKAIVDAVKRNKA  550 (582)
T ss_pred             CCCHHHHHHHHHHHHHcCCC
Confidence            24689999999999987543

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.79  E-value=1.3e-17  Score=142.28  Aligned_cols=230  Identities=15%  Similarity=0.095  Sum_probs=151.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc------CCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ------GVD   75 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------~~d   75 (305)
                      ++++||||+|+||+++++.|+++|++|++..|+...... .....+.....++.++++|+.|.+.+.++++      ++|
T Consensus        13 k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~-~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~iD   91 (306)
T PRK07792         13 KVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDAS-DVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGLD   91 (306)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHH-HHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCC
Confidence            689999999999999999999999999998875432111 1111111223468899999999888877664      589


Q ss_pred             EEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc-----C-----CccEEEEeccceeeeccCCCCCCccc
Q 039049           76 GVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA-----K-----SVKRVVLTSSCSSIRYRHDAQQVSPL  141 (305)
Q Consensus        76 ~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~-----~-----~~~~~v~~SS~~~~~~~~~~~~~~~~  141 (305)
                      +||||||......    ..+.+...+++|+.++.++++++...     .     ...++|++||...+.+....      
T Consensus        92 ~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------  165 (306)
T PRK07792         92 IVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQ------  165 (306)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCCC------
Confidence            9999999865431    34456778999999999999876421     0     12489999997654332111      


Q ss_pred             CCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCC
Q 039049          142 NESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPN  218 (305)
Q Consensus       142 ~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (305)
                                     ..|+.+|.+.+.+.+.++.+   +++++..+.|+. -.+. ..   .   .+    ..... ...
T Consensus       166 ---------------~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~-~~---~---~~----~~~~~-~~~  217 (306)
T PRK07792        166 ---------------ANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAM-TA---D---VF----GDAPD-VEA  217 (306)
T ss_pred             ---------------chHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCch-hh---h---hc----cccch-hhh
Confidence                           45999999999998887765   589999999972 1110 00   0   00    00000 000


Q ss_pred             CCccceeHHHHHHHHHHhhcccc---cCceEEEec-------------------CCcCHHHHHHHHHHhC
Q 039049          219 TTVGFVHIDDVVGAHILAMEETR---ASGRLICSS-------------------SVAHWSPIIEMLKATY  266 (305)
Q Consensus       219 ~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~-------------------~~~s~~el~~~i~~~~  266 (305)
                      .....+.++|++.++.+++....   .+..|.+.+                   ...+..|+.+.+.+.+
T Consensus       218 ~~~~~~~pe~va~~v~~L~s~~~~~~tG~~~~v~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (306)
T PRK07792        218 GGIDPLSPEHVVPLVQFLASPAAAEVNGQVFIVYGPMVTLVAAPVVERRFDADGDAWDPGELSATLRDYF  287 (306)
T ss_pred             hccCCCCHHHHHHHHHHHcCccccCCCCCEEEEcCCeEEEEeeeeecceecCCCCCCCHHHHHHHHHHHh
Confidence            12334689999999998886432   233333321                   2356777777777763

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.79  E-value=4.6e-18  Score=138.88  Aligned_cols=168  Identities=16%  Similarity=0.135  Sum_probs=125.2

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-----CCC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-----GVD   75 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----~~d   75 (305)
                      |++++||||+|+||+++++.|++.|++|++++|++.+.....   .    ..++.+..+|+.|.+++.++++     ++|
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~---~----~~~~~~~~~D~~d~~~~~~~~~~~~~~~id   73 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ---A----LPGVHIEKLDMNDPASLDQLLQRLQGQRFD   73 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH---h----ccccceEEcCCCCHHHHHHHHHHhhcCCCC
Confidence            789999999999999999999999999999999876533221   1    1257788899999888877665     589


Q ss_pred             EEEEeccccccC------CCCchhhhhhhhhHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           76 GVFHTASPVLVP------YDNNIQATLIDPCIKGTLNVLSSCKKA--KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        76 ~Vi~~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      +|||+||.....      ...+.....+++|+.++..+.+++...  .+..+++++||..  +..+.    .+      .
T Consensus        74 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~--g~~~~----~~------~  141 (225)
T PRK08177         74 LLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQL--GSVEL----PD------G  141 (225)
T ss_pred             EEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCc--ccccc----CC------C
Confidence            999999986431      123456678899999999999887543  1335788888753  21110    00      0


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCC
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPL  193 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~  193 (305)
                      ...      ..|+.+|.+.+.+++.++.++   ++++..++||.+-.+.
T Consensus       142 ~~~------~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~  184 (225)
T PRK08177        142 GEM------PLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDM  184 (225)
T ss_pred             CCc------cchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCC
Confidence            011      459999999999999887664   6899999999987664

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.79  E-value=3.1e-17  Score=136.59  Aligned_cols=211  Identities=13%  Similarity=0.049  Sum_probs=142.5

Q ss_pred             CcEEEeCCc--chHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            2 PEYCVTGGT--GFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~~--G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      |+++||||+  +.||+++++.|++.|++|++..|+.........+.... ...++.++++|+.|++++.++++       
T Consensus         8 k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   86 (257)
T PRK08594          8 KTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTL-EGQESLLLPCDVTSDEEITACFETIKEEVG   86 (257)
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHc-CCCceEEEecCCCCHHHHHHHHHHHHHhCC
Confidence            579999997  89999999999999999999987643322222222111 12467889999999988877664       


Q ss_pred             CCCEEEEecccccc--------CCCCchhhhhhhhhHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCCCcccCC
Q 039049           73 GVDGVFHTASPVLV--------PYDNNIQATLIDPCIKGTLNVLSSCKKA-KSVKRVVLTSSCSSIRYRHDAQQVSPLNE  143 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~E  143 (305)
                      ++|++|||||....        ..+.+.+...+++|+.++..+.+.+... ....++|++||.....+.+.         
T Consensus        87 ~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~---------  157 (257)
T PRK08594         87 VIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQN---------  157 (257)
T ss_pred             CccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCCCC---------
Confidence            47999999997531        1123445667889999988888776543 12258999999754221111         


Q ss_pred             CCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCC
Q 039049          144 SHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTT  220 (305)
Q Consensus       144 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (305)
                                  ...|+.||.+.+.+.+.++.++   |+++..+.|+.+-.+........ ...........    +  .
T Consensus       158 ------------~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~----p--~  218 (257)
T PRK08594        158 ------------YNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGF-NSILKEIEERA----P--L  218 (257)
T ss_pred             ------------CchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccc-cHHHHHHhhcC----C--c
Confidence                        0459999999999999887654   79999999999876532110000 00111111111    1  2


Q ss_pred             ccceeHHHHHHHHHHhhcccc
Q 039049          221 VGFVHIDDVVGAHILAMEETR  241 (305)
Q Consensus       221 ~~~i~v~D~a~~~~~~~~~~~  241 (305)
                      ..+..++|++.++++++....
T Consensus       219 ~r~~~p~~va~~~~~l~s~~~  239 (257)
T PRK08594        219 RRTTTQEEVGDTAAFLFSDLS  239 (257)
T ss_pred             cccCCHHHHHHHHHHHcCccc
Confidence            346789999999999987543

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.5e-17  Score=140.60  Aligned_cols=217  Identities=15%  Similarity=0.089  Sum_probs=145.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCC------cccchhh-hhhccCccCceEEEEccCCCcchHHHHhc--
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPE------DLSKVGF-LWELNGAEERLKIMKADLLMEGSFDEAIQ--   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~------~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--   72 (305)
                      ++++||||++.||+++++.|++.|++|+++.|+..      ....... ...+.....++.++.+|+.|.+++.++++  
T Consensus         7 k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~   86 (286)
T PRK07791          7 RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVDAA   86 (286)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHH
Confidence            67999999999999999999999999999887641      0011111 11111223467888999999888777653  


Q ss_pred             -----CCCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc----C--C---ccEEEEeccceeeeccCC
Q 039049           73 -----GVDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA----K--S---VKRVVLTSSCSSIRYRHD  134 (305)
Q Consensus        73 -----~~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~--~---~~~~v~~SS~~~~~~~~~  134 (305)
                           .+|++|||||......    ..+.+...+++|+.++..+.+++...    .  +   -.+||++||.....+.+.
T Consensus        87 ~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~  166 (286)
T PRK07791         87 VETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVG  166 (286)
T ss_pred             HHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcCCCC
Confidence                 5799999999765321    34567788999999999998776421    0  1   248999999765433221


Q ss_pred             CCCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhc
Q 039049          135 AQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKG  211 (305)
Q Consensus       135 ~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~  211 (305)
                      .                     ..|+.+|.+.+.+.+.++.+   .++++..+.|+ +..+..    ..   ........
T Consensus       167 ~---------------------~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~----~~---~~~~~~~~  217 (286)
T PRK07791        167 Q---------------------GNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMT----ET---VFAEMMAK  217 (286)
T ss_pred             c---------------------hhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcc----hh---hHHHHHhc
Confidence            1                     56999999999998888766   48999999997 422211    00   11111111


Q ss_pred             CCCCCCCCCccceeHHHHHHHHHHhhcccc--cCc-eEEEecC
Q 039049          212 LRGEYPNTTVGFVHIDDVVGAHILAMEETR--ASG-RLICSSS  251 (305)
Q Consensus       212 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~  251 (305)
                      .    +.+...+..++|++.++++++....  ..+ .+.+.|.
T Consensus       218 ~----~~~~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG  256 (286)
T PRK07791        218 P----EEGEFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGG  256 (286)
T ss_pred             C----cccccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCC
Confidence            1    1112235689999999999987532  233 3555544

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.9e-17  Score=139.21  Aligned_cols=237  Identities=18%  Similarity=0.132  Sum_probs=146.6

Q ss_pred             CCc-EEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc------C
Q 039049            1 MPE-YCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ------G   73 (305)
Q Consensus         1 m~~-ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------~   73 (305)
                      |++ ++|||| |+||+++++.|+ .|++|++++|+..+.....  ........++.++++|+.|.+++.++++      .
T Consensus         1 ~~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~--~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~   76 (275)
T PRK06940          1 MKEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAA--KTLREAGFDVSTQEVDVSSRESVKALAATAQTLGP   76 (275)
T ss_pred             CCCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHH--HHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCC
Confidence            544 677776 799999999996 8999999999765332211  1112223367889999999988887764      5


Q ss_pred             CCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCC-CCCcccCCCCCCC---
Q 039049           74 VDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAK-SVKRVVLTSSCSSIRYRHDA-QQVSPLNESHWSD---  148 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~-~~~~~~~E~~~~~---  148 (305)
                      +|++|||||...   ....+...+++|+.++.++++.+...- .-.++|++||.......... .........+...   
T Consensus        77 id~li~nAG~~~---~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (275)
T PRK06940         77 VTGLVHTAGVSP---SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLS  153 (275)
T ss_pred             CCEEEECCCcCC---chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhccccccccccccc
Confidence            899999999754   345677899999999999999876531 11356777776543221000 0000000000000   


Q ss_pred             -----cccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCC-chHHHHHHHHhcCCCCCCCC
Q 039049          149 -----PDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPT-STLLLILAMVKGLRGEYPNT  219 (305)
Q Consensus       149 -----~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  219 (305)
                           +.........|+.||.+.+.+.+.++.++   +++++.+.||.+..+....... ........+....+      
T Consensus       154 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p------  227 (275)
T PRK06940        154 LPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSP------  227 (275)
T ss_pred             cccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCC------
Confidence                 00000011569999999999988877654   7999999999998774321110 00011111111111      


Q ss_pred             CccceeHHHHHHHHHHhhccccc---CceEEEec
Q 039049          220 TVGFVHIDDVVGAHILAMEETRA---SGRLICSS  250 (305)
Q Consensus       220 ~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~  250 (305)
                      ...+...+|+|.++.+++.....   +..+.+.+
T Consensus       228 ~~r~~~peeia~~~~fL~s~~~~~itG~~i~vdg  261 (275)
T PRK06940        228 AGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDG  261 (275)
T ss_pred             cccCCCHHHHHHHHHHHcCcccCcccCceEEEcC
Confidence            23478899999999999864332   33455543

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.79  E-value=4e-17  Score=136.24  Aligned_cols=209  Identities=13%  Similarity=0.078  Sum_probs=143.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhh-hhhccCccCceEEEEccCCCcchHHHHhc---CCCEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGF-LWELNGAEERLKIMKADLLMEGSFDEAIQ---GVDGV   77 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~V   77 (305)
                      ++++||||+|.||+++++.|++.|++|++++|++.+...... +..  ....++.++.+|+.|.+++.++++   .+|++
T Consensus         8 k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~l   85 (259)
T PRK06125          8 KRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRA--AHGVDVAVHALDLSSPEAREQLAAEAGDIDIL   85 (259)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh--hcCCceEEEEecCCCHHHHHHHHHHhCCCCEE
Confidence            689999999999999999999999999999998654332211 111  112367889999999988887765   58999


Q ss_pred             EEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCc
Q 039049           78 FHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDP  149 (305)
Q Consensus        78 i~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~  149 (305)
                      |||||......    ..+.+...+++|+.+...+++.+.    +. +..++|++||.....+..                
T Consensus        86 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~iss~~~~~~~~----------------  148 (259)
T PRK06125         86 VNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKAR-GSGVIVNVIGAAGENPDA----------------  148 (259)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEecCccccCCCC----------------
Confidence            99999754321    344567788999999998888763    33 345899999864321110                


Q ss_pred             ccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCC-------CchHHHHHHHHhcCCCCCCCC
Q 039049          150 DYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQP-------TSTLLLILAMVKGLRGEYPNT  219 (305)
Q Consensus       150 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~  219 (305)
                      .     ...|..+|...+.+.+.++.+   .+++++.+.||.+..+......       .............    .+  
T Consensus       149 ~-----~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--  217 (259)
T PRK06125        149 D-----YICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAG----LP--  217 (259)
T ss_pred             C-----chHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhcc----CC--
Confidence            0     045899999999998887654   4899999999998766311000       0000001111111    11  


Q ss_pred             CccceeHHHHHHHHHHhhccc
Q 039049          220 TVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       220 ~~~~i~v~D~a~~~~~~~~~~  240 (305)
                      ...+..++|+|+++++++...
T Consensus       218 ~~~~~~~~~va~~~~~l~~~~  238 (259)
T PRK06125        218 LGRPATPEEVADLVAFLASPR  238 (259)
T ss_pred             cCCCcCHHHHHHHHHHHcCch
Confidence            234678999999999998753

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.78  E-value=5.9e-18  Score=141.47  Aligned_cols=207  Identities=17%  Similarity=0.145  Sum_probs=143.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|+||+++++.|++.|++|+++.|+.+...+   +...  ...++.++++|+.|.+++.++++       ++
T Consensus         6 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~---l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (262)
T TIGR03325         6 EVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQE---LEAA--HGDAVVGVEGDVRSLDDHKEAVARCVAAFGKI   80 (262)
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH---HHhh--cCCceEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999997653322   1111  12367889999999887776654       57


Q ss_pred             CEEEEeccccccC----C-CC----chhhhhhhhhHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCCCcccCC
Q 039049           75 DGVFHTASPVLVP----Y-DN----NIQATLIDPCIKGTLNVLSSCKKA--KSVKRVVLTSSCSSIRYRHDAQQVSPLNE  143 (305)
Q Consensus        75 d~Vi~~a~~~~~~----~-~~----~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~E  143 (305)
                      |++|||||.....    . ..    +.+...+++|+.++..+++++...  ....++|++||...+.+....        
T Consensus        81 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~--------  152 (262)
T TIGR03325        81 DCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNGGG--------  152 (262)
T ss_pred             CEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCCCC--------
Confidence            9999999964311    0 11    245678999999999999998653  122478888887654332111        


Q ss_pred             CCCCCcccccccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEecCceecCCCCCCCCc-hHH-----HHHHHHhcCCCC
Q 039049          144 SHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC--GIDMVVVNPSFVVGPLLAPQPTS-TLL-----LILAMVKGLRGE  215 (305)
Q Consensus       144 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~i~Rp~~v~G~~~~~~~~~-~~~-----~~~~~~~~~~~~  215 (305)
                                   ..|+.+|...+.+.+.++.++  .+++..+.|+.+..+........ ...     .........   
T Consensus       153 -------------~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---  216 (262)
T TIGR03325       153 -------------PLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSV---  216 (262)
T ss_pred             -------------chhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhhc---
Confidence                         459999999999999998875  38899999999987643211000 000     001111111   


Q ss_pred             CCCCCccceeHHHHHHHHHHhhcc
Q 039049          216 YPNTTVGFVHIDDVVGAHILAMEE  239 (305)
Q Consensus       216 ~~~~~~~~i~v~D~a~~~~~~~~~  239 (305)
                      .+  ...+...+|++.++.+++..
T Consensus       217 ~p--~~r~~~p~eva~~~~~l~s~  238 (262)
T TIGR03325       217 LP--IGRMPDAEEYTGAYVFFATR  238 (262)
T ss_pred             CC--CCCCCChHHhhhheeeeecC
Confidence            11  23467889999999998875

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.78  E-value=4.7e-17  Score=135.64  Aligned_cols=208  Identities=14%  Similarity=0.057  Sum_probs=142.7

Q ss_pred             CcEEEeCCc--chHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            2 PEYCVTGGT--GFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~~--G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      |+++||||+  +.||++++++|++.|++|++..|+.........+...   ...+.++++|+.|.+++.++++       
T Consensus        11 k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   87 (258)
T PRK07533         11 KRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEE---LDAPIFLPLDVREPGQLEAVFARIAEEWG   87 (258)
T ss_pred             CEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHh---hccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence            679999998  4999999999999999999998875432222222111   1235678899999988877654       


Q ss_pred             CCCEEEEeccccccC--------CCCchhhhhhhhhHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCCCcccCC
Q 039049           73 GVDGVFHTASPVLVP--------YDNNIQATLIDPCIKGTLNVLSSCKKA-KSVKRVVLTSSCSSIRYRHDAQQVSPLNE  143 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~E  143 (305)
                      .+|++|||||.....        .+.+.+...+++|+.++..+.+.+... ..-.++|++||.......           
T Consensus        88 ~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~~-----------  156 (258)
T PRK07533         88 RLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVV-----------  156 (258)
T ss_pred             CCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccCC-----------
Confidence            579999999975421        134567789999999999999887543 122479999986432111           


Q ss_pred             CCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCC
Q 039049          144 SHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTT  220 (305)
Q Consensus       144 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (305)
                           +.     ...|+.+|.+.+.+.+.++.+   .++++..+.|+.+-.+........ ...........+      .
T Consensus       157 -----~~-----~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~p------~  219 (258)
T PRK07533        157 -----EN-----YNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDF-DALLEDAAERAP------L  219 (258)
T ss_pred             -----cc-----chhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCc-HHHHHHHHhcCC------c
Confidence                 01     056999999999998888765   479999999999876542211111 111112211111      2


Q ss_pred             ccceeHHHHHHHHHHhhccc
Q 039049          221 VGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       221 ~~~i~v~D~a~~~~~~~~~~  240 (305)
                      ..+..++|++.++++++...
T Consensus       220 ~r~~~p~dva~~~~~L~s~~  239 (258)
T PRK07533        220 RRLVDIDDVGAVAAFLASDA  239 (258)
T ss_pred             CCCCCHHHHHHHHHHHhChh
Confidence            33678899999999998753

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.78  E-value=2.9e-17  Score=137.83  Aligned_cols=208  Identities=13%  Similarity=0.097  Sum_probs=141.4

Q ss_pred             CcEEEeCCc--chHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            2 PEYCVTGGT--GFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~~--G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      |+++||||+  +.||+++++.|++.|++|++..|+.........+....  ... .++++|+.|.+++.++++       
T Consensus         6 k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~--~~~-~~~~~Dv~d~~~v~~~~~~i~~~~g   82 (274)
T PRK08415          6 KKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQEL--GSD-YVYELDVSKPEHFKSLAESLKKDLG   82 (274)
T ss_pred             cEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhc--CCc-eEEEecCCCHHHHHHHHHHHHHHcC
Confidence            689999997  79999999999999999999988743212222221111  112 578899999988877664       


Q ss_pred             CCCEEEEecccccc--------CCCCchhhhhhhhhHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCCCcccCC
Q 039049           73 GVDGVFHTASPVLV--------PYDNNIQATLIDPCIKGTLNVLSSCKKA-KSVKRVVLTSSCSSIRYRHDAQQVSPLNE  143 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~E  143 (305)
                      ++|++|||||....        ....+.+...+++|+.++..+.+.+... ..-.++|++||.....+.+.         
T Consensus        83 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~~---------  153 (274)
T PRK08415         83 KIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYVPH---------  153 (274)
T ss_pred             CCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCCCc---------
Confidence            57999999997532        1134567788999999999998887543 12258999998653221111         


Q ss_pred             CCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCC
Q 039049          144 SHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTT  220 (305)
Q Consensus       144 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (305)
                                  ...|+.||.+.+.+.+.++.+   +|+++..+.||.+..+..... .. .......... ..  +  .
T Consensus       154 ------------~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~-~~-~~~~~~~~~~-~~--p--l  214 (274)
T PRK08415        154 ------------YNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGI-GD-FRMILKWNEI-NA--P--L  214 (274)
T ss_pred             ------------chhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhcc-ch-hhHHhhhhhh-hC--c--h
Confidence                        056999999999999988866   479999999999876532110 00 0000010000 01  1  2


Q ss_pred             ccceeHHHHHHHHHHhhccc
Q 039049          221 VGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       221 ~~~i~v~D~a~~~~~~~~~~  240 (305)
                      ..+..++|++.++++++...
T Consensus       215 ~r~~~pedva~~v~fL~s~~  234 (274)
T PRK08415        215 KKNVSIEEVGNSGMYLLSDL  234 (274)
T ss_pred             hccCCHHHHHHHHHHHhhhh
Confidence            33578899999999999753

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.78  E-value=6.3e-17  Score=134.94  Aligned_cols=208  Identities=13%  Similarity=0.067  Sum_probs=140.1

Q ss_pred             CcEEEeCCcc--hHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            2 PEYCVTGGTG--FIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~~G--~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      |+++||||++  .||+++++.|++.|++|++..|+.........+   ....+.+.++++|+.|++++.++++       
T Consensus         7 k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~---~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   83 (262)
T PRK07984          7 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEF---AAQLGSDIVLPCDVAEDASIDAMFAELGKVWP   83 (262)
T ss_pred             CEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHH---HhccCCceEeecCCCCHHHHHHHHHHHHhhcC
Confidence            6799999985  899999999999999999888863211112222   1112345678899999998887764       


Q ss_pred             CCCEEEEeccccccC---------CCCchhhhhhhhhHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCCCcccC
Q 039049           73 GVDGVFHTASPVLVP---------YDNNIQATLIDPCIKGTLNVLSSCKKA-KSVKRVVLTSSCSSIRYRHDAQQVSPLN  142 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~  142 (305)
                      .+|++|||||.....         ...+.+...+++|+.+...+.+.+... ..-.++|++||.....+.+.        
T Consensus        84 ~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~~~--------  155 (262)
T PRK07984         84 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPN--------  155 (262)
T ss_pred             CCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCCCC--------
Confidence            479999999975421         123345667899999988888776432 12257999998653211111        


Q ss_pred             CCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCC
Q 039049          143 ESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNT  219 (305)
Q Consensus       143 E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (305)
                                   ...|+.||...+.+.+.++.+   .++++..+.||.+-.+.... ...............+      
T Consensus       156 -------------~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~-~~~~~~~~~~~~~~~p------  215 (262)
T PRK07984        156 -------------YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASG-IKDFRKMLAHCEAVTP------  215 (262)
T ss_pred             -------------cchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhc-CCchHHHHHHHHHcCC------
Confidence                         055999999999999988876   37999999999886642111 0111111111111111      


Q ss_pred             CccceeHHHHHHHHHHhhccc
Q 039049          220 TVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       220 ~~~~i~v~D~a~~~~~~~~~~  240 (305)
                      ...+..++|++.++++++...
T Consensus       216 ~~r~~~pedva~~~~~L~s~~  236 (262)
T PRK07984        216 IRRTVTIEDVGNSAAFLCSDL  236 (262)
T ss_pred             CcCCCCHHHHHHHHHHHcCcc
Confidence            234678899999999998753

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.78  E-value=2.7e-17  Score=137.29  Aligned_cols=208  Identities=13%  Similarity=0.049  Sum_probs=139.8

Q ss_pred             CcEEEeCC--cchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            2 PEYCVTGG--TGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~--~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      ++++||||  ++.||+++++.|++.|++|++..|+.........+..   .......+++|+.|++++.++++       
T Consensus         7 k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   83 (261)
T PRK08690          7 KKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAA---ELDSELVFRCDVASDDEINQVFADLGKHWD   83 (261)
T ss_pred             cEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHh---ccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence            57999997  6799999999999999999988775322222222211   11234578999999998887764       


Q ss_pred             CCCEEEEeccccccC---------CCCchhhhhhhhhHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCCCccc
Q 039049           73 GVDGVFHTASPVLVP---------YDNNIQATLIDPCIKGTLNVLSSCKKA--KSVKRVVLTSSCSSIRYRHDAQQVSPL  141 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~  141 (305)
                      ++|++|||||.....         ...+.+...+++|+.++..+.+.+...  .+..++|++||.....+.+..      
T Consensus        84 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~~~~------  157 (261)
T PRK08690         84 GLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNY------  157 (261)
T ss_pred             CCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCCCCc------
Confidence            589999999986431         012345566788999888887765431  122579999987643221111      


Q ss_pred             CCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCC
Q 039049          142 NESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPN  218 (305)
Q Consensus       142 ~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (305)
                                     ..|+.+|...+.+.+.++.+   +|+++..+.||.+-.+..... ..............+     
T Consensus       158 ---------------~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~-~~~~~~~~~~~~~~p-----  216 (261)
T PRK08690        158 ---------------NVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGI-ADFGKLLGHVAAHNP-----  216 (261)
T ss_pred             ---------------ccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcC-CchHHHHHHHhhcCC-----
Confidence                           55999999999998887654   489999999999976532111 111111111111111     


Q ss_pred             CCccceeHHHHHHHHHHhhccc
Q 039049          219 TTVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       219 ~~~~~i~v~D~a~~~~~~~~~~  240 (305)
                       ...+..++|+|+++.+++...
T Consensus       217 -~~r~~~peevA~~v~~l~s~~  237 (261)
T PRK08690        217 -LRRNVTIEEVGNTAAFLLSDL  237 (261)
T ss_pred             -CCCCCCHHHHHHHHHHHhCcc
Confidence             234778999999999999854

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.78  E-value=1.7e-17  Score=135.17  Aligned_cols=186  Identities=16%  Similarity=0.112  Sum_probs=136.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc----CCCEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ----GVDGV   77 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----~~d~V   77 (305)
                      |+++||||+|.||+++++.|+++|++|+++.|+.++.....   ..    .++.++++|+.|.+++.++++    .+|++
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~---~~----~~~~~~~~D~~~~~~v~~~~~~~~~~id~l   73 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAA---KE----LDVDAIVCDNTDPASLEEARGLFPHHLDTI   73 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---Hh----ccCcEEecCCCCHHHHHHHHHHHhhcCcEE
Confidence            47999999999999999999999999999999765332211   10    145788999999998888775    58999


Q ss_pred             EEecccccc---C------CCCchhhhhhhhhHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           78 FHTASPVLV---P------YDNNIQATLIDPCIKGTLNVLSSCKKA-KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        78 i~~a~~~~~---~------~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      ||||+....   .      ...+.+...+++|+.++.++++++... ..-.++|++||...    +.             
T Consensus        74 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~----~~-------------  136 (223)
T PRK05884         74 VNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP----PA-------------  136 (223)
T ss_pred             EECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC----CC-------------
Confidence            999985311   0      023467788999999999999987542 12258999998541    00             


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccce
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFV  224 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  224 (305)
                        .      ..|+.+|...+.+.+.++.+   .+++++.+.||.+..+..           ... ..         .+.-
T Consensus       137 --~------~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~-----------~~~-~~---------~p~~  187 (223)
T PRK05884        137 --G------SAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGY-----------DGL-SR---------TPPP  187 (223)
T ss_pred             --c------cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhh-----------hhc-cC---------CCCC
Confidence              0      55999999999999888776   479999999998864421           000 00         0112


Q ss_pred             eHHHHHHHHHHhhccc
Q 039049          225 HIDDVVGAHILAMEET  240 (305)
Q Consensus       225 ~v~D~a~~~~~~~~~~  240 (305)
                      .++|++.++.+++...
T Consensus       188 ~~~~ia~~~~~l~s~~  203 (223)
T PRK05884        188 VAAEIARLALFLTTPA  203 (223)
T ss_pred             CHHHHHHHHHHHcCch
Confidence            7899999999998753

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.78  E-value=4.9e-17  Score=135.67  Aligned_cols=208  Identities=13%  Similarity=-0.005  Sum_probs=141.0

Q ss_pred             CcEEEeCCcc--hHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            2 PEYCVTGGTG--FIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~~G--~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      |.++||||++  .||+++++.|++.|++|++..|+.........+....   ....++++|+.|++++.++++       
T Consensus         9 k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~---g~~~~~~~Dv~~~~~v~~~~~~~~~~~g   85 (260)
T PRK06603          9 KKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEI---GCNFVSELDVTNPKSISNLFDDIKEKWG   85 (260)
T ss_pred             cEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhc---CCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence            5799999997  7999999999999999999887632111222221111   123457899999988887764       


Q ss_pred             CCCEEEEecccccc--------CCCCchhhhhhhhhHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCCCcccCC
Q 039049           73 GVDGVFHTASPVLV--------PYDNNIQATLIDPCIKGTLNVLSSCKKA-KSVKRVVLTSSCSSIRYRHDAQQVSPLNE  143 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~E  143 (305)
                      ++|++||+|+....        ....+.+...+++|+.++..+++.+... ..-.++|++||.....+.+.         
T Consensus        86 ~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~---------  156 (260)
T PRK06603         86 SFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIPN---------  156 (260)
T ss_pred             CccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCCCc---------
Confidence            57999999987531        1134567778999999999999876432 12258999998654221111         


Q ss_pred             CCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCC
Q 039049          144 SHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTT  220 (305)
Q Consensus       144 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (305)
                                  ...|+.||...+.+.+.++.+   +++++..+.||.+-.+..... ..............+      .
T Consensus       157 ------------~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~p------~  217 (260)
T PRK06603        157 ------------YNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAI-GDFSTMLKSHAATAP------L  217 (260)
T ss_pred             ------------ccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcC-CCcHHHHHHHHhcCC------c
Confidence                        055999999999999888865   479999999999876532110 011111111111111      2


Q ss_pred             ccceeHHHHHHHHHHhhccc
Q 039049          221 VGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       221 ~~~i~v~D~a~~~~~~~~~~  240 (305)
                      ..+...+|+|+++.+++...
T Consensus       218 ~r~~~pedva~~~~~L~s~~  237 (260)
T PRK06603        218 KRNTTQEDVGGAAVYLFSEL  237 (260)
T ss_pred             CCCCCHHHHHHHHHHHhCcc
Confidence            33678999999999999753

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.77  E-value=1.4e-17  Score=142.67  Aligned_cols=197  Identities=18%  Similarity=0.169  Sum_probs=137.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhh-hhhccCccCceEEEEccCCC--cchHHH---Hhc--C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGF-LWELNGAEERLKIMKADLLM--EGSFDE---AIQ--G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d--~~~~~~---~~~--~   73 (305)
                      +.++||||+|.||++++++|+++|++|++++|++++...... +... ....++..+.+|+.+  .+.+.+   .+.  +
T Consensus        54 ~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~-~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~d  132 (320)
T PLN02780         54 SWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSK-YSKTQIKTVVVDFSGDIDEGVKRIKETIEGLD  132 (320)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHH-CCCcEEEEEEEECCCCcHHHHHHHHHHhcCCC
Confidence            679999999999999999999999999999998765433221 1111 112357778899975  233333   333  3


Q ss_pred             CCEEEEeccccccC------CCCchhhhhhhhhHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCCCcccCC
Q 039049           74 VDGVFHTASPVLVP------YDNNIQATLIDPCIKGTLNVLSSCKK----AKSVKRVVLTSSCSSIRYRHDAQQVSPLNE  143 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E  143 (305)
                      +|++|||||.....      ...+.....+++|+.++..+.+.+..    . +..++|++||...+....          
T Consensus       133 idilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~g~IV~iSS~a~~~~~~----------  201 (320)
T PLN02780        133 VGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIINIGSGAAIVIPS----------  201 (320)
T ss_pred             ccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-CCcEEEEEechhhccCCC----------
Confidence            56999999976421      13345567899999999999888643    3 557899999976532100          


Q ss_pred             CCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCC
Q 039049          144 SHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTT  220 (305)
Q Consensus       144 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (305)
                          .|.     ...|+.||.+.+.+.+.++.+.   |+++++++||.+-.+....             .+.       .
T Consensus       202 ----~p~-----~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~-------------~~~-------~  252 (320)
T PLN02780        202 ----DPL-----YAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASI-------------RRS-------S  252 (320)
T ss_pred             ----Ccc-----chHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccc-------------cCC-------C
Confidence                010     1669999999999998887664   7999999999987663210             000       0


Q ss_pred             ccceeHHHHHHHHHHhhcc
Q 039049          221 VGFVHIDDVVGAHILAMEE  239 (305)
Q Consensus       221 ~~~i~v~D~a~~~~~~~~~  239 (305)
                      ......+++|+.++..+..
T Consensus       253 ~~~~~p~~~A~~~~~~~~~  271 (320)
T PLN02780        253 FLVPSSDGYARAALRWVGY  271 (320)
T ss_pred             CCCCCHHHHHHHHHHHhCC
Confidence            1135789999999999864

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.77  E-value=7.9e-17  Score=135.19  Aligned_cols=219  Identities=15%  Similarity=0.050  Sum_probs=146.3

Q ss_pred             CcEEEeCCc--chHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            2 PEYCVTGGT--GFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~~--G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      |+++||||+  +.||.++++.|++.|++|++..|+.........+...   ......+++|+.|+++++++++       
T Consensus        11 k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   87 (272)
T PRK08159         11 KRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAE---LGAFVAGHCDVTDEASIDAVFETLEKKWG   87 (272)
T ss_pred             CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHh---cCCceEEecCCCCHHHHHHHHHHHHHhcC
Confidence            679999997  8999999999999999999887763222222222111   1235678999999988887664       


Q ss_pred             CCCEEEEecccccc--------CCCCchhhhhhhhhHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCCCcccCC
Q 039049           73 GVDGVFHTASPVLV--------PYDNNIQATLIDPCIKGTLNVLSSCKKA-KSVKRVVLTSSCSSIRYRHDAQQVSPLNE  143 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~E  143 (305)
                      .+|++|||||....        ....+.+...+++|+.++..+++.+... ..-.++|++||.....+.+          
T Consensus        88 ~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~p----------  157 (272)
T PRK08159         88 KLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVMP----------  157 (272)
T ss_pred             CCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCCC----------
Confidence            57999999997542        1134567888999999999999887543 1225899999864321111          


Q ss_pred             CCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCC
Q 039049          144 SHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTT  220 (305)
Q Consensus       144 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (305)
                            .     ...|+.+|...+.+.+.++.++   ++++..+.||.+..+..... .. .......... ..  +  .
T Consensus       158 ------~-----~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~-~~-~~~~~~~~~~-~~--p--~  219 (272)
T PRK08159        158 ------H-----YNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGI-GD-FRYILKWNEY-NA--P--L  219 (272)
T ss_pred             ------c-----chhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcC-Cc-chHHHHHHHh-CC--c--c
Confidence                  1     0559999999999998887764   79999999999876432111 00 0011111111 11  1  2


Q ss_pred             ccceeHHHHHHHHHHhhccccc--Cc-eEEEecC
Q 039049          221 VGFVHIDDVVGAHILAMEETRA--SG-RLICSSS  251 (305)
Q Consensus       221 ~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~~~  251 (305)
                      ..+..++|+|+++++++.....  .+ .+.+.+.
T Consensus       220 ~r~~~peevA~~~~~L~s~~~~~itG~~i~vdgG  253 (272)
T PRK08159        220 RRTVTIEEVGDSALYLLSDLSRGVTGEVHHVDSG  253 (272)
T ss_pred             cccCCHHHHHHHHHHHhCccccCccceEEEECCC
Confidence            2357899999999999975432  33 3455444

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.77  E-value=1.1e-16  Score=133.57  Aligned_cols=208  Identities=13%  Similarity=0.025  Sum_probs=140.9

Q ss_pred             CcEEEeCC--cchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            2 PEYCVTGG--TGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~--~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      ++++||||  ++.||.++++.|++.|++|++..|.....+....+....   .....+++|+.|++++.++++       
T Consensus         7 k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   83 (260)
T PRK06997          7 KRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF---GSDLVFPCDVASDEQIDALFASLGQHWD   83 (260)
T ss_pred             cEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhc---CCcceeeccCCCHHHHHHHHHHHHHHhC
Confidence            67999996  679999999999999999998866432222222221111   123468899999998887764       


Q ss_pred             CCCEEEEeccccccC---------CCCchhhhhhhhhHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCCCcccC
Q 039049           73 GVDGVFHTASPVLVP---------YDNNIQATLIDPCIKGTLNVLSSCKKA-KSVKRVVLTSSCSSIRYRHDAQQVSPLN  142 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~  142 (305)
                      .+|++|||||.....         ...+.+...+++|+.++..+.+++... ..-+++|++||.....+.+.        
T Consensus        84 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~~~--------  155 (260)
T PRK06997         84 GLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVVPN--------  155 (260)
T ss_pred             CCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCCCC--------
Confidence            579999999975421         123466778999999999998887543 12358999998654221111        


Q ss_pred             CCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCC
Q 039049          143 ESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNT  219 (305)
Q Consensus       143 E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (305)
                             .      ..|+.||...+.+.+.++.++   +++++.+.|+.+-.+.... ...............    +  
T Consensus       156 -------~------~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~-~~~~~~~~~~~~~~~----p--  215 (260)
T PRK06997        156 -------Y------NTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASG-IKDFGKILDFVESNA----P--  215 (260)
T ss_pred             -------c------chHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhcc-ccchhhHHHHHHhcC----c--
Confidence                   0      559999999999999888764   7999999999887643211 000011111111111    1  


Q ss_pred             CccceeHHHHHHHHHHhhccc
Q 039049          220 TVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       220 ~~~~i~v~D~a~~~~~~~~~~  240 (305)
                      ...+..++|+++++.+++..+
T Consensus       216 ~~r~~~pedva~~~~~l~s~~  236 (260)
T PRK06997        216 LRRNVTIEEVGNVAAFLLSDL  236 (260)
T ss_pred             ccccCCHHHHHHHHHHHhCcc
Confidence            223678999999999999754

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.77  E-value=2.1e-17  Score=129.68  Aligned_cols=166  Identities=20%  Similarity=0.229  Sum_probs=124.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhh-hhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGF-LWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      ++++|+||+|+||.++++.|+++|. .|+++.|+......... +........++.++.+|+.+.+.+.++++       
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5799999999999999999999996 68888887654332111 11222223467889999999887777654       


Q ss_pred             CCCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCC
Q 039049           73 GVDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSD  148 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~  148 (305)
                      .+|.|||+|+......    ..+.+...+++|+.++.++++++... +.+++|++||.....+....             
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~ii~~ss~~~~~~~~~~-------------  146 (180)
T smart00822       81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDL-PLDFFVLFSSVAGVLGNPGQ-------------  146 (180)
T ss_pred             CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccC-CcceEEEEccHHHhcCCCCc-------------
Confidence            3699999999754321    23456778999999999999999777 77899999997654332111             


Q ss_pred             cccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCcee
Q 039049          149 PDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVV  190 (305)
Q Consensus       149 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~  190 (305)
                              ..|+.+|...+.+++.. ...+++++.+.|+.+-
T Consensus       147 --------~~y~~sk~~~~~~~~~~-~~~~~~~~~~~~g~~~  179 (180)
T smart00822      147 --------ANYAAANAFLDALAAHR-RARGLPATSINWGAWA  179 (180)
T ss_pred             --------hhhHHHHHHHHHHHHHH-HhcCCceEEEeecccc
Confidence                    56999999999998554 5678999999888654

It uses NADPH to reduce the keto group to a hydroxy group.

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.76  E-value=7.6e-17  Score=138.08  Aligned_cols=231  Identities=15%  Similarity=0.133  Sum_probs=142.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC-CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG-HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      ++++||||++.||.++++.|++.| ++|++++|+.++..+...  .......++.++.+|+.|.+++.++++       +
T Consensus         4 k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~--~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   81 (314)
T TIGR01289         4 PTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAK--SLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP   81 (314)
T ss_pred             CEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH--HhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            579999999999999999999999 999999998654332211  111123467888999999888776653       5


Q ss_pred             CCEEEEeccccccC-----CCCchhhhhhhhhHHHHHHHHHHHHh----cC-CccEEEEeccceeeeccCCCCCCcccCC
Q 039049           74 VDGVFHTASPVLVP-----YDNNIQATLIDPCIKGTLNVLSSCKK----AK-SVKRVVLTSSCSSIRYRHDAQQVSPLNE  143 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~E  143 (305)
                      +|++|||||...+.     ...+.+...+++|+.++..+.+.+..    .+ +..+||++||...+..........+...
T Consensus        82 iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~  161 (314)
T TIGR01289        82 LDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANL  161 (314)
T ss_pred             CCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcccc
Confidence            89999999975421     13456677899999998888776543    21 1369999999876532100000000000


Q ss_pred             CC-------CCCc-----ccccccchhHHHHHHHHHHHHHHHHHH----cCCcEEEEecCceecCCCCCCCCchHHHHHH
Q 039049          144 SH-------WSDP-----DYCKHYNLWYAYAKTIAEKEAWRIAKD----CGIDMVVVNPSFVVGPLLAPQPTSTLLLILA  207 (305)
Q Consensus       144 ~~-------~~~~-----~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~  207 (305)
                      .+       +..+     .....+...|+.||.+...+.+.++++    .++.++.++||.+...............+..
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~~  241 (314)
T TIGR01289       162 GDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTLFP  241 (314)
T ss_pred             cccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHHHH
Confidence            00       0000     000011156999999988887777655    3699999999998533221111111111111


Q ss_pred             HHhcCCCCCCCCCccceeHHHHHHHHHHhhccc
Q 039049          208 MVKGLRGEYPNTTVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       208 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  240 (305)
                      ......      ...+..+++.++.++.++...
T Consensus       242 ~~~~~~------~~~~~~~~~~a~~l~~~~~~~  268 (314)
T TIGR01289       242 PFQKYI------TKGYVSEEEAGERLAQVVSDP  268 (314)
T ss_pred             HHHHHH------hccccchhhhhhhhHHhhcCc
Confidence            110000      012577899999998887653

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.76  E-value=1.7e-17  Score=138.26  Aligned_cols=209  Identities=14%  Similarity=0.082  Sum_probs=139.5

Q ss_pred             cEEEeCCcchHHHHHHHHHHH----cCCeEEEEEeCCCcccchhh-hhhccCccCceEEEEccCCCcchHHHHhcC----
Q 039049            3 EYCVTGGTGFIAAHLVKALLD----KGHMVRTTVRDPEDLSKVGF-LWELNGAEERLKIMKADLLMEGSFDEAIQG----   73 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~----~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~----   73 (305)
                      .++||||+|.||.+++++|++    .|++|+++.|+.+....... +... ....++.++.+|+.|.+++.++++.    
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   80 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAE-RSGLRVVRVSLDLGAEAGLEQLLKALREL   80 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhc-CCCceEEEEEeccCCHHHHHHHHHHHHhc
Confidence            589999999999999999997    79999999998654332211 1110 1123678899999999888776641    


Q ss_pred             -------CCEEEEeccccccC---C----CCchhhhhhhhhHHHHHHHHHHHHhc----CC-ccEEEEeccceeeeccCC
Q 039049           74 -------VDGVFHTASPVLVP---Y----DNNIQATLIDPCIKGTLNVLSSCKKA----KS-VKRVVLTSSCSSIRYRHD  134 (305)
Q Consensus        74 -------~d~Vi~~a~~~~~~---~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~-~~~~v~~SS~~~~~~~~~  134 (305)
                             .|+||||||.....   .    ..+.....+++|+.++..+.+.+...    .+ .+++|++||...+.+.+.
T Consensus        81 ~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~  160 (256)
T TIGR01500        81 PRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKG  160 (256)
T ss_pred             cccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCC
Confidence                   25899999974321   0    12456778999999998888776432    11 258999999764332211


Q ss_pred             CCCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCC--chHHHHHHHH
Q 039049          135 AQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPT--STLLLILAMV  209 (305)
Q Consensus       135 ~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~--~~~~~~~~~~  209 (305)
                      .                     ..|+.+|.+.+.+.+.++.+.   +++++.+.||.+-.+.......  ..........
T Consensus       161 ~---------------------~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  219 (256)
T TIGR01500       161 W---------------------ALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQ  219 (256)
T ss_pred             c---------------------hHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHH
Confidence            0                     569999999999999887663   7999999999886653110000  0000000000


Q ss_pred             hcCCCCCCCCCccceeHHHHHHHHHHhhcc
Q 039049          210 KGLRGEYPNTTVGFVHIDDVVGAHILAMEE  239 (305)
Q Consensus       210 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  239 (305)
                      ...+      ...+..++|+|.+++.++++
T Consensus       220 ~~~~------~~~~~~p~eva~~~~~l~~~  243 (256)
T TIGR01500       220 ELKA------KGKLVDPKVSAQKLLSLLEK  243 (256)
T ss_pred             HHHh------cCCCCCHHHHHHHHHHHHhc
Confidence            0000      22368899999999999963

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.75  E-value=1.2e-16  Score=143.67  Aligned_cols=215  Identities=16%  Similarity=0.050  Sum_probs=145.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|.||.++++.|+++|++|+++.|+.... ....+....    +..++++|+.|.+++.++++       ++
T Consensus       211 ~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~-~l~~~~~~~----~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i  285 (450)
T PRK08261        211 KVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGE-ALAAVANRV----GGTALALDITAPDAPARIAEHLAERHGGL  285 (450)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHH-HHHHHHHHc----CCeEEEEeCCCHHHHHHHHHHHHHhCCCC
Confidence            6799999999999999999999999999998854321 111111111    34678899999888877664       57


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      |+|||+|+......    ..+.+...+++|+.++.++.+.+...   ....+||++||...+.+....            
T Consensus       286 d~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~------------  353 (450)
T PRK08261        286 DIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQ------------  353 (450)
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCC------------
Confidence            99999999765432    34566778999999999999998663   122689999997754432211            


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccce
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFV  224 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  224 (305)
                               ..|+.+|...+.+++.++.+   .++++..+.|+.+-.+.... ..  . ........ ...    .....
T Consensus       354 ---------~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~-~~--~-~~~~~~~~-~~~----l~~~~  415 (450)
T PRK08261        354 ---------TNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAA-IP--F-ATREAGRR-MNS----LQQGG  415 (450)
T ss_pred             ---------hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhc-cc--h-hHHHHHhh-cCC----cCCCC
Confidence                     56999999888888777654   48999999999875432111 11  0 11111111 101    12234


Q ss_pred             eHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          225 HIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       225 ~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      -.+|++.++.+++.....   +..+.++|+
T Consensus       416 ~p~dva~~~~~l~s~~~~~itG~~i~v~g~  445 (450)
T PRK08261        416 LPVDVAETIAWLASPASGGVTGNVVRVCGQ  445 (450)
T ss_pred             CHHHHHHHHHHHhChhhcCCCCCEEEECCC
Confidence            567999999999864332   334555554

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.4e-16  Score=131.30  Aligned_cols=186  Identities=15%  Similarity=0.066  Sum_probs=126.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      ++++||||+|+||+++++.|+++|++|++++|+.......     ... . ....+.+|+.|.+++.+.+.++|++||||
T Consensus        15 k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~-----~~~-~-~~~~~~~D~~~~~~~~~~~~~iDilVnnA   87 (245)
T PRK12367         15 KRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSES-----NDE-S-PNEWIKWECGKEESLDKQLASLDVLILNH   87 (245)
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhh-----hcc-C-CCeEEEeeCCCHHHHHHhcCCCCEEEECC
Confidence            6899999999999999999999999999999976321110     001 1 22567899999999998888999999999


Q ss_pred             cccccCC-CCchhhhhhhhhHHHHHHHHHHHHhcC------CccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccc
Q 039049           82 SPVLVPY-DNNIQATLIDPCIKGTLNVLSSCKKAK------SVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKH  154 (305)
Q Consensus        82 ~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~------~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  154 (305)
                      |...... ..+.+...+++|+.++.++++.+...-      +...++..||.......                ..    
T Consensus        88 G~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~~----------------~~----  147 (245)
T PRK12367         88 GINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQPA----------------LS----  147 (245)
T ss_pred             ccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCCC----------------CC----
Confidence            9754322 355678889999999999999875420      12234344443211110                01    


Q ss_pred             cchhHHHHHHHHHHHHHHHHH-------HcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHH
Q 039049          155 YNLWYAYAKTIAEKEAWRIAK-------DCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHID  227 (305)
Q Consensus       155 ~~~~Y~~sK~~~E~~~~~~~~-------~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  227 (305)
                        ..|+.||.+.+.+. .+.+       ..++.+..+.|+.+..+..                         ....+..+
T Consensus       148 --~~Y~aSKaal~~~~-~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~-------------------------~~~~~~~~  199 (245)
T PRK12367        148 --PSYEISKRLIGQLV-SLKKNLLDKNERKKLIIRKLILGPFRSELN-------------------------PIGIMSAD  199 (245)
T ss_pred             --chhHHHHHHHHHHH-HHHHHHHHhhcccccEEEEecCCCcccccC-------------------------ccCCCCHH
Confidence              45999999976433 2222       3467777777766432210                         01147889


Q ss_pred             HHHHHHHHhhccccc
Q 039049          228 DVVGAHILAMEETRA  242 (305)
Q Consensus       228 D~a~~~~~~~~~~~~  242 (305)
                      |+|+.++.++++...
T Consensus       200 ~vA~~i~~~~~~~~~  214 (245)
T PRK12367        200 FVAKQILDQANLGLY  214 (245)
T ss_pred             HHHHHHHHHHhcCCc
Confidence            999999999976543

>PRK06484 short chain dehydrogenase; Validated

Probab=99.75  E-value=1.1e-16  Score=146.79  Aligned_cols=206  Identities=17%  Similarity=0.109  Sum_probs=144.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||++.||.++++.|++.|++|+++.|+.+......  ...   ..++.++++|+.|++++.++++       ++
T Consensus         6 k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~--~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (520)
T PRK06484          6 RVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERA--DSL---GPDHHALAMDVSDEAQIREGFEQLHREFGRI   80 (520)
T ss_pred             eEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--HHh---CCceeEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            67999999999999999999999999999999865433211  111   2357789999999988877664       58


Q ss_pred             CEEEEecccccc------CCCCchhhhhhhhhHHHHHHHHHHHHhc---CCc-cEEEEeccceeeeccCCCCCCcccCCC
Q 039049           75 DGVFHTASPVLV------PYDNNIQATLIDPCIKGTLNVLSSCKKA---KSV-KRVVLTSSCSSIRYRHDAQQVSPLNES  144 (305)
Q Consensus        75 d~Vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~-~~~v~~SS~~~~~~~~~~~~~~~~~E~  144 (305)
                      |++|||||...+      ....+.+...+++|+.++..+++++...   .+. .++|++||.....+.+..         
T Consensus        81 D~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~---------  151 (520)
T PRK06484         81 DVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKR---------  151 (520)
T ss_pred             CEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCC---------
Confidence            999999997321      1234567889999999999999887543   122 389999997654332111         


Q ss_pred             CCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCc
Q 039049          145 HWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTV  221 (305)
Q Consensus       145 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (305)
                                  ..|+.+|...+.+.+.++.+   .+++++.++|+.+..+...................  .  +  ..
T Consensus       152 ------------~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~--~--~--~~  213 (520)
T PRK06484        152 ------------TAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSR--I--P--LG  213 (520)
T ss_pred             ------------chHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhc--C--C--CC
Confidence                        56999999999999888766   37999999999887664221100000000011111  0  1  22


Q ss_pred             cceeHHHHHHHHHHhhcc
Q 039049          222 GFVHIDDVVGAHILAMEE  239 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~  239 (305)
                      .+...+|++.++.+++..
T Consensus       214 ~~~~~~~va~~v~~l~~~  231 (520)
T PRK06484        214 RLGRPEEIAEAVFFLASD  231 (520)
T ss_pred             CCcCHHHHHHHHHHHhCc
Confidence            356889999999998875

>PRK05599 hypothetical protein; Provisional

Probab=99.75  E-value=3e-16  Score=129.82  Aligned_cols=204  Identities=17%  Similarity=0.190  Sum_probs=138.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCcc-CceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAE-ERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |+++||||++.||.++++.|+ +|++|++++|+.++..+...  .....+ ..+.++++|+.|.++++++++       +
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~--~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   77 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLAS--DLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGE   77 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHH--HHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCC
Confidence            679999999999999999998 59999999998654433211  111112 247889999999888877653       5


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|++|||||......    ..+......++|+.+...++..+    .+...-.++|++||.....+.+.           
T Consensus        78 id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~-----------  146 (246)
T PRK05599         78 ISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRA-----------  146 (246)
T ss_pred             CCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcC-----------
Confidence            799999999864321    12223445677887777665443    33311358999999764322111           


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                          .      ..|+.+|...+.+.+.++.+.   +++++.+.||.+..+.....              .+    ...  
T Consensus       147 ----~------~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~--------------~~----~~~--  196 (246)
T PRK05599        147 ----N------YVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGM--------------KP----APM--  196 (246)
T ss_pred             ----C------cchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCC--------------CC----CCC--
Confidence                0      559999999999988887763   79999999998876532110              00    000  


Q ss_pred             ceeHHHHHHHHHHhhcccccCceEEEe
Q 039049          223 FVHIDDVVGAHILAMEETRASGRLICS  249 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~~~~~~~~~  249 (305)
                      ....+|+|++++.++++......+.+.
T Consensus       197 ~~~pe~~a~~~~~~~~~~~~~~~~~~~  223 (246)
T PRK05599        197 SVYPRDVAAAVVSAITSSKRSTTLWIP  223 (246)
T ss_pred             CCCHHHHHHHHHHHHhcCCCCceEEeC
Confidence            257899999999999986544444443

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.75  E-value=4e-16  Score=129.88  Aligned_cols=208  Identities=17%  Similarity=0.098  Sum_probs=139.1

Q ss_pred             CcEEEeCC--cchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            2 PEYCVTGG--TGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~--~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      ++++||||  ++.||.++++.|++.|++|++..|+... .....+....  ..++.++++|+.|++++.++++       
T Consensus         8 k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~-~~~~~~~~~~--~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   84 (256)
T PRK07889          8 KRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRAL-RLTERIAKRL--PEPAPVLELDVTNEEHLASLADRVREHVD   84 (256)
T ss_pred             CEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccch-hHHHHHHHhc--CCCCcEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            57999999  8999999999999999999999886421 1111111111  1256789999999988877653       


Q ss_pred             CCCEEEEeccccccC--------CCCchhhhhhhhhHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCCCcccCC
Q 039049           73 GVDGVFHTASPVLVP--------YDNNIQATLIDPCIKGTLNVLSSCKKA-KSVKRVVLTSSCSSIRYRHDAQQVSPLNE  143 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~E  143 (305)
                      ++|++|||||.....        ...+.+...+++|+.++..+.+.+... ..-.++|++|+....+             
T Consensus        85 ~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~~-------------  151 (256)
T PRK07889         85 GLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATVA-------------  151 (256)
T ss_pred             CCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeeccccc-------------
Confidence            589999999976321        123445567899999999888876542 1224788887532110             


Q ss_pred             CCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCC
Q 039049          144 SHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTT  220 (305)
Q Consensus       144 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (305)
                          .|.+     ..|+.||...+.+.+.++.+   +|++++.+.||.+-.+...... .............+  +   .
T Consensus       152 ----~~~~-----~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~p--~---~  216 (256)
T PRK07889        152 ----WPAY-----DWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIP-GFELLEEGWDERAP--L---G  216 (256)
T ss_pred             ----CCcc-----chhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhccc-CcHHHHHHHHhcCc--c---c
Confidence                0110     55999999999999888766   4799999999999776422111 00111111111111  0   1


Q ss_pred             ccceeHHHHHHHHHHhhccc
Q 039049          221 VGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       221 ~~~i~v~D~a~~~~~~~~~~  240 (305)
                      +.+..++|+|+++++++...
T Consensus       217 ~~~~~p~evA~~v~~l~s~~  236 (256)
T PRK07889        217 WDVKDPTPVARAVVALLSDW  236 (256)
T ss_pred             cccCCHHHHHHHHHHHhCcc
Confidence            24678999999999999764

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.74  E-value=5.9e-16  Score=127.28  Aligned_cols=195  Identities=12%  Similarity=0.081  Sum_probs=135.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC--CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHh---cCCCE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG--HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAI---QGVDG   76 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~---~~~d~   76 (305)
                      |+++||||+|+||++++++|+++|  ..|....|+....          ....++.++++|+.+.++++++.   .++|+
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~----------~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~   70 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD----------FQHDNVQWHALDVTDEAEIKQLSEQFTQLDW   70 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc----------cccCceEEEEecCCCHHHHHHHHHhcCCCCE
Confidence            589999999999999999999986  4565555544321          01236788999999988877654   47899


Q ss_pred             EEEeccccccCC----------CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCC
Q 039049           77 VFHTASPVLVPY----------DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNE  143 (305)
Q Consensus        77 Vi~~a~~~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E  143 (305)
                      ||||||......          ..+.+...+.+|+.++..+.+.+...   .+..+++++||...  ..         .+
T Consensus        71 li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~--~~---------~~  139 (235)
T PRK09009         71 LINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVG--SI---------SD  139 (235)
T ss_pred             EEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeeccc--cc---------cc
Confidence            999999875310          12335567899999998888877542   13468999887431  10         00


Q ss_pred             CCCCCcccccccchhHHHHHHHHHHHHHHHHHH-----cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCC
Q 039049          144 SHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD-----CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPN  218 (305)
Q Consensus       144 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (305)
                      ... .+.      ..|+.+|...+.+.+.++.+     .++++..+.|+.+..+....           .....+     
T Consensus       140 ~~~-~~~------~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~-----------~~~~~~-----  196 (235)
T PRK09009        140 NRL-GGW------YSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKP-----------FQQNVP-----  196 (235)
T ss_pred             CCC-CCc------chhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcc-----------hhhccc-----
Confidence            000 011      45999999999999888765     37889999999987765321           001111     


Q ss_pred             CCccceeHHHHHHHHHHhhcccc
Q 039049          219 TTVGFVHIDDVVGAHILAMEETR  241 (305)
Q Consensus       219 ~~~~~i~v~D~a~~~~~~~~~~~  241 (305)
                       ...++..+|+|+++..++....
T Consensus       197 -~~~~~~~~~~a~~~~~l~~~~~  218 (235)
T PRK09009        197 -KGKLFTPEYVAQCLLGIIANAT  218 (235)
T ss_pred             -cCCCCCHHHHHHHHHHHHHcCC
Confidence             2336789999999999998753

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.74  E-value=3.1e-16  Score=136.87  Aligned_cols=189  Identities=15%  Similarity=0.107  Sum_probs=128.0

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      +|+++||||+|+||+++++.|+++|++|++++|++++....  .   .....++..+.+|+.|.+.+.+.+.++|++|||
T Consensus       178 gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~--~---~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInn  252 (406)
T PRK07424        178 GKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLE--I---NGEDLPVKTLHWQVGQEAALAELLEKVDILIIN  252 (406)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--H---hhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEEC
Confidence            47899999999999999999999999999999876532211  1   111224678889999999999999999999999


Q ss_pred             ccccccC-CCCchhhhhhhhhHHHHHHHHHHHHhc---CC---cc-EEEEeccceeeeccCCCCCCcccCCCCCCCcccc
Q 039049           81 ASPVLVP-YDNNIQATLIDPCIKGTLNVLSSCKKA---KS---VK-RVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYC  152 (305)
Q Consensus        81 a~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~---~~-~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~  152 (305)
                      ||..... ...+.....+++|+.++.++++++...   .+   .+ .+|.+|+.. ... +.               .  
T Consensus       253 AGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~-~~~-~~---------------~--  313 (406)
T PRK07424        253 HGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAE-VNP-AF---------------S--  313 (406)
T ss_pred             CCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcccc-ccC-CC---------------c--
Confidence            9975432 234466778999999999999987432   11   12 245544321 110 00               0  


Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHHH
Q 039049          153 KHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGA  232 (305)
Q Consensus       153 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  232 (305)
                          ..|+.||.+.+.+......+.++.+..+.|    ||.... .            +        ....+..+|+|+.
T Consensus       314 ----~~Y~ASKaAl~~l~~l~~~~~~~~I~~i~~----gp~~t~-~------------~--------~~~~~spe~vA~~  364 (406)
T PRK07424        314 ----PLYELSKRALGDLVTLRRLDAPCVVRKLIL----GPFKSN-L------------N--------PIGVMSADWVAKQ  364 (406)
T ss_pred             ----hHHHHHHHHHHHHHHHHHhCCCCceEEEEe----CCCcCC-C------------C--------cCCCCCHHHHHHH
Confidence                459999999988754333334544444444    332211 0            0        1124789999999


Q ss_pred             HHHhhccccc
Q 039049          233 HILAMEETRA  242 (305)
Q Consensus       233 ~~~~~~~~~~  242 (305)
                      ++.+++++..
T Consensus       365 il~~i~~~~~  374 (406)
T PRK07424        365 ILKLAKRDFR  374 (406)
T ss_pred             HHHHHHCCCC
Confidence            9999987543

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.73  E-value=4.4e-17  Score=126.74  Aligned_cols=152  Identities=18%  Similarity=0.164  Sum_probs=118.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC-CeEEEEEeCCCcccchhh-hhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG-HMVRTTVRDPEDLSKVGF-LWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      |+++||||+|-||++++++|+++| +.|+++.|+. +.+.... .........++.++++|+.+.++++++++       
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~-~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSE-DSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFG   79 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSC-HHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecc-cccccccccccccccccccccccccccccccccccccccccccc
Confidence            679999999999999999999995 5788888881 1111111 22223334689999999999988888765       


Q ss_pred             CCCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCC
Q 039049           73 GVDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSD  148 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~  148 (305)
                      .+|++|||||......    ..+.....+++|+.+...+.+++... +-+++|++||.....+.+..             
T Consensus        80 ~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~g~iv~~sS~~~~~~~~~~-------------  145 (167)
T PF00106_consen   80 PLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQ-GGGKIVNISSIAGVRGSPGM-------------  145 (167)
T ss_dssp             SESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHH-TTEEEEEEEEGGGTSSSTTB-------------
T ss_pred             cccccccccccccccccccccchhhhhccccccceeeeeeehheec-cccceEEecchhhccCCCCC-------------
Confidence            5799999999987543    24566789999999999999998885 66799999998755443221             


Q ss_pred             cccccccchhHHHHHHHHHHHHHHHHHH
Q 039049          149 PDYCKHYNLWYAYAKTIAEKEAWRIAKD  176 (305)
Q Consensus       149 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~  176 (305)
                              ..|+.+|.+.+.+.+.++++
T Consensus       146 --------~~Y~askaal~~~~~~la~e  165 (167)
T PF00106_consen  146 --------SAYSASKAALRGLTQSLAAE  165 (167)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHH
T ss_pred             --------hhHHHHHHHHHHHHHHHHHh
Confidence                    66999999999999988765

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.73  E-value=1.5e-16  Score=130.32  Aligned_cols=168  Identities=20%  Similarity=0.166  Sum_probs=125.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccch-hhhhhccCccCceEEEEccCCCcchHHHHh-------cC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKV-GFLWELNGAEERLKIMKADLLMEGSFDEAI-------QG   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-------~~   73 (305)
                      |.|+||||+..||.+++.+|+++|.+++.+.|..+..+.. ..+...-... ++..+++|+.|.+++.+.+       .+
T Consensus        13 kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~-~v~~~~~Dvs~~~~~~~~~~~~~~~fg~   91 (282)
T KOG1205|consen   13 KVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLE-KVLVLQLDVSDEESVKKFVEWAIRHFGR   91 (282)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcC-ccEEEeCccCCHHHHHHHHHHHHHhcCC
Confidence            6799999999999999999999999999998887766655 3333322222 6999999999999888665       37


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|++|||||......    ..+.....+++|+.|+..+.+++-    +. +-.++|.+||...+...+..          
T Consensus        92 vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r-~~GhIVvisSiaG~~~~P~~----------  160 (282)
T KOG1205|consen   92 VDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKR-NDGHIVVISSIAGKMPLPFR----------  160 (282)
T ss_pred             CCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhc-CCCeEEEEeccccccCCCcc----------
Confidence            899999999887432    334456689999999988888763    33 44699999998755443221          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcEE----EEecCceecC
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMV----VVNPSFVVGP  192 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~----i~Rp~~v~G~  192 (305)
                                 ..|..||.+.+.+...+..+..-..+    ++-||.|-..
T Consensus       161 -----------~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~Te  200 (282)
T KOG1205|consen  161 -----------SIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPIETE  200 (282)
T ss_pred             -----------cccchHHHHHHHHHHHHHHHhhccCceEEEEEecCceeec
Confidence                       45999999999998888766532222    3667766444

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.71  E-value=8.1e-16  Score=130.94  Aligned_cols=216  Identities=14%  Similarity=0.052  Sum_probs=138.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcc-------cchhhhh-hccCccCceEEEEccCCCcchHHHHhc-
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDL-------SKVGFLW-ELNGAEERLKIMKADLLMEGSFDEAIQ-   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~-------~~~~~~~-~~~~~~~~~~~~~~D~~d~~~~~~~~~-   72 (305)
                      |+++||||++.||.++++.|++.|++|+++.|+....       .....+. .......++.++++|+.|++++.++++ 
T Consensus         9 k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~   88 (305)
T PRK08303          9 KVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALVER   88 (305)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence            6899999999999999999999999999999974321       1111111 111223357789999999988887664 


Q ss_pred             ------CCCEEEEec-cccc-----cC---CCCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCC
Q 039049           73 ------GVDGVFHTA-SPVL-----VP---YDNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHD  134 (305)
Q Consensus        73 ------~~d~Vi~~a-~~~~-----~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~  134 (305)
                            ++|++|||| +...     ..   ...+.+...+++|+.++..+.+++...   .+-.++|++||........ 
T Consensus        89 ~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~~~-  167 (305)
T PRK08303         89 IDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYNAT-  167 (305)
T ss_pred             HHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccccCc-
Confidence                  579999999 6421     11   123445667889999988888776432   1335899999865321100 


Q ss_pred             CCCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhc
Q 039049          135 AQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKG  211 (305)
Q Consensus       135 ~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~  211 (305)
                           +.      ...      ..|+.+|.....+.+.++.+.   ++++..+.||.+-.+............+......
T Consensus       168 -----~~------~~~------~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  230 (305)
T PRK08303        168 -----HY------RLS------VFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDALAK  230 (305)
T ss_pred             -----CC------CCc------chhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhhcc
Confidence                 00      001      459999999999988887664   7999999999886542100000000000000000


Q ss_pred             CCCCCCCCCccceeHHHHHHHHHHhhccc
Q 039049          212 LRGEYPNTTVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       212 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  240 (305)
                          .+. ..-+...+|++.++++++..+
T Consensus       231 ----~p~-~~~~~~peevA~~v~fL~s~~  254 (305)
T PRK08303        231 ----EPH-FAISETPRYVGRAVAALAADP  254 (305)
T ss_pred             ----ccc-cccCCCHHHHHHHHHHHHcCc
Confidence                010 122457899999999999765

>PLN00015 protochlorophyllide reductase

Probab=99.71  E-value=8.3e-16  Score=131.39  Aligned_cols=227  Identities=15%  Similarity=0.122  Sum_probs=138.7

Q ss_pred             EEeCCcchHHHHHHHHHHHcC-CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CCCE
Q 039049            5 CVTGGTGFIAAHLVKALLDKG-HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GVDG   76 (305)
Q Consensus         5 lItG~~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~   76 (305)
                      +||||++.||.+++++|++.| ++|++..|+.+......  ........++.++++|+.|.+++.++++       .+|+
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~--~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~   78 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAA--KSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDV   78 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH--HHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCE
Confidence            699999999999999999999 99999999765332211  1111123367888999999988777653       5799


Q ss_pred             EEEeccccccC-----CCCchhhhhhhhhHHHHHHHHHHHHhc---CC--ccEEEEeccceeeeccC--C-CCC---Cc-
Q 039049           77 VFHTASPVLVP-----YDNNIQATLIDPCIKGTLNVLSSCKKA---KS--VKRVVLTSSCSSIRYRH--D-AQQ---VS-  139 (305)
Q Consensus        77 Vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~--~~~~v~~SS~~~~~~~~--~-~~~---~~-  139 (305)
                      +|||||.....     ...+.+...+++|+.++..+.+.+...   .+  .+++|++||...+....  . .+.   .. 
T Consensus        79 lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~  158 (308)
T PLN00015         79 LVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDL  158 (308)
T ss_pred             EEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhh
Confidence            99999975321     134566788999999988887665332   13  46999999976532100  0 000   00 


Q ss_pred             -----ccCCCC---CCCcccccccchhHHHHHHHHHHHHHHHHHH----cCCcEEEEecCceecCCCCCCCCchHHHHHH
Q 039049          140 -----PLNESH---WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD----CGIDMVVVNPSFVVGPLLAPQPTSTLLLILA  207 (305)
Q Consensus       140 -----~~~E~~---~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~  207 (305)
                           +..+..   +.... .......|+.||.+.+.+.+.++++    .++.++.+.||.|...............+..
T Consensus       159 ~~~~~~~~~~~~~~~~~~~-~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~  237 (308)
T PLN00015        159 RGLAGGLNGLNSSAMIDGG-EFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFP  237 (308)
T ss_pred             hhhhcccCCccchhhcccc-CCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHHH
Confidence                 000000   00000 0001156999999977776767665    3799999999999543221111111111100


Q ss_pred             HHhcCCCCCCCCCccceeHHHHHHHHHHhhccc
Q 039049          208 MVKGLRGEYPNTTVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       208 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  240 (305)
                      .....+      ...+..+++.|+.++.++...
T Consensus       238 ~~~~~~------~~~~~~pe~~a~~~~~l~~~~  264 (308)
T PLN00015        238 PFQKYI------TKGYVSEEEAGKRLAQVVSDP  264 (308)
T ss_pred             HHHHHH------hcccccHHHhhhhhhhhcccc
Confidence            000000      112467899999999887653

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=99.69  E-value=2e-16  Score=122.23  Aligned_cols=263  Identities=15%  Similarity=0.112  Sum_probs=172.6

Q ss_pred             EEEeCCcchHHHHHHH-----HHHHcC----CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCC
Q 039049            4 YCVTGGTGFIAAHLVK-----ALLDKG----HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGV   74 (305)
Q Consensus         4 ilItG~~G~iG~~l~~-----~l~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~   74 (305)
                      .++-+++|+|+..|..     ++-+.+    |+|++++|++.+.              ++++-..|....-      -++
T Consensus        15 a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~--------------ritw~el~~~Gip------~sc   74 (315)
T KOG3019|consen   15 AVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKA--------------RITWPELDFPGIP------ISC   74 (315)
T ss_pred             CCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCc--------------ccccchhcCCCCc------eeh
Confidence            4566889999988877     444444    8999999998743              3333333332211      033


Q ss_pred             CEEEEecc----ccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCC-ccEEEEeccceeeeccCCCCCCcccCCCCCCCc
Q 039049           75 DGVFHTAS----PVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKS-VKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDP  149 (305)
Q Consensus        75 d~Vi~~a~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~  149 (305)
                      +.++|+++    ......+..-..+.+..-+..+..|.++...+.. .+.+|.+|..++|-+...    ..++|+++...
T Consensus        75 ~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s----~eY~e~~~~qg  150 (315)
T KOG3019|consen   75 VAGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSES----QEYSEKIVHQG  150 (315)
T ss_pred             HHHHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccc----cccccccccCC
Confidence            44444444    3332223444455666667788999999888753 447999999887665432    56788877665


Q ss_pred             ccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHH
Q 039049          150 DYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDV  229 (305)
Q Consensus       150 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  229 (305)
                      .      +....--..=|...+...+  .++++++|.|.|.|.+....  ..+....++..|.++..|.+.++|||++|+
T Consensus       151 f------d~~srL~l~WE~aA~~~~~--~~r~~~iR~GvVlG~gGGa~--~~M~lpF~~g~GGPlGsG~Q~fpWIHv~DL  220 (315)
T KOG3019|consen  151 F------DILSRLCLEWEGAALKANK--DVRVALIRIGVVLGKGGGAL--AMMILPFQMGAGGPLGSGQQWFPWIHVDDL  220 (315)
T ss_pred             h------HHHHHHHHHHHHHhhccCc--ceeEEEEEEeEEEecCCcch--hhhhhhhhhccCCcCCCCCeeeeeeehHHH
Confidence            4      3332222222333322222  48999999999999875432  222334566667787778889999999999


Q ss_pred             HHHHHHhhcccccCceEEEe-cCCcCHHHHHHHHHHhCCC---CCCCCCCCC-------CCCCCCCcccchhHHHHhCCC
Q 039049          230 VGAHILAMEETRASGRLICS-SSVAHWSPIIEMLKATYPS---YPYESKCSK-------QEGDNSPHSMDTSKLFELGFV  298 (305)
Q Consensus       230 a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~---~~~~~~~~~-------~~~~~~~~~~~~~~~~~lg~~  298 (305)
                      +..+..+++++.-.++.|.. .+..+..||++.+..++++   +++|....+       ...-.....+-..|+.++|| 
T Consensus       221 ~~li~~ale~~~v~GViNgvAP~~~~n~Ef~q~lg~aL~Rp~~~pvP~fvvqA~fG~erA~~vLeGqKV~Pqral~~Gf-  299 (315)
T KOG3019|consen  221 VNLIYEALENPSVKGVINGVAPNPVRNGEFCQQLGSALSRPSWLPVPDFVVQALFGPERATVVLEGQKVLPQRALELGF-  299 (315)
T ss_pred             HHHHHHHHhcCCCCceecccCCCccchHHHHHHHHHHhCCCcccCCcHHHHHHHhCccceeEEeeCCcccchhHhhcCc-
Confidence            99999999999889999975 7899999999999999965   355543221       11112345556677777888 


Q ss_pred             ccc
Q 039049          299 GFK  301 (305)
Q Consensus       299 ~~~  301 (305)
                      ++.
T Consensus       300 ~f~  302 (315)
T KOG3019|consen  300 EFK  302 (315)
T ss_pred             eee
Confidence            765

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.69  E-value=6.2e-15  Score=119.76  Aligned_cols=199  Identities=13%  Similarity=0.069  Sum_probs=148.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      +.||||||.+.+|+.++.+|+++|.++.+.+.+.+...+........   +.+..+.+|+++.+++.+..+       ++
T Consensus        39 ~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~---g~~~~y~cdis~~eei~~~a~~Vk~e~G~V  115 (300)
T KOG1201|consen   39 EIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI---GEAKAYTCDISDREEIYRLAKKVKKEVGDV  115 (300)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc---CceeEEEecCCCHHHHHHHHHHHHHhcCCc
Confidence            57999999999999999999999999999988877655433322211   268899999999998877664       67


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |++|||||......    ..+..+..+++|+.+.....++.    .+. +-.++|.++|+....+...-           
T Consensus       116 ~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~-~~GHIV~IaS~aG~~g~~gl-----------  183 (300)
T KOG1201|consen  116 DILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLEN-NNGHIVTIASVAGLFGPAGL-----------  183 (300)
T ss_pred             eEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhc-CCceEEEehhhhcccCCccc-----------
Confidence            99999999988754    45566778999999887766664    343 45699999998766554332           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc------CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCC
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC------GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTT  220 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~------~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (305)
                                ..|..||.++.-+.+.+..+.      +++++.+.|+.+=...-               .+ ....+. .
T Consensus       184 ----------~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf---------------~~-~~~~~~-l  236 (300)
T KOG1201|consen  184 ----------ADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMF---------------DG-ATPFPT-L  236 (300)
T ss_pred             ----------hhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeecccccc---------------CC-CCCCcc-c
Confidence                      569999999998887776442      68888888887642211               11 111111 5


Q ss_pred             ccceeHHHHHHHHHHhhccccc
Q 039049          221 VGFVHIDDVVGAHILAMEETRA  242 (305)
Q Consensus       221 ~~~i~v~D~a~~~~~~~~~~~~  242 (305)
                      .+.+..+-+|+-++.+++..+.
T Consensus       237 ~P~L~p~~va~~Iv~ai~~n~~  258 (300)
T KOG1201|consen  237 APLLEPEYVAKRIVEAILTNQA  258 (300)
T ss_pred             cCCCCHHHHHHHHHHHHHcCCc
Confidence            6789999999999999987665

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.66  E-value=6.4e-15  Score=111.39  Aligned_cols=206  Identities=16%  Similarity=0.114  Sum_probs=146.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      +..+||||+..||+++++.|++.|++|.+..++....+.....  ++. ..+-..+.+|..+..++...++       .+
T Consensus        15 k~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~--L~g-~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~p   91 (256)
T KOG1200|consen   15 KVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGD--LGG-YGDHSAFSCDVSKAHDVQNTLEEMEKSLGTP   91 (256)
T ss_pred             ceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhh--cCC-CCccceeeeccCcHHHHHHHHHHHHHhcCCC
Confidence            4589999999999999999999999999999887644433222  222 1245678899999888777654       57


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc-----CCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA-----KSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      ++++||||+.....    .++.|+..+.+|+.+...+.+++.+.     .+.-++|.+||.----++..  +        
T Consensus        92 svlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~G--Q--------  161 (256)
T KOG1200|consen   92 SVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFG--Q--------  161 (256)
T ss_pred             cEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccccccc--c--------
Confidence            99999999988653    57889999999999999999887654     12238999999632222211  1        


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHH---HcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAK---DCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                                 +.|+.+|.-.--+-+.+++   ..++++.++.|+.|-.|....   .+...+.++....|      ...
T Consensus       162 -----------tnYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~---mp~~v~~ki~~~iP------mgr  221 (256)
T KOG1200|consen  162 -----------TNYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEA---MPPKVLDKILGMIP------MGR  221 (256)
T ss_pred             -----------hhhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhh---cCHHHHHHHHccCC------ccc
Confidence                       5587777544333333332   348999999999998886432   22344555554444      455


Q ss_pred             ceeHHHHHHHHHHhhccc
Q 039049          223 FVHIDDVVGAHILAMEET  240 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~  240 (305)
                      +-..+|+|..+++++...
T Consensus       222 ~G~~EevA~~V~fLAS~~  239 (256)
T KOG1200|consen  222 LGEAEEVANLVLFLASDA  239 (256)
T ss_pred             cCCHHHHHHHHHHHhccc
Confidence            678899999999998543

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.66  E-value=6.2e-15  Score=120.29  Aligned_cols=165  Identities=10%  Similarity=0.023  Sum_probs=118.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--------~   73 (305)
                      ++++||||++.||+++++.|++.|++|+++.|+.+...+....  .......+..+++|+.|.+++.++++        .
T Consensus         6 k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~--i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   83 (227)
T PRK08862          6 SIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQ--CSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA   83 (227)
T ss_pred             eEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH--HHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            6899999999999999999999999999999987644332111  11113357788899999888876652        5


Q ss_pred             CCEEEEeccccccCC-----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCC
Q 039049           74 VDGVFHTASPVLVPY-----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNES  144 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~  144 (305)
                      +|++||+||......     ..+.....+++|+.++..+++.+.    +.++...+|++||.....   .          
T Consensus        84 iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~---~----------  150 (227)
T PRK08862         84 PDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDHQ---D----------  150 (227)
T ss_pred             CCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCCC---C----------
Confidence            899999998543221     223445566778887777655542    321235899999854211   0          


Q ss_pred             CCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecC
Q 039049          145 HWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGP  192 (305)
Q Consensus       145 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~  192 (305)
                           .      ..|+.+|...+.+.+.++.+   +++++..+.||.+-.+
T Consensus       151 -----~------~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~  190 (227)
T PRK08862        151 -----L------TGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN  190 (227)
T ss_pred             -----c------chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence                 0      55999999999998888765   4899999999988776

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.66  E-value=1.2e-14  Score=122.59  Aligned_cols=222  Identities=18%  Similarity=0.102  Sum_probs=151.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++|||||+.||.++++.|+.+|.+|+...|+.+...+............++.++++|+.+.+++.+..+       ..
T Consensus        36 ~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~~l  115 (314)
T KOG1208|consen   36 KVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEGPL  115 (314)
T ss_pred             cEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCCCc
Confidence            57999999999999999999999999999999985444332222223345578889999999888777553       56


Q ss_pred             CEEEEeccccccCC--CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCC
Q 039049           75 DGVFHTASPVLVPY--DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSD  148 (305)
Q Consensus        75 d~Vi~~a~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~  148 (305)
                      |+.|||||.+....  ..+..+..+.+|..|...|.+.+    +.. ...|+|++||..- +.....  .....|.....
T Consensus       116 dvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s-~~~RIV~vsS~~~-~~~~~~--~~l~~~~~~~~  191 (314)
T KOG1208|consen  116 DVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRS-APSRIVNVSSILG-GGKIDL--KDLSGEKAKLY  191 (314)
T ss_pred             cEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhC-CCCCEEEEcCccc-cCccch--hhccchhccCc
Confidence            99999999998765  45678889999999988887765    333 3269999999763 111000  11222222101


Q ss_pred             cccccccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeH
Q 039049          149 PDYCKHYNLWYAYAKTIAEKEAWRIAKDC--GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHI  226 (305)
Q Consensus       149 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  226 (305)
                      ..     ...|+.||.+......+++++.  |+.+..+-||.+..+.... .......+...+....         +-..
T Consensus       192 ~~-----~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r-~~~~~~~l~~~l~~~~---------~ks~  256 (314)
T KOG1208|consen  192 SS-----DAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLSR-VNLLLRLLAKKLSWPL---------TKSP  256 (314)
T ss_pred             cc-----hhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccceec-chHHHHHHHHHHHHHh---------ccCH
Confidence            11     0349999999998888888776  6999999999998885443 1222221222211110         1356


Q ss_pred             HHHHHHHHHhhccccc
Q 039049          227 DDVVGAHILAMEETRA  242 (305)
Q Consensus       227 ~D~a~~~~~~~~~~~~  242 (305)
                      +.-|+.++.++.+++.
T Consensus       257 ~~ga~t~~~~a~~p~~  272 (314)
T KOG1208|consen  257 EQGAATTCYAALSPEL  272 (314)
T ss_pred             HHHhhheehhccCccc
Confidence            7778888888887753

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.64  E-value=8.2e-14  Score=117.79  Aligned_cols=211  Identities=13%  Similarity=-0.003  Sum_probs=136.6

Q ss_pred             CcEEEeCC--cchHHHHHHHHHHHcCCeEEEEEeCCCcccchhh-hhh--------ccCc--cCceEEEEccC--CCcc-
Q 039049            2 PEYCVTGG--TGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGF-LWE--------LNGA--EERLKIMKADL--LMEG-   65 (305)
Q Consensus         2 ~~ilItG~--~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~--------~~~~--~~~~~~~~~D~--~d~~-   65 (305)
                      |+++||||  +..||.++++.|++.|.+|++ .|+....+.... +..        ....  ......+.+|+  .+.+ 
T Consensus        10 k~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   88 (303)
T PLN02730         10 KRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDTPED   88 (303)
T ss_pred             CEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCcccc
Confidence            68999999  799999999999999999988 665443322110 100        0100  11235677888  3333 


Q ss_pred             -----------------hHHHHhc-------CCCEEEEecccccc------CCCCchhhhhhhhhHHHHHHHHHHHHhcC
Q 039049           66 -----------------SFDEAIQ-------GVDGVFHTASPVLV------PYDNNIQATLIDPCIKGTLNVLSSCKKAK  115 (305)
Q Consensus        66 -----------------~~~~~~~-------~~d~Vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  115 (305)
                                       ++.++++       ++|++|||||....      ....+.+...+++|+.++..+.+++...-
T Consensus        89 ~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~m  168 (303)
T PLN02730         89 VPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIM  168 (303)
T ss_pred             CchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence                             4555443       57999999975321      12456788899999999999998875431


Q ss_pred             -CccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc----CCcEEEEecCcee
Q 039049          116 -SVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC----GIDMVVVNPSFVV  190 (305)
Q Consensus       116 -~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~i~Rp~~v~  190 (305)
                       .-.++|++||.......+..              .      ..|+.||...+.+.+.++.+.    ++++..+-||.+-
T Consensus       169 ~~~G~II~isS~a~~~~~p~~--------------~------~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~  228 (303)
T PLN02730        169 NPGGASISLTYIASERIIPGY--------------G------GGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLG  228 (303)
T ss_pred             hcCCEEEEEechhhcCCCCCC--------------c------hhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCcc
Confidence             11589999997643221110              0      359999999999998888653    6899999999887


Q ss_pred             cCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhccc
Q 039049          191 GPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       191 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  240 (305)
                      .+.... ..............  .  +  ...+...+|++.++++++...
T Consensus       229 T~~~~~-~~~~~~~~~~~~~~--~--p--l~r~~~peevA~~~~fLaS~~  271 (303)
T PLN02730        229 SRAAKA-IGFIDDMIEYSYAN--A--P--LQKELTADEVGNAAAFLASPL  271 (303)
T ss_pred             Cchhhc-ccccHHHHHHHHhc--C--C--CCCCcCHHHHHHHHHHHhCcc
Confidence            764321 11111111111111  1  1  123578999999999999753

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.63  E-value=6e-14  Score=116.55  Aligned_cols=218  Identities=16%  Similarity=0.145  Sum_probs=149.1

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchh-hhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVG-FLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      +|.++||||+..||+++|++|++.|.+|++..|+.+...... .+...-...+++..+.+|+.+.++.+++++       
T Consensus         8 gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~~   87 (270)
T KOG0725|consen    8 GKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKFF   87 (270)
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHhC
Confidence            368999999999999999999999999999999987543222 222221224468899999998776665543       


Q ss_pred             -CCCEEEEeccccccC-----CCCchhhhhhhhhHHH-HHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccC
Q 039049           73 -GVDGVFHTASPVLVP-----YDNNIQATLIDPCIKG-TLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLN  142 (305)
Q Consensus        73 -~~d~Vi~~a~~~~~~-----~~~~~~~~~~~~n~~~-~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~  142 (305)
                       ++|++||+||.....     .+.+.++..+++|+.| ...+...+...   ++...++++||...+......       
T Consensus        88 GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~-------  160 (270)
T KOG0725|consen   88 GKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGS-------  160 (270)
T ss_pred             CCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCC-------
Confidence             589999999987754     2567788899999995 55555554332   144578998887644332110       


Q ss_pred             CCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCC-chHHHHHHH-HhcCCCCCC
Q 039049          143 ESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPT-STLLLILAM-VKGLRGEYP  217 (305)
Q Consensus       143 E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~-~~~~~~~~~-~~~~~~~~~  217 (305)
                             .      ..|+.+|...+.+.+.++.+   +++++..+-|+.+..+....... .....+... .......  
T Consensus       161 -------~------~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p--  225 (270)
T KOG0725|consen  161 -------G------VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVP--  225 (270)
T ss_pred             -------c------ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccc--
Confidence                   0      34999999999999888866   48999999999999886111111 000111111 0111111  


Q ss_pred             CCCccceeHHHHHHHHHHhhccccc
Q 039049          218 NTTVGFVHIDDVVGAHILAMEETRA  242 (305)
Q Consensus       218 ~~~~~~i~v~D~a~~~~~~~~~~~~  242 (305)
                        .-.+.-.+|++..+..++.....
T Consensus       226 --~gr~g~~~eva~~~~fla~~~as  248 (270)
T KOG0725|consen  226 --LGRVGTPEEVAEAAAFLASDDAS  248 (270)
T ss_pred             --cCCccCHHHHHHhHHhhcCcccc
Confidence              34468899999999999887543

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.63  E-value=6.3e-15  Score=114.25  Aligned_cols=215  Identities=16%  Similarity=0.113  Sum_probs=153.2

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEecc
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTAS   82 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a~   82 (305)
                      ..++.|++||.|+++++.....++.|-.+.|+..+.-    +++.   ...+++.++|.....-+...+.++..++-+++
T Consensus        54 ~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~~----l~sw---~~~vswh~gnsfssn~~k~~l~g~t~v~e~~g  126 (283)
T KOG4288|consen   54 WTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQT----LSSW---PTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMG  126 (283)
T ss_pred             HHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcch----hhCC---CcccchhhccccccCcchhhhcCCcccHHHhc
Confidence            4688999999999999999999999999999865321    1111   22677788887766656667778899998988


Q ss_pred             ccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHHHH
Q 039049           83 PVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYA  162 (305)
Q Consensus        83 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~s  162 (305)
                      ...      +...+.++|-....+-.++++++ |+++|+|+|... ++-.+..              .      ..|-.+
T Consensus       127 gfg------n~~~m~~ing~ani~a~kaa~~~-gv~~fvyISa~d-~~~~~~i--------------~------rGY~~g  178 (283)
T KOG4288|consen  127 GFG------NIILMDRINGTANINAVKAAAKA-GVPRFVYISAHD-FGLPPLI--------------P------RGYIEG  178 (283)
T ss_pred             Ccc------chHHHHHhccHhhHHHHHHHHHc-CCceEEEEEhhh-cCCCCcc--------------c------hhhhcc
Confidence            754      45567888999999999999999 999999999754 3221110              0      569999


Q ss_pred             HHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCch-------HHHHHHHHhc---CCCCCCCCCccceeHHHHHHH
Q 039049          163 KTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTST-------LLLILAMVKG---LRGEYPNTTVGFVHIDDVVGA  232 (305)
Q Consensus       163 K~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~-------~~~~~~~~~~---~~~~~~~~~~~~i~v~D~a~~  232 (305)
                      |+++|..+..   .++.+-+++|||.+||...-......       ..++.+....   +...++.-....+.++++|.+
T Consensus       179 KR~AE~Ell~---~~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~a  255 (283)
T KOG4288|consen  179 KREAEAELLK---KFRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALA  255 (283)
T ss_pred             chHHHHHHHH---hcCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHH
Confidence            9999988765   45688999999999998432222111       1222222211   112234448899999999999


Q ss_pred             HHHhhcccccCceEEEecCCcCHHHHHHHH
Q 039049          233 HILAMEETRASGRLICSSSVAHWSPIIEML  262 (305)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~s~~el~~~i  262 (305)
                      .+.+++++.-.|+       +++.|+.+..
T Consensus       256 al~ai~dp~f~Gv-------v~i~eI~~~a  278 (283)
T KOG4288|consen  256 ALKAIEDPDFKGV-------VTIEEIKKAA  278 (283)
T ss_pred             HHHhccCCCcCce-------eeHHHHHHHH
Confidence            9999998765444       4455554443

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.63  E-value=9.4e-15  Score=114.83  Aligned_cols=163  Identities=21%  Similarity=0.264  Sum_probs=117.4

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCC-CcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDP-EDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      +++||||+|.||..+++.|+++|. +|++++|+. ........+..+.....++.++++|+.|++++.++++       .
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            589999999999999999999985 899999993 2333333444444445689999999999999999885       3


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCc
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDP  149 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~  149 (305)
                      ++.|||+|+......    ..+.....+...+.++.+|.+..... ..+.||.+||.+...+....              
T Consensus        82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~-~l~~~i~~SSis~~~G~~gq--------------  146 (181)
T PF08659_consen   82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENR-PLDFFILFSSISSLLGGPGQ--------------  146 (181)
T ss_dssp             EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT-TTSEEEEEEEHHHHTT-TTB--------------
T ss_pred             cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcC-CCCeEEEECChhHhccCcch--------------
Confidence            588999999876532    34456677888999999999999887 88999999998876554432              


Q ss_pred             ccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCc
Q 039049          150 DYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSF  188 (305)
Q Consensus       150 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~  188 (305)
                             ..|+.+-...+.+.+.. +..+.+++.+..+.
T Consensus       147 -------~~YaaAN~~lda~a~~~-~~~g~~~~sI~wg~  177 (181)
T PF08659_consen  147 -------SAYAAANAFLDALARQR-RSRGLPAVSINWGA  177 (181)
T ss_dssp             -------HHHHHHHHHHHHHHHHH-HHTTSEEEEEEE-E
T ss_pred             -------HhHHHHHHHHHHHHHHH-HhCCCCEEEEEccc
Confidence                   77999999999887765 45688988887654

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.59  E-value=3.3e-14  Score=117.24  Aligned_cols=196  Identities=16%  Similarity=0.068  Sum_probs=129.7

Q ss_pred             HHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc----CCCEEEEeccccccCCCCch
Q 039049           17 LVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ----GVDGVFHTASPVLVPYDNNI   92 (305)
Q Consensus        17 l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----~~d~Vi~~a~~~~~~~~~~~   92 (305)
                      +++.|+++|++|++++|+.++..             ...++++|+.|.+++.++++    ++|+||||||...    ...
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~-------------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~----~~~   63 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT-------------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPG----TAP   63 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh-------------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCC----CCC
Confidence            47889999999999999865321             13467899999998888876    5899999999753    235


Q ss_pred             hhhhhhhhHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCCCcccCCC----CCCCc------ccccccchhHHH
Q 039049           93 QATLIDPCIKGTLNVLSSCKKA-KSVKRVVLTSSCSSIRYRHDAQQVSPLNES----HWSDP------DYCKHYNLWYAY  161 (305)
Q Consensus        93 ~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~----~~~~~------~~~~~~~~~Y~~  161 (305)
                      +...+++|+.++..+++.+... ...++||++||...++....    .+..|.    .....      ..+......|+.
T Consensus        64 ~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~  139 (241)
T PRK12428         64 VELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQR----LELHKALAATASFDEGAAWLAAHPVALATGYQL  139 (241)
T ss_pred             HHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccc----hHHHHhhhccchHHHHHHhhhccCCCcccHHHH
Confidence            6778999999999999998653 12269999999987653211    111111    00000      000011166999


Q ss_pred             HHHHHHHHHHHHH-H---HcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhh
Q 039049          162 AKTIAEKEAWRIA-K---DCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAM  237 (305)
Q Consensus       162 sK~~~E~~~~~~~-~---~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~  237 (305)
                      ||.+.+.+.+.++ .   ..|+++++++||.+.++..........   ........  .+  ...+...+|+|+++.+++
T Consensus       140 sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~---~~~~~~~~--~~--~~~~~~pe~va~~~~~l~  212 (241)
T PRK12428        140 SKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLG---QERVDSDA--KR--MGRPATADEQAAVLVFLC  212 (241)
T ss_pred             HHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhh---hHhhhhcc--cc--cCCCCCHHHHHHHHHHHc
Confidence            9999999988877 3   358999999999998885322110000   00000000  01  233578999999999988


Q ss_pred             ccc
Q 039049          238 EET  240 (305)
Q Consensus       238 ~~~  240 (305)
                      ...
T Consensus       213 s~~  215 (241)
T PRK12428        213 SDA  215 (241)
T ss_pred             Chh
Confidence            643

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.59  E-value=3.2e-14  Score=117.43  Aligned_cols=211  Identities=17%  Similarity=0.147  Sum_probs=145.5

Q ss_pred             CCc--chHHHHHHHHHHHcCCeEEEEEeCCCccc-chhhhhhccCccCceEEEEccCCCcchHHHHh--------cCCCE
Q 039049            8 GGT--GFIAAHLVKALLDKGHMVRTTVRDPEDLS-KVGFLWELNGAEERLKIMKADLLMEGSFDEAI--------QGVDG   76 (305)
Q Consensus         8 G~~--G~iG~~l~~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~--------~~~d~   76 (305)
                      |++  +.||+++++.|++.|++|++..|+.++.. ....+....    ...++++|+.+++++.+++        .++|+
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~----~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~   76 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEY----GAEVIQCDLSDEESVEALFDEAVERFGGRIDI   76 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHT----TSEEEESCTTSHHHHHHHHHHHHHHHCSSESE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHc----CCceEeecCcchHHHHHHHHHHHhhcCCCeEE
Confidence            566  99999999999999999999999976531 222222211    2346999999998888774        35799


Q ss_pred             EEEecccccc----CC----CCchhhhhhhhhHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           77 VFHTASPVLV----PY----DNNIQATLIDPCIKGTLNVLSSCKKA-KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        77 Vi~~a~~~~~----~~----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      +||+++....    ..    ..+.+...+++|+.+...+++.+... ..-.++|++||.......+..            
T Consensus        77 lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~~------------  144 (241)
T PF13561_consen   77 LVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPGY------------  144 (241)
T ss_dssp             EEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTTT------------
T ss_pred             EEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCccc------------
Confidence            9999998765    11    23567888999999999999887442 122589999987643322211            


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHH----cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKD----CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                               ..|+.+|...+.+.+.++.+    +|+++..+.||.+-.+.... ......+........+      ...+
T Consensus       145 ---------~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~-~~~~~~~~~~~~~~~p------l~r~  208 (241)
T PF13561_consen  145 ---------SAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTER-IPGNEEFLEELKKRIP------LGRL  208 (241)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHH-HHTHHHHHHHHHHHST------TSSH
T ss_pred             ---------hhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhc-cccccchhhhhhhhhc------cCCC
Confidence                     66999999999998888755    47999999999887653110 0001122223332322      3446


Q ss_pred             eeHHHHHHHHHHhhccccc--Cc-eEEEec
Q 039049          224 VHIDDVVGAHILAMEETRA--SG-RLICSS  250 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~~--~~-~~~~~~  250 (305)
                      ...+|+|.++.+++.....  .| .+.+.|
T Consensus       209 ~~~~evA~~v~fL~s~~a~~itG~~i~vDG  238 (241)
T PF13561_consen  209 GTPEEVANAVLFLASDAASYITGQVIPVDG  238 (241)
T ss_dssp             BEHHHHHHHHHHHHSGGGTTGTSEEEEEST
T ss_pred             cCHHHHHHHHHHHhCccccCccCCeEEECC
Confidence            7999999999999986532  34 344543

...

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.56  E-value=5e-14  Score=107.61  Aligned_cols=164  Identities=15%  Similarity=0.150  Sum_probs=121.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      .+||||||+..||..|++.|++.|.+|++.+|+.....+.      ....+.+....+|+.|.++.+++.+       ..
T Consensus         6 nTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~------~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~l   79 (245)
T COG3967           6 NTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEA------KAENPEIHTEVCDVADRDSRRELVEWLKKEYPNL   79 (245)
T ss_pred             cEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHH------HhcCcchheeeecccchhhHHHHHHHHHhhCCch
Confidence            4799999999999999999999999999999998754432      2224578888999999886665543       56


Q ss_pred             CEEEEeccccccCC------CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           75 DGVFHTASPVLVPY------DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        75 d~Vi~~a~~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +++|||||....-.      ..+...+-+.+|+.++.+|..+.-.+   ..-.-+|.+||+-.+-+....          
T Consensus        80 NvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~----------  149 (245)
T COG3967          80 NVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMAST----------  149 (245)
T ss_pred             heeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCccccc----------
Confidence            99999999876432      23334556789999999888776432   133479999998765554321          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHH---HHcCCcEEEEecCceecC
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIA---KDCGIDMVVVNPSFVVGP  192 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~~~~~i~Rp~~v~G~  192 (305)
                                 -.|-.+|.+..-+-..+.   +..+++++-+-|+.|-.+
T Consensus       150 -----------PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         150 -----------PVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             -----------ccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence                       229999998887654443   334789998999988775

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.55  E-value=2.5e-13  Score=110.76  Aligned_cols=209  Identities=18%  Similarity=0.176  Sum_probs=150.6

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CCC
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GVD   75 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d   75 (305)
                      +|+||||+..+|..++..+...|++|+++.|+..+..+.............+.+..+|+.|.+++..+++       .+|
T Consensus        35 hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~d  114 (331)
T KOG1210|consen   35 HILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPID  114 (331)
T ss_pred             eEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCcc
Confidence            6999999999999999999999999999999988777655444443334457899999999998888875       359


Q ss_pred             EEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhcC----CccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           76 GVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKAK----SVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        76 ~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      .+|||||..-+..    +.+..+..+++|..++.++++++..+-    ...+++.+||..+..+-.+.            
T Consensus       115 ~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~Gy------------  182 (331)
T KOG1210|consen  115 NLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGY------------  182 (331)
T ss_pred             eEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccc------------
Confidence            9999999887654    455567788999999999999875431    12389999987765554332            


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHH---HHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccce
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIA---KDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFV  224 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  224 (305)
                               +.|..+|.+...+.....   ..+++.++..-|+.+-.|+...-....+ ..        ...-.+.-+-+
T Consensus       183 ---------saYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP-~~--------t~ii~g~ss~~  244 (331)
T KOG1210|consen  183 ---------SAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKP-EE--------TKIIEGGSSVI  244 (331)
T ss_pred             ---------cccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCc-hh--------eeeecCCCCCc
Confidence                     557777776665544443   3458999999999988886432110000 00        11122244558


Q ss_pred             eHHHHHHHHHHhhcccc
Q 039049          225 HIDDVVGAHILAMEETR  241 (305)
Q Consensus       225 ~v~D~a~~~~~~~~~~~  241 (305)
                      ..+++|.+++.-+.+..
T Consensus       245 ~~e~~a~~~~~~~~rg~  261 (331)
T KOG1210|consen  245 KCEEMAKAIVKGMKRGN  261 (331)
T ss_pred             CHHHHHHHHHhHHhhcC
Confidence            99999999998877643

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.55  E-value=1e-13  Score=107.66  Aligned_cols=213  Identities=21%  Similarity=0.157  Sum_probs=147.9

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      .|++++|||.|.||+.++++|+++|..+.++.-+.+..+....++.... ...+.|+++|+.+..+++++++       .
T Consensus         5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p-~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~   83 (261)
T KOG4169|consen    5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINP-SVSVIFIKCDVTNRGDLEAAFDKILATFGT   83 (261)
T ss_pred             CceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCC-CceEEEEEeccccHHHHHHHHHHHHHHhCc
Confidence            3789999999999999999999999999988887776555555544322 3468899999999888888876       4


Q ss_pred             CCEEEEeccccccCCCCchhhhhhhhhHHHHHH----HHHHHHhcCC--ccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           74 VDGVFHTASPVLVPYDNNIQATLIDPCIKGTLN----VLSSCKKAKS--VKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~----l~~~~~~~~~--~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      +|++||.||...    ..+++..+.+|+.+..+    .+.+..+..|  ..-+|.+||..-..+.+..            
T Consensus        84 iDIlINgAGi~~----dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~------------  147 (261)
T KOG4169|consen   84 IDILINGAGILD----DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVF------------  147 (261)
T ss_pred             eEEEEccccccc----chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccc------------
Confidence            699999999976    45677788888876554    4444444322  2368999997644433221            


Q ss_pred             CcccccccchhHHHHHHHHHHHHHH-----HHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHh-cCCCCCCCC--
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWR-----IAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVK-GLRGEYPNT--  219 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~-----~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--  219 (305)
                               ..|+.||...-.+-++     +-++.|+++..++|+.+-..           ++..... +.-+...+.  
T Consensus       148 ---------pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~-----------l~~~~~~~~~~~e~~~~~~  207 (261)
T KOG4169|consen  148 ---------PVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTD-----------LAENIDASGGYLEYSDSIK  207 (261)
T ss_pred             ---------hhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHH-----------HHHHHHhcCCcccccHHHH
Confidence                     4499998876655444     23566999999999875322           1111111 111111111  


Q ss_pred             ----CccceeHHHHHHHHHHhhcccccCceEEEec
Q 039049          220 ----TVGFVHIDDVVGAHILAMEETRASGRLICSS  250 (305)
Q Consensus       220 ----~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~  250 (305)
                          ...-....+++.-++.++|.+..+..|.++.
T Consensus       208 ~~l~~~~~q~~~~~a~~~v~aiE~~~NGaiw~v~~  242 (261)
T KOG4169|consen  208 EALERAPKQSPACCAINIVNAIEYPKNGAIWKVDS  242 (261)
T ss_pred             HHHHHcccCCHHHHHHHHHHHHhhccCCcEEEEec
Confidence                2335678899999999999987777888853

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.54  E-value=3.7e-13  Score=111.73  Aligned_cols=167  Identities=21%  Similarity=0.188  Sum_probs=122.7

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcc--cchhhhhhccCcc-CceEEEEccCCC-cchHHHHhc----
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDL--SKVGFLWELNGAE-ERLKIMKADLLM-EGSFDEAIQ----   72 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~-~~~~~~~~D~~d-~~~~~~~~~----   72 (305)
                      |++|+||||++.||.++++.|++.|++|+++.|+....  ........  ... ..+.+..+|+.+ .+++..+++    
T Consensus         5 ~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~   82 (251)
T COG1028           5 GKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK--EAGGGRAAAVAADVSDDEESVEALVAAAEE   82 (251)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH--hcCCCcEEEEEecCCCCHHHHHHHHHHHHH
Confidence            47899999999999999999999999999998876531  11111111  111 357788899998 777766654    


Q ss_pred             ---CCCEEEEecccccc-----CCCCchhhhhhhhhHHHHHHHHHHHHhcCCcc--EEEEeccceeeeccCCCCCCcccC
Q 039049           73 ---GVDGVFHTASPVLV-----PYDNNIQATLIDPCIKGTLNVLSSCKKAKSVK--RVVLTSSCSSIRYRHDAQQVSPLN  142 (305)
Q Consensus        73 ---~~d~Vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~v~~SS~~~~~~~~~~~~~~~~~  142 (305)
                         ++|++|||||....     ....+.....+++|+.+...+.+.+...  .+  ++|++||.... ....      . 
T Consensus        83 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~~Iv~isS~~~~-~~~~------~-  152 (251)
T COG1028          83 EFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPL--MKKQRIVNISSVAGL-GGPP------G-  152 (251)
T ss_pred             HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHh--hhhCeEEEECCchhc-CCCC------C-
Confidence               48999999998653     1145678889999999999988854432  23  89999998754 3211      0 


Q ss_pred             CCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecC
Q 039049          143 ESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGP  192 (305)
Q Consensus       143 E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~  192 (305)
                             .      ..|+.||.+.+.+.+.+..+   .|+++..+.|+.+-.+
T Consensus       153 -------~------~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~  192 (251)
T COG1028         153 -------Q------AAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTP  192 (251)
T ss_pred             -------c------chHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCc
Confidence                   1      56999999999988887755   5899999999955433

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.54  E-value=5.4e-13  Score=114.36  Aligned_cols=230  Identities=21%  Similarity=0.191  Sum_probs=139.4

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCc-chHHHHhcC----CC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME-GSFDEAIQG----VD   75 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~~----~d   75 (305)
                      +++|+|+||||.+|+-+++.|+++|+.|++++|+.++..+...   ......+.+.+..|.... +.+..+.+.    ..
T Consensus        79 ~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~---~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~~  155 (411)
T KOG1203|consen   79 PTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG---VFFVDLGLQNVEADVVTAIDILKKLVEAVPKGVV  155 (411)
T ss_pred             CCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc---ccccccccceeeeccccccchhhhhhhhccccce
Confidence            3679999999999999999999999999999999875544322   111223455555554433 333444432    34


Q ss_pred             EEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCccccccc
Q 039049           76 GVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHY  155 (305)
Q Consensus        76 ~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  155 (305)
                      +++-+++.....   .+...-+.+...|++|++++|+.+ |++|||++||.+.--.....    +....     .     
T Consensus       156 ~v~~~~ggrp~~---ed~~~p~~VD~~g~knlvdA~~~a-Gvk~~vlv~si~~~~~~~~~----~~~~~-----~-----  217 (411)
T KOG1203|consen  156 IVIKGAGGRPEE---EDIVTPEKVDYEGTKNLVDACKKA-GVKRVVLVGSIGGTKFNQPP----NILLL-----N-----  217 (411)
T ss_pred             eEEecccCCCCc---ccCCCcceecHHHHHHHHHHHHHh-CCceEEEEEeecCcccCCCc----hhhhh-----h-----
Confidence            555555544322   122334567789999999999999 99999999886532111100    00000     0     


Q ss_pred             chhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCC-CCCCccceeHHHHHHHHH
Q 039049          156 NLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEY-PNTTVGFVHIDDVVGAHI  234 (305)
Q Consensus       156 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~D~a~~~~  234 (305)
                       -.+-.+|+.+|+++    ++.|++++|+||+...-.........        ..+.+..+ .++.--.+.-.|+|+.++
T Consensus       218 -~~~~~~k~~~e~~~----~~Sgl~ytiIR~g~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~r~~vael~~  284 (411)
T KOG1203|consen  218 -GLVLKAKLKAEKFL----QDSGLPYTIIRPGGLEQDTGGQREVV--------VDDEKELLTVDGGAYSISRLDVAELVA  284 (411)
T ss_pred             -hhhhHHHHhHHHHH----HhcCCCcEEEeccccccCCCCcceec--------ccCccccccccccceeeehhhHHHHHH
Confidence             22457888888877    46799999999998765432211100        01111111 111113677889999999


Q ss_pred             HhhcccccCc-e-EEEe----cCCcCHHHHHHHHHH
Q 039049          235 LAMEETRASG-R-LICS----SSVAHWSPIIEMLKA  264 (305)
Q Consensus       235 ~~~~~~~~~~-~-~~~~----~~~~s~~el~~~i~~  264 (305)
                      .++.+..... . ..++    +..-.+.++.+.+..
T Consensus       285 ~all~~~~~~~k~~~~v~~~~gpg~~~~~l~~~~~~  320 (411)
T KOG1203|consen  285 KALLNEAATFKKVVELVLKPEGPGRPYKVLLELFPL  320 (411)
T ss_pred             HHHhhhhhccceeEEeecCCCCCCccHHHHHhhccc
Confidence            9998877644 2 2332    223445555555433

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.53  E-value=3.6e-13  Score=110.06  Aligned_cols=161  Identities=21%  Similarity=0.174  Sum_probs=121.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc---------
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ---------   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---------   72 (305)
                      +-|+|||.....|+.||++|.++|+.|++-.-.++..+......+    .++...++.|++++++++++.+         
T Consensus        30 k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~----s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~  105 (322)
T KOG1610|consen   30 KAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK----SPRLRTLQLDVTKPESVKEAAQWVKKHLGED  105 (322)
T ss_pred             cEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc----CCcceeEeeccCCHHHHHHHHHHHHHhcccc
Confidence            459999999999999999999999999999966654443333221    5588899999999999988764         


Q ss_pred             CCCEEEEeccccccC---C--CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCC
Q 039049           73 GVDGVFHTASPVLVP---Y--DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNE  143 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~---~--~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E  143 (305)
                      +.=.||||||.....   .  ..++....+++|+.|+.++.++.    +++  -.|+|++||...  ..+..        
T Consensus       106 gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~a--rGRvVnvsS~~G--R~~~p--------  173 (322)
T KOG1610|consen  106 GLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRA--RGRVVNVSSVLG--RVALP--------  173 (322)
T ss_pred             cceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhc--cCeEEEeccccc--CccCc--------
Confidence            346899999955432   2  45677889999999988877765    444  259999999763  22110        


Q ss_pred             CCCCCcccccccchhHHHHHHHHHHHHHHHHH---HcCCcEEEEecCce
Q 039049          144 SHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAK---DCGIDMVVVNPSFV  189 (305)
Q Consensus       144 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~i~Rp~~v  189 (305)
                            .     ..+|..||.+.|.+......   .+|+++.++-||.+
T Consensus       174 ------~-----~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f  211 (322)
T KOG1610|consen  174 ------A-----LGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFF  211 (322)
T ss_pred             ------c-----cccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCcc
Confidence                  0     05699999999988665543   46999999999943

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.53  E-value=1.9e-12  Score=109.49  Aligned_cols=210  Identities=13%  Similarity=0.016  Sum_probs=127.4

Q ss_pred             CcEEEeCCc--chHHHHHHHHHHHcCCeEEEEEeCC---------CcccchhhhhhccCccC-----ceEEEEccCCCcc
Q 039049            2 PEYCVTGGT--GFIAAHLVKALLDKGHMVRTTVRDP---------EDLSKVGFLWELNGAEE-----RLKIMKADLLMEG   65 (305)
Q Consensus         2 ~~ilItG~~--G~iG~~l~~~l~~~g~~V~~~~r~~---------~~~~~~~~~~~~~~~~~-----~~~~~~~D~~d~~   65 (305)
                      |+++||||.  ..||+++++.|+++|.+|++..|.+         +.. ........ ....     .+..+.+|+.+.+
T Consensus         9 k~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~-~~~~~~~~-~~g~~~~~~~~~~~~~d~~~~~   86 (299)
T PRK06300          9 KIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELG-KFDASRKL-SNGSLLTFAKIYPMDASFDTPE   86 (299)
T ss_pred             CEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccc-cccccccc-cccchhhhhhHHHhhhhcCCCE
Confidence            679999995  8999999999999999999866431         000 00000000 0000     0111123333322


Q ss_pred             ------------------hHHHHh-------cCCCEEEEecccccc--C----CCCchhhhhhhhhHHHHHHHHHHHHhc
Q 039049           66 ------------------SFDEAI-------QGVDGVFHTASPVLV--P----YDNNIQATLIDPCIKGTLNVLSSCKKA  114 (305)
Q Consensus        66 ------------------~~~~~~-------~~~d~Vi~~a~~~~~--~----~~~~~~~~~~~~n~~~~~~l~~~~~~~  114 (305)
                                        ++.+++       .++|++|||||....  .    ...+.+...+++|+.++.++.+++...
T Consensus        87 ~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~  166 (299)
T PRK06300         87 DVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPI  166 (299)
T ss_pred             EeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                              233333       258999999986421  1    145567888999999999999887653


Q ss_pred             C-CccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc----CCcEEEEecCce
Q 039049          115 K-SVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC----GIDMVVVNPSFV  189 (305)
Q Consensus       115 ~-~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~i~Rp~~v  189 (305)
                      - .-.++|++||.......+..              .      ..|+.+|...+.+.+.++.+.    |+++..+.|+.+
T Consensus       167 m~~~G~ii~iss~~~~~~~p~~--------------~------~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v  226 (299)
T PRK06300        167 MNPGGSTISLTYLASMRAVPGY--------------G------GGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPL  226 (299)
T ss_pred             hhcCCeEEEEeehhhcCcCCCc--------------c------HHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCc
Confidence            1 22478998886543221110              0      259999999999998888652    799999999988


Q ss_pred             ecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhccc
Q 039049          190 VGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       190 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  240 (305)
                      -.+..... ..............    +  ...+...+|++.++.+++...
T Consensus       227 ~T~~~~~~-~~~~~~~~~~~~~~----p--~~r~~~peevA~~v~~L~s~~  270 (299)
T PRK06300        227 ASRAGKAI-GFIERMVDYYQDWA----P--LPEPMEAEQVGAAAAFLVSPL  270 (299)
T ss_pred             cChhhhcc-cccHHHHHHHHhcC----C--CCCCcCHHHHHHHHHHHhCcc
Confidence            76642110 00011111111111    1  123568899999999998753

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.51  E-value=2.9e-13  Score=100.81  Aligned_cols=160  Identities=16%  Similarity=0.143  Sum_probs=119.3

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcC--CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKG--HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      ||+.+|.||||-.|+.+++++++.+  -+|+++.|........         ...+.....|...-+++...+.+.|+.|
T Consensus        18 ~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at---------~k~v~q~~vDf~Kl~~~a~~~qg~dV~F   88 (238)
T KOG4039|consen   18 NMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT---------DKVVAQVEVDFSKLSQLATNEQGPDVLF   88 (238)
T ss_pred             ccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc---------cceeeeEEechHHHHHHHhhhcCCceEE
Confidence            5789999999999999999999988  3899999985322111         2255666678877777888888999999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchh
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLW  158 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  158 (305)
                      .+-|.+....-   .+-++++.-.....+.++|++. ||+.|+.+||.++-...                       +-.
T Consensus        89 caLgTTRgkaG---adgfykvDhDyvl~~A~~AKe~-Gck~fvLvSS~GAd~sS-----------------------rFl  141 (238)
T KOG4039|consen   89 CALGTTRGKAG---ADGFYKVDHDYVLQLAQAAKEK-GCKTFVLVSSAGADPSS-----------------------RFL  141 (238)
T ss_pred             Eeecccccccc---cCceEeechHHHHHHHHHHHhC-CCeEEEEEeccCCCccc-----------------------cee
Confidence            99888765422   3335566666677888888888 99999999997642211                       044


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC
Q 039049          159 YAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPT  199 (305)
Q Consensus       159 Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~  199 (305)
                      |...|-..|+-+..+.   --+++|+|||.+.|........
T Consensus       142 Y~k~KGEvE~~v~eL~---F~~~~i~RPG~ll~~R~esr~g  179 (238)
T KOG4039|consen  142 YMKMKGEVERDVIELD---FKHIIILRPGPLLGERTESRQG  179 (238)
T ss_pred             eeeccchhhhhhhhcc---ccEEEEecCcceeccccccccc
Confidence            8888988888775432   3478899999999987665443

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.50  E-value=1.8e-13  Score=105.07  Aligned_cols=164  Identities=16%  Similarity=0.116  Sum_probs=122.6

Q ss_pred             CcEEEeCCc-chHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--------
Q 039049            2 PEYCVTGGT-GFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--------   72 (305)
Q Consensus         2 ~~ilItG~~-G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--------   72 (305)
                      ++|||||++ |.||.+|++.|.++|+.|++..|+.+....+..       ..++.....|+++++++.....        
T Consensus         8 k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~-------~~gl~~~kLDV~~~~~V~~v~~evr~~~~G   80 (289)
T KOG1209|consen    8 KKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAI-------QFGLKPYKLDVSKPEEVVTVSGEVRANPDG   80 (289)
T ss_pred             CeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHH-------hhCCeeEEeccCChHHHHHHHHHHhhCCCC
Confidence            579999865 889999999999999999999998775443221       1267888999999988776553        


Q ss_pred             CCCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           73 GVDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA--KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      +.|+++|+||......    .....+..+++|+-|..++.++....  +.-..+|+++|..++-+.+..           
T Consensus        81 kld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf~-----------  149 (289)
T KOG1209|consen   81 KLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPFG-----------  149 (289)
T ss_pred             ceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccchh-----------
Confidence            4699999999765432    23345778999999988888776432  122479999999877665443           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHH---HcCCcEEEEecCceecCC
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAK---DCGIDMVVVNPSFVVGPL  193 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~i~Rp~~v~G~~  193 (305)
                                +.|..||++.-.+.+.+.-   -+|++++.+-+|.|-..-
T Consensus       150 ----------~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~I  189 (289)
T KOG1209|consen  150 ----------SIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVATDI  189 (289)
T ss_pred             ----------hhhhHHHHHHHHhhhhcEEeeeccccEEEEecccceeccc
Confidence                      6799999998877655432   347888888888765543

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.50  E-value=5.6e-13  Score=137.74  Aligned_cols=170  Identities=18%  Similarity=0.139  Sum_probs=130.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHc-CCeEEEEEeCCCccc--c--------------------------------------
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDK-GHMVRTTVRDPEDLS--K--------------------------------------   40 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~-g~~V~~~~r~~~~~~--~--------------------------------------   40 (305)
                      +.+|||||++.||.+++++|+++ |.+|++++|++....  .                                      
T Consensus      1998 ~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~~~ 2077 (2582)
T TIGR02813      1998 DVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRPVL 2077 (2582)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccccc
Confidence            57999999999999999999998 599999999831000  0                                      


Q ss_pred             -----hhhhhhccCccCceEEEEccCCCcchHHHHhc------CCCEEEEeccccccCC----CCchhhhhhhhhHHHHH
Q 039049           41 -----VGFLWELNGAEERLKIMKADLLMEGSFDEAIQ------GVDGVFHTASPVLVPY----DNNIQATLIDPCIKGTL  105 (305)
Q Consensus        41 -----~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------~~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~  105 (305)
                           ...+..+...+.++.++.+|++|.+++.++++      ++|.|||+||......    ..+.+...+++|+.|+.
T Consensus      2078 ~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~ 2157 (2582)
T TIGR02813      2078 SSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLL 2157 (2582)
T ss_pred             hhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHH
Confidence                 00011112224468899999999998887775      4799999999865432    45677889999999999


Q ss_pred             HHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc-CCcEEEE
Q 039049          106 NVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC-GIDMVVV  184 (305)
Q Consensus       106 ~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~i~  184 (305)
                      ++++++... ..++||++||...+.+....                     ..|+.+|...+.+.+.+..++ +++++.+
T Consensus      2158 ~Ll~al~~~-~~~~IV~~SSvag~~G~~gq---------------------s~YaaAkaaL~~la~~la~~~~~irV~sI 2215 (2582)
T TIGR02813      2158 SLLAALNAE-NIKLLALFSSAAGFYGNTGQ---------------------SDYAMSNDILNKAALQLKALNPSAKVMSF 2215 (2582)
T ss_pred             HHHHHHHHh-CCCeEEEEechhhcCCCCCc---------------------HHHHHHHHHHHHHHHHHHHHcCCcEEEEE
Confidence            999998876 66789999998765543321                     569999999998888777665 6899999


Q ss_pred             ecCceecCC
Q 039049          185 NPSFVVGPL  193 (305)
Q Consensus       185 Rp~~v~G~~  193 (305)
                      .||.+-|..
T Consensus      2216 ~wG~wdtgm 2224 (2582)
T TIGR02813      2216 NWGPWDGGM 2224 (2582)
T ss_pred             ECCeecCCc
Confidence            999876653

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.49  E-value=5.1e-14  Score=104.61  Aligned_cols=207  Identities=18%  Similarity=0.163  Sum_probs=147.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc---CCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ---GVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~Vi   78 (305)
                      +.|++||+.-.||+.+++.|++.|.+|+++.|++.+....-..   .  ..-+..+++|+.+-+.+.+++.   .+|..+
T Consensus         8 ~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e---~--p~~I~Pi~~Dls~wea~~~~l~~v~pidgLV   82 (245)
T KOG1207|consen    8 VIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKE---T--PSLIIPIVGDLSAWEALFKLLVPVFPIDGLV   82 (245)
T ss_pred             eEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhh---C--CcceeeeEecccHHHHHHHhhcccCchhhhh
Confidence            4689999988999999999999999999999988754432221   1  1238899999999888888775   469999


Q ss_pred             EeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCc-cEEEEeccceeeeccCCCCCCcccCCCCCCCcc
Q 039049           79 HTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSV-KRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPD  150 (305)
Q Consensus        79 ~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~-~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~  150 (305)
                      |+||......    .++..+..|++|+.+..++.+...+.   .++ ..+|.+||.+....         ++-.      
T Consensus        83 NNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~---------~~nH------  147 (245)
T KOG1207|consen   83 NNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRP---------LDNH------  147 (245)
T ss_pred             ccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccc---------cCCc------
Confidence            9999765432    35566778999999998888874332   021 25999999775332         2211      


Q ss_pred             cccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHH
Q 039049          151 YCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHID  227 (305)
Q Consensus       151 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  227 (305)
                            +.|-.+|.+.+.+-+.++-+.   .+++..+.|..+........-+. +..-..++...+      ..-|.-++
T Consensus       148 ------tvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSD-P~K~k~mL~riP------l~rFaEV~  214 (245)
T KOG1207|consen  148 ------TVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSD-PDKKKKMLDRIP------LKRFAEVD  214 (245)
T ss_pred             ------eEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCC-chhccchhhhCc------hhhhhHHH
Confidence                  669999999999988888775   48899999999987643221111 111112222211      45689999


Q ss_pred             HHHHHHHHhhcccc
Q 039049          228 DVVGAHILAMEETR  241 (305)
Q Consensus       228 D~a~~~~~~~~~~~  241 (305)
                      .++.++.+++....
T Consensus       215 eVVnA~lfLLSd~s  228 (245)
T KOG1207|consen  215 EVVNAVLFLLSDNS  228 (245)
T ss_pred             HHHhhheeeeecCc
Confidence            99999999987644

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.49  E-value=1.2e-12  Score=101.74  Aligned_cols=193  Identities=20%  Similarity=0.221  Sum_probs=132.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHc-CCeEEEEE-eCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDK-GHMVRTTV-RDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~-g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      ++|+||||+..||.-|+++|++. |.++++.. |+++..  ...+.......+++++++.|+...+++.+..+       
T Consensus         4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a--~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg   81 (249)
T KOG1611|consen    4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKA--ATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVG   81 (249)
T ss_pred             ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHh--hHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcc
Confidence            67999999999999999999975 55555544 556653  22222233335699999999998877776553       


Q ss_pred             --CCCEEEEeccccccCC-----CCchhhhhhhhhHHHHHHHHHHH----HhcCCcc-----------EEEEeccceeee
Q 039049           73 --GVDGVFHTASPVLVPY-----DNNIQATLIDPCIKGTLNVLSSC----KKAKSVK-----------RVVLTSSCSSIR  130 (305)
Q Consensus        73 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~-----------~~v~~SS~~~~~  130 (305)
                        +.+++|||||......     ....+...+++|+.++..+.+.+    +++ ..+           .+|++||...--
T Consensus        82 ~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkka-as~~~gd~~s~~raaIinisS~~~s~  160 (249)
T KOG1611|consen   82 SDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKA-ASKVSGDGLSVSRAAIINISSSAGSI  160 (249)
T ss_pred             cCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHH-hhcccCCcccccceeEEEeecccccc
Confidence              5699999999876532     33446788999999988877664    222 222           689898865321


Q ss_pred             ccCCCCCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHH
Q 039049          131 YRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILA  207 (305)
Q Consensus       131 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~  207 (305)
                      +.            ..+.+.      ..|..||.+.-.+.+..+-+.   ++-++.+.||+|-.....            
T Consensus       161 ~~------------~~~~~~------~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg------------  210 (249)
T KOG1611|consen  161 GG------------FRPGGL------SAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGG------------  210 (249)
T ss_pred             CC------------CCCcch------hhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCC------------
Confidence            11            111111      679999999999988887553   677788899988655322            


Q ss_pred             HHhcCCCCCCCCCccceeHHHHHHHHHHhhcc
Q 039049          208 MVKGLRGEYPNTTVGFVHIDDVVGAHILAMEE  239 (305)
Q Consensus       208 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  239 (305)
                                  .-..+.+++-+.-++..+.+
T Consensus       211 ------------~~a~ltveeSts~l~~~i~k  230 (249)
T KOG1611|consen  211 ------------KKAALTVEESTSKLLASINK  230 (249)
T ss_pred             ------------CCcccchhhhHHHHHHHHHh
Confidence                        12246677777777766654

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.40  E-value=5.7e-12  Score=103.07  Aligned_cols=170  Identities=17%  Similarity=0.104  Sum_probs=123.0

Q ss_pred             EEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcch----HHHHhc--CCCEE
Q 039049            4 YCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGS----FDEAIQ--GVDGV   77 (305)
Q Consensus         4 ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~----~~~~~~--~~d~V   77 (305)
                      .+|||||..||++.+++|+++|.+|++++|+.+++..........+ .-.+.++..|+.+.+.    +.+.+.  ++.++
T Consensus        52 AVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~-~vev~~i~~Dft~~~~~ye~i~~~l~~~~VgIL  130 (312)
T KOG1014|consen   52 AVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKY-KVEVRIIAIDFTKGDEVYEKLLEKLAGLDVGIL  130 (312)
T ss_pred             EEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHh-CcEEEEEEEecCCCchhHHHHHHHhcCCceEEE
Confidence            6899999999999999999999999999999987665443322222 2467888899987664    444444  46789


Q ss_pred             EEeccccccCC------CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCCCC
Q 039049           78 FHTASPVLVPY------DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSD  148 (305)
Q Consensus        78 i~~a~~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~  148 (305)
                      |||+|......      ..+.....+.+|+.++..+.+.....   ++-.-+|++||.+..-+.+..             
T Consensus       131 VNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~-------------  197 (312)
T KOG1014|consen  131 VNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLL-------------  197 (312)
T ss_pred             EecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhH-------------
Confidence            99999987321      12234567888988877776654322   144579999997643332221             


Q ss_pred             cccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCC
Q 039049          149 PDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLA  195 (305)
Q Consensus       149 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~  195 (305)
                              +.|+.+|...+.+-....+++   |+.+-.+-|..|-++...
T Consensus       198 --------s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~  239 (312)
T KOG1014|consen  198 --------SVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAK  239 (312)
T ss_pred             --------HHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccccc
Confidence                    679999999888877776664   788888999998887543

>PTZ00325 malate dehydrogenase; Provisional

Probab=99.29  E-value=5.5e-11  Score=100.75  Aligned_cols=177  Identities=16%  Similarity=0.061  Sum_probs=122.7

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcC--CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKG--HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      |+||+|+|++|.||+.++..|+.++  .++.+++++....... .+.   +...  .....+..|+.++.+.++++|+||
T Consensus         8 ~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~-Dl~---~~~~--~~~v~~~td~~~~~~~l~gaDvVV   81 (321)
T PTZ00325          8 MFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAA-DLS---HIDT--PAKVTGYADGELWEKALRGADLVL   81 (321)
T ss_pred             CCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCccccc-chh---hcCc--CceEEEecCCCchHHHhCCCCEEE
Confidence            7899999999999999999998665  6899998833221111 111   1111  223345556555677889999999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchh
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLW  158 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  158 (305)
                      ++||.....  .....+.+..|+..+.+++++++++ +++++|+++|..+..-.....  ..+.+.....|.      ..
T Consensus        82 itaG~~~~~--~~tR~dll~~N~~i~~~i~~~i~~~-~~~~iviv~SNPvdv~~~~~~--~~~~~~sg~p~~------~v  150 (321)
T PTZ00325         82 ICAGVPRKP--GMTRDDLFNTNAPIVRDLVAAVASS-APKAIVGIVSNPVNSTVPIAA--ETLKKAGVYDPR------KL  150 (321)
T ss_pred             ECCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecCcHHHHHHHHH--hhhhhccCCChh------he
Confidence            999986532  2345668999999999999999999 999999999976533221100  011233333333      66


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCC
Q 039049          159 YAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLA  195 (305)
Q Consensus       159 Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~  195 (305)
                      ||.+-+..-++-...++..++....++ +.|+|....
T Consensus       151 iG~g~LDs~R~r~~la~~l~v~~~~V~-~~VlGeHGd  186 (321)
T PTZ00325        151 FGVTTLDVVRARKFVAEALGMNPYDVN-VPVVGGHSG  186 (321)
T ss_pred             eechhHHHHHHHHHHHHHhCcChhheE-EEEEeecCC
Confidence            888766666766677777898888888 888887654

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.20  E-value=1.3e-10  Score=90.34  Aligned_cols=103  Identities=19%  Similarity=0.205  Sum_probs=76.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+||+|. +++.|++.|++|++++|++++......  ..+ ...++.++++|+.|.+++.++++       .+
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~--~l~-~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~i   76 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKR--EST-TPESITPLPLDYHDDDALKLAIKSTIEKNGPF   76 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHH--Hhh-cCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999998876 999999999999999997653322111  111 13468889999999998888775       34


Q ss_pred             CEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCcc----EEEEeccce
Q 039049           75 DGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVK----RVVLTSSCS  127 (305)
Q Consensus        75 d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~v~~SS~~  127 (305)
                      |.+|+.+-.                  .++.++.++|++. +++    +|+|+=++.
T Consensus        77 d~lv~~vh~------------------~~~~~~~~~~~~~-gv~~~~~~~~h~~gs~  114 (177)
T PRK08309         77 DLAVAWIHS------------------SAKDALSVVCREL-DGSSETYRLFHVLGSA  114 (177)
T ss_pred             eEEEEeccc------------------cchhhHHHHHHHH-ccCCCCceEEEEeCCc
Confidence            666655433                  3477899999999 888    898876544

>PRK06720 hypothetical protein; Provisional

Probab=99.18  E-value=3.5e-10  Score=87.48  Aligned_cols=125  Identities=16%  Similarity=0.109  Sum_probs=80.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccch-hhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKV-GFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      +.++||||+|.||+++++.|++.|++|++..|+.+..... ..+.   .....+.++.+|+.+.+++.++++       +
T Consensus        17 k~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~---~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~   93 (169)
T PRK06720         17 KVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEIT---NLGGEALFVSYDMEKQGDWQRVISITLNAFSR   93 (169)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH---hcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5799999999999999999999999999999876533221 1111   112356778999999888777542       5


Q ss_pred             CCEEEEeccccccCC--CCchhhhhhhhhHHHHHHHHHHHH----hc------CCccEEEEeccceee
Q 039049           74 VDGVFHTASPVLVPY--DNNIQATLIDPCIKGTLNVLSSCK----KA------KSVKRVVLTSSCSSI  129 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~----~~------~~~~~~v~~SS~~~~  129 (305)
                      +|++|||||......  +..........|+.++......+.    +.      ++..||..+||.++-
T Consensus        94 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (169)
T PRK06720         94 IDMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQS  161 (169)
T ss_pred             CCEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccccc
Confidence            899999999766432  111111122334443333333322    11      245688888887653

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.18  E-value=6.4e-11  Score=88.12  Aligned_cols=208  Identities=19%  Similarity=0.169  Sum_probs=142.2

Q ss_pred             EEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CCCE
Q 039049            4 YCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GVDG   76 (305)
Q Consensus         4 ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~   76 (305)
                      .+||||...+|+..++.|++.|..|..++...++-.....     ..+.++.+..+|++.++++..++.       ..|+
T Consensus        12 alvtggasglg~ataerlakqgasv~lldlp~skg~~vak-----elg~~~vf~padvtsekdv~aala~ak~kfgrld~   86 (260)
T KOG1199|consen   12 ALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAK-----ELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA   86 (260)
T ss_pred             EEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHH-----HhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence            6899999999999999999999999999876654332211     125588999999999988887764       4699


Q ss_pred             EEEeccccccCC----------CCchhhhhhhhhHHHHHHHHHHHHhc---------CCccEEEEeccceeeeccCCCCC
Q 039049           77 VFHTASPVLVPY----------DNNIQATLIDPCIKGTLNVLSSCKKA---------KSVKRVVLTSSCSSIRYRHDAQQ  137 (305)
Q Consensus        77 Vi~~a~~~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~~v~~SS~~~~~~~~~~~~  137 (305)
                      .+||||......          ..++....+++|+.|+.|+++.....         ++-..+|..-|..++.+....  
T Consensus        87 ~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~gq--  164 (260)
T KOG1199|consen   87 LVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTGQ--  164 (260)
T ss_pred             eeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccch--
Confidence            999999764321          24456778899999999999765321         122246777777766554331  


Q ss_pred             CcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCC
Q 039049          138 VSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRG  214 (305)
Q Consensus       138 ~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  214 (305)
                                         ..|..||...--+-.-.+++   .|++++.+-|+.+-.|...    ..+..+...+.. .+
T Consensus       165 -------------------aaysaskgaivgmtlpiardla~~gir~~tiapglf~tplls----slpekv~~fla~-~i  220 (260)
T KOG1199|consen  165 -------------------AAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLS----SLPEKVKSFLAQ-LI  220 (260)
T ss_pred             -------------------hhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhh----hhhHHHHHHHHH-hC
Confidence                               66888887765443333333   3899999999877655432    223333333322 12


Q ss_pred             CCCCCCccceeHHHHHHHHHHhhcccccCce
Q 039049          215 EYPNTTVGFVHIDDVVGAHILAMEETRASGR  245 (305)
Q Consensus       215 ~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~  245 (305)
                      .+|   ...-|..+.+..+..+++++--++.
T Consensus       221 pfp---srlg~p~eyahlvqaiienp~lnge  248 (260)
T KOG1199|consen  221 PFP---SRLGHPHEYAHLVQAIIENPYLNGE  248 (260)
T ss_pred             CCc---hhcCChHHHHHHHHHHHhCcccCCe
Confidence            222   2346778888889999999876554

>PLN00106 malate dehydrogenase

Probab=99.16  E-value=5.3e-10  Score=94.90  Aligned_cols=174  Identities=16%  Similarity=0.046  Sum_probs=121.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC--CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG--HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~   79 (305)
                      .||+|||++|.||++++..|+..+  .++.++++++..... ..+.   +...  .....++.+.+++.+.++++|+|||
T Consensus        19 ~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a-~Dl~---~~~~--~~~i~~~~~~~d~~~~l~~aDiVVi   92 (323)
T PLN00106         19 FKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVA-ADVS---HINT--PAQVRGFLGDDQLGDALKGADLVII   92 (323)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeE-chhh---hCCc--CceEEEEeCCCCHHHHcCCCCEEEE
Confidence            479999999999999999998766  489999887622111 1111   1111  1123344445567888999999999


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhH
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWY  159 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y  159 (305)
                      +||....+  .....+.+..|...++++++.++++ +...+|+++|--+-...+..  ...+.......|.      ..|
T Consensus        93 tAG~~~~~--g~~R~dll~~N~~i~~~i~~~i~~~-~p~aivivvSNPvD~~~~i~--t~~~~~~s~~p~~------~vi  161 (323)
T PLN00106         93 PAGVPRKP--GMTRDDLFNINAGIVKTLCEAVAKH-CPNALVNIISNPVNSTVPIA--AEVLKKAGVYDPK------KLF  161 (323)
T ss_pred             eCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEeCCCccccHHHH--HHHHHHcCCCCcc------eEE
Confidence            99986543  2346778999999999999999999 88899999886553110000  0112233333333      668


Q ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEecCceecCC
Q 039049          160 AYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPL  193 (305)
Q Consensus       160 ~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~  193 (305)
                      |.+++..+++-..+++..+++...+. +.|+|..
T Consensus       162 G~~~LDs~Rl~~~lA~~lgv~~~~V~-~~ViGeH  194 (323)
T PLN00106        162 GVTTLDVVRANTFVAEKKGLDPADVD-VPVVGGH  194 (323)
T ss_pred             EEecchHHHHHHHHHHHhCCChhheE-EEEEEeC
Confidence            99999999999999999999988884 4555654

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.12  E-value=4e-10  Score=87.95  Aligned_cols=206  Identities=13%  Similarity=0.023  Sum_probs=132.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      +-|||||++..||..++..+.+.+.+.....+.....+ ...+....  .+......+|+.....+..+.+       +.
T Consensus         7 ~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~-~~~L~v~~--gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr   83 (253)
T KOG1204|consen    7 KVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE-LEGLKVAY--GDDFVHVVGDITEEQLLGALREAPRKKGGKR   83 (253)
T ss_pred             eEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc-ccceEEEe--cCCcceechHHHHHHHHHHHHhhhhhcCCce
Confidence            34899999999999999999988876555544432221 11111111  1233344455554443444332       46


Q ss_pred             CEEEEeccccccCC-------CCchhhhhhhhhHHHHHHHHHHHHhc-CC---ccEEEEeccceeeeccCCCCCCcccCC
Q 039049           75 DGVFHTASPVLVPY-------DNNIQATLIDPCIKGTLNVLSSCKKA-KS---VKRVVLTSSCSSIRYRHDAQQVSPLNE  143 (305)
Q Consensus        75 d~Vi~~a~~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~---~~~~v~~SS~~~~~~~~~~~~~~~~~E  143 (305)
                      |.||||||...+-.       ..+.+..+++.|+.....|..++... ++   .+.+|++||.....+....        
T Consensus        84 ~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~w--------  155 (253)
T KOG1204|consen   84 DIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSW--------  155 (253)
T ss_pred             eEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHH--------
Confidence            99999999876532       35567889999999988888776432 22   3679999998765443221        


Q ss_pred             CCCCCcccccccchhHHHHHHHHHHHHHHHH-HHc-CCcEEEEecCceecCCCCCCC------CchHHHHHHHHhcCCCC
Q 039049          144 SHWSDPDYCKHYNLWYAYAKTIAEKEAWRIA-KDC-GIDMVVVNPSFVVGPLLAPQP------TSTLLLILAMVKGLRGE  215 (305)
Q Consensus       144 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~-~~~~~i~Rp~~v~G~~~~~~~------~~~~~~~~~~~~~~~~~  215 (305)
                                   ..|..+|++-+.+.+.++ +++ ++.+..++||.+-.+.+....      +....++......    
T Consensus       156 -------------a~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~----  218 (253)
T KOG1204|consen  156 -------------AAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKES----  218 (253)
T ss_pred             -------------HHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhc----
Confidence                         569999999999988776 444 899999999998766432111      1112222332222    


Q ss_pred             CCCCCccceeHHHHHHHHHHhhccc
Q 039049          216 YPNTTVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       216 ~~~~~~~~i~v~D~a~~~~~~~~~~  240 (305)
                           -..+...+.++.+..++++.
T Consensus       219 -----~~ll~~~~~a~~l~~L~e~~  238 (253)
T KOG1204|consen  219 -----GQLLDPQVTAKVLAKLLEKG  238 (253)
T ss_pred             -----CCcCChhhHHHHHHHHHHhc
Confidence                 23567778888888888775

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=99.11  E-value=3.4e-10  Score=97.25  Aligned_cols=97  Identities=24%  Similarity=0.338  Sum_probs=78.5

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcC-CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKG-HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFH   79 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~   79 (305)
                      ||+|+|+|+ |+||+.++..|+++| .+|++.+|+.++..+....     ..++++.++.|+.|.+.+.+++++.|+|||
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~-----~~~~v~~~~vD~~d~~al~~li~~~d~VIn   74 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAEL-----IGGKVEALQVDAADVDALVALIKDFDLVIN   74 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhh-----ccccceeEEecccChHHHHHHHhcCCEEEE
Confidence            899999998 999999999999999 8999999997755443221     123789999999999999999999999999


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEe
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLT  123 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  123 (305)
                      ++....                  ..+++++|.+. |+ .+|=+
T Consensus        75 ~~p~~~------------------~~~i~ka~i~~-gv-~yvDt   98 (389)
T COG1748          75 AAPPFV------------------DLTILKACIKT-GV-DYVDT   98 (389)
T ss_pred             eCCchh------------------hHHHHHHHHHh-CC-CEEEc
Confidence            998754                  34677788777 64 34433

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=98.89  E-value=2.1e-08  Score=79.59  Aligned_cols=179  Identities=16%  Similarity=0.154  Sum_probs=119.9

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCC-----eEEEEEeCCCcccchhh-hhh-ccCccCceEEEEccCCCcchHHHHh----
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGH-----MVRTTVRDPEDLSKVGF-LWE-LNGAEERLKIMKADLLMEGSFDEAI----   71 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~-----~V~~~~r~~~~~~~~~~-~~~-~~~~~~~~~~~~~D~~d~~~~~~~~----   71 (305)
                      -++|||+++.+|.++|.+|++...     .+.+..|+.++.+..-. +.. .+...-++++++.|+++..++.++.    
T Consensus         5 valITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~di~   84 (341)
T KOG1478|consen    5 VALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKDIK   84 (341)
T ss_pred             EEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHHHH
Confidence            489999999999999999998653     46667788776654322 222 2323447899999999876665554    


Q ss_pred             ---cCCCEEEEeccccccC-------------------------------CCCchhhhhhhhhHHHHHHHHHHHHhc---
Q 039049           72 ---QGVDGVFHTASPVLVP-------------------------------YDNNIQATLIDPCIKGTLNVLSSCKKA---  114 (305)
Q Consensus        72 ---~~~d~Vi~~a~~~~~~-------------------------------~~~~~~~~~~~~n~~~~~~l~~~~~~~---  114 (305)
                         +..|.|+-+||.+..+                               .+.+.-...++.||-|..-++..+...   
T Consensus        85 ~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll~~  164 (341)
T KOG1478|consen   85 QRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLLCH  164 (341)
T ss_pred             HHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHhhc
Confidence               3679999999987543                               134556778999999998888776432   


Q ss_pred             CCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceec
Q 039049          115 KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVG  191 (305)
Q Consensus       115 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G  191 (305)
                      +..+.+|++||..+-..        .++=++....    ....+|..||++.+-+-....+.   .|+..-++.||....
T Consensus       165 ~~~~~lvwtSS~~a~kk--------~lsleD~q~~----kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt  232 (341)
T KOG1478|consen  165 SDNPQLVWTSSRMARKK--------NLSLEDFQHS----KGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTT  232 (341)
T ss_pred             CCCCeEEEEeecccccc--------cCCHHHHhhh----cCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeec
Confidence            24458999999764221        1111111110    11156999999998765554433   267777888887665


Q ss_pred             CC
Q 039049          192 PL  193 (305)
Q Consensus       192 ~~  193 (305)
                      ..
T Consensus       233 ~~  234 (341)
T KOG1478|consen  233 NS  234 (341)
T ss_pred             ch
Confidence            44

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.87  E-value=2.6e-08  Score=85.19  Aligned_cols=176  Identities=15%  Similarity=0.059  Sum_probs=102.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC-------CeEEEEEeCCCcc-cchhhhhhccCccCceEEEEccCCCcchHHHHhcC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG-------HMVRTTVRDPEDL-SKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQG   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g-------~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~   73 (305)
                      .||+||||+|++|++++..|+..+       .+|+++++++... .....+ .+.+   -......|+....++.+.+++
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~-Dl~d---~~~~~~~~~~~~~~~~~~l~~   78 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVM-ELQD---CAFPLLKSVVATTDPEEAFKD   78 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceee-ehhh---ccccccCCceecCCHHHHhCC
Confidence            379999999999999999998844       5899999865321 010000 0000   000222355445667788899


Q ss_pred             CCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCC-ccEEEEeccceeeeccCCCCCCcccCCCCCCCcccc
Q 039049           74 VDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKS-VKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYC  152 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~  152 (305)
                      +|+|||+||.....  .....+.++.|+...+.+.+.++++.. -..+|.+|...-...       ..+.+.....|.. 
T Consensus        79 aDiVI~tAG~~~~~--~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t-------~~~~k~~~~~~~~-  148 (325)
T cd01336          79 VDVAILVGAMPRKE--GMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPANTNA-------LILLKYAPSIPKE-  148 (325)
T ss_pred             CCEEEEeCCcCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcHHHHH-------HHHHHHcCCCCHH-
Confidence            99999999987543  234466899999999999988888721 223555553110000       1122221111110 


Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCC
Q 039049          153 KHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLA  195 (305)
Q Consensus       153 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~  195 (305)
                          ..=+.+.+..-++-...++..+++...++-..|+|....
T Consensus       149 ----~ig~gt~LDs~R~r~~la~~l~v~~~~v~~~~V~GeHG~  187 (325)
T cd01336         149 ----NFTALTRLDHNRAKSQIALKLGVPVSDVKNVIIWGNHSS  187 (325)
T ss_pred             ----HEEeeehHHHHHHHHHHHHHhCcChhhceEeEEEEcCCC
Confidence                101112233334444445666888777777777786543

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=98.78  E-value=7.3e-08  Score=82.21  Aligned_cols=171  Identities=15%  Similarity=0.052  Sum_probs=111.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-------eEEEEEeCCCc--cc-chhhhhhcc-CccCceEEEEccCCCcchHHHH
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-------MVRTTVRDPED--LS-KVGFLWELN-GAEERLKIMKADLLMEGSFDEA   70 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-------~V~~~~r~~~~--~~-~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~   70 (305)
                      +||.|+|++|.+|.+++..|+..|.       ++.++++....  .. ....+.... ....++.+.       ....+.
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~-------~~~~~~   75 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT-------DDPNVA   75 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe-------cCcHHH
Confidence            4899999999999999999998774       78888875432  11 111111110 000122211       112355


Q ss_pred             hcCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCC-ccEEEEeccceeeeccCCCCCCcccCCCCC-CC
Q 039049           71 IQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKS-VKRVVLTSSCSSIRYRHDAQQVSPLNESHW-SD  148 (305)
Q Consensus        71 ~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~-~~  148 (305)
                      ++++|+||.+||....+  .....+.+..|+...+.+...++++.. -..+|.+|-..-...       ....+... ..
T Consensus        76 ~~daDivvitaG~~~k~--g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t-------~~~~k~sg~~p  146 (322)
T cd01338          76 FKDADWALLVGAKPRGP--GMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNA-------LIAMKNAPDIP  146 (322)
T ss_pred             hCCCCEEEEeCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHH-------HHHHHHcCCCC
Confidence            77999999999986533  334566899999999999999988731 234555552110000       01111111 11


Q ss_pred             cccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCC
Q 039049          149 PDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLL  194 (305)
Q Consensus       149 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~  194 (305)
                      +.      ..||.+++..+++...+++..+++...+|..+|||+..
T Consensus       147 ~~------~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG  186 (322)
T cd01338         147 PD------NFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHS  186 (322)
T ss_pred             hH------heEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCc
Confidence            12      66999999999999999999999999999999999974

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.76  E-value=7.1e-08  Score=79.28  Aligned_cols=96  Identities=19%  Similarity=0.227  Sum_probs=72.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi~   79 (305)
                      |+|||+||||. |+.|++.|.+.|++|++.+++.........        .+...+..+..|.+++.+.+.  ++|+||+
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~--------~g~~~v~~g~l~~~~l~~~l~~~~i~~VID   71 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI--------HQALTVHTGALDPQELREFLKRHSIDILVD   71 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc--------cCCceEEECCCCHHHHHHHHHhcCCCEEEE
Confidence            57999999999 999999999999999999998764332211        123445566778888888875  6999999


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEE
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVL  122 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~  122 (305)
                      ++.+..               ...+.|+.++|++. +++.+=|
T Consensus        72 AtHPfA---------------~~is~~a~~a~~~~-~ipylR~   98 (256)
T TIGR00715        72 ATHPFA---------------AQITTNATAVCKEL-GIPYVRF   98 (256)
T ss_pred             cCCHHH---------------HHHHHHHHHHHHHh-CCcEEEE
Confidence            976643               23477889999998 8775544

This enzyme was found to be a monomer by gel filtration.

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=98.75  E-value=5.3e-07  Score=77.51  Aligned_cols=83  Identities=14%  Similarity=0.067  Sum_probs=59.7

Q ss_pred             CcEEEeCCcchHHHH--HHHHHHHcCCeEEEEEeCCCcccc---------hhhhhh-ccCccCceEEEEccCCCcchHHH
Q 039049            2 PEYCVTGGTGFIAAH--LVKALLDKGHMVRTTVRDPEDLSK---------VGFLWE-LNGAEERLKIMKADLLMEGSFDE   69 (305)
Q Consensus         2 ~~ilItG~~G~iG~~--l~~~l~~~g~~V~~~~r~~~~~~~---------~~~~~~-~~~~~~~~~~~~~D~~d~~~~~~   69 (305)
                      |++|||||++.+|.+  +++.| +.|.+|+++++..+....         ...+.. ....+..+..+.+|+.+.+.+.+
T Consensus        42 K~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~~  120 (398)
T PRK13656         42 KKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQK  120 (398)
T ss_pred             CEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence            789999999999999  89999 999999999864322110         011111 11112346678999999888777


Q ss_pred             Hhc-------CCCEEEEeccccc
Q 039049           70 AIQ-------GVDGVFHTASPVL   85 (305)
Q Consensus        70 ~~~-------~~d~Vi~~a~~~~   85 (305)
                      +++       ++|++||++|...
T Consensus       121 lie~I~e~~G~IDiLVnSaA~~~  143 (398)
T PRK13656        121 VIELIKQDLGQVDLVVYSLASPR  143 (398)
T ss_pred             HHHHHHHhcCCCCEEEECCccCC
Confidence            664       5899999999874

>PRK05086 malate dehydrogenase; Provisional

Probab=98.72  E-value=2.4e-07  Score=78.87  Aligned_cols=170  Identities=15%  Similarity=0.040  Sum_probs=103.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHH---cCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLD---KGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      |||+|+||+|.+|++++..|..   .++++.++.|++......-.+   .+. +....+.+  .+.+++.+.++++|+||
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl---~~~-~~~~~i~~--~~~~d~~~~l~~~DiVI   74 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDL---SHI-PTAVKIKG--FSGEDPTPALEGADVVL   74 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhh---hcC-CCCceEEE--eCCCCHHHHcCCCCEEE
Confidence            6899999999999999998855   246788888864321100111   110 11122333  22345567778999999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEecccee----eeccCCCCCCcccCCCCCCCcccccc
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSS----IRYRHDAQQVSPLNESHWSDPDYCKH  154 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~----~~~~~~~~~~~~~~E~~~~~~~~~~~  154 (305)
                      .++|.....  .....+.+..|......+++.++++ +.+++|.+.|--+    +.-..     ........+..     
T Consensus        75 itaG~~~~~--~~~R~dll~~N~~i~~~ii~~i~~~-~~~~ivivvsNP~D~~t~~~~~-----~~~~~sg~p~~-----  141 (312)
T PRK05086         75 ISAGVARKP--GMDRSDLFNVNAGIVKNLVEKVAKT-CPKACIGIITNPVNTTVAIAAE-----VLKKAGVYDKN-----  141 (312)
T ss_pred             EcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEccCchHHHHHHHHH-----HHHHhcCCCHH-----
Confidence            999986543  2345668999999999999999999 8888888887433    11000     00011111100     


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCC
Q 039049          155 YNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPL  193 (305)
Q Consensus       155 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~  193 (305)
                        ...|..-...-++....++..+++..-++ +.++|..
T Consensus       142 --rvig~~~Lds~R~~~~ia~~l~~~~~~v~-~~v~GeH  177 (312)
T PRK05086        142 --KLFGVTTLDVIRSETFVAELKGKQPGEVE-VPVIGGH  177 (312)
T ss_pred             --HEEeeecHHHHHHHHHHHHHhCCChhheE-EEEEEec
Confidence              11222223333444455566788877777 7778876

>PRK09620 hypothetical protein; Provisional

Probab=98.70  E-value=4.4e-08  Score=79.32  Aligned_cols=81  Identities=19%  Similarity=0.152  Sum_probs=55.2

Q ss_pred             CCcEEEeCCc----------------chHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCc
Q 039049            1 MPEYCVTGGT----------------GFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME   64 (305)
Q Consensus         1 m~~ilItG~~----------------G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~   64 (305)
                      .|+||||+|.                ||+|++|++.|+.+|++|+++.+.......  .   .+ ....+..+.++....
T Consensus         3 gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~--~---~~-~~~~~~~V~s~~d~~   76 (229)
T PRK09620          3 GKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN--D---IN-NQLELHPFEGIIDLQ   76 (229)
T ss_pred             CCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc--c---cC-CceeEEEEecHHHHH
Confidence            3789999885                999999999999999999999754221110  0   00 011334455533333


Q ss_pred             chHHHHhc--CCCEEEEeccccccC
Q 039049           65 GSFDEAIQ--GVDGVFHTASPVLVP   87 (305)
Q Consensus        65 ~~~~~~~~--~~d~Vi~~a~~~~~~   87 (305)
                      +.+.+++.  ++|+|||+||.....
T Consensus        77 ~~l~~~~~~~~~D~VIH~AAvsD~~  101 (229)
T PRK09620         77 DKMKSIITHEKVDAVIMAAAGSDWV  101 (229)
T ss_pred             HHHHHHhcccCCCEEEECcccccee
Confidence            56777774  689999999996643

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.69  E-value=6.5e-08  Score=78.63  Aligned_cols=67  Identities=15%  Similarity=0.229  Sum_probs=47.5

Q ss_pred             cchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCC--cchHHHHhcCCCEEEEeccccc
Q 039049           10 TGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLM--EGSFDEAIQGVDGVFHTASPVL   85 (305)
Q Consensus        10 ~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~d~Vi~~a~~~~   85 (305)
                      |||+|++|++.|+++|++|+++.|+......         ...++.++.++..+  .+.+.+.++++|+|||+||...
T Consensus        25 SG~iG~aLA~~L~~~G~~V~li~r~~~~~~~---------~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvsd   93 (229)
T PRK06732         25 TGQLGKIIAETFLAAGHEVTLVTTKTAVKPE---------PHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVSD   93 (229)
T ss_pred             chHHHHHHHHHHHhCCCEEEEEECcccccCC---------CCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccCC
Confidence            6999999999999999999999876421110         01255666644322  2345566778999999999865

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.67  E-value=9.5e-08  Score=84.42  Aligned_cols=76  Identities=25%  Similarity=0.414  Sum_probs=58.3

Q ss_pred             EEEeCCcchHHHHHHHHHHHcC-C-eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            4 YCVTGGTGFIAAHLVKALLDKG-H-MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         4 ilItG~~G~iG~~l~~~l~~~g-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      |+|+|| |++|+.+++.|++.+ + +|++.+|+.++.......  .  ...++++++.|+.|.+++.+++++.|+||||+
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~--~--~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~   75 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEK--L--LGDRVEAVQVDVNDPESLAELLRGCDVVINCA   75 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT------TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-S
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhh--c--cccceeEEEEecCCHHHHHHHHhcCCEEEECC
Confidence            799999 999999999999987 4 899999998754332110  0  24589999999999999999999999999999


Q ss_pred             ccc
Q 039049           82 SPV   84 (305)
Q Consensus        82 ~~~   84 (305)
                      +..
T Consensus        76 gp~   78 (386)
T PF03435_consen   76 GPF   78 (386)
T ss_dssp             SGG
T ss_pred             ccc
Confidence            885

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>cd00704 MDH Malate dehydrogenase

Probab=98.57  E-value=9.7e-07  Score=75.43  Aligned_cols=106  Identities=17%  Similarity=0.105  Sum_probs=74.4

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCC-------eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCc-----------
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGH-------MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME-----------   64 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-----------   64 (305)
                      ||.|+||+|.+|++++..|+..|.       ++.+++++... +             ..+....|+.|.           
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~-~-------------~~~g~~~Dl~d~~~~~~~~~~i~   67 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM-K-------------ALEGVVMELQDCAFPLLKGVVIT   67 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc-C-------------ccceeeeehhhhcccccCCcEEe
Confidence            799999999999999999987652       58888887520 0             112222233222           


Q ss_pred             chHHHHhcCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcC-CccEEEEec
Q 039049           65 GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAK-SVKRVVLTS  124 (305)
Q Consensus        65 ~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~S  124 (305)
                      ....+.++++|+|||+||....+  .....+.+..|+...+.+...+++.. .-..+|.+|
T Consensus        68 ~~~~~~~~~aDiVVitAG~~~~~--g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs  126 (323)
T cd00704          68 TDPEEAFKDVDVAILVGAFPRKP--GMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG  126 (323)
T ss_pred             cChHHHhCCCCEEEEeCCCCCCc--CCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            24557788999999999986543  33566689999999999999998872 223455554

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.50  E-value=3.6e-07  Score=72.66  Aligned_cols=80  Identities=25%  Similarity=0.204  Sum_probs=60.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      ++++|+||+|.+|+.+++.|++.|++|++++|+.++.......  .. ...+.....+|..+.+++.+++.++|+||++.
T Consensus        29 ~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~--l~-~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at  105 (194)
T cd01078          29 KTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADS--LR-ARFGEGVGAVETSDDAARAAAIKGADVVFAAG  105 (194)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH--HH-hhcCCcEEEeeCCCHHHHHHHHhcCCEEEECC
Confidence            6899999999999999999999999999999986543322111  11 01134455678888888889999999999876


Q ss_pred             ccc
Q 039049           82 SPV   84 (305)
Q Consensus        82 ~~~   84 (305)
                      +..
T Consensus       106 ~~g  108 (194)
T cd01078         106 AAG  108 (194)
T ss_pred             CCC
Confidence            553

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=98.43  E-value=4e-06  Score=71.72  Aligned_cols=106  Identities=15%  Similarity=0.052  Sum_probs=74.4

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCC-------eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcc----------
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGH-------MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG----------   65 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~----------   65 (305)
                      +|.|+|++|.+|++++..|...+.       ++.++++++....              ......|+.|..          
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~--------------a~g~~~Dl~d~~~~~~~~~~~~   66 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKV--------------LEGVVMELMDCAFPLLDGVVPT   66 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccc--------------cceeEeehhcccchhcCceecc
Confidence            689999999999999999987542       5888888654211              122223333322          


Q ss_pred             -hHHHHhcCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcC-CccEEEEec
Q 039049           66 -SFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAK-SVKRVVLTS  124 (305)
Q Consensus        66 -~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~S  124 (305)
                       ...+.++++|+||++||.....  .....+.+..|+...+.+.+.++++. .-..+|.+|
T Consensus        67 ~~~~~~~~~aDiVVitAG~~~~~--~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvs  125 (324)
T TIGR01758        67 HDPAVAFTDVDVAILVGAFPRKE--GMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVG  125 (324)
T ss_pred             CChHHHhCCCCEEEEcCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence             3356788999999999986542  23457789999999999999998872 223455555

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.43  E-value=4.4e-07  Score=75.69  Aligned_cols=83  Identities=19%  Similarity=0.208  Sum_probs=64.9

Q ss_pred             EEEeCCcchHHHHHHHHHHH----cCCeEEEEEeCCCcccchhhhhhccC--ccCceEEEEccCCCcchHHHHhcCCCEE
Q 039049            4 YCVTGGTGFIAAHLVKALLD----KGHMVRTTVRDPEDLSKVGFLWELNG--AEERLKIMKADLLMEGSFDEAIQGVDGV   77 (305)
Q Consensus         4 ilItG~~G~iG~~l~~~l~~----~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~d~V   77 (305)
                      ++|.||+||.|..+++++.+    .|...-+.+|++.+..+.-.......  ...+..++.+|..|++++.+..+.+-+|
T Consensus         8 vVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~vi   87 (423)
T KOG2733|consen    8 VVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQARVI   87 (423)
T ss_pred             EEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhEEE
Confidence            78999999999999999998    67888999999876543222111111  1123448889999999999999999999


Q ss_pred             EEecccccc
Q 039049           78 FHTASPVLV   86 (305)
Q Consensus        78 i~~a~~~~~   86 (305)
                      +||+|+...
T Consensus        88 vN~vGPyR~   96 (423)
T KOG2733|consen   88 VNCVGPYRF   96 (423)
T ss_pred             Eecccccee
Confidence            999998764

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=98.42  E-value=5.9e-05  Score=59.60  Aligned_cols=210  Identities=14%  Similarity=0.119  Sum_probs=121.4

Q ss_pred             CcEEEeCCc--chHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            2 PEYCVTGGT--GFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~~--G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      |++||+|-.  --|+..+++.|.+.|.++......+.-...   ..++....+..-+++||.++.+.+.++++       
T Consensus         7 K~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~kr---v~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~g   83 (259)
T COG0623           7 KRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKR---VEELAEELGSDLVLPCDVTNDESIDALFATIKKKWG   83 (259)
T ss_pred             ceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHH---HHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhhC
Confidence            789999965  459999999999999998777666521111   22222222234578899999998888875       


Q ss_pred             CCCEEEEeccccccCC--------CCchhhhhhhhhHHHHHHHHHHHHhcC-CccEEE---EeccceeeeccCCCCCCcc
Q 039049           73 GVDGVFHTASPVLVPY--------DNNIQATLIDPCIKGTLNVLSSCKKAK-SVKRVV---LTSSCSSIRYRHDAQQVSP  140 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v---~~SS~~~~~~~~~~~~~~~  140 (305)
                      ++|.++|+.|......        +.+.+....++-......+.++++..- +...+|   |.+|..+..          
T Consensus        84 ~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~r~vP----------  153 (259)
T COG0623          84 KLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSERVVP----------  153 (259)
T ss_pred             cccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccceeecC----------
Confidence            6799999999765321        122333333333334444454444321 122333   333322211          


Q ss_pred             cCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCC---chHHHHHHHHhcCCC
Q 039049          141 LNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPT---STLLLILAMVKGLRG  214 (305)
Q Consensus       141 ~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~---~~~~~~~~~~~~~~~  214 (305)
                               .+     +.-|.+|...|--++.++.+.   |+++.-+-.|    |-..-...   ....++.......+ 
T Consensus       154 ---------nY-----NvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAG----PIrTLAasgI~~f~~~l~~~e~~aP-  214 (259)
T COG0623         154 ---------NY-----NVMGVAKAALEASVRYLAADLGKEGIRVNAISAG----PIRTLAASGIGDFRKMLKENEANAP-  214 (259)
T ss_pred             ---------CC-----chhHHHHHHHHHHHHHHHHHhCccCeEEeeeccc----chHHHHhhccccHHHHHHHHHhhCC-
Confidence                     11     668999999999988888776   4555554443    32211111   11122222222222 


Q ss_pred             CCCCCCccceeHHHHHHHHHHhhcccc---cCceEEE
Q 039049          215 EYPNTTVGFVHIDDVVGAHILAMEETR---ASGRLIC  248 (305)
Q Consensus       215 ~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~  248 (305)
                           .+.-+.++|+...-.+++..-.   ++++.++
T Consensus       215 -----l~r~vt~eeVG~tA~fLlSdLssgiTGei~yV  246 (259)
T COG0623         215 -----LRRNVTIEEVGNTAAFLLSDLSSGITGEIIYV  246 (259)
T ss_pred             -----ccCCCCHHHhhhhHHHHhcchhcccccceEEE
Confidence                 4445668888888888876533   3455555

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=98.36  E-value=5.1e-06  Score=62.24  Aligned_cols=113  Identities=16%  Similarity=0.117  Sum_probs=75.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC--CeEEEEEeCCCcccc-hhhhhhccCcc-CceEEEEccCCCcchHHHHhcCCCEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG--HMVRTTVRDPEDLSK-VGFLWELNGAE-ERLKIMKADLLMEGSFDEAIQGVDGV   77 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~-~~~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~d~V   77 (305)
                      |||.|+|++|.+|++++..|...+  .++.+++++...... ...+....... .+.....   .++    +.++++|+|
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~----~~~~~aDiv   73 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDY----EALKDADIV   73 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSG----GGGTTESEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---ccc----cccccccEE
Confidence            689999999999999999999887  489999888643221 11122211111 1222222   222    336689999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCcc-EEEEec
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVK-RVVLTS  124 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~S  124 (305)
                      |-+||....+  .....+.++.|....+.+.+.+.+. +.. .++.+|
T Consensus        74 vitag~~~~~--g~sR~~ll~~N~~i~~~~~~~i~~~-~p~~~vivvt  118 (141)
T PF00056_consen   74 VITAGVPRKP--GMSRLDLLEANAKIVKEIAKKIAKY-APDAIVIVVT  118 (141)
T ss_dssp             EETTSTSSST--TSSHHHHHHHHHHHHHHHHHHHHHH-STTSEEEE-S
T ss_pred             EEeccccccc--cccHHHHHHHhHhHHHHHHHHHHHh-CCccEEEEeC
Confidence            9999986532  2345668899999999999999988 433 445444

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.32  E-value=6.7e-07  Score=76.25  Aligned_cols=70  Identities=27%  Similarity=0.304  Sum_probs=51.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHc-C-CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDK-G-HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~-g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~   79 (305)
                      ++|+||||+|+||++++++|+++ | .+++++.|+..+.....   .        ++..+++.   .+.+++.++|+|||
T Consensus       156 k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La---~--------el~~~~i~---~l~~~l~~aDiVv~  221 (340)
T PRK14982        156 ATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQ---A--------ELGGGKIL---SLEEALPEADIVVW  221 (340)
T ss_pred             CEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHH---H--------HhccccHH---hHHHHHccCCEEEE
Confidence            68999999999999999999864 5 58999988765332211   1        11123433   36678889999999


Q ss_pred             eccccc
Q 039049           80 TASPVL   85 (305)
Q Consensus        80 ~a~~~~   85 (305)
                      +++...
T Consensus       222 ~ts~~~  227 (340)
T PRK14982        222 VASMPK  227 (340)
T ss_pred             CCcCCc
Confidence            998855

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.29  E-value=2.1e-06  Score=75.27  Aligned_cols=73  Identities=16%  Similarity=0.150  Sum_probs=56.3

Q ss_pred             CcEEEeCC----------------cchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcc
Q 039049            2 PEYCVTGG----------------TGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG   65 (305)
Q Consensus         2 ~~ilItG~----------------~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~   65 (305)
                      ++|+||||                +|.+|.++++.|+++|++|+++.++.. ..       .+   .+  ....|+.+.+
T Consensus       189 k~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-------~~---~~--~~~~dv~~~~  255 (399)
T PRK05579        189 KRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-------TP---AG--VKRIDVESAQ  255 (399)
T ss_pred             CEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-------CC---CC--cEEEccCCHH
Confidence            68999999                999999999999999999999987652 11       01   01  2356888877


Q ss_pred             hHHHHh----cCCCEEEEeccccccC
Q 039049           66 SFDEAI----QGVDGVFHTASPVLVP   87 (305)
Q Consensus        66 ~~~~~~----~~~d~Vi~~a~~~~~~   87 (305)
                      ++.+.+    .++|++||+||.....
T Consensus       256 ~~~~~v~~~~~~~DilI~~Aav~d~~  281 (399)
T PRK05579        256 EMLDAVLAALPQADIFIMAAAVADYR  281 (399)
T ss_pred             HHHHHHHHhcCCCCEEEEcccccccc
Confidence            766655    3689999999986543

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=98.25  E-value=2.6e-06  Score=69.19  Aligned_cols=63  Identities=16%  Similarity=0.161  Sum_probs=44.3

Q ss_pred             cchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHh-------cCCCEEEEecc
Q 039049           10 TGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAI-------QGVDGVFHTAS   82 (305)
Q Consensus        10 ~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-------~~~d~Vi~~a~   82 (305)
                      +|.||+++++.|+++|++|+++.+... ..      .       .....+|+.+.+...+++       .++|++||+||
T Consensus        24 SGgIG~AIA~~la~~Ga~Vvlv~~~~~-l~------~-------~~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAg   89 (227)
T TIGR02114        24 TGHLGKIITETFLSAGHEVTLVTTKRA-LK------P-------EPHPNLSIREIETTKDLLITLKELVQEHDILIHSMA   89 (227)
T ss_pred             ccHHHHHHHHHHHHCCCEEEEEcChhh-cc------c-------ccCCcceeecHHHHHHHHHHHHHHcCCCCEEEECCE
Confidence            699999999999999999999876321 00      0       001346777766555443       36899999999


Q ss_pred             cccc
Q 039049           83 PVLV   86 (305)
Q Consensus        83 ~~~~   86 (305)
                      ....
T Consensus        90 v~d~   93 (227)
T TIGR02114        90 VSDY   93 (227)
T ss_pred             eccc
Confidence            7543

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=98.19  E-value=6.2e-06  Score=72.02  Aligned_cols=101  Identities=17%  Similarity=0.209  Sum_probs=63.8

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHc-CCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHH-HhcCCCEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDK-GHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDE-AIQGVDGVF   78 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~d~Vi   78 (305)
                      ++||.|+||||++|+.|++.|++. +.+|..+.++.+........        .......|..+.+.+.. .++++|+||
T Consensus        38 ~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~--------~~~l~~~~~~~~~~~~~~~~~~~DvVf  109 (381)
T PLN02968         38 KKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSV--------FPHLITQDLPNLVAVKDADFSDVDAVF  109 (381)
T ss_pred             ccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhh--------CccccCccccceecCCHHHhcCCCEEE
Confidence            468999999999999999999988 57999998764422111110        11112234433333332 257899999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeee
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIR  130 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~  130 (305)
                      -+.+..                  ....++..+ +. + +++|-+|+..-+-
T Consensus       110 ~Alp~~------------------~s~~i~~~~-~~-g-~~VIDlSs~fRl~  140 (381)
T PLN02968        110 CCLPHG------------------TTQEIIKAL-PK-D-LKIVDLSADFRLR  140 (381)
T ss_pred             EcCCHH------------------HHHHHHHHH-hC-C-CEEEEcCchhccC
Confidence            876442                  245556555 34 5 6899999877443

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=98.19  E-value=1.1e-05  Score=69.71  Aligned_cols=93  Identities=17%  Similarity=0.194  Sum_probs=59.5

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCC---eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGH---MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGV   77 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~V   77 (305)
                      |++|+|+||||++|++|++.|+++||   ++.++.+..+......    .    .+......|+.+     ..++++|+|
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~----~----~g~~i~v~d~~~-----~~~~~vDvV   67 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELS----F----KGKELKVEDLTT-----FDFSGVDIA   67 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeee----e----CCceeEEeeCCH-----HHHcCCCEE
Confidence            78999999999999999999999876   4577777644322211    0    012333345432     123689999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccc
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSC  126 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~  126 (305)
                      |-+++...                  +..+...+.++ |+ ++|=+||.
T Consensus        68 f~A~g~g~------------------s~~~~~~~~~~-G~-~VIDlS~~   96 (334)
T PRK14874         68 LFSAGGSV------------------SKKYAPKAAAA-GA-VVIDNSSA   96 (334)
T ss_pred             EECCChHH------------------HHHHHHHHHhC-CC-EEEECCch
Confidence            98876532                  33444455555 65 67766764

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=98.19  E-value=9.1e-06  Score=65.95  Aligned_cols=74  Identities=23%  Similarity=0.311  Sum_probs=59.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHH-hcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEA-IQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~Vi~~   80 (305)
                      |+++|.|+ |-+|+++++.|.+.||+|+++.++++.......      .......+.+|-+|++.++++ ++++|+++-+
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~------~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~   73 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLA------DELDTHVVIGDATDEDVLEEAGIDDADAVVAA   73 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhh------hhcceEEEEecCCCHHHHHhcCCCcCCEEEEe
Confidence            67899996 999999999999999999999998764333111      012678999999999999998 7899999965


Q ss_pred             cc
Q 039049           81 AS   82 (305)
Q Consensus        81 a~   82 (305)
                      .+
T Consensus        74 t~   75 (225)
T COG0569          74 TG   75 (225)
T ss_pred             eC
Confidence            43

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=98.13  E-value=5.3e-05  Score=55.24  Aligned_cols=97  Identities=18%  Similarity=0.209  Sum_probs=55.1

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcC-CeEEEEEeCCC-cccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKG-HMVRTTVRDPE-DLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ||.|+||||++|+.|++.|++.. .++..+..+.. ...........+.....+.+..   .+.    ..+.++|+||.|
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~Dvvf~a   73 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED---ADP----EELSDVDVVFLA   73 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE---TSG----HHHTTESEEEE-
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee---cch----hHhhcCCEEEec
Confidence            68999999999999999999854 46555554443 2222222221111111222222   222    224789999988


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccc
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSC  126 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~  126 (305)
                      .+...                  ...+...+.+. |+ ++|=.|+.
T Consensus        74 ~~~~~------------------~~~~~~~~~~~-g~-~ViD~s~~   99 (121)
T PF01118_consen   74 LPHGA------------------SKELAPKLLKA-GI-KVIDLSGD   99 (121)
T ss_dssp             SCHHH------------------HHHHHHHHHHT-TS-EEEESSST
T ss_pred             CchhH------------------HHHHHHHHhhC-Cc-EEEeCCHH
Confidence            65422                  33455555566 65 67766664

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=98.13  E-value=2.3e-05  Score=66.83  Aligned_cols=116  Identities=12%  Similarity=0.123  Sum_probs=73.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC--eEEEEEeCC--Ccccchh-hhhhc-cCccCceEEEEccCCCcchHHHHhcCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH--MVRTTVRDP--EDLSKVG-FLWEL-NGAEERLKIMKADLLMEGSFDEAIQGVD   75 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~--~~~~~~~-~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~d   75 (305)
                      |||.|+|++|.+|.+++..|+..|+  +|++++|..  +...... .+... .......     .+.-..+.. .+.++|
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~-----~i~~~~d~~-~l~~aD   74 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDA-----EIKISSDLS-DVAGSD   74 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCc-----EEEECCCHH-HhCCCC
Confidence            6899999999999999999999986  599999954  2211110 01000 0000011     111111233 488999


Q ss_pred             EEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEecc
Q 039049           76 GVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSS  125 (305)
Q Consensus        76 ~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS  125 (305)
                      +||-+++.....  .....+.++.|+...+.+.+.+.+...-.++|.+++
T Consensus        75 iViitag~p~~~--~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~n  122 (309)
T cd05294          75 IVIITAGVPRKE--GMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTN  122 (309)
T ss_pred             EEEEecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            999999975432  223456789999999999998877632235666665

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.08  E-value=1.3e-05  Score=67.64  Aligned_cols=83  Identities=11%  Similarity=0.009  Sum_probs=59.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCe-EEEEEeCCCcccchhhhh-hccCccCceEEEEccCCCcchHHHHhcCCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHM-VRTTVRDPEDLSKVGFLW-ELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~-V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~   79 (305)
                      ++++|+|| |.+|++++..|++.|.+ |++++|+.+.......+. .+......+....+|+.+.+.+.+.++++|+|||
T Consensus       127 k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~DilIN  205 (289)
T PRK12548        127 KKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDILVN  205 (289)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEEEE
Confidence            57999998 89999999999999985 999999863111111111 1111122445667888887788888888999999


Q ss_pred             eccccc
Q 039049           80 TASPVL   85 (305)
Q Consensus        80 ~a~~~~   85 (305)
                      +-....
T Consensus       206 aTp~Gm  211 (289)
T PRK12548        206 ATLVGM  211 (289)
T ss_pred             eCCCCC
Confidence            877654

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=97.97  E-value=2.3e-05  Score=68.58  Aligned_cols=100  Identities=13%  Similarity=0.146  Sum_probs=69.5

Q ss_pred             CcEEEeCC----------------cchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcc
Q 039049            2 PEYCVTGG----------------TGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG   65 (305)
Q Consensus         2 ~~ilItG~----------------~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~   65 (305)
                      ++|+||||                +|.+|.++++.|..+|++|+++.+......        +   ..  ....|+.+.+
T Consensus       186 ~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~~--------~---~~--~~~~~v~~~~  252 (390)
T TIGR00521       186 KRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLLT--------P---PG--VKSIKVSTAE  252 (390)
T ss_pred             ceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccCC--------C---CC--cEEEEeccHH
Confidence            68999998                468999999999999999999987653210        1   12  2456887777


Q ss_pred             hH-HHHh----cCCCEEEEeccccccCCC---Cc---hhhhhhhhhHHHHHHHHHHHHhc
Q 039049           66 SF-DEAI----QGVDGVFHTASPVLVPYD---NN---IQATLIDPCIKGTLNVLSSCKKA  114 (305)
Q Consensus        66 ~~-~~~~----~~~d~Vi~~a~~~~~~~~---~~---~~~~~~~~n~~~~~~l~~~~~~~  114 (305)
                      ++ .+++    .++|++||+||.......   .+   .....+..|+..+..+++.+++.
T Consensus       253 ~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~  312 (390)
T TIGR00521       253 EMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKI  312 (390)
T ss_pred             HHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhh
Confidence            66 4444    368999999998765321   10   01123457777888888887765

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.91  E-value=1.4e-05  Score=66.34  Aligned_cols=77  Identities=13%  Similarity=0.172  Sum_probs=58.5

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEecc
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTAS   82 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a~   82 (305)
                      .++|-|||||.|.-++++|...|.+-.+.+|+..+.......   -  ++++..  .++-+++.+.+++..+.+|+||+|
T Consensus         8 d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~---L--G~~~~~--~p~~~p~~~~~~~~~~~VVlncvG   80 (382)
T COG3268           8 DIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRAS---L--GPEAAV--FPLGVPAALEAMASRTQVVLNCVG   80 (382)
T ss_pred             eEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHh---c--Cccccc--cCCCCHHHHHHHHhcceEEEeccc
Confidence            489999999999999999999999888888987754432211   1  123333  344448888999999999999999


Q ss_pred             cccc
Q 039049           83 PVLV   86 (305)
Q Consensus        83 ~~~~   86 (305)
                      +...
T Consensus        81 Pyt~   84 (382)
T COG3268          81 PYTR   84 (382)
T ss_pred             cccc
Confidence            8764

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=97.89  E-value=5.2e-05  Score=73.71  Aligned_cols=77  Identities=16%  Similarity=0.072  Sum_probs=58.0

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcC-Ce-------------EEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcch
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKG-HM-------------VRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGS   66 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g-~~-------------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~   66 (305)
                      |++|+|+|+ |++|+..++.|++.+ .+             |++.+++.+....   +..   ..++++.++.|..|.++
T Consensus       569 ~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~---la~---~~~~~~~v~lDv~D~e~  641 (1042)
T PLN02819        569 SQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKE---TVE---GIENAEAVQLDVSDSES  641 (1042)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHH---HHH---hcCCCceEEeecCCHHH
Confidence            679999997 999999999998753 33             6666665543222   111   12267889999999999


Q ss_pred             HHHHhcCCCEEEEecccc
Q 039049           67 FDEAIQGVDGVFHTASPV   84 (305)
Q Consensus        67 ~~~~~~~~d~Vi~~a~~~   84 (305)
                      +.++++++|+||++....
T Consensus       642 L~~~v~~~DaVIsalP~~  659 (1042)
T PLN02819        642 LLKYVSQVDVVISLLPAS  659 (1042)
T ss_pred             HHHhhcCCCEEEECCCch
Confidence            999989999999998764

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=97.88  E-value=9.1e-05  Score=64.19  Aligned_cols=229  Identities=14%  Similarity=0.103  Sum_probs=112.3

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHc-CCeEEEEEeCCCcccchhhhhhccCccCceEEE-EccCCCcchHHHHhcCCCEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDK-GHMVRTTVRDPEDLSKVGFLWELNGAEERLKIM-KADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      |++|+|+||||++|+++++.|++. +.++.++.++.+........      .+++... ..++.+.+..  .++++|+||
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~------~~~~~~~~~~~~~~~~~~--~~~~vD~Vf   73 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDV------HPHLRGLVDLVLEPLDPE--ILAGADVVF   73 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHh------CcccccccCceeecCCHH--HhcCCCEEE
Confidence            689999999999999999999876 57888877643321111110      0011111 1123333322  456799999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccC---------C-CC---C--CcccCC
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRH---------D-AQ---Q--VSPLNE  143 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~---------~-~~---~--~~~~~E  143 (305)
                      -|.....                  ...+...+.++ | +++|=.|+..-+....         . .+   .  -.-+.|
T Consensus        74 ~alP~~~------------------~~~~v~~a~~a-G-~~VID~S~~fR~~~~~~~~~~y~~~~~~~~~~~~~~~~lpe  133 (343)
T PRK00436         74 LALPHGV------------------SMDLAPQLLEA-G-VKVIDLSADFRLKDPEVYEKWYGFEHAAPELLKEAVYGLPE  133 (343)
T ss_pred             ECCCcHH------------------HHHHHHHHHhC-C-CEEEECCcccCCCCchhhHHhcCCCCCCchhhcCceeecCc
Confidence            7654421                  23444455555 5 5788888765432200         0 00   0  001111


Q ss_pred             CCC---CCcccccccchhHHHHHHHHHHHHHHHHHHcCCc---EEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCC
Q 039049          144 SHW---SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGID---MVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYP  217 (305)
Q Consensus       144 ~~~---~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~---~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (305)
                      -..   .... .....+.|..+-..+=.-+   .+...++   +++--...+-|.+............    .+....+.
T Consensus       134 ~~~~~i~~~~-iIanPgC~~t~~~l~L~PL---~~~~~i~~~~i~v~~~~g~SGaG~~~~~~~~~~~~----~~~~~~y~  205 (343)
T PRK00436        134 LNREEIKGAR-LIANPGCYPTASLLALAPL---LKAGLIDPDSIIIDAKSGVSGAGRKASEGTLFSEV----NENLRPYK  205 (343)
T ss_pred             cCHHHhcCCC-EEECCCCHHHHHHHHHHHH---HHcCCCCCCCEEEEEEEecccCCCCccccccchhh----cCCeeecc
Confidence            110   0001 1111255766655554333   2333343   6665566666666443222111111    11111111


Q ss_pred             CCCccceeHHHHHHHHHHhhc--------ccccCce---EEE-ecCCcCHHHHHHHHHHhCC
Q 039049          218 NTTVGFVHIDDVVGAHILAME--------ETRASGR---LIC-SSSVAHWSPIIEMLKATYP  267 (305)
Q Consensus       218 ~~~~~~i~v~D~a~~~~~~~~--------~~~~~~~---~~~-~~~~~s~~el~~~i~~~~~  267 (305)
                        ...-.|...+.+.+..++.        -|-..|.   .++ ..+.++..|+.+.+.+.+.
T Consensus       206 --~~~h~h~~Ei~~~l~~~~~~v~~t~~~vPv~~G~~~tv~v~~~~~~~~~~~~~~~~~~y~  265 (343)
T PRK00436        206 --VGGHRHTPEIEQELSALAGEVSFTPHLVPMTRGILATIYARLKDPVTAEDVRAAYEEFYA  265 (343)
T ss_pred             --cCCCCCHHHHHHHHHHhcCCEEEEeEEecccCcEEEEEEEEeCCCCCHHHHHHHHHHHhC
Confidence              1233477776666654431        0111222   233 3568999999999997663

>PRK06223 malate dehydrogenase; Reviewed

Probab=97.87  E-value=0.00016  Score=61.86  Aligned_cols=115  Identities=19%  Similarity=0.090  Sum_probs=73.1

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchh-hhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVG-FLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      |+||.|+|+ |.+|..++..++..|. +|.+++++++...... .+.....    .......+....++ +.++++|+||
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~----~~~~~~~i~~~~d~-~~~~~aDiVi   75 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAP----VEGFDTKITGTNDY-EDIAGSDVVV   75 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhh----hcCCCcEEEeCCCH-HHHCCCCEEE
Confidence            889999998 9999999999998875 9999999766432211 1111100    00000111111223 3478999999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCcc-EEEEec
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVK-RVVLTS  124 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~S  124 (305)
                      .+++.....  .....+.+..|+.....+++.+.+. ..+ .+|.+|
T Consensus        76 i~~~~p~~~--~~~r~~~~~~n~~i~~~i~~~i~~~-~~~~~viv~t  119 (307)
T PRK06223         76 ITAGVPRKP--GMSRDDLLGINAKIMKDVAEGIKKY-APDAIVIVVT  119 (307)
T ss_pred             ECCCCCCCc--CCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEec
Confidence            999875432  2234456778898899999888777 333 455554

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.85  E-value=0.00024  Score=60.73  Aligned_cols=113  Identities=16%  Similarity=0.131  Sum_probs=74.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC--CeEEEEEeCCCcccch-hhhhhccC-ccCceEEEEccCCCcchHHHHhcCCCEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG--HMVRTTVRDPEDLSKV-GFLWELNG-AEERLKIMKADLLMEGSFDEAIQGVDGV   77 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~-~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~V   77 (305)
                      +||.|+|+ |.+|+.++..|+..|  ++|.+++|+.+..... ..+..... ........ .  .+   . +.+.++|+|
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~--~~---~-~~l~~aDIV   72 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-A--GD---Y-SDCKDADIV   72 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-c--CC---H-HHhCCCCEE
Confidence            47999996 999999999999999  6899999987653322 11111110 01111222 1  12   2 236799999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEec
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS  124 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  124 (305)
                      |++++.....  .....+.++.|....+.+.+.++++..-..++.+|
T Consensus        73 Iitag~~~~~--g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvs  117 (306)
T cd05291          73 VITAGAPQKP--GETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVAS  117 (306)
T ss_pred             EEccCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            9999986443  23445688999999999999998873222455554

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=97.85  E-value=0.00031  Score=60.16  Aligned_cols=170  Identities=15%  Similarity=0.096  Sum_probs=99.1

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCC-------eEEEEEeCCCc--cc-chhhhhhcc-CccCceEEEEccCCCcchHHHHh
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGH-------MVRTTVRDPED--LS-KVGFLWELN-GAEERLKIMKADLLMEGSFDEAI   71 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~-------~V~~~~r~~~~--~~-~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~   71 (305)
                      ||.|+|++|.+|++++..|+..|.       ++.++++++..  .. ....+.... ....++.+ .      ....+.+
T Consensus         5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i-~------~~~~~~~   77 (323)
T TIGR01759         5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVA-T------TDPEEAF   77 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEE-e------cChHHHh
Confidence            799999999999999999988873       78888886422  11 111111111 00011111 1      1233557


Q ss_pred             cCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCc-c-EEEEeccceeeeccCCCCCCcccCCCCCCCc
Q 039049           72 QGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSV-K-RVVLTSSCSSIRYRHDAQQVSPLNESHWSDP  149 (305)
Q Consensus        72 ~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~-~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~  149 (305)
                      +++|+||.+||.....  .....+.+..|....+.+.+.++++ .- . .++.+|- -+ .-..     ....+..+..|
T Consensus        78 ~daDvVVitAG~~~k~--g~tR~dll~~Na~i~~~i~~~i~~~-~~~~~iiivvsN-Pv-Dv~t-----~v~~k~s~g~p  147 (323)
T TIGR01759        78 KDVDAALLVGAFPRKP--GMERADLLSKNGKIFKEQGKALNKV-AKKDVKVLVVGN-PA-NTNA-----LIASKNAPDIP  147 (323)
T ss_pred             CCCCEEEEeCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHhh-CCCCeEEEEeCC-cH-HHHH-----HHHHHHcCCCC
Confidence            7899999999985432  3455668999999999999999988 43 3 4444442 11 0000     01111110011


Q ss_pred             ccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCC
Q 039049          150 DYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLL  194 (305)
Q Consensus       150 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~  194 (305)
                      .     +...|.+.+..-++-...++..+++...++-..|+|...
T Consensus       148 ~-----~rViG~t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG  187 (323)
T TIGR01759       148 P-----KNFSAMTRLDHNRAKYQLAAKAGVPVSDVKNVIIWGNHS  187 (323)
T ss_pred             H-----HHEEEeeHHHHHHHHHHHHHHhCcChHHeEEeEEEecCC
Confidence            0     022333455555555555666788877777777878654

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=97.84  E-value=0.00034  Score=59.46  Aligned_cols=173  Identities=16%  Similarity=0.071  Sum_probs=98.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC--CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG--HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~   79 (305)
                      |||.|+|++|.+|++++..|+..|  .++.+++++.... ..-.+...   .... .+.+ ....+++.+.++++|+||-
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~a~g-~alDL~~~---~~~~-~i~~-~~~~~~~y~~~~daDivvi   74 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPG-VAADLSHI---NTPA-KVTG-YLGPEELKKALKGADVVVI   74 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCccce-eehHhHhC---CCcc-eEEE-ecCCCchHHhcCCCCEEEE
Confidence            589999999999999999998888  4788888761111 11112111   1111 1111 0011234566889999999


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCcc-EEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchh
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVK-RVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLW  158 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  158 (305)
                      +||....+  .....+.++.|....+.+.+..+++ +.. .+|.+|-..-....--.  .........+ +.      ..
T Consensus        75 taG~~~k~--g~tR~dll~~N~~i~~~i~~~i~~~-~p~a~vivvtNPvDv~~~i~t--~~~~~~s~~p-~~------rv  142 (310)
T cd01337          75 PAGVPRKP--GMTRDDLFNINAGIVRDLATAVAKA-CPKALILIISNPVNSTVPIAA--EVLKKAGVYD-PK------RL  142 (310)
T ss_pred             eCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEccCchhhHHHHHH--HHHHHhcCCC-HH------HE
Confidence            99986432  3345668999999999999999888 433 44554432200000000  0000011111 00      22


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCC
Q 039049          159 YAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPL  193 (305)
Q Consensus       159 Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~  193 (305)
                      .|..-+..-++....++..+++..-++ +.++|..
T Consensus       143 iG~~~LDs~R~~~~la~~l~v~~~~V~-~~v~GeH  176 (310)
T cd01337         143 FGVTTLDVVRANTFVAELLGLDPAKVN-VPVIGGH  176 (310)
T ss_pred             EeeechHHHHHHHHHHHHhCcCHHHEE-EEEEecC
Confidence            333334444555555667788777777 7888876

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.83  E-value=3.1e-05  Score=66.28  Aligned_cols=36  Identities=28%  Similarity=0.405  Sum_probs=32.9

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCc
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPED   37 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~   37 (305)
                      ||+|.|+| .|.+|..++..|++.|++|++.+|+++.
T Consensus         2 ~~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~   37 (308)
T PRK06129          2 MGSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAA   37 (308)
T ss_pred             CcEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHH
Confidence            57899999 6999999999999999999999998753

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=97.82  E-value=0.0003  Score=60.07  Aligned_cols=103  Identities=17%  Similarity=0.162  Sum_probs=70.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC--CeEEEEEeCCCccc-chhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG--HMVRTTVRDPEDLS-KVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      |||.|+|+ |.+|..++..|+..|  .+|.+++++..... ....+...............   |   + +.++++|+||
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~---d---~-~~l~~aDiVi   72 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAG---D---Y-ADCKGADVVV   72 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeC---C---H-HHhCCCCEEE
Confidence            47999997 999999999999999  68999999875433 12222221111112221111   2   2 3478999999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhc
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKA  114 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  114 (305)
                      .+++.....  .....+....|+.....+.+.+++.
T Consensus        73 ita~~~~~~--~~~r~dl~~~n~~i~~~~~~~l~~~  106 (308)
T cd05292          73 ITAGANQKP--GETRLDLLKRNVAIFKEIIPQILKY  106 (308)
T ss_pred             EccCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            999976532  2344557889999999999998887

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.81  E-value=0.00036  Score=59.70  Aligned_cols=112  Identities=15%  Similarity=0.137  Sum_probs=74.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC--eEEEEEeCCCcccc-hhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH--MVRTTVRDPEDLSK-VGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      +||.|+|+ |.+|.+++..|+..|.  ++.+++++.+.... ...+........++.....   +   . +.++++|+||
T Consensus         7 ~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~---~---~-~~~~~adivI   78 (315)
T PRK00066          7 NKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAG---D---Y-SDCKDADLVV   78 (315)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeC---C---H-HHhCCCCEEE
Confidence            58999998 9999999999999886  89999987654321 1112211111112222211   2   2 3478999999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCcc-EEEEec
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVK-RVVLTS  124 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~S  124 (305)
                      -+||....+  .....+.++.|....+.+++.+++. +.+ .++.+|
T Consensus        79 itag~~~k~--g~~R~dll~~N~~i~~~i~~~i~~~-~~~~~vivvs  122 (315)
T PRK00066         79 ITAGAPQKP--GETRLDLVEKNLKIFKSIVGEVMAS-GFDGIFLVAS  122 (315)
T ss_pred             EecCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEcc
Confidence            999985432  2344568899999999999999887 433 444444

>PRK04148 hypothetical protein; Provisional

Probab=97.79  E-value=0.00017  Score=52.84  Aligned_cols=94  Identities=18%  Similarity=0.159  Sum_probs=67.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      ++|+++| .| -|.+++..|.+.|++|++++.++........        ..+.++.+|+.+++.  ++-+++|.|+-+ 
T Consensus        18 ~kileIG-~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~--------~~~~~v~dDlf~p~~--~~y~~a~liysi-   84 (134)
T PRK04148         18 KKIVELG-IG-FYFKVAKKLKESGFDVIVIDINEKAVEKAKK--------LGLNAFVDDLFNPNL--EIYKNAKLIYSI-   84 (134)
T ss_pred             CEEEEEE-ec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHH--------hCCeEEECcCCCCCH--HHHhcCCEEEEe-
Confidence            4699999 58 8999999999999999999998763322211        157899999998762  455688998843 


Q ss_pred             cccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEecc
Q 039049           82 SPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSS  125 (305)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS  125 (305)
                               .++.++       ...+++.+++. ++.-+|..=|
T Consensus        85 ---------rpp~el-------~~~~~~la~~~-~~~~~i~~l~  111 (134)
T PRK04148         85 ---------RPPRDL-------QPFILELAKKI-NVPLIIKPLS  111 (134)
T ss_pred             ---------CCCHHH-------HHHHHHHHHHc-CCCEEEEcCC
Confidence                     222323       55677888888 8776665433

>PRK05442 malate dehydrogenase; Provisional

Probab=97.79  E-value=0.0004  Score=59.55  Aligned_cols=172  Identities=13%  Similarity=0.040  Sum_probs=98.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-------eEEEEEeCCCc--cc-chhhhhhcc-CccCceEEEEccCCCcchHHHH
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-------MVRTTVRDPED--LS-KVGFLWELN-GAEERLKIMKADLLMEGSFDEA   70 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-------~V~~~~r~~~~--~~-~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~   70 (305)
                      +||.|+|++|.+|++++..|+..|.       ++.++++++..  .. ....+.... ....++.+.       ....+.
T Consensus         5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~-------~~~y~~   77 (326)
T PRK05442          5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVIT-------DDPNVA   77 (326)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEe-------cChHHH
Confidence            5899999999999999999987663       68888875431  11 111111111 001122211       122355


Q ss_pred             hcCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCC-ccEEEEeccceeeeccCCCCCCcccCCCCCCCc
Q 039049           71 IQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKS-VKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDP  149 (305)
Q Consensus        71 ~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~  149 (305)
                      ++++|+||-+||.....  .....+.++.|....+.+.+.+.++.. -..+|.+|-.--...       ....+..+..|
T Consensus        78 ~~daDiVVitaG~~~k~--g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t-------~v~~k~s~g~p  148 (326)
T PRK05442         78 FKDADVALLVGARPRGP--GMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGNPANTNA-------LIAMKNAPDLP  148 (326)
T ss_pred             hCCCCEEEEeCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCchHHHH-------HHHHHHcCCCC
Confidence            77899999999975432  345666899999999999999988522 234555552110000       01111111111


Q ss_pred             ccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCC
Q 039049          150 DYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLL  194 (305)
Q Consensus       150 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~  194 (305)
                      .     +...|.+.+..-++-...++..+++...++...|+|...
T Consensus       149 ~-----~rViG~t~LDs~R~r~~la~~l~v~~~~V~~~vV~GeHG  188 (326)
T PRK05442        149 A-----ENFTAMTRLDHNRALSQLAAKAGVPVADIKKMTVWGNHS  188 (326)
T ss_pred             H-----HHEEeeeHHHHHHHHHHHHHHhCcChHHeEEeEEEECCc
Confidence            0     022333444445555555666788877777767778653

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.78  E-value=9e-05  Score=55.12  Aligned_cols=74  Identities=20%  Similarity=0.221  Sum_probs=52.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCe-EEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHM-VRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ++++|+|+ |..|+.++..|.+.|.+ |++++|+.++.......   . ....++++..     +++.+.+.++|+||++
T Consensus        13 ~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~---~-~~~~~~~~~~-----~~~~~~~~~~DivI~a   82 (135)
T PF01488_consen   13 KRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEE---F-GGVNIEAIPL-----EDLEEALQEADIVINA   82 (135)
T ss_dssp             SEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHH---H-TGCSEEEEEG-----GGHCHHHHTESEEEE-
T ss_pred             CEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHH---c-CccccceeeH-----HHHHHHHhhCCeEEEe
Confidence            68999997 99999999999999975 99999987654433221   1 1113344432     3345777889999999


Q ss_pred             ccccc
Q 039049           81 ASPVL   85 (305)
Q Consensus        81 a~~~~   85 (305)
                      .+...
T Consensus        83 T~~~~   87 (135)
T PF01488_consen   83 TPSGM   87 (135)
T ss_dssp             SSTTS
T ss_pred             cCCCC
Confidence            87755

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=97.76  E-value=0.00015  Score=62.56  Aligned_cols=91  Identities=16%  Similarity=0.238  Sum_probs=56.5

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCCeEE---EEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEE
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGHMVR---TTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFH   79 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~~V~---~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~   79 (305)
                      +|+|+||||++|+.|++.|.+++|.+.   .+.+..+......    .    .+......|+.     ...+.++|+||-
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~----~----~~~~~~~~~~~-----~~~~~~~D~v~~   67 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVT----F----KGKELEVNEAK-----IESFEGIDIALF   67 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeee----e----CCeeEEEEeCC-----hHHhcCCCEEEE
Confidence            689999999999999999999888654   3335433222211    0    02344444553     123478999998


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccc
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSC  126 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~  126 (305)
                      +++...                  +..+...+.+. |+ ++|=.||.
T Consensus        68 a~g~~~------------------s~~~a~~~~~~-G~-~VID~ss~   94 (339)
T TIGR01296        68 SAGGSV------------------SKEFAPKAAKC-GA-IVIDNTSA   94 (339)
T ss_pred             CCCHHH------------------HHHHHHHHHHC-CC-EEEECCHH
Confidence            887643                  33444455555 65 56666664

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.76  E-value=0.00014  Score=62.62  Aligned_cols=156  Identities=16%  Similarity=0.086  Sum_probs=79.7

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEE--EEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRT--TVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~--~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      |++|+|+||||++|..|++.|.+++|.+..  ..++.++.-+.  + ...    +   ...++.+.+.. . ++++|+||
T Consensus         4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~--l-~~~----~---~~l~~~~~~~~-~-~~~vD~vF   71 (336)
T PRK05671          4 PLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHS--V-PFA----G---KNLRVREVDSF-D-FSQVQLAF   71 (336)
T ss_pred             CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCe--e-ccC----C---cceEEeeCChH-H-hcCCCEEE
Confidence            467999999999999999999987764332  22333221110  0 000    1   12233332222 2 47899999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCC---CC--ccccc
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW---SD--PDYCK  153 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~---~~--~~~~~  153 (305)
                      -+.+...                  ...++..+.+. |+ ++|=.|+..-+.+.+     .-++|-..   ..  .....
T Consensus        72 la~p~~~------------------s~~~v~~~~~~-G~-~VIDlS~~fR~~~~p-----l~lPEvn~~~i~~~~~~~iI  126 (336)
T PRK05671         72 FAAGAAV------------------SRSFAEKARAA-GC-SVIDLSGALPSAQAP-----NVVPEVNAERLASLAAPFLV  126 (336)
T ss_pred             EcCCHHH------------------HHHHHHHHHHC-CC-eEEECchhhcCCCCC-----EEecccCHHHHccccCCCEE
Confidence            8765311                  23356666666 64 588888765332111     11222111   00  00111


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHcCCc-EEEEecCceecCCCCC
Q 039049          154 HYNLWYAYAKTIAEKEAWRIAKDCGID-MVVVNPSFVVGPLLAP  196 (305)
Q Consensus       154 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~-~~i~Rp~~v~G~~~~~  196 (305)
                      ...+.|..+-..+=.-+.   ...+++ +++--...+-|.+...
T Consensus       127 AnPgC~~t~~~laL~PL~---~~~~~~~v~v~t~~~vSGaG~~~  167 (336)
T PRK05671        127 SSPSASAVALAVALAPLK---GLLDIQRVQVTACLAVSSLGREG  167 (336)
T ss_pred             ECCCcHHHHHHHHHHHHH---HhcCCCEEEEEEeecCcccCccc
Confidence            112667776666544443   223433 5555566666766443

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.76  E-value=6.6e-05  Score=67.94  Aligned_cols=73  Identities=15%  Similarity=0.165  Sum_probs=58.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHH-hcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEA-IQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~Vi~~   80 (305)
                      |+|+|+|+ |.+|+++++.|.+.|++|+++.++++.......       ..++.++.+|..+.+.+.++ ++++|.||-+
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~-------~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~   72 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQD-------RLDVRTVVGNGSSPDVLREAGAEDADLLIAV   72 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh-------hcCEEEEEeCCCCHHHHHHcCCCcCCEEEEe
Confidence            57999997 999999999999999999999987764332211       12578899999998888887 7889998876


Q ss_pred             cc
Q 039049           81 AS   82 (305)
Q Consensus        81 a~   82 (305)
                      ..
T Consensus        73 ~~   74 (453)
T PRK09496         73 TD   74 (453)
T ss_pred             cC
Confidence            43

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=97.75  E-value=0.00066  Score=57.79  Aligned_cols=113  Identities=14%  Similarity=0.075  Sum_probs=74.6

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCC--eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGH--MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ||.|+|++|.||++++..|+..+.  ++.++++++... ..-.+....   .........  +.+++.+.++++|+||-+
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g-~a~DL~~~~---~~~~i~~~~--~~~~~~~~~~daDivvit   74 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAG-VAADLSHIP---TAASVKGFS--GEEGLENALKGADVVVIP   74 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcE-EEchhhcCC---cCceEEEec--CCCchHHHcCCCCEEEEe
Confidence            689999999999999999988874  788888766221 111121111   111111101  112345678899999999


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCcc-EEEEec
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVK-RVVLTS  124 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~S  124 (305)
                      ||....+  .....+.+..|....+.+.+.+.+. +.. .+|.+|
T Consensus        75 aG~~~~~--g~~R~dll~~N~~I~~~i~~~i~~~-~p~~iiivvs  116 (312)
T TIGR01772        75 AGVPRKP--GMTRDDLFNVNAGIVKDLVAAVAES-CPKAMILVIT  116 (312)
T ss_pred             CCCCCCC--CccHHHHHHHhHHHHHHHHHHHHHh-CCCeEEEEec
Confidence            9986433  3345568899999999999999888 433 344444

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=97.75  E-value=0.00025  Score=58.86  Aligned_cols=68  Identities=15%  Similarity=0.231  Sum_probs=46.8

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHc-CCeEEEEEeC-CCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDK-GHMVRTTVRD-PEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~-g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      |++|.|+|++|.+|+.+++.+.+. +.++.++... ++.....               -..++...+++.++++++|+||
T Consensus         1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~---------------~~~~i~~~~dl~~ll~~~DvVi   65 (257)
T PRK00048          1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ---------------GALGVAITDDLEAVLADADVLI   65 (257)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc---------------CCCCccccCCHHHhccCCCEEE
Confidence            689999999999999999998864 5787776543 3221110               1123334456777777899999


Q ss_pred             Eeccc
Q 039049           79 HTASP   83 (305)
Q Consensus        79 ~~a~~   83 (305)
                      +++.+
T Consensus        66 d~t~p   70 (257)
T PRK00048         66 DFTTP   70 (257)
T ss_pred             ECCCH
Confidence            88744

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.75  E-value=0.00011  Score=57.42  Aligned_cols=75  Identities=16%  Similarity=0.193  Sum_probs=46.7

Q ss_pred             CcEEEeCC----------------cchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCC--
Q 039049            2 PEYCVTGG----------------TGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLM--   63 (305)
Q Consensus         2 ~~ilItG~----------------~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--   63 (305)
                      ++||||+|                ||..|.+|++.+..+|++|+.+..... ...          ..+++.+...-..  
T Consensus         4 k~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~----------p~~~~~i~v~sa~em   72 (185)
T PF04127_consen    4 KKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP----------PPGVKVIRVESAEEM   72 (185)
T ss_dssp             -EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS---------------TTEEEEE-SSHHHH
T ss_pred             CEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc----------cccceEEEecchhhh
Confidence            67888866                599999999999999999999987642 110          1256666643211  


Q ss_pred             cchHHHHhcCCCEEEEeccccccC
Q 039049           64 EGSFDEAIQGVDGVFHTASPVLVP   87 (305)
Q Consensus        64 ~~~~~~~~~~~d~Vi~~a~~~~~~   87 (305)
                      .+.+.+.+++.|++||+||.....
T Consensus        73 ~~~~~~~~~~~Di~I~aAAVsDf~   96 (185)
T PF04127_consen   73 LEAVKELLPSADIIIMAAAVSDFR   96 (185)
T ss_dssp             HHHHHHHGGGGSEEEE-SB--SEE
T ss_pred             hhhhccccCcceeEEEecchhhee
Confidence            233445556789999999987754

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=97.75  E-value=0.00035  Score=50.38  Aligned_cols=69  Identities=25%  Similarity=0.343  Sum_probs=52.8

Q ss_pred             EEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHH-hcCCCEEEEec
Q 039049            4 YCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEA-IQGVDGVFHTA   81 (305)
Q Consensus         4 ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~Vi~~a   81 (305)
                      |+|+|. |-+|..+++.|.+.+.+|+++.++++......        ...+.++.+|..+++.++++ +++++.||-+.
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~--------~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~   70 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELR--------EEGVEVIYGDATDPEVLERAGIEKADAVVILT   70 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHH--------HTTSEEEES-TTSHHHHHHTTGGCESEEEEES
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHH--------hcccccccccchhhhHHhhcCccccCEEEEcc
Confidence            678886 89999999999997779999998876433221        11578999999999988886 46889888664

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=97.74  E-value=0.00015  Score=53.01  Aligned_cols=98  Identities=17%  Similarity=0.259  Sum_probs=55.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHH-cCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLD-KGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      |||.|.|++|.+|+.+++.+.+ .++++.+...+......-........    ..  .....-.++++++++++|+||.+
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~----~~--~~~~~v~~~l~~~~~~~DVvIDf   74 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAG----IG--PLGVPVTDDLEELLEEADVVIDF   74 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCT----SS--T-SSBEBS-HHHHTTH-SEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhC----cC--CcccccchhHHHhcccCCEEEEc
Confidence            5899999999999999999998 67886666544331111011101100    00  11111235678888889999988


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEecc
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSS  125 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS  125 (305)
                      ..+                  ..+...++.|.++ +++ +|.-+|
T Consensus        75 T~p------------------~~~~~~~~~~~~~-g~~-~ViGTT   99 (124)
T PF01113_consen   75 TNP------------------DAVYDNLEYALKH-GVP-LVIGTT   99 (124)
T ss_dssp             S-H------------------HHHHHHHHHHHHH-T-E-EEEE-S
T ss_pred             CCh------------------HHhHHHHHHHHhC-CCC-EEEECC
Confidence            522                  1255667778887 654 444333

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=97.72  E-value=0.00067  Score=57.75  Aligned_cols=112  Identities=16%  Similarity=0.164  Sum_probs=74.6

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCC--eEEEEEeCCCccc-chhhhhhccCcc--CceEEEEccCCCcchHHHHhcCCCEE
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGH--MVRTTVRDPEDLS-KVGFLWELNGAE--ERLKIMKADLLMEGSFDEAIQGVDGV   77 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~-~~~~~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~d~V   77 (305)
                      ||.|+|+ |.+|+.++..|+..+.  ++.+++.+.+... ....+.......  .++....+|       -+.++++|+|
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~-------y~~~~~aDiv   72 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD-------YDDCADADII   72 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC-------HHHhCCCCEE
Confidence            6899998 9999999999998874  7999988765432 122222211111  133333333       2457789999


Q ss_pred             EEeccccccCCCCch-hhhhhhhhHHHHHHHHHHHHhcCCccEEEEec
Q 039049           78 FHTASPVLVPYDNNI-QATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS  124 (305)
Q Consensus        78 i~~a~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  124 (305)
                      |-+||....+ .++. ..+.+..|....+.+.+.+.++ +..-++.+-
T Consensus        73 vitaG~~~kp-g~tr~R~dll~~N~~I~~~i~~~i~~~-~p~~i~ivv  118 (307)
T cd05290          73 VITAGPSIDP-GNTDDRLDLAQTNAKIIREIMGNITKV-TKEAVIILI  118 (307)
T ss_pred             EECCCCCCCC-CCCchHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEe
Confidence            9999985433 2222 4668899999999999999988 544444433

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=97.69  E-value=0.00022  Score=61.81  Aligned_cols=101  Identities=15%  Similarity=0.147  Sum_probs=58.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHc-CCeEEEE-EeCCCcccchhhhhhccCccCceEEE-EccCCCcchHHHHhcCCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDK-GHMVRTT-VRDPEDLSKVGFLWELNGAEERLKIM-KADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~-~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      ++|.|+||||++|..+++.|++. +.++..+ .++.+........  .+    .+... ..++.+. +..++++++|+||
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~--~~----~l~~~~~~~~~~~-~~~~~~~~~DvVf   73 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEV--HP----HLRGLVDLNLEPI-DEEEIAEDADVVF   73 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHh--Cc----cccccCCceeecC-CHHHhhcCCCEEE
Confidence            57999999999999999999976 4677755 4332211111100  00    11111 1112211 2334445899999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceee
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSI  129 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~  129 (305)
                      -|.....                  ...+...+.+. | +++|=.|+..-+
T Consensus        74 ~alP~~~------------------s~~~~~~~~~~-G-~~VIDlS~~fR~  104 (346)
T TIGR01850        74 LALPHGV------------------SAELAPELLAA-G-VKVIDLSADFRL  104 (346)
T ss_pred             ECCCchH------------------HHHHHHHHHhC-C-CEEEeCChhhhc
Confidence            8765432                  34555566566 6 689988986533

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.68  E-value=0.00078  Score=58.18  Aligned_cols=109  Identities=17%  Similarity=0.226  Sum_probs=68.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCccc------------------chhhh-hhccCccC--ceEEEEc
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLS------------------KVGFL-WELNGAEE--RLKIMKA   59 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~------------------~~~~~-~~~~~~~~--~~~~~~~   59 (305)
                      .+|+|+|+ |.+|+++++.|+..|. ++++++.+.-..+                  +.... ..+...++  .++.+..
T Consensus        25 ~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~~~  103 (339)
T PRK07688         25 KHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAIVQ  103 (339)
T ss_pred             CcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEEec
Confidence            57999997 9999999999999997 8999887631111                  00000 01111122  3445555


Q ss_pred             cCCCcchHHHHhcCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeec
Q 039049           60 DLLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRY  131 (305)
Q Consensus        60 D~~d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~  131 (305)
                      ++. .+.+.++++++|+||.+...                 ...-..+.+.|.+. ++ .+|+.++...++.
T Consensus       104 ~~~-~~~~~~~~~~~DlVid~~Dn-----------------~~~r~~ln~~~~~~-~i-P~i~~~~~g~~G~  155 (339)
T PRK07688        104 DVT-AEELEELVTGVDLIIDATDN-----------------FETRFIVNDAAQKY-GI-PWIYGACVGSYGL  155 (339)
T ss_pred             cCC-HHHHHHHHcCCCEEEEcCCC-----------------HHHHHHHHHHHHHh-CC-CEEEEeeeeeeeE
Confidence            654 45567778899999987322                 11133566677777 64 5888877665553

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=97.67  E-value=0.0079  Score=45.10  Aligned_cols=185  Identities=12%  Similarity=0.104  Sum_probs=98.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcc-------hHHHHhc--
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG-------SFDEAIQ--   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~-------~~~~~~~--   72 (305)
                      .+|+|-||-|-+|+++++.|.+++|-|.-++.........            --.+..|-.-.+       .+.+.+.  
T Consensus         4 grVivYGGkGALGSacv~~FkannywV~siDl~eNe~Ad~------------sI~V~~~~swtEQe~~v~~~vg~sL~ge   71 (236)
T KOG4022|consen    4 GRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQADS------------SILVDGNKSWTEQEQSVLEQVGSSLQGE   71 (236)
T ss_pred             ceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccccc------------eEEecCCcchhHHHHHHHHHHHHhhccc
Confidence            4799999999999999999999999998887665422210            112223222112       2222332  


Q ss_pred             CCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHh------cCCccEEEEec-cceeeeccCCCCCCcccCCCC
Q 039049           73 GVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKK------AKSVKRVVLTS-SCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~------~~~~~~~v~~S-S~~~~~~~~~~~~~~~~~E~~  145 (305)
                      ++|.||..||--... +........+..+..-+.++..+..      +=...-++-+. .-.+.++.+.           
T Consensus        72 kvDav~CVAGGWAGG-nAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~gTPg-----------  139 (236)
T KOG4022|consen   72 KVDAVFCVAGGWAGG-NAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGGTPG-----------  139 (236)
T ss_pred             ccceEEEeeccccCC-CcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCCCCc-----------
Confidence            689999988754432 2222222233333333333332221      10111233332 2222222221           


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHH-cCCcE----EEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCC-
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD-CGIDM----VVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNT-  219 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~~~~~----~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  219 (305)
                        .        -.||.+|.+..++.+.++.+ .|+|-    +.+-|-..-.|....+                  .|+. 
T Consensus       140 --M--------IGYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKw------------------MP~AD  191 (236)
T KOG4022|consen  140 --M--------IGYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKW------------------MPNAD  191 (236)
T ss_pred             --c--------cchhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCcccccc------------------CCCCc
Confidence              1        44999999999999888644 45543    2333333333322111                  1222 


Q ss_pred             CccceeHHHHHHHHHHhhc
Q 039049          220 TVGFVHIDDVVGAHILAME  238 (305)
Q Consensus       220 ~~~~i~v~D~a~~~~~~~~  238 (305)
                      .-.|.....++..++....
T Consensus       192 fssWTPL~fi~e~flkWtt  210 (236)
T KOG4022|consen  192 FSSWTPLSFISEHFLKWTT  210 (236)
T ss_pred             ccCcccHHHHHHHHHHHhc
Confidence            5678888888888877654

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=97.64  E-value=0.00085  Score=57.27  Aligned_cols=114  Identities=14%  Similarity=0.054  Sum_probs=73.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC--eEEEEEeCCCcccc-hhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH--MVRTTVRDPEDLSK-VGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      +||.|+|+ |.+|..++..|+..|.  ++.+++++.+.... ...+...........+...     .+++ .++++|+||
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~-----~dy~-~~~~adivv   76 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD-----KDYS-VTANSKVVI   76 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC-----CCHH-HhCCCCEEE
Confidence            58999996 9999999999988874  78999887653321 1122221111111122211     1233 378999999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEec
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS  124 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  124 (305)
                      -+||....+  .....+.++.|....+.+.+.+++...-..++.+|
T Consensus        77 itaG~~~k~--g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs  120 (312)
T cd05293          77 VTAGARQNE--GESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVS  120 (312)
T ss_pred             ECCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEcc
Confidence            999986532  23445688999999999999998883222455555

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=97.63  E-value=0.00017  Score=56.62  Aligned_cols=70  Identities=21%  Similarity=0.095  Sum_probs=46.9

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ||+|.|.| +|-||..|++.|.+.||+|+..+|+.++..........+    .        -.......+.+..|+||-.
T Consensus         1 m~~~~i~G-tGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~----~--------i~~~~~~dA~~~aDVVvLA   67 (211)
T COG2085           1 MMIIAIIG-TGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGP----L--------ITGGSNEDAAALADVVVLA   67 (211)
T ss_pred             CcEEEEec-cChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhcc----c--------cccCChHHHHhcCCEEEEe
Confidence            77777766 799999999999999999999977766433322111111    1        1123355667778999966


Q ss_pred             ccc
Q 039049           81 ASP   83 (305)
Q Consensus        81 a~~   83 (305)
                      ...
T Consensus        68 VP~   70 (211)
T COG2085          68 VPF   70 (211)
T ss_pred             ccH
Confidence            543

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=97.62  E-value=0.00065  Score=60.30  Aligned_cols=113  Identities=19%  Similarity=0.116  Sum_probs=74.8

Q ss_pred             cEEEeCCcchHHHHHHHHHHHc-------CC--eEEEEEeCCCcccch-hhhhh-ccCccCceEEEEccCCCcchHHHHh
Q 039049            3 EYCVTGGTGFIAAHLVKALLDK-------GH--MVRTTVRDPEDLSKV-GFLWE-LNGAEERLKIMKADLLMEGSFDEAI   71 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~-------g~--~V~~~~r~~~~~~~~-~~~~~-~~~~~~~~~~~~~D~~d~~~~~~~~   71 (305)
                      ||.|+|++|.+|.+++-.|+..       |.  ++..++++.+..... -.+.. ......++.+...   +    -+.+
T Consensus       102 KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~---~----ye~~  174 (444)
T PLN00112        102 NVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGID---P----YEVF  174 (444)
T ss_pred             EEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecC---C----HHHh
Confidence            7999999999999999999987       54  788888877654321 11111 1011112211111   2    2447


Q ss_pred             cCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHh-cCCccEEEEec
Q 039049           72 QGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKK-AKSVKRVVLTS  124 (305)
Q Consensus        72 ~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~~v~~S  124 (305)
                      +++|+||-.||.....  .....+.++.|+...+.+.+.+.+ ++.-.++|.+|
T Consensus       175 kdaDiVVitAG~prkp--G~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVs  226 (444)
T PLN00112        175 QDAEWALLIGAKPRGP--GMERADLLDINGQIFAEQGKALNEVASRNVKVIVVG  226 (444)
T ss_pred             CcCCEEEECCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcC
Confidence            7899999999985432  334566899999999999999988 52223455555

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=97.62  E-value=0.0013  Score=55.44  Aligned_cols=115  Identities=19%  Similarity=0.108  Sum_probs=74.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC--CeEEEEEeCCCcccc-hhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG--HMVRTTVRDPEDLSK-VGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      +||.|+|+ |.||+.++-.|+.++  .++.++++....... ...+.........-..+.+| .+    -+.++++|+|+
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~----y~~~~~aDiVv   74 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GD----YEDLKGADIVV   74 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CC----hhhhcCCCEEE
Confidence            57999999 999999999998776  489999888443221 11121111111111222222 11    24477899999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEecc
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSS  125 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS  125 (305)
                      -.||...-+  .....+.++.|......+.+...+. +.+-++.+-|
T Consensus        75 itAG~prKp--GmtR~DLl~~Na~I~~~i~~~i~~~-~~d~ivlVvt  118 (313)
T COG0039          75 ITAGVPRKP--GMTRLDLLEKNAKIVKDIAKAIAKY-APDAIVLVVT  118 (313)
T ss_pred             EeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhh-CCCeEEEEec
Confidence            999876643  2344558899999999999999887 5444444433

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=97.60  E-value=0.0013  Score=56.45  Aligned_cols=115  Identities=19%  Similarity=0.071  Sum_probs=74.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhhhhhccC---ccCceEEEEccCCCcchHHHHhcCCCEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGFLWELNG---AEERLKIMKADLLMEGSFDEAIQGVDGV   77 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~d~~~~~~~~~~~d~V   77 (305)
                      +||.|+|+ |.+|+.++..++..|. +|.+++++++... ...++....   ......+...  .|   + +.++++|+|
T Consensus         7 ~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~-~~~ld~~~~~~~~~~~~~I~~~--~d---~-~~l~~aDiV   78 (321)
T PTZ00082          7 RKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQ-GKALDISHSNVIAGSNSKVIGT--NN---Y-EDIAGSDVV   78 (321)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhh-HHHHHHHhhhhccCCCeEEEEC--CC---H-HHhCCCCEE
Confidence            58999995 9999999999998895 8999988876432 111111110   0111222210  12   3 357899999


Q ss_pred             EEeccccccCCCCc---hhhhhhhhhHHHHHHHHHHHHhcCCcc-EEEEecc
Q 039049           78 FHTASPVLVPYDNN---IQATLIDPCIKGTLNVLSSCKKAKSVK-RVVLTSS  125 (305)
Q Consensus        78 i~~a~~~~~~~~~~---~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~SS  125 (305)
                      |.+|+........+   ...+.+..|+...+.+.+.+.+. ..+ .++.+|-
T Consensus        79 I~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~-~p~a~~iv~sN  129 (321)
T PTZ00082         79 IVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKY-CPNAFVIVITN  129 (321)
T ss_pred             EECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecC
Confidence            99998865321100   34557788999999999998887 434 5666653

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.57  E-value=0.00032  Score=60.98  Aligned_cols=36  Identities=17%  Similarity=0.255  Sum_probs=30.1

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPE   36 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~   36 (305)
                      |++|+|+||||++|++|++.|++... ++.++.++.+
T Consensus         3 ~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~   39 (349)
T PRK08664          3 KLKVGILGATGMVGQRFVQLLANHPWFEVTALAASER   39 (349)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChh
Confidence            36899999999999999999987654 8888866653

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=97.57  E-value=0.00084  Score=57.21  Aligned_cols=117  Identities=15%  Similarity=0.039  Sum_probs=73.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      |||.|+|+ |++|..++..|+..|+ +|+++++....... ..++.. +.. -.......+.-..++.. ++++|+||-+
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g-~a~d~~-~~~-~~~~~~~~i~~t~d~~~-~~~aDiVIit   76 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQG-KALDMY-EAS-PVGGFDTKVTGTNNYAD-TANSDIVVIT   76 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHH-HHHhhh-hhh-hccCCCcEEEecCCHHH-hCCCCEEEEc
Confidence            68999996 9999999999999886 89999886543221 111110 000 00000111211123444 6789999999


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEecc
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSS  125 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS  125 (305)
                      ++.....  .....+.+..|+.....+++.+.+...-..+|.+|-
T Consensus        77 ag~p~~~--~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tN  119 (305)
T TIGR01763        77 AGLPRKP--GMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSN  119 (305)
T ss_pred             CCCCCCc--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            9975532  224455788999999999999887732234555553

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PLN02602 lactate dehydrogenase

Probab=97.55  E-value=0.0014  Score=56.83  Aligned_cols=113  Identities=16%  Similarity=0.165  Sum_probs=73.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC--eEEEEEeCCCcccc-hhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH--MVRTTVRDPEDLSK-VGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      +||.|+|+ |.+|++++..|+..|.  ++.+++.+.+.... ...+.......... -+.++ .|   ++ .++++|+||
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~-~i~~~-~d---y~-~~~daDiVV  110 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRT-KILAS-TD---YA-VTAGSDLCI  110 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCC-EEEeC-CC---HH-HhCCCCEEE
Confidence            58999996 9999999999998874  79999887653321 11222211111122 22211 12   22 377999999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCcc-EEEEec
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVK-RVVLTS  124 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~S  124 (305)
                      -+||.....  .....+.+..|+...+.+.+.++++ +.+ .+|.+|
T Consensus       111 itAG~~~k~--g~tR~dll~~N~~I~~~i~~~I~~~-~p~~ivivvt  154 (350)
T PLN02602        111 VTAGARQIP--GESRLNLLQRNVALFRKIIPELAKY-SPDTILLIVS  154 (350)
T ss_pred             ECCCCCCCc--CCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEec
Confidence            999985432  2344568899999999999999887 433 455544

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.54  E-value=0.00076  Score=61.08  Aligned_cols=73  Identities=25%  Similarity=0.331  Sum_probs=56.5

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHH-hcCCCEEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEA-IQGVDGVFH   79 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~Vi~   79 (305)
                      +++|+|+|+ |.+|+++++.|.+.|++|+++.++++......   .   ...++.++.+|..+.+.+.++ ++++|.||-
T Consensus       231 ~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~---~---~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~  303 (453)
T PRK09496        231 VKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELA---E---ELPNTLVLHGDGTDQELLEEEGIDEADAFIA  303 (453)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHH---H---HCCCCeEEECCCCCHHHHHhcCCccCCEEEE
Confidence            478999997 99999999999999999999988876332211   1   123578899999998888664 468899884


Q ss_pred             e
Q 039049           80 T   80 (305)
Q Consensus        80 ~   80 (305)
                      +
T Consensus       304 ~  304 (453)
T PRK09496        304 L  304 (453)
T ss_pred             C
Confidence            4

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.51  E-value=0.001  Score=55.62  Aligned_cols=114  Identities=18%  Similarity=0.098  Sum_probs=74.8

Q ss_pred             EEEeCCcchHHHHHHHHHHHcC----CeEEEEEeCCCcccchh-hhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            4 YCVTGGTGFIAAHLVKALLDKG----HMVRTTVRDPEDLSKVG-FLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         4 ilItG~~G~iG~~l~~~l~~~g----~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      |.|+||.|.+|..++..|+..|    .+|.+++++++...... .+.......     ....+.-.+++.+.++++|+||
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~-----~~~~i~~~~d~~~~~~~aDiVv   75 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL-----ADIKVSITDDPYEAFKDADVVI   75 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc-----cCcEEEECCchHHHhCCCCEEE
Confidence            5799999999999999999988    68999998775443221 121111100     0112221233567788999999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEec
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS  124 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  124 (305)
                      .+++.....  ..........|+...+.+.+.+++...-..++.+|
T Consensus        76 ~t~~~~~~~--g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t  119 (263)
T cd00650          76 ITAGVGRKP--GMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVS  119 (263)
T ss_pred             ECCCCCCCc--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            999876543  22344577889999999999998873222344443

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.50  E-value=0.0012  Score=56.93  Aligned_cols=107  Identities=18%  Similarity=0.216  Sum_probs=66.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccc------------------h----hhhhhccCccCceEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSK------------------V----GFLWELNGAEERLKIMK   58 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~------------------~----~~~~~~~~~~~~~~~~~   58 (305)
                      ++|+|+|+ |-+|+++++.|+..|. ++++++++.-..+.                  .    ..+..... .-.++.+.
T Consensus        25 ~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp-~v~i~~~~  102 (338)
T PRK12475         25 KHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINS-EVEIVPVV  102 (338)
T ss_pred             CcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCC-CcEEEEEe
Confidence            57999996 8899999999999997 78888876421110                  0    11111111 12355566


Q ss_pred             ccCCCcchHHHHhcCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeee
Q 039049           59 ADLLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIR  130 (305)
Q Consensus        59 ~D~~d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~  130 (305)
                      .|+. .+.+.++++++|+||.+...         ..        .-..+-+.|.+. ++ .+|+.+..+.++
T Consensus       103 ~~~~-~~~~~~~~~~~DlVid~~D~---------~~--------~r~~in~~~~~~-~i-p~i~~~~~g~~G  154 (338)
T PRK12475        103 TDVT-VEELEELVKEVDLIIDATDN---------FD--------TRLLINDLSQKY-NI-PWIYGGCVGSYG  154 (338)
T ss_pred             ccCC-HHHHHHHhcCCCEEEEcCCC---------HH--------HHHHHHHHHHHc-CC-CEEEEEecccEE
Confidence            6664 45677888999999987522         11        122344567776 75 477776655444

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.49  E-value=0.00061  Score=61.65  Aligned_cols=74  Identities=26%  Similarity=0.177  Sum_probs=52.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      ++|+|+|+.+ +|..+++.|++.|++|++.+++..... ......+.  ..++.++.+|..+     ....++|+||+++
T Consensus         6 k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~-~~~~~~l~--~~~~~~~~~~~~~-----~~~~~~d~vv~~~   76 (450)
T PRK14106          6 KKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQL-KEALEELG--ELGIELVLGEYPE-----EFLEGVDLVVVSP   76 (450)
T ss_pred             CEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHH-HHHHHHHH--hcCCEEEeCCcch-----hHhhcCCEEEECC
Confidence            6899999866 999999999999999999988652211 11111111  1146677777765     3356789999998


Q ss_pred             ccc
Q 039049           82 SPV   84 (305)
Q Consensus        82 ~~~   84 (305)
                      +..
T Consensus        77 g~~   79 (450)
T PRK14106         77 GVP   79 (450)
T ss_pred             CCC
Confidence            864

>PTZ00117 malate dehydrogenase; Provisional

Probab=97.48  E-value=0.0014  Score=56.19  Aligned_cols=115  Identities=17%  Similarity=0.030  Sum_probs=73.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC-CeEEEEEeCCCcccchh-hhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG-HMVRTTVRDPEDLSKVG-FLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~   79 (305)
                      +||.|+|| |.+|+.++..|+..| .++.+++++.+...... .+.........-..+.    ...+++ .++++|+||.
T Consensus         6 ~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~----~~~d~~-~l~~ADiVVi   79 (319)
T PTZ00117          6 KKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINIL----GTNNYE-DIKDSDVVVI   79 (319)
T ss_pred             cEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEE----eCCCHH-HhCCCCEEEE
Confidence            58999997 999999999998888 68999988775433111 1111100000001111    112344 6789999999


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccE-EEEecc
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKR-VVLTSS  125 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~v~~SS  125 (305)
                      +++.....  .....+.+..|......+.+.+.+. ..+. +|.+|-
T Consensus        80 tag~~~~~--g~~r~dll~~n~~i~~~i~~~i~~~-~p~a~vivvsN  123 (319)
T PTZ00117         80 TAGVQRKE--EMTREDLLTINGKIMKSVAESVKKY-CPNAFVICVTN  123 (319)
T ss_pred             CCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecC
Confidence            99875433  2234557888998899999988887 4343 566553

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=97.46  E-value=0.00055  Score=55.48  Aligned_cols=37  Identities=30%  Similarity=0.308  Sum_probs=33.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcc
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDL   38 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~   38 (305)
                      |+|.|+||+|.+|+.++..|++.|++|.+.+|++++.
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~   37 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKA   37 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHH
Confidence            5799999999999999999999999999999987644

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=97.42  E-value=0.00046  Score=66.50  Aligned_cols=165  Identities=16%  Similarity=0.174  Sum_probs=106.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCe-EEEEEeCCCcccchhhhhhccCccCceEE--EEccCCCcchHHHHhc------
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHM-VRTTVRDPEDLSKVGFLWELNGAEERLKI--MKADLLMEGSFDEAIQ------   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~D~~d~~~~~~~~~------   72 (305)
                      |.++|+||-|..|.+|++-|.++|.+ ++..+|+.-+.--....... +..-+++.  ---|++..+.-.++++      
T Consensus      1769 ksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrr-Wr~~GVqV~vsT~nitt~~ga~~Li~~s~kl~ 1847 (2376)
T KOG1202|consen 1769 KSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRR-WRRRGVQVQVSTSNITTAEGARGLIEESNKLG 1847 (2376)
T ss_pred             ceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHH-HHhcCeEEEEecccchhhhhHHHHHHHhhhcc
Confidence            57899999999999999999999975 55666765432211111111 11113332  2245555555555554      


Q ss_pred             CCCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           73 GVDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKAK-SVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      -+--|||+|+......    ...+....-+..+.+|.+|=...++.. -.+.||.+||.+--.++.+.            
T Consensus      1848 ~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN~GQ------------ 1915 (2376)
T KOG1202|consen 1848 PVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGNAGQ------------ 1915 (2376)
T ss_pred             cccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCCCcc------------
Confidence            3578999999876543    233445556667788888887777763 35689999997632222221            


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCce
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFV  189 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v  189 (305)
                               +.||.+-..+|+++.+. +..|+|-+.+.-|.|
T Consensus      1916 ---------tNYG~aNS~MERiceqR-r~~GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1916 ---------TNYGLANSAMERICEQR-RHEGFPGTAIQWGAI 1947 (2376)
T ss_pred             ---------cccchhhHHHHHHHHHh-hhcCCCcceeeeecc
Confidence                     66999999999999765 345777776665543

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=97.41  E-value=0.0028  Score=52.05  Aligned_cols=95  Identities=18%  Similarity=0.237  Sum_probs=71.1

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVF   78 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi   78 (305)
                      |++|+|+|||+ =|+.|++.|.+.|++|++-+-..-....          ...+....+-+.+.+.+.+.+.  +++.||
T Consensus         2 ~~~IlvlgGT~-egr~la~~L~~~g~~v~~Svat~~g~~~----------~~~~~v~~G~l~~~~~l~~~l~~~~i~~VI   70 (248)
T PRK08057          2 MPRILLLGGTS-EARALARALAAAGVDIVLSLAGRTGGPA----------DLPGPVRVGGFGGAEGLAAYLREEGIDLVI   70 (248)
T ss_pred             CceEEEEechH-HHHHHHHHHHhCCCeEEEEEccCCCCcc----------cCCceEEECCCCCHHHHHHHHHHCCCCEEE
Confidence            68899999976 6899999999999988877654432110          1256777788878899999886  799999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEE
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVL  122 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~  122 (305)
                      ...-+..               ...+.++.++|++. +++.+=|
T Consensus        71 DATHPfA---------------~~is~~a~~ac~~~-~ipyiR~   98 (248)
T PRK08057         71 DATHPYA---------------AQISANAAAACRAL-GIPYLRL   98 (248)
T ss_pred             ECCCccH---------------HHHHHHHHHHHHHh-CCcEEEE
Confidence            8865532               23377889999998 8875544

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.35  E-value=0.0042  Score=46.13  Aligned_cols=106  Identities=14%  Similarity=0.191  Sum_probs=65.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhh----------------hhh-ccCcc--CceEEEEccC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGF----------------LWE-LNGAE--ERLKIMKADL   61 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~----------------~~~-~~~~~--~~~~~~~~D~   61 (305)
                      ++|+|.|+ |-+|+.+++.|+..|. ++++++.+.-.......                +.. +....  -+++.+..++
T Consensus         3 ~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~   81 (135)
T PF00899_consen    3 KRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI   81 (135)
T ss_dssp             -EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC
T ss_pred             CEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc
Confidence            58999996 9999999999999996 78888765321111100                000 01111  2455555565


Q ss_pred             CCcchHHHHhcCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEecccee
Q 039049           62 LMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSS  128 (305)
Q Consensus        62 ~d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~  128 (305)
                       +.+...++++++|+||.+....                 .....+.+.|++. +. .+|+.++.+.
T Consensus        82 -~~~~~~~~~~~~d~vi~~~d~~-----------------~~~~~l~~~~~~~-~~-p~i~~~~~g~  128 (135)
T PF00899_consen   82 -DEENIEELLKDYDIVIDCVDSL-----------------AARLLLNEICREY-GI-PFIDAGVNGF  128 (135)
T ss_dssp             -SHHHHHHHHHTSSEEEEESSSH-----------------HHHHHHHHHHHHT-T--EEEEEEEETT
T ss_pred             -ccccccccccCCCEEEEecCCH-----------------HHHHHHHHHHHHc-CC-CEEEEEeecC
Confidence             4456778888999999884331                 1133566677777 64 6887776543

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=97.35  E-value=0.00012  Score=57.52  Aligned_cols=83  Identities=25%  Similarity=0.221  Sum_probs=43.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEE-----E-EccCCCcchHHHHhcCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKI-----M-KADLLMEGSFDEAIQGVD   75 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-----~-~~D~~d~~~~~~~~~~~d   75 (305)
                      |||.|+| .||+|..++..|++.|++|++++.+++.......-.. +-..+++.-     . .+.+.-..++..++.++|
T Consensus         1 M~I~ViG-lGyvGl~~A~~lA~~G~~V~g~D~~~~~v~~l~~g~~-p~~E~~l~~ll~~~~~~~~l~~t~~~~~ai~~ad   78 (185)
T PF03721_consen    1 MKIAVIG-LGYVGLPLAAALAEKGHQVIGVDIDEEKVEALNNGEL-PIYEPGLDELLKENVSAGRLRATTDIEEAIKDAD   78 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HHHHHHHHTTSS-SS-CTTHHHHHHHHHHTTSEEEESEHHHHHHH-S
T ss_pred             CEEEEEC-CCcchHHHHHHHHhCCCEEEEEeCChHHHHHHhhccc-cccccchhhhhccccccccchhhhhhhhhhhccc
Confidence            7899998 6999999999999999999999887653322211000 000000000     0 011222234556667789


Q ss_pred             EEEEecccccc
Q 039049           76 GVFHTASPVLV   86 (305)
Q Consensus        76 ~Vi~~a~~~~~   86 (305)
                      ++|-|.+....
T Consensus        79 v~~I~VpTP~~   89 (185)
T PF03721_consen   79 VVFICVPTPSD   89 (185)
T ss_dssp             EEEE----EBE
T ss_pred             eEEEecCCCcc
Confidence            99999886553

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=97.34  E-value=0.0002  Score=55.12  Aligned_cols=66  Identities=21%  Similarity=0.196  Sum_probs=44.9

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ||+|.++| .|-+|+.+++.|++.|++|++.+|++++.......        +       ..-.++..++.+++|+||-+
T Consensus         1 m~~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~--------g-------~~~~~s~~e~~~~~dvvi~~   64 (163)
T PF03446_consen    1 MMKIGFIG-LGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEA--------G-------AEVADSPAEAAEQADVVILC   64 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHT--------T-------EEEESSHHHHHHHBSEEEE-
T ss_pred             CCEEEEEc-hHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHh--------h-------hhhhhhhhhHhhcccceEee
Confidence            89999999 59999999999999999999999987644332211        1       11123455666677888876


Q ss_pred             cc
Q 039049           81 AS   82 (305)
Q Consensus        81 a~   82 (305)
                      ..
T Consensus        65 v~   66 (163)
T PF03446_consen   65 VP   66 (163)
T ss_dssp             SS
T ss_pred             cc
Confidence            43

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=97.31  E-value=0.0014  Score=57.56  Aligned_cols=34  Identities=26%  Similarity=0.382  Sum_probs=31.7

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRD   34 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~   34 (305)
                      +++|.|+||.|.+|..+++.|.+.|++|++.+|+
T Consensus        98 ~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~  131 (374)
T PRK11199         98 LRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQD  131 (374)
T ss_pred             cceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCC
Confidence            4789999999999999999999999999999875

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.30  E-value=0.0011  Score=57.34  Aligned_cols=96  Identities=10%  Similarity=0.035  Sum_probs=55.3

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHH-cCCe---EEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLD-KGHM---VRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDG   76 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~-~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   76 (305)
                      |++|.|.||||++|+.+++.|++ ....   +..++.+.... ..   ..+.    +-.....++.+.+.    +.++|+
T Consensus         1 m~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg~-~~---~~f~----g~~~~v~~~~~~~~----~~~~Di   68 (369)
T PRK06598          1 MKKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAGG-AA---PSFG----GKEGTLQDAFDIDA----LKKLDI   68 (369)
T ss_pred             CeEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhCC-cc---cccC----CCcceEEecCChhH----hcCCCE
Confidence            88999999999999999995554 4555   56554432111 10   0111    11122223333222    467999


Q ss_pred             EEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCcc-EEEEeccce
Q 039049           77 VFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVK-RVVLTSSCS  127 (305)
Q Consensus        77 Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~SS~~  127 (305)
                      ||-+++...                  +..+...+.++ |++ .+|=.||..
T Consensus        69 vf~a~~~~~------------------s~~~~~~~~~a-G~~~~VID~Ss~f  101 (369)
T PRK06598         69 IITCQGGDY------------------TNEVYPKLRAA-GWQGYWIDAASTL  101 (369)
T ss_pred             EEECCCHHH------------------HHHHHHHHHhC-CCCeEEEECChHH
Confidence            998875532                  44555566666 753 466666654

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=97.30  E-value=0.0023  Score=55.38  Aligned_cols=93  Identities=20%  Similarity=0.250  Sum_probs=53.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCe---EEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHM---VRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      ++|+|+||||++|+.|++.|.+++|.   +..+............    .    +......++. .    ..++++|+||
T Consensus         8 ~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~----~----~~~~~v~~~~-~----~~~~~~D~vf   74 (344)
T PLN02383          8 PSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTF----E----GRDYTVEELT-E----DSFDGVDIAL   74 (344)
T ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeee----c----CceeEEEeCC-H----HHHcCCCEEE
Confidence            58999999999999999999988773   3333322111111000    0    1122222222 1    2346899999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccce
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCS  127 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  127 (305)
                      -+++...                  ...+...+.+. |+ ++|=.|+..
T Consensus        75 ~a~p~~~------------------s~~~~~~~~~~-g~-~VIDlS~~f  103 (344)
T PLN02383         75 FSAGGSI------------------SKKFGPIAVDK-GA-VVVDNSSAF  103 (344)
T ss_pred             ECCCcHH------------------HHHHHHHHHhC-CC-EEEECCchh
Confidence            7775532                  33444445455 63 688888765

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=97.30  E-value=0.00092  Score=58.81  Aligned_cols=67  Identities=21%  Similarity=0.200  Sum_probs=53.3

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      |++|+|+|| |.+|+.++..+.+.|++|++++.++.....  ..        --.++.+|..|.+.+.++.+.+|+|.
T Consensus         2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~--~~--------ad~~~~~~~~D~~~l~~~a~~~dvit   68 (372)
T PRK06019          2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAA--QV--------ADEVIVADYDDVAALRELAEQCDVIT   68 (372)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchh--Hh--------CceEEecCCCCHHHHHHHHhcCCEEE
Confidence            789999998 899999999999999999999876543211  11        11456688999999999999999875

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=97.30  E-value=0.0014  Score=60.89  Aligned_cols=69  Identities=13%  Similarity=0.106  Sum_probs=54.7

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHH-hcCCCEEEEe
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEA-IQGVDGVFHT   80 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~Vi~~   80 (305)
                      +|+|+|. |-+|+++++.|.++|++|++++++++..+....        .+...+.+|..|++.++++ ++++|.|+-+
T Consensus       419 hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~--------~g~~~i~GD~~~~~~L~~a~i~~a~~viv~  488 (558)
T PRK10669        419 HALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE--------RGIRAVLGNAANEEIMQLAHLDCARWLLLT  488 (558)
T ss_pred             CEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH--------CCCeEEEcCCCCHHHHHhcCccccCEEEEE
Confidence            5889995 999999999999999999999887654332221        2678999999999888765 4678877744

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=97.29  E-value=0.00034  Score=53.50  Aligned_cols=79  Identities=20%  Similarity=0.266  Sum_probs=48.8

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEecc
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTAS   82 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a~   82 (305)
                      ||.|+|| |-.|.+++..|+.+|++|++..|+++.......-.......+++.. ...+.-..++++++++.|+||-+..
T Consensus         1 KI~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l-~~~i~~t~dl~~a~~~ad~IiiavP   78 (157)
T PF01210_consen    1 KIAVIGA-GNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKL-PENIKATTDLEEALEDADIIIIAVP   78 (157)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBE-ETTEEEESSHHHHHTT-SEEEE-S-
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCccc-CcccccccCHHHHhCcccEEEeccc
Confidence            6899997 9999999999999999999999987433322211111111112111 1122223457888999999996654


Q ss_pred             c
Q 039049           83 P   83 (305)
Q Consensus        83 ~   83 (305)
                      .
T Consensus        79 s   79 (157)
T PF01210_consen   79 S   79 (157)
T ss_dssp             G
T ss_pred             H
Confidence            4

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=97.26  E-value=0.0011  Score=56.19  Aligned_cols=35  Identities=14%  Similarity=0.221  Sum_probs=29.0

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcC-CeEEEEEeCC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKG-HMVRTTVRDP   35 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~r~~   35 (305)
                      |+||.|.||+||.|..|++.|+... .++..++.+.
T Consensus         2 ~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~   37 (349)
T COG0002           2 MIKVGIVGASGYTGLELLRLLAGHPDVELILISSRE   37 (349)
T ss_pred             CceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechh
Confidence            7899999999999999999999875 3766665444

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=97.26  E-value=0.0086  Score=47.63  Aligned_cols=110  Identities=19%  Similarity=0.259  Sum_probs=65.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhh--h-----------------hhccCccCc--eEEEEc
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGF--L-----------------WELNGAEER--LKIMKA   59 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~--~-----------------~~~~~~~~~--~~~~~~   59 (305)
                      .+|+|+|..| +|+++++.|+..|. ++++++.+.-.......  +                 ..+...++.  ++.+..
T Consensus        20 s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~~~~   98 (198)
T cd01485          20 AKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSIVEE   98 (198)
T ss_pred             CcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEEEec
Confidence            5799999755 99999999999995 68888765321111100  0                 001111233  444444


Q ss_pred             cCCC-cchHHHHhcCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeec
Q 039049           60 DLLM-EGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRY  131 (305)
Q Consensus        60 D~~d-~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~  131 (305)
                      ++.+ .+...+.+.++|+||.+...                 ......+-+.|++. ++ .+|+.++.+.+|.
T Consensus        99 ~~~~~~~~~~~~~~~~dvVi~~~d~-----------------~~~~~~ln~~c~~~-~i-p~i~~~~~G~~G~  152 (198)
T cd01485          99 DSLSNDSNIEEYLQKFTLVIATEEN-----------------YERTAKVNDVCRKH-HI-PFISCATYGLIGY  152 (198)
T ss_pred             ccccchhhHHHHHhCCCEEEECCCC-----------------HHHHHHHHHHHHHc-CC-CEEEEEeecCEEE
Confidence            4432 33455667889999966221                 11133455778887 75 5888887665554

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=97.25  E-value=0.003  Score=55.25  Aligned_cols=113  Identities=19%  Similarity=0.113  Sum_probs=70.0

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCC-e----EEE--E--EeCCCcccc-hhhhhh-ccCccCceEEEEccCCCcchHHHHh
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGH-M----VRT--T--VRDPEDLSK-VGFLWE-LNGAEERLKIMKADLLMEGSFDEAI   71 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~-~----V~~--~--~r~~~~~~~-~~~~~~-~~~~~~~~~~~~~D~~d~~~~~~~~   71 (305)
                      ||.|+|++|.+|.+++-.|+..|. .    |.+  +  +++.+.... ...+.. ......++.+...   +    -+.+
T Consensus        46 KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~~---~----y~~~  118 (387)
T TIGR01757        46 NVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGID---P----YEVF  118 (387)
T ss_pred             EEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEecC---C----HHHh
Confidence            799999999999999999998763 2    333  2  444443221 111111 1010112221111   1    2457


Q ss_pred             cCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCcc-EEEEec
Q 039049           72 QGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVK-RVVLTS  124 (305)
Q Consensus        72 ~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~S  124 (305)
                      +++|+||-+||....+  .....+.+..|+...+.+.+.+.++.+.. ++|.+|
T Consensus       119 kdaDIVVitAG~prkp--g~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVs  170 (387)
T TIGR01757       119 EDADWALLIGAKPRGP--GMERADLLDINGQIFADQGKALNAVASKNCKVLVVG  170 (387)
T ss_pred             CCCCEEEECCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcC
Confidence            7899999999986432  34566689999999999999998852223 455555

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=97.22  E-value=0.00066  Score=58.60  Aligned_cols=81  Identities=23%  Similarity=0.266  Sum_probs=49.5

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ||+|.|+|+ |-+|..++..|++.|++|++++|++.................... ....+....+..+.++++|+||-+
T Consensus         1 mmkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~vi~~   78 (325)
T PRK00094          1 MMKIAVLGA-GSWGTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIK-LPDNLRATTDLAEALADADLILVA   78 (325)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCc-CCCCeEEeCCHHHHHhCCCEEEEe
Confidence            899999995 999999999999999999999997653322211100000000000 000111123455567789999977


Q ss_pred             ccc
Q 039049           81 ASP   83 (305)
Q Consensus        81 a~~   83 (305)
                      ...
T Consensus        79 v~~   81 (325)
T PRK00094         79 VPS   81 (325)
T ss_pred             CCH
Confidence            643

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=97.20  E-value=0.0086  Score=50.99  Aligned_cols=111  Identities=19%  Similarity=0.100  Sum_probs=72.6

Q ss_pred             EEEeCCcchHHHHHHHHHHHcC--CeEEEEEeCCCcccch-hhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            4 YCVTGGTGFIAAHLVKALLDKG--HMVRTTVRDPEDLSKV-GFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         4 ilItG~~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      |.|+|+ |.+|+.++..|+..|  .++++++++.+..... ..+...............  .|    .+.++++|+||.+
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~----~~~l~~aDiVIit   73 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GD----YADAADADIVVIT   73 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CC----HHHhCCCCEEEEc
Confidence            568896 899999999999988  6899999877643321 122221111111122211  11    2467899999999


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCcc-EEEEec
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVK-RVVLTS  124 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~S  124 (305)
                      |+.....  .....+.+..|+...+.+.+.+++. +.+ .++.+|
T Consensus        74 ag~p~~~--~~~R~~l~~~n~~i~~~~~~~i~~~-~p~~~viv~s  115 (300)
T cd00300          74 AGAPRKP--GETRLDLINRNAPILRSVITNLKKY-GPDAIILVVS  115 (300)
T ss_pred             CCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEcc
Confidence            9975533  2344567889999999999999887 433 455544

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.18  E-value=0.0045  Score=49.42  Aligned_cols=107  Identities=14%  Similarity=0.153  Sum_probs=64.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhh-----------------hhhccCccCceE--EEEccC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGF-----------------LWELNGAEERLK--IMKADL   61 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~-----------------~~~~~~~~~~~~--~~~~D~   61 (305)
                      ++|+|+| .|-+|+++++.|+..|. ++++++.+.-..+....                 ...+...++.++  .+...+
T Consensus        22 ~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~i  100 (202)
T TIGR02356        22 SHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKERV  100 (202)
T ss_pred             CCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhcC
Confidence            5799999 49999999999999996 88888776321111100                 001111122333  333333


Q ss_pred             CCcchHHHHhcCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceee
Q 039049           62 LMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSI  129 (305)
Q Consensus        62 ~d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~  129 (305)
                       +.+.+.+.+.++|+||.+....                 ..-..+.+.|++. ++ .+|+.++.+.+
T Consensus       101 -~~~~~~~~~~~~D~Vi~~~d~~-----------------~~r~~l~~~~~~~-~i-p~i~~~~~g~~  148 (202)
T TIGR02356       101 -TAENLELLINNVDLVLDCTDNF-----------------ATRYLINDACVAL-GT-PLISAAVVGFG  148 (202)
T ss_pred             -CHHHHHHHHhCCCEEEECCCCH-----------------HHHHHHHHHHHHc-CC-CEEEEEeccCe
Confidence             3345677788999999875321                 1123455667777 64 58887765433

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=97.17  E-value=0.0028  Score=54.96  Aligned_cols=34  Identities=26%  Similarity=0.408  Sum_probs=28.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC-CeEEEEEeCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG-HMVRTTVRDP   35 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~r~~   35 (305)
                      ++|.|+|++|++|++|++.|...+ .++..+.++.
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~~   35 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVASP   35 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEECh
Confidence            579999999999999999998876 5888885543

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.15  E-value=0.00095  Score=50.85  Aligned_cols=73  Identities=16%  Similarity=0.127  Sum_probs=49.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC-CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG-HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ++|+|+|+ |.+|+.+++.|.+.| ++|++.+|+++........  .     ....+..+..+   ..++++++|+||++
T Consensus        20 ~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~--~-----~~~~~~~~~~~---~~~~~~~~Dvvi~~   88 (155)
T cd01065          20 KKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAER--F-----GELGIAIAYLD---LEELLAEADLIINT   88 (155)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHH--H-----hhcccceeecc---hhhccccCCEEEeC
Confidence            67999997 999999999999986 7899999886543322111  0     00001122222   34447789999999


Q ss_pred             ccccc
Q 039049           81 ASPVL   85 (305)
Q Consensus        81 a~~~~   85 (305)
                      .....
T Consensus        89 ~~~~~   93 (155)
T cd01065          89 TPVGM   93 (155)
T ss_pred             cCCCC
Confidence            87754

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=97.14  E-value=0.016  Score=52.63  Aligned_cols=170  Identities=20%  Similarity=0.142  Sum_probs=99.3

Q ss_pred             cEEEeCCc-chHHHHHHHHHHHcCCeEEEEEeCCCcc--cchhhhhhccCc-cCceEEEEccCCCcchHHHHhc------
Q 039049            3 EYCVTGGT-GFIAAHLVKALLDKGHMVRTTVRDPEDL--SKVGFLWELNGA-EERLKIMKADLLMEGSFDEAIQ------   72 (305)
Q Consensus         3 ~ilItG~~-G~iG~~l~~~l~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~------   72 (305)
                      -.+||||+ |-||..+++.|++-|.+|++.+.+-+..  .-.+.+...... +.-+-++.+++..+.++..+++      
T Consensus       398 valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewIg~eq  477 (866)
T COG4982         398 VALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWIGDEQ  477 (866)
T ss_pred             eEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHhcccc
Confidence            47899986 8899999999999999999987654322  223333333322 2234455577766555555543      


Q ss_pred             ---------------CCCEEEEeccccccCCC---CchhhhhhhhhHHHHHHHHHHHHhcC---Ccc---EEEEecccee
Q 039049           73 ---------------GVDGVFHTASPVLVPYD---NNIQATLIDPCIKGTLNVLSSCKKAK---SVK---RVVLTSSCSS  128 (305)
Q Consensus        73 ---------------~~d~Vi~~a~~~~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~---~~v~~SS~~~  128 (305)
                                     ..|++|-+|++.-....   ....+...++-+-..++++-.+++.+   ++.   ++|...|.. 
T Consensus       478 ~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLPgSPN-  556 (866)
T COG4982         478 TETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLPGSPN-  556 (866)
T ss_pred             ccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEecCCCC-
Confidence                           13788888887654321   11122233444445556665555441   111   455555532 


Q ss_pred             eeccCCCCCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcC----CcEEEEecCceecCCC
Q 039049          129 IRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCG----IDMVVVNPSFVVGPLL  194 (305)
Q Consensus       129 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~----~~~~i~Rp~~v~G~~~  194 (305)
                      -|-.+..                     ..|+.+|...|.++..++.+.+    +..+-.++|.+=|.+.
T Consensus       557 rG~FGgD---------------------GaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGL  605 (866)
T COG4982         557 RGMFGGD---------------------GAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTGL  605 (866)
T ss_pred             CCccCCC---------------------cchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeeccccc
Confidence            1111111                     5599999999999988887763    3344455566655554

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.13  E-value=0.0082  Score=48.95  Aligned_cols=107  Identities=17%  Similarity=0.145  Sum_probs=63.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccch----------------hhh-hhccCccC--ceEEEEccC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKV----------------GFL-WELNGAEE--RLKIMKADL   61 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~----------------~~~-~~~~~~~~--~~~~~~~D~   61 (305)
                      ++|+|.|+ |-+|+++++.|+..|. ++++++.+.-..+..                ... ..+...++  +++.+..++
T Consensus        22 ~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~~i  100 (228)
T cd00757          22 ARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYNERL  100 (228)
T ss_pred             CcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEeccee
Confidence            57999995 9999999999999995 677765432111110                000 01111122  344444444


Q ss_pred             CCcchHHHHhcCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceee
Q 039049           62 LMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSI  129 (305)
Q Consensus        62 ~d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~  129 (305)
                       +.+.+.+.++++|+||.+.....                 .-..+.+.|.+. ++ .+|+.+....+
T Consensus       101 -~~~~~~~~~~~~DvVi~~~d~~~-----------------~r~~l~~~~~~~-~i-p~i~~g~~g~~  148 (228)
T cd00757         101 -DAENAEELIAGYDLVLDCTDNFA-----------------TRYLINDACVKL-GK-PLVSGAVLGFE  148 (228)
T ss_pred             -CHHHHHHHHhCCCEEEEcCCCHH-----------------HHHHHHHHHHHc-CC-CEEEEEeccCE
Confidence             34556777889999998854311                 123456677777 64 57777655433

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=97.13  E-value=0.0012  Score=56.81  Aligned_cols=82  Identities=23%  Similarity=0.229  Sum_probs=54.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEE-E---cc--CCCcchHHHHhcCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIM-K---AD--LLMEGSFDEAIQGVD   75 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~---~D--~~d~~~~~~~~~~~d   75 (305)
                      |||.|+| +||+|....-.|++.||+|++++.++.+-.....-. .|...++++-+ +   .+  ++-..+.++++++.|
T Consensus         1 MkI~viG-tGYVGLv~g~~lA~~GHeVv~vDid~~KV~~ln~g~-~PI~EpgLe~ll~~~~~~gRl~fTtd~~~a~~~ad   78 (414)
T COG1004           1 MKITVIG-TGYVGLVTGACLAELGHEVVCVDIDESKVELLNKGI-SPIYEPGLEELLKENLASGRLRFTTDYEEAVKDAD   78 (414)
T ss_pred             CceEEEC-CchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHhCCC-CCCcCccHHHHHHhccccCcEEEEcCHHHHHhcCC
Confidence            6899999 699999999999999999999998876433222110 11111111110 1   11  333456778888999


Q ss_pred             EEEEeccccc
Q 039049           76 GVFHTASPVL   85 (305)
Q Consensus        76 ~Vi~~a~~~~   85 (305)
                      ++|-+.|...
T Consensus        79 v~fIavgTP~   88 (414)
T COG1004          79 VVFIAVGTPP   88 (414)
T ss_pred             EEEEEcCCCC
Confidence            9998887755

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=97.11  E-value=0.0029  Score=51.66  Aligned_cols=114  Identities=16%  Similarity=0.064  Sum_probs=70.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEE---eCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTV---RDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~---r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      -||.|.||.|.||+.|.-.|. ....|--+.   .....- -...+....     -........-.+.+++++++.|+|+
T Consensus        29 ~KVAvlGAaGGIGQPLSLLlK-~np~Vs~LaLYDi~~~~G-VaaDlSHI~-----T~s~V~g~~g~~~L~~al~~advVv  101 (345)
T KOG1494|consen   29 LKVAVLGAAGGIGQPLSLLLK-LNPLVSELALYDIANTPG-VAADLSHIN-----TNSSVVGFTGADGLENALKGADVVV  101 (345)
T ss_pred             ceEEEEecCCccCccHHHHHh-cCcccceeeeeecccCCc-ccccccccC-----CCCceeccCChhHHHHHhcCCCEEE
Confidence            479999999999999988664 444333322   111100 001111111     1111123344568999999999999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEec
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS  124 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  124 (305)
                      --||...-+..  ..++.|++|......|..++.+...-.++.++|
T Consensus       102 IPAGVPRKPGM--TRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIs  145 (345)
T KOG1494|consen  102 IPAGVPRKPGM--TRDDLFNINAGIVKTLAAAIAKCCPNALILVIS  145 (345)
T ss_pred             ecCCCCCCCCC--cHHHhhhcchHHHHHHHHHHHhhCccceeEeec
Confidence            99998764422  234478999999999999998873323444444

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=97.11  E-value=0.0013  Score=59.38  Aligned_cols=83  Identities=16%  Similarity=0.177  Sum_probs=51.5

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcC--CeEEEEEeCCCcccchhhhhhccCccCceEEE----Ec-cCCCcchHHHHhcC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKG--HMVRTTVRDPEDLSKVGFLWELNGAEERLKIM----KA-DLLMEGSFDEAIQG   73 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~----~~-D~~d~~~~~~~~~~   73 (305)
                      ||+|.|+| .|++|..++-.|++.|  ++|+++..++++......-. .+...+++.-+    .+ .+.-..++.+.+.+
T Consensus         1 ~m~I~ViG-~GyvGl~~A~~lA~~g~g~~V~gvD~~~~~v~~l~~g~-~~~~e~gl~ell~~~~~~~l~~t~~~~~~i~~   78 (473)
T PLN02353          1 MVKICCIG-AGYVGGPTMAVIALKCPDIEVVVVDISVPRIDAWNSDQ-LPIYEPGLDEVVKQCRGKNLFFSTDVEKHVAE   78 (473)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhcCCCCeEEEEECCHHHHHHHHcCC-CccCCCCHHHHHHHhhcCCEEEEcCHHHHHhc
Confidence            89999998 5999999999999885  78999998776433321110 00000011100    01 12122334566778


Q ss_pred             CCEEEEeccccc
Q 039049           74 VDGVFHTASPVL   85 (305)
Q Consensus        74 ~d~Vi~~a~~~~   85 (305)
                      +|++|-|.+...
T Consensus        79 advi~I~V~TP~   90 (473)
T PLN02353         79 ADIVFVSVNTPT   90 (473)
T ss_pred             CCEEEEEeCCCC
Confidence            999999988655

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=97.11  E-value=0.0035  Score=53.19  Aligned_cols=82  Identities=12%  Similarity=0.152  Sum_probs=52.3

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFH   79 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~   79 (305)
                      |.+|.|.||||++|..|++.|.+..+ ++..+..+...                      ++.+   ....+.++|+||-
T Consensus         2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~----------------------~~~~---~~~~~~~~DvvFl   56 (313)
T PRK11863          2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRK----------------------DAAA---RRELLNAADVAIL   56 (313)
T ss_pred             CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC----------------------cccC---chhhhcCCCEEEE
Confidence            46899999999999999999987763 55555433221                      1111   2234567899997


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccce
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCS  127 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  127 (305)
                      +.....                  ...+...+.+. |+ ++|=.|+..
T Consensus        57 alp~~~------------------s~~~~~~~~~~-g~-~VIDlSadf   84 (313)
T PRK11863         57 CLPDDA------------------AREAVALIDNP-AT-RVIDASTAH   84 (313)
T ss_pred             CCCHHH------------------HHHHHHHHHhC-CC-EEEECChhh
Confidence            764321                  33444445455 54 688888754

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=97.09  E-value=0.013  Score=46.61  Aligned_cols=108  Identities=17%  Similarity=0.162  Sum_probs=62.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhh-----------------hhhccCccCc--eEEEEccC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGF-----------------LWELNGAEER--LKIMKADL   61 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~-----------------~~~~~~~~~~--~~~~~~D~   61 (305)
                      ++|+|+|+ |-+|.++++.|+..|. ++++++.+.-..+....                 ...+...++.  ++.....+
T Consensus        22 s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~~~~  100 (197)
T cd01492          22 ARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDTDDI  100 (197)
T ss_pred             CcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEecCc
Confidence            57999997 5599999999999995 67777655321111100                 0001111223  33333333


Q ss_pred             CCcchHHHHhcCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeec
Q 039049           62 LMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRY  131 (305)
Q Consensus        62 ~d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~  131 (305)
                      .  +...+.++++|+||.+...                 ......+-+.|++. ++ .+|+.++.+-++.
T Consensus       101 ~--~~~~~~~~~~dvVi~~~~~-----------------~~~~~~ln~~c~~~-~i-p~i~~~~~G~~G~  149 (197)
T cd01492         101 S--EKPEEFFSQFDVVVATELS-----------------RAELVKINELCRKL-GV-KFYATGVHGLFGF  149 (197)
T ss_pred             c--ccHHHHHhCCCEEEECCCC-----------------HHHHHHHHHHHHHc-CC-CEEEEEecCCEEE
Confidence            3  2245567789999966321                 11133455678887 75 5788777664443

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=97.09  E-value=0.0069  Score=49.38  Aligned_cols=35  Identities=23%  Similarity=0.315  Sum_probs=28.1

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcC-CeEEE-EEeCC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKG-HMVRT-TVRDP   35 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g-~~V~~-~~r~~   35 (305)
                      |++|.|.|++|-+|+.+++.+.+.+ .++.+ +.|.+
T Consensus         2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~   38 (266)
T COG0289           2 MIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPG   38 (266)
T ss_pred             CceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCC
Confidence            6899999999999999999998876 45444 44443

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.08  E-value=0.0015  Score=55.05  Aligned_cols=67  Identities=21%  Similarity=0.250  Sum_probs=48.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      ++++|+|. |.+|+.+++.|...|.+|++.+|++++.....   .     .+...+     ..+.+.+.+.++|+||++.
T Consensus       152 k~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~---~-----~g~~~~-----~~~~l~~~l~~aDiVint~  217 (287)
T TIGR02853       152 SNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARIT---E-----MGLIPF-----PLNKLEEKVAEIDIVINTI  217 (287)
T ss_pred             CEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---H-----CCCeee-----cHHHHHHHhccCCEEEECC
Confidence            68999996 99999999999999999999999865322110   0     011211     2345677788999999986


Q ss_pred             c
Q 039049           82 S   82 (305)
Q Consensus        82 ~   82 (305)
                      .
T Consensus       218 P  218 (287)
T TIGR02853       218 P  218 (287)
T ss_pred             C
Confidence            3

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=97.08  E-value=0.0051  Score=52.51  Aligned_cols=71  Identities=17%  Similarity=0.116  Sum_probs=52.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      ++|+|+|+ |.+|..-++.+...|.+|++++|++++.+....+        ....+... .|.+..+.+.+.+|+||.++
T Consensus       168 ~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~l--------GAd~~i~~-~~~~~~~~~~~~~d~ii~tv  237 (339)
T COG1064         168 KWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKL--------GADHVINS-SDSDALEAVKEIADAIIDTV  237 (339)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHh--------CCcEEEEc-CCchhhHHhHhhCcEEEECC
Confidence            57999997 6999999998888999999999999876544433        22333322 25555555555599999998


Q ss_pred             c
Q 039049           82 S   82 (305)
Q Consensus        82 ~   82 (305)
                      +
T Consensus       238 ~  238 (339)
T COG1064         238 G  238 (339)
T ss_pred             C
Confidence            8

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=97.08  E-value=0.0027  Score=54.29  Aligned_cols=80  Identities=16%  Similarity=0.133  Sum_probs=49.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhh-----hhhccCccCceEEEEccCCCcchHHHHhcCCCE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGF-----LWELNGAEERLKIMKADLLMEGSFDEAIQGVDG   76 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   76 (305)
                      ++|.|+|+ |-+|+.++..|+..|++|++.+++++.......     +................+.-..++.+++.++|.
T Consensus         8 ~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aDl   86 (321)
T PRK07066          8 KTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADADF   86 (321)
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCCE
Confidence            67999996 999999999999999999999998754332111     101100000000000112223357778889999


Q ss_pred             EEEecc
Q 039049           77 VFHTAS   82 (305)
Q Consensus        77 Vi~~a~   82 (305)
                      ||-++.
T Consensus        87 ViEavp   92 (321)
T PRK07066         87 IQESAP   92 (321)
T ss_pred             EEECCc
Confidence            998753

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=97.07  E-value=0.0033  Score=58.86  Aligned_cols=71  Identities=14%  Similarity=0.158  Sum_probs=56.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHH-hcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEA-IQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~Vi~~   80 (305)
                      ++|+|+| .|-+|+.+++.|.+.|++++++.++++..+....        .+...+.+|.++++.++++ +++++.||-+
T Consensus       401 ~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~--------~g~~v~~GDat~~~~L~~agi~~A~~vv~~  471 (601)
T PRK03659        401 PQVIIVG-FGRFGQVIGRLLMANKMRITVLERDISAVNLMRK--------YGYKVYYGDATQLELLRAAGAEKAEAIVIT  471 (601)
T ss_pred             CCEEEec-CchHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh--------CCCeEEEeeCCCHHHHHhcCCccCCEEEEE
Confidence            4688888 5999999999999999999999988764332221        2678999999999888876 5688988865


Q ss_pred             c
Q 039049           81 A   81 (305)
Q Consensus        81 a   81 (305)
                      .
T Consensus       472 ~  472 (601)
T PRK03659        472 C  472 (601)
T ss_pred             e
Confidence            3

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=97.05  E-value=0.0072  Score=43.99  Aligned_cols=31  Identities=19%  Similarity=0.435  Sum_probs=26.9

Q ss_pred             cEEEeCCcchHHHHHHHHHHHc-CCeEEEEEe
Q 039049            3 EYCVTGGTGFIAAHLVKALLDK-GHMVRTTVR   33 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~-g~~V~~~~r   33 (305)
                      ||.|+|++|.+|..+++.|.+. ++++.++..
T Consensus         1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~   32 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAA   32 (122)
T ss_pred             CEEEECCCChHHHHHHHHHhcCCCceEEEEEe
Confidence            5899999999999999999984 788888843

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A

Probab=97.01  E-value=0.0064  Score=43.81  Aligned_cols=85  Identities=18%  Similarity=0.187  Sum_probs=51.4

Q ss_pred             CcEEEeCCc---chHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            2 PEYCVTGGT---GFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~---G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      |+|+|+|++   +-.|..+.+.|.+.|++|+.+.-+.....             +..       -..++.+.-..+|.++
T Consensus         1 ksiAVvGaS~~~~~~g~~v~~~l~~~G~~v~~Vnp~~~~i~-------------G~~-------~y~sl~e~p~~iDlav   60 (116)
T PF13380_consen    1 KSIAVVGASDNPGKFGYRVLRNLKAAGYEVYPVNPKGGEIL-------------GIK-------CYPSLAEIPEPIDLAV   60 (116)
T ss_dssp             -EEEEET--SSTTSHHHHHHHHHHHTT-EEEEESTTCSEET-------------TEE--------BSSGGGCSST-SEEE
T ss_pred             CEEEEEcccCCCCChHHHHHHHHHhCCCEEEEECCCceEEC-------------cEE-------eeccccCCCCCCCEEE
Confidence            579999988   77999999999999999999943332100             111       1222333234689888


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEecc
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSS  125 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS  125 (305)
                      -+.....                  +..+++.|.+. |++.+++.++
T Consensus        61 v~~~~~~------------------~~~~v~~~~~~-g~~~v~~~~g   88 (116)
T PF13380_consen   61 VCVPPDK------------------VPEIVDEAAAL-GVKAVWLQPG   88 (116)
T ss_dssp             E-S-HHH------------------HHHHHHHHHHH-T-SEEEE-TT
T ss_pred             EEcCHHH------------------HHHHHHHHHHc-CCCEEEEEcc
Confidence            7754422                  55677788888 9999999887

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=97.01  E-value=0.0059  Score=52.05  Aligned_cols=111  Identities=20%  Similarity=0.106  Sum_probs=68.7

Q ss_pred             EEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchh-hhhhccC-ccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            4 YCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVG-FLWELNG-AEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         4 ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~-~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      |.|+|+ |.+|..++..|+..|. +|++++++++...... .+..... ...... +..    ..+. +.++++|+||.+
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~-I~~----t~d~-~~l~dADiVIit   73 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTK-VTG----TNDY-EDIAGSDVVVIT   73 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeE-EEE----cCCH-HHhCCCCEEEEe
Confidence            578998 9999999999998876 9999999865332111 1111100 000111 111    1113 347899999999


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCcc-EEEEec
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVK-RVVLTS  124 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~S  124 (305)
                      ++.....  .....+.+..|+...+.+++.+.+. ..+ .+|.+|
T Consensus        74 ~g~p~~~--~~~r~e~~~~n~~i~~~i~~~i~~~-~p~~~iIv~s  115 (300)
T cd01339          74 AGIPRKP--GMSRDDLLGTNAKIVKEVAENIKKY-APNAIVIVVT  115 (300)
T ss_pred             cCCCCCc--CCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEec
Confidence            9875432  2233346677888899999888887 333 344444

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.01  E-value=0.002  Score=54.25  Aligned_cols=73  Identities=21%  Similarity=0.307  Sum_probs=49.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC-CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG-HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ++++|+|+ |.+|++++..|.+.| .+|++++|+.++.......  ... ...+.+   +.    ...+.+.++|+|||+
T Consensus       124 k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~--~~~-~~~~~~---~~----~~~~~~~~~DivIna  192 (278)
T PRK00258        124 KRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKL--FGA-LGKAEL---DL----ELQEELADFDLIINA  192 (278)
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHH--hhh-ccceee---cc----cchhccccCCEEEEC
Confidence            57999996 999999999999999 7999999987644332211  110 001111   11    223456789999999


Q ss_pred             ccccc
Q 039049           81 ASPVL   85 (305)
Q Consensus        81 a~~~~   85 (305)
                      .....
T Consensus       193 Tp~g~  197 (278)
T PRK00258        193 TSAGM  197 (278)
T ss_pred             CcCCC
Confidence            87765

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.99  E-value=0.0018  Score=58.07  Aligned_cols=68  Identities=24%  Similarity=0.239  Sum_probs=47.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      |+|+|+||+|.+|..+++.|.+.|++|++.+|+++.......   ..    ++.+       .......+.++|+||-+.
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~---~~----gv~~-------~~~~~e~~~~aDvVIlav   66 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAK---EL----GVEY-------ANDNIDAAKDADIVIISV   66 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHH---Hc----CCee-------ccCHHHHhccCCEEEEec
Confidence            579999999999999999999999999999998653211110   00    1111       122445567789888776


Q ss_pred             cc
Q 039049           82 SP   83 (305)
Q Consensus        82 ~~   83 (305)
                      ..
T Consensus        67 p~   68 (437)
T PRK08655         67 PI   68 (437)
T ss_pred             CH
Confidence            44

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=96.98  E-value=0.01  Score=48.86  Aligned_cols=97  Identities=21%  Similarity=0.281  Sum_probs=67.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi~   79 (305)
                      |+|||+|||+ =|+.|++.|.+.|+ |++-+-..-....      .....+.+....+-+.+.+.+.+.++  +++.||.
T Consensus         1 m~ILvlgGTt-E~r~la~~L~~~g~-v~~sv~t~~g~~~------~~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vID   72 (249)
T PF02571_consen    1 MKILVLGGTT-EGRKLAERLAEAGY-VIVSVATSYGGEL------LKPELPGLEVRVGRLGDEEGLAEFLRENGIDAVID   72 (249)
T ss_pred             CEEEEEechH-HHHHHHHHHHhcCC-EEEEEEhhhhHhh------hccccCCceEEECCCCCHHHHHHHHHhCCCcEEEE
Confidence            7899999976 58999999999998 6554433211110      00112356777888878999999885  8999998


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEE
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVL  122 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~  122 (305)
                      ..-+..               ...+.|+.++|++. +++.+-|
T Consensus        73 ATHPfA---------------~~is~na~~a~~~~-~ipylR~   99 (249)
T PF02571_consen   73 ATHPFA---------------AEISQNAIEACREL-GIPYLRF   99 (249)
T ss_pred             CCCchH---------------HHHHHHHHHHHhhc-CcceEEE
Confidence            865432               23377889999998 8775544

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]

Probab=96.97  E-value=0.0028  Score=54.07  Aligned_cols=67  Identities=16%  Similarity=0.129  Sum_probs=52.3

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      |++|.|+|| |.+|+-++..-...|++|+++.-+++.....  .        --..+.++..|.+.++++.+++|+|=
T Consensus         1 ~~tvgIlGG-GQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~--v--------a~~~i~~~~dD~~al~ela~~~DViT   67 (375)
T COG0026           1 MKTVGILGG-GQLGRMMALAAARLGIKVIVLDPDADAPAAQ--V--------ADRVIVAAYDDPEALRELAAKCDVIT   67 (375)
T ss_pred             CCeEEEEcC-cHHHHHHHHHHHhcCCEEEEecCCCCCchhh--c--------ccceeecCCCCHHHHHHHHhhCCEEE
Confidence            789999997 9999999999999999999997655433221  0        11355667778899999999888875

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.94  E-value=0.0026  Score=53.99  Aligned_cols=67  Identities=21%  Similarity=0.268  Sum_probs=48.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      ++++|+|. |.+|+.+++.|...|.+|++.+|++........+        +++++     ..+.+.+.+.++|+||+++
T Consensus       153 ~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~--------G~~~~-----~~~~l~~~l~~aDiVI~t~  218 (296)
T PRK08306        153 SNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARITEM--------GLSPF-----HLSELAEEVGKIDIIFNTI  218 (296)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc--------CCeee-----cHHHHHHHhCCCCEEEECC
Confidence            68999996 9999999999999999999999986532211110        22222     2245677788999999985


Q ss_pred             c
Q 039049           82 S   82 (305)
Q Consensus        82 ~   82 (305)
                      .
T Consensus       219 p  219 (296)
T PRK08306        219 P  219 (296)
T ss_pred             C
Confidence            3

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.94  E-value=0.0034  Score=48.38  Aligned_cols=54  Identities=17%  Similarity=0.220  Sum_probs=44.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      ++|+|+|+.+.+|..+++.|.++|.+|++..|..                             +++.+.+.++|+||.+.
T Consensus        45 k~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~-----------------------------~~l~~~l~~aDiVIsat   95 (168)
T cd01080          45 KKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT-----------------------------KNLKEHTKQADIVIVAV   95 (168)
T ss_pred             CEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc-----------------------------hhHHHHHhhCCEEEEcC
Confidence            6899999866789999999999999998887642                             24566778899999887


Q ss_pred             ccc
Q 039049           82 SPV   84 (305)
Q Consensus        82 ~~~   84 (305)
                      +..
T Consensus        96 ~~~   98 (168)
T cd01080          96 GKP   98 (168)
T ss_pred             CCC
Confidence            763

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.93  E-value=0.0037  Score=52.73  Aligned_cols=83  Identities=14%  Similarity=0.078  Sum_probs=49.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ++++|+|+ |..+++++..|+..|. +|++++|+.+..++...+...............++.+.+.+.+.+.++|+|||+
T Consensus       125 k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDivINa  203 (288)
T PRK12749        125 KTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNG  203 (288)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEEEEC
Confidence            57999997 7779999999999885 899999986422222223221111001111112222222344556789999998


Q ss_pred             ccccc
Q 039049           81 ASPVL   85 (305)
Q Consensus        81 a~~~~   85 (305)
                      -....
T Consensus       204 Tp~Gm  208 (288)
T PRK12749        204 TKVGM  208 (288)
T ss_pred             CCCCC
Confidence            76544

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=96.93  E-value=0.0017  Score=54.90  Aligned_cols=74  Identities=28%  Similarity=0.349  Sum_probs=53.6

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEE-----ccCCCcchHHHHhcCCC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMK-----ADLLMEGSFDEAIQGVD   75 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-----~D~~d~~~~~~~~~~~d   75 (305)
                      |++|.|+|+ |-=|++|+..|+++||+|+.-+|+++-......-      ..+..+++     ..+.-..++.++++++|
T Consensus         1 ~~kI~ViGa-GswGTALA~~la~ng~~V~lw~r~~~~~~~i~~~------~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad   73 (329)
T COG0240           1 MMKIAVIGA-GSWGTALAKVLARNGHEVRLWGRDEEIVAEINET------RENPKYLPGILLPPNLKATTDLAEALDGAD   73 (329)
T ss_pred             CceEEEEcC-ChHHHHHHHHHHhcCCeeEEEecCHHHHHHHHhc------CcCccccCCccCCcccccccCHHHHHhcCC
Confidence            789999996 9999999999999999999999987643322111      11333333     23344567888899999


Q ss_pred             EEEEec
Q 039049           76 GVFHTA   81 (305)
Q Consensus        76 ~Vi~~a   81 (305)
                      +|+-..
T Consensus        74 ~iv~av   79 (329)
T COG0240          74 IIVIAV   79 (329)
T ss_pred             EEEEEC
Confidence            998654

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.92  E-value=0.016  Score=51.03  Aligned_cols=105  Identities=16%  Similarity=0.152  Sum_probs=62.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcc----------------cchhhh-hhccCccCce--EEEEccC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDL----------------SKVGFL-WELNGAEERL--KIMKADL   61 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~----------------~~~~~~-~~~~~~~~~~--~~~~~D~   61 (305)
                      ++|+|+|+ |.+|+++++.|+..|. ++++++++.-..                .+.... ..+...++.+  +.+...+
T Consensus       136 ~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~~  214 (376)
T PRK08762        136 ARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQERV  214 (376)
T ss_pred             CcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEeccC
Confidence            57999985 9999999999999996 788887762110                011100 0111112233  3333333


Q ss_pred             CCcchHHHHhcCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccce
Q 039049           62 LMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCS  127 (305)
Q Consensus        62 ~d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  127 (305)
                      . .+.+.++++++|+||++.....                 .-..+.+.|.+. ++ .+|+.+...
T Consensus       215 ~-~~~~~~~~~~~D~Vv~~~d~~~-----------------~r~~ln~~~~~~-~i-p~i~~~~~g  260 (376)
T PRK08762        215 T-SDNVEALLQDVDVVVDGADNFP-----------------TRYLLNDACVKL-GK-PLVYGAVFR  260 (376)
T ss_pred             C-hHHHHHHHhCCCEEEECCCCHH-----------------HHHHHHHHHHHc-CC-CEEEEEecc
Confidence            3 3456677889999998853311                 122355667777 64 578776544

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.92  E-value=0.012  Score=45.82  Aligned_cols=77  Identities=13%  Similarity=0.165  Sum_probs=47.9

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchh---------------h-hhhccCccC--ceEEEEccCCC
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVG---------------F-LWELNGAEE--RLKIMKADLLM   63 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~---------------~-~~~~~~~~~--~~~~~~~D~~d   63 (305)
                      +|+|+|+ |-+|+++++.|+..|. ++++++.+.-..+...               . ...+...++  +++.+...+. 
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~-   78 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKID-   78 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecC-
Confidence            5899995 9999999999999997 6888877641111000               0 000111122  3444444443 


Q ss_pred             cchHHHHhcCCCEEEEec
Q 039049           64 EGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus        64 ~~~~~~~~~~~d~Vi~~a   81 (305)
                      .+.+.+.++++|+||.+.
T Consensus        79 ~~~~~~~l~~~DlVi~~~   96 (174)
T cd01487          79 ENNLEGLFGDCDIVVEAF   96 (174)
T ss_pred             hhhHHHHhcCCCEEEECC
Confidence            345677888999999873

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.91  E-value=0.0021  Score=54.36  Aligned_cols=38  Identities=18%  Similarity=0.149  Sum_probs=33.9

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCccc
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLS   39 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~   39 (305)
                      |++|.|+|+ |.+|..++..|+..|++|++.+++++...
T Consensus         5 ~~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~   42 (286)
T PRK07819          5 IQRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELAT   42 (286)
T ss_pred             ccEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHH
Confidence            368999996 99999999999999999999999987544

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=96.87  E-value=0.0041  Score=55.55  Aligned_cols=82  Identities=23%  Similarity=0.252  Sum_probs=49.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEE-----E-EccCCCcchHHHHhcCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKI-----M-KADLLMEGSFDEAIQGVD   75 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-----~-~~D~~d~~~~~~~~~~~d   75 (305)
                      |+|.|+| .|++|..++..|++.|++|++.++++++......-. .+...+++.-     + .+.+.-..+..++++++|
T Consensus         1 mkI~vIG-lG~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~-~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~ad   78 (411)
T TIGR03026         1 MKIAVIG-LGYVGLPLAALLADLGHEVTGVDIDQEKVDKLNKGK-SPIYEPGLDELLAKALAAGRLRATTDYEDAIRDAD   78 (411)
T ss_pred             CEEEEEC-CCchhHHHHHHHHhcCCeEEEEECCHHHHHHhhcCC-CCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCC
Confidence            4799998 599999999999999999999999876433221100 0000000000     0 000111223556677899


Q ss_pred             EEEEeccccc
Q 039049           76 GVFHTASPVL   85 (305)
Q Consensus        76 ~Vi~~a~~~~   85 (305)
                      +||-+.....
T Consensus        79 vvii~vpt~~   88 (411)
T TIGR03026        79 VIIICVPTPL   88 (411)
T ss_pred             EEEEEeCCCC
Confidence            9998877643

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.87  E-value=0.0013  Score=48.06  Aligned_cols=33  Identities=30%  Similarity=0.471  Sum_probs=28.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEE-eCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTV-RDP   35 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~-r~~   35 (305)
                      ++|-|+|+ |-+|.+|++.|.+.||+|..+. |+.
T Consensus        11 l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~   44 (127)
T PF10727_consen   11 LKIGIIGA-GRVGTALARALARAGHEVVGVYSRSP   44 (127)
T ss_dssp             -EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH
T ss_pred             cEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCc
Confidence            57999997 9999999999999999998873 544

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=96.87  E-value=0.0028  Score=53.94  Aligned_cols=67  Identities=16%  Similarity=0.193  Sum_probs=47.0

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ||+|.|+| .|.+|..+++.|++.|++|++.+|++.+......   .     ++.       -.+.+.++++++|+||-+
T Consensus         2 ~~~IgviG-~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~---~-----g~~-------~~~~~~e~~~~~d~vi~~   65 (296)
T PRK11559          2 TMKVGFIG-LGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIA---A-----GAE-------TASTAKAVAEQCDVIITM   65 (296)
T ss_pred             CceEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH---C-----CCe-------ecCCHHHHHhcCCEEEEe
Confidence            47899999 5999999999999999999999887654322110   0     111       112355667788999987


Q ss_pred             ccc
Q 039049           81 ASP   83 (305)
Q Consensus        81 a~~   83 (305)
                      ...
T Consensus        66 vp~   68 (296)
T PRK11559         66 LPN   68 (296)
T ss_pred             CCC
Confidence            643

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.85  E-value=0.002  Score=55.66  Aligned_cols=36  Identities=31%  Similarity=0.234  Sum_probs=32.6

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCc
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPED   37 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~   37 (305)
                      ||+|.|+|+ |-+|..++..|++.|++|++..|+++.
T Consensus         4 ~m~I~iIG~-G~mG~~ia~~L~~~G~~V~~~~r~~~~   39 (328)
T PRK14618          4 GMRVAVLGA-GAWGTALAVLAASKGVPVRLWARRPEF   39 (328)
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence            578999985 999999999999999999999997654

>cd05295 MDH_like Malate dehydrogenase-like

Probab=96.85  E-value=0.0061  Score=54.27  Aligned_cols=172  Identities=13%  Similarity=0.061  Sum_probs=95.9

Q ss_pred             cEEEeCCcchHHHHHHHHHHHc---CC--e--EEEEEeC--CCcccc-hhhhhh-ccCccCceEEEEccCCCcchHHHHh
Q 039049            3 EYCVTGGTGFIAAHLVKALLDK---GH--M--VRTTVRD--PEDLSK-VGFLWE-LNGAEERLKIMKADLLMEGSFDEAI   71 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~---g~--~--V~~~~r~--~~~~~~-~~~~~~-~~~~~~~~~~~~~D~~d~~~~~~~~   71 (305)
                      +|+||||+|.||.+|+-.+++-   |.  .  +.+++..  .+.... .-.+.. ......++.+. .      .-...+
T Consensus       125 ~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-~------~~~ea~  197 (452)
T cd05295         125 QVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-T------DLDVAF  197 (452)
T ss_pred             EEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-E------CCHHHh
Confidence            6999999999999999999762   32  2  4444442  111110 001111 10101122222 1      124668


Q ss_pred             cCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCc--cEEEEeccceeeeccCCCCCCcccCCCCCCCc
Q 039049           72 QGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSV--KRVVLTSSCSSIRYRHDAQQVSPLNESHWSDP  149 (305)
Q Consensus        72 ~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~  149 (305)
                      +++|+||-+||.....  .....+.++.|....+.+.+.+.+. ..  .+++.+.|--+---.      .......+.-|
T Consensus       198 ~daDvvIitag~prk~--G~~R~DLL~~N~~Ifk~~g~~I~~~-a~~~~~VlVv~tNPvD~~t------~i~~k~apgiP  268 (452)
T cd05295         198 KDAHVIVLLDDFLIKE--GEDLEGCIRSRVAICQLYGPLIEKN-AKEDVKVIVAGRTFLNLKT------SILIKYAPSIP  268 (452)
T ss_pred             CCCCEEEECCCCCCCc--CCCHHHHHHHHHHHHHHHHHHHHHh-CCCCCeEEEEeCCcHHHHH------HHHHHHcCCCC
Confidence            8999999999985433  3345668999999999999999887 43  456555542110000      01111111111


Q ss_pred             ccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCC
Q 039049          150 DYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLA  195 (305)
Q Consensus       150 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~  195 (305)
                      .     ++.-|.+....-++....++..+++...++-..|.|....
T Consensus       269 ~-----~rVig~gtlds~R~r~~LA~kl~V~~~~V~~~~VwGeHG~  309 (452)
T cd05295         269 R-----KNIIAVARLQENRAKALLARKLNVNSAGIKDVIVWGNIGG  309 (452)
T ss_pred             H-----HHEEEecchHHHHHHHHHHHHhCcCHHHceeeEEEEccCC
Confidence            0     0334444455445555556677888888877778786543

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR00518 alaDH alanine dehydrogenase

Probab=96.84  E-value=0.0033  Score=55.09  Aligned_cols=73  Identities=12%  Similarity=0.130  Sum_probs=52.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      .+|+|+|+ |-+|+..++.|...|.+|++++|++.+.....   ...    . ..+..+..+.+.+.+.+.++|+||+++
T Consensus       168 ~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~---~~~----g-~~v~~~~~~~~~l~~~l~~aDvVI~a~  238 (370)
T TIGR00518       168 GDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLD---AEF----G-GRIHTRYSNAYEIEDAVKRADLLIGAV  238 (370)
T ss_pred             ceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH---Hhc----C-ceeEeccCCHHHHHHHHccCCEEEEcc
Confidence            36999986 99999999999999999999998765332211   111    0 112234456677888888999999988


Q ss_pred             cc
Q 039049           82 SP   83 (305)
Q Consensus        82 ~~   83 (305)
                      ..
T Consensus       239 ~~  240 (370)
T TIGR00518       239 LI  240 (370)
T ss_pred             cc
Confidence            55

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=96.83  E-value=0.0087  Score=50.56  Aligned_cols=81  Identities=11%  Similarity=0.150  Sum_probs=51.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      -+|.|.||+||.|..|++.|+...+ ++..+.-+..                      .+   +.+..++++++|+||.+
T Consensus         2 ~~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~----------------------~~---~~~~~~~~~~~D~vFla   56 (310)
T TIGR01851         2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRR----------------------KD---AAERAKLLNAADVAILC   56 (310)
T ss_pred             CeEEEECCCChhHHHHHHHHhCCCCeEEEEEecccc----------------------cC---cCCHhHhhcCCCEEEEC
Confidence            3799999999999999999987653 5555532211                      01   11234566789999977


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccce
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCS  127 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  127 (305)
                      .....                  ...+...+.+. ++ ++|=.|+..
T Consensus        57 lp~~~------------------s~~~~~~~~~~-g~-~VIDlSadf   83 (310)
T TIGR01851        57 LPDDA------------------AREAVSLVDNP-NT-CIIDASTAY   83 (310)
T ss_pred             CCHHH------------------HHHHHHHHHhC-CC-EEEECChHH
Confidence            64421                  33444445444 54 688888754

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=96.83  E-value=0.0025  Score=56.86  Aligned_cols=38  Identities=16%  Similarity=0.219  Sum_probs=33.8

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCccc
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLS   39 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~   39 (305)
                      ||+|.|+| .|++|..++..|++.|++|+++++++++..
T Consensus         3 ~~kI~VIG-lG~~G~~~A~~La~~G~~V~~~D~~~~~v~   40 (415)
T PRK11064          3 FETISVIG-LGYIGLPTAAAFASRQKQVIGVDINQHAVD   40 (415)
T ss_pred             ccEEEEEC-cchhhHHHHHHHHhCCCEEEEEeCCHHHHH
Confidence            57899998 599999999999999999999999876443

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=96.80  E-value=0.0034  Score=41.92  Aligned_cols=33  Identities=36%  Similarity=0.542  Sum_probs=30.6

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCC
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPE   36 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~   36 (305)
                      +|+|+|| |++|..++..|.+.|.+|+++.|++.
T Consensus         1 ~vvViGg-G~ig~E~A~~l~~~g~~vtli~~~~~   33 (80)
T PF00070_consen    1 RVVVIGG-GFIGIELAEALAELGKEVTLIERSDR   33 (80)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHTTSEEEEEESSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHhCcEEEEEeccch
Confidence            5889997 99999999999999999999999875

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit

Probab=96.80  E-value=0.029  Score=47.17  Aligned_cols=89  Identities=15%  Similarity=0.142  Sum_probs=60.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcC--CCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQG--VDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~Vi~   79 (305)
                      .+|+|.|.||.+|+.+.+.|...|.+++. .-++.+-..            .+    ..+.-..++.++.+.  +|.++-
T Consensus         7 ~~~~~~g~~~~~~~~~~~~~~~~g~~~v~-~V~p~~~~~------------~v----~G~~~y~sv~dlp~~~~~Dlavi   69 (286)
T TIGR01019         7 TKVIVQGITGSQGSFHTEQMLAYGTNIVG-GVTPGKGGT------------TV----LGLPVFDSVKEAVEETGANASVI   69 (286)
T ss_pred             CcEEEecCCcHHHHHHHHHHHhCCCCEEE-EECCCCCcc------------ee----cCeeccCCHHHHhhccCCCEEEE
Confidence            47999999999999999999999988444 444431000            11    122234456666665  798887


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccc
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSC  126 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~  126 (305)
                      +.....                  ...+++.|.+. |++.+|.+|+.
T Consensus        70 ~vpa~~------------------v~~~l~e~~~~-Gvk~avIis~G   97 (286)
T TIGR01019        70 FVPAPF------------------AADAIFEAIDA-GIELIVCITEG   97 (286)
T ss_pred             ecCHHH------------------HHHHHHHHHHC-CCCEEEEECCC
Confidence            765432                  44566677777 99999888875

ATP citrate lyases appear to form an outgroup.

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.78  E-value=0.001  Score=56.33  Aligned_cols=38  Identities=16%  Similarity=0.247  Sum_probs=34.1

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCccc
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLS   39 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~   39 (305)
                      +++|.|+|+ |.+|..++..|++.|++|++.+++++...
T Consensus         1 ~~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~   38 (288)
T PRK09260          1 IEKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLE   38 (288)
T ss_pred             CcEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHH
Confidence            578999997 99999999999999999999999876543

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=96.75  E-value=0.0048  Score=51.72  Aligned_cols=73  Identities=14%  Similarity=0.090  Sum_probs=47.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      ++++|+|+ |.+|++++..|++.|.+|++.+|+.++.......   ......+....  +.+     ..+.++|+|||+.
T Consensus       118 k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~---~~~~~~~~~~~--~~~-----~~~~~~DivInat  186 (270)
T TIGR00507       118 QRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAER---FQRYGEIQAFS--MDE-----LPLHRVDLIINAT  186 (270)
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---HhhcCceEEec--hhh-----hcccCccEEEECC
Confidence            57999997 8999999999999999999999986543322211   11111122221  111     1234789999998


Q ss_pred             cccc
Q 039049           82 SPVL   85 (305)
Q Consensus        82 ~~~~   85 (305)
                      +...
T Consensus       187 p~gm  190 (270)
T TIGR00507       187 SAGM  190 (270)
T ss_pred             CCCC
Confidence            8754

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.75  E-value=0.0097  Score=53.82  Aligned_cols=73  Identities=18%  Similarity=0.078  Sum_probs=47.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccch-hhhhhccCccCceEEEEccCCCcchHHHHhc-CCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKV-GFLWELNGAEERLKIMKADLLMEGSFDEAIQ-GVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-~~d~Vi~   79 (305)
                      ++|+|+|+.| +|...++.|++.|++|.+..++....... ..+..     .++.+..+.  +..   .++. ++|.||+
T Consensus         6 k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~-----~g~~~~~~~--~~~---~~~~~~~d~vV~   74 (447)
T PRK02472          6 KKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLE-----EGIKVICGS--HPL---ELLDEDFDLMVK   74 (447)
T ss_pred             CEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHh-----cCCEEEeCC--CCH---HHhcCcCCEEEE
Confidence            5799999977 99999999999999999998765322111 11211     134444332  111   1233 4899999


Q ss_pred             eccccc
Q 039049           80 TASPVL   85 (305)
Q Consensus        80 ~a~~~~   85 (305)
                      ..|...
T Consensus        75 s~gi~~   80 (447)
T PRK02472         75 NPGIPY   80 (447)
T ss_pred             CCCCCC
Confidence            998754

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.75  E-value=0.028  Score=45.26  Aligned_cols=78  Identities=15%  Similarity=0.173  Sum_probs=47.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchh---------------hhh-hccCccC--ceEEEEccCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVG---------------FLW-ELNGAEE--RLKIMKADLL   62 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~---------------~~~-~~~~~~~--~~~~~~~D~~   62 (305)
                      .+|+|+|+ |.+|+++++.|+..|. ++++++.+.-..+...               ... .+...++  +++.+...+.
T Consensus        29 ~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~~i~  107 (212)
T PRK08644         29 AKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNEKID  107 (212)
T ss_pred             CCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEeeecC
Confidence            57999995 9999999999999996 6888877621111100               000 0001112  3444444443


Q ss_pred             CcchHHHHhcCCCEEEEec
Q 039049           63 MEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus        63 d~~~~~~~~~~~d~Vi~~a   81 (305)
                      + +.+.+.++++|+||.+.
T Consensus       108 ~-~~~~~~~~~~DvVI~a~  125 (212)
T PRK08644        108 E-DNIEELFKDCDIVVEAF  125 (212)
T ss_pred             H-HHHHHHHcCCCEEEECC
Confidence            3 44567788899999873

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=96.75  E-value=0.0081  Score=56.47  Aligned_cols=71  Identities=15%  Similarity=0.228  Sum_probs=56.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHH-hcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEA-IQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~Vi~~   80 (305)
                      ++|+|+|. |-+|+.+++.|.++|++++++..+++..+..+.        .+...+.+|.++++.++++ +++++.||-+
T Consensus       401 ~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~--------~g~~v~~GDat~~~~L~~agi~~A~~vvv~  471 (621)
T PRK03562        401 PRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRK--------FGMKVFYGDATRMDLLESAGAAKAEVLINA  471 (621)
T ss_pred             CcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh--------cCCeEEEEeCCCHHHHHhcCCCcCCEEEEE
Confidence            46899995 999999999999999999999888764333221        2678999999999887764 4678988866


Q ss_pred             c
Q 039049           81 A   81 (305)
Q Consensus        81 a   81 (305)
                      .
T Consensus       472 ~  472 (621)
T PRK03562        472 I  472 (621)
T ss_pred             e
Confidence            3

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.74  E-value=0.0041  Score=51.99  Aligned_cols=77  Identities=16%  Similarity=0.139  Sum_probs=49.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC-CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG-HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ++++|.|| |..+++++..|++.| .+|+++.|+.++.......-...  ...+..  .++.+.+...    .+|+|||+
T Consensus       127 ~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~--~~~~~~--~~~~~~~~~~----~~dliINa  197 (283)
T COG0169         127 KRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGEL--GAAVEA--AALADLEGLE----EADLLINA  197 (283)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhc--cccccc--cccccccccc----ccCEEEEC
Confidence            57999996 999999999999999 58999999887655443221111  001111  1222211111    67999999


Q ss_pred             ccccccC
Q 039049           81 ASPVLVP   87 (305)
Q Consensus        81 a~~~~~~   87 (305)
                      -......
T Consensus       198 Tp~Gm~~  204 (283)
T COG0169         198 TPVGMAG  204 (283)
T ss_pred             CCCCCCC
Confidence            8766544

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=96.74  E-value=0.0039  Score=53.01  Aligned_cols=67  Identities=18%  Similarity=0.218  Sum_probs=47.1

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      |++|.|+| .|.+|..+++.|++.|++|++.+|++++.......        ++       ....+..++.+++|+||-+
T Consensus         1 m~~Ig~IG-lG~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~--------g~-------~~~~s~~~~~~~aDvVi~~   64 (296)
T PRK15461          1 MAAIAFIG-LGQMGSPMASNLLKQGHQLQVFDVNPQAVDALVDK--------GA-------TPAASPAQAAAGAEFVITM   64 (296)
T ss_pred             CCeEEEEe-eCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHc--------CC-------cccCCHHHHHhcCCEEEEe
Confidence            78999999 59999999999999999999999987643322110        11       1122344566677888876


Q ss_pred             ccc
Q 039049           81 ASP   83 (305)
Q Consensus        81 a~~   83 (305)
                      ...
T Consensus        65 vp~   67 (296)
T PRK15461         65 LPN   67 (296)
T ss_pred             cCC
Confidence            543

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.74  E-value=0.045  Score=40.99  Aligned_cols=104  Identities=16%  Similarity=0.226  Sum_probs=62.0

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccch----------------hhhh-hccCccCc--eEEEEccCC
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKV----------------GFLW-ELNGAEER--LKIMKADLL   62 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~----------------~~~~-~~~~~~~~--~~~~~~D~~   62 (305)
                      +|+|+|+ |-+|+++++.|+..|. ++++++.+.-..+..                ..+. .....++.  ++.+..++.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            5899996 9999999999999997 688886552111110                0000 01111222  334444443


Q ss_pred             CcchHHHHhcCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccce
Q 039049           63 MEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCS  127 (305)
Q Consensus        63 d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  127 (305)
                      .. ...+.+.++|+||.+....                 .....+.+.|++. ++ .+|..++..
T Consensus        80 ~~-~~~~~~~~~diVi~~~d~~-----------------~~~~~l~~~~~~~-~i-~~i~~~~~g  124 (143)
T cd01483          80 ED-NLDDFLDGVDLVIDAIDNI-----------------AVRRALNRACKEL-GI-PVIDAGGLG  124 (143)
T ss_pred             hh-hHHHHhcCCCEEEECCCCH-----------------HHHHHHHHHHHHc-CC-CEEEEcCCC
Confidence            32 2356678899999875431                 1244566778887 64 577776654

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.74  E-value=0.0065  Score=52.35  Aligned_cols=35  Identities=29%  Similarity=0.357  Sum_probs=32.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPE   36 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~   36 (305)
                      .+++|+||+|.+|..+++.+...|.+|++++++++
T Consensus       164 ~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~  198 (332)
T cd08259         164 DTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPE  198 (332)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHH
Confidence            47999999999999999999999999999988764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.74  E-value=0.0027  Score=49.65  Aligned_cols=67  Identities=19%  Similarity=0.091  Sum_probs=47.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      ++|.|+| .|-||+++++.|..-|.+|++.+|+..........        .+        ...++.+++.++|+|+.+.
T Consensus        37 ~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~--------~~--------~~~~l~ell~~aDiv~~~~   99 (178)
T PF02826_consen   37 KTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEF--------GV--------EYVSLDELLAQADIVSLHL   99 (178)
T ss_dssp             SEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHT--------TE--------EESSHHHHHHH-SEEEE-S
T ss_pred             CEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhhcccc--------cc--------eeeehhhhcchhhhhhhhh
Confidence            6899999 59999999999999999999999987643211100        11        2335778888899999888


Q ss_pred             cccc
Q 039049           82 SPVL   85 (305)
Q Consensus        82 ~~~~   85 (305)
                      ....
T Consensus       100 plt~  103 (178)
T PF02826_consen  100 PLTP  103 (178)
T ss_dssp             SSST
T ss_pred             cccc
Confidence            7644

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.73  E-value=0.034  Score=46.28  Aligned_cols=104  Identities=15%  Similarity=0.273  Sum_probs=61.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC-CeEEEEEeCCCcccchh----------------hh-hhccCccCceEEEE-ccCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG-HMVRTTVRDPEDLSKVG----------------FL-WELNGAEERLKIMK-ADLL   62 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~----------------~~-~~~~~~~~~~~~~~-~D~~   62 (305)
                      .+|+|+|+ |.+|+++++.|+..| -++++++.+.-......                .+ ..+...++.+.+.. -+..
T Consensus        31 s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~i  109 (268)
T PRK15116         31 AHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDFI  109 (268)
T ss_pred             CCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEeccc
Confidence            57999995 999999999999999 57888876532111111                00 01111223333322 2333


Q ss_pred             CcchHHHHhc-CCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEecc
Q 039049           63 MEGSFDEAIQ-GVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSS  125 (305)
Q Consensus        63 d~~~~~~~~~-~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS  125 (305)
                      +++.+.+++. ++|+||.+.....                 .-..|.+.|++. ++ .||..++
T Consensus       110 ~~e~~~~ll~~~~D~VIdaiD~~~-----------------~k~~L~~~c~~~-~i-p~I~~gG  154 (268)
T PRK15116        110 TPDNVAEYMSAGFSYVIDAIDSVR-----------------PKAALIAYCRRN-KI-PLVTTGG  154 (268)
T ss_pred             ChhhHHHHhcCCCCEEEEcCCCHH-----------------HHHHHHHHHHHc-CC-CEEEECC
Confidence            4555666664 6999998865421                 133577788887 65 4665544

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=96.73  E-value=0.0088  Score=51.48  Aligned_cols=94  Identities=13%  Similarity=0.141  Sum_probs=54.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC---eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH---MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      ++|.|+||||++|..|++.|.++.|   ++..+..+.+......    ...  ..+.+.  ++   +.  ..+.++|+||
T Consensus         5 ~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~----~~~--~~~~v~--~~---~~--~~~~~~Dvvf   71 (336)
T PRK08040          5 WNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLR----FGG--KSVTVQ--DA---AE--FDWSQAQLAF   71 (336)
T ss_pred             CEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEE----ECC--cceEEE--eC---ch--hhccCCCEEE
Confidence            5899999999999999999998543   6666644432111111    100  011111  21   11  1235789999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEecccee
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSS  128 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~  128 (305)
                      .+++...                  ...+...+.+. |+ ++|=.|+..-
T Consensus        72 ~a~p~~~------------------s~~~~~~~~~~-g~-~VIDlS~~fR  101 (336)
T PRK08040         72 FVAGREA------------------SAAYAEEATNA-GC-LVIDSSGLFA  101 (336)
T ss_pred             ECCCHHH------------------HHHHHHHHHHC-CC-EEEECChHhc
Confidence            8775422                  33455555555 64 6888887653

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.71  E-value=0.0015  Score=55.34  Aligned_cols=36  Identities=19%  Similarity=0.197  Sum_probs=32.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcc
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDL   38 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~   38 (305)
                      ++|.|+|+ |.+|+.++..|+..|++|++.+++++..
T Consensus         4 ~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l   39 (287)
T PRK08293          4 KNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEAL   39 (287)
T ss_pred             cEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHH
Confidence            78999996 9999999999999999999999987643

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=96.71  E-value=0.019  Score=48.84  Aligned_cols=109  Identities=15%  Similarity=0.092  Sum_probs=69.8

Q ss_pred             EeCCcchHHHHHHHHHHHcCC--eEEEEEeCCCcccc-hhhhhhccC-ccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            6 VTGGTGFIAAHLVKALLDKGH--MVRTTVRDPEDLSK-VGFLWELNG-AEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         6 ItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~-~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      |+|+ |.||.+++..|+..+.  ++.+++++.+.... ...+..... ...++.+. +  .+    -+.++++|+||-+|
T Consensus         1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~-~--~~----~~~~~daDivVita   72 (299)
T TIGR01771         1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIR-S--GD----YSDCKDADLVVITA   72 (299)
T ss_pred             CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEe-c--CC----HHHHCCCCEEEECC
Confidence            4675 9999999999988874  79999886653321 112222111 01122222 1  22    24577899999999


Q ss_pred             cccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEec
Q 039049           82 SPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS  124 (305)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  124 (305)
                      |....+  .....+.++.|+...+.+.+.+++++.-..++.+|
T Consensus        73 g~~rk~--g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs  113 (299)
T TIGR01771        73 GAPQKP--GETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVAT  113 (299)
T ss_pred             CCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence            985432  23445688999999999999998873223455555

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.69  E-value=0.009  Score=50.01  Aligned_cols=36  Identities=28%  Similarity=0.478  Sum_probs=31.9

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcC---CeEEEEEeCCCc
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKG---HMVRTTVRDPED   37 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g---~~V~~~~r~~~~   37 (305)
                      ||+|.|+|+ |-+|..+++.|.+.|   ++|.+.+|+++.
T Consensus         2 mm~I~iIG~-G~mG~~la~~l~~~g~~~~~v~v~~r~~~~   40 (267)
T PRK11880          2 MKKIGFIGG-GNMASAIIGGLLASGVPAKDIIVSDPSPEK   40 (267)
T ss_pred             CCEEEEEec-hHHHHHHHHHHHhCCCCcceEEEEcCCHHH
Confidence            688999995 999999999999988   789999987653

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.68  E-value=0.0064  Score=51.07  Aligned_cols=53  Identities=13%  Similarity=0.194  Sum_probs=42.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      ++++|+|++|.+|+.++..|++.|.+|++..|+.                             ..+.+.++++|+||++.
T Consensus       160 k~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t-----------------------------~~L~~~~~~aDIvI~At  210 (283)
T PRK14192        160 KHAVVVGRSAILGKPMAMMLLNANATVTICHSRT-----------------------------QNLPELVKQADIIVGAV  210 (283)
T ss_pred             CEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc-----------------------------hhHHHHhccCCEEEEcc
Confidence            6899999999999999999999999888886521                             12445557899999998


Q ss_pred             cc
Q 039049           82 SP   83 (305)
Q Consensus        82 ~~   83 (305)
                      |.
T Consensus       211 G~  212 (283)
T PRK14192        211 GK  212 (283)
T ss_pred             CC
Confidence            63

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.65  E-value=0.0068  Score=51.91  Aligned_cols=34  Identities=24%  Similarity=0.289  Sum_probs=30.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPE   36 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~   36 (305)
                      |+|.|+|+ |-+|+++++.|++.|++|++.+|+..
T Consensus         5 m~I~iiG~-G~~G~~lA~~l~~~G~~V~~~~r~~~   38 (308)
T PRK14619          5 KTIAILGA-GAWGSTLAGLASANGHRVRVWSRRSG   38 (308)
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            67999985 99999999999999999999998754

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=96.64  E-value=0.0084  Score=41.47  Aligned_cols=67  Identities=25%  Similarity=0.365  Sum_probs=44.3

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcC---CeEEEE-EeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKG---HMVRTT-VRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g---~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      ||.|+| +|-+|.+|++.|++.|   ++|... .|++++.......   .    .+.+..      ....+++++.|+||
T Consensus         1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~---~----~~~~~~------~~~~~~~~~advvi   66 (96)
T PF03807_consen    1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKE---Y----GVQATA------DDNEEAAQEADVVI   66 (96)
T ss_dssp             EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHH---C----TTEEES------EEHHHHHHHTSEEE
T ss_pred             CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHh---h----cccccc------CChHHhhccCCEEE
Confidence            688896 6999999999999999   899966 7877644332211   1    111111      13556666889999


Q ss_pred             Eeccc
Q 039049           79 HTASP   83 (305)
Q Consensus        79 ~~a~~   83 (305)
                      .+.-+
T Consensus        67 lav~p   71 (96)
T PF03807_consen   67 LAVKP   71 (96)
T ss_dssp             E-S-G
T ss_pred             EEECH
Confidence            88654

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=96.62  E-value=0.014  Score=51.62  Aligned_cols=36  Identities=17%  Similarity=0.232  Sum_probs=30.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCccc
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLS   39 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~   39 (305)
                      |+|.|+| .|++|..++..|+ .||+|+++++++++..
T Consensus         1 mkI~VIG-lGyvGl~~A~~lA-~G~~VigvD~d~~kv~   36 (388)
T PRK15057          1 MKITISG-TGYVGLSNGLLIA-QNHEVVALDILPSRVA   36 (388)
T ss_pred             CEEEEEC-CCHHHHHHHHHHH-hCCcEEEEECCHHHHH
Confidence            4799998 5999999997776 5999999999877544

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.62  E-value=0.009  Score=51.82  Aligned_cols=36  Identities=17%  Similarity=0.144  Sum_probs=32.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCc
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPED   37 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~   37 (305)
                      .+|+|+||+|.+|..+++.+...|.+|+++++++++
T Consensus       153 ~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~  188 (338)
T cd08295         153 ETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEK  188 (338)
T ss_pred             CEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence            479999999999999999888899999999887653

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.62  E-value=0.0076  Score=51.94  Aligned_cols=36  Identities=17%  Similarity=0.121  Sum_probs=31.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCc
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPED   37 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~   37 (305)
                      .+|+|+||+|.+|..+++.+...|.+|+++++++++
T Consensus       140 ~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~  175 (325)
T TIGR02825       140 ETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEK  175 (325)
T ss_pred             CEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence            479999999999999999888899999999887653

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK08229 2-dehydropantoate 2-reductase; Provisional

Probab=96.60  E-value=0.0037  Score=54.38  Aligned_cols=34  Identities=32%  Similarity=0.364  Sum_probs=31.3

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDP   35 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~   35 (305)
                      ||+|.|+|+ |.+|..++..|++.|++|++++|++
T Consensus         2 ~mkI~IiG~-G~mG~~~A~~L~~~G~~V~~~~r~~   35 (341)
T PRK08229          2 MARICVLGA-GSIGCYLGGRLAAAGADVTLIGRAR   35 (341)
T ss_pred             CceEEEECC-CHHHHHHHHHHHhcCCcEEEEecHH
Confidence            688999995 9999999999999999999999864

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=96.59  E-value=0.0091  Score=53.05  Aligned_cols=69  Identities=13%  Similarity=0.106  Sum_probs=51.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi~   79 (305)
                      |+|+|+|+ |.+|+.+++.+.+.|++|++++.++......  .      . . .++..|..|.+.+.++++  ++|.|+-
T Consensus        13 ~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~--~------a-d-~~~~~~~~d~~~l~~~~~~~~id~vi~   81 (395)
T PRK09288         13 TRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQ--V------A-H-RSHVIDMLDGDALRAVIEREKPDYIVP   81 (395)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchHH--h------h-h-heEECCCCCHHHHHHHHHHhCCCEEEE
Confidence            58999996 8999999999999999999998876532111  0      0 1 245678888888888877  7898885


Q ss_pred             ec
Q 039049           80 TA   81 (305)
Q Consensus        80 ~a   81 (305)
                      ..
T Consensus        82 ~~   83 (395)
T PRK09288         82 EI   83 (395)
T ss_pred             ee
Confidence            43

>PRK08223 hypothetical protein; Validated

Probab=96.58  E-value=0.056  Score=45.29  Aligned_cols=107  Identities=11%  Similarity=0.128  Sum_probs=62.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchh----------------h-hhhccCccCc--eEEEEccC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVG----------------F-LWELNGAEER--LKIMKADL   61 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~----------------~-~~~~~~~~~~--~~~~~~D~   61 (305)
                      .+|+|+|+ |.+|+++++.|+..|. ++++++.+.-..+...                . ...+...++.  ++.+...+
T Consensus        28 s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~~~l  106 (287)
T PRK08223         28 SRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFPEGI  106 (287)
T ss_pred             CCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEeccc
Confidence            57999996 9999999999999995 6777765432111100                0 0011111233  44444444


Q ss_pred             CCcchHHHHhcCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccce
Q 039049           62 LMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCS  127 (305)
Q Consensus        62 ~d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  127 (305)
                      . .+...++++++|+||.+.-..               +...-..+.++|.+. ++ .+|+.|...
T Consensus       107 ~-~~n~~~ll~~~DlVvD~~D~~---------------~~~~r~~ln~~c~~~-~i-P~V~~~~~g  154 (287)
T PRK08223        107 G-KENADAFLDGVDVYVDGLDFF---------------EFDARRLVFAACQQR-GI-PALTAAPLG  154 (287)
T ss_pred             C-ccCHHHHHhCCCEEEECCCCC---------------cHHHHHHHHHHHHHc-CC-CEEEEeccC
Confidence            3 455777888999998653211               011133555678887 74 577765433

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.58  E-value=0.04  Score=46.92  Aligned_cols=107  Identities=21%  Similarity=0.242  Sum_probs=64.0

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccch--------------------hhhhhccCccCceEEEEccC
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKV--------------------GFLWELNGAEERLKIMKADL   61 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~D~   61 (305)
                      +|+|+|+ |.+|.++++.|+..|. ++++++.+.-..+..                    ..+..+. ..-+++.+..++
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lN-p~v~V~~~~~~i   78 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFN-PNVKIVAYHANI   78 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHC-CCCeEEEEeccC
Confidence            6899996 9999999999999995 677776543211111                    0111110 012355555666


Q ss_pred             CCcchHHHHhcCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeee
Q 039049           62 LMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIR  130 (305)
Q Consensus        62 ~d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~  130 (305)
                      .+.....+.++++|+||.+.-.                 ...-..+-+.|... ++ .||..++.+.+|
T Consensus        79 ~~~~~~~~f~~~~DvVv~a~Dn-----------------~~ar~~in~~c~~~-~i-p~I~~gt~G~~G  128 (312)
T cd01489          79 KDPDFNVEFFKQFDLVFNALDN-----------------LAARRHVNKMCLAA-DV-PLIESGTTGFLG  128 (312)
T ss_pred             CCccchHHHHhcCCEEEECCCC-----------------HHHHHHHHHHHHHC-CC-CEEEEecCccee
Confidence            6543344667889999977422                 11233455667776 64 577777655444

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.57  E-value=0.0059  Score=52.37  Aligned_cols=38  Identities=16%  Similarity=0.206  Sum_probs=33.2

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCccc
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLS   39 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~   39 (305)
                      +++|.|+|+ |.+|..++..|++.|++|++++++++...
T Consensus         4 ~~~I~vIGa-G~mG~~iA~~l~~~g~~V~~~d~~~~~~~   41 (311)
T PRK06130          4 IQNLAIIGA-GTMGSGIAALFARKGLQVVLIDVMEGALE   41 (311)
T ss_pred             ccEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHH
Confidence            468999996 99999999999999999999998876433

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.55  E-value=0.024  Score=48.52  Aligned_cols=65  Identities=9%  Similarity=0.133  Sum_probs=49.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      ++|.|+| .|-||+.+++.|..-|.+|++.+|......             .+...    ...+++.++++++|+|+.+.
T Consensus       137 ~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~~-------------~~~~~----~~~~~l~e~l~~aDvvv~~l  198 (312)
T PRK15469        137 FTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSWP-------------GVQSF----AGREELSAFLSQTRVLINLL  198 (312)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCCC-------------Cceee----cccccHHHHHhcCCEEEECC
Confidence            6899999 699999999999999999999987654211             11111    12456889999999999887


Q ss_pred             ccc
Q 039049           82 SPV   84 (305)
Q Consensus        82 ~~~   84 (305)
                      ...
T Consensus       199 Plt  201 (312)
T PRK15469        199 PNT  201 (312)
T ss_pred             CCC
Confidence            653

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=96.54  E-value=0.0091  Score=50.34  Aligned_cols=35  Identities=26%  Similarity=0.306  Sum_probs=31.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCc
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPED   37 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~   37 (305)
                      |+|.|+| .|.+|..++..|.+.|++|++.+|+++.
T Consensus         1 m~I~IIG-~G~mG~sla~~L~~~g~~V~~~d~~~~~   35 (279)
T PRK07417          1 MKIGIVG-LGLIGGSLGLDLRSLGHTVYGVSRREST   35 (279)
T ss_pred             CeEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            4799998 6999999999999999999999987653

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.54  E-value=0.0068  Score=51.15  Aligned_cols=75  Identities=20%  Similarity=0.212  Sum_probs=49.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ++++|+|+ |..|++++..|++.|. +|++++|+.++.......  .....+...+..     .+.+.+.+.++|+|||+
T Consensus       128 k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~--l~~~~~~~~~~~-----~~~~~~~~~~aDiVIna  199 (284)
T PRK12549        128 ERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADE--LNARFPAARATA-----GSDLAAALAAADGLVHA  199 (284)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHH--HHhhCCCeEEEe-----ccchHhhhCCCCEEEEC
Confidence            57999996 8899999999999996 799999987654433211  111111122211     12344556789999999


Q ss_pred             cccc
Q 039049           81 ASPV   84 (305)
Q Consensus        81 a~~~   84 (305)
                      ....
T Consensus       200 Tp~G  203 (284)
T PRK12549        200 TPTG  203 (284)
T ss_pred             CcCC
Confidence            5443

>PRK08328 hypothetical protein; Provisional

Probab=96.53  E-value=0.037  Score=45.17  Aligned_cols=109  Identities=17%  Similarity=0.233  Sum_probs=63.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhh--------h----------hhccCccC--ceEEEEcc
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGF--------L----------WELNGAEE--RLKIMKAD   60 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~--------~----------~~~~~~~~--~~~~~~~D   60 (305)
                      .+|+|+|+ |.+|+++++.|+..|. ++++++.+.-..+....        .          ..+...++  .++.+...
T Consensus        28 ~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~~~~  106 (231)
T PRK08328         28 AKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETFVGR  106 (231)
T ss_pred             CcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEEecc
Confidence            57999995 9999999999999995 77777654321111100        0          00111122  23343444


Q ss_pred             CCCcchHHHHhcCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeec
Q 039049           61 LLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRY  131 (305)
Q Consensus        61 ~~d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~  131 (305)
                      + +.+.+.++++++|+||.+.-...                 .-..+.+.|++. ++ .+|+.++.+.++.
T Consensus       107 ~-~~~~~~~~l~~~D~Vid~~d~~~-----------------~r~~l~~~~~~~-~i-p~i~g~~~g~~G~  157 (231)
T PRK08328        107 L-SEENIDEVLKGVDVIVDCLDNFE-----------------TRYLLDDYAHKK-GI-PLVHGAVEGTYGQ  157 (231)
T ss_pred             C-CHHHHHHHHhcCCEEEECCCCHH-----------------HHHHHHHHHHHc-CC-CEEEEeeccCEEE
Confidence            4 34556677889999998753311                 122344567777 64 5888776655443

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.52  E-value=0.057  Score=42.99  Aligned_cols=77  Identities=16%  Similarity=0.251  Sum_probs=49.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeC---CCcccchhh------------hh-hccCccC--ceEEEEccCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRD---PEDLSKVGF------------LW-ELNGAEE--RLKIMKADLL   62 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~---~~~~~~~~~------------~~-~~~~~~~--~~~~~~~D~~   62 (305)
                      ++|+|.|+ |.+|+.++..|+..|. ++++++++   .+.......            .. .+...++  +++.+..++.
T Consensus        22 ~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~~i~  100 (200)
T TIGR02354        22 ATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDEKIT  100 (200)
T ss_pred             CcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeeeeCC
Confidence            57999997 9999999999999997 69998877   322111000            00 0001111  3444444553


Q ss_pred             CcchHHHHhcCCCEEEEe
Q 039049           63 MEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus        63 d~~~~~~~~~~~d~Vi~~   80 (305)
                       .+.+.+.++++|+||.+
T Consensus       101 -~~~~~~~~~~~DlVi~a  117 (200)
T TIGR02354       101 -EENIDKFFKDADIVCEA  117 (200)
T ss_pred             -HhHHHHHhcCCCEEEEC
Confidence             45577778899999977

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.49  E-value=0.0038  Score=55.43  Aligned_cols=72  Identities=11%  Similarity=0.074  Sum_probs=51.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ++|+|+|+ |-+|+.++++|...|. ++++.+|+..+....   ....+   ...     ....+++.+.+.++|+||++
T Consensus       182 kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~L---a~~~~---~~~-----~~~~~~l~~~l~~aDiVI~a  249 (414)
T PRK13940        182 KNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKI---TSAFR---NAS-----AHYLSELPQLIKKADIIIAA  249 (414)
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH---HHHhc---CCe-----EecHHHHHHHhccCCEEEEC
Confidence            68999996 9999999999999994 799999986543322   21111   111     22234567778899999999


Q ss_pred             ccccc
Q 039049           81 ASPVL   85 (305)
Q Consensus        81 a~~~~   85 (305)
                      .+...
T Consensus       250 T~a~~  254 (414)
T PRK13940        250 VNVLE  254 (414)
T ss_pred             cCCCC
Confidence            87755

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.48  E-value=0.016  Score=49.94  Aligned_cols=94  Identities=18%  Similarity=0.221  Sum_probs=54.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHH-cCCe---EEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLD-KGHM---VRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGV   77 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~-~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~V   77 (305)
                      ++|.|+||||++|+.+++.|.. ...+   +..+....+.-...    ....  ..+.+...   +++    .+.++|+|
T Consensus         6 ~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~----~~~~--~~l~v~~~---~~~----~~~~~Div   72 (347)
T PRK06728          6 YHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTV----QFKG--REIIIQEA---KIN----SFEGVDIA   72 (347)
T ss_pred             CEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCe----eeCC--cceEEEeC---CHH----HhcCCCEE
Confidence            4799999999999999999985 5566   55554332211111    1111  12222222   222    23678999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEecccee
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSS  128 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~  128 (305)
                      |-+++...                  ...+...+.+. | ..+|=.||..-
T Consensus        73 f~a~~~~~------------------s~~~~~~~~~~-G-~~VID~Ss~fR  103 (347)
T PRK06728         73 FFSAGGEV------------------SRQFVNQAVSS-G-AIVIDNTSEYR  103 (347)
T ss_pred             EECCChHH------------------HHHHHHHHHHC-C-CEEEECchhhc
Confidence            98775422                  34455555555 6 36777777653

>TIGR00036 dapB dihydrodipicolinate reductase

Probab=96.48  E-value=0.024  Score=47.32  Aligned_cols=33  Identities=24%  Similarity=0.374  Sum_probs=28.7

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHH-cCCeEEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLD-KGHMVRTTVR   33 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~-~g~~V~~~~r   33 (305)
                      |++|.|+|++|.+|+.+++.+.+ .+.++.++..
T Consensus         1 ~ikV~IiGa~G~MG~~i~~~i~~~~~~elvav~d   34 (266)
T TIGR00036         1 TIKVAVAGAAGRMGRELIKAALAAEGLQLVAAFE   34 (266)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence            78999999999999999999986 4678887654

>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]

Probab=96.44  E-value=0.004  Score=53.30  Aligned_cols=76  Identities=17%  Similarity=0.183  Sum_probs=59.7

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcC-CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcc-hHHHHhcCCCEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKG-HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG-SFDEAIQGVDGVF   78 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~-~~~~~~~~~d~Vi   78 (305)
                      |++||+.|+ ||+.+.+++.|++++ .+|++.+|...+.+...       ...+++.+..|+.+.+ .+.+...+.|.|+
T Consensus         2 ~~~vlllgs-g~v~~p~~d~ls~~~dv~vtva~~~~~~~~~~~-------~~~~~~av~ldv~~~~~~L~~~v~~~D~vi   73 (445)
T KOG0172|consen    2 KKGVLLLGS-GFVSRPVADFLSRKKDVNVTVASRTLKDAEALV-------KGINIKAVSLDVADEELALRKEVKPLDLVI   73 (445)
T ss_pred             CcceEEecC-ccccchHHHHHhhcCCceEEEehhhHHHHHHHh-------cCCCccceEEEccchHHHHHhhhcccceee
Confidence            578999995 999999999999876 58998888765433221       1336889999999988 7888888999999


Q ss_pred             Eecccc
Q 039049           79 HTASPV   84 (305)
Q Consensus        79 ~~a~~~   84 (305)
                      -+-...
T Consensus        74 SLlP~t   79 (445)
T KOG0172|consen   74 SLLPYT   79 (445)
T ss_pred             eeccch
Confidence            876543

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.43  E-value=0.035  Score=45.79  Aligned_cols=104  Identities=19%  Similarity=0.164  Sum_probs=61.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccch----------------hh-hhhccCccCc--eEEEEccC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKV----------------GF-LWELNGAEER--LKIMKADL   61 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~----------------~~-~~~~~~~~~~--~~~~~~D~   61 (305)
                      ++|+|+|+ |.+|+++++.|+..|. ++++++.+.-..+..                .. ...+...++.  ++.+...+
T Consensus        33 ~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~~~i  111 (245)
T PRK05690         33 ARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETINARL  111 (245)
T ss_pred             CeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEeccC
Confidence            57999997 9999999999999995 777776542211111                00 0011111223  34444444


Q ss_pred             CCcchHHHHhcCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccc
Q 039049           62 LMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSC  126 (305)
Q Consensus        62 ~d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~  126 (305)
                      . .+.+.+.+.++|+||.+....         .        .-..+.+.|.+. ++ .+|+.++.
T Consensus       112 ~-~~~~~~~~~~~DiVi~~~D~~---------~--------~r~~ln~~~~~~-~i-p~v~~~~~  156 (245)
T PRK05690        112 D-DDELAALIAGHDLVLDCTDNV---------A--------TRNQLNRACFAA-KK-PLVSGAAI  156 (245)
T ss_pred             C-HHHHHHHHhcCCEEEecCCCH---------H--------HHHHHHHHHHHh-CC-EEEEeeec
Confidence            3 345667788999999885321         1        123455667777 64 57775543

>PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=96.43  E-value=0.025  Score=49.02  Aligned_cols=103  Identities=15%  Similarity=0.157  Sum_probs=58.6

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHc-CCeEEEEEeCCCcccchhhhhhccCc-----cC-ceEEEE-ccCCCcchHHHHhc
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDK-GHMVRTTVRDPEDLSKVGFLWELNGA-----EE-RLKIMK-ADLLMEGSFDEAIQ   72 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~-----~~-~~~~~~-~D~~d~~~~~~~~~   72 (305)
                      |+||.|.|. |-||+.+++.+.+. +.++.++.....  .....+....+.     .+ ....+. .++.-...+..++.
T Consensus         1 ~ikVaI~G~-GrIGr~va~al~~~~d~eLvav~d~~~--~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~V~~~~~el~~   77 (341)
T PRK04207          1 MIKVGVNGY-GTIGKRVADAVAAQPDMELVGVAKTKP--DYEARVAVEKGYPLYVADPEREKAFEEAGIPVAGTIEDLLE   77 (341)
T ss_pred             CeEEEEECC-CHHHHHHHHHHhcCCCcEEEEEECCCh--HHHHHHHHhcCCCccccCccccccccCCceEEcCChhHhhc
Confidence            789999998 99999999998865 468888875322  111111110000     00 000000 01111123455667


Q ss_pred             CCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccc
Q 039049           73 GVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSC  126 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~  126 (305)
                      ++|+||.|.+...                  .....+.+.++ | +++|+.++.
T Consensus        78 ~vDVVIdaT~~~~------------------~~e~a~~~~~a-G-k~VI~~~~~  111 (341)
T PRK04207         78 KADIVVDATPGGV------------------GAKNKELYEKA-G-VKAIFQGGE  111 (341)
T ss_pred             cCCEEEECCCchh------------------hHHHHHHHHHC-C-CEEEEcCCC
Confidence            8999999976533                  23445566777 7 677777764

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.43  E-value=0.013  Score=50.90  Aligned_cols=75  Identities=21%  Similarity=0.164  Sum_probs=48.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc----CCCEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ----GVDGV   77 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----~~d~V   77 (305)
                      +.|||.||+|.+|+..++.+...|..+++..++.++.+-...+        +. -...|..+++..++..+    ++|+|
T Consensus       159 ~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~l--------GA-d~vvdy~~~~~~e~~kk~~~~~~DvV  229 (347)
T KOG1198|consen  159 KSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKL--------GA-DEVVDYKDENVVELIKKYTGKGVDVV  229 (347)
T ss_pred             CeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHc--------CC-cEeecCCCHHHHHHHHhhcCCCccEE
Confidence            5799999999999999998888884444444554433221111        11 11235555544444443    59999


Q ss_pred             EEeccccc
Q 039049           78 FHTASPVL   85 (305)
Q Consensus        78 i~~a~~~~   85 (305)
                      ++|++...
T Consensus       230 lD~vg~~~  237 (347)
T KOG1198|consen  230 LDCVGGST  237 (347)
T ss_pred             EECCCCCc
Confidence            99998853

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.42  E-value=0.04  Score=45.27  Aligned_cols=105  Identities=18%  Similarity=0.131  Sum_probs=61.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhh--h---------------hhccCccCceE--EEEccC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGF--L---------------WELNGAEERLK--IMKADL   61 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~--~---------------~~~~~~~~~~~--~~~~D~   61 (305)
                      .+|+|.|+ |.+|+++++.|+..|. ++++++.+.-..+....  +               ..+...++.++  .+...+
T Consensus        25 ~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~~i  103 (240)
T TIGR02355        25 SRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINAKL  103 (240)
T ss_pred             CcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEeccC
Confidence            47999996 9999999999999995 77777665322211110  0               01111122333  333333


Q ss_pred             CCcchHHHHhcCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccce
Q 039049           62 LMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCS  127 (305)
Q Consensus        62 ~d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  127 (305)
                       +.+.+.++++++|+||.+.-..         .        ....+-+.|.+. ++ .+|+.++..
T Consensus       104 -~~~~~~~~~~~~DlVvd~~D~~---------~--------~r~~ln~~~~~~-~i-p~v~~~~~g  149 (240)
T TIGR02355       104 -DDAELAALIAEHDIVVDCTDNV---------E--------VRNQLNRQCFAA-KV-PLVSGAAIR  149 (240)
T ss_pred             -CHHHHHHHhhcCCEEEEcCCCH---------H--------HHHHHHHHHHHc-CC-CEEEEEecc
Confidence             3345677788999999875331         1        123455677777 64 577765543

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.40  E-value=0.0037  Score=55.77  Aligned_cols=71  Identities=17%  Similarity=0.149  Sum_probs=49.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC-CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG-HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ++|+|+|+ |-+|..+++.|...| .+|++.+|+.++.....   ...    +...+     +.+++.+.+.++|+||.+
T Consensus       181 ~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la---~~~----g~~~i-----~~~~l~~~l~~aDvVi~a  247 (417)
T TIGR01035       181 KKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLA---KEL----GGEAV-----KFEDLEEYLAEADIVISS  247 (417)
T ss_pred             CEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH---HHc----CCeEe-----eHHHHHHHHhhCCEEEEC
Confidence            57999996 999999999999999 78999999875432221   111    11112     223566777899999998


Q ss_pred             ccccc
Q 039049           81 ASPVL   85 (305)
Q Consensus        81 a~~~~   85 (305)
                      .+...
T Consensus       248 T~s~~  252 (417)
T TIGR01035       248 TGAPH  252 (417)
T ss_pred             CCCCC
Confidence            65543

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=96.39  E-value=0.0087  Score=54.75  Aligned_cols=80  Identities=20%  Similarity=0.203  Sum_probs=49.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhh-hh---ccCccCceEEE-EccCCCcchHHHHhcCCCE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFL-WE---LNGAEERLKIM-KADLLMEGSFDEAIQGVDG   76 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~-~~---~~~~~~~~~~~-~~D~~d~~~~~~~~~~~d~   76 (305)
                      |+|.|+|+ |.+|+.++..|++.|++|++.+++++........ ..   ........... .+.+.-.+++.++++++|+
T Consensus         5 ~kIavIG~-G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~aD~   83 (495)
T PRK07531          5 MKAACIGG-GVIGGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGADW   83 (495)
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCCCE
Confidence            68999985 9999999999999999999999987654322110 00   00000000000 0112222356677889999


Q ss_pred             EEEecc
Q 039049           77 VFHTAS   82 (305)
Q Consensus        77 Vi~~a~   82 (305)
                      ||-+..
T Consensus        84 Vieavp   89 (495)
T PRK07531         84 IQESVP   89 (495)
T ss_pred             EEEcCc
Confidence            997653

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=96.38  E-value=0.017  Score=49.03  Aligned_cols=26  Identities=23%  Similarity=0.321  Sum_probs=23.7

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGH   26 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~   26 (305)
                      |++|.|.||||.+|+.+++.|.++..
T Consensus         1 ~~~VavvGATG~VG~~~~~~L~e~~f   26 (334)
T COG0136           1 KLNVAVLGATGAVGQVLLELLEERHF   26 (334)
T ss_pred             CcEEEEEeccchHHHHHHHHHHhcCC
Confidence            68999999999999999999998653

>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2

Probab=96.38  E-value=0.014  Score=51.56  Aligned_cols=68  Identities=12%  Similarity=0.097  Sum_probs=51.7

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEEEe
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVFHT   80 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi~~   80 (305)
                      ||+|+|+ |..|..+++.+.+.|++|++++.++......  +      . . ..+..|..|.+.+.++++  ++|.|+-.
T Consensus         1 kililG~-g~~~~~l~~aa~~~G~~v~~~d~~~~~~~~~--~------a-d-~~~~~~~~d~~~l~~~~~~~~id~v~~~   69 (380)
T TIGR01142         1 RVLLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQ--V------A-H-RSYVINMLDGDALRAVIEREKPDYIVPE   69 (380)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhh--h------C-c-eEEEcCCCCHHHHHHHHHHhCCCEEEec
Confidence            6899996 9999999999999999999998876432210  0      0 1 345678888888888876  79998854


Q ss_pred             c
Q 039049           81 A   81 (305)
Q Consensus        81 a   81 (305)
                      .
T Consensus        70 ~   70 (380)
T TIGR01142        70 I   70 (380)
T ss_pred             c
Confidence            3

This enzyme is an alternative to PurN (TIGR00639)

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.38  E-value=0.037  Score=48.30  Aligned_cols=105  Identities=12%  Similarity=0.075  Sum_probs=62.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhh-----------------hhhccCccCc--eEEEEccC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGF-----------------LWELNGAEER--LKIMKADL   61 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~-----------------~~~~~~~~~~--~~~~~~D~   61 (305)
                      .+|+|+|+ |.+|+++++.|+..|. ++++++.+.-..+....                 ...+...++.  ++.+...+
T Consensus        29 ~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~~~i  107 (355)
T PRK05597         29 AKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSVRRL  107 (355)
T ss_pred             CeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEEeec
Confidence            57999996 9999999999999995 77777665321111100                 0011111223  44444444


Q ss_pred             CCcchHHHHhcCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccce
Q 039049           62 LMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCS  127 (305)
Q Consensus        62 ~d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  127 (305)
                      . .+...+.++++|+||.+....         .        .-..+.++|.+. ++ .+|+.++.+
T Consensus       108 ~-~~~~~~~~~~~DvVvd~~d~~---------~--------~r~~~n~~c~~~-~i-p~v~~~~~g  153 (355)
T PRK05597        108 T-WSNALDELRDADVILDGSDNF---------D--------TRHLASWAAARL-GI-PHVWASILG  153 (355)
T ss_pred             C-HHHHHHHHhCCCEEEECCCCH---------H--------HHHHHHHHHHHc-CC-CEEEEEEec
Confidence            3 345567788999999885321         1        122345567777 65 488776544

>PRK06849 hypothetical protein; Provisional

Probab=96.37  E-value=0.013  Score=51.93  Aligned_cols=36  Identities=19%  Similarity=0.138  Sum_probs=32.9

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPE   36 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~   36 (305)
                      +|+|||||+...+|.++++.|.+.|++|++++.++.
T Consensus         4 ~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~   39 (389)
T PRK06849          4 KKTVLITGARAPAALELARLFHNAGHTVILADSLKY   39 (389)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch
Confidence            478999999999999999999999999999987754

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.36  E-value=0.017  Score=48.46  Aligned_cols=98  Identities=14%  Similarity=0.069  Sum_probs=64.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCccc-chhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLS-KVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      +.+.|+|+.| +|.-=++...+-|++|++++++..+.+ ....|        +.+.+..-..|++.++++.+-.|.++|+
T Consensus       183 ~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~L--------GAd~fv~~~~d~d~~~~~~~~~dg~~~~  253 (360)
T KOG0023|consen  183 KWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSL--------GADVFVDSTEDPDIMKAIMKTTDGGIDT  253 (360)
T ss_pred             cEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhc--------CcceeEEecCCHHHHHHHHHhhcCccee
Confidence            6799999988 998888888788999999999874332 22222        3444443344777777777766777777


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccc
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSC  126 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~  126 (305)
                      +.....    .+           ...+++.++..   .++|+++-.
T Consensus       254 v~~~a~----~~-----------~~~~~~~lk~~---Gt~V~vg~p  281 (360)
T KOG0023|consen  254 VSNLAE----HA-----------LEPLLGLLKVN---GTLVLVGLP  281 (360)
T ss_pred             eeeccc----cc-----------hHHHHHHhhcC---CEEEEEeCc
Confidence            653321    11           22345555554   478887754

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=96.36  E-value=0.012  Score=50.27  Aligned_cols=35  Identities=26%  Similarity=0.322  Sum_probs=31.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCc
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPED   37 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~   37 (305)
                      |+|+|+|+ |-+|..++..|++.|++|+++.|+++.
T Consensus         1 m~I~IiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~   35 (304)
T PRK06522          1 MKIAILGA-GAIGGLFGAALAQAGHDVTLVARRGAH   35 (304)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECChHH
Confidence            57999996 999999999999999999999997543

>PRK13304 L-aspartate dehydrogenase; Reviewed

Probab=96.36  E-value=0.016  Score=48.40  Aligned_cols=68  Identities=28%  Similarity=0.235  Sum_probs=42.6

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHc--CCeEEEE-EeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDK--GHMVRTT-VRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGV   77 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~--g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~V   77 (305)
                      ||+|.|+| .|.+|+.+++.|.+.  +.++.++ +|++++...   +....    +.       .-.+++.+++.++|+|
T Consensus         1 mmrIgIIG-~G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~---~a~~~----~~-------~~~~~~~ell~~~DvV   65 (265)
T PRK13304          1 MLKIGIVG-CGAIASLITKAILSGRINAELYAFYDRNLEKAEN---LASKT----GA-------KACLSIDELVEDVDLV   65 (265)
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHH---HHHhc----CC-------eeECCHHHHhcCCCEE
Confidence            78999999 599999999999876  3565544 444332211   11100    11       1123455666789999


Q ss_pred             EEeccc
Q 039049           78 FHTASP   83 (305)
Q Consensus        78 i~~a~~   83 (305)
                      +.|+..
T Consensus        66 vi~a~~   71 (265)
T PRK13304         66 VECASV   71 (265)
T ss_pred             EEcCCh
Confidence            999754

>PRK13243 glyoxylate reductase; Reviewed

Probab=96.34  E-value=0.0088  Score=51.71  Aligned_cols=64  Identities=13%  Similarity=0.001  Sum_probs=46.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      ++|.|+|- |-||+.+++.|...|.+|++.+|++..... .    ..    ++        ...++.++++++|+|+.+.
T Consensus       151 ktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~-~----~~----~~--------~~~~l~ell~~aDiV~l~l  212 (333)
T PRK13243        151 KTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKPEAE-K----EL----GA--------EYRPLEELLRESDFVSLHV  212 (333)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCChhhH-H----Hc----CC--------EecCHHHHHhhCCEEEEeC
Confidence            68999994 999999999999999999999886542110 0    00    11        1235778888999999887


Q ss_pred             cc
Q 039049           82 SP   83 (305)
Q Consensus        82 ~~   83 (305)
                      ..
T Consensus       213 P~  214 (333)
T PRK13243        213 PL  214 (333)
T ss_pred             CC
Confidence            55

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.33  E-value=0.0053  Score=52.59  Aligned_cols=71  Identities=17%  Similarity=0.116  Sum_probs=49.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC-CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG-HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ++|+|+|+ |-+|+.+++.|...| .+|++.+|++++.....   ...    +...+     +.+++.+.+.++|+||.+
T Consensus       179 ~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la---~~~----g~~~~-----~~~~~~~~l~~aDvVi~a  245 (311)
T cd05213         179 KKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELA---KEL----GGNAV-----PLDELLELLNEADVVISA  245 (311)
T ss_pred             CEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH---HHc----CCeEE-----eHHHHHHHHhcCCEEEEC
Confidence            68999996 999999999998866 68999999875432221   111    11221     223466777889999998


Q ss_pred             ccccc
Q 039049           81 ASPVL   85 (305)
Q Consensus        81 a~~~~   85 (305)
                      .+...
T Consensus       246 t~~~~  250 (311)
T cd05213         246 TGAPH  250 (311)
T ss_pred             CCCCc
Confidence            77644

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK08818 prephenate dehydrogenase; Provisional

Probab=96.33  E-value=0.014  Score=51.01  Aligned_cols=33  Identities=18%  Similarity=0.160  Sum_probs=29.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHc-CCeEEEEEeC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDK-GHMVRTTVRD   34 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~-g~~V~~~~r~   34 (305)
                      ++|+|+|.+|.||..+++.|.+. |++|+++++.
T Consensus         5 ~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~   38 (370)
T PRK08818          5 PVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPA   38 (370)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCC
Confidence            68999999999999999999875 7899888764

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=96.32  E-value=0.036  Score=44.66  Aligned_cols=106  Identities=18%  Similarity=0.334  Sum_probs=67.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcc----------------cchhhhh-hccCccCceEEEEc-cCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDL----------------SKVGFLW-ELNGAEERLKIMKA-DLL   62 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~----------------~~~~~~~-~~~~~~~~~~~~~~-D~~   62 (305)
                      .+|+|+|. |.+|++.++.|+..|. ++++++-+.-..                ++..-+. .....++.++.... |+-
T Consensus        31 ~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f~  109 (263)
T COG1179          31 AHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDFI  109 (263)
T ss_pred             CcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhhh
Confidence            46999996 9999999999999985 677665432111                0111111 11222445665553 566


Q ss_pred             CcchHHHHhc-CCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceee
Q 039049           63 MEGSFDEAIQ-GVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSI  129 (305)
Q Consensus        63 d~~~~~~~~~-~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~  129 (305)
                      .++.+.+++. ++|+||.+.-.                 +..-..|+++|.++ ++   -++||+++-
T Consensus       110 t~en~~~~~~~~~DyvIDaiD~-----------------v~~Kv~Li~~c~~~-ki---~vIss~Gag  156 (263)
T COG1179         110 TEENLEDLLSKGFDYVIDAIDS-----------------VRAKVALIAYCRRN-KI---PVISSMGAG  156 (263)
T ss_pred             CHhHHHHHhcCCCCEEEEchhh-----------------hHHHHHHHHHHHHc-CC---CEEeecccc
Confidence            7777888775 69999987432                 33455788889988 54   455666643

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.31  E-value=0.018  Score=49.62  Aligned_cols=77  Identities=26%  Similarity=0.296  Sum_probs=46.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi~   79 (305)
                      .+|||+||+|.+|+..++.+...|..+++.+.+.++...   +..+ +...-+.+...|+  .+.+.++..  ++|+|+.
T Consensus       144 ~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~---~~~l-GAd~vi~y~~~~~--~~~v~~~t~g~gvDvv~D  217 (326)
T COG0604         144 ETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLEL---LKEL-GADHVINYREEDF--VEQVRELTGGKGVDVVLD  217 (326)
T ss_pred             CEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHH---HHhc-CCCEEEcCCcccH--HHHHHHHcCCCCceEEEE
Confidence            579999999999999999999999776666665543221   1111 1000111111121  223444443  5899999


Q ss_pred             ecccc
Q 039049           80 TASPV   84 (305)
Q Consensus        80 ~a~~~   84 (305)
                      ..+..
T Consensus       218 ~vG~~  222 (326)
T COG0604         218 TVGGD  222 (326)
T ss_pred             CCCHH
Confidence            87763

>PRK12409 D-amino acid dehydrogenase small subunit; Provisional

Probab=96.31  E-value=0.0062  Score=54.40  Aligned_cols=34  Identities=26%  Similarity=0.328  Sum_probs=32.0

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDP   35 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~   35 (305)
                      |.+|+|+|| |++|..++.+|++.|++|+++.|..
T Consensus         1 ~~~vvIIGa-G~~G~~~A~~La~~g~~V~vle~~~   34 (410)
T PRK12409          1 MSHIAVIGA-GITGVTTAYALAQRGYQVTVFDRHR   34 (410)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCC
Confidence            789999997 9999999999999999999998875

>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional

Probab=96.31  E-value=0.012  Score=52.68  Aligned_cols=38  Identities=11%  Similarity=0.143  Sum_probs=32.2

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccc
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSK   40 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~   40 (305)
                      +|+|.|+| .|++|..++..|++ |++|+++++++.+.+.
T Consensus         6 ~mkI~vIG-lGyvGlpmA~~la~-~~~V~g~D~~~~~ve~   43 (425)
T PRK15182          6 EVKIAIIG-LGYVGLPLAVEFGK-SRQVVGFDVNKKRILE   43 (425)
T ss_pred             CCeEEEEC-cCcchHHHHHHHhc-CCEEEEEeCCHHHHHH
Confidence            37899998 79999999999876 6999999998875443

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=96.29  E-value=0.023  Score=48.45  Aligned_cols=36  Identities=22%  Similarity=0.363  Sum_probs=32.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcc
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDL   38 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~   38 (305)
                      |+|.|+| .|-+|..+++.|++.|++|.+.+|+++..
T Consensus         1 M~Ig~IG-lG~mG~~la~~L~~~g~~V~~~dr~~~~~   36 (298)
T TIGR00872         1 MQLGLIG-LGRMGANIVRRLAKRGHDCVGYDHDQDAV   36 (298)
T ss_pred             CEEEEEc-chHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            4799999 59999999999999999999999987643

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A

Probab=96.28  E-value=0.00056  Score=43.02  Aligned_cols=43  Identities=23%  Similarity=0.194  Sum_probs=20.0

Q ss_pred             HHHhCCCCCCCCCCCCCCCCCCCcccchhHHHH-hCCCccc-cCCC
Q 039049          262 LKATYPSYPYESKCSKQEGDNSPHSMDTSKLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       262 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lg~~~~~-~l~e  305 (305)
                      +.++.|...-......++++......|++|+++ ||| +|+ +|+|
T Consensus         2 ~e~vtG~~i~~~~~~rR~GD~~~~~Ad~~kA~~~LgW-~p~~~L~~   46 (62)
T PF13950_consen    2 FEKVTGKKIPVEYAPRRPGDPAHLVADISKAREELGW-KPKYSLED   46 (62)
T ss_dssp             HHHHHTS---EEEE---TT--SEE-B--HHHHHHC-----SSSHHH
T ss_pred             cHHHHCCCCCceECCCCCCchhhhhCCHHHHHHHhCC-CcCCCHHH
Confidence            345555432222345689999999999999999 999 998 8764

...

>PRK07574 formate dehydrogenase; Provisional

Probab=96.27  E-value=0.023  Score=49.92  Aligned_cols=66  Identities=18%  Similarity=0.056  Sum_probs=47.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      |+|.|+| .|-||+.+++.|..-|.+|++.+|..........               .++.-..++.++++++|+|+.+.
T Consensus       193 ktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~---------------~g~~~~~~l~ell~~aDvV~l~l  256 (385)
T PRK07574        193 MTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQE---------------LGLTYHVSFDSLVSVCDVVTIHC  256 (385)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCCchhhHhh---------------cCceecCCHHHHhhcCCEEEEcC
Confidence            6899999 5999999999999999999999887532111000               01111235788899999999887


Q ss_pred             cc
Q 039049           82 SP   83 (305)
Q Consensus        82 ~~   83 (305)
                      ..
T Consensus       257 Pl  258 (385)
T PRK07574        257 PL  258 (385)
T ss_pred             CC
Confidence            65

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=96.26  E-value=0.0088  Score=50.76  Aligned_cols=64  Identities=14%  Similarity=0.183  Sum_probs=45.4

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEecc
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTAS   82 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a~   82 (305)
                      +|.|+| .|.+|+.+++.|++.|++|++.+|++++......   .     +       ....++..++++++|+||-+..
T Consensus         1 ~IgvIG-~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~---~-----g-------~~~~~~~~~~~~~aDivi~~vp   64 (291)
T TIGR01505         1 KVGFIG-LGIMGSPMSINLAKAGYQLHVTTIGPEVADELLA---A-----G-------AVTAETARQVTEQADVIFTMVP   64 (291)
T ss_pred             CEEEEE-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH---C-----C-------CcccCCHHHHHhcCCEEEEecC
Confidence            588998 5999999999999999999999988754332111   0     1       1112245567778899888764

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.25  E-value=0.024  Score=49.29  Aligned_cols=36  Identities=17%  Similarity=0.046  Sum_probs=31.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCc
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPED   37 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~   37 (305)
                      .+|+|+||+|-+|..+++.+...|. +|+++++++++
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~  192 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEK  192 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHH
Confidence            5799999999999999998888898 79999887653

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.25  E-value=0.0052  Score=48.98  Aligned_cols=34  Identities=24%  Similarity=0.300  Sum_probs=30.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPE   36 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~   36 (305)
                      |+|+|+|. |-+|+++++.|.+.|++|++.+++++
T Consensus        29 k~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~   62 (200)
T cd01075          29 KTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEE   62 (200)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence            68999996 89999999999999999998877654

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.24  E-value=0.017  Score=48.33  Aligned_cols=55  Identities=15%  Similarity=0.148  Sum_probs=45.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      ++|+|+|.++.+|+.++..|.++|.+|+...++.                             ..+.+.++++|+||.++
T Consensus       159 k~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t-----------------------------~~l~~~~~~ADIVIsAv  209 (286)
T PRK14175        159 KNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS-----------------------------KDMASYLKDADVIVSAV  209 (286)
T ss_pred             CEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc-----------------------------hhHHHHHhhCCEEEECC
Confidence            7899999999999999999999999999885531                             13566778899999988


Q ss_pred             cccc
Q 039049           82 SPVL   85 (305)
Q Consensus        82 ~~~~   85 (305)
                      +...
T Consensus       210 g~p~  213 (286)
T PRK14175        210 GKPG  213 (286)
T ss_pred             CCCc
Confidence            7743

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.24  E-value=0.0094  Score=50.27  Aligned_cols=76  Identities=18%  Similarity=0.101  Sum_probs=49.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ++++|+|+ |..|++++..|++.|. +|++++|+.++..+....   ......+  ..  +...+++...+.++|+|||+
T Consensus       126 k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~---~~~~~~~--~~--~~~~~~~~~~~~~~DiVIna  197 (282)
T TIGR01809       126 FRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDL---GVQVGVI--TR--LEGDSGGLAIEKAAEVLVST  197 (282)
T ss_pred             ceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHH---hhhcCcc--ee--ccchhhhhhcccCCCEEEEC
Confidence            57999996 9999999999999995 799999987654433211   1100111  11  11112344555689999999


Q ss_pred             ccccc
Q 039049           81 ASPVL   85 (305)
Q Consensus        81 a~~~~   85 (305)
                      .....
T Consensus       198 Tp~g~  202 (282)
T TIGR01809       198 VPADV  202 (282)
T ss_pred             CCCCC
Confidence            87754

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK06436 glycerate dehydrogenase; Provisional

Probab=96.24  E-value=0.023  Score=48.36  Aligned_cols=63  Identities=11%  Similarity=0.000  Sum_probs=46.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      ++|.|+| .|-||+++++.|..-|.+|++.+|+....              ++..      ...++.++++++|+|+.+.
T Consensus       123 ktvgIiG-~G~IG~~vA~~l~afG~~V~~~~r~~~~~--------------~~~~------~~~~l~ell~~aDiv~~~l  181 (303)
T PRK06436        123 KSLGILG-YGGIGRRVALLAKAFGMNIYAYTRSYVND--------------GISS------IYMEPEDIMKKSDFVLISL  181 (303)
T ss_pred             CEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCccc--------------Cccc------ccCCHHHHHhhCCEEEECC
Confidence            6899999 69999999998888899999998864310              1110      0224778888899999887


Q ss_pred             cccc
Q 039049           82 SPVL   85 (305)
Q Consensus        82 ~~~~   85 (305)
                      ....
T Consensus       182 p~t~  185 (303)
T PRK06436        182 PLTD  185 (303)
T ss_pred             CCCc
Confidence            6543

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.24  E-value=0.075  Score=43.38  Aligned_cols=106  Identities=18%  Similarity=0.159  Sum_probs=61.9

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccch--hhh---------------hhccCccC--ceEEEEccCC
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKV--GFL---------------WELNGAEE--RLKIMKADLL   62 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~--~~~---------------~~~~~~~~--~~~~~~~D~~   62 (305)
                      +|+|.|+ |.+|.++++.|+..|. ++++++.+.-..+..  +.+               ..+...++  +++.+..++.
T Consensus         1 kVlvvG~-GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~   79 (234)
T cd01484           1 KVLLVGA-GGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG   79 (234)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            5899995 9999999999999995 777776653211111  000               00011112  3555666664


Q ss_pred             CcchH-HHHhcCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEecccee
Q 039049           63 MEGSF-DEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSS  128 (305)
Q Consensus        63 d~~~~-~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~  128 (305)
                      +...+ ...++++|+||.+.-.                 ...-..+-+.|... ++ .+|..++.+-
T Consensus        80 ~~~~~~~~f~~~~DvVi~a~Dn-----------------~~aR~~ln~~c~~~-~i-plI~~g~~G~  127 (234)
T cd01484          80 PEQDFNDTFFEQFHIIVNALDN-----------------IIARRYVNGMLIFL-IV-PLIESGTEGF  127 (234)
T ss_pred             hhhhchHHHHhCCCEEEECCCC-----------------HHHHHHHHHHHHHc-CC-CEEEEcccCC
Confidence            43333 3456789999976322                 22234455667776 64 5777766543

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]

Probab=96.23  E-value=0.063  Score=43.59  Aligned_cols=96  Identities=18%  Similarity=0.156  Sum_probs=64.0

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVF   78 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi   78 (305)
                      |++|+|+|||+ =++.|++.|...+..+++.+--.......         .+......+-..+.+.+.+.++  ++|.||
T Consensus         2 ~~~ilvlGGT~-Dar~la~~L~~~~~~~~~ss~t~~g~~l~---------~~~~~~~~~G~l~~e~l~~~l~e~~i~llI   71 (257)
T COG2099           2 MMRILLLGGTS-DARALAKKLAAAPVDIILSSLTGYGAKLA---------EQIGPVRVGGFLGAEGLAAFLREEGIDLLI   71 (257)
T ss_pred             CceEEEEeccH-HHHHHHHHhhccCccEEEEEcccccccch---------hccCCeeecCcCCHHHHHHHHHHcCCCEEE
Confidence            67899999976 47999999998875444443322111100         0122345566678888998886  799999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEE
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVL  122 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~  122 (305)
                      ..--+         +.      ...+.|.+++|++. +++.+.|
T Consensus        72 DATHP---------yA------a~iS~Na~~aake~-gipy~r~   99 (257)
T COG2099          72 DATHP---------YA------ARISQNAARAAKET-GIPYLRL   99 (257)
T ss_pred             ECCCh---------HH------HHHHHHHHHHHHHh-CCcEEEE
Confidence            76433         22      34478889999998 8876655

>PRK12439 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.22  E-value=0.0086  Score=52.03  Aligned_cols=79  Identities=19%  Similarity=0.165  Sum_probs=46.2

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccC-ceEEEEccCCCcchHHHHhcCCCEEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEE-RLKIMKADLLMEGSFDEAIQGVDGVFH   79 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~d~~~~~~~~~~~d~Vi~   79 (305)
                      ||+|.|+|+ |-+|..++..|++.| +|+...|+++...............+ +.. +...+.-..++..+++++|+||-
T Consensus         7 ~mkI~IiGa-Ga~G~alA~~La~~g-~v~l~~~~~~~~~~i~~~~~~~~~l~~~~~-l~~~i~~t~d~~~a~~~aDlVil   83 (341)
T PRK12439          7 EPKVVVLGG-GSWGTTVASICARRG-PTLQWVRSAETADDINDNHRNSRYLGNDVV-LSDTLRATTDFAEAANCADVVVM   83 (341)
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCC-CEEEEeCCHHHHHHHHhcCCCcccCCCCcc-cCCCeEEECCHHHHHhcCCEEEE
Confidence            578999996 999999999999998 67788777643322211000000000 111 11112122345566778898887


Q ss_pred             ecc
Q 039049           80 TAS   82 (305)
Q Consensus        80 ~a~   82 (305)
                      +.-
T Consensus        84 avp   86 (341)
T PRK12439         84 GVP   86 (341)
T ss_pred             EeC
Confidence            654

>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain

Probab=96.22  E-value=0.056  Score=48.78  Aligned_cols=87  Identities=17%  Similarity=0.199  Sum_probs=59.9

Q ss_pred             CcEEEeCCc---chHHHHHHHHHHHcCC--eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCE
Q 039049            2 PEYCVTGGT---GFIAAHLVKALLDKGH--MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDG   76 (305)
Q Consensus         2 ~~ilItG~~---G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   76 (305)
                      ++|+|+|++   |-+|..+.+.|.+.|+  +|+.++.+..   ..                 ..+.-...+.++-+.+|.
T Consensus         8 ~siavvGaS~~~~~~g~~~~~~l~~~gf~g~v~~Vnp~~~---~i-----------------~G~~~~~sl~~lp~~~Dl   67 (447)
T TIGR02717         8 KSVAVIGASRDPGKVGYAIMKNLIEGGYKGKIYPVNPKAG---EI-----------------LGVKAYPSVLEIPDPVDL   67 (447)
T ss_pred             CEEEEEccCCCCCchHHHHHHHHHhCCCCCcEEEECCCCC---cc-----------------CCccccCCHHHCCCCCCE
Confidence            579999998   7799999999999997  6877743322   00                 011223345555567898


Q ss_pred             EEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccce
Q 039049           77 VFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCS  127 (305)
Q Consensus        77 Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  127 (305)
                      ++-+.....                  ...+++.|.+. +++.+|.+|+..
T Consensus        68 avi~vp~~~------------------~~~~l~e~~~~-gv~~~vi~s~gf   99 (447)
T TIGR02717        68 AVIVVPAKY------------------VPQVVEECGEK-GVKGAVVITAGF   99 (447)
T ss_pred             EEEecCHHH------------------HHHHHHHHHhc-CCCEEEEECCCc
Confidence            886654322                  45677788888 999999988864

Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.

>PLN00203 glutamyl-tRNA reductase

Probab=96.21  E-value=0.0082  Score=54.82  Aligned_cols=74  Identities=23%  Similarity=0.225  Sum_probs=50.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ++|+|+|+ |-+|+.++++|...|. +|++++|+.++.....   ....   ++....   ...+++.+++.++|+||.+
T Consensus       267 kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La---~~~~---g~~i~~---~~~~dl~~al~~aDVVIsA  336 (519)
T PLN00203        267 ARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALR---EEFP---DVEIIY---KPLDEMLACAAEADVVFTS  336 (519)
T ss_pred             CEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHH---HHhC---CCceEe---ecHhhHHHHHhcCCEEEEc
Confidence            67999997 9999999999999996 7999999876443322   1110   111111   2223456777899999987


Q ss_pred             ccccc
Q 039049           81 ASPVL   85 (305)
Q Consensus        81 a~~~~   85 (305)
                      .+...
T Consensus       337 T~s~~  341 (519)
T PLN00203        337 TSSET  341 (519)
T ss_pred             cCCCC
Confidence            65544

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.18  E-value=0.0058  Score=54.73  Aligned_cols=71  Identities=20%  Similarity=0.198  Sum_probs=49.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ++|+|+|+ |-+|+.+++.|...|. +|++.+|++.+.....   ...    +.     +..+.+++.+.+.++|+||.+
T Consensus       183 ~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la---~~~----g~-----~~~~~~~~~~~l~~aDvVI~a  249 (423)
T PRK00045        183 KKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELA---EEF----GG-----EAIPLDELPEALAEADIVISS  249 (423)
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHH---HHc----CC-----cEeeHHHHHHHhccCCEEEEC
Confidence            57999996 9999999999999996 7999999865432221   111    11     122234456677789999998


Q ss_pred             ccccc
Q 039049           81 ASPVL   85 (305)
Q Consensus        81 a~~~~   85 (305)
                      .+...
T Consensus       250 T~s~~  254 (423)
T PRK00045        250 TGAPH  254 (423)
T ss_pred             CCCCC
Confidence            76543

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.17  E-value=0.017  Score=48.65  Aligned_cols=55  Identities=13%  Similarity=0.078  Sum_probs=44.6

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      .|+|.|+|.+|.+|+.++..|+++|++|++..|...                             .+.++.+++|+||-+
T Consensus       159 Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~-----------------------------~l~e~~~~ADIVIsa  209 (301)
T PRK14194        159 GKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST-----------------------------DAKALCRQADIVVAA  209 (301)
T ss_pred             CCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC-----------------------------CHHHHHhcCCEEEEe
Confidence            378999999999999999999999999999855422                             255566678999988


Q ss_pred             cccc
Q 039049           81 ASPV   84 (305)
Q Consensus        81 a~~~   84 (305)
                      .+..
T Consensus       210 vg~~  213 (301)
T PRK14194        210 VGRP  213 (301)
T ss_pred             cCCh
Confidence            7764

>PRK12921 2-dehydropantoate 2-reductase; Provisional

Probab=96.17  E-value=0.017  Score=49.32  Aligned_cols=31  Identities=29%  Similarity=0.385  Sum_probs=29.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVR   33 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r   33 (305)
                      |+|+|+|+ |-+|..++..|++.|++|+++.|
T Consensus         1 mkI~IiG~-G~iG~~~a~~L~~~g~~V~~~~r   31 (305)
T PRK12921          1 MRIAVVGA-GAVGGTFGGRLLEAGRDVTFLVR   31 (305)
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCceEEEec
Confidence            57999995 99999999999999999999999

>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]

Probab=96.15  E-value=0.011  Score=49.46  Aligned_cols=69  Identities=22%  Similarity=0.281  Sum_probs=45.1

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCc---chHHHHhcCCCEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME---GSFDEAIQGVDGV   77 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~---~~~~~~~~~~d~V   77 (305)
                      |++|+|.| .|.||+.+++.|...|+.|.+++++.......             .....++.|.   +.......++|+|
T Consensus         3 ~~~v~IvG-~GliG~s~a~~l~~~g~~v~i~g~d~~~~~~~-------------~a~~lgv~d~~~~~~~~~~~~~aD~V   68 (279)
T COG0287           3 SMKVGIVG-LGLMGGSLARALKEAGLVVRIIGRDRSAATLK-------------AALELGVIDELTVAGLAEAAAEADLV   68 (279)
T ss_pred             CcEEEEEC-CchHHHHHHHHHHHcCCeEEEEeecCcHHHHH-------------HHhhcCcccccccchhhhhcccCCEE
Confidence            35666666 79999999999999999998888876532211             1112233332   1124455578999


Q ss_pred             EEeccc
Q 039049           78 FHTASP   83 (305)
Q Consensus        78 i~~a~~   83 (305)
                      |-+..+
T Consensus        69 ivavPi   74 (279)
T COG0287          69 IVAVPI   74 (279)
T ss_pred             EEeccH
Confidence            977654

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=96.15  E-value=0.039  Score=47.62  Aligned_cols=62  Identities=23%  Similarity=0.179  Sum_probs=46.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      |+|.|+| .|-||+.+++.|...|++|++.+|++.....            .+       .-..++.++++++|+|+.+.
T Consensus       147 ~~VgIIG-~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~------------~~-------~~~~~l~ell~~aDiVil~l  206 (330)
T PRK12480        147 MTVAIIG-TGRIGAATAKIYAGFGATITAYDAYPNKDLD------------FL-------TYKDSVKEAIKDADIISLHV  206 (330)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCChhHhhh------------hh-------hccCCHHHHHhcCCEEEEeC
Confidence            6899999 5999999999999999999999887642110            00       01235778888999998776


Q ss_pred             cc
Q 039049           82 SP   83 (305)
Q Consensus        82 ~~   83 (305)
                      ..
T Consensus       207 P~  208 (330)
T PRK12480        207 PA  208 (330)
T ss_pred             CC
Confidence            54

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=96.15  E-value=0.034  Score=47.94  Aligned_cols=73  Identities=21%  Similarity=0.154  Sum_probs=47.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHH---HHhc--CCCE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFD---EAIQ--GVDG   76 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~---~~~~--~~d~   76 (305)
                      .+++|+|++|-+|..+++.+...|.+|++++++.......   ...     .... ..|..+.+...   +...  ++|.
T Consensus       168 ~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~---~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~~d~  238 (342)
T cd08266         168 ETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA---KEL-----GADY-VIDYRKEDFVREVRELTGKRGVDV  238 (342)
T ss_pred             CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH---HHc-----CCCe-EEecCChHHHHHHHHHhCCCCCcE
Confidence            4799999999999999999999999999998776432221   111     1111 12444433222   2222  5899


Q ss_pred             EEEeccc
Q 039049           77 VFHTASP   83 (305)
Q Consensus        77 Vi~~a~~   83 (305)
                      ++++++.
T Consensus       239 ~i~~~g~  245 (342)
T cd08266         239 VVEHVGA  245 (342)
T ss_pred             EEECCcH
Confidence            9999874

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK13303 L-aspartate dehydrogenase; Provisional

Probab=96.13  E-value=0.032  Score=46.57  Aligned_cols=33  Identities=21%  Similarity=0.179  Sum_probs=27.3

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHc-CCeEEEEEeC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDK-GHMVRTTVRD   34 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~-g~~V~~~~r~   34 (305)
                      |+||.|+|. |.||+.+++.+.+. +.++.++...
T Consensus         1 m~rVgIiG~-G~iG~~~~~~l~~~~~~~l~~v~~~   34 (265)
T PRK13303          1 MMKVAMIGF-GAIGAAVLELLEHDPDLRVDWVIVP   34 (265)
T ss_pred             CcEEEEECC-CHHHHHHHHHHhhCCCceEEEEEEc
Confidence            889999997 99999999999876 4677666543

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.12  E-value=0.025  Score=48.69  Aligned_cols=36  Identities=17%  Similarity=0.166  Sum_probs=31.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCc
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPED   37 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~   37 (305)
                      .+|+|+||+|-+|..+++.+...|.+|+++++++++
T Consensus       145 ~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~  180 (329)
T cd08294         145 ETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDK  180 (329)
T ss_pred             CEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence            479999999999999999998899999999887653

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.12  E-value=0.021  Score=51.29  Aligned_cols=73  Identities=16%  Similarity=0.137  Sum_probs=49.7

Q ss_pred             CcEEEeCC----------------cchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcc
Q 039049            2 PEYCVTGG----------------TGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG   65 (305)
Q Consensus         2 ~~ilItG~----------------~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~   65 (305)
                      ++||||+|                ||..|.+|++.+..+|.+|+.+.-.- ...       .   ..+++.+..+  ..+
T Consensus       257 kkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~-~~~-------~---p~~v~~i~V~--ta~  323 (475)
T PRK13982        257 RRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPV-DLA-------D---PQGVKVIHVE--SAR  323 (475)
T ss_pred             CEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCc-CCC-------C---CCCceEEEec--CHH
Confidence            68999976                59999999999999999999996321 110       0   1245555543  333


Q ss_pred             hHHHHhc---CCCEEEEeccccccC
Q 039049           66 SFDEAIQ---GVDGVFHTASPVLVP   87 (305)
Q Consensus        66 ~~~~~~~---~~d~Vi~~a~~~~~~   87 (305)
                      ++.+++.   +.|++|++|+...+.
T Consensus       324 eM~~av~~~~~~Di~I~aAAVaDyr  348 (475)
T PRK13982        324 QMLAAVEAALPADIAIFAAAVADWR  348 (475)
T ss_pred             HHHHHHHhhCCCCEEEEecccccee
Confidence            3333332   479999999987654

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=96.12  E-value=0.019  Score=48.07  Aligned_cols=35  Identities=29%  Similarity=0.481  Sum_probs=32.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCc
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPED   37 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~   37 (305)
                      ++|.++| .|-.|..++.+|++.||+|++.+|++++
T Consensus         1 ~kIafIG-LG~MG~pmA~~L~~aG~~v~v~~r~~~k   35 (286)
T COG2084           1 MKIAFIG-LGIMGSPMAANLLKAGHEVTVYNRTPEK   35 (286)
T ss_pred             CeEEEEc-CchhhHHHHHHHHHCCCEEEEEeCChhh
Confidence            4788999 7999999999999999999999999876

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.10  E-value=0.16  Score=46.09  Aligned_cols=120  Identities=20%  Similarity=0.102  Sum_probs=70.2

Q ss_pred             EeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEeccccc
Q 039049            6 VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTASPVL   85 (305)
Q Consensus         6 ItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a~~~~   85 (305)
                      |+||+|-+|.++++.|...|.+|++..+.+.+...        ....++.-+..|....+....+.              
T Consensus        43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~--------~~~~~~~~~~~d~~~~~~~~~l~--------------  100 (450)
T PRK08261         43 LVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAA--------GWGDRFGALVFDATGITDPADLK--------------  100 (450)
T ss_pred             EEccCchhHHHHHHHHhhCCCeeeecCcccccccc--------CcCCcccEEEEECCCCCCHHHHH--------------
Confidence            78889999999999999999999998665431100        00112232333433322221110              


Q ss_pred             cCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHHHHHHH
Q 039049           86 VPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTI  165 (305)
Q Consensus        86 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~  165 (305)
                               ..    .......+..+.   ...+||+++|.......                        ..|+.+|..
T Consensus       101 ---------~~----~~~~~~~l~~l~---~~griv~i~s~~~~~~~------------------------~~~~~akaa  140 (450)
T PRK08261        101 ---------AL----YEFFHPVLRSLA---PCGRVVVLGRPPEAAAD------------------------PAAAAAQRA  140 (450)
T ss_pred             ---------HH----HHHHHHHHHhcc---CCCEEEEEccccccCCc------------------------hHHHHHHHH
Confidence                     00    111222232222   23589999986542110                        348999999


Q ss_pred             HHHHHHHHHHHc--CCcEEEEecC
Q 039049          166 AEKEAWRIAKDC--GIDMVVVNPS  187 (305)
Q Consensus       166 ~E~~~~~~~~~~--~~~~~i~Rp~  187 (305)
                      .+.+++.++.+.  ++.+..+.|.
T Consensus       141 l~gl~rsla~E~~~gi~v~~i~~~  164 (450)
T PRK08261        141 LEGFTRSLGKELRRGATAQLVYVA  164 (450)
T ss_pred             HHHHHHHHHHHhhcCCEEEEEecC
Confidence            999998888775  5777777665

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.09  E-value=0.034  Score=44.34  Aligned_cols=33  Identities=21%  Similarity=0.317  Sum_probs=29.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDP   35 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~   35 (305)
                      ++|+|+|| |-+|...++.|++.|.+|+++++..
T Consensus        11 k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718         11 KRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            68999997 9999999999999999999997643

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	305
2c29_D	337	Structure Of Dihydroflavonol Reductase From Vitis V		7e-53
2rh8_A	338	Structure Of Apo Anthocyanidin Reductase From Vitis		2e-46
2p4h_X	322	Crystal Structure Of Vestitone Reductase From Alfal		3e-43
1y1p_A	342	X-Ray Structure Of Aldehyde Reductase With Nadph Le		3e-23
1ujm_A	342	Crystal Structure Of Aldehyde Reductase 2 From Spor		4e-22
4ef7_B	337	Udp-Xylose Synthase Length = 337		7e-06
2b69_A	343	Crystal Structure Of Human Udp-Glucoronic Acid Deca		1e-05
1r6d_A	337	Crystal Structure Of Desiv Double Mutant (Dtdp-Gluc		3e-05
1r66_A	337	Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydr		1e-04
2gn4_A	344	Crystal Structure Of Udp-Glcnac Inverting 4,6-Dehyd		7e-04

>pdb|2C29|D Chain D, Structure Of Dihydroflavonol Reductase From Vitis Vinifera At 1.8 A. Length = 337

Iteration: 1
 Score =  203 bits (517), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 116/297 (39%), Positives = 169/297 (56%), Gaps = 7/297 (2%)
Query: 5   CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
           CVTG +GFI + LV  LL++G+ VR TVRDP ++ KV  L +L  AE  L + KADL  E
Sbjct: 9   CVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADE 68
Query: 65  GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
           GSFDEAI+G  GVFH A+P+      + +  +I P I+G L ++ SC  AK+V+R+V TS
Sbjct: 69  GSFDEAIKGCTGVFHVATPMDFE-SKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTS 127
Query: 125 SCSSIRYRHDAQQVSPLNESHWSDPDYC--KHYNLW-YAYAKTIAEKEAWRIAKDCGIDM 181
           S  ++  +    Q+   +ES WSD ++C  K    W Y  +KT+AE+ AW+ AK+  ID 
Sbjct: 128 SAGTVNIQE--HQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDF 185
Query: 182 VVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG-FVHIDDVVGAHILAMEET 240
           + + P+ VVGP +      +L+  L+ + G    Y     G FVH+DD+  AHI   E  
Sbjct: 186 ITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHIYLFENP 245
Query: 241 RASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELGF 297
           +A GR ICSS       + +ML+  YP Y   ++    + +       + KL +LGF
Sbjct: 246 KAEGRYICSSHDCIILDLAKMLREKYPEYNIPTEFKGVDENLKSVCFSSKKLTDLGF 302

>pdb|2RH8|A Chain A, Structure Of Apo Anthocyanidin Reductase From Vitis Vinifera Length = 338

Iteration: 1
 Score =  182 bits (462), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/307 (36%), Positives = 171/307 (55%), Gaps = 20/307 (6%)
Query: 5   CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
           CV GGTGF+A+ LVK LL KG+ V TTVRDP++  KV  L EL    + LKI +ADL  E
Sbjct: 13  CVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGD-LKIFRADLTDE 71
Query: 65  GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
            SF+  I G D VFH A+PV    ++  +  +I P I+G +NV+ +C +AKSVKRV+LTS
Sbjct: 72  LSFEAPIAGCDFVFHVATPVHFASEDP-ENDMIKPAIQGVVNVMKACTRAKSVKRVILTS 130
Query: 125 SCSSIRYRHDAQQVSPLNESHWSDPDYCKHYN--LW-YAYAKTIAEKEAWRIAKDCGIDM 181
           S +++           ++E +W+D ++        W Y  +KT+AEK AW+ A++  ID+
Sbjct: 131 SAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEENNIDL 190
Query: 182 VVVNPSFVVGPLLAPQPTSTLLLILA-------MVKGLRG-EYPNTTVGFVHIDDVVGAH 233
           + V P+ + G  L     S++ L ++       ++ G++G +  + +V   H++DV  AH
Sbjct: 191 ITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHVEDVCRAH 250
Query: 234 ILAMEETRASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHS---MDTS 290
           I   E+  ASGR IC ++      + + L   YP Y    K     GD  P S   + + 
Sbjct: 251 IFVAEKESASGRYICCAANTSVPELAKFLSKRYPQY----KVPTDFGDFPPKSKLIISSE 306
Query: 291 KLFELGF 297
           KL + GF
Sbjct: 307 KLVKEGF 313

>pdb|2P4H|X Chain X, Crystal Structure Of Vestitone Reductase From Alfalfa (Medicago Sativa L.) Length = 322

Iteration: 1
 Score =  172 bits (435), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 107/299 (35%), Positives = 161/299 (53%), Gaps = 10/299 (3%)
Query: 5   CVTGGTGFIAAHLVKALLDKGHMVRTTVR-DPEDLSKVGFLWELNGAEERLKIMKADLLM 63
           CVTGGTGF+ + ++K+LL+ G+ V TT+R DPE    V FL  L GA E+L    ADL  
Sbjct: 5   CVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSN 64
Query: 64  EGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLT 123
             SF  AI+G  G+FHTASP+     +  +  +    + G L +L +C  +K+VKR + T
Sbjct: 65  PDSFAAAIEGCVGIFHTASPIDFAV-SEPEEIVTKRTVDGALGILKACVNSKTVKRFIYT 123
Query: 124 SSCSSIRYRHDAQQVSPLNESHWSDPDY---CKHYNLWYAYAKTIAEKEAWRIAKDCGID 180
           SS S++ +    + V  L+ES WSD D     K +   YA +KT+AEK      +  GID
Sbjct: 124 SSGSAVSFNGKDKDV--LDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQNGID 181
Query: 181 MVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEET 240
           +V +   F+VG  + P+   ++   L +V G + +   T    VH+DDV  AHI  +E +
Sbjct: 182 VVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHIYLLENS 241
Query: 241 RASGRLICSSSVAHWSPIIEMLKATYPSYPYES--KCSKQEGDNSPHSMDTSKLFELGF 297
              GR  CS  +     + ++L A YP Y   +  +  + +G   P  ++T KL + GF
Sbjct: 242 VPGGRYNCSPFIVPIEEMSQLLSAKYPEYQILTVDELKEIKGARLP-DLNTKKLVDAGF 299

>pdb|1Y1P|A Chain A, X-Ray Structure Of Aldehyde Reductase With Nadph Length = 342

Iteration: 1
 Score =  105 bits (262), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 150/329 (45%), Gaps = 40/329 (12%)
Query: 5   CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
            VTG  GF+A+H+V+ LL+ G+ VR T R    L+ +   W+          +  D+L +
Sbjct: 15  LVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQ 74
Query: 65  GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
           G++DE I+G  GV H AS  +V + N     ++ P I GTLN L +     SVKR VLTS
Sbjct: 75  GAYDEVIKGAAGVAHIAS--VVSFSNKYD-EVVTPAIGGTLNALRAAAATPSVKRFVLTS 131
Query: 125 SCSSIRYRHDAQQVSPLNESHW---------SDPDYCKHYNLW-YAYAKTIAEKEAWRIA 174
           S  S        +   L+E  W         + P+     +LW YA +KT AE  AW+  
Sbjct: 132 STVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFM 191
Query: 175 KDCG--IDMVVVNPSFVVGPLLAP--QPTSTLLLILAMVKG--------LRGEYPNTTV- 221
            +      +  V P++ +G +  P  Q  ST   ++++  G        +  +Y  + V 
Sbjct: 192 DENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSAVD 251
Query: 222 -GFVHIDDVVGAHILAMEETRASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEG 280
            G +H+    G  +L   E R   R+  ++    W+ ++   +  YPS  + +    Q  
Sbjct: 252 IGLLHL----GCLVLPQIERR---RVYGTAGTFDWNTVLATFRKLYPSKTFPADFPDQGQ 304
Query: 281 DNSPHSMDTSKLFE----LGFVGFKSVPQ 305
           D S    DT+   E    LG  G++S+ +
Sbjct: 305 DLS--KFDTAPSLEILKSLGRPGWRSIEE 331

>pdb|1UJM|A Chain A, Crystal Structure Of Aldehyde Reductase 2 From Sporobolomyces Salmonicolor Aku4429 Length = 342

Iteration: 1
 Score =  101 bits (252), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 92/326 (28%), Positives = 143/326 (43%), Gaps = 34/326 (10%)
Query: 5   CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
            VTG  GF+A+H+V+ LL+ G+ VR T R    L+ +   W+          +  D L +
Sbjct: 15  LVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDXLKQ 74
Query: 65  GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
           G++DE I+G  GV H AS  +V + N     ++ P I GTLN L +     SVKR VLTS
Sbjct: 75  GAYDEVIKGAAGVAHIAS--VVSFSNKYD-EVVTPAIGGTLNALRAAAATPSVKRFVLTS 131
Query: 125 SCSSIRYRHDAQQVSPLNESHW---------SDPDYCKHYNLW-YAYAKTIAEKEAWRIA 174
           S  S        +   L+E  W         + P+     +LW YA +KT AE  AW+  
Sbjct: 132 STVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFX 191
Query: 175 KDCG--IDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEY--------PNTTVGFV 224
            +      +  V P++ +G +  P+ T +            GE         P   V  V
Sbjct: 192 DENKPHFTLNAVLPNYTIGTIFDPE-TQSGSTSGWXXSLFNGEVSPALALXPPQYYVSAV 250
Query: 225 HIDDV-VGAHILAMEETRASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNS 283
            I  + +G  +L   E R   R+  ++    W+ ++   +  YPS  + +    Q  D S
Sbjct: 251 DIGLLHLGCLVLPQIERR---RVYGTAGTFDWNTVLATFRKLYPSKTFPADFPDQGQDLS 307
Query: 284 PHSMDTSKLFE----LGFVGFKSVPQ 305
               DT+   E    LG  G++S+ +
Sbjct: 308 --KFDTAPSLEILKSLGRPGWRSIEE 331

>pdb|2B69|A Chain A, Crystal Structure Of Human Udp-Glucoronic Acid Decarboxylase Length = 343

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 76/194 (39%), Gaps = 27/194 (13%)
Query: 5   CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
            +TGG GF+ +HL   L   GH V  TV D        F       E  +     +L+  
Sbjct: 31  LITGGAGFVGSHLTDKLXXDGHEV--TVVDN------FFTGRKRNVEHWIGHENFELINH 82
Query: 65  GSFDEAIQGVDGVFHTASPVLVP-YDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLT 123
              +     VD ++H ASP   P Y  N   TL    I GTLN L     AK V   +L 
Sbjct: 83  DVVEPLYIEVDQIYHLASPASPPNYXYNPIKTLKTNTI-GTLNXLGL---AKRVGARLLL 138
Query: 124 SSCSSIRYRHDAQQVSPLNESHWS-----DPDYCKHYNLWYAYAKTIAEKEAWRIAKDCG 178
           +S S +   +   +V P +E +W       P  C      Y   K +AE   +   K  G
Sbjct: 139 ASTSEV---YGDPEVHPQSEDYWGHVNPIGPRAC------YDEGKRVAETXCYAYXKQEG 189
Query: 179 IDMVVVNPSFVVGP 192
           +++ V       GP
Sbjct: 190 VEVRVARIFNTFGP 203

>pdb|1R6D|A Chain A, Crystal Structure Of Desiv Double Mutant (Dtdp-Glucose 4,6- Dehydratase) From Streptomyces Venezuelae With Nad And Dau Bound Length = 337

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 71/309 (22%), Positives = 123/309 (39%), Gaps = 36/309 (11%)
Query: 6   VTGGTGFIAAHLVKALLDKGH--MVRTTVRDPEDLSKVGFLWELN--GAEERLKIMKADL 61
           VTGG GFI +H V+ LL   +  +    V   + L+  G    L    A+ RL+ +  D+
Sbjct: 5   VTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDI 64
Query: 62  LMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVV 121
              G     ++GVD + H A+   V       +   +  ++GT  +L  C     V RVV
Sbjct: 65  RDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLL-QCAVDAGVGRVV 123
Query: 122 LTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDM 181
             S+          Q    ++   W++    +  N  YA +K  ++  A    +  G+D+
Sbjct: 124 HVSTN---------QVYGSIDSGSWTESSPLEP-NSPYAASKAGSDLVARAYHRTYGLDV 173
Query: 182 VVVNPSFVVGPLLAPQPTSTLLLILAMVKG---LRGEYPNTTVGFVHIDDVVGAHILAME 238
            +       GP   P+    L +   +  G   L G+  N    +VH DD    H   + 
Sbjct: 174 RITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVRE-WVHTDD----HCRGIA 228
Query: 239 ETRASGRLICSSSVAHWSPIIE---------MLKATYPSYPYESKCSKQEGDNSPHSMDT 289
              A GR   +  + H    +E         +L +    +    K + ++G +  +S+D 
Sbjct: 229 LVLAGGR---AGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHDLRYSLDG 285
Query: 290 SKL-FELGF 297
            K+  ELG+
Sbjct: 286 GKIERELGY 294

>pdb|1R66|A Chain A, Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydratase) From Streptomyces Venezuelae With Nad And Tyd Bound Length = 337

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/309 (22%), Positives = 123/309 (39%), Gaps = 36/309 (11%)
Query: 6   VTGGTGFIAAHLVKALLDKGH--MVRTTVRDPEDLSKVGFLWELN--GAEERLKIMKADL 61
           VTGG GFI +H V+ LL   +  +    V   + L+  G    L    A+ RL+ +  D+
Sbjct: 5   VTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDI 64
Query: 62  LMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVV 121
              G     ++GVD + H A+   V       +   +  ++GT  +L  C     V RVV
Sbjct: 65  RDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLL-QCAVDAGVGRVV 123
Query: 122 LTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDM 181
             S+          +    ++   W++    +  N  YA +K  ++  A    +  G+D+
Sbjct: 124 HVST---------DEVYGSIDSGSWTESSPLEP-NSPYAASKAGSDLVARAYHRTYGLDV 173
Query: 182 VVVNPSFVVGPLLAPQPTSTLLLILAMVKG---LRGEYPNTTVGFVHIDDVVGAHILAME 238
            +       GP   P+    L +   +  G   L G+  N    +VH DD    H   + 
Sbjct: 174 RITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVRE-WVHTDD----HCRGIA 228
Query: 239 ETRASGRLICSSSVAHWSPIIE---------MLKATYPSYPYESKCSKQEGDNSPHSMDT 289
              A GR   +  + H    +E         +L +    +    K + ++G +  +S+D 
Sbjct: 229 LVLAGGR---AGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHDLRYSLDG 285
Query: 290 SKL-FELGF 297
            K+  ELG+
Sbjct: 286 GKIERELGY 294

>pdb|2GN4|A Chain A, Crystal Structure Of Udp-Glcnac Inverting 4,6-Dehydratase In Complex With Nadph And Udp-Glcnac Length = 344

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 3/120 (2%)
Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           +TGGTG      V+ +LD  +  +  V   ++L +     E N  + R++    D+    
Sbjct: 26  ITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN--DPRMRFFIGDVRDLE 83
Query: 66  SFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSS 125
             + A++GVD   H A+   VP         I   I G  NV+++C K  ++ +V+  S+
Sbjct: 84  RLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLK-NAISQVIALST 142

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	305
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	1e-141
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	1e-141
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	1e-140
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	1e-119
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	4e-72
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	9e-65
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	6e-29
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	4e-27
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	8e-27
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	1e-26
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	3e-26
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	1e-25
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	1e-25
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	5e-25
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	9e-25
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	2e-24
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	3e-24
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	3e-24
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	7e-24
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	2e-23
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	2e-23
1xq6_A	253	Unknown protein; structural genomics, protein stru	2e-22
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	5e-22
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	5e-22
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	1e-20
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	1e-20
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	3e-20
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	8e-20
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	2e-18
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	5e-18
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	7e-18
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	7e-17
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	9e-17
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	5e-16
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	6e-16
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	8e-16
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	1e-15
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	6e-14
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	1e-13
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	4e-13
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	5e-13
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	8e-13
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	3e-12
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	3e-12
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	9e-12
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	9e-12
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	9e-12
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	1e-11
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	1e-11
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	2e-11
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	4e-10
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	2e-09
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	6e-09
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	8e-09
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	9e-09
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	9e-09
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	1e-08
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	1e-08
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	3e-08
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	6e-08
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	3e-07
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	4e-07
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	1e-06
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	6e-06
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	4e-05
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	1e-04
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	1e-04
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	1e-04
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	4e-04
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	6e-04

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score =  400 bits (1029), Expect = e-141
 Identities = 114/297 (38%), Positives = 168/297 (56%), Gaps = 7/297 (2%)

Query: 5   CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
           CVTG +GFI + LV  LL++G+ VR TVRDP ++ KV  L +L  AE  L + KADL  E
Sbjct: 9   CVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADE 68

Query: 65  GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
           GSFDEAI+G  GVFH A+P+     +  +  +I P I+G L ++ SC  AK+V+R+V TS
Sbjct: 69  GSFDEAIKGCTGVFHVATPMDFESKDP-ENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTS 127

Query: 125 SCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNL---WYAYAKTIAEKEAWRIAKDCGIDM 181
           S  ++  +     V   +ES WSD ++C+   +    Y  +KT+AE+ AW+ AK+  ID 
Sbjct: 128 SAGTVNIQEHQLPV--YDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDF 185

Query: 182 VVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG-FVHIDDVVGAHILAMEET 240
           + + P+ VVGP +      +L+  L+ + G    Y     G FVH+DD+  AHI   E  
Sbjct: 186 ITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHIYLFENP 245

Query: 241 RASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELGF 297
           +A GR ICSS       + +ML+  YP Y   ++    + +       + KL +LGF
Sbjct: 246 KAEGRYICSSHDCIILDLAKMLREKYPEYNIPTEFKGVDENLKSVCFSSKKLTDLGF 302

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score =  399 bits (1027), Expect = e-141
 Identities = 105/298 (35%), Positives = 157/298 (52%), Gaps = 8/298 (2%)

Query: 5   CVTGGTGFIAAHLVKALLDKGHMVRTTVR-DPEDLSKVGFLWELNGAEERLKIMKADLLM 63
           CVTGGTGF+ + ++K+LL+ G+ V TT+R DPE    V FL  L GA E+L    ADL  
Sbjct: 5   CVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSN 64

Query: 64  EGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLT 123
             SF  AI+G  G+FHTASP+        +  +    + G L +L +C  +K+VKR + T
Sbjct: 65  PDSFAAAIEGCVGIFHTASPIDFAVSEP-EEIVTKRTVDGALGILKACVNSKTVKRFIYT 123

Query: 124 SSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLW---YAYAKTIAEKEAWRIAKDCGID 180
           SS S++ +    + V  L+ES WSD D  +    +   YA +KT+AEK      +  GID
Sbjct: 124 SSGSAVSFNGKDKDV--LDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQNGID 181

Query: 181 MVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEET 240
           +V +   F+VG  + P+   ++   L +V G + +   T    VH+DDV  AHI  +E +
Sbjct: 182 VVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHIYLLENS 241

Query: 241 RASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCS-KQEGDNSPHSMDTSKLFELGF 297
              GR  CS  +     + ++L A YP Y   +    K+        ++T KL + GF
Sbjct: 242 VPGGRYNCSPFIVPIEEMSQLLSAKYPEYQILTVDELKEIKGARLPDLNTKKLVDAGF 299

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score =  397 bits (1022), Expect = e-140
 Identities = 107/304 (35%), Positives = 165/304 (54%), Gaps = 14/304 (4%)

Query: 5   CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
           CV GGTGF+A+ LVK LL KG+ V TTVRDP++  KV  L EL    + LKI +ADL  E
Sbjct: 13  CVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGD-LKIFRADLTDE 71

Query: 65  GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
            SF+  I G D VFH A+PV    ++  +  +I P I+G +NV+ +C +AKSVKRV+LTS
Sbjct: 72  LSFEAPIAGCDFVFHVATPVHFASEDP-ENDMIKPAIQGVVNVMKACTRAKSVKRVILTS 130

Query: 125 SCSSIRYRHDAQQVSPLNESHWSDPDYC---KHYNLWYAYAKTIAEKEAWRIAKDCGIDM 181
           S +++           ++E +W+D ++    K     Y  +KT+AEK AW+ A++  ID+
Sbjct: 131 SAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEENNIDL 190

Query: 182 VVVNPSFVVGPLLAPQPTSTLLLILAMVKG--------LRGEYPNTTVGFVHIDDVVGAH 233
           + V P+ + G  L     S++ L ++++ G           +  + +V   H++DV  AH
Sbjct: 191 ITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHVEDVCRAH 250

Query: 234 ILAMEETRASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLF 293
           I   E+  ASGR IC ++      + + L   YP Y   +        +    + + KL 
Sbjct: 251 IFVAEKESASGRYICCAANTSVPELAKFLSKRYPQYKVPTDFGDFPPKS-KLIISSEKLV 309

Query: 294 ELGF 297
           + GF
Sbjct: 310 KEGF 313

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score =  343 bits (883), Expect = e-119
 Identities = 83/318 (26%), Positives = 136/318 (42%), Gaps = 22/318 (6%)

Query: 5   CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
            VTG  GF+A+H+V+ LL+ G+ VR T R    L+ +   W+          +  D+L +
Sbjct: 15  LVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQ 74

Query: 65  GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
           G++DE I+G  GV H AS V     +N    ++ P I GTLN L +     SVKR VLTS
Sbjct: 75  GAYDEVIKGAAGVAHIASVVSF---SNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTS 131

Query: 125 SCSSIRYRHDAQQVSPLNESHWSDPDYC----------KHYNLWYAYAKTIAEKEAWRIA 174
           S  S        +   L+E  W+               +     YA +KT AE  AW+  
Sbjct: 132 STVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFM 191

Query: 175 KD--CGIDMVVVNPSFVVGPLLAP--QPTSTLLLILAMVKGLRGEYPNTTVG--FVHIDD 228
            +      +  V P++ +G +  P  Q  ST   ++++  G             +V   D
Sbjct: 192 DENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSAVD 251

Query: 229 VVGAHILAMEETRASG-RLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNS--PH 285
           +   H+  +   +    R+  ++    W+ ++   +  YPS  + +    Q  D S    
Sbjct: 252 IGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPDQGQDLSKFDT 311

Query: 286 SMDTSKLFELGFVGFKSV 303
           +     L  LG  G++S+
Sbjct: 312 APSLEILKSLGRPGWRSI 329

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score =  224 bits (574), Expect = 4e-72
 Identities = 46/261 (17%), Positives = 97/261 (37%), Gaps = 19/261 (7%)

Query: 4   YCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLM 63
           Y V G TG +  H  +A+   GH +    R    + ++ +L          +   A++L 
Sbjct: 16  YAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYL--------EPECRVAEMLD 67

Query: 64  EGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLT 123
               + A++G+DGV  +A     P         +   +  T    ++C +A+ V R++  
Sbjct: 68  HAGLERALRGLDGVIFSAGY--YPSRPRRWQEEVASALGQTNPFYAACLQAR-VPRILYV 124

Query: 124 SSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVV 183
            S  ++          P +E  + D          Y   K   +++A   A++ G+ +V+
Sbjct: 125 GSAYAMPRHPQGL---PGHEGLFYDS--LPSGKSSYVLCKWALDEQAREQARN-GLPVVI 178

Query: 184 VNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRAS 243
             P  V+G  L   PT+  ++       +   Y       +   +     ++A+E  R  
Sbjct: 179 GIPGMVLGE-LDIGPTTGRVITAIGNGEMTH-YVAGQRNVIDAAEAGRGLLMALERGRIG 236

Query: 244 GRLICSSSVAHWSPIIEMLKA 264
            R + +      + +   +  
Sbjct: 237 ERYLLTGHNLEMADLTRRIAE 257

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score =  202 bits (516), Expect = 9e-65
 Identities = 50/254 (19%), Positives = 86/254 (33%), Gaps = 35/254 (13%)

Query: 5   CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
            + G +GF+ + L+   L++G  V   VR PE +             E LK+ KAD+   
Sbjct: 8   VLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIK---------IENEHLKVKKADVSSL 58

Query: 65  GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
               E  +G D V    +P     D      + D  IK  L ++   KKA  V R ++  
Sbjct: 59  DEVCEVCKGADAVISAFNPGWNNPD------IYDETIKVYLTIIDGVKKAG-VNRFLMVG 111

Query: 125 SCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVV 184
              S+      + +           D  +         K + E     + K+  ID V  
Sbjct: 112 GAGSLFIAPGLRLM-----------DSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFF 160

Query: 185 NPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRASG 244
           +P+  + P    +     L    M+  + G         + ++D   A I  +E  +   
Sbjct: 161 SPAADMRP--GVRTGRYRLGKDDMIVDIVGN------SHISVEDYAAAMIDELEHPKHHQ 212

Query: 245 RLICSSSVAHWSPI 258
                  + H    
Sbjct: 213 ERFTIGYLEHHHHH 226

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score =  111 bits (281), Expect = 6e-29
 Identities = 69/321 (21%), Positives = 118/321 (36%), Gaps = 63/321 (19%)

Query: 1   MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKAD 60
           M    VTGG GFI +H+V  L +  + +   V D  +LS  G    +N   E  +++KAD
Sbjct: 1   MSLIVVTGGAGFIGSHVVDKLSE-SNEI--VVID--NLSS-GNEEFVN---EAARLVKAD 51

Query: 61  LLMEGSFDEAIQGVDGVFHTASPVLVP---------YDNNIQATLIDPCIKGTLNVLSSC 111
           L       + ++G + V+H A+   V          Y NN         +  T  +L + 
Sbjct: 52  LA-ADDIKDYLKGAEEVWHIAANPDVRIGAENPDEIYRNN---------VLATYRLLEAM 101

Query: 112 KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAW 171
           +KA  V R+V TS+ +   Y  +A+ + P  E + + P         Y  +K   E    
Sbjct: 102 RKAG-VSRIVFTSTSTV--Y-GEAKVI-PTPEDYPTHPISL------YGASKLACEALIE 150

Query: 172 RIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG-------FV 224
                  +   +   + V+G     + T  ++    M      E     +G       ++
Sbjct: 151 SYCHTFDMQAWIYRFANVIG----RRSTHGVIYDFIMKLKRNPEEL-EILGNGEQNKSYI 205

Query: 225 HIDDVVGAHILAMEETRASGRLICSS----SVAHWSPIIEMLKA---TYPSYPYESKCSK 277
           +I D V A +  +            S     V     I E++       P + +      
Sbjct: 206 YISDCVDAMLFGLRGDERVNIFNIGSEDQIKVKR---IAEIVCEELGLSPRFRFTGGDRG 262

Query: 278 QEGDNSPHSM-DTSKLFELGF 297
            +GD  P  +    KL  LG+
Sbjct: 263 WKGD-VPVMLLSIEKLKRLGW 282

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score =  107 bits (268), Expect = 4e-27
 Identities = 55/307 (17%), Positives = 110/307 (35%), Gaps = 37/307 (12%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           VTG +G I   LV  L +K         D            +      +K +  D+    
Sbjct: 4   VTGSSGQIGTELVPYLAEKYGKKNVIASDI-----------VQRDTGGIKFITLDVSNRD 52

Query: 66  SFDEAIQ--GVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLT 123
             D A++   +D +FH A  +    + +         + GT N+L + K+ + V++VV+ 
Sbjct: 53  EIDRAVEKYSIDAIFHLAGILSAKGEKDPALA-YKVNMNGTYNILEAAKQHR-VEKVVIP 110

Query: 124 SSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVV 183
           S+     +  +  +   +     + P         +   K  AE       +  G+D+  
Sbjct: 111 STIGV--FGPETPKN-KVPSITITRPRT------MFGVTKIAAELLGQYYYEKFGLDVRS 161

Query: 184 VNPSFVVGPLLAPQPTSTLLLILAMVKGLRGE------YPNTTVGFVHIDDVVGAHILAM 237
           +    ++     P   +T   +      ++ E       PN  +  +++ D + A +   
Sbjct: 162 LRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLY 221

Query: 238 EETRASGRLICSSSVA--HWSP--IIEMLKATYPSY--PYESKCSKQEGDNSPHSMDTSK 291
           E  R    L    +V    ++P  +   +K   P +   Y+     +     P S+D+S+
Sbjct: 222 EADRDKLVLRNGYNVTAYTFTPSELYSKIKERIPEFEIEYKEDFRDKIAATWPESLDSSE 281

Query: 292 LF-ELGF 297
              E GF
Sbjct: 282 ASNEWGF 288

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score =  105 bits (265), Expect = 8e-27
 Identities = 62/255 (24%), Positives = 93/255 (36%), Gaps = 51/255 (20%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           VTGG GFI +HLV  L++ G+ V   V D  +LS  G    +N      ++   DL    
Sbjct: 5   VTGGAGFIGSHLVDKLVELGYEV--VVVD--NLSS-GRREFVN---PSAELHVRDLKDYS 56

Query: 66  SFDEAIQGVDGVFHTASPVLVP---------YDNNIQATLIDPCIKGTLNVLSSCKKAKS 116
                    D VFH A+   V          ++ N         +  T NVL   ++   
Sbjct: 57  WGAGI--KGDVVFHFAANPEVRLSTTEPIVHFNEN---------VVATFNVLEWARQTG- 104

Query: 117 VKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD 176
           V+ VV  SS +   Y  DA  + P  E     P         Y  AK   E      A+ 
Sbjct: 105 VRTVVFASSSTV--Y-GDADVI-PTPEEEPYKPISV------YGAAKAAGEVMCATYARL 154

Query: 177 CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG-------FVHIDDV 229
            G+  + V  + VVGP L             ++K  R       +G       ++++ D 
Sbjct: 155 FGVRCLAVRYANVVGPRLRHGVIYDF-----IMKLRRNPNVLEVLGDGTQRKSYLYVRDA 209

Query: 230 VGAHILAMEETRASG 244
           V A + A ++     
Sbjct: 210 VEATLAAWKKFEEMD 224

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score =  105 bits (264), Expect = 1e-26
 Identities = 54/316 (17%), Positives = 101/316 (31%), Gaps = 70/316 (22%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           VTGGTGF+  ++V+++ + G+     +               N A    +   +D  +E 
Sbjct: 7   VTGGTGFLGQYVVESIKNDGNTPI--ILT--RSIG-------NKAINDYEYRVSDYTLE- 54

Query: 66  SFDEAIQGVDGVFHTASPVLVPY-----DNNIQATLIDPCIKGTLNVLSSCKKAKSVKRV 120
                +  VD V H A+            +N            T N+  +C +   +  +
Sbjct: 55  DLINQLNDVDAVVHLAATRGSQGKISEFHDNEI---------LTQNLYDACYENN-ISNI 104

Query: 121 VLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGID 180
           V  S+  S  Y    +   P NE     PD        Y  +K   E      ++  G+ 
Sbjct: 105 VYAST-ISA-Y--SDETSLPWNEKELPLPDLM------YGVSKLACEHIGNIYSRKKGLC 154

Query: 181 MVVVNPSFVVGPLLAPQPTSTLLLILAMV------KGLRGEYPNTTVG-------FVHID 227
           +  +  + + G                 +      +   GE   T          F++  
Sbjct: 155 IKNLRFAHLYGFNEKN----------NYMINRFFRQAFHGE-QLTLHANSVAKREFLYAK 203

Query: 228 DVVGAHILAMEETRASGRL-ICSS---SVAHWSPIIEMLKATYPSYPYESKCSKQEGDNS 283
           D   + I A+++ + SG   I S    +      +   +   + +       +    +  
Sbjct: 204 DAAKSVIYALKQEKVSGTFNIGSGDALTNYE---VANTINNAFGNKDNLLVKNPNANEGI 260

Query: 284 PHSM-DTSKLFE-LGF 297
             S  D+SK  E L F
Sbjct: 261 HSSYMDSSKAKELLDF 276

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score =  105 bits (263), Expect = 3e-26
 Identities = 71/327 (21%), Positives = 117/327 (35%), Gaps = 54/327 (16%)

Query: 4   YCVTGGTGFIAAHLVKALLDKGHMVR-----TTVRDPEDLSKVGFLWELNGAEERLKIMK 58
           + +TG  GFI ++L++ LL     V       T     +L +V  L          K ++
Sbjct: 30  WLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQ-RNLDEVRSLVSEKQW-SNFKFIQ 87

Query: 59  ADLLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDP------CIKGTLNVLSSCK 112
            D+      + A  GVD V H A+   VP       ++ DP       I G LN+L + +
Sbjct: 88  GDIRNLDDCNNACAGVDYVLHQAALGSVPR------SINDPITSNATNIDGFLNMLIAAR 141

Query: 113 KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWR 172
            AK V+     +S SS  Y        P  E     P         YA  K + E  A  
Sbjct: 142 DAK-VQSFTYAAS-SST-Y--GDHPGLPKVEDTIGKPLSP------YAVTKYVNELYADV 190

Query: 173 IAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYP------NTTVGFVHI 226
            ++  G   + +    V G    P      ++       ++G+         T+  F +I
Sbjct: 191 FSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYI 250

Query: 227 DDVVGAHILAMEETR-ASGRLICSSSVAHWSPI-----IEMLKATYPSYPYESKCSK--- 277
           ++ V A++LA      A  ++    ++A             L+                 
Sbjct: 251 ENTVQANLLAATAGLDARNQVY---NIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYR 307

Query: 278 --QEGDNSPHSM-DTSKLFELGFVGFK 301
             +EGD   HS+ D SK  +L  +G+ 
Sbjct: 308 DFREGD-VRHSLADISKAAKL--LGYA 331

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score =  103 bits (260), Expect = 1e-25
 Identities = 49/254 (19%), Positives = 86/254 (33%), Gaps = 34/254 (13%)

Query: 6   VTGGTGFIAAHLVKALLDKG-HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
           V GG GF+ ++LVK LL+ G + V   V D  +L        +      ++  +  +  +
Sbjct: 37  VVGGAGFVGSNLVKRLLELGVNQVH--VVD--NLL-SAEKINVPDHP-AVRFSETSITDD 90

Query: 65  GSFDEAIQGVDGVFHTASPVLVP-YDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLT 123
                     D VFH A+        ++  A   +     TL +    K  K +K+VV +
Sbjct: 91  ALLASLQDEYDYVFHLATYHGNQSSIHDPLAD-HENNTLTTLKLYERLKHFKRLKKVVYS 149

Query: 124 SSCSSI--RYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDM 181
           ++  SI  +   DA+     +     + D        Y+ +K   E  +    K   +  
Sbjct: 150 AAGCSIAEKTFDDAKATEETDIVSLHNNDSP------YSMSKIFGEFYSVYYHKQHQLPT 203

Query: 182 VVVNPSFVVGPLLAPQPTSTL---------LLILAMVKGLRGEYPNTTVG-------FVH 225
           V      V GP                   +    + K L+G  P            F+ 
Sbjct: 204 VRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGM-PLPLENGGVATRDFIF 262

Query: 226 IDDVVGAHILAMEE 239
           ++DV    I    +
Sbjct: 263 VEDVANGLIACAAD 276

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score =  102 bits (257), Expect = 1e-25
 Identities = 58/260 (22%), Positives = 102/260 (39%), Gaps = 51/260 (19%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           VTGG GFI +H+V+ LL +G  V   V D  +L+  G    +    + +   + DL  + 
Sbjct: 5   VTGGAGFIGSHIVEDLLARGLEVA--VLD--NLAT-GKRENVP---KGVPFFRVDLRDKE 56

Query: 66  SFDEAIQG--VDGVFHTASPVLVP---------YDNNIQATLIDPCIKGTLNVLSSCKKA 114
             + A +      V H A+   V          ++ N+          G LN+L +C++ 
Sbjct: 57  GVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLL---------GGLNLLEACRQY 107

Query: 115 KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIA 174
             V+++V  S+  +I Y  +  +     E+    P      +  YA +K   E       
Sbjct: 108 G-VEKLVFASTGGAI-Y-GEVPEGERAEETWPPRPK-----SP-YAASKAAFEHYLSVYG 158

Query: 175 KDCGIDMVVVNPSFVVGPLLAPQPTSTL--LLILAMVKGLR-----GEYPNTTVG----- 222
           +  G+  V +    V GP   P   + +  +    ++KGL       + P          
Sbjct: 159 QSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTP--GDEGCVRD 216

Query: 223 FVHIDDVVGAHILAMEETRA 242
           +V++ DV  AH LA+     
Sbjct: 217 YVYVGDVAEAHALALFSLEG 236

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score =  101 bits (255), Expect = 5e-25
 Identities = 70/322 (21%), Positives = 121/322 (37%), Gaps = 44/322 (13%)

Query: 4   YCVTGGTGFIAAHLVKALLDKGHMVR-----TTVRDPEDLSKVGFLWELNGAEERLKIMK 58
           + +TG  GFI ++L++ LL    +V      +T     +L +V  L        R   ++
Sbjct: 28  WLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQY-NLDEVKTLVSTE-QWSRFCFIE 85

Query: 59  ADLLMEGSFDEAIQGVDGVFHTASPVLVPYD-NNIQATLIDPCIKGTLNVLSSCKKAKSV 117
            D+    + ++ ++GVD V H A+   VP    +   T     I G LN+L + K A+ V
Sbjct: 86  GDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITT-NATNITGFLNILHAAKNAQ-V 143

Query: 118 KRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC 177
           +     +S SS  Y        P  E +  +P         YA  K + E  A   A+  
Sbjct: 144 QSFTYAAS-SST-Y--GDHPALPKVEENIGNPLSP------YAVTKYVNEIYAQVYARTY 193

Query: 178 GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYP------NTTVGFVHIDDVVG 231
           G   + +    V G    P      ++       L+G+         T+  F +ID+V+ 
Sbjct: 194 GFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQ 253

Query: 232 AHILAMEET-RASGRLICSSSVAHWSPI-----IEMLKATYPSYPYESKCSK-----QEG 280
            +IL+      A   +    +VA             +        +  K S      + G
Sbjct: 254 MNILSALAKDSAKDNIY---NVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKYREFRSG 310

Query: 281 DNSPHSM-DTSKLFELGFVGFK 301
           D   HS  D +K  +L  + ++
Sbjct: 311 D-VRHSQADVTKAIDL--LKYR 329

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310

 Score =  100 bits (251), Expect = 9e-25
 Identities = 66/324 (20%), Positives = 111/324 (34%), Gaps = 71/324 (21%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWE-LNGAEERLKIMKADLLME 64
           VTGG GFI +++VKAL DKG      V D  +L   G  +  L        + K D L++
Sbjct: 4   VTGGAGFIGSNIVKALNDKGIT-DILVVD--NLKD-GTKFVNLVDLNIADYMDKEDFLIQ 59

Query: 65  GSFDEAIQGVDGVFHTASPVLVP-------YDNNIQATLIDPCIKGTLNVLSSCKKAKSV 117
               E    V+ +FH  +             DNN Q          +  +L  C + +  
Sbjct: 60  IMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQ---------YSKELLHYCLERE-- 108

Query: 118 KRVVLTSSCS-----SIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWR 172
              +  SS +     +  +    +   PLN                Y Y+K + ++   +
Sbjct: 109 IPFLYASSAATYGGRTSDFIESREYEKPLN------V---------YGYSKFLFDEYVRQ 153

Query: 173 IAKDCGIDMVVV---NPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG------- 222
           I  +    +V     N   V GP    + +   +      +   GE P    G       
Sbjct: 154 ILPEANSQIVGFRYFN---VYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRD 210

Query: 223 FVHIDDVVGAHILAMEETRASGRLICSSSVAH-WSPIIEMLKAT-------YPSYPYESK 274
           FV++ DV   ++  + E   SG     +  A  +  + +   A        Y  +P + K
Sbjct: 211 FVYVGDVADVNLWFL-ENGVSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLK 269

Query: 275 CSKQEGDNSPHSM-DTSKLFELGF 297
                G     +  D + L   G+
Sbjct: 270 -----GRYQAFTQADLTNLRAAGY 288

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score =  100 bits (250), Expect = 2e-24
 Identities = 64/321 (19%), Positives = 110/321 (34%), Gaps = 65/321 (20%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWE-LNGAEERLKIMKADLLME 64
           VTGG GFI +++VKAL DKG      V D  +L   G  +  L        + K D L++
Sbjct: 51  VTGGAGFIGSNIVKALNDKGIT-DILVVD--NLKD-GTKFVNLVDLNIADYMDKEDFLIQ 106

Query: 65  GSFDEAIQGVDGVFHTASPVLVP-------YDNNIQATLIDPCIKGTLNVLSSCKKAKSV 117
               E    V+ +FH  +             DNN Q          +  +L  C + +  
Sbjct: 107 IMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQ---------YSKELLHYCLERE-- 155

Query: 118 KRVVLTSSCS-----SIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWR 172
              +  SS +     +  +    +   PLN                + Y+K + ++   +
Sbjct: 156 IPFLYASSAATYGGRTSDFIESREYEKPLN------V---------FGYSKFLFDEYVRQ 200

Query: 173 IAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG-------FVH 225
           I  +    +V      V GP    + +   +      +   GE P    G       FV+
Sbjct: 201 ILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVY 260

Query: 226 IDDVVGAHILAMEETRASGRLICSSSVAH-WSPIIEMLKAT-------YPSYPYESKCSK 277
           + DV   ++  + E   SG     +  A  +  + +   A        Y  +P + K   
Sbjct: 261 VGDVADVNLWFL-ENGVSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRY 319

Query: 278 QEGDNSPHSM-DTSKLFELGF 297
           Q       +  D + L   G+
Sbjct: 320 Q-----AFTQADLTNLRAAGY 335

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score =  100 bits (250), Expect = 3e-24
 Identities = 47/248 (18%), Positives = 85/248 (34%), Gaps = 32/248 (12%)

Query: 5   CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
            +TG  GFIA+H+ + L  +GH V  +     D  K   + E    +E   +   DL + 
Sbjct: 33  SITGAGGFIASHIARRLKHEGHYVIAS-----DWKKNEHMTEDMFCDEFHLV---DLRVM 84

Query: 65  GSFDEAIQGVDGVFHTASPVLVP-YDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLT 123
            +  +  +GVD VF+ A+ +    +  +  + ++      + N++ + +    +KR    
Sbjct: 85  ENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRFFYA 143

Query: 124 S-SCSSIRYRHDAQQVSPLNESHWSD-----PDYCKHYNLWYAYAKTIAEKEAWRIAKDC 177
           S +C    Y    Q  +       SD     P         +   K   E+      KD 
Sbjct: 144 SSACI---YPEFKQLETTNVSLKESDAWPAEPQDA------FGLEKLATEELCKHYNKDF 194

Query: 178 GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG-------FVHIDDVV 230
           GI+  +     + GP    +            K           G       F  ID+ V
Sbjct: 195 GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECV 254

Query: 231 GAHILAME 238
              +   +
Sbjct: 255 EGVLRLTK 262

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 99.2 bits (248), Expect = 3e-24
 Identities = 64/317 (20%), Positives = 110/317 (34%), Gaps = 59/317 (18%)

Query: 1   MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKAD 60
           M +  +TG  G I +H+ + LL++G  V     D  + +  G    L      L  ++  
Sbjct: 21  MKKVFITGICGQIGSHIAELLLERGDKVV--GID--NFAT-GRREHLKDH-PNLTFVEGS 74

Query: 61  LLMEGSFDEAIQGV--DGVFHTASPVLVPYDNNIQATLIDPC---IKGTLNVLSSCKKAK 115
           +      ++ I  +  D V HTA+    P D        +       G  NV+ + KK  
Sbjct: 75  IADHALVNQLIGDLQPDAVVHTAASYKDPDD------WYNDTLTNCVGGSNVVQAAKKNN 128

Query: 116 SVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAK 175
            V R V   +              P+   H  +P      N  YA +K+  E       +
Sbjct: 129 -VGRFVYFQTALCY---GVKPIQQPVRLDHPRNP-----ANSSYAISKSANED----YLE 175

Query: 176 DCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG-----FVHIDDVV 230
             G+D V    + VVGP     P    +    + +G +       V      FV + D+ 
Sbjct: 176 YSGLDFVTFRLANVVGPRNVSGPLP--IFFQRLSEGKK-----CFVTKARRDFVFVKDLA 228

Query: 231 GAHILAMEETR------ASGRLICSSSVAHWSPIIEMLKAT--YPSYPYESKCSKQEGDN 282
            A + A++         +SG      ++     + + +      PSYP          D 
Sbjct: 229 RATVRAVDGVGHGAYHFSSGT---DVAIKE---LYDAVVEAMALPSYPEPEIRELGPDD- 281

Query: 283 SPHSM-DTSKLFE-LGF 297
           +P  + D S+  +  G 
Sbjct: 282 APSILLDPSRTIQDFGK 298

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score = 97.0 bits (242), Expect = 7e-24
 Identities = 40/236 (16%), Positives = 72/236 (30%), Gaps = 41/236 (17%)

Query: 1   MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKAD 60
           +    VTG  G + + +   L    H VR +     D+  +G        E   +I+  D
Sbjct: 2   LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLS-----DIVDLGAA------EAHEEIVACD 50

Query: 61  LLMEGSFDEAIQGVDGVFHTA-----SPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAK 115
           L    +  + ++  DG+ H        P       NI          G  N+  + +   
Sbjct: 51  LADAQAVHDLVKDCDGIIHLGGVSVERPWNDILQANII---------GAYNLYEAARNLG 101

Query: 116 SVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAK 175
              R+V  SS  +I       + + ++      PD        Y  +K   E  A     
Sbjct: 102 -KPRIVFASSNHTIG---YYPRTTRIDTEVPRRPDS------LYGLSKCFGEDLASLYYH 151

Query: 176 DCGIDMVVVNPSFVVGPLLAPQPTSTLL----LILAMVKGLRGEYPNTTVGFVHID 227
              I+ + +            +  +T L     +  M +         TV  V+  
Sbjct: 152 KFDIETLNIRIGSCFPKPKDARMMATWLSVDDFMRLMKRAFVAPKLGCTV--VYGA 205

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 96.3 bits (240), Expect = 2e-23
 Identities = 37/199 (18%), Positives = 64/199 (32%), Gaps = 27/199 (13%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           VTG  G +   + + L     ++R     P           L+ A    + ++ DL    
Sbjct: 8   VTGAAGQLGRVMRERLAPMAEILRLADLSP-----------LDPAGPNEECVQCDLADAN 56

Query: 66  SFDEAIQGVDGVFHTAS-PVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
           + +  + G DG+ H     V  P++      ++   I G  N+  + +      R+V  S
Sbjct: 57  AVNAMVAGCDGIVHLGGISVEKPFE-----QILQGNIIGLYNLYEAARAHG-QPRIVFAS 110

Query: 125 SCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVV 184
           S  +I       Q   L     + PD        Y  +K   E  A       G +  +V
Sbjct: 111 SNHTIG---YYPQTERLGPDVPARPDGL------YGVSKCFGENLARMYFDKFGQETALV 161

Query: 185 NPSFVVGPLLAPQPTSTLL 203
                       +  ST  
Sbjct: 162 RIGSCTPEPNNYRMLSTWF 180

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score = 97.2 bits (243), Expect = 2e-23
 Identities = 49/254 (19%), Positives = 89/254 (35%), Gaps = 54/254 (21%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           +TGG G + ++L++  L +GH +   V D  + +  G    L      L +++  +   G
Sbjct: 25  ITGGAGCLGSNLIEHWLPQGHEI--LVID--NFAT-GKREVLP-PVAGLSVIEGSVTDAG 78

Query: 66  SFDEAIQG--VDGVFHTA----SP--VLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSV 117
             + A        V H+A     P         N+Q         G++NV  +  KA  V
Sbjct: 79  LLERAFDSFKPTHVVHSAAAYKDPDDWAEDAATNVQ---------GSINVAKAASKAG-V 128

Query: 118 KRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC 177
           KR++   +     Y        P+     + P         Y  +KT  E          
Sbjct: 129 KRLLNFQTALC--Y--GRPATVPIPIDSPTAPF-----TS-YGISKTAGEA----FLMMS 174

Query: 178 GIDMVVVNPSFVVGP--LLAPQPTSTLLLILAMVKGLRGEYPNTTVG-----FVHIDDVV 230
            + +V +  + V GP   + P P         +  G +              F+ + D +
Sbjct: 175 DVPVVSLRLANVTGPRLAIGPIP----TFYKRLKAGQK-----CFCSDTVRDFLDMSDFL 225

Query: 231 GAHILAMEETRASG 244
               L+++E R +G
Sbjct: 226 AIADLSLQEGRPTG 239

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 93.0 bits (231), Expect = 2e-22
 Identities = 46/278 (16%), Positives = 81/278 (29%), Gaps = 56/278 (20%)

Query: 1   MPEYCVTGGTGFIAAHLVKALLDKGHM--VRTTVRDPEDLSKVGFLWELNGAEERLKIMK 58
           +P   VTG +G     + K L +       +  VR  +   K+G       A+    +  
Sbjct: 4   LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG-----GEAD----VFI 54

Query: 59  ADLLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIK-------------GTL 105
            D+    S + A QG+D +    S V              P                G  
Sbjct: 55  GDITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQK 114

Query: 106 NVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTI 165
           N + + K A  VK +V+     S+   +    ++ L   +                 K  
Sbjct: 115 NQIDAAKVAG-VKHIVVV---GSMGGTNPDHPLNKLGNGN-------------ILVWKRK 157

Query: 166 AEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVH 225
           AE    +   D G    ++    ++              +  ++ G   E   T    V 
Sbjct: 158 AE----QYLADSGTPYTIIRAGGLLDKEGG---------VRELLVGKDDELLQTDTKTVP 204

Query: 226 IDDVVGAHILAMEETRASGRL--ICSSSVAHWSPIIEM 261
             DV    I A+    A  +   + S      +P  + 
Sbjct: 205 RADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDF 242

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 90.4 bits (225), Expect = 5e-22
 Identities = 40/267 (14%), Positives = 75/267 (28%), Gaps = 68/267 (25%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           + G TG      +   +  G+ V   VRD   L   G             ++  D+L   
Sbjct: 8   IFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG--------PRPAHVVVGDVLQAA 59

Query: 66  SFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSS 125
             D+ + G D V            N++  T +    +G  N++++ K    V +VV  +S
Sbjct: 60  DVDKTVAGQDAVIVLLGT-----RNDLSPTTVMS--EGARNIVAAMKAHG-VDKVVACTS 111

Query: 126 CSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVN 185
              +                  DP                      ++ ++ G+  V V 
Sbjct: 112 AFLLW-----------------DPTKVPPRLQAVTDDHIRMH----KVLRESGLKYVAVM 150

Query: 186 PSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRASGR 245
           P       +  QP +    +                  +   D+    +  +      G 
Sbjct: 151 PPH-----IGDQPLTGAYTV--------TLDGRGPSRVISKHDLGHFMLRCLTTDEYDG- 196

Query: 246 LICSSSVAHWSPIIEMLKATYPSYPYE 272
                             +TYPS+ Y+
Sbjct: 197 -----------------HSTYPSHQYQ 206

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score = 93.0 bits (232), Expect = 5e-22
 Identities = 55/257 (21%), Positives = 82/257 (31%), Gaps = 65/257 (25%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           +TGG GFI  HL +AL+  G  V   V D  DL  V  +    G  + L+    +L    
Sbjct: 12  ITGGAGFIGGHLARALVASGEEVT--VLD--DLR-VPPMIPPEGTGKFLEKPVLELE--- 63

Query: 66  SFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPC-----IKGTLNVLSSCKKAKSVKRV 120
             +  +  V  V+H AS   VP       +   P      +    ++L+ C     V +V
Sbjct: 64  --ERDLSDVRLVYHLASHKSVPR------SFKQPLDYLDNVDSGRHLLALCTSVG-VPKV 114

Query: 121 VLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGID 180
           V+ S+   + Y   A  + P  E     P         YA +K   E  A    +     
Sbjct: 115 VVGST-CEV-Y-GQADTL-PTPEDSPLSPRSP------YAASKVGLEMVAGAHQRASVAP 164

Query: 181 MVVV-----------NPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG------- 222
            V +            P  +V             L   +   L         G       
Sbjct: 165 EVGIVRFFNVYGPGERPDALVP-----------RLCANL---LTRN-ELPVEGDGEQRRD 209

Query: 223 FVHIDDVVGAHILAMEE 239
           F +I DVV   +     
Sbjct: 210 FTYITDVVDKLVALANR 226

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 87.3 bits (216), Expect = 1e-20
 Identities = 30/241 (12%), Positives = 76/241 (31%), Gaps = 38/241 (15%)

Query: 5   CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
            + G TG   + +++   ++GH V   VR+   ++            + + I++ D+   
Sbjct: 4   GIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKIT---------QTHKDINILQKDIFDL 54

Query: 65  GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
                 +   + V           + ++             +++S         R+++  
Sbjct: 55  TL--SDLSDQNVVVDAYGISPDEAEKHVT---------SLDHLISVLNGTV-SPRLLVVG 102

Query: 125 SCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVV 184
             +S++   D      L ES             +Y  A+  A++     +         +
Sbjct: 103 GAASLQIDEDGN---TLLESKGLREAP------YYPTARAQAKQLEHLKSHQAEFSWTYI 153

Query: 185 NPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRASG 244
           +PS +  P    +     +    ++ G  G        F+ ++D   A +  +E      
Sbjct: 154 SPSAMFEP--GERTGDYQIGKDHLLFGSDGN------SFISMEDYAIAVLDEIERPNHLN 205

Query: 245 R 245
            
Sbjct: 206 E 206

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 87.4 bits (217), Expect = 1e-20
 Identities = 41/248 (16%), Positives = 82/248 (33%), Gaps = 63/248 (25%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME- 64
           + G TG +   L+K+L    + +    R  E + +             +K +  D+    
Sbjct: 5   IVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY----------NNVKAVHFDVDWTP 54

Query: 65  GSFDEAIQGVDGVFHTA-----SPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKR 119
               + + G+D + + +     S + V                G + ++ + +KA+ VKR
Sbjct: 55  EEMAKQLHGMDAIINVSGSGGKSLLKVDLY-------------GAVKLMQAAEKAE-VKR 100

Query: 120 VVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGI 179
            +L S+  S            L    W    +    +  Y  AK  A+     + K+  +
Sbjct: 101 FILLSTIFS------------LQPEKWIGAGFDALKD--YYIAKHFADLY---LTKETNL 143

Query: 180 DMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEE 239
           D  ++ P       L  +  + L+ I   V                I DV       +  
Sbjct: 144 DYTIIQPG-----ALTEEEATGLIDINDEVS-----------ASNTIGDVADTIKELVMT 187

Query: 240 TRASGRLI 247
             + G++I
Sbjct: 188 DHSIGKVI 195

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 86.6 bits (215), Expect = 3e-20
 Identities = 53/261 (20%), Positives = 96/261 (36%), Gaps = 55/261 (21%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           V G  G +A +L+  L +KGH     VR+ E   ++       GA +   I+ A+L  E 
Sbjct: 26  VVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPEL----RERGASD---IVVANL--EE 76

Query: 66  SFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSS 125
            F  A   +D V   A     P+    +  LID  + G +  +   +K   +KR ++ SS
Sbjct: 77  DFSHAFASIDAVVFAAG--SGPHTGADKTILID--LWGAIKTIQEAEKRG-IKRFIMVSS 131

Query: 126 CSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVN 185
             ++          P+N  H             Y  AK +A+       K   +D  +V 
Sbjct: 132 VGTVDPDQG-----PMNMRH-------------YLVAKRLAD----DELKRSSLDYTIVR 169

Query: 186 PSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRASGR 245
           P    GPL   + T  + +           + +     +   DV       +++    G+
Sbjct: 170 P----GPLSNEESTGKVTV---------SPHFSEITRSITRHDVAKVIAELVDQQHTIGK 216

Query: 246 L--ICSSSVAHWSPIIEMLKA 264
              + +       PI ++++ 
Sbjct: 217 TFEVLNGDT----PIAKVVEQ 233

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312

 Score = 86.9 bits (216), Expect = 8e-20
 Identities = 48/314 (15%), Positives = 105/314 (33%), Gaps = 33/314 (10%)

Query: 1   MPEYCVTGGTGFIAAHLVKALLDK-GHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKA 59
            P+  + G  G I   L + L    G           D+ K+      +G  E +  +  
Sbjct: 2   NPKILIIGACGQIGTELTQKLRKLYGTENVIAS----DIRKLNTDVVNSGPFEVVNALDF 57

Query: 60  DLLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKR 119
           +  +E   +     +  ++  A+ +    + N      D  +    +VL+  K  K +K+
Sbjct: 58  NQ-IEHLVEV--HKITDIYLMAALLSATAEKNPAFA-WDLNMNSLFHVLNLAKAKK-IKK 112

Query: 120 VVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGI 179
           +   SS +   +           +    +P         Y  +K   E+         G+
Sbjct: 113 IFWPSSIAV--F-GPTTPKENTPQYTIMEPSTV------YGISKQAGERWCEYYHNIYGV 163

Query: 180 DMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGE------YPNTTVGFVHIDDVVGAH 233
           D+  +    ++     P   +T   +    K +  +         T +  +++DD + A 
Sbjct: 164 DVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDAT 223

Query: 234 ILAMEETRASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCS------KQEGDNSPHSM 287
           I  M+      ++  S ++A  S     +      +  E   +      ++  D+ P S+
Sbjct: 224 INIMKAPVEKIKIHSSYNLAAMSFTPTEIANEIKKHIPEFTITYEPDFRQKIADSWPASI 283

Query: 288 DTSKLFELGFVGFK 301
           D S+  E     +K
Sbjct: 284 DDSQARED--WDWK 295

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 83.2 bits (205), Expect = 2e-18
 Identities = 36/253 (14%), Positives = 65/253 (25%), Gaps = 34/253 (13%)

Query: 6   VTGGTGFIAAHLVKALLDKGHM-----VRTTVRDPEDLSKVGFLWELNGAEERLKIMKAD 60
           + G TG I   L + L           V    R                 +  +  ++ D
Sbjct: 6   IVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW---------HEDNPINYVQCD 56

Query: 61  LLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKK-AKSVKR 119
           +         +  +  V H             +    +   K   NVL +      ++K 
Sbjct: 57  ISDPDDSQAKLSPLTDVTHVFYVTWANRST--EQENCEANSKMFRNVLDAVIPNCPNLKH 114

Query: 120 VVLTSSC-----SSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIA 174
           + L +           Y        P  E          + N +Y     + E     + 
Sbjct: 115 ISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLK----YMNFYYDLEDIMLE----EVE 166

Query: 175 KDCGIDMVVVNPSFVVGPLL--APQPTSTLLLILAMVKGLRGE--YPNTTVGFVHIDDVV 230
           K  G+   V  P  + G           TL +  A+ K       +      +    D  
Sbjct: 167 KKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCS 226

Query: 231 GAHILAMEETRAS 243
            A ++A     A+
Sbjct: 227 DADLIAEHHIWAA 239

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372

 Score = 82.5 bits (204), Expect = 5e-18
 Identities = 49/278 (17%), Positives = 99/278 (35%), Gaps = 39/278 (14%)

Query: 4   YCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLM 63
             + G  GFI  HL K +L+             D+     L +L    ER+   + D+ +
Sbjct: 27  VLILGVNGFIGHHLSKRILETTDWE--VFGM--DMQT-DRLGDLVK-HERMHFFEGDITI 80

Query: 64  EGSFDE-AIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVL 122
              + E  ++  D +    +             + +   +  L ++ S  K    K +V 
Sbjct: 81  NKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVF 138

Query: 123 TSSCSSIRYRHDAQQVSPLNES----HWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCG 178
            S+ S +      +Q  P   +      + P +       YA +K + ++  W    + G
Sbjct: 139 PST-SEVYGMCADEQFDPDASALTYGPINKPRWI------YACSKQLMDRVIWGYGME-G 190

Query: 179 IDMVVVNPSFVVGPLLAPQPTSTLLLILAMV------KGLRGEYPNTTVG-------FVH 225
           ++  +  P   +GP L    T       + V        +RGE   + V        F +
Sbjct: 191 LNFTLFRPFNWIGPGLDSIYTPK--EGSSRVVTQFLGHIVRGE-NISLVDGGSQKRAFTY 247

Query: 226 IDDVVGAHILAME--ETRASGRLICSSSVAHWSPIIEM 261
           +DD + A +  +E     A+G++    +  +   + E+
Sbjct: 248 VDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVREL 285

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 79.7 bits (196), Expect = 7e-18
 Identities = 38/240 (15%), Positives = 70/240 (29%), Gaps = 36/240 (15%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           V G TG   + +V     +GH V   VRDP+  +                +         
Sbjct: 5   VLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAA----------DRLGATVATLVKEPLV 54

Query: 66  SFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSS 125
             +  +  VD V    S         +             +++S  + +     V +  S
Sbjct: 55  LTEADLDSVDAVVDALSVPWGSGRGYLHLD-------FATHLVSLLRNSD-TLAVFILGS 106

Query: 126 CSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVN 185
            S      D   +    ES  S P        WY  A      E   +  +  ++ + ++
Sbjct: 107 ASLAMPGADHPMILDFPESAASQP--------WYDGALYQYY-EYQFLQMNANVNWIGIS 157

Query: 186 PSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRASGR 245
           PS           TS +     ++ G  G+        +   ++  A +  +E   A   
Sbjct: 158 PSEAFPS---GPATSYVAGKDTLLVGEDGQ------SHITTGNMALAILDQLEHPTAIRD 208

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345

 Score = 79.0 bits (195), Expect = 7e-17
 Identities = 44/258 (17%), Positives = 84/258 (32%), Gaps = 46/258 (17%)

Query: 4   YCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLM 63
             + G  GFI  HL + LL + H     +    D+     +            ++ D+ +
Sbjct: 3   VLILGVNGFIGNHLTERLLREDHYEVYGL----DIGSDA-ISRFLN-HPHFHFVEGDISI 56

Query: 64  EGSFDEAIQG-VDGVFHTASPVLVP-YDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVV 121
              + E      D V    +      Y  N      +   +  L ++  C K +  KR++
Sbjct: 57  HSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRV-FELDFEENLRIIRYCVKYR--KRII 113

Query: 122 LTSSCSSIRYRHDAQQVSPLNESHW-------SDPDYCKHYNLWYAYAKTIAEKEAWRIA 174
             S+ S + Y          +E H        + P +       Y+ +K + ++  W   
Sbjct: 114 FPST-SEV-Y-GMC-SDKYFDEDHSNLIVGPVNKPRWI------YSVSKQLLDRVIWAYG 163

Query: 175 KDCGIDMVVVNPSFVVGPLLAPQPTSTLL-------LILAMVKGLRGEYPNTTVG----- 222
           +  G+   +  P   +GP L     + +        LI   +  + G  P   +      
Sbjct: 164 EKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLI---LNLVEGS-PIKLIDGGKQK 219

Query: 223 --FVHIDDVVGAHILAME 238
             F  I D + A    +E
Sbjct: 220 RCFTDIRDGIEALYRIIE 237

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score = 78.5 bits (194), Expect = 9e-17
 Identities = 55/329 (16%), Positives = 103/329 (31%), Gaps = 64/329 (19%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRD-------PEDLSKVGFLWELNGAEERLKIMK 58
           +TGG GF+ ++L     +     +  V D         +          N    + +++ 
Sbjct: 15  ITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIA 74

Query: 59  ADLLMEGSFDEAI-QGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSV 117
           AD+              D +FH A+       N  Q  ++    +  LN+L   +  K  
Sbjct: 75  ADINNPLDLRRLEKLHFDYLFHQAAVSDTTMLN--QELVMKTNYQAFLNLLEIARSKK-- 130

Query: 118 KRVVLTSSCSSIRY------RHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAW 171
            +V+  SS + + Y          +  SP N                Y ++K   ++   
Sbjct: 131 AKVIYASS-AGV-YGNTKAPNVVGKNESPEN------V---------YGFSKLCMDEFVL 173

Query: 172 RIAKDCGIDMVVV---NPSFVVGPLLAPQPTST-----LLLILAMVKGLRGEYP------ 217
             +       V +   N   V GP              L L L     +  +        
Sbjct: 174 SHSN--DNVQVGLRYFN---VYGP--REFYKEKTASMVLQLALGA---MAFKEVKLFEFG 223

Query: 218 NTTVGFVHIDDVVGAHILAMEETRASGRLICSSSVAH-WSPIIEMLKATYPSYPYESKCS 276
                FV+I+DV+ A++ AM + + SG      S A  ++ I+ +LK     +      +
Sbjct: 224 EQLRDFVYIEDVIQANVKAM-KAQKSGVYNVGYSQARSYNEIVSILKEHLGDFKVTYIKN 282

Query: 277 KQEGDNSPHSM-DTSKLFE-LGFVGFKSV 303
                   H+          L +     +
Sbjct: 283 PYAFF-QKHTQAHIEPTILDLDYTPLYDL 310

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 74.8 bits (184), Expect = 5e-16
 Identities = 30/184 (16%), Positives = 60/184 (32%), Gaps = 40/184 (21%)

Query: 6   VTGGTGFIAAHLVKALLDK-GHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
           + G  G IA H++  L DK         R P  + K              +I+  D+L  
Sbjct: 28  ILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP--------YPTNSQIIMGDVLNH 79

Query: 65  GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
            +  +A+QG D V+   +   +                   +V+++ K    VKR++   
Sbjct: 80  AALKQAMQGQDIVYANLTGEDLDI--------------QANSVIAAMKACD-VKRLIFVL 124

Query: 125 SCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVV 184
           S              P     W++    +              + A    +  G++  ++
Sbjct: 125 SL-------GIYDEVPGKFVEWNNAVIGEPLK---------PFRRAADAIEASGLEYTIL 168

Query: 185 NPSF 188
            P++
Sbjct: 169 RPAW 172

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478

 Score = 76.9 bits (189), Expect = 6e-16
 Identities = 43/256 (16%), Positives = 75/256 (29%), Gaps = 34/256 (13%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTV------RDPED--------LSKVGF---LWELN 48
           +TG TGF+  +LV  LL +   V   +         ED                      
Sbjct: 78  LTGATGFLGRYLVLELLRRLD-VDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKE 136

Query: 49  GAEERLKIMKADL------LMEGSFDEAIQGVDGVFHTASPV-LVPYDNNIQATLIDPCI 101
            A +RL+++  D       L +  +    + VD +  +A+ V   PY       L  P +
Sbjct: 137 LAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPY-----HELFGPNV 191

Query: 102 KGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSD-PDYCKHYNLWYA 160
            GT  ++      K +K     S+         +      +    S        +   Y 
Sbjct: 192 AGTAELIRIALTTK-LKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYG 250

Query: 161 YAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLR--GEYPN 218
            +K   E         C + + V     ++         +    +  MV  L   G  P 
Sbjct: 251 TSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATGIAPR 310

Query: 219 TTVGFVHIDDVVGAHI 234
           +        +   AH 
Sbjct: 311 SFYEPDSEGNRQRAHF 326

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 75.9 bits (187), Expect = 8e-16
 Identities = 51/325 (15%), Positives = 93/325 (28%), Gaps = 57/325 (17%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPE--DLSKVGFLWELNGAEERLKIMKADLLM 63
           + G  G +   L + L+  G +    V      D+ +       +G    +    ADL  
Sbjct: 19  IIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSG---AVDARAADLSA 75

Query: 64  EGSFDEAIQ-GVDGVFHTASPVLVP---------YDNNIQATLIDPCIKGTLNVLSSCKK 113
            G  ++ ++   D +FH A+ ++           Y  N+          GT  +  + + 
Sbjct: 76  PGEAEKLVEARPDVIFHLAA-IVSGEAELDFDKGYRINLD---------GTRYLFDAIRI 125

Query: 114 AKS----VKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKE 169
           A        RVV TSS +   +        P+ +   + P         Y   K I E  
Sbjct: 126 ANGKDGYKPRVVFTSSIAV--FGAPLPY--PIPDEFHTTPLTS------YGTQKAICELL 175

Query: 170 AWRIAKDCGIDMVVVNPSFVVGPLLAP-QPTSTLL--LILAMVKGLRGEYP---NTTVGF 223
               ++    D + +    +      P    S     ++   + G     P   +     
Sbjct: 176 LSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWH 235

Query: 224 VHIDDVVGAHILAME---ETRASGRLICSSSVAHWSP--IIEMLKATYPS-----YPYES 273
                 VG  I       E     R +    +   +    IE L+             E 
Sbjct: 236 ASPRSAVGFLIHGAMIDVEKVGPRRNLSMPGL-SATVGEQIEALRKVAGEKAVALIRREP 294

Query: 274 KCSKQE-GDNSPHSMDTSKLFELGF 297
                   +      +  +  ELGF
Sbjct: 295 NEMIMRMCEGWAPGFEAKRARELGF 319

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score = 75.7 bits (186), Expect = 1e-15
 Identities = 38/278 (13%), Positives = 73/278 (26%), Gaps = 68/278 (24%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           +TG  GF+  +L   L          V       ++                        
Sbjct: 5   ITGAKGFVGKNLKADLTSTTDHHIFEVHRQTKEEEL------------------------ 40

Query: 66  SFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSS 125
             + A+   D + H A    V    + +       +    +VL    +    K  +L SS
Sbjct: 41  --ESALLKADFIVHLAG---VNRPEHDKEF-SLGNVSYLDHVLDILTRNT-KKPAILLSS 93

Query: 126 CSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVN 185
                             S  +  D        Y  +K   E+     A++ G  + +  
Sbjct: 94  ------------------SIQATQDNP------YGESKLQGEQLLREYAEEYGNTVYIYR 129

Query: 186 PSFVVGPLLAPQPTSTLLLILAMVKGLRGE-----YPNTTVGFVHIDDVVGAHILAMEET 240
              + G    P   S +      +   R E       N  +   ++DD+V     A+E T
Sbjct: 130 WPNLFGKWCKPNYNSVIATFCYKI--ARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGT 187

Query: 241 RASGRLIC------SSSVAHWSPIIEMLKATYPSYPYE 272
                 +         ++     ++   K +       
Sbjct: 188 PTIENGVPTVPNVFKVTLGEIVDLLYKFKQSRLDRTLP 225

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 70.2 bits (172), Expect = 6e-14
 Identities = 33/253 (13%), Positives = 66/253 (26%), Gaps = 57/253 (22%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLL-ME 64
           V G TG   A L++     GH VR  V   +       L  +        + +  LL   
Sbjct: 10  VVGATGRQGASLIRVAAAVGHHVRAQVHSLKG-LIAEELQAIPNVT----LFQGPLLNNV 64

Query: 65  GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
              D   +G    F     +        +  +         ++  + K+A +++  + +S
Sbjct: 65  PLMDTLFEGAHLAF-----INTTSQAGDEIAI-------GKDLADAAKRAGTIQHYIYSS 112

Query: 125 SCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVV 184
                            + S +        +       K   E       +  G+    V
Sbjct: 113 M---------------PDHSLYGPWPAVPMWA-----PKFTVEN----YVRQLGLPSTFV 148

Query: 185 NPSF-------VVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVG---AHI 234
                      +  PL   +                   P+  + ++  +  VG     I
Sbjct: 149 YAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFD-----PDIPLPWLDAEHDVGPALLQI 203

Query: 235 LAMEETRASGRLI 247
                 + +G  I
Sbjct: 204 FKDGPQKWNGHRI 216

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 69.0 bits (169), Expect = 1e-13
 Identities = 34/231 (14%), Positives = 64/231 (27%), Gaps = 42/231 (18%)

Query: 9   GTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFD 68
           G G +   L + L  +GH V    R  +                 ++ + AD+    +  
Sbjct: 10  GCGDLGLELARRLTAQGHEVTGLRRSAQ------------PMPAGVQTLIADVTRPDTLA 57

Query: 69  EAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSS 128
             +     +        V              ++G  N LS+ + A  ++ V   SS   
Sbjct: 58  SIVHLRPEILVYC----VAASEYSDEHYRLSYVEGLRNTLSALEGA-PLQHVFFVSSTGV 112

Query: 129 IRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKE-AWRIAKDCGIDMVVVNPS 187
             Y  + ++   L+E                   K + E E              ++  S
Sbjct: 113 --YGQEVEEW--LDEDTPPIAK--------DFSGKRMLEAEALLA-----AYSSTILRFS 155

Query: 188 FVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAME 238
            + GP         L +I       +    N     +H DD        ++
Sbjct: 156 GIYGP-------GRLRMIRQAQTPEQWPARNAWTNRIHRDDGAAFIAYLIQ 199

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 66.6 bits (162), Expect = 4e-13
 Identities = 23/188 (12%), Positives = 56/188 (29%), Gaps = 38/188 (20%)

Query: 6   VTGGTGFIAAHLVKALLDK-GHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
           + G  G IA  L   LL      +    R  +       +       ER+ +++      
Sbjct: 10  ILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEII-----DHERVTVIEGSFQNP 64

Query: 65  GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
           G  ++A+   + VF  A        + ++A                     +++RV+  S
Sbjct: 65  GXLEQAVTNAEVVFVGAMESGSDMASIVKAL-----------------SRXNIRRVIGVS 107

Query: 125 SCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVV 184
                          P+    W+  +    Y      A+         + ++  ++  ++
Sbjct: 108 M-------AGLSGEFPVALEKWTFDNLPISYVQGERQAR--------NVLRESNLNYTIL 152

Query: 185 NPSFVVGP 192
             +++   
Sbjct: 153 RLTWLYND 160

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404

 Score = 67.9 bits (166), Expect = 5e-13
 Identities = 59/356 (16%), Positives = 97/356 (27%), Gaps = 78/356 (21%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRT----TVRDPEDLSKVGFLWELNGAEERLKIMKADL 61
           V GG G+        L  K + V        R  +    +  L  +    +R+   KA  
Sbjct: 16  VIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT 75

Query: 62  LMEGSF---D----EAIQGV------DGVFHTASPVLVPY------------DNNIQATL 96
                    D    E +         D V H       PY             NN+    
Sbjct: 76  GKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVI--- 132

Query: 97  IDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVS--PLNESHWSDP-DYCK 153
                 GTLNVL + K+      +V   +       +   +     +  +  +D   Y K
Sbjct: 133 ------GTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPK 186

Query: 154 HYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQ---------------- 197
             + +Y  +K           K  GI    +N   V G                      
Sbjct: 187 QASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVF 246

Query: 198 PTSTLLLILAMVKGLR----GE-YPNTTVGFVHIDDVVGAHILAMEETRASGRLIC---- 248
            T+     +    G      G+     T G++ I D V    +A+     +G        
Sbjct: 247 GTALNRFCVQAAVGHPLTVYGKGGQ--TRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQF 304

Query: 249 --SSSVAHWSPIIEMLKATYPSYPYESKCSKQ-----EGDNSPHSMDTSKLFELGF 297
               SV     +  ++         + K         E +   ++   +KL ELG 
Sbjct: 305 TEQFSVNE---LASLVTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLMELGL 357

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* Length = 343

 Score = 67.0 bits (164), Expect = 8e-13
 Identities = 65/251 (25%), Positives = 103/251 (41%), Gaps = 47/251 (18%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLS--KVGFLWELNGAEERLKIMKADLLM 63
           +TGG GF+ +HL   L+  GH V  TV D  +    +   +    G  E  +++  D++ 
Sbjct: 32  ITGGAGFVGSHLTDKLMMDGHEV--TVVD--NFFTGRKRNVEHWIG-HENFELINHDVV- 85

Query: 64  EGSFDEAIQGVDGVFHTASPVLVP-YDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVL 122
               +     VD ++H ASP   P Y  N   TL      GTLN+L   K+     R++L
Sbjct: 86  ----EPLYIEVDQIYHLASPASPPNYMYNPIKTL-KTNTIGTLNMLGLAKRVG--ARLLL 138

Query: 123 TSSCSSIRYRHDAQQVSPLNESHW-----SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC 177
            S+ S + Y     +V P +E +W       P  C      Y   K +AE   +   K  
Sbjct: 139 AST-SEV-YGD--PEVHPQSEDYWGHVNPIGPRAC------YDEGKRVAETMCYAYMKQE 188

Query: 178 GIDMVVVNPSFVVGPLLAPQP---TSTLLLILAMVKGLRGEYPNTTVG-------FVHID 227
           G+++ V       GP +        S       +++ L+GE P T  G       F ++ 
Sbjct: 189 GVEVRVARIFNTFGPRMHMNDGRVVSNF-----ILQALQGE-PLTVYGSGSQTRAFQYVS 242

Query: 228 DVVGAHILAME 238
           D+V   +  M 
Sbjct: 243 DLVNGLVALMN 253

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330

 Score = 65.2 bits (160), Expect = 3e-12
 Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 33/134 (24%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADL---- 61
           + GG G+I +H VK L+D+G  V   V D  +L   G    +    E  K    DL    
Sbjct: 6   ICGGAGYIGSHAVKKLVDEGLSV--VVVD--NLQT-GHEDAI---TEGAKFYNGDLRDKA 57

Query: 62  LMEGSFDEAIQGVDGVFHTASPVLVP---------YDNNIQATLIDPCIKGTLNVLSSCK 112
            +   F +  + ++ V H A+  LV          Y+NN+          G L +L    
Sbjct: 58  FLRDVFTQ--ENIEAVMHFAADSLVGVSMEKPLQYYNNNVY---------GALCLLEVMD 106

Query: 113 KAKSVKRVVLTSSC 126
           + K V + + +S+ 
Sbjct: 107 EFK-VDKFIFSSTA 119

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 64.7 bits (158), Expect = 3e-12
 Identities = 43/249 (17%), Positives = 82/249 (32%), Gaps = 52/249 (20%)

Query: 6   VTGGTGFIAAHLVKALLDKG-HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
           V GGTG     + + LL+ G   VR   R+P    K      L GAE    +++ D   +
Sbjct: 10  VFGGTGAQGGSVARTLLEDGTFKVRVVTRNPR--KKAAKELRLQGAE----VVQGDQDDQ 63

Query: 65  GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
              + A+ G    F     V   +++  Q    +  +K    +    ++   +  VV + 
Sbjct: 64  VIMELALNGAYATF----IVTNYWESCSQ----EQEVKQGKLLADLARRLG-LHYVVYSG 114

Query: 125 SCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVV 184
             +             L  +H+                K   E       +D G+ M  V
Sbjct: 115 LEN-----IKKLTAGRLAAAHFD--------------GKGEVE----EYFRDIGVPMTSV 151

Query: 185 NPSF----VVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDV--VGAHILAME 238
                   ++   L  +       +L++         +  +  + + D+  V   +L M 
Sbjct: 152 RLPCYFENLLSHFLPQKAPDGKSYLLSLPT------GDVPMDGMSVSDLGPVVLSLLKMP 205

Query: 239 ETRASGRLI 247
           E +  G+ I
Sbjct: 206 E-KYVGQNI 213

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 63.5 bits (155), Expect = 9e-12
 Identities = 36/237 (15%), Positives = 71/237 (29%), Gaps = 55/237 (23%)

Query: 6   VTGGTGFIAAHLVKALLDKG-HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
           +TG TG +  H+    +          VR+ E   KV   W       R    + D   +
Sbjct: 5   LTGATGHLGTHITNQAIANHIDHFHIGVRNVE---KVPDDWR-GKVSVR----QLDYFNQ 56

Query: 65  GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
            S  EA +G+D V    S +   +    +            N++ + K++  V  ++   
Sbjct: 57  ESMVEAFKGMDTVVFIPSIIHPSFKRIPEVE----------NLVYAAKQSG-VAHIIFIG 105

Query: 125 SCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVV 184
             +             ++                       A     R+    GID   V
Sbjct: 106 YYAD-----QHNNPFHMSPYFG------------------YAS----RLLSTSGIDYTYV 138

Query: 185 NPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDV--VGAHILAMEE 239
             +  + PL    P      ++ M   L     +  + ++  +D+      I+   +
Sbjct: 139 RMAMYMDPLKPYLPE-----LMNM-HKLIYPAGDGRINYITRNDIARGVIAIIKNPD 189

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 63.8 bits (155), Expect = 9e-12
 Identities = 46/242 (19%), Positives = 81/242 (33%), Gaps = 49/242 (20%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDP---EDLSKVGFL--WELNGAEERLKIMKAD 60
           + G TG+I  H+ KA LD GH     VR+     +  K   L  ++ +GA     I+   
Sbjct: 9   LIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGAN----IVHGS 64

Query: 61  LLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRV 120
           +    S  EA++ VD V  T   + +                  +N++ + K+  +VKR 
Sbjct: 65  IDDHASLVEAVKNVDVVISTVGSLQIE---------------SQVNIIKAIKEVGTVKRF 109

Query: 121 VLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGID 180
             +   + +   H  +    + E                         +  R  +  GI 
Sbjct: 110 FPSEFGNDVDNVHAVEPAKSVFEVK----------------------AKVRRAIEAEGIP 147

Query: 181 MVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDV--VGAHILAME 238
              V+ +   G  L     + L         + G+  N  V FV  +D+       +   
Sbjct: 148 YTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGD-GNARVVFVKEEDIGTFTIKAVDDP 206

Query: 239 ET 240
            T
Sbjct: 207 RT 208

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 63.4 bits (154), Expect = 9e-12
 Identities = 32/158 (20%), Positives = 58/158 (36%), Gaps = 17/158 (10%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERL--KIMKADLLM 63
           + G TG I  H+V A +  G+     VR     +      EL    + L   +++ D+  
Sbjct: 7   ILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDIND 66

Query: 64  EGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLT 123
             +  +AI+ VD V   A  +L+      Q  +I            + K+A +VK+   +
Sbjct: 67  HETLVKAIKQVDIVICAAGRLLIED----QVKIIK-----------AIKEAGNVKKFFPS 111

Query: 124 SSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAY 161
                +      + V  + E   S     +   + Y Y
Sbjct: 112 EFGLDVDRHDAVEPVRQVFEEKASIRRVIEAEGVPYTY 149

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 63.0 bits (153), Expect = 1e-11
 Identities = 29/160 (18%), Positives = 57/160 (35%), Gaps = 12/160 (7%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           + GGTG+I   +V A +  GH      R     +       L   +   K+++A L    
Sbjct: 9   IVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQ 68

Query: 66  SFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSS 125
              +A++ VD V    +  ++ +    Q  L++           + K+A ++KR + +  
Sbjct: 69  RLVDALKQVDVVISALAGGVLSHHILEQLKLVE-----------AIKEAGNIKRFLPSEF 117

Query: 126 CSSIRYRHDAQQ-VSPLNESHWSDPDYCKHYNLWYAYAKT 164
                    A Q  S             +  ++ Y Y  +
Sbjct: 118 GMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSS 157

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 62.7 bits (153), Expect = 1e-11
 Identities = 42/238 (17%), Positives = 76/238 (31%), Gaps = 59/238 (24%)

Query: 6   VTGGTGFIAAHLVKALLDK--GHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLM 63
           +TG TG +  +++++L+       +   VR+P    K   L    G   R    +AD   
Sbjct: 4   ITGATGQLGHYVIESLMKTVPASQIVAIVRNPA---KAQALAA-QGITVR----QADYGD 55

Query: 64  EGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLT 123
           E +   A+QGV+ +       L+       ++ +        NV+++ K A  VK +  T
Sbjct: 56  EAALTSALQGVEKLL------LIS------SSEVGQRAPQHRNVINAAKAAG-VKFIAYT 102

Query: 124 SSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVV 183
           S        H       L + H                     E    ++  D GI   +
Sbjct: 103 SL------LHADTSPLGLADEHIE------------------TE----KMLADSGIVYTL 134

Query: 184 VNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDV--VGAHILAMEE 239
           +   +     LA  P       L       G   +  +      D     A +++   
Sbjct: 135 LRNGWYSENYLASAPA-----ALEH-GVFIGAAGDGKIASATRADYAAAAARVISEAG 186

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 62.7 bits (153), Expect = 2e-11
 Identities = 32/143 (22%), Positives = 49/143 (34%), Gaps = 27/143 (18%)

Query: 6   VTGGTGFIAAHLVKALLDK--GHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLM 63
           VTG TG +   +++ LL K     +   VR+ E   K   L +  G E R      D   
Sbjct: 5   VTGATGQLGGLVIQHLLKKVPASQIIAIVRNVE---KASTLAD-QGVEVR----HGDYNQ 56

Query: 64  EGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLT 123
             S  +A  GV  +   + P        +Q            NV+ + + A  VK +  T
Sbjct: 57  PESLQKAFAGVSKLLFISGPHYDNTLLIVQHA----------NVVKAARDAG-VKHIAYT 105

Query: 124 SSCSSIRYRHDAQQVSPLNESHW 146
                       + + PL   H 
Sbjct: 106 GY------AFAEESIIPLAHVHL 122

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* Length = 397

 Score = 59.2 bits (144), Expect = 4e-10
 Identities = 37/203 (18%), Positives = 64/203 (31%), Gaps = 59/203 (29%)

Query: 6   VTGGTGFIAAHLVKALL-DKGHMV----------RTTVRDPEDLSKVGFLWELNGAEERL 54
           V GG G+I +H V+ALL D  H V            +       +    L + +G +   
Sbjct: 7   VCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPW 66

Query: 55  KIMKADL---------LMEGSFDEAIQGVDGVFHTASPVLVP---------YDNNIQATL 96
               A L          + G F      +D V H  + + V          YDNN+    
Sbjct: 67  ADRYAALEVGDVRNEDFLNGVFTRH-GPIDAVVHMCAFLAVGESVRDPLKYYDNNVV--- 122

Query: 97  IDPCIKGTLNVLSSCKKAKSVKRVVLTSSCS---SIRYRHDAQQVSPLNESHWSDP---- 149
                 G L +L +    K   +++ +SS +   +      +    P++ +    P    
Sbjct: 123 ------GILRLLQAMLLHK-CDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPY 175

Query: 150 ------------DYCKHYNLWYA 160
                       D  + Y +   
Sbjct: 176 GESKLIAERMIRDCAEAYGIKGI 198

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 56.5 bits (136), Expect = 2e-09
 Identities = 31/159 (19%), Positives = 55/159 (34%), Gaps = 19/159 (11%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           + GGTG+I  H+VK  L  GH      R     + +   ++  GA     I+K +L    
Sbjct: 16  IFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGA----IIVKGELDEHE 71

Query: 66  SFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSS 125
              E ++ VD V    +   +      Q  +++           + K A ++KR + +  
Sbjct: 72  KLVELMKKVDVVISALAFPQILD----QFKILE-----------AIKVAGNIKRFLPSDF 116

Query: 126 CSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKT 164
                  +       L E         +  N+ Y Y   
Sbjct: 117 GVEEDRINALPPFEALIERKRMIRRAIEEANIPYTYVSA 155

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score = 55.3 bits (133), Expect = 6e-09
 Identities = 30/240 (12%), Positives = 69/240 (28%), Gaps = 43/240 (17%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEER-LKIMKADLLME 64
           + GGTG+I   +V+A L   H      R     S    +          + I++ ++   
Sbjct: 9   IYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEH 68

Query: 65  GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
                 ++ VD V       ++      Q  +I+           + K A ++KR + + 
Sbjct: 69  EKMVSVLKQVDIVISALPFPMISS----QIHIIN-----------AIKAAGNIKRFLPSD 113

Query: 125 SCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIA-KDCGIDMVV 183
                 +  +  ++ PL                   +   + +K   R A +   +    
Sbjct: 114 ------FGCEEDRIKPL-----------------PPFESVLEKKRIIRRAIEAAALPYTY 150

Query: 184 VNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDV--VGAHILAMEETR 241
           V+ +      +      +          + G    T     + +D+      +       
Sbjct: 151 VSANCFGAYFVNYLLHPSPHPNRNDDIVIYGT-GETKFVLNYEEDIAKYTIKVACDPRCC 209

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 55.0 bits (132), Expect = 8e-09
 Identities = 23/162 (14%), Positives = 49/162 (30%), Gaps = 20/162 (12%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRD-PEDLSKVGFLWELNGAEERLKIMKADLLME 64
           + G TGFI   +  A LD         R  P   SK      L   ++   I+   +  +
Sbjct: 15  IAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKAL--EDKGAIIVYGLINEQ 72

Query: 65  GSFDEAIQG--VDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVL 122
            + ++ ++   +D V  T     +      Q  L+            + K   ++KR + 
Sbjct: 73  EAMEKILKEHEIDIVVSTVGGESILD----QIALVK-----------AMKAVGTIKRFLP 117

Query: 123 TSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKT 164
           +     +      +    +           +   + + Y   
Sbjct: 118 SEFGHDVNRADPVEPGLNMYREKRRVRQLVEESGIPFTYICC 159

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516

 Score = 55.1 bits (133), Expect = 9e-09
 Identities = 42/254 (16%), Positives = 81/254 (31%), Gaps = 60/254 (23%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           +TG  G +   L   L   GH V   VR      K    W+                   
Sbjct: 152 ITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKR--FWD----------------PLN 193

Query: 66  SFDEAIQGVDGVFHTA-SPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
              + + G D + H A  P+   ++++ +  + +  +  T  +     ++     ++   
Sbjct: 194 PASDLLDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMI--- 250

Query: 125 SCSSIRYRHDAQQVSPLNESHWSDPDY----CKHYNLWYAYAKTIAEKEAWRIAKDCGID 180
           S S++ +    +    L E   S  D+    C+    W        E      A D G  
Sbjct: 251 SASAVGFYGHDRGDEILTEESESGDDFLAEVCRD---W--------EHATAP-ASDAGKR 298

Query: 181 MVVVNPSFVVGP---LLAPQPTSTLLLILAMVKGLRGEYPNTTVG-------FVHIDDVV 230
           +  +     +     +L       L  + +   GL G       G       ++ IDD+ 
Sbjct: 299 VAFIRTGVALSGRGGMLPL-----LKTLFST--GLGG-----KFGDGTSWFSWIAIDDLT 346

Query: 231 GAHILAMEETRASG 244
             +  A+ + + SG
Sbjct: 347 DIYYRAIVDAQISG 360

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* Length = 338

 Score = 54.8 bits (133), Expect = 9e-09
 Identities = 38/141 (26%), Positives = 56/141 (39%), Gaps = 40/141 (28%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRD------PEDLSKVGFLWELNGAEERLKIMKA 59
           VTGG+G+I +H    LL  GH V   + D         L  +     L G  +    ++ 
Sbjct: 5   VTGGSGYIGSHTCVQLLQNGHDV--IILDNLCNSKRSVLPVIE---RLGG--KHPTFVEG 57

Query: 60  DLL----MEGSFDEAIQGVDGVFHTA-------SPVLVP---YDNNIQATLIDPCIKGTL 105
           D+     M     +    +D V H A       S V  P   YDNN+          GTL
Sbjct: 58  DIRNEALMTEILHD--HAIDTVIHFAGLKAVGES-VQKPLEYYDNNVN---------GTL 105

Query: 106 NVLSSCKKAKSVKRVVLTSSC 126
            ++S+ + A  VK  + +SS 
Sbjct: 106 RLISAMRAAN-VKNFIFSSSA 125

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} Length = 341

 Score = 54.4 bits (132), Expect = 1e-08
 Identities = 33/141 (23%), Positives = 55/141 (39%), Gaps = 40/141 (28%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRD------PEDLSKVGFLWELNGAEERLKIMKA 59
           VTGG G+I +H    LL  G+ V   + D       E ++++    ++ G  +     + 
Sbjct: 10  VTGGAGYIGSHTAVELLAHGYDV--VIADNLVNSKREAIARIE---KITG--KTPAFHET 62

Query: 60  DLL----MEGSFDEAIQGVDGVFHTA-------SPVLVP---YDNNIQATLIDPCIKGTL 105
           D+     +   FD     +    H A       S V  P   Y NN+            L
Sbjct: 63  DVSDERALARIFDA--HPITAAIHFAALKAVGES-VAKPIEYYRNNLD---------SLL 110

Query: 106 NVLSSCKKAKSVKRVVLTSSC 126
           ++L   ++   VKR+V +SS 
Sbjct: 111 SLLRVMRERA-VKRIVFSSSA 130

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* Length = 348

 Score = 54.0 bits (131), Expect = 1e-08
 Identities = 35/144 (24%), Positives = 54/144 (37%), Gaps = 40/144 (27%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWE-----LNGAEE----RLKI 56
           VTGG G+I +H V  LL+ G++    V D  +              L   +E     ++ 
Sbjct: 7   VTGGAGYIGSHTVLELLEAGYLP--VVID--NFHNAFRGGGSLPESLRRVQELTGRSVEF 62

Query: 57  MKADLL----MEGSFDEAIQGVDGVFHTA-------SPVLVP---YDNNIQATLIDPCIK 102
            + D+L    ++  F +       V H A       S V  P   Y  N+          
Sbjct: 63  EEMDILDQGALQRLFKK--YSFMAVIHFAGLKAVGES-VQKPLDYYRVNLT--------- 110

Query: 103 GTLNVLSSCKKAKSVKRVVLTSSC 126
           GT+ +L   K    VK +V +SS 
Sbjct: 111 GTIQLLEIMKAHG-VKNLVFSSSA 133

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699

 Score = 53.6 bits (129), Expect = 3e-08
 Identities = 37/160 (23%), Positives = 61/160 (38%), Gaps = 40/160 (25%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRD------PEDLSKVGFLWELNGAEERLKIMKA 59
           VTGG G+I +H V  L++ G+     V D       + ++++     L      +   + 
Sbjct: 16  VTGGAGYIGSHTVVELIENGYDC--VVADNLSNSTYDSVARLE---VLTK--HHIPFYEV 68

Query: 60  DLL----MEGSFDEAIQGVDGVFHTA-------SPVLVP---YDNNIQATLIDPCIKGTL 105
           DL     +E  F E    +D V H A       S   +P   Y NNI          GT+
Sbjct: 69  DLCDRKGLEKVFKE--YKIDSVIHFAGLKAVGES-TQIPLRYYHNNIL---------GTV 116

Query: 106 NVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH 145
            +L   ++   V + V +SS +          + P+ E  
Sbjct: 117 VLLELMQQYN-VSKFVFSSSATVYGDATRFPNMIPIPEEC 155

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 51.7 bits (124), Expect = 6e-08
 Identities = 36/254 (14%), Positives = 62/254 (24%), Gaps = 46/254 (18%)

Query: 1   MPEYCVTGGTGFIAAHLVKALLDKGHM--VRTTVRDPEDLSKVGFLWELNGAEERLKIMK 58
                + G +G     L+K +L++G    V    R                A + +    
Sbjct: 18  NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFD--------EEAYKNVNQEV 69

Query: 59  ADLLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVK 118
            D      +  A QG D  F                 +        L      K     K
Sbjct: 70  VDFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRV---DRDYVLKSAELAKAGG-CK 125

Query: 119 RVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCG 178
              L SS  +             ++S                Y +   E E     ++  
Sbjct: 126 HFNLLSSKGA-------------DKSSNFL------------YLQVKGEVE--AKVEELK 158

Query: 179 ID-MVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAM 237
            D   V  P  ++      +P   L+        L       +   V +  VV A +  +
Sbjct: 159 FDRYSVFRPGVLLCDRQESRPGEWLVRKF--FGSLPD--SWASGHSVPVVTVVRAMLNNV 214

Query: 238 EETRASGRLICSSS 251
              R     +  + 
Sbjct: 215 VRPRDKQMELLENK 228

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286

 Score = 49.9 bits (119), Expect = 3e-07
 Identities = 38/239 (15%), Positives = 79/239 (33%), Gaps = 45/239 (18%)

Query: 9   GTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFD 68
           G G+ A  L +AL  +G  +  T R+P+ +  +      +GAE         LL  G  +
Sbjct: 12  GHGYTARVLSRALAPQGWRIIGTSRNPDQMEAI----RASGAE--------PLLWPGE-E 58

Query: 69  EAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSS 128
            ++ GV  +  + +P              DP +    + +++  +A   + V   S+ + 
Sbjct: 59  PSLDGVTHLLISTAP--------DSGG--DPVLAALGDQIAA--RAAQFRWVGYLSTTAV 106

Query: 129 IRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSF 188
             Y         ++E+    P   +              ++ W+      + + V   + 
Sbjct: 107 --YGDHDGAW--VDETTPLTPTAARGRWRV-------MAEQQWQ--AVPNLPLHVFRLAG 153

Query: 189 VVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRASGRLI 247
           + G      P       L      R   P      +H++D+    + A       G + 
Sbjct: 154 IYG------PGRGPFSKLGKGGIRRIIKPGQVFSRIHVEDIAQV-LAASMARPDPGAVY 205

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Length = 357

 Score = 49.8 bits (119), Expect = 4e-07
 Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 5/122 (4%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           VTG TGF    L   L   G  V+           V  L+E     + ++    D+  + 
Sbjct: 14  VTGHTGFKGGWLSLWLQTMGATVKGYSLTAP---TVPSLFETARVADGMQSEIGDIRDQN 70

Query: 66  SFDEAIQGV--DGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLT 123
              E+I+    + VFH A+  LV    +         + GT+ +L + +    VK VV  
Sbjct: 71  KLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNI 130

Query: 124 SS 125
           +S
Sbjct: 131 TS 132

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344

 Score = 48.4 bits (116), Expect = 1e-06
 Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 27/132 (20%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTV--RDP---EDLSKVGFLWELNGAEERLKIMKAD 60
           +TGGTG      V+ +LD  +  +  V  RD     +++      E N  + R++    D
Sbjct: 26  ITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAM-----EFN--DPRMRFFIGD 78

Query: 61  LLMEGSFDEAIQGVDGVFHTASPVLVP---YDNNIQATLIDPCIK----GTLNVLSSCKK 113
           +      + A++GVD   H A+   VP   Y N ++      CIK    G  NV+++C K
Sbjct: 79  VRDLERLNYALEGVDICIHAAALKHVPIAEY-NPLE------CIKTNIMGASNVINACLK 131

Query: 114 AKSVKRVVLTSS 125
              + +V+  S+
Sbjct: 132 NA-ISQVIALST 142

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 Length = 347

 Score = 46.0 bits (110), Expect = 6e-06
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 16/132 (12%)

Query: 1   MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAE--ERLKIMK 58
           M +  +TGG GF+ ++L    L +G  +   V D  +LS+ G    L+        + + 
Sbjct: 1   MAKLLITGGCGFLGSNLASFALSQGIDL--IVFD--NLSRKGATDNLHWLSSLGNFEFVH 56

Query: 59  ADL----LMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQ--ATLIDPCIKGTLNVLSSCK 112
            D+     +     +     D  FH A  V +    +I       +  + GTLN+L + +
Sbjct: 57  GDIRNKNDVTRLITK--YMPDSCFHLAGQVAM--TTSIDNPCMDFEINVGGTLNLLEAVR 112

Query: 113 KAKSVKRVVLTS 124
           +  S   ++ +S
Sbjct: 113 QYNSNCNIIYSS 124

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 Length = 660

 Score = 44.3 bits (105), Expect = 4e-05
 Identities = 48/271 (17%), Positives = 90/271 (33%), Gaps = 46/271 (16%)

Query: 1   MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKAD 60
                + G  GFI  HL + LL + H       D      +               ++ D
Sbjct: 315 RTRVLILGVNGFIGNHLTERLLREDH-YEVYGLDIGS-DAISRFLN----HPHFHFVEGD 368

Query: 61  LLMEGSFDEA-IQGVDGVFHTASPVL-VPYDNNIQATL-IDPCIKGTLNVLSSCKKAKSV 117
           + +   + E  ++  D V    +    + Y  N      +D   +  L ++  C K +  
Sbjct: 369 ISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELD--FEENLRIIRYCVKYR-- 424

Query: 118 KRVVLTSSCSSIRYRHDAQQ--------VSPLNESHWSDPDYCKHYNLWYAYAKTIAEKE 169
           KR++  S+        D           V P+N+  W            Y+ +K + ++ 
Sbjct: 425 KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWI-----------YSVSKQLLDRV 473

Query: 170 AWRIAKDCGIDMVVVNPSFVVGPLL----APQPTSTLLLILAMVKGLRGEYPNTTVG--- 222
            W   +  G+   +  P   +GP L    A +  S+  +   ++  + G  P   +    
Sbjct: 474 IWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGS-PIKLIDGGK 532

Query: 223 ----FVHIDDVVGA--HILAMEETRASGRLI 247
               F  I D + A   I+     R  G +I
Sbjct: 533 QKRCFTDIRDGIEALYRIIENAGNRCDGEII 563

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 42.0 bits (99), Expect = 1e-04
 Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 6/82 (7%)

Query: 1  MPEYCVTGGTGFIAAHLVKALLD---KGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIM 57
          M    +TG    +   LVKALL+       + TT R+ E   +   L +L      + I+
Sbjct: 21 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE---LEDLAKNHSNIHIL 77

Query: 58 KADLLMEGSFDEAIQGVDGVFH 79
          + DL    ++D+ +  ++GV  
Sbjct: 78 EIDLRNFDAYDKLVADIEGVTK 99

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} Length = 321

 Score = 42.2 bits (100), Expect = 1e-04
 Identities = 29/148 (19%), Positives = 56/148 (37%), Gaps = 30/148 (20%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMV-----RTTVRDPEDLSKVGFLWELNGAEERLKIMKAD 60
           +TG  GF+  +L   L ++   V         + P                  ++++  D
Sbjct: 17  ITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAKLP-----------------NVEMISLD 59

Query: 61  LLMEGSFDEAIQGV--DGVFHTA--SPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKS 116
           ++      + I  +  D +FH A  S V   + N       +  + GTL+VL + + +  
Sbjct: 60  IMDSQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTN--VFGTLHVLDAVRDSNL 117

Query: 117 VKRVVLTSSCSSIRYRHDAQQVSPLNES 144
             R++     SS  Y     + SP++E 
Sbjct: 118 DCRILTIG--SSEEYGMILPEESPVSEE 143

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} Length = 336

 Score = 42.1 bits (100), Expect = 1e-04
 Identities = 31/125 (24%), Positives = 50/125 (40%), Gaps = 22/125 (17%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRD-------PEDLSKVGFLWELNGAEERLKIMK 58
           VTGG GFI ++ ++ +L+K         D       P +L  +         + R   +K
Sbjct: 8   VTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDL-------EDDPRYTFVK 60

Query: 59  ADLLMEGSFDEAIQGVDGVFHTA--SPVLVPYDNNIQ--ATLIDPCIKGTLNVLSSCKKA 114
            D+       E ++ VDGV H A  S V    D +I      +   + GT  +L S ++ 
Sbjct: 61  GDVADYELVKELVRKVDGVVHLAAESHV----DRSISSPEIFLHSNVIGTYTLLESIRRE 116

Query: 115 KSVKR 119
               R
Sbjct: 117 NPEVR 121

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 40.0 bits (94), Expect = 4e-04
 Identities = 25/192 (13%), Positives = 51/192 (26%), Gaps = 49/192 (25%)

Query: 5   CVTGGTGFIAAHLVKALLDKGHMVRTTV--RDPEDLSKVGFLWELNGAEERLKIMKADLL 62
            + G TG    HL+  +L +  + +     R                   RL      L 
Sbjct: 9   LLAGATGLTGEHLLDRILSEPTLAKVIAPARKAL------------AEHPRLDNPVGPL- 55

Query: 63  MEGSFDEAIQGVDGVFHTASPVLVPYDNNIQA-TLIDPCIKGTLNVLSSCKKAKSVKRVV 121
                 +    +D  F       +    + +A   +D      L V     +    +  +
Sbjct: 56  -AELLPQLDGSIDTAFCCLG-TTIKEAGSEEAFRAVD--FDLPLAVGKRALEMG-ARHYL 110

Query: 122 LTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGID- 180
           + S+  +             +                  Y +   E E  +  ++ G   
Sbjct: 111 VVSALGA-------------DAKSSI------------FYNRVKGELE--QALQEQGWPQ 143

Query: 181 MVVVNPSFVVGP 192
           + +  PS + GP
Sbjct: 144 LTIARPSLLFGP 155

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* Length = 348

 Score = 39.8 bits (94), Expect = 6e-04
 Identities = 27/119 (22%), Positives = 47/119 (39%), Gaps = 23/119 (19%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRD-------PEDLSKVGFLWELNGAEERLKIMK 58
           VTGG GFI ++ V  + +    V  TV D         +L  +          +R++++ 
Sbjct: 9   VTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI--------LGDRVELVV 60

Query: 59  ADLLMEGSFDEAIQGVDGVFHTA--SPVLVPYDNNIQ--ATLIDPCIKGTLNVLSSCKK 113
            D+      D+     D + H A  S      DN++   +  I     GT  +L + +K
Sbjct: 61  GDIADAELVDKLAAKADAIVHYAAESHN----DNSLNDPSPFIHTNFIGTYTLLEAARK 115

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	305
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	100.0
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	100.0
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	100.0
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	100.0
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	100.0
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	100.0
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	100.0
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	100.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	100.0
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	100.0
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	100.0
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	100.0
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	100.0
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	100.0
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	100.0
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	100.0
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	100.0
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	100.0
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	100.0
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	100.0
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	100.0
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	100.0
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	100.0
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	100.0
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	100.0
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	100.0
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	100.0
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	100.0
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	100.0
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	100.0
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	100.0
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	100.0
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	100.0
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	100.0
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	100.0
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	100.0
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	100.0
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	100.0
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	100.0
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	100.0
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	100.0
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	100.0
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	100.0
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	100.0
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	100.0
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	100.0
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	100.0
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	100.0
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	100.0
4f6c_A	427	AUSA reductase domain protein; thioester reductase	100.0
4f6l_B	508	AUSA reductase domain protein; thioester reductase	100.0
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	100.0
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	100.0
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	100.0
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	100.0
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	100.0
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	100.0
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	100.0
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	100.0
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	100.0
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	100.0
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	100.0
1xq6_A	253	Unknown protein; structural genomics, protein stru	100.0
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.98
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.97
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.97
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.97
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.97
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.97
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.97
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.96
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.96
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.96
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.96
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.96
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.96
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.96
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.96
1spx_A	278	Short-chain reductase family member (5L265); paral	99.95
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.95
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.95
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.95
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.95
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.95
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.95
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.95
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.95
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.95
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.95
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.95
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.95
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.95
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.95
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.95
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.95
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.94
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.94
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.94
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.94
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.94
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.94
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.94
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.94
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.94
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.94
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.94
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.94
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.94
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.94
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.94
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.94
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.94
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.94
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.94
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.94
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.94
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.94
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.94
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.94
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.94
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.94
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.94
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.94
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.93
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.93
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.93
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.93
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.93
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.93
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.93
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.93
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.93
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.93
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.93
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.93
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.93
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.93
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.93
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.93
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.93
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.93
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.93
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.93
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.93
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.93
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.93
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.93
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.93
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.93
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.93
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.93
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.93
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.93
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.93
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.93
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.93
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.93
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.93
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.93
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.93
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.93
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.93
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.93
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.93
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.93
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.93
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.93
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.93
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.93
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.93
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.93
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.93
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.93
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.93
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.93
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.93
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.93
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.92
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.92
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.92
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.92
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.92
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.92
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.92
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.92
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.92
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.92
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.92
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.92
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.92
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.92
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.92
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.92
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.92
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.92
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.92
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.92
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.92
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.92
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.92
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.92
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.92
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.92
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.92
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.92
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.92
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.92
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.92
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.92
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.92
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.92
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.92
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.92
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.92
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.92
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.92
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.92
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.92
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.92
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.92
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.92
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.92
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.92
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.92
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.92
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.92
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.92
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.92
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.92
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.92
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.92
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.92
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.92
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.92
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.92
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.91
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.91
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.91
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.91
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.91
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.91
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.91
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.91
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.91
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.91
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.91
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.91
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.91
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.91
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.91
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.91
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.9
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.9
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.9
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.9
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.9
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.9
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.9
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.9
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.9
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.9
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.9
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.89
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.89
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.89
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.89
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.89
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.88
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.88
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.88
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.87
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.87
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.87
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.87
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.87
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.87
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.86
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.86
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.86
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.86
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.86
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.85
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.84
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.84
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.84
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.83
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.79
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.77
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.77
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.77
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.74
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.65
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.64
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.63
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.62
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.61
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.6
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.57
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.56
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.55
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.44
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.36
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.25
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	99.24
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	99.19
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.06
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	99.05
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	99.01
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	99.0
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.92
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.9
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.9
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.8
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.77
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	98.7
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.65
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.65
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.64
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.6
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.55
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.55
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	98.46
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.44
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.39
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.39
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	98.3
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	98.27
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.25
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	98.16
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	98.09
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	98.07
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	98.07
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	98.05
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.0
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.99
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.94
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	97.92
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.92
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.91
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	97.9
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.89
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	97.89
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	97.88
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.86
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	97.85
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.84
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	97.83
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	97.82
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.81
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	97.8
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.79
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.78
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.78
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.77
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	97.75
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.74
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	97.71
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	97.7
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.69
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	97.67
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.67
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.66
1lnq_A	336	MTHK channels, potassium channel related protein;	97.65
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	97.65
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	97.61
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.61
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	97.61
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	97.61
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.6
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	97.6
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.6
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.59
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	97.59
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	97.59
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.58
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.58
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.58
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.58
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	97.57
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	97.56
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.55
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	97.55
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.55
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	97.55
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.54
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.54
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.53
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.53
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.51
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	97.5
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	97.49
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.48
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	97.47
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	97.46
2d59_A	144	Hypothetical protein PH1109; COA binding, structur	97.46
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	97.46
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.45
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.44
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	97.44
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	97.44
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	97.42
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	97.42
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.41
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	97.38
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	97.36
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.35
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	97.35
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	97.35
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	97.33
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.33
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	97.32
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	97.32
1iuk_A	140	Hypothetical protein TT1466; structural genomics,	97.32
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	97.31
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	97.3
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.29
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	97.28
3vtf_A	444	UDP-glucose 6-dehydrogenase; two discrete alpha/be	97.27
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.27
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.27
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.25
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	97.25
4ffl_A	363	PYLC; amino acid, biosynthesis of pyrrolysine, iso	97.22
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	97.22
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.21
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.2
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.19
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	97.19
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	97.19
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.18
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.18
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.17
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	97.15
2duw_A	145	Putative COA-binding protein; ligand binding prote	97.14
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	97.11
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.1
2yv3_A	331	Aspartate-semialdehyde dehydrogenase; aspartate pa	97.1
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	97.09
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	97.07
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	97.06
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.06
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.06
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.05
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	97.05
3e5r_O	337	PP38, glyceraldehyde-3-phosphate dehydrogenase, cy	97.04
3pid_A	432	UDP-glucose 6-dehydrogenase; rossmann fold, oxidor	97.04
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	97.02
2q3e_A	467	UDP-glucose 6-dehydrogenase; hexamer, structural g	97.01
3qha_A	296	Putative oxidoreductase; seattle structural genomi	97.0
3cps_A	354	Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, g	96.99
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	96.99
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	96.99
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.99
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.99
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	96.97
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.97
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.96
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	96.96
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.95
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.93
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	96.93
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	96.93
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.92
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	96.91
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	96.91
4ezb_A	317	Uncharacterized conserved protein; structural geno	96.9
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	96.89
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.87
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	96.87
3hsk_A	381	Aspartate-semialdehyde dehydrogenase; candida albi	96.86
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.86
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.85
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	96.85
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.85
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	96.84
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.84
3uw3_A	377	Aspartate-semialdehyde dehydrogenase; structural g	96.84
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	96.84
2o3j_A	481	UDP-glucose 6-dehydrogenase; structural genomics,	96.83
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.83
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	96.83
3tz6_A	344	Aspartate-semialdehyde dehydrogenase; asadh, ASD,	96.83
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	96.82
1yb4_A	295	Tartronic semialdehyde reductase; structural genom	96.82
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	96.82
2cvz_A	289	Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase;	96.8
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	96.79

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=9.2e-47  Score=322.22  Aligned_cols=276  Identities=17%  Similarity=0.179  Sum_probs=230.1

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ||+||||||+||||++|++.|+++|++|++++|++....    +       .+++++.+|+. .+.+.++++++|+|||+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~-------~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~   69 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA----I-------NDYEYRVSDYT-LEDLINQLNDVDAVVHL   69 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC----------------CCEEEECCCC-HHHHHHHTTTCSEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc----C-------CceEEEEcccc-HHHHHHhhcCCCEEEEc
Confidence            478999999999999999999999999999999843211    1       16899999999 99999999999999999


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHH
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYA  160 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  160 (305)
                      |+.....    .+...+++|+.++.+++++|++. ++++|||+||.++|+....    .+++|+++..|.      +.|+
T Consensus        70 a~~~~~~----~~~~~~~~n~~~~~~ll~a~~~~-~~~r~v~~SS~~vyg~~~~----~~~~E~~~~~p~------~~Y~  134 (311)
T 3m2p_A           70 AATRGSQ----GKISEFHDNEILTQNLYDACYEN-NISNIVYASTISAYSDETS----LPWNEKELPLPD------LMYG  134 (311)
T ss_dssp             CCCCCSS----SCGGGTHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGCCCGGG----CSBCTTSCCCCS------SHHH
T ss_pred             cccCCCC----ChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEccHHHhCCCCC----CCCCCCCCCCCC------chhH
Confidence            9987643    55668899999999999999998 8999999999998876432    688999988886      8899


Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCC---CCCCccceeHHHHHHHHHHhh
Q 039049          161 YAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEY---PNTTVGFVHIDDVVGAHILAM  237 (305)
Q Consensus       161 ~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~v~D~a~~~~~~~  237 (305)
                      .+|+++|++++.++++++++++++||+++||+..... .....++..+..+.+...   ++..++|+|++|+|++++.++
T Consensus       135 ~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~  213 (311)
T 3m2p_A          135 VSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNN-YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYAL  213 (311)
T ss_dssp             HHHHHHHHHHHHHHHHSCCEEEEEEECEEECSCC--C-CHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHcCCCEEEEeeCceeCcCCCCC-CHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHH
Confidence            9999999999999988999999999999999986543 344556677777766543   344899999999999999999


Q ss_pred             cccccCceEEEe-cCCcCHHHHHHHHHHhCCCCCCCCCCCC-CCCCCCCcccchhHHHH-hCCCccc-cCCC
Q 039049          238 EETRASGRLICS-SSVAHWSPIIEMLKATYPSYPYESKCSK-QEGDNSPHSMDTSKLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       238 ~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-lg~~~~~-~l~e  305 (305)
                      +++..++.||++ ++.+|+.|+++.+.+.+|.......... .........+|++|+++ ||| +|+ +|+|
T Consensus       214 ~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~-~p~~~~~~  284 (311)
T 3m2p_A          214 KQEKVSGTFNIGSGDALTNYEVANTINNAFGNKDNLLVKNPNANEGIHSSYMDSSKAKELLDF-STDYNFAT  284 (311)
T ss_dssp             TCTTCCEEEEECCSCEECHHHHHHHHHHHTTCTTCEEECSSSBCCSCCCBCBCCHHHHHHSCC-CCSCCHHH
T ss_pred             hcCCCCCeEEeCCCCcccHHHHHHHHHHHhCCCCcceecCCCCCCCcCceecCHHHHHHHhCC-CcccCHHH
Confidence            988777889996 6789999999999999976432222222 44566788999999999 999 998 7753

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=4.3e-47  Score=329.62  Aligned_cols=293  Identities=20%  Similarity=0.191  Sum_probs=234.4

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccc-hhhhhhccC--ccCceEEEEccCCCcchHHHHhcCCCEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSK-VGFLWELNG--AEERLKIMKADLLMEGSFDEAIQGVDGV   77 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~d~V   77 (305)
                      ||+|||||||||||++|++.|+++|++|++++|+...... ...+.....  ...+++++++|+.|.+.+.++++++|+|
T Consensus        25 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V  104 (351)
T 3ruf_A           25 PKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVDHV  104 (351)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCSEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCCEE
Confidence            4789999999999999999999999999999998754321 111111100  0147999999999999999999999999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccch
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNL  157 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  157 (305)
                      ||+|+..........+...+++|+.++.+++++|++. ++++|||+||.++|+....    .+++|+++..|.      +
T Consensus       105 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~v~~SS~~vyg~~~~----~~~~E~~~~~p~------~  173 (351)
T 3ruf_A          105 LHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNA-QVQSFTYAASSSTYGDHPA----LPKVEENIGNPL------S  173 (351)
T ss_dssp             EECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGGTTCCC----SSBCTTCCCCCC------S
T ss_pred             EECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEecHHhcCCCCC----CCCccCCCCCCC------C
Confidence            9999976543334456678999999999999999999 8999999999998876543    688999988777      8


Q ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCC---CchHHHHHHHHhcCCCCC-C--CCCccceeHHHHHH
Q 039049          158 WYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQP---TSTLLLILAMVKGLRGEY-P--NTTVGFVHIDDVVG  231 (305)
Q Consensus       158 ~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~-~--~~~~~~i~v~D~a~  231 (305)
                      .|+.+|.++|.+++.++++++++++++||+++|||+.....   .....++..+..+.+... +  +..++|+|++|+|+
T Consensus       174 ~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~  253 (351)
T 3ruf_A          174 PYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQ  253 (351)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHH
Confidence            89999999999999999889999999999999999865432   234556677777766543 3  34899999999999


Q ss_pred             HHHHhhcc--cccCceEEEe-cCCcCHHHHHHHHHHhCCCCCCCC-----CCCCCCCCCCCcccchhHHHH-hCCCccc-
Q 039049          232 AHILAMEE--TRASGRLICS-SSVAHWSPIIEMLKATYPSYPYES-----KCSKQEGDNSPHSMDTSKLFE-LGFVGFK-  301 (305)
Q Consensus       232 ~~~~~~~~--~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-lg~~~~~-  301 (305)
                      +++.++++  ...++.||++ ++.+|+.|+++.+.+.+|..+...     .............+|++|+++ ||| +|+ 
T Consensus       254 a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~-~p~~  332 (351)
T 3ruf_A          254 MNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKYREFRSGDVRHSQADVTKAIDLLKY-RPNI  332 (351)
T ss_dssp             HHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHTTCCC-----EEECCCTTCCSBCCBCCHHHHHHHCC-CCCC
T ss_pred             HHHHHHhhccccCCCEEEeCCCCcccHHHHHHHHHHHhCcccccccccccccCCCCCccceeeeCHHHHHHHhCC-CCCC
Confidence            99999987  3346789995 679999999999999997622111     112234556678999999999 999 998 


Q ss_pred             cCCC
Q 039049          302 SVPQ  305 (305)
Q Consensus       302 ~l~e  305 (305)
                      +|+|
T Consensus       333 ~~~~  336 (351)
T 3ruf_A          333 KIRE  336 (351)
T ss_dssp             CHHH
T ss_pred             CHHH
Confidence            7653

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=1.2e-46  Score=326.13  Aligned_cols=291  Identities=15%  Similarity=0.149  Sum_probs=229.4

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcC--CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcC--CCE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKG--HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQG--VDG   76 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~   76 (305)
                      ||+|||||||||||++|++.|+++|  ++|++++|...... ...+... ...++++++++|+.|.+.+.+++++  +|+
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~-~~~l~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~  101 (346)
T 4egb_A           24 AMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN-LNNVKSI-QDHPNYYFVKGEIQNGELLEHVIKERDVQV  101 (346)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC-GGGGTTT-TTCTTEEEEECCTTCHHHHHHHHHHHTCCE
T ss_pred             CCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc-hhhhhhh-ccCCCeEEEEcCCCCHHHHHHHHhhcCCCE
Confidence            4789999999999999999999999  67777777653221 1112111 1134899999999999999999986  999


Q ss_pred             EEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccc
Q 039049           77 VFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYN  156 (305)
Q Consensus        77 Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  156 (305)
                      |||+|+........+.+...+++|+.++.+++++|++. ++++|||+||.++|+....   ..+++|+++..|.      
T Consensus       102 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~v~~SS~~vy~~~~~---~~~~~E~~~~~p~------  171 (346)
T 4egb_A          102 IVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKY-PHIKLVQVSTDEVYGSLGK---TGRFTEETPLAPN------  171 (346)
T ss_dssp             EEECCCCC---------CHHHHHHTHHHHHHHHHHHHS-TTSEEEEEEEGGGGCCCCS---SCCBCTTSCCCCC------
T ss_pred             EEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEeCchHHhCCCCc---CCCcCCCCCCCCC------
Confidence            99999988765555677779999999999999999999 8999999999999887543   3689999988877      


Q ss_pred             hhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCC-C--CCCccceeHHHHHHHH
Q 039049          157 LWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEY-P--NTTVGFVHIDDVVGAH  233 (305)
Q Consensus       157 ~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~i~v~D~a~~~  233 (305)
                      +.|+.+|.++|.+++.++++++++++++||+++|||+.... .....++..+..+.+... +  ...++|+|++|+|+++
T Consensus       172 ~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  250 (346)
T 4egb_A          172 SPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPE-KLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAI  250 (346)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCcc-chHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHH
Confidence            88999999999999999988999999999999999986543 344556777777776543 3  3489999999999999


Q ss_pred             HHhhcccccCceEEEe-cCCcCHHHHHHHHHHhCCCCCC-CCCCCCCCCCCCCcccchhHHHH-hCCCccc-cCCC
Q 039049          234 ILAMEETRASGRLICS-SSVAHWSPIIEMLKATYPSYPY-ESKCSKQEGDNSPHSMDTSKLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       234 ~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-lg~~~~~-~l~e  305 (305)
                      +.+++++..++.||++ ++.+|+.|+++.+.+.+|.... .............+.+|++|+++ ||| +|+ +|+|
T Consensus       251 ~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~-~p~~~~~e  325 (346)
T 4egb_A          251 DVVLHKGRVGEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYVTDRLGHDRRYAINAEKMKNEFDW-EPKYTFEQ  325 (346)
T ss_dssp             HHHHHHCCTTCEEEECCSCCEEHHHHHHHHHHHHTCCGGGCEEECC--CCCSCCCBCCHHHHHHHCC-CCCCCHHH
T ss_pred             HHHHhcCCCCCEEEECCCCceeHHHHHHHHHHHhCCCcccccccCCCCCCcceeeccHHHHHHHcCC-CCCCCHHH
Confidence            9999988877799996 5679999999999999976321 22222344455677899999999 999 998 7753

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=1.6e-45  Score=314.80  Aligned_cols=281  Identities=19%  Similarity=0.221  Sum_probs=218.7

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ||+||||||+||||++|++.|+++| .++++.+........        ...+++++.+|+.| +.+.++++++|+|||+
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~--------~~~~~~~~~~Dl~~-~~~~~~~~~~d~vih~   70 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEF--------VNEAARLVKADLAA-DDIKDYLKGAEEVWHI   70 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGG--------SCTTEEEECCCTTT-SCCHHHHTTCSEEEEC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhh--------cCCCcEEEECcCCh-HHHHHHhcCCCEEEEC
Confidence            8999999999999999999999999 555555543321111        12368999999999 8999999999999999


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHH
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYA  160 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  160 (305)
                      |+......+.+.+...+++|+.++.++++++++. ++++|||+||.++|+...    ..+++|+.+..|.      +.|+
T Consensus        71 a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~iv~~SS~~vyg~~~----~~~~~E~~~~~~~------~~Y~  139 (313)
T 3ehe_A           71 AANPDVRIGAENPDEIYRNNVLATYRLLEAMRKA-GVSRIVFTSTSTVYGEAK----VIPTPEDYPTHPI------SLYG  139 (313)
T ss_dssp             CCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGGCSCS----SSSBCTTSCCCCC------SHHH
T ss_pred             CCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeCchHHhCcCC----CCCCCCCCCCCCC------CHHH
Confidence            9976655456677889999999999999999998 889999999999887643    2688898887776      8899


Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcC-CC-CCCC--CCccceeHHHHHHHHHHh
Q 039049          161 YAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGL-RG-EYPN--TTVGFVHIDDVVGAHILA  236 (305)
Q Consensus       161 ~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~-~~-~~~~--~~~~~i~v~D~a~~~~~~  236 (305)
                      .+|.++|.+++.++.+++++++++||+++|||+...  .....++.....+. +. .+++  ..++|+|++|+|++++.+
T Consensus       140 ~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~  217 (313)
T 3ehe_A          140 ASKLACEALIESYCHTFDMQAWIYRFANVIGRRSTH--GVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFG  217 (313)
T ss_dssp             HHHHHHHHHHHHHHHHTTCEEEEEECSCEESTTCCC--SHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCEEEEeeccccCcCCCc--ChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHH
Confidence            999999999999999999999999999999997653  33445666666653 22 2343  489999999999999999


Q ss_pred             hcccccCceEEEe-cCCcCHHHHHHHHHHhCCCCCCCCCCC---CCCCCCCCcccchhHHHHhCCCccc-cCCC
Q 039049          237 MEETRASGRLICS-SSVAHWSPIIEMLKATYPSYPYESKCS---KQEGDNSPHSMDTSKLFELGFVGFK-SVPQ  305 (305)
Q Consensus       237 ~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~lg~~~~~-~l~e  305 (305)
                      ++....++.||++ ++.+|+.|+++.+.+.+|..+......   ..........+|++|+++||| +|+ +|+|
T Consensus       218 ~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~-~p~~~~~e  290 (313)
T 3ehe_A          218 LRGDERVNIFNIGSEDQIKVKRIAEIVCEELGLSPRFRFTGGDRGWKGDVPVMLLSIEKLKRLGW-KPRYNSEE  290 (313)
T ss_dssp             TTCCSSEEEEECCCSCCEEHHHHHHHHHHHTTCCCEEEEC------------CCBCCHHHHHHTC-CCSCCHHH
T ss_pred             hccCCCCceEEECCCCCeeHHHHHHHHHHHhCCCCceEECCCccCCccccceeccCHHHHHHcCC-CCCCCHHH
Confidence            9966667789996 679999999999999997532111111   123344567899999966999 998 7753

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=2e-45  Score=314.12  Aligned_cols=280  Identities=21%  Similarity=0.221  Sum_probs=223.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      |+||||||+||||++|++.|+++|++|++++|+........        ..+++++.+|+.|.+ +.+++++ |+|||+|
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A   70 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV--------NPSAELHVRDLKDYS-WGAGIKG-DVVFHFA   70 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS--------CTTSEEECCCTTSTT-TTTTCCC-SEEEECC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc--------CCCceEEECccccHH-HHhhcCC-CEEEECC
Confidence            67999999999999999999999999999999876433211        237899999999988 8888887 9999999


Q ss_pred             cccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHHH
Q 039049           82 SPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAY  161 (305)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~  161 (305)
                      +........+.+...+++|+.++.+++++|++. ++++|||+||.++|+....    .+++|+++..|.      +.|+.
T Consensus        71 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~vyg~~~~----~~~~e~~~~~p~------~~Y~~  139 (312)
T 3ko8_A           71 ANPEVRLSTTEPIVHFNENVVATFNVLEWARQT-GVRTVVFASSSTVYGDADV----IPTPEEEPYKPI------SVYGA  139 (312)
T ss_dssp             SSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCSCSS----SSBCTTSCCCCC------SHHHH
T ss_pred             CCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeCcHHHhCCCCC----CCCCCCCCCCCC------ChHHH
Confidence            976554455667778999999999999999998 8999999999999876532    688999887776      88999


Q ss_pred             HHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCC-C-CCCC--CCccceeHHHHHHHHHHhh
Q 039049          162 AKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLR-G-EYPN--TTVGFVHIDDVVGAHILAM  237 (305)
Q Consensus       162 sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~-~-~~~~--~~~~~i~v~D~a~~~~~~~  237 (305)
                      +|.++|.+++.++.+++++++++||+++|||+...  .....++..+..+.. . .+++  ..++|+|++|+|++++.++
T Consensus       140 sK~~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~  217 (312)
T 3ko8_A          140 AKAAGEVMCATYARLFGVRCLAVRYANVVGPRLRH--GVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAW  217 (312)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCS--SHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEeeccccCcCCCC--ChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHH
Confidence            99999999999998899999999999999998543  334455666665532 2 2333  4899999999999999999


Q ss_pred             cc----cccCceEEEe-cCCcCHHHHHHHHHHhCCCCCCCCCC------CCCCCCCCCcccchhHHHH-hCCCccc-cCC
Q 039049          238 EE----TRASGRLICS-SSVAHWSPIIEMLKATYPSYPYESKC------SKQEGDNSPHSMDTSKLFE-LGFVGFK-SVP  304 (305)
Q Consensus       238 ~~----~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~-lg~~~~~-~l~  304 (305)
                      ++    ...++.||++ ++.+|+.|+++.+.+.+|..+.....      ...........+|++|+++ ||| +|+ +++
T Consensus       218 ~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~-~p~~~~~  296 (312)
T 3ko8_A          218 KKFEEMDAPFLALNVGNVDAVRVLDIAQIVAEVLGLRPEIRLVPSTPDGRGWPGDVKYMTLAVTKLMKLTGW-RPTMTSA  296 (312)
T ss_dssp             HHHHHSCCSEEEEEESCSSCEEHHHHHHHHHHHHTCCCEEEEC----------CCCSEECBCCHHHHHHHCC-CCSSCHH
T ss_pred             HhccccCCCCcEEEEcCCCceeHHHHHHHHHHHhCCCCceeecCccccccCCCCCccccccCHHHHHHHhCC-CCCCCHH
Confidence            88    3345679996 67899999999999998753211110      0123445567899999988 999 998 765


Q ss_pred             C
Q 039049          305 Q  305 (305)
Q Consensus       305 e  305 (305)
                      |
T Consensus       297 ~  297 (312)
T 3ko8_A          297 E  297 (312)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=1.3e-44  Score=312.74  Aligned_cols=290  Identities=16%  Similarity=0.165  Sum_probs=226.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccch-hhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKV-GFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi   78 (305)
                      |+||||||+||||+++++.|+++|++|++++|+....... ..+....  ..+++++++|+.|.+.+.++++  ++|+||
T Consensus         6 ~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   83 (341)
T 3enk_A            6 GTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKIT--GKTPAFHETDVSDERALARIFDAHPITAAI   83 (341)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHH--SCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred             cEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhc--CCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence            6899999999999999999999999999999987654322 1111111  2378899999999999999998  899999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchh
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLW  158 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  158 (305)
                      |+|+........+.+...++.|+.++.++++++++. ++++|||+||.++|+...    ..+++|+.+..|.      +.
T Consensus        84 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~~g~~~----~~~~~e~~~~~~~------~~  152 (341)
T 3enk_A           84 HFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRER-AVKRIVFSSSATVYGVPE----RSPIDETFPLSAT------NP  152 (341)
T ss_dssp             ECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGBCSCS----SSSBCTTSCCBCS------SH
T ss_pred             ECccccccCccccChHHHHHHHHHHHHHHHHHHHhC-CCCEEEEEecceEecCCC----CCCCCCCCCCCCC------Ch
Confidence            999987543334455678899999999999999998 889999999999886543    2678998887766      88


Q ss_pred             HHHHHHHHHHHHHHHHHHcC-CcEEEEecCceecCCCCC------C--CCchHHHHHHHHhcCCCC-----------CCC
Q 039049          159 YAYAKTIAEKEAWRIAKDCG-IDMVVVNPSFVVGPLLAP------Q--PTSTLLLILAMVKGLRGE-----------YPN  218 (305)
Q Consensus       159 Y~~sK~~~E~~~~~~~~~~~-~~~~i~Rp~~v~G~~~~~------~--~~~~~~~~~~~~~~~~~~-----------~~~  218 (305)
                      |+.+|.++|.+++.++.+++ ++++++||+++|||....      .  ......++.....+....           .++
T Consensus       153 Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~  232 (341)
T 3enk_A          153 YGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGT  232 (341)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSS
T ss_pred             hHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCC
Confidence            99999999999999988875 999999999999996421      1  122333444444443211           233


Q ss_pred             CCccceeHHHHHHHHHHhhccc---ccCceEEEe-cCCcCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCcccchhHHHH
Q 039049          219 TTVGFVHIDDVVGAHILAMEET---RASGRLICS-SSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFE  294 (305)
Q Consensus       219 ~~~~~i~v~D~a~~~~~~~~~~---~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (305)
                      ..++|+|++|+|++++.++++.   ..++.||++ ++.+|+.|+++.+.+.+|..........+........+|++|+++
T Consensus       233 ~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~  312 (341)
T 3enk_A          233 GVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAVPYELVARRPGDVAECYANPAAAAE  312 (341)
T ss_dssp             CEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCCCEEEECCCTTCCSEECBCCHHHHH
T ss_pred             eeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCCcceeeCCCCCCCccccccCHHHHHH
Confidence            4899999999999999999873   446789995 678999999999999997532222223345566678899999999


Q ss_pred             -hCCCccc-cCCC
Q 039049          295 -LGFVGFK-SVPQ  305 (305)
Q Consensus       295 -lg~~~~~-~l~e  305 (305)
                       ||| +|+ +|+|
T Consensus       313 ~lG~-~p~~~l~~  324 (341)
T 3enk_A          313 TIGW-KAERDLER  324 (341)
T ss_dssp             HHCC-CCCCCHHH
T ss_pred             HcCC-CCCCCHHH
Confidence             999 996 7653

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=1.9e-44  Score=313.07  Aligned_cols=293  Identities=22%  Similarity=0.186  Sum_probs=228.0

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCccc-chhhhhhccC--ccCceEEEEccCCCcchHHHHhcCCCEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLS-KVGFLWELNG--AEERLKIMKADLLMEGSFDEAIQGVDGV   77 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~d~V   77 (305)
                      ||+||||||+||||++|++.|++.|++|++++|+..... ....+.....  ...+++++.+|+.|.+.+.++++++|+|
T Consensus        27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v  106 (352)
T 1sb8_A           27 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDYV  106 (352)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCCEE
Confidence            689999999999999999999999999999999764321 1111111000  0247899999999999999999999999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccch
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNL  157 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  157 (305)
                      ||+|+........+.+...+++|+.++.+++++|++. ++++|||+||.++|+....    .+++|+++..|.      +
T Consensus       107 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~----~~~~E~~~~~~~------~  175 (352)
T 1sb8_A          107 LHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-KVQSFTYAASSSTYGDHPG----LPKVEDTIGKPL------S  175 (352)
T ss_dssp             EECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGGTTCCC----SSBCTTCCCCCC------S
T ss_pred             EECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHhcCCCCC----CCCCCCCCCCCC------C
Confidence            9999976432223456678899999999999999998 8999999999998876432    578899887776      8


Q ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCC---CchHHHHHHHHhcCCCC-CC--CCCccceeHHHHHH
Q 039049          158 WYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQP---TSTLLLILAMVKGLRGE-YP--NTTVGFVHIDDVVG  231 (305)
Q Consensus       158 ~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~-~~--~~~~~~i~v~D~a~  231 (305)
                      .|+.+|.++|.+++.++++++++++++||+++|||......   .....++..+..+.+.. .+  +..++|+|++|+|+
T Consensus       176 ~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~  255 (352)
T 1sb8_A          176 PYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQ  255 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHH
Confidence            89999999999999998888999999999999999865431   22344566666676543 23  34789999999999


Q ss_pred             HHHHhhccc--ccCceEEEe-cCCcCHHHHHHHHHHhC---CCCCC--CCCCCCCCCCCCCcccchhHHHH-hCCCccc-
Q 039049          232 AHILAMEET--RASGRLICS-SSVAHWSPIIEMLKATY---PSYPY--ESKCSKQEGDNSPHSMDTSKLFE-LGFVGFK-  301 (305)
Q Consensus       232 ~~~~~~~~~--~~~~~~~~~-~~~~s~~el~~~i~~~~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-lg~~~~~-  301 (305)
                      +++.+++..  ..++.||++ ++.+|+.|+++.+.+.+   |....  +.....+........+|++|+++ ||| +|+ 
T Consensus       256 a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~-~p~~  334 (352)
T 1sb8_A          256 ANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAAKLLGY-APKY  334 (352)
T ss_dssp             HHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEECCCTTCCSBCCBCCHHHHHHTCC-CCCC
T ss_pred             HHHHHHhccccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCCCCceecCCCccchhhccCCHHHHHHHhCC-CCCC
Confidence            999998862  346789995 67899999999999998   64321  21112233345567899999999 999 987 


Q ss_pred             cCCC
Q 039049          302 SVPQ  305 (305)
Q Consensus       302 ~l~e  305 (305)
                      +|+|
T Consensus       335 ~~~e  338 (352)
T 1sb8_A          335 DVSA  338 (352)
T ss_dssp             CHHH
T ss_pred             CHHH
Confidence            7653

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=100.00  E-value=2.1e-44  Score=310.05  Aligned_cols=283  Identities=19%  Similarity=0.259  Sum_probs=219.3

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVF   78 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi   78 (305)
                      ||+||||||+||||++|+++|++.|++|++++|+......  .   .   ..+++++.+|+.|.+.+.++++  ++|+||
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~---~---~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi   72 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHED--A---I---TEGAKFYNGDLRDKAFLRDVFTQENIEAVM   72 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG--G---S---CTTSEEEECCTTCHHHHHHHHHHSCEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchh--h---c---CCCcEEEECCCCCHHHHHHHHhhcCCCEEE
Confidence            8999999999999999999999999999999997653221  1   1   1268899999999999999998  899999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchh
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLW  158 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  158 (305)
                      |+|+......+.+.+...+++|+.++.+++++|++. ++++|||+||.++|+...    ..+++|+++..|.      +.
T Consensus        73 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~~~~~----~~~~~E~~~~~~~------~~  141 (330)
T 2c20_A           73 HFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEF-KVDKFIFSSTAATYGEVD----VDLITEETMTNPT------NT  141 (330)
T ss_dssp             ECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGGGCSCS----SSSBCTTSCCCCS------SH
T ss_pred             ECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHc-CCCEEEEeCCceeeCCCC----CCCCCcCCCCCCC------Ch
Confidence            999986532223456678999999999999999998 889999999999887542    2688999887766      88


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCC-------CCchHHHHHHHHhcC-C-CC---------CCCCC
Q 039049          159 YAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQ-------PTSTLLLILAMVKGL-R-GE---------YPNTT  220 (305)
Q Consensus       159 Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~-------~~~~~~~~~~~~~~~-~-~~---------~~~~~  220 (305)
                      |+.+|.++|.+++.++++++++++++||+++||++....       .......+.....+. + +.         .++..
T Consensus       142 Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~  221 (330)
T 2c20_A          142 YGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCI  221 (330)
T ss_dssp             HHHHHHHHHHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCE
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCcee
Confidence            999999999999999888899999999999999963211       122222333333322 1 11         12347


Q ss_pred             ccceeHHHHHHHHHHhhccccc---CceEEEe-cCCcCHHHHHHHHHHhCCCCCCCCC-CCCCCCCCCCcccchhHHHH-
Q 039049          221 VGFVHIDDVVGAHILAMEETRA---SGRLICS-SSVAHWSPIIEMLKATYPSYPYESK-CSKQEGDNSPHSMDTSKLFE-  294 (305)
Q Consensus       221 ~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-  294 (305)
                      ++|+|++|+|++++.+++++..   ++.||++ ++.+|+.|+++.+.+.+|.. .+.. ............+|++|+++ 
T Consensus       222 ~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~d~~k~~~~  300 (330)
T 2c20_A          222 RDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHE-IPAEVAPRRAGDPARLVASSQKAKEK  300 (330)
T ss_dssp             ECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSC-CCEEEECCCSSCCSEECBCCHHHHHH
T ss_pred             EeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCC-CceeeCCCCCCcccccccCHHHHHHH
Confidence            8999999999999999987543   5689996 67899999999999999753 2211 12233344567899999999 


Q ss_pred             hCCCccc--cCC
Q 039049          295 LGFVGFK--SVP  304 (305)
Q Consensus       295 lg~~~~~--~l~  304 (305)
                      ||| +|+  +|+
T Consensus       301 lG~-~p~~~~l~  311 (330)
T 2c20_A          301 LGW-DPRYVNVK  311 (330)
T ss_dssp             HCC-CCSCCCHH
T ss_pred             hCC-CCccCCHH
Confidence            999 886  554

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=100.00  E-value=3.7e-44  Score=309.49  Aligned_cols=300  Identities=38%  Similarity=0.671  Sum_probs=216.8

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ||+||||||+||||++|+++|+++|++|++++|+.....+...+........+++++++|+.|.+.+.++++++|+|||+
T Consensus         5 ~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   84 (337)
T 2c29_D            5 SETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFHV   84 (337)
T ss_dssp             -CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEEEC
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEEEe
Confidence            47899999999999999999999999999999987643222222111111236889999999999999999999999999


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCC-ccEEEEeccceeeeccCCCCCCcccCCCCCCCcccc---cccc
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKS-VKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYC---KHYN  156 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~---~~~~  156 (305)
                      |+..... ..++....+++|+.++.+++++|.+. + +++|||+||.+++++....  ..+++|+++......   ..+.
T Consensus        85 A~~~~~~-~~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~riV~~SS~~~~~~~~~~--~~~~~E~~~~~~~~~~~~~~~~  160 (337)
T 2c29_D           85 ATPMDFE-SKDPENEVIKPTIEGMLGIMKSCAAA-KTVRRLVFTSSAGTVNIQEHQ--LPVYDESCWSDMEFCRAKKMTA  160 (337)
T ss_dssp             CCCCCSS-CSSHHHHTHHHHHHHHHHHHHHHHHH-SCCCEEEEECCGGGTSCSSSC--CSEECTTCCCCHHHHHHHCCTT
T ss_pred             ccccCCC-CCChHHHHHHHHHHHHHHHHHHHHhC-CCccEEEEeeeHhhcccCCCC--CcccCcccCCchhhhcccCCcc
Confidence            9876321 23444568899999999999999988 6 8999999998865543221  245777765432210   0112


Q ss_pred             hhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCC-CCccceeHHHHHHHHHH
Q 039049          157 LWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPN-TTVGFVHIDDVVGAHIL  235 (305)
Q Consensus       157 ~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a~~~~~  235 (305)
                      ..|+.||.++|.+++.+.++++++++++||+++|||..................+....++. ....|+|++|+|++++.
T Consensus       161 ~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~v~Dva~a~~~  240 (337)
T 2c29_D          161 WMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHIY  240 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHHTEEEEEEHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCccccccCCCCEEEHHHHHHHHHH
Confidence            56999999999999988877899999999999999986543222111111112332221111 13459999999999999


Q ss_pred             hhcccccCceEEEecCCcCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCcccchhHHHHhCCCccc-cCCC
Q 039049          236 AMEETRASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELGFVGFK-SVPQ  305 (305)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~-~l~e  305 (305)
                      +++++...+.|++++..+|+.|+++.+.+.++..+++..............+|++|++.||| +|+ +|+|
T Consensus       241 ~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~-~p~~~l~e  310 (337)
T 2c29_D          241 LFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNIPTEFKGVDENLKSVCFSSKKLTDLGF-EFKYSLED  310 (337)
T ss_dssp             HHHCTTCCEEEEECCEEEEHHHHHHHHHHHCTTSCCCSCCTTCCTTCCCCEECCHHHHHHTC-CCCCCHHH
T ss_pred             HhcCcccCceEEEeCCCCCHHHHHHHHHHHCCCccCCCCCCcccCCCccccccHHHHHHcCC-CcCCCHHH
Confidence            99876666778887777999999999999886544443322223344567899999944999 997 7653

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=2e-45  Score=321.54  Aligned_cols=290  Identities=14%  Similarity=0.180  Sum_probs=224.8

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHc-CCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCC-CcchHHHHhcCCCEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDK-GHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLL-MEGSFDEAIQGVDGVF   78 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-d~~~~~~~~~~~d~Vi   78 (305)
                      ||+|||||||||||++|++.|+++ |++|++++|+.........       ..+++++.+|+. |.+.+.++++++|+||
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-------~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vi   96 (372)
T 3slg_A           24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK-------HERMHFFEGDITINKEWVEYHVKKCDVIL   96 (372)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG-------STTEEEEECCTTTCHHHHHHHHHHCSEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc-------CCCeEEEeCccCCCHHHHHHHhccCCEEE
Confidence            579999999999999999999998 9999999998764332211       248999999999 9999999999999999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCccccc-ccch
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCK-HYNL  157 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~-~~~~  157 (305)
                      |+|+......+...+...+++|+.++.+++++|++. + ++|||+||.++|+....    .+++|++++.+..+. .+.+
T Consensus        97 h~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~-~~~v~~SS~~vyg~~~~----~~~~e~~~~~~~~p~~~p~~  170 (372)
T 3slg_A           97 PLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFPSTSEVYGMCAD----EQFDPDASALTYGPINKPRW  170 (372)
T ss_dssp             ECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHH-T-CEEEEECCGGGGBSCCC----SSBCTTTCCEEECCTTCTTH
T ss_pred             EcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHh-C-CcEEEeCcHHHhCCCCC----CCCCccccccccCCCCCCCC
Confidence            999987654334456678899999999999999999 7 99999999998876432    577787765221111 1127


Q ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCC-------CCchHHHHHHHHhcCCCCC---CCCCccceeHH
Q 039049          158 WYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQ-------PTSTLLLILAMVKGLRGEY---PNTTVGFVHID  227 (305)
Q Consensus       158 ~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~---~~~~~~~i~v~  227 (305)
                      .|+.+|+++|.+++.++++ +++++++||+++|||+....       ......++..+..+.+..+   ++..++|+|++
T Consensus       171 ~Y~~sK~~~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~  249 (372)
T 3slg_A          171 IYACSKQLMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVD  249 (372)
T ss_dssp             HHHHHHHHHHHHHHHHHTT-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHH
T ss_pred             cHHHHHHHHHHHHHHHHHC-CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHH
Confidence            8999999999999999877 99999999999999986531       1133456677777766543   34489999999


Q ss_pred             HHHHHHHHhhcccc---cCceEEEec--CCcCHHHHHHHHHHhCCCCCCCCC-C--------------CCCCCCCCCccc
Q 039049          228 DVVGAHILAMEETR---ASGRLICSS--SVAHWSPIIEMLKATYPSYPYESK-C--------------SKQEGDNSPHSM  287 (305)
Q Consensus       228 D~a~~~~~~~~~~~---~~~~~~~~~--~~~s~~el~~~i~~~~~~~~~~~~-~--------------~~~~~~~~~~~~  287 (305)
                      |+|++++.+++++.   .++.||+++  +.+|+.|+++.+.+.+|....... +              ...........+
T Consensus       250 Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (372)
T 3slg_A          250 DGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAKRVKLVETTSGAYYGNGYQDVQNRVP  329 (372)
T ss_dssp             HHHHHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTTHHHHHTCCEEEC-------------CCCCB
T ss_pred             HHHHHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCcccccccccceeeeccccccccCCccccceeec
Confidence            99999999999874   567899965  589999999999999864211000 0              001134556788


Q ss_pred             chhHHHH-hCCCccc-cCCC
Q 039049          288 DTSKLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       288 ~~~~~~~-lg~~~~~-~l~e  305 (305)
                      |++|+++ ||| +|+ +|+|
T Consensus       330 d~~k~~~~lG~-~p~~~l~e  348 (372)
T 3slg_A          330 KIENTMQELGW-APQFTFDD  348 (372)
T ss_dssp             CCHHHHHHHTC-CCCCCHHH
T ss_pred             CHHHHHHHcCC-CCCCCHHH
Confidence            9999999 999 998 7753

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=1.2e-44  Score=313.67  Aligned_cols=276  Identities=20%  Similarity=0.228  Sum_probs=222.8

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      +|+||||||+||||++|++.|+++|++|++++|++..              .+++++.+|+.|.+.+.++++++|+|||+
T Consensus        19 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~--------------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   84 (347)
T 4id9_A           19 SHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG--------------TGGEEVVGSLEDGQALSDAIMGVSAVLHL   84 (347)
T ss_dssp             --CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS--------------SCCSEEESCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC--------------CCccEEecCcCCHHHHHHHHhCCCEEEEC
Confidence            4789999999999999999999999999999998753              26789999999999999999999999999


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHH
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYA  160 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  160 (305)
                      |+.....  .......+++|+.++.+++++|++. ++++|||+||.++|+.....  ..+++|+++..|.      +.|+
T Consensus        85 A~~~~~~--~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~V~~SS~~vyg~~~~~--~~~~~E~~~~~~~------~~Y~  153 (347)
T 4id9_A           85 GAFMSWA--PADRDRMFAVNVEGTRRLLDAASAA-GVRRFVFASSGEVYPENRPE--FLPVTEDHPLCPN------SPYG  153 (347)
T ss_dssp             CCCCCSS--GGGHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGTTTTSCS--SSSBCTTSCCCCC------SHHH
T ss_pred             CcccCcc--hhhHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEECCHHHhCCCCCC--CCCcCCCCCCCCC------ChHH
Confidence            9987643  2334778999999999999999998 89999999999998763211  3689999988776      8899


Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEEEecCcee-------------cCCCCCC----------CCchHHHHHHHHhcCCCC-C
Q 039049          161 YAKTIAEKEAWRIAKDCGIDMVVVNPSFVV-------------GPLLAPQ----------PTSTLLLILAMVKGLRGE-Y  216 (305)
Q Consensus       161 ~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~-------------G~~~~~~----------~~~~~~~~~~~~~~~~~~-~  216 (305)
                      .+|.++|.+++.++++++++++++||+++|             ||+....          ......++.....+.+.. +
T Consensus       154 ~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (347)
T 4id9_A          154 LTKLLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHIL  233 (347)
T ss_dssp             HHHHHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEE
T ss_pred             HHHHHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEe
Confidence            999999999999998999999999999999             7753321          122334455555555533 2


Q ss_pred             --CCCCccc----eeHHHHHHHHHHhhccc-ccCceEEEe-cCCcCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCcccc
Q 039049          217 --PNTTVGF----VHIDDVVGAHILAMEET-RASGRLICS-SSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMD  288 (305)
Q Consensus       217 --~~~~~~~----i~v~D~a~~~~~~~~~~-~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (305)
                        +...++|    +|++|+|++++.+++++ ..++.||++ ++.+|+.|+++.+.+.+|.......   .+.......+|
T Consensus       234 g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~---~p~~~~~~~~d  310 (347)
T 4id9_A          234 ARNENGRPFRMHITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGLPIVTVD---FPGDGVYYHTS  310 (347)
T ss_dssp             EECTTCCBCEECEEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCCEEEEE---CSSCCCBCCBC
T ss_pred             CCCCcccCCccCcEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCCCCceee---CCCcccccccC
Confidence              3447899    99999999999999987 456789996 6789999999999999975311111   11222377899


Q ss_pred             hhHHHH-hCCCccc-cCCC
Q 039049          289 TSKLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       289 ~~~~~~-lg~~~~~-~l~e  305 (305)
                      ++|+++ ||| +|+ +|+|
T Consensus       311 ~~k~~~~lG~-~p~~~~~~  328 (347)
T 4id9_A          311 NERIRNTLGF-EAEWTMDR  328 (347)
T ss_dssp             CHHHHHHHCC-CCCCCHHH
T ss_pred             HHHHHHHhCC-CCCCCHHH
Confidence            999999 999 988 7753

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=100.00  E-value=2.9e-44  Score=312.49  Aligned_cols=291  Identities=16%  Similarity=0.102  Sum_probs=223.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcC--CCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQG--VDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~Vi~   79 (305)
                      |+||||||+||||++|++.|++.|++|++++|++..........   ....+++++++|+.|.+.+.+++++  +|+|||
T Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   86 (357)
T 1rkx_A           10 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETA---RVADGMQSEIGDIRDQNKLLESIREFQPEIVFH   86 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHT---TTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhh---ccCCceEEEEccccCHHHHHHHHHhcCCCEEEE
Confidence            78999999999999999999999999999999876443221110   1134789999999999999999885  899999


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhH
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWY  159 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y  159 (305)
                      +|+......+.+.+...+++|+.++.+++++|.+.+++++|||+||.++|+....   ..+++|+++..+.      +.|
T Consensus        87 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~---~~~~~E~~~~~~~------~~Y  157 (357)
T 1rkx_A           87 MAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEW---IWGYRENEAMGGY------DPY  157 (357)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCS---SSCBCTTSCBCCS------SHH
T ss_pred             CCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCc---CCCCCCCCCCCCC------Ccc
Confidence            9996432222345567899999999999999998723899999999998876432   1467888776665      789


Q ss_pred             HHHHHHHHHHHHHHHHHc---------CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCC--CCCccceeHHH
Q 039049          160 AYAKTIAEKEAWRIAKDC---------GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYP--NTTVGFVHIDD  228 (305)
Q Consensus       160 ~~sK~~~E~~~~~~~~~~---------~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D  228 (305)
                      +.+|.++|.+++.++.++         +++++++||+++|||+..........++..+..+.++.++  +..++|+|++|
T Consensus       158 ~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~v~D  237 (357)
T 1rkx_A          158 SNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLE  237 (357)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeeccEeHHH
Confidence            999999999999988765         9999999999999998643334445566777777665443  34789999999


Q ss_pred             HHHHHHHhhcc-----cccCceEEEec---CCcCHHHHHHHHHHhCCCC-CCCCCCCCCCCCCCCcccchhHHHH-hCCC
Q 039049          229 VVGAHILAMEE-----TRASGRLICSS---SVAHWSPIIEMLKATYPSY-PYESKCSKQEGDNSPHSMDTSKLFE-LGFV  298 (305)
Q Consensus       229 ~a~~~~~~~~~-----~~~~~~~~~~~---~~~s~~el~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-lg~~  298 (305)
                      +|++++.++++     ...++.||+++   +.+|+.|+++.+.+.+|.. ++...............+|++|+++ ||| 
T Consensus       238 va~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~-  316 (357)
T 1rkx_A          238 PLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHEAHYLKLDCSKAKMQLGW-  316 (357)
T ss_dssp             HHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC-------CCCCCCBCCHHHHHHHCC-
T ss_pred             HHHHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCccccCCCCCCcCcccccCCHHHHHHHhCC-
Confidence            99999999875     23467899963   5899999999999998752 2111111123345567899999999 999 


Q ss_pred             ccc-cCCC
Q 039049          299 GFK-SVPQ  305 (305)
Q Consensus       299 ~~~-~l~e  305 (305)
                      +|+ +|+|
T Consensus       317 ~p~~~l~e  324 (357)
T 1rkx_A          317 HPRWNLNT  324 (357)
T ss_dssp             CCCCCHHH
T ss_pred             CcCCcHHH
Confidence            987 7653

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=100.00  E-value=3.9e-44  Score=307.28  Aligned_cols=283  Identities=17%  Similarity=0.151  Sum_probs=222.7

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcC--CCEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQG--VDGVF   78 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~Vi   78 (305)
                      ||+||||||+||||++|++.|+++|++|++++|++.. ..   +        +++++.+|+.|.+.+.+++++  +|+||
T Consensus        12 ~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~---l--------~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   79 (321)
T 2pk3_A           12 SMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL---P--------NVEMISLDIMDSQRVKKVISDIKPDYIF   79 (321)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC---T--------TEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             cceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc---c--------eeeEEECCCCCHHHHHHHHHhcCCCEEE
Confidence            5889999999999999999999999999999998754 11   1        678999999999999999875  99999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchh
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLW  158 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  158 (305)
                      |+|+........+.+...+++|+.++.+++++|++..++++|||+||.++|+....  ...+++|+++..|.      +.
T Consensus        80 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~--~~~~~~E~~~~~~~------~~  151 (321)
T 2pk3_A           80 HLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILP--EESPVSEENQLRPM------SP  151 (321)
T ss_dssp             ECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCG--GGCSBCTTSCCBCC------SH
T ss_pred             EcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCC--CCCCCCCCCCCCCC------Cc
Confidence            99998654323345677899999999999999977535889999999998875310  12688998887665      78


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHh---c--CCC-CCC--CCCccceeHHHHH
Q 039049          159 YAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVK---G--LRG-EYP--NTTVGFVHIDDVV  230 (305)
Q Consensus       159 Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~---~--~~~-~~~--~~~~~~i~v~D~a  230 (305)
                      |+.+|.++|.+++.++.+++++++++||+++|||+.... .....++..+..   +  .+. .++  ...++|+|++|+|
T Consensus       152 Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva  230 (321)
T 2pk3_A          152 YGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLG-FVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIV  230 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCTT-SHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCCC-chHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHH
Confidence            999999999999999888899999999999999986542 223334444444   5  232 233  3378999999999


Q ss_pred             HHHHHhhcccccCceEEEe-cCCcCHHHHHHHHHHhCCCCC-CCCCCC-CCCCCCCCcccchhHHHH-hCCCccc-cCCC
Q 039049          231 GAHILAMEETRASGRLICS-SSVAHWSPIIEMLKATYPSYP-YESKCS-KQEGDNSPHSMDTSKLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~-lg~~~~~-~l~e  305 (305)
                      ++++.+++++..++.||++ +..+|+.|+++.+.+.+|... +...+. .+........+|++|+++ ||| +|+ +|+|
T Consensus       231 ~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~~d~~k~~~~lG~-~p~~~~~e  309 (321)
T 2pk3_A          231 QAYWLLSQYGKTGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTELNPLQLRPSEVPTLIGSNKRLKDSTGW-KPRIPLEK  309 (321)
T ss_dssp             HHHHHHHHHCCTTCEEEESCSCEEEHHHHHHHHHHHSSSCCEEEECGGGCCSSCCSBCCBCCHHHHHHHCC-CCCSCHHH
T ss_pred             HHHHHHHhCCCCCCeEEeCCCCCeeHHHHHHHHHHHhCCCCceeeccccCCCcccchhccCHHHHHHHcCC-CcCCCHHH
Confidence            9999999887667789996 568999999999999997521 111110 123344668899999999 999 998 7753

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=100.00  E-value=1.6e-44  Score=311.87  Aligned_cols=301  Identities=36%  Similarity=0.596  Sum_probs=211.0

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      +|+||||||+||||++|++.|+++|++|+++.|+..+......+.... ...+++++++|+.|.+.+.++++++|+|||+
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~   87 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-ELGDLKIFRADLTDELSFEAPIAGCDFVFHV   87 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-GGSCEEEEECCTTTSSSSHHHHTTCSEEEEE
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-CCCcEEEEecCCCChHHHHHHHcCCCEEEEe
Confidence            378999999999999999999999999999999865433222222221 1246889999999999999999999999999


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccc--cc-cch
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYC--KH-YNL  157 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~--~~-~~~  157 (305)
                      |+..... ..++....+++|+.++.+++++|.+..+++||||+||.+++++........+++|+++..+...  .. ...
T Consensus        88 A~~~~~~-~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  166 (338)
T 2rh8_A           88 ATPVHFA-SEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTW  166 (338)
T ss_dssp             SSCCCC----------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCC
T ss_pred             CCccCCC-CCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccc
Confidence            9975321 2233344889999999999999998823899999999885543211100136778765432211  10 002


Q ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCC--------CCCccceeHHHH
Q 039049          158 WYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYP--------NTTVGFVHIDDV  229 (305)
Q Consensus       158 ~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~i~v~D~  229 (305)
                      .|+.||.++|.+++.+.++++++++++||+++|||............+.....+....++        .+.++|+|++|+
T Consensus       167 ~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~v~Dv  246 (338)
T 2rh8_A          167 GYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHVEDV  246 (338)
T ss_dssp             CCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHSSEEEEEHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccccccccccCcccEEEHHHH
Confidence            599999999999999887789999999999999998654332222222222333221111        123489999999


Q ss_pred             HHHHHHhhcccccCceEEEecCCcCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCcccchhHHHHhCCCccc-cCCC
Q 039049          230 VGAHILAMEETRASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELGFVGFK-SVPQ  305 (305)
Q Consensus       230 a~~~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~-~l~e  305 (305)
                      |++++.+++++..++.|+++++.+|+.|+++.+.+..+..++|......... ....+|++|+++||| +|+ +|+|
T Consensus       247 a~a~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~d~~k~~~lG~-~p~~~l~~  321 (338)
T 2rh8_A          247 CRAHIFVAEKESASGRYICCAANTSVPELAKFLSKRYPQYKVPTDFGDFPPK-SKLIISSEKLVKEGF-SFKYGIEE  321 (338)
T ss_dssp             HHHHHHHHHCTTCCEEEEECSEEECHHHHHHHHHHHCTTSCCCCCCTTSCSS-CSCCCCCHHHHHHTC-CCSCCHHH
T ss_pred             HHHHHHHHcCCCcCCcEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCCcC-cceeechHHHHHhCC-CCCCCHHH
Confidence            9999999987666678988777799999999999988754444322222111 237889999944999 998 7753

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=100.00  E-value=5.8e-44  Score=306.30  Aligned_cols=300  Identities=35%  Similarity=0.579  Sum_probs=212.0

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEe-CCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVR-DPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFH   79 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~   79 (305)
                      +|+||||||+||||++|++.|+++|++|+++.| ++........+...+....+++++.+|+.|.+.+.++++++|+|||
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih   80 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFH   80 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEE
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEE
Confidence            478999999999999999999999999999998 5532111111211111123678899999999999999999999999


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccc--cccch
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYC--KHYNL  157 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~--~~~~~  157 (305)
                      +|+..... ..++....+++|+.++.+++++|.+..++++|||+||.++++.....  ..+++|+++....+.  ..+..
T Consensus        81 ~A~~~~~~-~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~--~~~~~e~~~~~~~~~~~~~p~~  157 (322)
T 2p4h_X           81 TASPIDFA-VSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKD--KDVLDESDWSDVDLLRSVKPFG  157 (322)
T ss_dssp             CCCCC---------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSC--CSEECTTCCCCHHHHHHHCCTT
T ss_pred             cCCcccCC-CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCC--CeecCCccccchhhhcccCccc
Confidence            99764211 12233458899999999999999876457899999998865543221  246788775443221  01112


Q ss_pred             -hHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHh
Q 039049          158 -WYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILA  236 (305)
Q Consensus       158 -~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  236 (305)
                       .|+.||.++|.+++.+.++++++++++||+++|||............+.....+....++....+|+|++|+|++++.+
T Consensus       158 ~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~a~~~~  237 (322)
T 2p4h_X          158 WNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHIYL  237 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCEEEEEEEEHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcCCCcCEEEHHHHHHHHHHH
Confidence             5999999999999998877899999999999999976543222222222233444333333334899999999999999


Q ss_pred             hcccccCceEEEecCCcCHHHHHHHHHHhCCCCCCCCC--CCCCCCCCCCcccchhHHHHhCCCccc-cCCC
Q 039049          237 MEETRASGRLICSSSVAHWSPIIEMLKATYPSYPYESK--CSKQEGDNSPHSMDTSKLFELGFVGFK-SVPQ  305 (305)
Q Consensus       237 ~~~~~~~~~~~~~~~~~s~~el~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~lg~~~~~-~l~e  305 (305)
                      ++.+...+.||++++.+|+.|+++.+.+..+..+++..  ...... .....+|++|+++||| +|+ +|+|
T Consensus       238 ~~~~~~~g~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~k~~~lG~-~p~~~~~~  307 (322)
T 2p4h_X          238 LENSVPGGRYNCSPFIVPIEEMSQLLSAKYPEYQILTVDELKEIKG-ARLPDLNTKKLVDAGF-DFKYTIED  307 (322)
T ss_dssp             HHSCCCCEEEECCCEEEEHHHHHHHHHHHCTTSCCCCTTTTTTCCC-EECCEECCHHHHHTTC-CCCCCHHH
T ss_pred             hhCcCCCCCEEEcCCCCCHHHHHHHHHHhCCCCCCCCCccccCCCC-CcceecccHHHHHhCC-ccCCCHHH
Confidence            98765556788777789999999999998865444432  111111 1457899999944999 998 7753

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=100.00  E-value=3.2e-43  Score=304.93  Aligned_cols=291  Identities=16%  Similarity=0.185  Sum_probs=225.2

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHc--CCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDK--GHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      ||+||||||+||||++|++.|+++  |++|++++|+...... ..+....  ..+++++.+|+.|.+.+.++++++|+||
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~d~vi   80 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNK-ANLEAIL--GDRVELVVGDIADAELVDKLAAKADAIV   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCG-GGTGGGC--SSSEEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCCh-hHHhhhc--cCCeEEEECCCCCHHHHHHHhhcCCEEE
Confidence            679999999999999999999998  8999999997532111 1111111  2478999999999999999999999999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCC--------CCCCcccCCCCCCCcc
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHD--------AQQVSPLNESHWSDPD  150 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~--------~~~~~~~~E~~~~~~~  150 (305)
                      |+|+......+...+...+++|+.++.+++++|.+. ++ +|||+||.++|+....        .....+++|+++..+.
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~  158 (348)
T 1oc2_A           81 HYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-DI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPS  158 (348)
T ss_dssp             ECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCC
T ss_pred             ECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHh-CC-eEEEecccceeCCCcccccccccccccCCCcCCCCCCCCC
Confidence            999986532123345668899999999999999998 77 9999999998875421        0011578888877665


Q ss_pred             cccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCC-C--CCCccceeHH
Q 039049          151 YCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEY-P--NTTVGFVHID  227 (305)
Q Consensus       151 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~i~v~  227 (305)
                            +.|+.+|..+|.+++.++.+++++++++||+++||+..... .....++.....+.+... +  ...++|+|++
T Consensus       159 ------~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  231 (348)
T 1oc2_A          159 ------SPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE-KFIPRQITNILAGIKPKLYGEGKNVRDWIHTN  231 (348)
T ss_dssp             ------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT-SHHHHHHHHHHHTCCCEEETTSCCEEECEEHH
T ss_pred             ------CccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCcc-chHHHHHHHHHcCCCceEecCCCceEeeEEHH
Confidence                  78999999999999999888899999999999999986432 233445666666665432 3  3478999999


Q ss_pred             HHHHHHHHhhcccccCceEEEe-cCCcCHHHHHHHHHHhCCCCC-CCCCCCCCCCCCCCcccchhHHHH-hCCCccc-c-
Q 039049          228 DVVGAHILAMEETRASGRLICS-SSVAHWSPIIEMLKATYPSYP-YESKCSKQEGDNSPHSMDTSKLFE-LGFVGFK-S-  302 (305)
Q Consensus       228 D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-lg~~~~~-~-  302 (305)
                      |+|++++.+++.+..++.||++ +..+|+.|+++.+.+.+|... ..............+.+|++|+++ ||| +|+ + 
T Consensus       232 Dva~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~-~p~~~~  310 (348)
T 1oc2_A          232 DHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDASKLRDELGW-TPQFTD  310 (348)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCCTTCCCBCCBCCHHHHHHHCC-CCSCCC
T ss_pred             HHHHHHHHHhhCCCCCCeEEeCCCCCCCHHHHHHHHHHHhCCCccccccCCCCCCcccccccCHHHHHHHcCC-CCCCCc
Confidence            9999999999877667789996 568999999999999997532 111122233333456799999999 999 887 6 


Q ss_pred             CC
Q 039049          303 VP  304 (305)
Q Consensus       303 l~  304 (305)
                      |+
T Consensus       311 ~~  312 (348)
T 1oc2_A          311 FS  312 (348)
T ss_dssp             HH
T ss_pred             HH
Confidence            65

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=100.00  E-value=4.4e-44  Score=311.93  Aligned_cols=283  Identities=17%  Similarity=0.162  Sum_probs=221.8

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHH--cCCeEEEEEeCCCcc-------cchhhhhhccCccCceEEEEccCCCcchHHHH-
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLD--KGHMVRTTVRDPEDL-------SKVGFLWELNGAEERLKIMKADLLMEGSFDEA-   70 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~--~g~~V~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-   70 (305)
                      ||+||||||+||||++|++.|++  .|++|++++|+....       ..........  ..+++++.+|+.|++.+.++ 
T Consensus        10 ~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~   87 (362)
T 3sxp_A           10 NQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLI--GFKGEVIAADINNPLDLRRLE   87 (362)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGT--TCCSEEEECCTTCHHHHHHHT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhcc--ccCceEEECCCCCHHHHHHhh
Confidence            37899999999999999999999  899999999976511       1111111111  23679999999999999999 


Q ss_pred             hcCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcc
Q 039049           71 IQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPD  150 (305)
Q Consensus        71 ~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~  150 (305)
                      ..++|+|||||+....  +...+...+++|+.++.+++++|++. +++ |||+||.++|+...     .+++|+++..|.
T Consensus        88 ~~~~D~vih~A~~~~~--~~~~~~~~~~~Nv~gt~~ll~aa~~~-~~~-~V~~SS~~vyg~~~-----~~~~E~~~~~p~  158 (362)
T 3sxp_A           88 KLHFDYLFHQAAVSDT--TMLNQELVMKTNYQAFLNLLEIARSK-KAK-VIYASSAGVYGNTK-----APNVVGKNESPE  158 (362)
T ss_dssp             TSCCSEEEECCCCCGG--GCCCHHHHHHHHTHHHHHHHHHHHHT-TCE-EEEEEEGGGGCSCC-----SSBCTTSCCCCS
T ss_pred             ccCCCEEEECCccCCc--cccCHHHHHHHHHHHHHHHHHHHHHc-CCc-EEEeCcHHHhCCCC-----CCCCCCCCCCCC
Confidence            7899999999997654  34567779999999999999999998 776 99999999887542     488999988877


Q ss_pred             cccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCC---CchHHHHHHHHhcCCCCC-C--CCCccce
Q 039049          151 YCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQP---TSTLLLILAMVKGLRGEY-P--NTTVGFV  224 (305)
Q Consensus       151 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~-~--~~~~~~i  224 (305)
                            +.|+.+|.++|.+++.++.+  ++++++||+++|||+.....   .....++.....+.+... +  ...++|+
T Consensus       159 ------~~Y~~sK~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i  230 (362)
T 3sxp_A          159 ------NVYGFSKLCMDEFVLSHSND--NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFV  230 (362)
T ss_dssp             ------SHHHHHHHHHHHHHHHTTTT--SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECE
T ss_pred             ------ChhHHHHHHHHHHHHHHhcc--CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccE
Confidence                  88999999999999887655  89999999999999865431   334556667777765443 3  3489999


Q ss_pred             eHHHHHHHHHHhhcccccCceEEEe-cCCcCHHHHHHHHHHhCCCCCCCCCCCCC-CCCCCCcccchhHHHH-hCCCccc
Q 039049          225 HIDDVVGAHILAMEETRASGRLICS-SSVAHWSPIIEMLKATYPSYPYESKCSKQ-EGDNSPHSMDTSKLFE-LGFVGFK  301 (305)
Q Consensus       225 ~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-lg~~~~~  301 (305)
                      |++|+|++++.+++.+..+ .||++ ++.+|+.|+++.+.+.+|..++. ..... ........+|++|+++ ||| +|+
T Consensus       231 ~v~Dva~ai~~~~~~~~~g-~~~i~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~d~~k~~~~lG~-~p~  307 (362)
T 3sxp_A          231 YIEDVIQANVKAMKAQKSG-VYNVGYSQARSYNEIVSILKEHLGDFKVT-YIKNPYAFFQKHTQAHIEPTILDLDY-TPL  307 (362)
T ss_dssp             EHHHHHHHHHHHTTCSSCE-EEEESCSCEEEHHHHHHHHHHHHCCCEEE-CCC-------CCCCBCCHHHHHHHCC-CCC
T ss_pred             EHHHHHHHHHHHHhcCCCC-EEEeCCCCCccHHHHHHHHHHHcCCCceE-ECCCCCcCcccceecCHHHHHHHhCC-CCC
Confidence            9999999999999987655 99995 67899999999999999832221 11112 4456678999999998 999 988


Q ss_pred             -cCCC
Q 039049          302 -SVPQ  305 (305)
Q Consensus       302 -~l~e  305 (305)
                       +|+|
T Consensus       308 ~~l~e  312 (362)
T 3sxp_A          308 YDLES  312 (362)
T ss_dssp             CCHHH
T ss_pred             CCHHH
Confidence             7753

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=100.00  E-value=1.1e-43  Score=306.39  Aligned_cols=289  Identities=22%  Similarity=0.243  Sum_probs=224.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHc---C---CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDK---G---HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVD   75 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~---g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d   75 (305)
                      |+||||||+||||++|+++|+++   |   ++|++++|+..... ...+.... ...+++++.+|+.|++.+.+++.++|
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~-~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~d   78 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGN-RANLAPVD-ADPRLRFVHGDIRDAGLLARELRGVD   78 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCC-GGGGGGGT-TCTTEEEEECCTTCHHHHHHHTTTCC
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCc-hhhhhhcc-cCCCeEEEEcCCCCHHHHHHHhcCCC
Confidence            57999999999999999999997   8   99999999753211 11111111 13478999999999999999999999


Q ss_pred             EEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCccccccc
Q 039049           76 GVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHY  155 (305)
Q Consensus        76 ~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  155 (305)
                      +|||+|+......+..++...+++|+.++.+++++|.+. ++++|||+||.++|+...    ..+++|+++..|.     
T Consensus        79 ~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~-~~~~~v~~SS~~vyg~~~----~~~~~E~~~~~~~-----  148 (337)
T 1r6d_A           79 AIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-GVGRVVHVSTNQVYGSID----SGSWTESSPLEPN-----  148 (337)
T ss_dssp             EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGGGCCCS----SSCBCTTSCCCCC-----
T ss_pred             EEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEecchHHhCCCC----CCCCCCCCCCCCC-----
Confidence            999999976532122345668999999999999999998 889999999999887543    2578888877665     


Q ss_pred             chhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCC-C--CCCccceeHHHHHHH
Q 039049          156 NLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEY-P--NTTVGFVHIDDVVGA  232 (305)
Q Consensus       156 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~i~v~D~a~~  232 (305)
                       +.|+.+|.++|.+++.++++++++++++||+++|||..... .....++.....+.+... +  +..++|+|++|+|++
T Consensus       149 -~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a  226 (337)
T 1r6d_A          149 -SPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPE-KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRG  226 (337)
T ss_dssp             -SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT-SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHH
T ss_pred             -CchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCC-ChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHH
Confidence             78999999999999999888899999999999999986432 233445566666654332 3  347899999999999


Q ss_pred             HHHhhcccccCceEEEe-cCCcCHHHHHHHHHHhCCCCC-CCCCCCCCCCCCCCcccchhHHHH-hCCCccc-cCCC
Q 039049          233 HILAMEETRASGRLICS-SSVAHWSPIIEMLKATYPSYP-YESKCSKQEGDNSPHSMDTSKLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       233 ~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-lg~~~~~-~l~e  305 (305)
                      ++.+++++..++.||++ ++.+|+.|+++.+.+.+|... .......+......+.+|++|+++ ||| +|+ +|+|
T Consensus       227 ~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~-~p~~~~~e  302 (337)
T 1r6d_A          227 IALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHDLRYSLDGGKIERELGY-RPQVSFAD  302 (337)
T ss_dssp             HHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEECCCTTCCCBCCBCCHHHHHHHCC-CCCSCHHH
T ss_pred             HHHHHhCCCCCCEEEeCCCCCccHHHHHHHHHHHhCCCcccceecCCCCCCcceeecCHHHHHHHcCC-CCCCCHHH
Confidence            99999877667789996 568999999999999987531 111111222233456789999999 999 886 7653

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=100.00  E-value=7.9e-44  Score=311.90  Aligned_cols=287  Identities=20%  Similarity=0.158  Sum_probs=216.0

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcC-CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKG-HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFH   79 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~   79 (305)
                      ||+||||||+||||++|++.|++.| ++|++++|+......  .+.    ...+++++.+|+.|++.+.++++++|+|||
T Consensus        32 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~--~l~----~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih  105 (377)
T 2q1s_A           32 NTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI--NVP----DHPAVRFSETSITDDALLASLQDEYDYVFH  105 (377)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG--GSC----CCTTEEEECSCTTCHHHHHHCCSCCSEEEE
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh--hcc----CCCceEEEECCCCCHHHHHHHhhCCCEEEE
Confidence            5789999999999999999999999 999999998653221  111    134789999999999999999999999999


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccC--CCC---CC-Cccccc
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLN--ESH---WS-DPDYCK  153 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~--E~~---~~-~~~~~~  153 (305)
                      +|+......+...+...+++|+.++.+++++|++..++++|||+||.++|+....    .+++  |++   +. .|.   
T Consensus       106 ~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~----~~~~~~E~~~~~~~~~~~---  178 (377)
T 2q1s_A          106 LATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTF----DDAKATEETDIVSLHNND---  178 (377)
T ss_dssp             CCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC------------------CCCCCCCSSCCC---
T ss_pred             CCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCC----CCcCcccccccccccCCC---
Confidence            9998653222335667899999999999999977536789999999998876432    4677  877   43 444   


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCC---------CCC---CCchHHHHHHHHhcCCCCC-C--C
Q 039049          154 HYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLL---------APQ---PTSTLLLILAMVKGLRGEY-P--N  218 (305)
Q Consensus       154 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~---------~~~---~~~~~~~~~~~~~~~~~~~-~--~  218 (305)
                         +.|+.+|.++|.+++.++.+++++++++||+++||+..         .+.   ......++..+..+.++.. +  +
T Consensus       179 ---~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~  255 (377)
T 2q1s_A          179 ---SPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGV  255 (377)
T ss_dssp             ---SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGC
T ss_pred             ---CchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCC
Confidence               78999999999999999888899999999999999976         210   2234456666777766543 3  3


Q ss_pred             CCccceeHHHHHHH-HHHhhcccccCceEEEe-cCCcCHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-CcccchhHHHH-
Q 039049          219 TTVGFVHIDDVVGA-HILAMEETRASGRLICS-SSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNS-PHSMDTSKLFE-  294 (305)
Q Consensus       219 ~~~~~i~v~D~a~~-~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-  294 (305)
                      ..++|+|++|+|++ ++.+++++..+ .||++ ++.+|+.|+++.+.+.+|........+.+..... ...+|++|+++ 
T Consensus       256 ~~~~~i~v~Dva~a~i~~~~~~~~~g-~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~d~~k~~~~  334 (377)
T 2q1s_A          256 ATRDFIFVEDVANGLIACAADGTPGG-VYNIASGKETSIADLATKINEITGNNTELDRLPKRPWDNSGKRFGSPEKARRE  334 (377)
T ss_dssp             CEECCEEHHHHHHHHHHHHHHCCTTE-EEECCCCCCEEHHHHHHHHHHHHTCCSCCCCCCCCGGGCC-CCCCCCHHHHHH
T ss_pred             eEEeeEEHHHHHHHHHHHHHhcCCCC-eEEecCCCceeHHHHHHHHHHHhCCCCCceeCCCCccccccccccCHHHHHHH
Confidence            48999999999999 99999886644 99996 5789999999999999875311111111222334 67899999999 


Q ss_pred             hCCCccc-cCCC
Q 039049          295 LGFVGFK-SVPQ  305 (305)
Q Consensus       295 lg~~~~~-~l~e  305 (305)
                      ||| +|+ +|+|
T Consensus       335 lG~-~p~~~l~e  345 (377)
T 2q1s_A          335 LGF-SADVSIDD  345 (377)
T ss_dssp             HCC-CCCCCHHH
T ss_pred             cCC-CCCCCHHH
Confidence            999 987 7653

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=100.00  E-value=2.7e-43  Score=308.63  Aligned_cols=287  Identities=17%  Similarity=0.148  Sum_probs=223.3

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ||+||||||+||||++|++.|+++|++|++++|+........        ..+++++.+|+.|.+.+.++++++|+|||+
T Consensus        29 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~  100 (379)
T 2c5a_A           29 NLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED--------MFCDEFHLVDLRVMENCLKVTEGVDHVFNL  100 (379)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG--------GTCSEEEECCTTSHHHHHHHHTTCSEEEEC
T ss_pred             CCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhc--------cCCceEEECCCCCHHHHHHHhCCCCEEEEC
Confidence            689999999999999999999999999999999875432211        236889999999999999999999999999


Q ss_pred             ccccccCCC-CchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCC-CCcccCCCC--CCCcccccccc
Q 039049           81 ASPVLVPYD-NNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQ-QVSPLNESH--WSDPDYCKHYN  156 (305)
Q Consensus        81 a~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~-~~~~~~E~~--~~~~~~~~~~~  156 (305)
                      |+....... .+.+...+++|+.++.+++++|++. ++++|||+||.++|+...... ...+++|++  +..|.      
T Consensus       101 A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~------  173 (379)
T 2c5a_A          101 AADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN-GIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQ------  173 (379)
T ss_dssp             CCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCS------
T ss_pred             ceecCcccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCC------
Confidence            997653211 3456778999999999999999998 899999999999887642211 113567766  33333      


Q ss_pred             hhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCC---CchHHHHHHHHhcCC-CC-CC--CCCccceeHHHH
Q 039049          157 LWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQP---TSTLLLILAMVKGLR-GE-YP--NTTVGFVHIDDV  229 (305)
Q Consensus       157 ~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~---~~~~~~~~~~~~~~~-~~-~~--~~~~~~i~v~D~  229 (305)
                      +.|+.+|.++|.+++.++++++++++++||+++|||......   .....++..+..+.+ +. ++  ...++|+|++|+
T Consensus       174 ~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dv  253 (379)
T 2c5a_A          174 DAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDEC  253 (379)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHH
Confidence            789999999999999998888999999999999999765322   134456666666654 22 33  347899999999


Q ss_pred             HHHHHHhhcccccCceEEEe-cCCcCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCcccchhHHHH-hCCCccc-cCCC
Q 039049          230 VGAHILAMEETRASGRLICS-SSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       230 a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lg~~~~~-~l~e  305 (305)
                      |++++.+++++ .++.||++ ++.+|+.|+++.+.+.+|.. .+..............+|++|+++ ||| +|+ +|+|
T Consensus       254 a~ai~~~l~~~-~~~~~ni~~~~~~s~~e~~~~i~~~~g~~-~~~~~~p~~~~~~~~~~d~~k~~~~lG~-~p~~~l~e  329 (379)
T 2c5a_A          254 VEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEMVLSFEEKK-LPIHHIPGPEGVRGRNSDNNLIKEKLGW-APNMRLKE  329 (379)
T ss_dssp             HHHHHHHHHSS-CCSCEEECCCCCEEHHHHHHHHHHTTTCC-CCEEEECCCCCCSBCEECCHHHHHHHSC-CCCCCHHH
T ss_pred             HHHHHHHhhcc-CCCeEEeCCCCccCHHHHHHHHHHHhCCC-CceeeCCCCCCcccccCCHHHHHHHhCC-CCCCCHHH
Confidence            99999999876 56789996 57899999999999999753 111111111234457899999999 999 987 7653

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=100.00  E-value=2.2e-43  Score=304.47  Aligned_cols=289  Identities=18%  Similarity=0.184  Sum_probs=223.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC--CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG--HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~   79 (305)
                      |+||||||+||||++|+++|+++|  ++|++++|+..... ...+.... ...+++++.+|+.|.+.+.+++.++|+|||
T Consensus         4 m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~-~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih   81 (336)
T 2hun_A            4 MKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSN-PANLKDLE-DDPRYTFVKGDVADYELVKELVRKVDGVVH   81 (336)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCC-GGGGTTTT-TCTTEEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred             CeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCc-hhHHhhhc-cCCceEEEEcCCCCHHHHHHHhhCCCEEEE
Confidence            689999999999999999999996  89999999752111 11111111 134789999999999999999999999999


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCc-cEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchh
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSV-KRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLW  158 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  158 (305)
                      +|+......+.+.+...+++|+.++.+++++|.+. +. ++|||+||.++|+...    ..+++|+++..+.      +.
T Consensus        82 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~~SS~~vyg~~~----~~~~~E~~~~~~~------~~  150 (336)
T 2hun_A           82 LAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRE-NPEVRFVHVSTDEVYGDIL----KGSFTENDRLMPS------SP  150 (336)
T ss_dssp             CCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHH-CTTSEEEEEEEGGGGCCCS----SSCBCTTBCCCCC------SH
T ss_pred             CCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEeccHHHHCCCC----CCCcCCCCCCCCC------Cc
Confidence            99986432223455678999999999999999988 54 7999999999887543    2578888877665      78


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCC-CC--CCccceeHHHHHHHHHH
Q 039049          159 YAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEY-PN--TTVGFVHIDDVVGAHIL  235 (305)
Q Consensus       159 Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~i~v~D~a~~~~~  235 (305)
                      |+.+|.++|.+++.++.+++++++++||+++|||...+. .....++.....+..... ++  ..++|+|++|+|++++.
T Consensus       151 Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  229 (336)
T 2hun_A          151 YSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPE-KLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIEL  229 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTT-SHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcC-chHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHH
Confidence            999999999999999888999999999999999986432 233445566666654332 33  37899999999999999


Q ss_pred             hhcccccCceEEEe-cCCcCHHHHHHHHHHhCCCC-CCCCCCCCCCCCCCCcccchhHHHH-hCCCccc-cCCC
Q 039049          236 AMEETRASGRLICS-SSVAHWSPIIEMLKATYPSY-PYESKCSKQEGDNSPHSMDTSKLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       236 ~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-lg~~~~~-~l~e  305 (305)
                      +++++..++.||++ +..+|+.|+++.+.+.+|.. +.......+......+.+|++|+++ ||| +|+ +|+|
T Consensus       230 ~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~-~p~~~~~~  302 (336)
T 2hun_A          230 VLLKGESREIYNISAGEEKTNLEVVKIILRLMGKGEELIELVEDRPGHDLRYSLDSWKITRDLKW-RPKYTFDE  302 (336)
T ss_dssp             HHHHCCTTCEEEECCSCEECHHHHHHHHHHHTTCCSTTEEEECCCTTCCCCCCBCCHHHHHHHCC-CCSSCHHH
T ss_pred             HHhCCCCCCEEEeCCCCcccHHHHHHHHHHHhCCCcccccccCCCCCchhhhcCCHHHHHHHhCC-CCCCCHHH
Confidence            99876667789996 56799999999999999753 1111112223333456789999999 999 887 7653

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=100.00  E-value=7.3e-44  Score=304.26  Aligned_cols=283  Identities=21%  Similarity=0.250  Sum_probs=219.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi~   79 (305)
                      |+||||||+||||++++++|+++|++|++++|.......  .+      ..+++++.+|+.|.+.+.++++  ++|+|||
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~   72 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE--NV------PKGVPFFRVDLRDKEGVERAFREFRPTHVSH   72 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG--GS------CTTCCEECCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh--hc------ccCeEEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence            579999999999999999999999999999885432111  11      1267889999999999999987  8999999


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccc-eeeeccCCCCCCcccCCCCCCCcccccccchh
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSC-SSIRYRHDAQQVSPLNESHWSDPDYCKHYNLW  158 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~-~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  158 (305)
                      +|+......+.+.+...+++|+.++.+++++|++. ++++|||+||. ++|+....   ..+.+|+++..|.      +.
T Consensus        73 ~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iv~~SS~~~~~g~~~~---~~~~~E~~~~~~~------~~  142 (311)
T 2p5y_A           73 QAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQY-GVEKLVFASTGGAIYGEVPE---GERAEETWPPRPK------SP  142 (311)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEHHHHHCCCCT---TCCBCTTSCCCCC------SH
T ss_pred             CccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeCCChhhcCCCCC---CCCcCCCCCCCCC------Ch
Confidence            99976532223455678999999999999999988 88999999998 76654221   2578888877665      78


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCC--CchHHHHHHHHhcCCCC-C-----CC--CCccceeHHH
Q 039049          159 YAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQP--TSTLLLILAMVKGLRGE-Y-----PN--TTVGFVHIDD  228 (305)
Q Consensus       159 Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~-~-----~~--~~~~~i~v~D  228 (305)
                      |+.+|.++|.+++.++++++++++++||+++|||+.....  .....++..+..+.+.. +     ++  ..++|+|++|
T Consensus       143 Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D  222 (311)
T 2p5y_A          143 YAASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGD  222 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHH
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHH
Confidence            9999999999999998888999999999999999865432  12234455555665432 2     33  3789999999


Q ss_pred             HHHHHHHhhcccccCceEEEe-cCCcCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCcccchhHHHHhCCCccc-cCCC
Q 039049          229 VVGAHILAMEETRASGRLICS-SSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELGFVGFK-SVPQ  305 (305)
Q Consensus       229 ~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~-~l~e  305 (305)
                      +|++++.+++.+  ++.||++ ++.+|+.|+++.+.+.+|..........+........+|++|+++||| +|+ +|+|
T Consensus       223 va~a~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~-~p~~~~~~  298 (311)
T 2p5y_A          223 VAEAHALALFSL--EGIYNVGTGEGHTTREVLMAVAEAAGKAPEVQPAPPRPGDLERSVLSPLKLMAHGW-RPKVGFQE  298 (311)
T ss_dssp             HHHHHHHHHHHC--CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEEECCCTTCCSBCCBCCHHHHTTTC-CCSSCHHH
T ss_pred             HHHHHHHHHhCC--CCEEEeCCCCCccHHHHHHHHHHHhCCCCCceeCCCCccchhhccCCHHHHHHCCC-CCCCCHHH
Confidence            999999999875  6789996 678999999999999987531111112223344568899999988999 887 7653

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=100.00  E-value=2.1e-44  Score=307.71  Aligned_cols=282  Identities=14%  Similarity=0.143  Sum_probs=219.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHc--CCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDK--GHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGV   77 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~V   77 (305)
                      |+||||||+||||++|+++|+++  |++|++++|++....    +      ..+++++.+|+.|.+.+.++++  ++|+|
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~----~------~~~~~~~~~D~~d~~~~~~~~~~~~~d~v   72 (312)
T 2yy7_A            3 PKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD----V------VNSGPFEVVNALDFNQIEHLVEVHKITDI   72 (312)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH----H------HHSSCEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred             ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc----c------cCCCceEEecCCCHHHHHHHHhhcCCCEE
Confidence            78999999999999999999999  899999999865421    1      1156889999999999999998  89999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccch
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNL  157 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  157 (305)
                      ||+|+..... ....+...+++|+.++.+++++|++. ++++|||+||.++|+....   ..+.+|+++..|.      +
T Consensus        73 ih~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~~~~~~---~~~~~e~~~~~~~------~  141 (312)
T 2yy7_A           73 YLMAALLSAT-AEKNPAFAWDLNMNSLFHVLNLAKAK-KIKKIFWPSSIAVFGPTTP---KENTPQYTIMEPS------T  141 (312)
T ss_dssp             EECCCCCHHH-HHHCHHHHHHHHHHHHHHHHHHHHTT-SCSEEECCEEGGGCCTTSC---SSSBCSSCBCCCC------S
T ss_pred             EECCccCCCc-hhhChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHHhCCCCC---CCCccccCcCCCC------c
Confidence            9999976532 23456678999999999999999998 8899999999998876432   2467788776665      8


Q ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC---chHHHHHHHH-hcCCCCC--CCCCccceeHHHHHH
Q 039049          158 WYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPT---STLLLILAMV-KGLRGEY--PNTTVGFVHIDDVVG  231 (305)
Q Consensus       158 ~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~---~~~~~~~~~~-~~~~~~~--~~~~~~~i~v~D~a~  231 (305)
                      .|+.+|.++|.+++.++++++++++++||+++||+...+...   .....+.... .+....+  ++..++|+|++|+|+
T Consensus       142 ~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  221 (312)
T 2yy7_A          142 VYGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAID  221 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHH
Confidence            899999999999999988889999999999999987543321   2233333333 3432223  344899999999999


Q ss_pred             HHHHhhccccc----CceEEEecCCcCHHHHHHHHHHhCCCCCCCCCCCCCC--CCCCCcccchhHHHH-hCCCccc-cC
Q 039049          232 AHILAMEETRA----SGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQE--GDNSPHSMDTSKLFE-LGFVGFK-SV  303 (305)
Q Consensus       232 ~~~~~~~~~~~----~~~~~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-lg~~~~~-~l  303 (305)
                      +++.+++++..    ++.||++++.+|+.|+++.+.+.+|...++..+....  .......+|++|+++ ||| +|+ +|
T Consensus       222 a~~~~~~~~~~~~~~~~~~ni~~~~~s~~e~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~k~~~~lG~-~p~~~l  300 (312)
T 2yy7_A          222 ATINIMKAPVEKIKIHSSYNLAAMSFTPTEIANEIKKHIPEFTITYEPDFRQKIADSWPASIDDSQAREDWDW-KHTFDL  300 (312)
T ss_dssp             HHHHHHHSCGGGCCCSSCEECCSEEECHHHHHHHHHTTCTTCEEEECCCTHHHHHTTSCSSBCCHHHHHHHCC-CCCCCH
T ss_pred             HHHHHHhCcccccccCceEEeCCCccCHHHHHHHHHHHCCCCceEeccCccccccccccccCCHHHHHHHcCC-CCCCCH
Confidence            99999987654    3689998788999999999999998533322111000  012235789999999 999 998 77


Q ss_pred             CC
Q 039049          304 PQ  305 (305)
Q Consensus       304 ~e  305 (305)
                      +|
T Consensus       301 ~~  302 (312)
T 2yy7_A          301 ES  302 (312)
T ss_dssp             HH
T ss_pred             HH
Confidence            53

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=100.00  E-value=2.3e-43  Score=304.22  Aligned_cols=290  Identities=17%  Similarity=0.076  Sum_probs=224.5

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcC--CCEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQG--VDGVF   78 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~Vi   78 (305)
                      ||+||||||+||||++|++.|+++|++|++++|+...... ..+.... ...+++++.+|+.|.+.+.+++++  +|+||
T Consensus        14 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi   91 (335)
T 1rpn_A           14 TRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR-WRLRELG-IEGDIQYEDGDMADACSVQRAVIKAQPQEVY   91 (335)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC-HHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccc-cchhhcc-ccCceEEEECCCCCHHHHHHHHHHcCCCEEE
Confidence            5899999999999999999999999999999998754211 1111111 134789999999999999999874  79999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCc-cEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccch
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSV-KRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNL  157 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  157 (305)
                      |+|+......+...+...+++|+.++.+++++|++. ++ ++|||+||.++|+....    .+++|+++..|.      +
T Consensus        92 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~SS~~v~g~~~~----~~~~E~~~~~p~------~  160 (335)
T 1rpn_A           92 NLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQF-SPETRFYQASTSEMFGLIQA----ERQDENTPFYPR------S  160 (335)
T ss_dssp             ECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTSEEEEEEEGGGGCSCSS----SSBCTTSCCCCC------S
T ss_pred             ECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEEeCHHHhCCCCC----CCCCcccCCCCC------C
Confidence            999976532223456678999999999999999998 75 89999999998876432    578999888776      7


Q ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC--chHHHHHHHHhcCCCC--CC--CCCccceeHHHHHH
Q 039049          158 WYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPT--STLLLILAMVKGLRGE--YP--NTTVGFVHIDDVVG  231 (305)
Q Consensus       158 ~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~--~~--~~~~~~i~v~D~a~  231 (305)
                      .|+.+|.++|.+++.++++++++++++||+++|||+......  ....++.....+....  ++  +..++|+|++|+|+
T Consensus       161 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~  240 (335)
T 1rpn_A          161 PYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVE  240 (335)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHH
Confidence            899999999999999988889999999999999997543221  1233445555665332  33  34899999999999


Q ss_pred             HHHHhhcccccCceEEEe-cCCcCHHHHHHHHHHhCCCCC---CCCCC-CCCCCCCCCcccchhHHHH-hCCCccc-cCC
Q 039049          232 AHILAMEETRASGRLICS-SSVAHWSPIIEMLKATYPSYP---YESKC-SKQEGDNSPHSMDTSKLFE-LGFVGFK-SVP  304 (305)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~-lg~~~~~-~l~  304 (305)
                      +++.+++++. ++.||++ ++.+|+.|+++.+.+.+|...   ++... ..++.......+|++|+++ ||| +|+ +|+
T Consensus       241 a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~-~p~~~l~  318 (335)
T 1rpn_A          241 AMWLMLQQDK-ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLGW-KPRTSLD  318 (335)
T ss_dssp             HHHHHHHSSS-CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGCCSSCCCBCCBCTHHHHHHHCC-CCCSCHH
T ss_pred             HHHHHHhcCC-CCEEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccCCCcchhhcCCHHHHHHhcCC-CcCCCHH
Confidence            9999998765 4789995 568999999999999997531   11111 1123344567889999999 999 987 775


Q ss_pred             C
Q 039049          305 Q  305 (305)
Q Consensus       305 e  305 (305)
                      |
T Consensus       319 e  319 (335)
T 1rpn_A          319 E  319 (335)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=100.00  E-value=7.4e-44  Score=305.44  Aligned_cols=277  Identities=20%  Similarity=0.169  Sum_probs=215.8

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCccc-chhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLS-KVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFH   79 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~   79 (305)
                      ||+|||||||||||++|++.|+++|++|++++|+..... ....+... ....+++++.+|+.          ++|+|||
T Consensus         7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~----------~~d~vi~   75 (321)
T 3vps_A            7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKF-LEKPVLELEERDLS----------DVRLVYH   75 (321)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEE-ECSCGGGCCHHHHT----------TEEEEEE
T ss_pred             CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhh-ccCCCeeEEeCccc----------cCCEEEE
Confidence            468999999999999999999999999999999875211 00111110 01234566666665          7899999


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhH
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWY  159 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y  159 (305)
                      +|+..........+...++ |+.++.+++++|++. ++++|||+||.++|+...    ..+++|+++..|.      +.|
T Consensus        76 ~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~-~v~~~v~~SS~~v~~~~~----~~~~~E~~~~~p~------~~Y  143 (321)
T 3vps_A           76 LASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSV-GVPKVVVGSTCEVYGQAD----TLPTPEDSPLSPR------SPY  143 (321)
T ss_dssp             CCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCSCS----SSSBCTTSCCCCC------SHH
T ss_pred             CCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHc-CCCeEEEecCHHHhCCCC----CCCCCCCCCCCCC------Chh
Confidence            9998764323344455677 999999999999999 899999999999887653    2688999988876      889


Q ss_pred             HHHHHHHHHHHHHHHHHcCC-cEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCC-C--CCCCccceeHHHHHHHHHH
Q 039049          160 AYAKTIAEKEAWRIAKDCGI-DMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGE-Y--PNTTVGFVHIDDVVGAHIL  235 (305)
Q Consensus       160 ~~sK~~~E~~~~~~~~~~~~-~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~i~v~D~a~~~~~  235 (305)
                      +.+|+.+|.+++.++.++++ +++++||+++|||+... ......++.....+.+.. .  ++..++|+|++|+|++++.
T Consensus       144 ~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~  222 (321)
T 3vps_A          144 AASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERP-DALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVA  222 (321)
T ss_dssp             HHHHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCT-TSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCCC-CChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHH
Confidence            99999999999999988899 99999999999998654 233455666666666543 2  3348999999999999999


Q ss_pred             hhcccccCceEEEe-cCCcCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCcccchhHHHH-hCCCcc-c-cCC
Q 039049          236 AMEETRASGRLICS-SSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFE-LGFVGF-K-SVP  304 (305)
Q Consensus       236 ~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lg~~~~-~-~l~  304 (305)
                      +++++..+ .||++ ++.+|+.|+++.+. .+|...................+|++|+++ ||| +| + +|+
T Consensus       223 ~~~~~~~g-~~~i~~~~~~s~~e~~~~i~-~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~-~p~~~~~~  292 (321)
T 3vps_A          223 LANRPLPS-VVNFGSGQSLSVNDVIRILQ-ATSPAAEVARKQPRPNEITEFRADTALQTRQIGE-RSGGIGIE  292 (321)
T ss_dssp             GGGSCCCS-EEEESCSCCEEHHHHHHHHH-TTCTTCEEEEECCCTTCCSBCCBCCHHHHHHHCC-CSCCCCHH
T ss_pred             HHhcCCCC-eEEecCCCcccHHHHHHHHH-HhCCCCccccCCCCCCCcceeeccHHHHHHHhCC-CCCcCCHH
Confidence            99988776 99996 67899999999999 887532222222344566778999999999 999 99 4 765

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-43  Score=306.68  Aligned_cols=295  Identities=16%  Similarity=0.145  Sum_probs=218.5

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcC--CCEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQG--VDGVF   78 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~Vi   78 (305)
                      ||+||||||+||||++|++.|++.|++|++++|+...... .....+.. .++++++.+|+.|.+.+.+++++  +|+||
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~l~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   78 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGAT-DNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKYMPDSCF   78 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHH-HHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCch-hhhhhhcc-CCceEEEEcCCCCHHHHHHHHhccCCCEEE
Confidence            8999999999999999999999999999999986422111 01111111 23688999999999999999987  99999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCcc-EEEEeccceeeeccCCCC------------CCcccCCCC
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVK-RVVLTSSCSSIRYRHDAQ------------QVSPLNESH  145 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~SS~~~~~~~~~~~------------~~~~~~E~~  145 (305)
                      |+|+........+.+...+++|+.++.+++++|.+. +++ +|||+||.++|+.....+            ...+++|++
T Consensus        79 h~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~  157 (347)
T 1orr_A           79 HLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY-NSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDEST  157 (347)
T ss_dssp             ECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTS
T ss_pred             ECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccC
Confidence            999976532223456678999999999999999998 775 999999999887542210            002356666


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCC--CchHHHHHHHHhcC-----CCC-C-
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQP--TSTLLLILAMVKGL-----RGE-Y-  216 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~--~~~~~~~~~~~~~~-----~~~-~-  216 (305)
                      +..+.      +.|+.+|+++|.+++.++.+++++++++||+++||+......  .....++.....+.     +.. + 
T Consensus       158 ~~~~~------~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  231 (347)
T 1orr_A          158 QLDFH------SPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISG  231 (347)
T ss_dssp             CCCCC------HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEES
T ss_pred             CCCCC------CchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEec
Confidence            65554      889999999999999998888999999999999999764321  12334455555544     222 2 


Q ss_pred             -CCCCccceeHHHHHHHHHHhhccc--ccCceEEEecC---CcCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCcccchh
Q 039049          217 -PNTTVGFVHIDDVVGAHILAMEET--RASGRLICSSS---VAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTS  290 (305)
Q Consensus       217 -~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~~~~~~~---~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (305)
                       ++..++|+|++|+|++++.+++++  ..+..||+++.   .+|+.|+++.+.+.+|..........+........+|++
T Consensus       232 ~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~  311 (347)
T 1orr_A          232 NGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVRESDQRVFVADIK  311 (347)
T ss_dssp             SSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECCCSSCCSEECBCCH
T ss_pred             CCcceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCCceeCCCCCCCcceeecCHH
Confidence             344899999999999999999852  24558999753   499999999999998753111111123334456789999


Q ss_pred             HHHH-hCCCccc-cCCC
Q 039049          291 KLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       291 ~~~~-lg~~~~~-~l~e  305 (305)
                      |+++ ||| +|+ +|+|
T Consensus       312 k~~~~lG~-~p~~~~~e  327 (347)
T 1orr_A          312 KITNAIDW-SPKVSAKD  327 (347)
T ss_dssp             HHHHHHCC-CCCSCHHH
T ss_pred             HHHHHHCC-CccCCHHH
Confidence            9999 999 986 7653

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=100.00  E-value=5.8e-43  Score=303.25  Aligned_cols=289  Identities=19%  Similarity=0.224  Sum_probs=217.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCc-------ccchhhhhhccCccCceEEEEccCCCcchHHHHhc--
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPED-------LSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--   72 (305)
                      |+||||||+||||++|+++|++.|++|++++|+...       ......+....  ..+++++.+|+.|.+.+.++++  
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   80 (348)
T 1ek6_A            3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT--GRSVEFEEMDILDQGALQRLFKKY   80 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH--TCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhcc--CCceEEEECCCCCHHHHHHHHHhc
Confidence            689999999999999999999999999999986543       11111121111  2368899999999999999998  


Q ss_pred             CCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCc-cc
Q 039049           73 GVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDP-DY  151 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~-~~  151 (305)
                      ++|+|||+|+........+.+...+++|+.++.+++++|++. ++++|||+||.++|+...    ..+++|+++..| . 
T Consensus        81 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~~g~~~----~~~~~E~~~~~p~~-  154 (348)
T 1ek6_A           81 SFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-GVKNLVFSSSATVYGNPQ----YLPLDEAHPTGGCT-  154 (348)
T ss_dssp             CEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGGCSCS----SSSBCTTSCCCCCS-
T ss_pred             CCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHh-CCCEEEEECcHHHhCCCC----CCCcCCCCCCCCCC-
Confidence            899999999976432223455678999999999999999988 889999999999887532    268899988766 4 


Q ss_pred             ccccchhHHHHHHHHHHHHHHHHHH-cCCcEEEEecCceecCCCC------CC--CCchH-HHHHHHH-hcCCCC-----
Q 039049          152 CKHYNLWYAYAKTIAEKEAWRIAKD-CGIDMVVVNPSFVVGPLLA------PQ--PTSTL-LLILAMV-KGLRGE-----  215 (305)
Q Consensus       152 ~~~~~~~Y~~sK~~~E~~~~~~~~~-~~~~~~i~Rp~~v~G~~~~------~~--~~~~~-~~~~~~~-~~~~~~-----  215 (305)
                           +.|+.+|.++|.+++.++.+ .+++++++||+++|||...      ..  ..... .++.... .+..+.     
T Consensus       155 -----~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  229 (348)
T 1ek6_A          155 -----NPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGND  229 (348)
T ss_dssp             -----SHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSC
T ss_pred             -----CchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCc
Confidence                 78999999999999998877 2399999999999999531      10  12222 2333333 233221     


Q ss_pred             ----CCCCCccceeHHHHHHHHHHhhccc--ccC-ceEEEe-cCCcCHHHHHHHHHHhCCCCCCCCC-CCCCCCCCCCcc
Q 039049          216 ----YPNTTVGFVHIDDVVGAHILAMEET--RAS-GRLICS-SSVAHWSPIIEMLKATYPSYPYESK-CSKQEGDNSPHS  286 (305)
Q Consensus       216 ----~~~~~~~~i~v~D~a~~~~~~~~~~--~~~-~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~-~~~~~~~~~~~~  286 (305)
                          .++..++|+|++|+|++++.+++++  ..+ +.||++ ++.+|+.|+++.+.+.+|.. .+.. ............
T Consensus       230 ~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~  308 (348)
T 1ek6_A          230 YDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKK-IPYKVVARREGDVAACY  308 (348)
T ss_dssp             SSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSC-CCEEEECCCTTCCSEEC
T ss_pred             ccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCC-CceeeCCCCCccchhhc
Confidence                1234789999999999999999875  344 689995 67899999999999998752 2211 122333445678


Q ss_pred             cchhHHHH-hCCCccc-cCCC
Q 039049          287 MDTSKLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       287 ~~~~~~~~-lg~~~~~-~l~e  305 (305)
                      +|++|+++ ||| +|+ +|+|
T Consensus       309 ~d~~k~~~~lG~-~p~~~l~~  328 (348)
T 1ek6_A          309 ANPSLAQEELGW-TAALGLDR  328 (348)
T ss_dssp             BCCHHHHHTTCC-CCCCCHHH
T ss_pred             cCHHHHHHhcCC-CCCCCHHH
Confidence            99999999 999 987 7653

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=100.00  E-value=2.6e-43  Score=297.33  Aligned_cols=258  Identities=13%  Similarity=0.084  Sum_probs=206.4

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcC-CCEEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQG-VDGVFH   79 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-~d~Vi~   79 (305)
                      ||+||||| +||||++|++.|+++|++|++++|+.+..            ..+++++.+|+.|.+.+.+++++ +|+|||
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~------------~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih   69 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM------------PAGVQTLIADVTRPDTLASIVHLRPEILVY   69 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC------------CTTCCEEECCTTCGGGCTTGGGGCCSEEEE
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccCCceEEccCCChHHHHHhhcCCCCEEEE
Confidence            47899999 59999999999999999999999987642            23789999999999999999987 999999


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhH
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWY  159 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y  159 (305)
                      +|+...     ..+...+++|+.++.+++++|++. ++++|||+||.++|+...    ..+++|+++..|.      +.|
T Consensus        70 ~a~~~~-----~~~~~~~~~n~~~~~~ll~a~~~~-~~~~~v~~SS~~vyg~~~----~~~~~E~~~~~p~------~~Y  133 (286)
T 3gpi_A           70 CVAASE-----YSDEHYRLSYVEGLRNTLSALEGA-PLQHVFFVSSTGVYGQEV----EEWLDEDTPPIAK------DFS  133 (286)
T ss_dssp             CHHHHH-----HC-----CCSHHHHHHHHHHTTTS-CCCEEEEEEEGGGCCCCC----SSEECTTSCCCCC------SHH
T ss_pred             eCCCCC-----CCHHHHHHHHHHHHHHHHHHHhhC-CCCEEEEEcccEEEcCCC----CCCCCCCCCCCCC------Chh
Confidence            999743     345568899999999999999987 899999999999887653    2688999988877      889


Q ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhcc
Q 039049          160 AYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEE  239 (305)
Q Consensus       160 ~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  239 (305)
                      +.+|.++|.+ +.+     ++++++||+++||++..       .++..+........++..++|+|++|+|++++.++++
T Consensus       134 ~~sK~~~E~~-~~~-----~~~~ilR~~~v~G~~~~-------~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  200 (286)
T 3gpi_A          134 GKRMLEAEAL-LAA-----YSSTILRFSGIYGPGRL-------RMIRQAQTPEQWPARNAWTNRIHRDDGAAFIAYLIQQ  200 (286)
T ss_dssp             HHHHHHHHHH-GGG-----SSEEEEEECEEEBTTBC-------HHHHHTTCGGGSCSSBCEECEEEHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHH-Hhc-----CCeEEEecccccCCCch-------hHHHHHHhcccCCCcCceeEEEEHHHHHHHHHHHHhh
Confidence            9999999998 543     89999999999999753       1333333311112234488999999999999999998


Q ss_pred             c---ccCceEEEe-cCCcCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCcccchhHHHHhCCCccc--cCC
Q 039049          240 T---RASGRLICS-SSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELGFVGFK--SVP  304 (305)
Q Consensus       240 ~---~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~--~l~  304 (305)
                      +   ..++.||++ ++.+|+.|+++.+.+.+|........   +.......+|++|++.||| +|+  +|+
T Consensus       201 ~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~---~~~~~~~~~d~~k~~~lG~-~p~~~~l~  267 (286)
T 3gpi_A          201 RSHAVPERLYIVTDNQPLPVHDLLRWLADRQGIAYPAGAT---PPVQGNKKLSNARLLASGY-QLIYPDYV  267 (286)
T ss_dssp             HTTSCCCSEEEECCSCCEEHHHHHHHHHHHTTCCCCCSCC---CCBCSSCEECCHHHHHTTC-CCSSCSHH
T ss_pred             hccCCCCceEEEeCCCCCCHHHHHHHHHHHcCCCCCCCCC---cccCCCeEeeHHHHHHcCC-CCcCCcHH
Confidence            4   567789996 57899999999999999753222111   1456678899999977999 887  465

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=100.00  E-value=1.4e-43  Score=303.11  Aligned_cols=275  Identities=19%  Similarity=0.106  Sum_probs=213.4

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcC--CCEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQG--VDGVF   78 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~Vi   78 (305)
                      ||+|||||||||||++|+++|+++|+      +....             ...++++++|+.|.+.+.+++++  +|+||
T Consensus         6 ~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~-------------~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vi   66 (319)
T 4b8w_A            6 SMRILVTGGSGLVGKAIQKVVADGAG------LPGED-------------WVFVSSKDADLTDTAQTRALFEKVQPTHVI   66 (319)
T ss_dssp             CCEEEEETCSSHHHHHHHHHHHTTTC------CTTCE-------------EEECCTTTCCTTSHHHHHHHHHHSCCSEEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhcCC------ccccc-------------ccccCceecccCCHHHHHHHHhhcCCCEEE
Confidence            68999999999999999999999998      11110             11445567999999999999986  99999


Q ss_pred             EeccccccC-CCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCC----CCCccccc
Q 039049           79 HTASPVLVP-YDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH----WSDPDYCK  153 (305)
Q Consensus        79 ~~a~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~----~~~~~~~~  153 (305)
                      |+|+..... ...+.+...+++|+.++.+++++|++. ++++|||+||.++|+...    ..+++|++    ++.|.   
T Consensus        67 h~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~v~~SS~~vyg~~~----~~~~~E~~~~~~~~~p~---  138 (319)
T 4b8w_A           67 HLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEV-GARKVVSCLSTCIFPDKT----TYPIDETMIHNGPPHNS---  138 (319)
T ss_dssp             ECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEECCGGGSCSSC----CSSBCGGGGGBSCCCSS---
T ss_pred             ECceecccccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEEcchhhcCCCC----CCCccccccccCCCCCC---
Confidence            999986421 134456678999999999999999999 899999999999887643    26788887    44443   


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCC---CchHHHHHH----HHhcCCCC-CC--CCCccc
Q 039049          154 HYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQP---TSTLLLILA----MVKGLRGE-YP--NTTVGF  223 (305)
Q Consensus       154 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~---~~~~~~~~~----~~~~~~~~-~~--~~~~~~  223 (305)
                        ..+|+.+|+++|++++.++++++++++++||+++|||+.....   .....++..    ...+.++. .+  ...++|
T Consensus       139 --~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  216 (319)
T 4b8w_A          139 --NFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQF  216 (319)
T ss_dssp             --SHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECE
T ss_pred             --cchHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEE
Confidence              1359999999999999999889999999999999999875432   233344444    56666544 23  348999


Q ss_pred             eeHHHHHHHHHHhhccccc--CceEEEe-cCCcCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCcccchhHHHH-hCCCc
Q 039049          224 VHIDDVVGAHILAMEETRA--SGRLICS-SSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFE-LGFVG  299 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~~--~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lg~~~  299 (305)
                      +|++|+|++++.+++++..  ++.||++ ++.+|+.|+++.+.+.+|...................+|++|+++ ||| .
T Consensus       217 i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~-~  295 (319)
T 4b8w_A          217 IYSLDLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDTTKSDGQFKKTASNSKLRTYLPD-F  295 (319)
T ss_dssp             EEHHHHHHHHHHHHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCSCEEEETTSCCCCSCCCBCCHHHHHHCTT-C
T ss_pred             EeHHHHHHHHHHHHhccccCCceEEEecCCCceeHHHHHHHHHHHhCCCCcEEeCCCCCcCcccccCCHHHHHHhcCC-C
Confidence            9999999999999988543  4579985 689999999999999997532222222234455667899999999 999 8


Q ss_pred             cc-cCCC
Q 039049          300 FK-SVPQ  305 (305)
Q Consensus       300 ~~-~l~e  305 (305)
                      |. +|+|
T Consensus       296 p~~~~~~  302 (319)
T 4b8w_A          296 RFTPFKQ  302 (319)
T ss_dssp             CCCCHHH
T ss_pred             CCCCHHH
Confidence            86 7653

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=100.00  E-value=3.1e-42  Score=297.96  Aligned_cols=282  Identities=19%  Similarity=0.254  Sum_probs=212.3

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ||+||||||+||||++|+++|+++|++|++++|++.+.....        ..+++++.+|+.|.+.+.++++++|+|||+
T Consensus        13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~--------~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   84 (342)
T 2x4g_A           13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLA--------YLEPECRVAEMLDHAGLERALRGLDGVIFS   84 (342)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGG--------GGCCEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhc--------cCCeEEEEecCCCHHHHHHHHcCCCEEEEC
Confidence            468999999999999999999999999999999876433211        126889999999999999999999999999


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHH
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYA  160 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  160 (305)
                      |+....  +.+.+...+++|+.++.+++++|.+. ++++|||+||.++|+.....  ..+ +|+++..|...  ..+.|+
T Consensus        85 a~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~~--~~~-~E~~~~~p~~~--~~~~Y~  156 (342)
T 2x4g_A           85 AGYYPS--RPRRWQEEVASALGQTNPFYAACLQA-RVPRILYVGSAYAMPRHPQG--LPG-HEGLFYDSLPS--GKSSYV  156 (342)
T ss_dssp             --------------CHHHHHHHHHHHHHHHHHHH-TCSCEEEECCGGGSCCCTTS--SCB-CTTCCCSSCCT--TSCHHH
T ss_pred             CccCcC--CCCCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEECCHHhhCcCCCC--CCC-CCCCCCCcccc--ccChHH
Confidence            997652  34566778999999999999999998 88999999999988764321  134 88888777110  017899


Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEEEecCceecCCC-CCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhcc
Q 039049          161 YAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLL-APQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEE  239 (305)
Q Consensus       161 ~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  239 (305)
                      .+|+++|.+++.+++. +++++++||+.+||+.. .+.   ...++.....+....+++..++|+|++|+|++++.++++
T Consensus       157 ~sK~~~e~~~~~~~~~-g~~~~ilrp~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  232 (342)
T 2x4g_A          157 LCKWALDEQAREQARN-GLPVVIGIPGMVLGELDIGPT---TGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALER  232 (342)
T ss_dssp             HHHHHHHHHHHHHHHT-TCCEEEEEECEEECSCCSSCS---TTHHHHHHHTTCCCEEECCEEEEEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhc-CCcEEEEeCCceECCCCcccc---HHHHHHHHHcCCCccccCCCcceeeHHHHHHHHHHHHhC
Confidence            9999999999998876 99999999999999976 321   333555566665543456688999999999999999988


Q ss_pred             cccCceEEEe-cCCcCHHHHHHHHHHhCCCCC---CCCCC---------------C-------C-CCCCCCCcccchhHH
Q 039049          240 TRASGRLICS-SSVAHWSPIIEMLKATYPSYP---YESKC---------------S-------K-QEGDNSPHSMDTSKL  292 (305)
Q Consensus       240 ~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~---~~~~~---------------~-------~-~~~~~~~~~~~~~~~  292 (305)
                      +..++.||++ +. +|+.|+++.+.+.+|...   +|...               .       . .........+|++|+
T Consensus       233 ~~~g~~~~v~~~~-~s~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~  311 (342)
T 2x4g_A          233 GRIGERYLLTGHN-LEMADLTRRIAELLGQPAPQPMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKA  311 (342)
T ss_dssp             SCTTCEEEECCEE-EEHHHHHHHHHHHHTCCCCEEECHHHHHHHHHHHHC----------------CCTTCCCCBCCHHH
T ss_pred             CCCCceEEEcCCc-ccHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHhcCcccChHHH
Confidence            7667789996 56 999999999999987531   12110               0       0 011134678999999


Q ss_pred             HH-hCC-CccccCC
Q 039049          293 FE-LGF-VGFKSVP  304 (305)
Q Consensus       293 ~~-lg~-~~~~~l~  304 (305)
                      ++ ||| .. ++|+
T Consensus       312 ~~~lG~~~p-~~~~  324 (342)
T 2x4g_A          312 REELGFFST-TALD  324 (342)
T ss_dssp             HHHHCCCCC-SCHH
T ss_pred             HHhCCCCCC-CCHH
Confidence            99 999 43 4443

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=100.00  E-value=1.9e-42  Score=299.55  Aligned_cols=290  Identities=17%  Similarity=0.209  Sum_probs=218.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHc-CCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCc-chHHHHhcCCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDK-GHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME-GSFDEAIQGVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~~~d~Vi~   79 (305)
                      |+||||||+||||++|+++|++. |++|++++|+..+....   .    ...+++++++|+.|. +.+.++++++|+|||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~---~----~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih   73 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF---L----NHPHFHFVEGDISIHSEWIEYHVKKCDVVLP   73 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGG---T----TCTTEEEEECCTTTCSHHHHHHHHHCSEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHh---h----cCCCeEEEeccccCcHHHHHhhccCCCEEEE
Confidence            58999999999999999999998 89999999987543221   1    123789999999985 568888889999999


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCccccc-ccchh
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCK-HYNLW  158 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~-~~~~~  158 (305)
                      +|+...+......+...+++|+.++.+++++|++. + ++|||+||.++|+....    .+++|+++..+..+. .+.+.
T Consensus        74 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~v~~SS~~v~g~~~~----~~~~e~~~~~~~~~~~~~~~~  147 (345)
T 2bll_A           74 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPSTSEVYGMCSD----KYFDEDHSNLIVGPVNKPRWI  147 (345)
T ss_dssp             CBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECCGGGGBTCCC----SSBCTTTCCCBCCCTTCGGGH
T ss_pred             cccccCccchhcCHHHHHHHHHHHHHHHHHHHHHh-C-CeEEEEecHHHcCCCCC----CCcCCcccccccCcccCcccc
Confidence            99976532223455668899999999999999998 7 89999999998876432    567787764221111 11267


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCC-------CCchHHHHHHHHhcCCCC-C--CCCCccceeHHH
Q 039049          159 YAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQ-------PTSTLLLILAMVKGLRGE-Y--PNTTVGFVHIDD  228 (305)
Q Consensus       159 Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~-~--~~~~~~~i~v~D  228 (305)
                      |+.+|..+|.+++.++++++++++++||+++|||+....       ......++..+..+.+.. .  ++..++|+|++|
T Consensus       148 Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D  227 (345)
T 2bll_A          148 YSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRD  227 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHH
T ss_pred             cHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHH
Confidence            999999999999999888899999999999999986431       112345566666676543 2  334789999999


Q ss_pred             HHHHHHHhhcccc---cCceEEEec-C-CcCHHHHHHHHHHhCCCCC----CCCCCC-----------CCCCCCCCcccc
Q 039049          229 VVGAHILAMEETR---ASGRLICSS-S-VAHWSPIIEMLKATYPSYP----YESKCS-----------KQEGDNSPHSMD  288 (305)
Q Consensus       229 ~a~~~~~~~~~~~---~~~~~~~~~-~-~~s~~el~~~i~~~~~~~~----~~~~~~-----------~~~~~~~~~~~~  288 (305)
                      +|++++.+++++.   .++.||+++ + .+|+.|+++.+.+.+|...    .|....           ..........+|
T Consensus       228 va~a~~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  307 (345)
T 2bll_A          228 GIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPS  307 (345)
T ss_dssp             HHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------CCCCCBC
T ss_pred             HHHHHHHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcccccCccccccccccchhhccccccchhhhccc
Confidence            9999999998764   356899975 4 7999999999999886432    111110           001223557889


Q ss_pred             hhHHHH-hCCCccc-cCCC
Q 039049          289 TSKLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       289 ~~~~~~-lg~~~~~-~l~e  305 (305)
                      ++|+++ ||| +|+ +|+|
T Consensus       308 ~~k~~~~lG~-~p~~~l~~  325 (345)
T 2bll_A          308 IRNAHRCLDW-EPKIDMQE  325 (345)
T ss_dssp             CHHHHHHHCC-CCCCCHHH
T ss_pred             HHHHHHhcCC-CccccHHH
Confidence            999999 999 987 7653

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=100.00  E-value=1.3e-42  Score=307.00  Aligned_cols=290  Identities=16%  Similarity=0.114  Sum_probs=214.9

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccc--------------hhhhhhc-cCccCceEEEEccCCCcc
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSK--------------VGFLWEL-NGAEERLKIMKADLLMEG   65 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~--------------~~~~~~~-~~~~~~~~~~~~D~~d~~   65 (305)
                      |++||||||+||||++|++.|+++|++|++++|.......              ...+... .....+++++.+|+.|.+
T Consensus        11 ~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~~   90 (404)
T 1i24_A           11 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   90 (404)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCHH
Confidence            6899999999999999999999999999999886432110              0001000 001247899999999999


Q ss_pred             hHHHHhcC--CCEEEEeccccccCCCCch---hhhhhhhhHHHHHHHHHHHHhcCCc-cEEEEeccceeeeccCCCCCCc
Q 039049           66 SFDEAIQG--VDGVFHTASPVLVPYDNNI---QATLIDPCIKGTLNVLSSCKKAKSV-KRVVLTSSCSSIRYRHDAQQVS  139 (305)
Q Consensus        66 ~~~~~~~~--~d~Vi~~a~~~~~~~~~~~---~~~~~~~n~~~~~~l~~~~~~~~~~-~~~v~~SS~~~~~~~~~~~~~~  139 (305)
                      .+.+++++  +|+|||+||..........   +...+++|+.++.+++++|++. ++ ++|||+||.++|+...     .
T Consensus        91 ~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~~~~~V~~SS~~vyg~~~-----~  164 (404)
T 1i24_A           91 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF-GEECHLVKLGTMGEYGTPN-----I  164 (404)
T ss_dssp             HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEECCGGGGCCCS-----S
T ss_pred             HHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHh-CCCcEEEEeCcHHHhCCCC-----C
Confidence            99999986  9999999997653211112   2347899999999999999988 76 5999999999886532     3


Q ss_pred             ccCCCC--------------CCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCC--------
Q 039049          140 PLNESH--------------WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQ--------  197 (305)
Q Consensus       140 ~~~E~~--------------~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~--------  197 (305)
                      +++|+.              +..|.      +.|+.+|+++|.+++.++.+++++++++||+++|||+....        
T Consensus       165 ~~~E~~~~~~~~~~~~~~~~~~~~~------~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~  238 (404)
T 1i24_A          165 DIEEGYITITHNGRTDTLPYPKQAS------SFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRN  238 (404)
T ss_dssp             CBCSSEEEEEETTEEEEEECCCCCC------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCC
T ss_pred             CCCccccccccccccccccCCCCCC------ChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCcccccccccc
Confidence            555542              33333      78999999999999999888899999999999999986421        


Q ss_pred             --------CCchHHHHHHHHhcCCCC-CCC--CCccceeHHHHHHHHHHhhccccc-C--ceEEEecCCcCHHHHHHHHH
Q 039049          198 --------PTSTLLLILAMVKGLRGE-YPN--TTVGFVHIDDVVGAHILAMEETRA-S--GRLICSSSVAHWSPIIEMLK  263 (305)
Q Consensus       198 --------~~~~~~~~~~~~~~~~~~-~~~--~~~~~i~v~D~a~~~~~~~~~~~~-~--~~~~~~~~~~s~~el~~~i~  263 (305)
                              ......++..+..+.++. +++  ..++|+|++|+|++++.+++++.. +  ..||++++.+|+.|+++.+.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~~~~s~~e~~~~i~  318 (404)
T 1i24_A          239 RLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVT  318 (404)
T ss_dssp             CCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHH
T ss_pred             ccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECCCCCcHHHHHHHHH
Confidence                    133456677777776653 343  479999999999999999988654 4  47999768899999999999


Q ss_pred             Hh---CCCCCCCC-CCCCCC--CCCCCcccchhHHHHhCCCccc-cCC
Q 039049          264 AT---YPSYPYES-KCSKQE--GDNSPHSMDTSKLFELGFVGFK-SVP  304 (305)
Q Consensus       264 ~~---~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~lg~~~~~-~l~  304 (305)
                      +.   +|.. .+. ......  .......+|++|+++||| +|+ +++
T Consensus       319 ~~~~~~g~~-~~~~~~p~~~~~~~~~~~~~d~~k~~~LG~-~p~~~~~  364 (404)
T 1i24_A          319 KAGSKLGLD-VKKMTVPNPRVEAEEHYYNAKHTKLMELGL-EPHYLSD  364 (404)
T ss_dssp             HHHHTTTCC-CCEEEECCSSCSCSSCCCCBCCCHHHHTTC-CCCCCCH
T ss_pred             HHHHhhCCC-ccccccCcccCccccceEecCHHHHHHcCC-CcCcCHH
Confidence            98   5532 211 111111  123356789999977999 998 664

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=100.00  E-value=3.3e-42  Score=303.72  Aligned_cols=295  Identities=22%  Similarity=0.268  Sum_probs=218.6

Q ss_pred             CCcEEEeCCcchHHHHHHHHHH-HcCCeEEEEEeCCCcc---------cchhh-hhhccCc--cCc---eEEEEccCCCc
Q 039049            1 MPEYCVTGGTGFIAAHLVKALL-DKGHMVRTTVRDPEDL---------SKVGF-LWELNGA--EER---LKIMKADLLME   64 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~-~~g~~V~~~~r~~~~~---------~~~~~-~~~~~~~--~~~---~~~~~~D~~d~   64 (305)
                      +|+||||||+||||++|++.|+ +.|++|++++|+....         ..... +......  ..+   ++++.+|+.|+
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            3689999999999999999999 9999999999976532         11100 1111110  124   88999999999


Q ss_pred             chHHHHhc--C-CCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCC---CCCC
Q 039049           65 GSFDEAIQ--G-VDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHD---AQQV  138 (305)
Q Consensus        65 ~~~~~~~~--~-~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~---~~~~  138 (305)
                      +.+.++++  + +|+|||+|+......+.+.+...+++|+.++.+++++|++. ++++|||+||.++|+....   ....
T Consensus        82 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~~iv~~SS~~v~g~~~~~~~~~~~  160 (397)
T 1gy8_A           82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-KCDKIIFSSSAAIFGNPTMGSVSTNA  160 (397)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGTBSCCC-----CC
T ss_pred             HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHh-CCCEEEEECCHHHhCCCCcccccccc
Confidence            99999887  6 99999999986532223456678999999999999999998 8899999999998765431   0002


Q ss_pred             cccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCC-------CCchHHHHH-----
Q 039049          139 SPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQ-------PTSTLLLIL-----  206 (305)
Q Consensus       139 ~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~-------~~~~~~~~~-----  206 (305)
                      .+++|+++..|.      +.|+.+|.++|.+++.++.+++++++++||+++|||.....       .......+.     
T Consensus       161 ~~~~E~~~~~p~------~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~  234 (397)
T 1gy8_A          161 EPIDINAKKSPE------SPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMS  234 (397)
T ss_dssp             CCBCTTSCCBCS------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHH
T ss_pred             cCcCccCCCCCC------CchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHH
Confidence            578898887665      78999999999999999888899999999999999974211       122222222     


Q ss_pred             HHHhcCC------------CC---------CCCCCccceeHHHHHHHHHHhhccccc------C---ceEEEe-cCCcCH
Q 039049          207 AMVKGLR------------GE---------YPNTTVGFVHIDDVVGAHILAMEETRA------S---GRLICS-SSVAHW  255 (305)
Q Consensus       207 ~~~~~~~------------~~---------~~~~~~~~i~v~D~a~~~~~~~~~~~~------~---~~~~~~-~~~~s~  255 (305)
                      .+..+..            +.         .++..++|||++|+|++++.+++++..      +   +.||++ ++.+|+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~  314 (397)
T 1gy8_A          235 DIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSV  314 (397)
T ss_dssp             HHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEH
T ss_pred             HHHhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccH
Confidence            3333332            11         123478999999999999999986542      2   689995 678999


Q ss_pred             HHHHHHHHHhCCCCCCCCC-CCCCCCCCCCcccchhHHHH-hCCCccc--cCC
Q 039049          256 SPIIEMLKATYPSYPYESK-CSKQEGDNSPHSMDTSKLFE-LGFVGFK--SVP  304 (305)
Q Consensus       256 ~el~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-lg~~~~~--~l~  304 (305)
                      .|+++.+.+.+|.. .+.. ............+|++|+++ ||| +|+  +|+
T Consensus       315 ~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~d~~k~~~~lG~-~p~~~~l~  365 (397)
T 1gy8_A          315 REVIEVARKTTGHP-IPVRECGRREGDPAYLVAASDKAREVLGW-KPKYDTLE  365 (397)
T ss_dssp             HHHHHHHHHHHCCC-CCEEEECCCTTCCSEECBCCHHHHHHTCC-CCSCCSHH
T ss_pred             HHHHHHHHHHhCCC-CCeeeCCCCCCcccccccCHHHHHHHhCC-CCCcCCHH
Confidence            99999999998752 2211 12233445568899999999 999 887  554

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=100.00  E-value=2.4e-41  Score=292.52  Aligned_cols=288  Identities=21%  Similarity=0.245  Sum_probs=214.8

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ||+||||||+||||++|++.|++.|++|++++|+......  .+.... ...++.++.+|+.+..     +.++|+|||+
T Consensus        27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~-~~~~~~~~~~D~~~~~-----~~~~d~vih~   98 (343)
T 2b69_A           27 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKR--NVEHWI-GHENFELINHDVVEPL-----YIEVDQIYHL   98 (343)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG--GTGGGT-TCTTEEEEECCTTSCC-----CCCCSEEEEC
T ss_pred             CCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchh--hhhhhc-cCCceEEEeCccCChh-----hcCCCEEEEC
Confidence            5789999999999999999999999999999997543221  111111 1347899999998853     5689999999


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHH
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYA  160 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  160 (305)
                      |+......+...+...+++|+.++.+++++|++. ++ +|||+||.++|+...    ..+++|+.+...... .+.+.|+
T Consensus        99 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v~g~~~----~~~~~E~~~~~~~~~-~~~~~Y~  171 (343)
T 2b69_A           99 ASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-GA-RLLLASTSEVYGDPE----VHPQSEDYWGHVNPI-GPRACYD  171 (343)
T ss_dssp             CSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TC-EEEEEEEGGGGBSCS----SSSBCTTCCCBCCSS-STTHHHH
T ss_pred             ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CC-cEEEECcHHHhCCCC----CCCCcccccccCCCC-CCCCchH
Confidence            9976533223345668899999999999999998 75 999999999887543    256777743211110 1127899


Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCC-CCchHHHHHHHHhcCCCC-CC--CCCccceeHHHHHHHHHHh
Q 039049          161 YAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQ-PTSTLLLILAMVKGLRGE-YP--NTTVGFVHIDDVVGAHILA  236 (305)
Q Consensus       161 ~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~-~~--~~~~~~i~v~D~a~~~~~~  236 (305)
                      .+|.++|.+++.++++++++++++||+++|||+.... ......++.....+.+.. ++  +..++|+|++|+|++++.+
T Consensus       172 ~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~  251 (343)
T 2b69_A          172 EGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVAL  251 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHH
Confidence            9999999999998888899999999999999986543 223345566666666543 33  3478999999999999999


Q ss_pred             hcccccCceEEEe-cCCcCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCcccchhHHHH-hCCCccc-cCCC
Q 039049          237 MEETRASGRLICS-SSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       237 ~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lg~~~~~-~l~e  305 (305)
                      ++.+ .++.||++ ++.+|+.|+++.+.+.+|...................+|++|+++ ||| +|+ +|+|
T Consensus       252 ~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~~~~~~~~d~~k~~~~lG~-~p~~~l~e  321 (343)
T 2b69_A          252 MNSN-VSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGW-EPVVPLEE  321 (343)
T ss_dssp             HTSS-CCSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEECCCTTCCCCCCBCCHHHHHHHCC-CCCSCHHH
T ss_pred             HhcC-CCCeEEecCCCCCcHHHHHHHHHHHhCCCCCceeCCCCCCCCceecCCHHHHHHHcCC-CCCCCHHH
Confidence            9865 36789996 578999999999999997532111111122334567889999999 999 886 7653

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=6.4e-42  Score=299.64  Aligned_cols=291  Identities=16%  Similarity=0.087  Sum_probs=220.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCccc--chhhhhhccC--ccCceEEEEccCCCcchHHHHhcC--CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLS--KVGFLWELNG--AEERLKIMKADLLMEGSFDEAIQG--VD   75 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~--~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~--~d   75 (305)
                      |+||||||+||||++|++.|+++|++|++++|++....  ....+.....  ...+++++.+|+.|.+.+.+++++  +|
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  104 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPT  104 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCC
Confidence            78999999999999999999999999999999865321  1111100000  124788999999999999999874  79


Q ss_pred             EEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCc---cEEEEeccceeeeccCCCCCCcccCCCCCCCcccc
Q 039049           76 GVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSV---KRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYC  152 (305)
Q Consensus        76 ~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~  152 (305)
                      +|||+|+......+.+.+...+++|+.++.+++++|.+. ++   ++|||+||.++|+...    ..+++|+++..|.  
T Consensus       105 ~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~~~~iv~~SS~~~~~~~~----~~~~~E~~~~~~~--  177 (375)
T 1t2a_A          105 EIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTC-GLINSVKFYQASTSELYGKVQ----EIPQKETTPFYPR--  177 (375)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEEEEEEEGGGTCSCS----SSSBCTTSCCCCC--
T ss_pred             EEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHh-CCCccceEEEecchhhhCCCC----CCCCCccCCCCCC--
Confidence            999999986532223456678999999999999999988 77   7999999999887543    2578999887765  


Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC--chHHHHHHHHhcCCC--CCC--CCCccceeH
Q 039049          153 KHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPT--STLLLILAMVKGLRG--EYP--NTTVGFVHI  226 (305)
Q Consensus       153 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~--~~~--~~~~~~i~v  226 (305)
                          +.|+.+|.++|.+++.++.+++++++++||+++|||+......  ....++..+..+...  .++  +..++|+|+
T Consensus       178 ----~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v  253 (375)
T 1t2a_A          178 ----SPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHA  253 (375)
T ss_dssp             ----SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEH
T ss_pred             ----ChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEH
Confidence                7899999999999999988889999999999999997543211  112344455556432  233  448999999


Q ss_pred             HHHHHHHHHhhcccccCceEEEe-cCCcCHHHHHHHHHHhCCCCC------CCCC--------------C-CCCCCCCCC
Q 039049          227 DDVVGAHILAMEETRASGRLICS-SSVAHWSPIIEMLKATYPSYP------YESK--------------C-SKQEGDNSP  284 (305)
Q Consensus       227 ~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~------~~~~--------------~-~~~~~~~~~  284 (305)
                      +|+|++++.+++++. .+.||++ ++.+|+.|+++.+.+.+|...      +|..              . ..++.....
T Consensus       254 ~Dva~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (375)
T 1t2a_A          254 KDYVEAMWLMLQNDE-PEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDF  332 (375)
T ss_dssp             HHHHHHHHHHHHSSS-CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCB
T ss_pred             HHHHHHHHHHHhcCC-CceEEEeCCCcccHHHHHHHHHHHhCCCcccccccccccccccccccceeecCcccCCcccchh
Confidence            999999999998765 4789985 678999999999999997531      1110              0 012233445


Q ss_pred             cccchhHHHH-hCCCccc-cCCC
Q 039049          285 HSMDTSKLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       285 ~~~~~~~~~~-lg~~~~~-~l~e  305 (305)
                      ..+|++|+++ ||| +|+ +|+|
T Consensus       333 ~~~d~~k~~~~lG~-~p~~~l~e  354 (375)
T 1t2a_A          333 LQGDCTKAKQKLNW-KPRVAFDE  354 (375)
T ss_dssp             CCBCCHHHHHHHCC-CCCSCHHH
T ss_pred             hcCCHHHHHHhcCC-CccCCHHH
Confidence            7789999999 999 997 7753

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=100.00  E-value=3e-42  Score=300.23  Aligned_cols=294  Identities=18%  Similarity=0.213  Sum_probs=220.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHc-CCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDK-GHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi   78 (305)
                      |+||||||+||||++|++.|++. |++|++++|+..... ...+.... ...+++++.+|+.|.+.+.++++  ++|+||
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   78 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN-LESLSDIS-ESNRYNFEHADICDSAEITRIFEQYQPDAVM   78 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCC-GGGGTTTT-TCTTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCc-hhhhhhhh-cCCCeEEEECCCCCHHHHHHHHhhcCCCEEE
Confidence            47999999999999999999998 799999999752111 11111111 13478999999999999999998  899999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcC-Ccc-------EEEEeccceeeeccCCC------CCCcccCCC
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAK-SVK-------RVVLTSSCSSIRYRHDA------QQVSPLNES  144 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~-------~~v~~SS~~~~~~~~~~------~~~~~~~E~  144 (305)
                      |+|+......+.+.+...+++|+.++.+++++|.+.. +++       +|||+||.++|+.....      ....+++|+
T Consensus        79 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~  158 (361)
T 1kew_A           79 HLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTET  158 (361)
T ss_dssp             ECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTT
T ss_pred             ECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCC
Confidence            9999865322234556789999999999999998751 445       99999999988754210      000177888


Q ss_pred             CCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCC-CC--CCCc
Q 039049          145 HWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGE-YP--NTTV  221 (305)
Q Consensus       145 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~  221 (305)
                      ++..+.      +.|+.+|.++|.+++.++.+++++++++||+++||+...+. .....++..+..+.+.. ++  ...+
T Consensus       159 ~~~~~~------~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (361)
T 1kew_A          159 TAYAPS------SPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQIR  231 (361)
T ss_dssp             SCCCCC------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHHTCCEEEETTSCCEE
T ss_pred             CCCCCC------CccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcc-cHHHHHHHHHHcCCCceEcCCCceeE
Confidence            877665      78999999999999999888899999999999999986432 23344556666665433 23  3478


Q ss_pred             cceeHHHHHHHHHHhhcccccCceEEEe-cCCcCHHHHHHHHHHhCCCC-CC--C-----CCCCCCCCCCCCcccchhHH
Q 039049          222 GFVHIDDVVGAHILAMEETRASGRLICS-SSVAHWSPIIEMLKATYPSY-PY--E-----SKCSKQEGDNSPHSMDTSKL  292 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~-~~--~-----~~~~~~~~~~~~~~~~~~~~  292 (305)
                      +|+|++|+|++++.+++.+..++.||++ +..+|+.|+++.+.+.+|.. +.  |     .....+......+.+|++|+
T Consensus       232 ~~i~v~Dva~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~d~~k~  311 (361)
T 1kew_A          232 DWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKI  311 (361)
T ss_dssp             EEEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCBCCBCCHHH
T ss_pred             eeEEHHHHHHHHHHHHhCCCCCCEEEecCCCeeeHHHHHHHHHHHhCCcCccccccccceeecCCCCcccceeecCHHHH
Confidence            9999999999999999877667789996 46799999999999987532 11  1     01111222334568999999


Q ss_pred             HH-hCCCccc-cCCC
Q 039049          293 FE-LGFVGFK-SVPQ  305 (305)
Q Consensus       293 ~~-lg~~~~~-~l~e  305 (305)
                      ++ ||| +|+ +|+|
T Consensus       312 ~~~lG~-~p~~~~~e  325 (361)
T 1kew_A          312 SRELGW-KPLETFES  325 (361)
T ss_dssp             HHHHCC-CCSCCHHH
T ss_pred             HHHhCC-CCccCHHH
Confidence            99 999 987 7653

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=100.00  E-value=1.9e-41  Score=292.64  Aligned_cols=289  Identities=20%  Similarity=0.226  Sum_probs=213.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCccc-chhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLS-KVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi   78 (305)
                      |+||||||+||||++++++|+++|++|++++|...... ....+....  ..+++++.+|+.|++.+.++++  ++|+||
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vi   78 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG--GKHPTFVEGDIRNEALMTEILHDHAIDTVI   78 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH--TSCCEEEECCTTCHHHHHHHHHHTTCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhc--CCcceEEEccCCCHHHHHHHhhccCCCEEE
Confidence            57999999999999999999999999999987543211 111111111  2367899999999999998886  599999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCc-ccccccch
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDP-DYCKHYNL  157 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~-~~~~~~~~  157 (305)
                      |+||........+.+...+++|+.++.++++++++. ++++|||+||.++|+...    ..+++|+++..| .      +
T Consensus        79 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~~g~~~----~~~~~e~~~~~~~~------~  147 (338)
T 1udb_A           79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNFIFSSSATVYGDNP----KIPYVESFPTGTPQ------S  147 (338)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCSCC----SSSBCTTSCCCCCS------S
T ss_pred             ECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEEccHHHhCCCC----CCCcCcccCCCCCC------C
Confidence            999975432122345568899999999999999988 889999999999876532    257888877644 3      7


Q ss_pred             hHHHHHHHHHHHHHHHHHHc-CCcEEEEecCceecCCCC------CC--CCchHHHHHHHHhc--CCC-------C--CC
Q 039049          158 WYAYAKTIAEKEAWRIAKDC-GIDMVVVNPSFVVGPLLA------PQ--PTSTLLLILAMVKG--LRG-------E--YP  217 (305)
Q Consensus       158 ~Y~~sK~~~E~~~~~~~~~~-~~~~~i~Rp~~v~G~~~~------~~--~~~~~~~~~~~~~~--~~~-------~--~~  217 (305)
                      .|+.+|.++|.+++.++.++ +++++++||+++||+...      +.  .......+.....+  ..+       .  .+
T Consensus       148 ~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g  227 (338)
T 1udb_A          148 PYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDG  227 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSS
T ss_pred             hHHHHHHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCC
Confidence            79999999999999998776 899999999999998531      11  12222333333332  211       1  12


Q ss_pred             CCCccceeHHHHHHHHHHhhcccc--cC-ceEEEe-cCCcCHHHHHHHHHHhCCCCCCCCC-CCCCCCCCCCcccchhHH
Q 039049          218 NTTVGFVHIDDVVGAHILAMEETR--AS-GRLICS-SSVAHWSPIIEMLKATYPSYPYESK-CSKQEGDNSPHSMDTSKL  292 (305)
Q Consensus       218 ~~~~~~i~v~D~a~~~~~~~~~~~--~~-~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  292 (305)
                      .+.++|||++|+|++++.++++..  .+ +.||++ ++.+|+.|+++.+.+.+|.. .+.. ............+|++|+
T Consensus       228 ~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~d~~k~  306 (338)
T 1udb_A          228 TGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKP-VNYHFAPRREGDLPAYWADASKA  306 (338)
T ss_dssp             SCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSC-CCEEEECCCTTCCSBCCBCCHHH
T ss_pred             ceeeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCC-CcceeCCCCCCchhhhhcCHHHH
Confidence            347899999999999999997642  32 579995 67899999999999998642 2211 122333445678899999


Q ss_pred             HH-hCCCccc-cCCC
Q 039049          293 FE-LGFVGFK-SVPQ  305 (305)
Q Consensus       293 ~~-lg~~~~~-~l~e  305 (305)
                      ++ ||| +|+ +|+|
T Consensus       307 ~~~lG~-~p~~~l~~  320 (338)
T 1udb_A          307 DRELNW-RVTRTLDE  320 (338)
T ss_dssp             HHHHCC-CCCCCHHH
T ss_pred             HHHcCC-CcCCCHHH
Confidence            99 999 987 7653

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=100.00  E-value=9.1e-43  Score=294.17  Aligned_cols=261  Identities=13%  Similarity=0.046  Sum_probs=211.1

Q ss_pred             CC-cEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEE
Q 039049            1 MP-EYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGV   77 (305)
Q Consensus         1 m~-~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~V   77 (305)
                      |+ +||||||+||||++|++.|+++|++|++++|.                       ++|+.|.+.+.++++  ++|+|
T Consensus         4 M~m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~D~~d~~~~~~~~~~~~~d~v   60 (287)
T 3sc6_A            4 MKERVIITGANGQLGKQLQEELNPEEYDIYPFDKK-----------------------LLDITNISQVQQVVQEIRPHII   60 (287)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT-----------------------TSCTTCHHHHHHHHHHHCCSEE
T ss_pred             ceeEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc-----------------------ccCCCCHHHHHHHHHhcCCCEE
Confidence            66 89999999999999999999999999999882                       269999999999998  79999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccch
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNL  157 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  157 (305)
                      ||+|+......+.+.+...+++|+.++.+++++|++. ++ ||||+||.++|++..    ..+++|+++..|.      +
T Consensus        61 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~v~~SS~~vy~~~~----~~~~~E~~~~~p~------~  128 (287)
T 3sc6_A           61 IHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLV-GA-KLVYISTDYVFQGDR----PEGYDEFHNPAPI------N  128 (287)
T ss_dssp             EECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGSCCCC----SSCBCTTSCCCCC------S
T ss_pred             EECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEchhhhcCCCC----CCCCCCCCCCCCC------C
Confidence            9999987654334567779999999999999999998 76 799999999887643    2689999988877      8


Q ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCC-CCCCCccceeHHHHHHHHHHh
Q 039049          158 WYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGE-YPNTTVGFVHIDDVVGAHILA  236 (305)
Q Consensus       158 ~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~~~  236 (305)
                      .|+.+|.++|++++.+.    .+++++||+++|||...   .....++.....+.+.. .++..++|+|++|+|++++.+
T Consensus       129 ~Y~~sK~~~E~~~~~~~----~~~~ilR~~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  201 (287)
T 3sc6_A          129 IYGASKYAGEQFVKELH----NKYFIVRTSWLYGKYGN---NFVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKL  201 (287)
T ss_dssp             HHHHHHHHHHHHHHHHC----SSEEEEEECSEECSSSC---CHHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhC----CCcEEEeeeeecCCCCC---cHHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHH
Confidence            89999999999997653    48899999999998743   23344555555555443 355689999999999999999


Q ss_pred             hcccccCceEEEe-cCCcCHHHHHHHHHHhCCCCC----CCCC-CCCCCCCCCCcccchhHHHHhCCCccc-cCCC
Q 039049          237 MEETRASGRLICS-SSVAHWSPIIEMLKATYPSYP----YESK-CSKQEGDNSPHSMDTSKLFELGFVGFK-SVPQ  305 (305)
Q Consensus       237 ~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~lg~~~~~-~l~e  305 (305)
                      ++++. ++.||++ ++.+|+.|+++.+.+.+|...    ++.. ............+|++|++.||| +|. +|+|
T Consensus       202 ~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~-~p~~~~~~  275 (287)
T 3sc6_A          202 IHTSL-YGTYHVSNTGSCSWFEFAKKIFSYANMKVNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGF-LQMPSWEE  275 (287)
T ss_dssp             HTSCC-CEEEECCCBSCEEHHHHHHHHHHHHTCCCEEEEECHHHHCCSSCCCSBCCBCCHHHHHTTC-CCCCBHHH
T ss_pred             HhCCC-CCeEEEcCCCcccHHHHHHHHHHHcCCCcceeeeehhhcCcccCCCCcccccHHHHHhhCC-CCCccHHH
Confidence            99877 7899996 578999999999999997531    1100 02233445667899999999999 887 7653

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=100.00  E-value=3.8e-42  Score=294.88  Aligned_cols=271  Identities=17%  Similarity=0.202  Sum_probs=210.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi~   79 (305)
                      |+||||||+||||++|++.|+++|++|+++.|+.                      .+|+.|.+.+.++++  ++|+|||
T Consensus         4 ~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~----------------------~~D~~d~~~~~~~~~~~~~d~vih   61 (321)
T 1e6u_A            4 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDSRAVHDFFASERIDQVYL   61 (321)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc----------------------cCCccCHHHHHHHHHhcCCCEEEE
Confidence            5899999999999999999999999999987652                      269999999999998  9999999


Q ss_pred             eccccccC-CCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCC----CCcccccc
Q 039049           80 TASPVLVP-YDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW----SDPDYCKH  154 (305)
Q Consensus        80 ~a~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~----~~~~~~~~  154 (305)
                      +|+..... .+...+...+++|+.++.+++++|++. ++++|||+||.++|+...    ..+++|+++    ..|.    
T Consensus        62 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~vyg~~~----~~~~~E~~~~~~~~~p~----  132 (321)
T 1e6u_A           62 AAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN-DVNKLLFLGSSCIYPKLA----KQPMAESELLQGTLEPT----  132 (321)
T ss_dssp             CCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGGSCTTC----CSSBCGGGTTSSCCCGG----
T ss_pred             cCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEccHHHcCCCC----CCCcCccccccCCCCCC----
Confidence            99976421 123355678899999999999999998 889999999999887543    257788763    3332    


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCC---CchHHHHHHHHh----c-CCCC-C--CCCCccc
Q 039049          155 YNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQP---TSTLLLILAMVK----G-LRGE-Y--PNTTVGF  223 (305)
Q Consensus       155 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~---~~~~~~~~~~~~----~-~~~~-~--~~~~~~~  223 (305)
                       .+.|+.+|..+|.+++.++++++++++++||+++|||+.....   .....++..+..    | .++. .  ++..++|
T Consensus       133 -~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~  211 (321)
T 1e6u_A          133 -NEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREF  211 (321)
T ss_dssp             -GHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECE
T ss_pred             -CCccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEe
Confidence             1579999999999999998888999999999999999865321   233445555443    2 2322 2  3448999


Q ss_pred             eeHHHHHHHHHHhhccccc---------CceEEEe-cCCcCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCcccchhHHH
Q 039049          224 VHIDDVVGAHILAMEETRA---------SGRLICS-SSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLF  293 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~~---------~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (305)
                      +|++|+|++++.+++++..         ++.||++ ++.+|+.|+++.+.+.+|...........+.......+|++|++
T Consensus       212 i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~  291 (321)
T 1e6u_A          212 LHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVTRLH  291 (321)
T ss_dssp             EEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETTSCCCCSBCCBCCHHHH
T ss_pred             EEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCCceEeCCCCCCCcccccCCHHHHH
Confidence            9999999999999988664         4789995 67899999999999998753111111112334556789999999


Q ss_pred             HhCCCccc-cCCC
Q 039049          294 ELGFVGFK-SVPQ  305 (305)
Q Consensus       294 ~lg~~~~~-~l~e  305 (305)
                      +||| +|+ +|+|
T Consensus       292 ~lG~-~p~~~~~~  303 (321)
T 1e6u_A          292 QLGW-YHEISLEA  303 (321)
T ss_dssp             HTTC-CCCCCHHH
T ss_pred             hcCC-ccCCcHHH
Confidence            9999 887 7653

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=2.2e-41  Score=295.90  Aligned_cols=291  Identities=17%  Similarity=0.119  Sum_probs=219.3

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccC----ccCceEEEEccCCCcchHHHHhcC--C
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNG----AEERLKIMKADLLMEGSFDEAIQG--V   74 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~D~~d~~~~~~~~~~--~   74 (305)
                      ||+||||||+||||+++++.|+++|++|++++|+...... ..+.....    ...+++++.+|+.|.+.+.+++++  +
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   79 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNT-ERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQP   79 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC----------------------CCEEECCCCSSCHHHHHHHHHHHCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccch-HHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCC
Confidence            8999999999999999999999999999999998653110 11111100    124788999999999999998874  7


Q ss_pred             CEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCc---cEEEEeccceeeeccCCCCCCcccCCCCCCCccc
Q 039049           75 DGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSV---KRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDY  151 (305)
Q Consensus        75 d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~  151 (305)
                      |+|||+|+........+.+...+++|+.++.+++++|.+. ++   ++|||+||.++|+...    ..+++|+++..|. 
T Consensus        80 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~iv~~SS~~v~g~~~----~~~~~E~~~~~~~-  153 (372)
T 1db3_A           80 DEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL-GLEKKTRFYQASTSELYGLVQ----EIPQKETTPFYPR-  153 (372)
T ss_dssp             SEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEEEEEEEGGGGTTCC----SSSBCTTSCCCCC-
T ss_pred             CEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-CCCCCcEEEEeCChhhhCCCC----CCCCCccCCCCCC-
Confidence            9999999987654445566778899999999999999988 77   7999999999887543    2578898887775 


Q ss_pred             ccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC--chHHHHHHHHhcCCC--CCC--CCCcccee
Q 039049          152 CKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPT--STLLLILAMVKGLRG--EYP--NTTVGFVH  225 (305)
Q Consensus       152 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~--~~~--~~~~~~i~  225 (305)
                           +.|+.+|.++|.+++.++.+++++++++|++++|||+......  ....++..+..+...  .++  +..++|+|
T Consensus       154 -----~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~  228 (372)
T 1db3_A          154 -----SPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGH  228 (372)
T ss_dssp             -----SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEE
T ss_pred             -----ChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeE
Confidence                 7899999999999999998899999999999999997543211  122344455556532  233  44899999


Q ss_pred             HHHHHHHHHHhhcccccCceEEEe-cCCcCHHHHHHHHHHhCCCC-C-----CCCC------------------------
Q 039049          226 IDDVVGAHILAMEETRASGRLICS-SSVAHWSPIIEMLKATYPSY-P-----YESK------------------------  274 (305)
Q Consensus       226 v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~-~-----~~~~------------------------  274 (305)
                      ++|+|++++.+++++. ++.||++ ++.+|+.|+++.+.+.+|.. +     +|..                        
T Consensus       229 v~Dva~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (372)
T 1db3_A          229 AKDYVKMQWMMLQQEQ-PEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVD  307 (372)
T ss_dssp             HHHHHHHHHHTTSSSS-CCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEEC
T ss_pred             HHHHHHHHHHHHhcCC-CceEEEcCCCceeHHHHHHHHHHHhCCCcccccccccccccccccccccccccccccceeecc
Confidence            9999999999998765 4789985 67899999999999998742 1     1110                        


Q ss_pred             CC-CCCCCCCCcccchhHHHH-hCCCccc-cCCC
Q 039049          275 CS-KQEGDNSPHSMDTSKLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       275 ~~-~~~~~~~~~~~~~~~~~~-lg~~~~~-~l~e  305 (305)
                      +. .++.......+|++|+++ ||| +|+ +|+|
T Consensus       308 ~~~~~~~~~~~~~~d~~k~~~~lG~-~p~~~l~e  340 (372)
T 1db3_A          308 PRYFRPAEVETLLGDPTKAHEKLGW-KPEITLRE  340 (372)
T ss_dssp             GGGCCCCC-CCCCBCCHHHHHHHCC-CCCSCHHH
T ss_pred             ccccCCCchhhhccCHHHHHHHhCC-ccccCHHH
Confidence            00 123334456789999999 999 986 7753

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=100.00  E-value=7.7e-42  Score=292.50  Aligned_cols=278  Identities=20%  Similarity=0.259  Sum_probs=215.1

Q ss_pred             cEEEeCCcchHHHHHHHHHHHc--CCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEE
Q 039049            3 EYCVTGGTGFIAAHLVKALLDK--GHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVF   78 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi   78 (305)
                      +||||||+||||++|++.|++.  |++|++++|+.....             +++++.+|+.|.+.+.++++  ++|+||
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-------------~~~~~~~D~~d~~~~~~~~~~~~~d~vi   67 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-------------GIKFITLDVSNRDEIDRAVEKYSIDAIF   67 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-------------TCCEEECCTTCHHHHHHHHHHTTCCEEE
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-------------CceEEEecCCCHHHHHHHHhhcCCcEEE
Confidence            5999999999999999999998  899999998764321             45788999999999999998  899999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchh
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLW  158 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  158 (305)
                      |+|+..... ..+.+...+++|+.++.+++++|++. ++++|||+||.++|+....   ..+..|+++..|.      +.
T Consensus        68 h~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~---~~~~~e~~~~~p~------~~  136 (317)
T 3ajr_A           68 HLAGILSAK-GEKDPALAYKVNMNGTYNILEAAKQH-RVEKVVIPSTIGVFGPETP---KNKVPSITITRPR------TM  136 (317)
T ss_dssp             ECCCCCHHH-HHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGCCTTSC---SSSBCSSSCCCCC------SH
T ss_pred             ECCcccCCc-cccChHHHhhhhhHHHHHHHHHHHHc-CCCEEEEecCHHHhCCCCC---CCCccccccCCCC------ch
Confidence            999976432 23455678999999999999999998 8999999999998876422   2467777776665      88


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCC---CchHHHHHHHHhcCC-CCC--CCCCccceeHHHHHHH
Q 039049          159 YAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQP---TSTLLLILAMVKGLR-GEY--PNTTVGFVHIDDVVGA  232 (305)
Q Consensus       159 Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~---~~~~~~~~~~~~~~~-~~~--~~~~~~~i~v~D~a~~  232 (305)
                      |+.+|.++|.+++.+.++++++++++||+++||+...+..   ......+.....+.. ...  ++..++|+|++|+|++
T Consensus       137 Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a  216 (317)
T 3ajr_A          137 FGVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKA  216 (317)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHH
Confidence            9999999999999988888999999999999998643322   122233344444333 222  3448999999999999


Q ss_pred             HHHhhccccc----CceEEEecCCcCHHHHHHHHHHhCCCCCCCCCCCCCC--CCCCCcccchhHHHH-hCCCccc-cCC
Q 039049          233 HILAMEETRA----SGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQE--GDNSPHSMDTSKLFE-LGFVGFK-SVP  304 (305)
Q Consensus       233 ~~~~~~~~~~----~~~~~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-lg~~~~~-~l~  304 (305)
                      ++.+++++..    ++.||++++.+|+.|+++.+.+.+|...++..+....  .......+|++|+++ ||| +|+ +|+
T Consensus       217 ~~~~l~~~~~~~~~g~~~~i~~~~~s~~e~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~k~~~~lG~-~p~~~~~  295 (317)
T 3ajr_A          217 LVDLYEADRDKLVLRNGYNVTAYTFTPSELYSKIKERIPEFEIEYKEDFRDKIAATWPESLDSSEASNEWGF-SIEYDLD  295 (317)
T ss_dssp             HHHHHHCCGGGCSSCSCEECCSEEECHHHHHHHHHTTCCSCCEEECCCHHHHHHTTSCSCBCCHHHHHHHCC-CCCCCHH
T ss_pred             HHHHHhCCccccccCceEecCCccccHHHHHHHHHHHCCccccccccccchhhccccccccCHHHHHHHcCC-CCCCCHH
Confidence            9999987653    3689998778999999999999997433322111000  012235789999999 999 997 765


Q ss_pred             C
Q 039049          305 Q  305 (305)
Q Consensus       305 e  305 (305)
                      |
T Consensus       296 ~  296 (317)
T 3ajr_A          296 R  296 (317)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=100.00  E-value=5.6e-41  Score=290.35  Aligned_cols=289  Identities=18%  Similarity=0.116  Sum_probs=221.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcC--CCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQG--VDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~Vi~   79 (305)
                      |+||||||+||||++|++.|+++|++|++++|++..... ..+.... ...+++++.+|+.|.+.+.+++++  +|+|||
T Consensus         4 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~-~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   81 (345)
T 2z1m_A            4 KRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS-WRLKELG-IENDVKIIHMDLLEFSNIIRTIEKVQPDEVYN   81 (345)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT-HHHHHTT-CTTTEEECCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc-ccHhhcc-ccCceeEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence            689999999999999999999999999999998764321 1121111 123688999999999999999874  699999


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCc-cEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchh
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSV-KRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLW  158 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  158 (305)
                      +|+......+.+.+...+++|+.++.+++++|.+. ++ ++|||+||.++|+....    .+++|+++..+.      +.
T Consensus        82 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~~SS~~vyg~~~~----~~~~e~~~~~~~------~~  150 (345)
T 2z1m_A           82 LAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTV-KPDTKFYQASTSEMFGKVQE----IPQTEKTPFYPR------SP  150 (345)
T ss_dssp             CCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTCEEEEEEEGGGGCSCSS----SSBCTTSCCCCC------SH
T ss_pred             CCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEEechhhcCCCCC----CCCCccCCCCCC------Ch
Confidence            99986532234556778999999999999999988 76 89999999998876432    578888877665      78


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCc--hHHHHHHHHhcCCC--CCCC--CCccceeHHHHHHH
Q 039049          159 YAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTS--TLLLILAMVKGLRG--EYPN--TTVGFVHIDDVVGA  232 (305)
Q Consensus       159 Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~--~~~~~~~~~~~~~~--~~~~--~~~~~i~v~D~a~~  232 (305)
                      |+.+|.++|.+++.++.+++++++++|++++|||+.......  ...++.....+...  ..++  ..++|+|++|+|++
T Consensus       151 Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a  230 (345)
T 2z1m_A          151 YAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEA  230 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHH
Confidence            999999999999999888899999999999999985432111  12233444455432  2333  37899999999999


Q ss_pred             HHHhhcccccCceEEEe-cCCcCHHHHHHHHHHhCCCCC------CCCC------------C---CCCCCCCCCcccchh
Q 039049          233 HILAMEETRASGRLICS-SSVAHWSPIIEMLKATYPSYP------YESK------------C---SKQEGDNSPHSMDTS  290 (305)
Q Consensus       233 ~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~------~~~~------------~---~~~~~~~~~~~~~~~  290 (305)
                      ++.+++++. ++.||++ ++.+|+.|+++.+.+.+|...      +|..            .   ..++.......+|++
T Consensus       231 ~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  309 (345)
T 2z1m_A          231 MWLMMQQPE-PDDYVIATGETHTVREFVEKAAKIAGFDIEWVGEGINEKGIDRNTGKVIVEVSEEFFRPAEVDILVGNPE  309 (345)
T ss_dssp             HHHHHTSSS-CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCH
T ss_pred             HHHHHhCCC-CceEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccccccccccccccCcccCCCCCcceeecCHH
Confidence            999998765 4789985 678999999999999997531      1110            0   012233445678999


Q ss_pred             HHHH-hCCCccc-cCCC
Q 039049          291 KLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       291 ~~~~-lg~~~~~-~l~e  305 (305)
                      |+++ ||| +|+ +|+|
T Consensus       310 k~~~~lG~-~p~~~~~~  325 (345)
T 2z1m_A          310 KAMKKLGW-KPRTTFDE  325 (345)
T ss_dssp             HHHHHHCC-CCCSCHHH
T ss_pred             HHHHHcCC-cccCCHHH
Confidence            9999 999 887 7653

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=100.00  E-value=3.5e-41  Score=284.27  Aligned_cols=254  Identities=14%  Similarity=0.091  Sum_probs=198.7

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ||+|||||| ||||++|++.|+++|++|++++|++.+.....        ..+++++.+|+.|.+     +.++|+|||+
T Consensus         5 ~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~D~~d~~-----~~~~d~vi~~   70 (286)
T 3ius_A            5 TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR--------ASGAEPLLWPGEEPS-----LDGVTHLLIS   70 (286)
T ss_dssp             CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH--------HTTEEEEESSSSCCC-----CTTCCEEEEC
T ss_pred             cCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh--------hCCCeEEEecccccc-----cCCCCEEEEC
Confidence            579999998 99999999999999999999999875432211        137899999999955     7799999999


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHh--cCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchh
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKK--AKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLW  158 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  158 (305)
                      |+.....    .         ..+.++++++++  . ++++|||+||.++|+...    ..+++|+++..|.      +.
T Consensus        71 a~~~~~~----~---------~~~~~l~~a~~~~~~-~~~~~v~~Ss~~vyg~~~----~~~~~E~~~~~p~------~~  126 (286)
T 3ius_A           71 TAPDSGG----D---------PVLAALGDQIAARAA-QFRWVGYLSTTAVYGDHD----GAWVDETTPLTPT------AA  126 (286)
T ss_dssp             CCCBTTB----C---------HHHHHHHHHHHHTGG-GCSEEEEEEEGGGGCCCT----TCEECTTSCCCCC------SH
T ss_pred             CCccccc----c---------HHHHHHHHHHHhhcC-CceEEEEeecceecCCCC----CCCcCCCCCCCCC------CH
Confidence            9976532    1         125788888888  5 889999999999887643    2688999988887      88


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCC--CCCCccceeHHHHHHHHHHh
Q 039049          159 YAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEY--PNTTVGFVHIDDVVGAHILA  236 (305)
Q Consensus       159 Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~D~a~~~~~~  236 (305)
                      |+.+|+++|++++.+   .+++++++||+++||++....        ..+..+....+  ++..++|+|++|+|++++.+
T Consensus       127 Y~~sK~~~E~~~~~~---~~~~~~ilRp~~v~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~  195 (286)
T 3ius_A          127 RGRWRVMAEQQWQAV---PNLPLHVFRLAGIYGPGRGPF--------SKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAAS  195 (286)
T ss_dssp             HHHHHHHHHHHHHHS---TTCCEEEEEECEEEBTTBSSS--------TTSSSSCCCEEECTTCCBCEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhh---cCCCEEEEeccceECCCchHH--------HHHhcCCccccCCCCcccceEEHHHHHHHHHHH
Confidence            999999999999776   689999999999999975431        12223443332  33489999999999999999


Q ss_pred             hcccccCceEEEe-cCCcCHHHHHHHHHHhCCCCCCCCCC--CCCCC------CCCCcccchhHHHH-hCCCccc--cCC
Q 039049          237 MEETRASGRLICS-SSVAHWSPIIEMLKATYPSYPYESKC--SKQEG------DNSPHSMDTSKLFE-LGFVGFK--SVP  304 (305)
Q Consensus       237 ~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~--~~~~~------~~~~~~~~~~~~~~-lg~~~~~--~l~  304 (305)
                      ++++..++.||++ ++.+|+.|+++.+.+.+|....+...  .....      ......+|++|+++ ||| +|+  +|+
T Consensus       196 ~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~-~p~~p~~~  274 (286)
T 3ius_A          196 MARPDPGAVYNVCDDEPVPPQDVIAYAAELQGLPLPPAVDFDKADLTPMARSFYSENKRVRNDRIKEELGV-RLKYPNYR  274 (286)
T ss_dssp             HHSCCTTCEEEECCSCCBCHHHHHHHHHHHHTCCCCCEEEGGGSCCCHHHHHTTSCCCEECCHHHHHTTCC-CCSCSSHH
T ss_pred             HhCCCCCCEEEEeCCCCccHHHHHHHHHHHcCCCCCcccchhhhccChhHHHhhcCCceeehHHHHHHhCC-CCCcCCHH
Confidence            9998877799996 67899999999999999753221111  10111      13567899999999 999 887  464

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=100.00  E-value=1.5e-40  Score=287.31  Aligned_cols=290  Identities=27%  Similarity=0.413  Sum_probs=214.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEE-EccCCCcchHHHHhcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIM-KADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      |+||||||+||||++|+++|+++|++|++++|+..+........... ...+++++ .+|+.|.+.+.++++++|+|||+
T Consensus        12 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~   90 (342)
T 1y1p_A           12 SLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAK-YPGRFETAVVEDMLKQGAYDEVIKGAAGVAHI   90 (342)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-STTTEEEEECSCTTSTTTTTTTTTTCSEEEEC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhcc-CCCceEEEEecCCcChHHHHHHHcCCCEEEEe
Confidence            68999999999999999999999999999999765322211110000 01368888 79999999999999999999999


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcc----------
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPD----------  150 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~----------  150 (305)
                      |+.....   ..+...+++|+.++.+++++|.+..++++|||+||.++|+.........+++|+++....          
T Consensus        91 A~~~~~~---~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  167 (342)
T 1y1p_A           91 ASVVSFS---NKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPES  167 (342)
T ss_dssp             CCCCSCC---SCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTT
T ss_pred             CCCCCCC---CCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhcccccc
Confidence            9987642   355668999999999999999853378999999999887643211112578888742110          


Q ss_pred             cccccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEecCceecCCCCCCCC--chHHHHHHHHhcCCCC-CCC-CCccce
Q 039049          151 YCKHYNLWYAYAKTIAEKEAWRIAKDC--GIDMVVVNPSFVVGPLLAPQPT--STLLLILAMVKGLRGE-YPN-TTVGFV  224 (305)
Q Consensus       151 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~i~Rp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~-~~~-~~~~~i  224 (305)
                      .+..+.+.|+.+|.++|.+++.+++++  +++++++||+++||+.......  ....++..+..+.+.. .++ ..++|+
T Consensus       168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  247 (342)
T 1y1p_A          168 DPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYV  247 (342)
T ss_dssp             STTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEEEE
T ss_pred             ccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccCCcCCEe
Confidence            001112779999999999999998775  7889999999999998654321  3455666777666543 222 478999


Q ss_pred             eHHHHHHHHHHhhcccccCc-eEEEecCCcCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCcccchhHHHH-hCC
Q 039049          225 HIDDVVGAHILAMEETRASG-RLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFE-LGF  297 (305)
Q Consensus       225 ~v~D~a~~~~~~~~~~~~~~-~~~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lg~  297 (305)
                      |++|+|++++.+++++...+ .+.++++.+|+.|+++.+.+.+|...++.....  .......+|++|+++ |||
T Consensus       248 ~v~Dva~a~~~~~~~~~~~g~~~~~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~--~~~~~~~~d~~k~~~~lg~  320 (342)
T 1y1p_A          248 SAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPD--QGQDLSKFDTAPSLEILKS  320 (342)
T ss_dssp             EHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSCCCCCCCC--CCCCCCEECCHHHHHHHHH
T ss_pred             EHHHHHHHHHHHHcCcccCCceEEEeCCCCCHHHHHHHHHHHCCCccCCCCCCc--cccccccCChHHHHHHHhh
Confidence            99999999999998765444 455567789999999999999986433322211  122347789999999 876

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=100.00  E-value=1.8e-40  Score=285.56  Aligned_cols=272  Identities=18%  Similarity=0.208  Sum_probs=210.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi~   79 (305)
                      |+||||||+||||++|++.|++.|++|++++|+.......  ...    ..+++++.+|+.|.+.+.++++  ++|+|||
T Consensus        21 ~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--~~~----l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih   94 (330)
T 2pzm_A           21 MRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREV--LPP----VAGLSVIEGSVTDAGLLERAFDSFKPTHVVH   94 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGG--SCS----CTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhh--hhc----cCCceEEEeeCCCHHHHHHHHhhcCCCEEEE
Confidence            6899999999999999999999999999999975432210  011    1378999999999999999998  9999999


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhH
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWY  159 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y  159 (305)
                      |||..... +...+.  +++|+.++.+++++|.+. ++++|||+||.++|+.....  ..+++|++  .+.      +.|
T Consensus        95 ~A~~~~~~-~~~~~~--~~~N~~~~~~l~~a~~~~-~~~~iV~~SS~~~~~~~~~~--~~~~~E~~--~~~------~~Y  160 (330)
T 2pzm_A           95 SAAAYKDP-DDWAED--AATNVQGSINVAKAASKA-GVKRLLNFQTALCYGRPATV--PIPIDSPT--APF------TSY  160 (330)
T ss_dssp             CCCCCSCT-TCHHHH--HHHHTHHHHHHHHHHHHH-TCSEEEEEEEGGGGCSCSSS--SBCTTCCC--CCC------SHH
T ss_pred             CCccCCCc-cccChh--HHHHHHHHHHHHHHHHHc-CCCEEEEecCHHHhCCCccC--CCCcCCCC--CCC------ChH
Confidence            99987643 233444  899999999999999988 88999999999987653210  12777876  333      779


Q ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCC-CccceeHHHHHH-HHHHhh
Q 039049          160 AYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNT-TVGFVHIDDVVG-AHILAM  237 (305)
Q Consensus       160 ~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~D~a~-~~~~~~  237 (305)
                      +.+|.++|.+++.+    +++++++||+++|||+.  .......++.....+. ..++++ .++|+|++|+|+ +++.++
T Consensus       161 ~~sK~~~e~~~~~~----~~~~~~iR~~~v~gp~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~Dva~~a~~~~~  233 (330)
T 2pzm_A          161 GISKTAGEAFLMMS----DVPVVSLRLANVTGPRL--AIGPIPTFYKRLKAGQ-KCFCSDTVRDFLDMSDFLAIADLSLQ  233 (330)
T ss_dssp             HHHHHHHHHHHHTC----SSCEEEEEECEEECTTC--CSSHHHHHHHHHHTTC-CCCEESCEECEEEHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHc----CCCEEEEeeeeeECcCC--CCCHHHHHHHHHHcCC-EEeCCCCEecceeHHHHHHHHHHHHh
Confidence            99999999998765    89999999999999985  1223334455555555 334333 689999999999 999999


Q ss_pred             cccccCceEEEe-cCCcCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCcccchhHH-----HHhCCCccc-cCC
Q 039049          238 EETRASGRLICS-SSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKL-----FELGFVGFK-SVP  304 (305)
Q Consensus       238 ~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~lg~~~~~-~l~  304 (305)
                      +++. ++.||++ +..+|+.|+++.+.+.+|..++... .... ......+|++|+     ++||| +|+ +|+
T Consensus       234 ~~~~-g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~-~~~~-~~~~~~~d~~k~~~~~l~~lG~-~p~~~~~  303 (330)
T 2pzm_A          234 EGRP-TGVFNVSTGEGHSIKEVFDVVLDYVGATLAEPV-PVVA-PGADDVPSVVLDPSKTETEFGW-KAKVDFK  303 (330)
T ss_dssp             TTCC-CEEEEESCSCCEEHHHHHHHHHHHHTCCCSSCC-CEEC-CCTTSCSEECBCCHHHHHHHCC-CCCCCHH
T ss_pred             hcCC-CCEEEeCCCCCCCHHHHHHHHHHHhCCCCceeC-CCCc-chhhccCCHHHHhhchHHHcCC-cccCCHH
Confidence            8866 7789996 5789999999999999875422111 1111 445678888888     66999 886 765

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=100.00  E-value=8.5e-41  Score=293.12  Aligned_cols=290  Identities=17%  Similarity=0.128  Sum_probs=219.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCccc--chhhhhhc-cCccC-ceEEEEccCCCcchHHHHhcC--CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLS--KVGFLWEL-NGAEE-RLKIMKADLLMEGSFDEAIQG--VD   75 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~--~~~~~~~~-~~~~~-~~~~~~~D~~d~~~~~~~~~~--~d   75 (305)
                      |+||||||+||||++|++.|++.|++|++++|+.....  ....+... ..... +++++.+|+.|.+.+.+++++  +|
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  108 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD  108 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCCC
Confidence            68999999999999999999999999999999875421  11111000 00012 688999999999999999874  69


Q ss_pred             EEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCcc-----EEEEeccceeeeccCCCCCCcccCCCCCCCcc
Q 039049           76 GVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVK-----RVVLTSSCSSIRYRHDAQQVSPLNESHWSDPD  150 (305)
Q Consensus        76 ~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~  150 (305)
                      +|||+|+......+.+.+...+++|+.++.+++++|.+. +++     +|||+||.++|+...     .+++|+++..|.
T Consensus       109 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~~~~~~~~~v~~SS~~vyg~~~-----~~~~E~~~~~~~  182 (381)
T 1n7h_A          109 EVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH-TIDSGRTVKYYQAGSSEMFGSTP-----PPQSETTPFHPR  182 (381)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHH-HHHHCCCCEEEEEEEGGGGTTSC-----SSBCTTSCCCCC
T ss_pred             EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-CCccCCccEEEEeCcHHHhCCCC-----CCCCCCCCCCCC
Confidence            999999986532223456678999999999999999987 766     999999999887532     278888877766


Q ss_pred             cccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC--chHHHHHHHHhcCCCC--CC--CCCccce
Q 039049          151 YCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPT--STLLLILAMVKGLRGE--YP--NTTVGFV  224 (305)
Q Consensus       151 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~--~~--~~~~~~i  224 (305)
                            +.|+.+|.++|.+++.++.+++++++++|++++|||+......  ....++..+..+....  ++  +..++|+
T Consensus       183 ------~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v  256 (381)
T 1n7h_A          183 ------SPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWG  256 (381)
T ss_dssp             ------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECE
T ss_pred             ------CchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeE
Confidence                  7899999999999999988889999999999999998543211  1123344455554322  33  3479999


Q ss_pred             eHHHHHHHHHHhhcccccCceEEEe-cCCcCHHHHHHHHHHhCCCCC---CCCCC-CCCCCCCCCcccchhHHHH-hCCC
Q 039049          225 HIDDVVGAHILAMEETRASGRLICS-SSVAHWSPIIEMLKATYPSYP---YESKC-SKQEGDNSPHSMDTSKLFE-LGFV  298 (305)
Q Consensus       225 ~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~-lg~~  298 (305)
                      |++|+|++++.+++++. ++.||++ ++.+|+.|+++.+.+.+|...   ++... ..++.......+|++|+++ ||| 
T Consensus       257 ~v~Dva~a~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~-  334 (381)
T 1n7h_A          257 FAGDYVEAMWLMLQQEK-PDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGDASKAKEVLGW-  334 (381)
T ss_dssp             EHHHHHHHHHHHHTSSS-CCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGGSCSSCCCBCCBCCHHHHHHHCC-
T ss_pred             EHHHHHHHHHHHHhCCC-CCeEEeeCCCCCcHHHHHHHHHHHcCCCcccccccCcccCCccccccccCCHHHHHHhcCC-
Confidence            99999999999998765 4789996 568999999999999997521   11111 1123344557789999999 999 


Q ss_pred             ccc-cCCC
Q 039049          299 GFK-SVPQ  305 (305)
Q Consensus       299 ~~~-~l~e  305 (305)
                      +|+ +|+|
T Consensus       335 ~p~~~l~e  342 (381)
T 1n7h_A          335 KPQVGFEK  342 (381)
T ss_dssp             CCCSCHHH
T ss_pred             cccCCHHH
Confidence            986 7753

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=100.00  E-value=1e-41  Score=289.43  Aligned_cols=263  Identities=11%  Similarity=0.025  Sum_probs=208.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcC--CCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQG--VDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~Vi~   79 (305)
                      |+||||||+||||++|++.|+ +|++|++++|++.                   ++.+|+.|.+.+.+++++  +|+|||
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-------------------~~~~D~~d~~~~~~~~~~~~~d~vih   60 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-------------------EFCGDFSNPKGVAETVRKLRPDVIVN   60 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-------------------SSCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-------------------cccccCCCHHHHHHHHHhcCCCEEEE
Confidence            579999999999999999999 8999999998752                   246899999999999885  999999


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhH
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWY  159 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y  159 (305)
                      +|+......+...+...+++|+.++.+++++|++. ++ ||||+||.++|+....    .+++|+++..|.      +.|
T Consensus        61 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~vy~~~~~----~~~~E~~~~~p~------~~Y  128 (299)
T 1n2s_A           61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANET-GA-WVVHYSTDYVFPGTGD----IPWQETDATSPL------NVY  128 (299)
T ss_dssp             CCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTT-TC-EEEEEEEGGGSCCCTT----CCBCTTSCCCCS------SHH
T ss_pred             CcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEecccEEeCCCC----CCCCCCCCCCCc------cHH
Confidence            99976543234456678999999999999999988 76 8999999998876432    588999887776      889


Q ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCC-CCCCCccceeHHHHHHHHHHhhc
Q 039049          160 AYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGE-YPNTTVGFVHIDDVVGAHILAME  238 (305)
Q Consensus       160 ~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~~~~~  238 (305)
                      +.+|.++|.+++.+.    .+++++||+++||++..   .....++.....+.+.. .++..++|+|++|+|++++.+++
T Consensus       129 ~~sK~~~E~~~~~~~----~~~~ilRp~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  201 (299)
T 1n2s_A          129 GKTKLAGEKALQDNC----PKHLIFRTSWVYAGKGN---NFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIR  201 (299)
T ss_dssp             HHHHHHHHHHHHHHC----SSEEEEEECSEECSSSC---CHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhC----CCeEEEeeeeecCCCcC---cHHHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHHHH
Confidence            999999999997653    49999999999999753   23344555556665443 45568999999999999999998


Q ss_pred             cc--c--cCceEEEe-cCCcCHHHHHHHHHHhCCCCC----CCC---CC----CCCCCCCCCcccchhHHHH-hCCCccc
Q 039049          239 ET--R--ASGRLICS-SSVAHWSPIIEMLKATYPSYP----YES---KC----SKQEGDNSPHSMDTSKLFE-LGFVGFK  301 (305)
Q Consensus       239 ~~--~--~~~~~~~~-~~~~s~~el~~~i~~~~~~~~----~~~---~~----~~~~~~~~~~~~~~~~~~~-lg~~~~~  301 (305)
                      ++  .  .++.||++ ++.+|+.|+++.+.+.+|...    .+.   ..    ...........+|++|+++ ||| +|+
T Consensus       202 ~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~-~p~  280 (299)
T 1n2s_A          202 VALNKPEVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDL-ILP  280 (299)
T ss_dssp             HHHHCGGGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHHHTC-CCC
T ss_pred             HhccccccCceEEEeCCCCCCHHHHHHHHHHHhCCCccccccccccccccccccCcCCCCCceeeeHHHHHHhcCC-CCC
Confidence            76  2  36789996 578999999999999875321    010   00    0112234567899999999 999 988


Q ss_pred             cCC
Q 039049          302 SVP  304 (305)
Q Consensus       302 ~l~  304 (305)
                      +|+
T Consensus       281 ~~~  283 (299)
T 1n2s_A          281 QWE  283 (299)
T ss_dssp             BHH
T ss_pred             CHH
Confidence            664

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-40  Score=284.31  Aligned_cols=277  Identities=18%  Similarity=0.212  Sum_probs=203.7

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcC-CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcC-----CCE
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKG-HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQG-----VDG   76 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-----~d~   76 (305)
                      +||||||+||||++|+++|+++| ++|++++|+..... ...+   .    ++. +.+|+.|.+.+.+++++     +|+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~~---~----~~~-~~~d~~~~~~~~~~~~~~~~~~~d~   71 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FVNL---V----DLN-IADYMDKEDFLIQIMAGEEFGDVEA   71 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG-GHHH---H----TSC-CSEEEEHHHHHHHHHTTCCCSSCCE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch-hhhc---C----cce-eccccccHHHHHHHHhccccCCCcE
Confidence            59999999999999999999999 99999999865321 1111   1    233 67899999889998875     999


Q ss_pred             EEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccc
Q 039049           77 VFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYN  156 (305)
Q Consensus        77 Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  156 (305)
                      |||+|+....  +...+...+++|+.++.+++++|++. ++ +|||+||.++|+....    .+++|+++..|.      
T Consensus        72 vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v~g~~~~----~~~~E~~~~~p~------  137 (310)
T 1eq2_A           72 IFHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAATYGGRTS----DFIESREYEKPL------  137 (310)
T ss_dssp             EEECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEEEGGGGTTCCS----CBCSSGGGCCCS------
T ss_pred             EEECcccccC--cccCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEeeHHHhCCCCC----CCCCCCCCCCCC------
Confidence            9999998764  34456778999999999999999998 88 9999999998765432    478888877765      


Q ss_pred             hhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCC---CCchHHHHHHHHhcCCCC-C--CCC-CccceeHHHH
Q 039049          157 LWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQ---PTSTLLLILAMVKGLRGE-Y--PNT-TVGFVHIDDV  229 (305)
Q Consensus       157 ~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~-~--~~~-~~~~i~v~D~  229 (305)
                      +.|+.+|.++|.+++.++.+++++++++||+++|||+....   ......++..+..+.+.. .  +.. .++|+|++|+
T Consensus       138 ~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dv  217 (310)
T 1eq2_A          138 NVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDV  217 (310)
T ss_dssp             SHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHH
Confidence            78999999999999998888899999999999999975421   123344566666666543 3  345 7899999999


Q ss_pred             HHHHHHhhcccccCceEEEe-cCCcCHHHHHHHHHHhCCCCCCCCCCCC---CCCCCCCcccchhHHHHhCCCc-cc-cC
Q 039049          230 VGAHILAMEETRASGRLICS-SSVAHWSPIIEMLKATYPSYPYESKCSK---QEGDNSPHSMDTSKLFELGFVG-FK-SV  303 (305)
Q Consensus       230 a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~lg~~~-~~-~l  303 (305)
                      |++++.+++++. ++.||++ ++.+|+.|+++.+.+.+|..++......   .........+|++|+++||| + |. +|
T Consensus       218 a~~~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~-~~~~~~l  295 (310)
T 1eq2_A          218 ADVNLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGY-DKPFKTV  295 (310)
T ss_dssp             HHHHHHHHHHCC-CEEEEESCSCCBCHHHHHHHC---------------------CCCSCCBCCHHHHHTTC-CCCCCCH
T ss_pred             HHHHHHHHhcCC-CCeEEEeCCCccCHHHHHHHHHHHcCCCCceeCCCChhhhcccccccccchHHHHhcCC-CCCCCCH
Confidence            999999998877 7889995 6789999999999999875312111111   11123456789999988999 4 33 65


Q ss_pred             C
Q 039049          304 P  304 (305)
Q Consensus       304 ~  304 (305)
                      +
T Consensus       296 ~  296 (310)
T 1eq2_A          296 A  296 (310)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=100.00  E-value=1.2e-40  Score=284.87  Aligned_cols=269  Identities=14%  Similarity=0.090  Sum_probs=184.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcC--CCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQG--VDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~Vi~   79 (305)
                      |+||||||+||||++|+++|+++|++|++++|+...              ++  ++.+|+.|.+.+.+++++  +|+|||
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--------------~~--~~~~Dl~d~~~~~~~~~~~~~d~vih   66 (315)
T 2ydy_A            3 RRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR--------------PK--FEQVNLLDSNAVHHIIHDFQPHVIVH   66 (315)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEC----------------------------------CHHHHHHHCCSEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC--------------CC--eEEecCCCHHHHHHHHHhhCCCEEEE
Confidence            789999999999999999999999999999987542              12  678999999999998874  899999


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhH
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWY  159 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y  159 (305)
                      +|+......+...+...+++|+.++.+++++|.+. ++ +|||+||.++|+..     ..+++|+++..|.      +.|
T Consensus        67 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v~~~~-----~~~~~E~~~~~~~------~~Y  133 (315)
T 2ydy_A           67 CAAERRPDVVENQPDAASQLNVDASGNLAKEAAAV-GA-FLIYISSDYVFDGT-----NPPYREEDIPAPL------NLY  133 (315)
T ss_dssp             CC-------------------CHHHHHHHHHHHHH-TC-EEEEEEEGGGSCSS-----SCSBCTTSCCCCC------SHH
T ss_pred             CCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEchHHHcCCC-----CCCCCCCCCCCCc------CHH
Confidence            99987654345667778999999999999999998 76 99999999988762     3688999887776      889


Q ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHH-hcCCCC-CCCCCccceeHHHHHHHHHHhh
Q 039049          160 AYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMV-KGLRGE-YPNTTVGFVHIDDVVGAHILAM  237 (305)
Q Consensus       160 ~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~i~v~D~a~~~~~~~  237 (305)
                      +.+|..+|.+++.+    +++++++||+.+||+...........++.... .+.... .++..++|+|++|+|++++.++
T Consensus       134 ~~sK~~~e~~~~~~----~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~  209 (315)
T 2ydy_A          134 GKTKLDGEKAVLEN----NLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLA  209 (315)
T ss_dssp             HHHHHHHHHHHHHH----CTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh----CCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHHHHH
Confidence            99999999998765    57889999999999976521112222344444 454432 3455889999999999999999


Q ss_pred             ccc----ccCceEEEe-cCCcCHHHHHHHHHHhCCCCCC-----CCCCCCCCCCCCCcccchhHHHHhCCCccc-cCC
Q 039049          238 EET----RASGRLICS-SSVAHWSPIIEMLKATYPSYPY-----ESKCSKQEGDNSPHSMDTSKLFELGFVGFK-SVP  304 (305)
Q Consensus       238 ~~~----~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~-~l~  304 (305)
                      +++    ..++.||++ ++.+|+.|+++.+.+.+|....     +..............+|++|++++|| +|. +|+
T Consensus       210 ~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~G~-~p~~~~~  286 (315)
T 2ydy_A          210 EKRMLDPSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKLETLGI-GQRTPFR  286 (315)
T ss_dssp             HHHHTCTTCCEEEECCCSCCBCHHHHHHHHHHHTTCCCTTEEEECSCCCSSSCCCSBCCBCCHHHHHTTC-CCCCCHH
T ss_pred             HhhccccCCCCeEEEcCCCcccHHHHHHHHHHHhCCChhheeccccccccccCCCcccccchHHHHhcCC-CCCCCHH
Confidence            864    456789996 5789999999999999975321     11011012234567899999999999 876 764

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=100.00  E-value=3.1e-40  Score=287.09  Aligned_cols=279  Identities=18%  Similarity=0.192  Sum_probs=214.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC-CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-----CCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG-HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-----GVD   75 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----~~d   75 (305)
                      |+||||||+||||++|++.|+++| ++|++++|+..... ...+   .    ++. +.+|+.|.+.+.++++     ++|
T Consensus        47 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~~---~----~~~-~~~d~~~~~~~~~~~~~~~~~~~d  117 (357)
T 2x6t_A           47 RMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FVNL---V----DLN-IADYMDKEDFLIQIMAGEEFGDVE  117 (357)
T ss_dssp             -CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG-GGGT---T----TSC-CSEEEEHHHHHHHHHTTCCCSSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch-hhcc---c----Cce-EeeecCcHHHHHHHHhhcccCCCC
Confidence            689999999999999999999999 99999999865321 1111   1    233 6789999998999887     599


Q ss_pred             EEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCccccccc
Q 039049           76 GVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHY  155 (305)
Q Consensus        76 ~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  155 (305)
                      +|||+|+....  +...+...+++|+.++.+++++|.+. ++ +|||+||.++|+....    .+++|+++..|.     
T Consensus       118 ~Vih~A~~~~~--~~~~~~~~~~~n~~~~~~ll~a~~~~-~~-r~V~~SS~~v~g~~~~----~~~~E~~~~~p~-----  184 (357)
T 2x6t_A          118 AIFHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAATYGGRTS----DFIESREYEKPL-----  184 (357)
T ss_dssp             EEEECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEEEGGGGCSCSS----CCCSSGGGCCCS-----
T ss_pred             EEEECCcccCC--ccCCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEcchHHhCCCCC----CCcCCcCCCCCC-----
Confidence            99999998664  34456778999999999999999998 88 9999999998765432    478888877765     


Q ss_pred             chhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCC---CCchHHHHHHHHhcCCCC-CCC--C-CccceeHHH
Q 039049          156 NLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQ---PTSTLLLILAMVKGLRGE-YPN--T-TVGFVHIDD  228 (305)
Q Consensus       156 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~-~~~--~-~~~~i~v~D  228 (305)
                       +.|+.+|.++|.+++.++.+++++++++||+++|||+....   ......++..+..+.... +++  . .++|+|++|
T Consensus       185 -~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  263 (357)
T 2x6t_A          185 -NVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGD  263 (357)
T ss_dssp             -SHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHH
T ss_pred             -ChhHHHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHH
Confidence             78999999999999999888899999999999999976432   123344556666665543 333  4 679999999


Q ss_pred             HHHHHHHhhcccccCceEEEe-cCCcCHHHHHHHHHHhCCCCCCCCCCCC---CCCCCCCcccchhHHHHhCCCccc-cC
Q 039049          229 VVGAHILAMEETRASGRLICS-SSVAHWSPIIEMLKATYPSYPYESKCSK---QEGDNSPHSMDTSKLFELGFVGFK-SV  303 (305)
Q Consensus       229 ~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~lg~~~~~-~l  303 (305)
                      +|++++.+++++. ++.||++ ++.+|+.|+++.+.+.+|..+++.....   .........+|++|+++|||..|. +|
T Consensus       264 va~ai~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~~~~~l  342 (357)
T 2x6t_A          264 VADVNLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTV  342 (357)
T ss_dssp             HHHHHHHHHHHCC-CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEECCCGGGTTSCCSBCCCCCHHHHHTTCCCCCCCH
T ss_pred             HHHHHHHHHhcCC-CCeEEecCCCcccHHHHHHHHHHHcCCCCceecCCCcccccccccccccCHHHHHHcCCCCCCCCH
Confidence            9999999999876 7889995 6789999999999999875422211111   112234567899999889992133 65


Q ss_pred             C
Q 039049          304 P  304 (305)
Q Consensus       304 ~  304 (305)
                      +
T Consensus       343 ~  343 (357)
T 2x6t_A          343 A  343 (357)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=100.00  E-value=9.9e-40  Score=281.24  Aligned_cols=277  Identities=19%  Similarity=0.200  Sum_probs=209.5

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcC--CCEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQG--VDGVF   78 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~Vi   78 (305)
                      ||+||||||+||||++|+++|++.|++|++++|+......  .+..    ..+++++.+|+.|.+.+.+++++  +|+||
T Consensus        21 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~l~~----~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vi   94 (333)
T 2q1w_A           21 MKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRRE--HLKD----HPNLTFVEGSIADHALVNQLIGDLQPDAVV   94 (333)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG--GSCC----CTTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchh--hHhh----cCCceEEEEeCCCHHHHHHHHhccCCcEEE
Confidence            6899999999999999999999999999999998643211  1111    13789999999999999999987  99999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchh
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLW  158 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  158 (305)
                      |+|+..... ....+.  +++|+.++.+++++|.+. ++++|||+||.++|+..+.... .+++|++  .|.     .+.
T Consensus        95 h~A~~~~~~-~~~~~~--~~~N~~~~~~l~~a~~~~-~~~~iV~~SS~~~~g~~~~~~~-~~~~E~~--~p~-----~~~  162 (333)
T 2q1w_A           95 HTAASYKDP-DDWYND--TLTNCVGGSNVVQAAKKN-NVGRFVYFQTALCYGVKPIQQP-VRLDHPR--NPA-----NSS  162 (333)
T ss_dssp             ECCCCCSCT-TCHHHH--HHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGGCSCCCSSS-BCTTSCC--CCT-----TCH
T ss_pred             ECceecCCC-ccCChH--HHHHHHHHHHHHHHHHHh-CCCEEEEECcHHHhCCCcccCC-CCcCCCC--CCC-----CCc
Confidence            999987643 223333  899999999999999998 8899999999998762211111 2677776  221     056


Q ss_pred             HHHHHHHHHHHHHH-HHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCC-CCCccceeHHHHHHHHHHh
Q 039049          159 YAYAKTIAEKEAWR-IAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYP-NTTVGFVHIDDVVGAHILA  236 (305)
Q Consensus       159 Y~~sK~~~E~~~~~-~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~v~D~a~~~~~~  236 (305)
                      |+.+|.++|.+++. +.     +++++||+++|||+..  ......++.....+. ..++ ...++|+|++|+|++++.+
T Consensus       163 Y~~sK~~~E~~~~~s~~-----~~~ilR~~~v~gp~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~Dva~ai~~~  234 (333)
T 2q1w_A          163 YAISKSANEDYLEYSGL-----DFVTFRLANVVGPRNV--SGPLPIFFQRLSEGK-KCFVTKARRDFVFVKDLARATVRA  234 (333)
T ss_dssp             HHHHHHHHHHHHHHHTC-----CEEEEEESEEESTTCC--SSHHHHHHHHHHTTC-CCEEEECEECEEEHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhhhC-----CeEEEeeceEECcCCc--CcHHHHHHHHHHcCC-eeeCCCceEeeEEHHHHHHHHHHH
Confidence            99999999999876 43     8999999999999821  223344555555555 3333 3478999999999999999


Q ss_pred             hcccccCceEEEe-cCCcCHHHHHHHHHHhCCCCCCCCCCC---CCCCCCCCcccchhHHHHhCCCccc-cCCC
Q 039049          237 MEETRASGRLICS-SSVAHWSPIIEMLKATYPSYPYESKCS---KQEGDNSPHSMDTSKLFELGFVGFK-SVPQ  305 (305)
Q Consensus       237 ~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~lg~~~~~-~l~e  305 (305)
                      ++++. ++.||++ +..+|+.|+++.+.+.+|..++...+.   ..........+|++|++++|| +|. +|+|
T Consensus       235 ~~~~~-g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~G~-~p~~~~~~  306 (333)
T 2q1w_A          235 VDGVG-HGAYHFSSGTDVAIKELYDAVVEAMALPSYPEPEIRELGPDDAPSILLDPSRTIQDFGK-IEFTPLKE  306 (333)
T ss_dssp             HTTCC-CEEEECSCSCCEEHHHHHHHHHHHTTCSSCCCCEEEECCTTSCCCCCBCCHHHHHHHCC-CCCCCHHH
T ss_pred             HhcCC-CCEEEeCCCCCccHHHHHHHHHHHhCCCCceeCCCCCcccccccccccCCHHHHHhcCC-CcCCCHHH
Confidence            98876 7789996 578999999999999997541111111   011122567899999999999 886 7653

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=100.00  E-value=9.3e-41  Score=282.53  Aligned_cols=258  Identities=12%  Similarity=0.043  Sum_probs=206.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi~   79 (305)
                      |+|||||||||||++|++.|+++|++|++++|+                       .+|+.|.+.+.++++  ++|+|||
T Consensus        13 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~Dl~d~~~~~~~~~~~~~d~vih   69 (292)
T 1vl0_A           13 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQ-----------------------DLDITNVLAVNKFFNEKKPNVVIN   69 (292)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT-----------------------TCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             ceEEEECCCChHHHHHHHHHHhCCCeEEeccCc-----------------------cCCCCCHHHHHHHHHhcCCCEEEE
Confidence            689999999999999999999999999999885                       269999999999998  7999999


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhH
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWY  159 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y  159 (305)
                      +|+......+...+...+++|+.++.+++++|++. ++ +|||+||.++|+...    ..+++|+++..|.      +.|
T Consensus        70 ~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~-~iv~~SS~~v~~~~~----~~~~~E~~~~~~~------~~Y  137 (292)
T 1vl0_A           70 CAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSV-GA-EIVQISTDYVFDGEA----KEPITEFDEVNPQ------SAY  137 (292)
T ss_dssp             CCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGSCSCC----SSCBCTTSCCCCC------SHH
T ss_pred             CCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEechHHeECCCC----CCCCCCCCCCCCc------cHH
Confidence            99976532223456778999999999999999998 77 999999999887643    2588999887776      789


Q ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCC-CCCCCccceeHHHHHHHHHHhhc
Q 039049          160 AYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGE-YPNTTVGFVHIDDVVGAHILAME  238 (305)
Q Consensus       160 ~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~~~~~  238 (305)
                      +.+|..+|.+++.+    +.+++++||+.+||+ ..   .....++.....+.... .++..++|+|++|+|++++.+++
T Consensus       138 ~~sK~~~E~~~~~~----~~~~~~lR~~~v~G~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  209 (292)
T 1vl0_A          138 GKTKLEGENFVKAL----NPKYYIVRTAWLYGD-GN---NFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVID  209 (292)
T ss_dssp             HHHHHHHHHHHHHH----CSSEEEEEECSEESS-SS---CHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhh----CCCeEEEeeeeeeCC-Cc---ChHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHHHHHh
Confidence            99999999999765    357999999999999 22   23334455555555432 35567999999999999999998


Q ss_pred             ccccCceEEEe-cCCcCHHHHHHHHHHhCCCCC----CCCCCC-CCCCCCCCcccchhHHHH-hCCCccccCC
Q 039049          239 ETRASGRLICS-SSVAHWSPIIEMLKATYPSYP----YESKCS-KQEGDNSPHSMDTSKLFE-LGFVGFKSVP  304 (305)
Q Consensus       239 ~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~-lg~~~~~~l~  304 (305)
                      ++ .++.||++ ++.+|+.|+++.+.+.+|...    ++.... ..........+|++|+++ ||| +|++|+
T Consensus       210 ~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~-~p~~~~  280 (292)
T 1vl0_A          210 EK-NYGTFHCTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSVLRNYMLELTTGD-ITREWK  280 (292)
T ss_dssp             HT-CCEEEECCCBSCEEHHHHHHHHHHHHCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHTTCC-CCCBHH
T ss_pred             cC-CCcEEEecCCCCccHHHHHHHHHHHhCCCCceeeccccccCcccCCCccccccHHHHHHHcCC-CCCCHH
Confidence            86 67789996 578999999999999987531    121111 112234567899999999 999 887664

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=100.00  E-value=1e-39  Score=304.72  Aligned_cols=291  Identities=17%  Similarity=0.220  Sum_probs=220.8

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHc-CCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcch-HHHHhcCCCEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDK-GHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGS-FDEAIQGVDGVF   78 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~-~~~~~~~~d~Vi   78 (305)
                      ||+||||||+||||++|+++|++. |++|++++|+.......   .    ...+++++.+|+.|.++ +.++++++|+||
T Consensus       315 ~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~---~----~~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vi  387 (660)
T 1z7e_A          315 RTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF---L----NHPHFHFVEGDISIHSEWIEYHVKKCDVVL  387 (660)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGG---T----TCTTEEEEECCTTTCHHHHHHHHHHCSEEE
T ss_pred             CceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhh---c----cCCceEEEECCCCCcHHHHHHhhcCCCEEE
Confidence            478999999999999999999998 89999999987543221   0    12478999999999765 777888999999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccc-cccch
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYC-KHYNL  157 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~-~~~~~  157 (305)
                      |+|+......+..++...+++|+.++.+++++|.+. + ++|||+||.++|+....    .+++|+++..+..+ ..+.+
T Consensus       388 h~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-~-~r~V~~SS~~vyg~~~~----~~~~E~~~~~~~~p~~~p~~  461 (660)
T 1z7e_A          388 PLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPSTSEVYGMCSD----KYFDEDHSNLIVGPVNKPRW  461 (660)
T ss_dssp             ECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECCGGGGBTCCS----SSBCTTTCCEEECCTTCTTH
T ss_pred             ECceecCccccccCHHHHHHhhhHHHHHHHHHHHHh-C-CEEEEEecHHHcCCCCC----cccCCCccccccCcccCCCC
Confidence            999986543233456678999999999999999998 7 89999999998876432    56788875321111 01126


Q ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCC-------CCCchHHHHHHHHhcCCCCC---CCCCccceeHH
Q 039049          158 WYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAP-------QPTSTLLLILAMVKGLRGEY---PNTTVGFVHID  227 (305)
Q Consensus       158 ~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~-------~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~v~  227 (305)
                      .|+.+|+++|.+++.++++++++++++||+++||+....       .......++..+..+.+...   ++..++|+|++
T Consensus       462 ~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~  541 (660)
T 1z7e_A          462 IYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIR  541 (660)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHH
T ss_pred             CcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHH
Confidence            799999999999999988889999999999999998542       12234456666667765432   34489999999


Q ss_pred             HHHHHHHHhhcccc---cCceEEEe-cC-CcCHHHHHHHHHHhCCCCC----CCCCCC-----------CCCCCCCCccc
Q 039049          228 DVVGAHILAMEETR---ASGRLICS-SS-VAHWSPIIEMLKATYPSYP----YESKCS-----------KQEGDNSPHSM  287 (305)
Q Consensus       228 D~a~~~~~~~~~~~---~~~~~~~~-~~-~~s~~el~~~i~~~~~~~~----~~~~~~-----------~~~~~~~~~~~  287 (305)
                      |+|++++.+++++.   .++.||++ ++ .+|+.|+++.+.+.+|...    +|....           ..........+
T Consensus       542 Dva~ai~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  621 (660)
T 1z7e_A          542 DGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKP  621 (660)
T ss_dssp             HHHHHHHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCTTGGGSCCCCCEEEECTHHHHCTTCCCCSCCCB
T ss_pred             HHHHHHHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCCcccccCccccccchhccccccccccchhhccc
Confidence            99999999998765   45689996 44 7999999999999886421    121110           01123456788


Q ss_pred             chhHHHH-hCCCccc-cCCC
Q 039049          288 DTSKLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       288 ~~~~~~~-lg~~~~~-~l~e  305 (305)
                      |++|+++ ||| +|+ +|+|
T Consensus       622 d~~ka~~~LG~-~p~~~l~e  640 (660)
T 1z7e_A          622 SIRNAHRCLDW-EPKIDMQE  640 (660)
T ss_dssp             CCHHHHHHHCC-CCCCCHHH
T ss_pred             CHHHHHHhcCC-CccCcHHH
Confidence            9999999 999 986 7653

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.3e-40  Score=287.81  Aligned_cols=284  Identities=17%  Similarity=0.117  Sum_probs=217.1

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcC-------CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKG-------HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-   72 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-   72 (305)
                      ||+||||||+||||++|++.|+++|       ++|++++|+......        ....+++++.+|+.|.+.+.++++ 
T Consensus        14 ~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~--------~~~~~~~~~~~Dl~d~~~~~~~~~~   85 (342)
T 2hrz_A           14 GMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA--------GFSGAVDARAADLSAPGEAEKLVEA   85 (342)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT--------TCCSEEEEEECCTTSTTHHHHHHHT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc--------ccCCceeEEEcCCCCHHHHHHHHhc
Confidence            4689999999999999999999999       899999998653221        013478899999999999999984 


Q ss_pred             CCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCC-----ccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           73 GVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKS-----VKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-----~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      ++|+|||+|+..... ..+.+...+++|+.++.+++++|++. +     +++|||+||.++|+...    ..+++|+++.
T Consensus        86 ~~d~vih~A~~~~~~-~~~~~~~~~~~nv~g~~~l~~~~~~~-~~~~~~~~~iv~~SS~~~~~~~~----~~~~~E~~~~  159 (342)
T 2hrz_A           86 RPDVIFHLAAIVSGE-AELDFDKGYRINLDGTRYLFDAIRIA-NGKDGYKPRVVFTSSIAVFGAPL----PYPIPDEFHT  159 (342)
T ss_dssp             CCSEEEECCCCCHHH-HHHCHHHHHHHHTHHHHHHHHHHHHH-HHHHCCCCEEEEEEEGGGCCSSC----CSSBCTTCCC
T ss_pred             CCCEEEECCccCccc-ccccHHHHHHHHHHHHHHHHHHHHhc-ccccCCCcEEEEeCchHhhCCCC----CCCcCCCCCC
Confidence            899999999976521 23456678999999999999999887 5     78999999999877532    1578999887


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceec-CCCCCCC--CchHHHHHHHHhcCCCC--CC-CCCc
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVG-PLLAPQP--TSTLLLILAMVKGLRGE--YP-NTTV  221 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G-~~~~~~~--~~~~~~~~~~~~~~~~~--~~-~~~~  221 (305)
                      .|.      +.|+.+|.++|.+++.++.+++++.+++|++.+|| |+.....  .....++.....+.+..  .+ +...
T Consensus       160 ~~~------~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (342)
T 2hrz_A          160 TPL------TSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRH  233 (342)
T ss_dssp             CCS------SHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEE
T ss_pred             CCc------chHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccce
Confidence            776      78999999999999999888889999999999998 6543221  12234455566665432  22 3367


Q ss_pred             cceeHHHHHHHHHHhhcccc----cCceEEEecCCcCHHHHHHHHHHhCCCCC--CCCCCCCCC----CCCCCcccchhH
Q 039049          222 GFVHIDDVVGAHILAMEETR----ASGRLICSSSVAHWSPIIEMLKATYPSYP--YESKCSKQE----GDNSPHSMDTSK  291 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~~----~~~~~~~~~~~~s~~el~~~i~~~~~~~~--~~~~~~~~~----~~~~~~~~~~~~  291 (305)
                      +++|++|+|++++.+++.+.    .++.||++++.+|+.|+++.+.+.+|...  .........    .......+|++|
T Consensus       234 ~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k  313 (342)
T 2hrz_A          234 WHASPRSAVGFLIHGAMIDVEKVGPRRNLSMPGLSATVGEQIEALRKVAGEKAVALIRREPNEMIMRMCEGWAPGFEAKR  313 (342)
T ss_dssp             EEECHHHHHHHHHHHHHSCHHHHCSCCEEECCCEEEEHHHHHHHHHHHHCHHHHTTEEECCCHHHHHHHTTSCCCBCCHH
T ss_pred             eeEehHHHHHHHHHHHhccccccCCccEEEcCCCCCCHHHHHHHHHHHcCcccccceeeccCcchhhhhcccccccChHH
Confidence            78999999999999998764    35689998778999999999999986421  111111000    011223689999


Q ss_pred             HHHhCCCccc-cCCC
Q 039049          292 LFELGFVGFK-SVPQ  305 (305)
Q Consensus       292 ~~~lg~~~~~-~l~e  305 (305)
                      +++||| +|+ +|+|
T Consensus       314 ~~~lG~-~p~~~l~e  327 (342)
T 2hrz_A          314 ARELGF-TAESSFEE  327 (342)
T ss_dssp             HHHTTC-CCCSSHHH
T ss_pred             HHHcCC-CCCCCHHH
Confidence            988999 997 7653

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=100.00  E-value=3.8e-39  Score=303.05  Aligned_cols=295  Identities=16%  Similarity=0.155  Sum_probs=216.8

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccc-hhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSK-VGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGV   77 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~V   77 (305)
                      ||+||||||+||||++|++.|+++|++|++++|+...... ...+....  ..+++++.+|+.|.+.+.++++  ++|+|
T Consensus        11 ~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~v~~v~~Dl~d~~~l~~~~~~~~~D~V   88 (699)
T 1z45_A           11 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT--KHHIPFYEVDLCDRKGLEKVFKEYKIDSV   88 (699)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH--TSCCCEEECCTTCHHHHHHHHHHSCCCEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhcc--CCceEEEEcCCCCHHHHHHHHHhCCCCEE
Confidence            3689999999999999999999999999999997653221 11111111  2368899999999999999998  89999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccch
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNL  157 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  157 (305)
                      ||+|+........+.+...+++|+.++.+++++|++. ++++|||+||.++|+.........+++|+++..|.      +
T Consensus        89 ih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~------~  161 (699)
T 1z45_A           89 IHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-NVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPT------N  161 (699)
T ss_dssp             EECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCC------S
T ss_pred             EECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEECcHHHhCCCccccccCCccccCCCCCC------C
Confidence            9999986532222344568899999999999999998 88999999999988754221112567888777665      7


Q ss_pred             hHHHHHHHHHHHHHHHHHH--cCCcEEEEecCceecCCCCCC--------CCchHHHHHHHHhc--CCCC-CC-------
Q 039049          158 WYAYAKTIAEKEAWRIAKD--CGIDMVVVNPSFVVGPLLAPQ--------PTSTLLLILAMVKG--LRGE-YP-------  217 (305)
Q Consensus       158 ~Y~~sK~~~E~~~~~~~~~--~~~~~~i~Rp~~v~G~~~~~~--------~~~~~~~~~~~~~~--~~~~-~~-------  217 (305)
                      .|+.+|.++|.+++.++.+  .+++++++||+++||+.....        ......++.....+  .++. ++       
T Consensus       162 ~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  241 (699)
T 1z45_A          162 PYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRD  241 (699)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CC
T ss_pred             hHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCC
Confidence            8999999999999998777  699999999999999863210        11223334444433  2332 22       


Q ss_pred             -CCCccceeHHHHHHHHHHhhccc-------ccCceEEEe-cCCcCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCcccc
Q 039049          218 -NTTVGFVHIDDVVGAHILAMEET-------RASGRLICS-SSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMD  288 (305)
Q Consensus       218 -~~~~~~i~v~D~a~~~~~~~~~~-------~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (305)
                       ...++|||++|+|++++.+++..       ..++.||++ ++.+|+.|+++.+.+.+|..........+..+.....+|
T Consensus       242 g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d  321 (699)
T 1z45_A          242 GTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGRRAGDVLNLTAK  321 (699)
T ss_dssp             SSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC---------CCCCCBC
T ss_pred             CCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCCCceecCCCCCccccccCC
Confidence             33799999999999999998753       123579995 678999999999999986531111112233345568899


Q ss_pred             hhHHHH-hCCCccc-cCCC
Q 039049          289 TSKLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       289 ~~~~~~-lg~~~~~-~l~e  305 (305)
                      ++|+++ ||| +|+ +|+|
T Consensus       322 ~~ka~~~LG~-~p~~~l~e  339 (699)
T 1z45_A          322 PDRAKRELKW-QTELQVED  339 (699)
T ss_dssp             CHHHHHHTCC-CCCCCHHH
T ss_pred             HHHHHHhcCC-CCCCCHHH
Confidence            999999 999 986 7653

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=100.00  E-value=8.6e-39  Score=271.23  Aligned_cols=265  Identities=20%  Similarity=0.210  Sum_probs=195.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      |||||||||||||++|+++|+++||+|++++|++...              .   +..|    +...+.++++|+|||+|
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~--------------~---~~~~----~~~~~~l~~~d~vihla   59 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG--------------R---ITWD----ELAASGLPSCDAAVNLA   59 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT--------------E---EEHH----HHHHHCCCSCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC--------------e---eecc----hhhHhhccCCCEEEEec
Confidence            6799999999999999999999999999999986521              1   1222    12234567899999999


Q ss_pred             cccccC----CCCchhhhhhhhhHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccc
Q 039049           82 SPVLVP----YDNNIQATLIDPCIKGTLNVLSSCKKAK-SVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYN  156 (305)
Q Consensus        82 ~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  156 (305)
                      +.....    ........+++.|+.++.+|+++++..+ ..++||+.||.++|+....    .+.+|+++..+.      
T Consensus        60 ~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~----~~~~E~~p~~~~------  129 (298)
T 4b4o_A           60 GENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLT----AEYDEDSPGGDF------  129 (298)
T ss_dssp             CCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSS----CCBCTTCCCSCS------
T ss_pred             cCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCC----CcccccCCcccc------
Confidence            854321    1234456688999999999999998872 3345899999998876543    678898887776      


Q ss_pred             hhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCC--CCccceeHHHHHHHHH
Q 039049          157 LWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPN--TTVGFVHIDDVVGAHI  234 (305)
Q Consensus       157 ~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~~~  234 (305)
                      +.|+..|...|....  ....+++++++||+.+|||+.    .....++.....+....+++  ..++|||++|+|+++.
T Consensus       130 ~~~~~~~~~~e~~~~--~~~~~~~~~~~r~~~v~g~~~----~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~  203 (298)
T 4b4o_A          130 DFFSNLVTKWEAAAR--LPGDSTRQVVVRSGVVLGRGG----GAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILT  203 (298)
T ss_dssp             SHHHHHHHHHHHHHC--CSSSSSEEEEEEECEEECTTS----HHHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHH--hhccCCceeeeeeeeEEcCCC----CchhHHHHHHhcCCcceecccCceeecCcHHHHHHHHH
Confidence            678888887776432  245689999999999999963    22233444444555444444  4899999999999999


Q ss_pred             HhhcccccCceEEEe-cCCcCHHHHHHHHHHhCCCC---CCCCCCCC-------CCCCCCCcccchhHHHHhCCCccc--
Q 039049          235 LAMEETRASGRLICS-SSVAHWSPIIEMLKATYPSY---PYESKCSK-------QEGDNSPHSMDTSKLFELGFVGFK--  301 (305)
Q Consensus       235 ~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~---~~~~~~~~-------~~~~~~~~~~~~~~~~~lg~~~~~--  301 (305)
                      .+++++...+.||++ ++++|++|+++.+++.+|+.   ++|.+..+       ......+..++++|++++|| +++  
T Consensus       204 ~~~~~~~~~g~yn~~~~~~~t~~e~~~~ia~~lgrp~~~pvP~~~~~~~~g~~~~~~~l~~~rv~~~kl~~~Gf-~f~yp  282 (298)
T 4b4o_A          204 HALEANHVHGVLNGVAPSSATNAEFAQTFGAALGRRAFIPLPSAVVQAVFGRQRAIMLLEGQKVIPRRTLATGY-QYSFP  282 (298)
T ss_dssp             HHHHCTTCCEEEEESCSCCCBHHHHHHHHHHHHTCCCCCCBCHHHHHHHHCHHHHHHHHCCCCBCCHHHHHTTC-CCSCC
T ss_pred             HHHhCCCCCCeEEEECCCccCHHHHHHHHHHHhCcCCcccCCHHHHHHHhcchhHHHhhCCCEEcHHHHHHCCC-CCCCC
Confidence            999998888899995 67899999999999999753   23322111       00011345678899999999 887  


Q ss_pred             cCC
Q 039049          302 SVP  304 (305)
Q Consensus       302 ~l~  304 (305)
                      +|+
T Consensus       283 ~l~  285 (298)
T 4b4o_A          283 ELG  285 (298)
T ss_dssp             SHH
T ss_pred             CHH
Confidence            454

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=100.00  E-value=4.7e-38  Score=263.33  Aligned_cols=260  Identities=14%  Similarity=0.095  Sum_probs=202.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcC--CCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQG--VDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~Vi~   79 (305)
                      |+|+||||+||||+++++.|+ +|++|++++|++...             .+   +.+|+.|++.+.+++++  +|+|||
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~-------------~~---~~~Dl~~~~~~~~~~~~~~~d~vi~   63 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ-------------GG---YKLDLTDFPRLEDFIIKKRPDVIIN   63 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT-------------TC---EECCTTSHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC-------------CC---ceeccCCHHHHHHHHHhcCCCEEEE
Confidence            479999999999999999999 489999999986421             12   78999999999999885  999999


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhH
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWY  159 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y  159 (305)
                      +|+........+.+...+++|+.++.+++++|++. ++ +|||+||.++|++..     .+++|+++..|.      +.|
T Consensus        64 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~iv~~SS~~~~~~~~-----~~~~e~~~~~~~------~~Y  130 (273)
T 2ggs_A           64 AAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVI-DS-YIVHISTDYVFDGEK-----GNYKEEDIPNPI------NYY  130 (273)
T ss_dssp             CCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TC-EEEEEEEGGGSCSSS-----CSBCTTSCCCCS------SHH
T ss_pred             CCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHh-CC-eEEEEecceeEcCCC-----CCcCCCCCCCCC------CHH
Confidence            99986532223456778999999999999999988 75 999999999876532     478888887765      789


Q ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCC-CCCCCccceeHHHHHHHHHHhhc
Q 039049          160 AYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGE-YPNTTVGFVHIDDVVGAHILAME  238 (305)
Q Consensus       160 ~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~~~~~  238 (305)
                      +.+|.++|.+++.      ++++++||+.+||+.     .....++.....+.... .++ .++++|++|+|++++.+++
T Consensus       131 ~~sK~~~e~~~~~------~~~~~iR~~~v~G~~-----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~i~~~~~  198 (273)
T 2ggs_A          131 GLSKLLGETFALQ------DDSLIIRTSGIFRNK-----GFPIYVYKTLKEGKTVFAFKG-YYSPISARKLASAILELLE  198 (273)
T ss_dssp             HHHHHHHHHHHCC------TTCEEEEECCCBSSS-----SHHHHHHHHHHTTCCEEEESC-EECCCBHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhC------CCeEEEecccccccc-----HHHHHHHHHHHcCCCEEeecC-CCCceEHHHHHHHHHHHHh
Confidence            9999999998865      688999999999821     22233334444554432 234 7899999999999999998


Q ss_pred             ccccCceEEEecCCcCHHHHHHHHHHhCCCCCC---CCCC-CCCCCCCCCcccchhHHHH-hCCCcc-c-cCCC
Q 039049          239 ETRASGRLICSSSVAHWSPIIEMLKATYPSYPY---ESKC-SKQEGDNSPHSMDTSKLFE-LGFVGF-K-SVPQ  305 (305)
Q Consensus       239 ~~~~~~~~~~~~~~~s~~el~~~i~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~-lg~~~~-~-~l~e  305 (305)
                      ++. ++.||++++.+|+.|+++.+.+.+|....   +... ...........+|++|+++ ||| +| . +|+|
T Consensus       199 ~~~-~g~~~i~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~-~p~~~~l~~  270 (273)
T 2ggs_A          199 LRK-TGIIHVAGERISRFELALKIKEKFNLPGEVKEVDEVRGWIAKRPYDSSLDSSRARKILST-DFYTLDLDG  270 (273)
T ss_dssp             HTC-CEEEECCCCCEEHHHHHHHHHHHTTCCSCEEEESSCTTCCSCCCSBCCBCCHHHHHHCSS-CCCSCCGGG
T ss_pred             cCc-CCeEEECCCcccHHHHHHHHHHHhCCChhhcccccccccccCCCcccccCHHHHHHHhCC-CCCCccccc
Confidence            764 56899966889999999999999975311   1111 1122234567899999999 999 88 4 7764

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=100.00  E-value=3.9e-38  Score=285.94  Aligned_cols=269  Identities=17%  Similarity=0.156  Sum_probs=195.1

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ||+||||||+||||++|++.|++.|++|++++|+..+.                ..+.+|+.+.  +.++++++|+|||+
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~----------------~~v~~d~~~~--~~~~l~~~D~Vih~  208 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP----------------GKRFWDPLNP--ASDLLDGADVLVHL  208 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT----------------TCEECCTTSC--CTTTTTTCSEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc----------------cceeecccch--hHHhcCCCCEEEEC
Confidence            68999999999999999999999999999999987632                1256777643  45667899999999


Q ss_pred             ccccccCC-CCchhhhhhhhhHHHHHHHHHH-HHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchh
Q 039049           81 ASPVLVPY-DNNIQATLIDPCIKGTLNVLSS-CKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLW  158 (305)
Q Consensus        81 a~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~-~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  158 (305)
                      |+...... ..+.+..++++|+.++.+++++ ++.. ++++|||+||.++|+....   ..+++|+++. +.      +.
T Consensus       209 A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~-~~~r~V~~SS~~vyg~~~~---~~~~~E~~~~-~~------~~  277 (516)
T 3oh8_A          209 AGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAEST-QCTTMISASAVGFYGHDRG---DEILTEESES-GD------DF  277 (516)
T ss_dssp             CCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCS-SCCEEEEEEEGGGGCSEEE---EEEECTTSCC-CS------SH
T ss_pred             CCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcC-CCCEEEEeCcceEecCCCC---CCccCCCCCC-Cc------Ch
Confidence            99865432 3456677899999999999999 4555 8899999999998873221   2678888876 33      77


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCC--CCccceeHHHHHHHHHHh
Q 039049          159 YAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPN--TTVGFVHIDDVVGAHILA  236 (305)
Q Consensus       159 Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~~~~~  236 (305)
                      |+.+|...|.++.. ....+++++++||+++||++.    .....++.....+....+++  ..++|||++|+|++++.+
T Consensus       278 y~~~~~~~E~~~~~-~~~~gi~~~ilRp~~v~Gp~~----~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~  352 (516)
T 3oh8_A          278 LAEVCRDWEHATAP-ASDAGKRVAFIRTGVALSGRG----GMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRA  352 (516)
T ss_dssp             HHHHHHHHHHTTHH-HHHTTCEEEEEEECEEEBTTB----SHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH-HHhCCCCEEEEEeeEEECCCC----ChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHH
Confidence            99999999987654 456799999999999999973    22222333333333333443  479999999999999999


Q ss_pred             hcccccCceEEEe-cCCcCHHHHHHHHHHhCCCC---CCCCCCCCC--------CCCCCCcccchhHHHHhCCCccc-c-
Q 039049          237 MEETRASGRLICS-SSVAHWSPIIEMLKATYPSY---PYESKCSKQ--------EGDNSPHSMDTSKLFELGFVGFK-S-  302 (305)
Q Consensus       237 ~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~---~~~~~~~~~--------~~~~~~~~~~~~~~~~lg~~~~~-~-  302 (305)
                      ++++...+.||++ ++.+|+.|+++.+.+.+|..   ++|.+..+.        ........++++|+++||| +|+ + 
T Consensus       353 l~~~~~~g~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~kl~~lG~-~~~~~~  431 (516)
T 3oh8_A          353 IVDAQISGPINAVAPNPVSNADMTKILATSMHRPAFIQIPSLGPKILLGSQGAEELALASQRTAPAALENLSH-TFRYTD  431 (516)
T ss_dssp             HHCTTCCEEEEESCSCCEEHHHHHHHTTC---------------------CCGGGGGGCEEEECCHHHHHTTC-CCSCSS
T ss_pred             HhCcccCCcEEEECCCCCCHHHHHHHHHHHhCCCCCCCCCHHHHHHHhCCchhHHHhhcCCeechHHHHHCCC-CCCCCC
Confidence            9988777899985 67899999999999998753   223221111        0112345678899999999 887 4 


Q ss_pred             CC
Q 039049          303 VP  304 (305)
Q Consensus       303 l~  304 (305)
                      |+
T Consensus       432 l~  433 (516)
T 3oh8_A          432 IG  433 (516)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=100.00  E-value=1.6e-36  Score=264.36  Aligned_cols=243  Identities=15%  Similarity=0.079  Sum_probs=190.0

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcC-----CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcC--
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKG-----HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQG--   73 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--   73 (305)
                      .|+|||||||||||++|+++|+++|     ++|++++|++....    +     ...+++++.+|+.|.+.+.+++++  
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~----~-----~~~~~~~~~~Dl~d~~~~~~~~~~~~   71 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW----H-----EDNPINYVQCDISDPDDSQAKLSPLT   71 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC----C-----CSSCCEEEECCTTSHHHHHHHHTTCT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc----c-----ccCceEEEEeecCCHHHHHHHHhcCC
Confidence            4789999999999999999999999     99999999876432    0     123789999999999999999987  


Q ss_pred             -CCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcC-CccEEE-------EeccceeeeccCCCCCCcccCCC
Q 039049           74 -VDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAK-SVKRVV-------LTSSCSSIRYRHDAQQVSPLNES  144 (305)
Q Consensus        74 -~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v-------~~SS~~~~~~~~~~~~~~~~~E~  144 (305)
                       +|+|||+|+...     .++...+++|+.++.+++++|++.. ++++||       |+||.++|+.....  ..+++|+
T Consensus        72 ~~d~vih~a~~~~-----~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~--~~~~~E~  144 (364)
T 2v6g_A           72 DVTHVFYVTWANR-----STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESH--DPPYTED  144 (364)
T ss_dssp             TCCEEEECCCCCC-----SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCC--CSSBCTT
T ss_pred             CCCEEEECCCCCc-----chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccC--CCCCCcc
Confidence             999999999753     3456689999999999999998762 588998       89999888764211  2578888


Q ss_pred             CCCCcccccccchhHHHHHHHHHHHHHHHHHHcC-CcEEEEecCceecCCCCCCCCch-HH-HHHHH--HhcCCCC-CCC
Q 039049          145 HWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCG-IDMVVVNPSFVVGPLLAPQPTST-LL-LILAM--VKGLRGE-YPN  218 (305)
Q Consensus       145 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~-~~~~i~Rp~~v~G~~~~~~~~~~-~~-~~~~~--~~~~~~~-~~~  218 (305)
                      ++..|..     +.|    +.+|++++.++++++ ++++++||+++|||+........ .. ++...  ..+.+.. .++
T Consensus       145 ~~~~~~~-----~~y----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~  215 (364)
T 2v6g_A          145 LPRLKYM-----NFY----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGC  215 (364)
T ss_dssp             SCCCSSC-----CHH----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSC
T ss_pred             ccCCccc-----hhh----HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCC
Confidence            8766521     567    458999988877676 99999999999999875432321 22 22333  2465544 343


Q ss_pred             C-----CccceeHHHHHHHHHHhhcccc-cCceEEEe-cCCcCHHHHHHHHHHhCCC
Q 039049          219 T-----TVGFVHIDDVVGAHILAMEETR-ASGRLICS-SSVAHWSPIIEMLKATYPS  268 (305)
Q Consensus       219 ~-----~~~~i~v~D~a~~~~~~~~~~~-~~~~~~~~-~~~~s~~el~~~i~~~~~~  268 (305)
                      +     ..+++|++|+|++++.+++++. .++.||++ ++.+|+.|+++.+.+.+|.
T Consensus       216 ~~~~~~~~~~~~v~Dva~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~  272 (364)
T 2v6g_A          216 KAAWDGYSDCSDADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGV  272 (364)
T ss_dssp             HHHHHSCBCCEEHHHHHHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTC
T ss_pred             cccccccCCCCcHHHHHHHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCC
Confidence            2     4788899999999999998875 45589996 5689999999999999874

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=4.3e-37  Score=250.59  Aligned_cols=221  Identities=22%  Similarity=0.255  Sum_probs=174.3

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ||+||||||+||||++|++.|+++|++|++++|++.+....         ..+++++++|+.|.+++.++++++|+|||+
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~   74 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE---------NEHLKVKKADVSSLDEVCEVCKGADAVISA   74 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC---------CTTEEEECCCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc---------cCceEEEEecCCCHHHHHHHhcCCCEEEEe
Confidence            67999999999999999999999999999999987643321         147899999999999999999999999999


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHH
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYA  160 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  160 (305)
                      |+...     +.. ..+++|+.++.++++++++. ++++|||+||.++++....     ...|+++..|.      +.|+
T Consensus        75 a~~~~-----~~~-~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~~~~-----~~~~~~~~~p~------~~Y~  136 (227)
T 3dhn_A           75 FNPGW-----NNP-DIYDETIKVYLTIIDGVKKA-GVNRFLMVGGAGSLFIAPG-----LRLMDSGEVPE------NILP  136 (227)
T ss_dssp             CCC------------CCSHHHHHHHHHHHHHHHT-TCSEEEEECCSTTSEEETT-----EEGGGTTCSCG------GGHH
T ss_pred             CcCCC-----CCh-hHHHHHHHHHHHHHHHHHHh-CCCEEEEeCChhhccCCCC-----CccccCCcchH------HHHH
Confidence            98753     122 27899999999999999998 8999999999988776532     23445555555      7899


Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhccc
Q 039049          161 YAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       161 ~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  240 (305)
                      .+|..+|.+++.+.++++++++++||+.+||++.......        ..+.........++|+|++|+|++++.+++++
T Consensus       137 ~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~--------~~~~~~~~~~~~~~~i~~~Dva~ai~~~l~~~  208 (227)
T 3dhn_A          137 GVKALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRTGRYR--------LGKDDMIVDIVGNSHISVEDYAAAMIDELEHP  208 (227)
T ss_dssp             HHHHHHHHHHHTGGGCCSSEEEEEECCSEEESCCCCCCCE--------EESSBCCCCTTSCCEEEHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHHhhccCccEEEEeCCcccCCCcccccee--------ecCCCcccCCCCCcEEeHHHHHHHHHHHHhCc
Confidence            9999999999888777899999999999999986543211        01122222222489999999999999999998


Q ss_pred             cc-CceEEEe-cCCcCHH
Q 039049          241 RA-SGRLICS-SSVAHWS  256 (305)
Q Consensus       241 ~~-~~~~~~~-~~~~s~~  256 (305)
                      .. +..|+++ +++.++.
T Consensus       209 ~~~g~~~~~~~~~~~~~~  226 (227)
T 3dhn_A          209 KHHQERFTIGYLEHHHHH  226 (227)
T ss_dssp             CCCSEEEEEECCSCCC--
T ss_pred             cccCcEEEEEeehhcccC
Confidence            75 5579986 4566664

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=100.00  E-value=8.4e-37  Score=274.68  Aligned_cols=256  Identities=15%  Similarity=0.119  Sum_probs=194.2

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHc---CCeEEEEEeCCCcccchhhhhhccC-------------ccCceEEEEccCC--
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDK---GHMVRTTVRDPEDLSKVGFLWELNG-------------AEERLKIMKADLL--   62 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~---g~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~~~D~~--   62 (305)
                      ||+||||||+||||++|+++|++.   |++|++++|+.........+.....             ...+++++.+|+.  
T Consensus        73 ~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~~~  152 (478)
T 4dqv_A           73 LRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSEP  152 (478)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTTSG
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECCCc
Confidence            689999999999999999999999   8999999998765433222222111             1248999999998  


Q ss_pred             ----CcchHHHHhcCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCC
Q 039049           63 ----MEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQV  138 (305)
Q Consensus        63 ----d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~  138 (305)
                          |.+.+.++++++|+|||+|+....    .++...+++|+.++.+++++|.+. ++++|||+||.++|+....    
T Consensus       153 ~~gld~~~~~~~~~~~D~Vih~Aa~~~~----~~~~~~~~~Nv~gt~~ll~aa~~~-~~~~~V~iSS~~v~~~~~~----  223 (478)
T 4dqv_A          153 DLGLDQPMWRRLAETVDLIVDSAAMVNA----FPYHELFGPNVAGTAELIRIALTT-KLKPFTYVSTADVGAAIEP----  223 (478)
T ss_dssp             GGGCCHHHHHHHHHHCCEEEECCSSCSB----SSCCEEHHHHHHHHHHHHHHHTSS-SCCCEEEEEEGGGGTTSCT----
T ss_pred             ccCCCHHHHHHHHcCCCEEEECccccCC----cCHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeehhhcCccCC----
Confidence                566788899999999999998764    455568899999999999999988 8999999999988765322    


Q ss_pred             cccCCCCCCCcccc-----cccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCC---CC-chHHHHHHHH
Q 039049          139 SPLNESHWSDPDYC-----KHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQ---PT-STLLLILAMV  209 (305)
Q Consensus       139 ~~~~E~~~~~~~~~-----~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~---~~-~~~~~~~~~~  209 (305)
                      .+++|+++..|..+     ....+.|+.+|+++|.+++.++++.+++++++||++|||+.....   .. ....++....
T Consensus       224 ~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~  303 (478)
T 4dqv_A          224 SAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLM  303 (478)
T ss_dssp             TTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHH
T ss_pred             CCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHH
Confidence            57788776544311     011145999999999999999888899999999999999854211   11 2223333333


Q ss_pred             h-cCC-CCC---------CCCCccceeHHHHHHHHHHhhcc----c-ccCceEEEe-cCC--cCHHHHHHHHHHh
Q 039049          210 K-GLR-GEY---------PNTTVGFVHIDDVVGAHILAMEE----T-RASGRLICS-SSV--AHWSPIIEMLKAT  265 (305)
Q Consensus       210 ~-~~~-~~~---------~~~~~~~i~v~D~a~~~~~~~~~----~-~~~~~~~~~-~~~--~s~~el~~~i~~~  265 (305)
                      . |.. ..+         ++..++|+|++|+|++++.++.+    + ..++.||++ ++.  +|+.|+++.+.+.
T Consensus       304 ~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~  378 (478)
T 4dqv_A          304 ATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA  378 (478)
T ss_dssp             HHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT
T ss_pred             HcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc
Confidence            3 321 111         13478999999999999999875    3 335679996 455  9999999999996

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=100.00  E-value=5.5e-37  Score=264.81  Aligned_cols=234  Identities=19%  Similarity=0.217  Sum_probs=188.2

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHc-CC-eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDK-GH-MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~-g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      +|+||||||+||||++|++.|++. |+ +|++++|++.+......  ...  ..++.++.+|+.|.+.+.++++++|+||
T Consensus        21 ~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~--~~~--~~~v~~~~~Dl~d~~~l~~~~~~~D~Vi   96 (344)
T 2gn4_A           21 NQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAM--EFN--DPRMRFFIGDVRDLERLNYALEGVDICI   96 (344)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHH--HHC--CTTEEEEECCTTCHHHHHHHTTTCSEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHH--Hhc--CCCEEEEECCCCCHHHHHHHHhcCCEEE
Confidence            378999999999999999999999 97 99999997653322111  111  2478999999999999999999999999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchh
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLW  158 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  158 (305)
                      |+||..........+...+++|+.++.+++++|.+. ++++||++||..++.+                  .      +.
T Consensus        97 h~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~-~v~~~V~~SS~~~~~p------------------~------~~  151 (344)
T 2gn4_A           97 HAAALKHVPIAEYNPLECIKTNIMGASNVINACLKN-AISQVIALSTDKAANP------------------I------NL  151 (344)
T ss_dssp             ECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEECCGGGSSC------------------C------SH
T ss_pred             ECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhC-CCCEEEEecCCccCCC------------------c------cH
Confidence            999986533223445678999999999999999998 8999999999764321                  1      67


Q ss_pred             HHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcC-CCCC--CCCCccceeHHHHHHH
Q 039049          159 YAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGL-RGEY--PNTTVGFVHIDDVVGA  232 (305)
Q Consensus       159 Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~i~v~D~a~~  232 (305)
                      |+.+|.++|.+++.++.+   .+++++++||+++||+..    .....++..+..+. ++.+  +...++|+|++|+|++
T Consensus       152 Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~----~~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~  227 (344)
T 2gn4_A          152 YGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRG----SVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSF  227 (344)
T ss_dssp             HHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTT----SHHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCC----CHHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHH
Confidence            999999999999887654   579999999999999863    23344556666665 4333  3447899999999999


Q ss_pred             HHHhhcccccCceEEEecCCcCHHHHHHHHHHhCC
Q 039049          233 HILAMEETRASGRLICSSSVAHWSPIIEMLKATYP  267 (305)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~~  267 (305)
                      ++.+++++..+..|++++..+|+.|+++.+.+..+
T Consensus       228 v~~~l~~~~~g~~~~~~~~~~s~~el~~~i~~~~~  262 (344)
T 2gn4_A          228 VLKSLKRMHGGEIFVPKIPSMKMTDLAKALAPNTP  262 (344)
T ss_dssp             HHHHHHHCCSSCEEEECCCEEEHHHHHHHHCTTCC
T ss_pred             HHHHHhhccCCCEEecCCCcEEHHHHHHHHHHhCC
Confidence            99999987666789987778999999999987663

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=100.00  E-value=1.7e-36  Score=269.64  Aligned_cols=255  Identities=13%  Similarity=0.120  Sum_probs=191.8

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhh----------ccCccCceEEEEccCCCcchHHHH
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWE----------LNGAEERLKIMKADLLMEGSFDEA   70 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~~~~~~D~~d~~~~~~~   70 (305)
                      ||+||||||+||||++|+++|++.|++|++++|++........+..          ......++.++.+|+.|++.+. .
T Consensus        69 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~  147 (427)
T 4f6c_A           69 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-L  147 (427)
T ss_dssp             CEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC-C
T ss_pred             CCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC-C
Confidence            4689999999999999999999999999999999873322221111          0011348999999999988887 7


Q ss_pred             hcCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccC-CCCCCcccCCCCCCCc
Q 039049           71 IQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRH-DAQQVSPLNESHWSDP  149 (305)
Q Consensus        71 ~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~-~~~~~~~~~E~~~~~~  149 (305)
                      +.++|+|||||+....   ...+...+++|+.++.+++++|.+  ++++|||+||.++ +... ......+++|+++..+
T Consensus       148 ~~~~d~Vih~A~~~~~---~~~~~~~~~~Nv~g~~~l~~aa~~--~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~~~  221 (427)
T 4f6c_A          148 PENMDTIIHAGARTDH---FGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKG  221 (427)
T ss_dssp             SSCCSEEEECCCCC----------CHHHHHHHHHHHHHHHHHH--TTCEEEEEEEGGG-GSEECSSCSCCEECTTCSCSS
T ss_pred             cCCCCEEEECCcccCC---CCCHHHHHHHHHHHHHHHHHHHHh--cCCcEEEECchHh-CCCccCCCCCccccccccccC
Confidence            7799999999998763   345677899999999999999988  5689999999998 4321 1122468899887432


Q ss_pred             ccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCC------CchHHHHHHHHhcCCCCC--CCCCc
Q 039049          150 DYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQP------TSTLLLILAMVKGLRGEY--PNTTV  221 (305)
Q Consensus       150 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~------~~~~~~~~~~~~~~~~~~--~~~~~  221 (305)
                      ..   +.+.|+.+|+++|.+++.+. +.+++++++||++|||+......      .....++.....+.....  ++..+
T Consensus       222 ~~---~~~~Y~~sK~~~E~~~~~~~-~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (427)
T 4f6c_A          222 QL---LTSPYTRSKFYSELKVLEAV-NNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPV  297 (427)
T ss_dssp             CC---CCSHHHHHHHHHHHHHHHHH-HTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHTCEE
T ss_pred             CC---CCCchHHHHHHHHHHHHHHH-HcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCCccccceE
Confidence            21   11789999999999999875 47999999999999999865432      113445566665555443  45689


Q ss_pred             cceeHHHHHHHHHHhhcccccCceEEEe-cCCcCHHHHHHHHHHhCC
Q 039049          222 GFVHIDDVVGAHILAMEETRASGRLICS-SSVAHWSPIIEMLKATYP  267 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~  267 (305)
                      +|++++|+|++++.++..+..++.||++ ++.+++.|+++.+.+ ++
T Consensus       298 ~~v~v~DvA~ai~~~~~~~~~g~~~~l~~~~~~s~~el~~~i~~-~g  343 (427)
T 4f6c_A          298 DFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKR-KE  343 (427)
T ss_dssp             CCEEHHHHHHHHHHHTTSCCCCSEEEESCSCCEEHHHHHHHHHS-SC
T ss_pred             EEeeHHHHHHHHHHHHcCCCCCCEEEecCCCCCcHHHHHHHHHH-cC
Confidence            9999999999999999987777789995 678999999999998 54

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=100.00  E-value=3.2e-36  Score=273.29  Aligned_cols=255  Identities=13%  Similarity=0.123  Sum_probs=192.7

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhh----------ccCccCceEEEEccCCCcchHHHH
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWE----------LNGAEERLKIMKADLLMEGSFDEA   70 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~~~~~~D~~d~~~~~~~   70 (305)
                      ||+|||||||||||++|+++|++.|++|++++|+.........+..          ......+++++.+|+.+++.+. +
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~  228 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-L  228 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-C
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-C
Confidence            5789999999999999999999999999999999874322211111          0111348999999999988777 6


Q ss_pred             hcCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccC-CCCCCcccCCCCCCCc
Q 039049           71 IQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRH-DAQQVSPLNESHWSDP  149 (305)
Q Consensus        71 ~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~-~~~~~~~~~E~~~~~~  149 (305)
                      ..++|+|||||+...   ...++..++++|+.++.+++++|++  +.++|||+||.++ +... ......+++|+++..+
T Consensus       229 ~~~~D~Vih~Aa~~~---~~~~~~~~~~~Nv~gt~~ll~~a~~--~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~~~  302 (508)
T 4f6l_B          229 PENMDTIIHAGARTD---HFGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKG  302 (508)
T ss_dssp             SSCCSEEEECCCC-----------CCHHHHHHHHHHHHHHHHT--TTCEEEEEEESCT-TSEECTTCSCCEECTTCSCSS
T ss_pred             ccCCCEEEECCceec---CCCCHHHHhhhHHHHHHHHHHHHHh--CCCcEEEeCChhh-ccCCccCCcCccccccccccc
Confidence            779999999999875   3445677889999999999999987  4589999999998 3221 1112468889887433


Q ss_pred             ccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCC------CchHHHHHHHHhcCCCCC--CCCCc
Q 039049          150 DYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQP------TSTLLLILAMVKGLRGEY--PNTTV  221 (305)
Q Consensus       150 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~------~~~~~~~~~~~~~~~~~~--~~~~~  221 (305)
                      ..   +.+.|+.+|+.+|.+++.+. +.|++++++||++|||+......      .....++.....+.....  ++..+
T Consensus       303 ~~---~~~~Y~~sK~~~E~~~~~~~-~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~  378 (508)
T 4f6l_B          303 QL---LTSPYTRSKFYSELKVLEAV-NNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPV  378 (508)
T ss_dssp             BC---CCSHHHHHHHHHHHHHHHHH-HTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGGSEE
T ss_pred             cc---CCCcHHHHHHHHHHHHHHHH-HcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccCceE
Confidence            21   12789999999999999875 47999999999999999865431      113345555555544433  34589


Q ss_pred             cceeHHHHHHHHHHhhcccccCceEEEe-cCCcCHHHHHHHHHHhC
Q 039049          222 GFVHIDDVVGAHILAMEETRASGRLICS-SSVAHWSPIIEMLKATY  266 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~  266 (305)
                      +|+|++|+|++++.++.++..++.||++ ++.+++.|+++.+.+..
T Consensus       379 ~~v~v~DvA~ai~~~~~~~~~~~~~nl~~~~~~s~~el~~~i~~~~  424 (508)
T 4f6l_B          379 DFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKRKE  424 (508)
T ss_dssp             ECEEHHHHHHHHHHHTTBCCSCSEEEESCSCEEEHHHHHHHHHSSC
T ss_pred             EEEcHHHHHHHHHHHHhCCCCCCEEEeCCCCCCCHHHHHHHHHHcC
Confidence            9999999999999999987777789996 57899999999999764

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=100.00  E-value=3.9e-36  Score=243.57  Aligned_cols=209  Identities=17%  Similarity=0.192  Sum_probs=172.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCC-cchHHHHhcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLM-EGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~d~Vi~~   80 (305)
                      |+|+||||+||||+++++.|+++|++|++++|++.+....          .+++++++|+.| .+++.++++++|+|||+
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~----------~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~   70 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY----------NNVKAVHFDVDWTPEEMAKQLHGMDAIINV   70 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC----------TTEEEEECCTTSCHHHHHTTTTTCSEEEEC
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc----------CCceEEEecccCCHHHHHHHHcCCCEEEEC
Confidence            4899999999999999999999999999999987643321          378999999999 99999999999999999


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHH
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYA  160 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  160 (305)
                      |+....        ..+++|+.++.+++++|++. ++++||++||.+++..       .+..| +++.|.      +.|+
T Consensus        71 ag~~~~--------~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~~~-------~~~~e-~~~~~~------~~Y~  127 (219)
T 3dqp_A           71 SGSGGK--------SLLKVDLYGAVKLMQAAEKA-EVKRFILLSTIFSLQP-------EKWIG-AGFDAL------KDYY  127 (219)
T ss_dssp             CCCTTS--------SCCCCCCHHHHHHHHHHHHT-TCCEEEEECCTTTTCG-------GGCCS-HHHHHT------HHHH
T ss_pred             CcCCCC--------CcEeEeHHHHHHHHHHHHHh-CCCEEEEECcccccCC-------Ccccc-cccccc------cHHH
Confidence            998652        27899999999999999998 8999999999876543       34444 222222      7899


Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhccc
Q 039049          161 YAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       161 ~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  240 (305)
                      .+|.++|.+++   +..+++++++||+.+||+......                .+++..+++++++|+|++++.+++++
T Consensus       128 ~sK~~~e~~~~---~~~~i~~~ilrp~~v~g~~~~~~~----------------~~~~~~~~~i~~~Dva~~i~~~l~~~  188 (219)
T 3dqp_A          128 IAKHFADLYLT---KETNLDYTIIQPGALTEEEATGLI----------------DINDEVSASNTIGDVADTIKELVMTD  188 (219)
T ss_dssp             HHHHHHHHHHH---HSCCCEEEEEEECSEECSCCCSEE----------------EESSSCCCCEEHHHHHHHHHHHHTCG
T ss_pred             HHHHHHHHHHH---hccCCcEEEEeCceEecCCCCCcc----------------ccCCCcCCcccHHHHHHHHHHHHhCc
Confidence            99999999986   567999999999999998643211                12345789999999999999999987


Q ss_pred             cc-CceEEEecCCcCHHHHHHHH
Q 039049          241 RA-SGRLICSSSVAHWSPIIEML  262 (305)
Q Consensus       241 ~~-~~~~~~~~~~~s~~el~~~i  262 (305)
                      .. +..||++++..+++|+++.-
T Consensus       189 ~~~g~~~~i~~g~~~~~e~~~~~  211 (219)
T 3dqp_A          189 HSIGKVISMHNGKTAIKEALESL  211 (219)
T ss_dssp             GGTTEEEEEEECSEEHHHHHHTT
T ss_pred             cccCcEEEeCCCCccHHHHHHHH
Confidence            65 55799976679999988754

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=100.00  E-value=7.8e-36  Score=249.09  Aligned_cols=219  Identities=16%  Similarity=0.200  Sum_probs=178.1

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ||+||||||+||||++|++.|++.|++|++++|++....           ..+++++.+|+.|++.+.++++++|+|||+
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~   70 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA-----------EAHEEIVACDLADAQAVHDLVKDCDGIIHL   70 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC-----------CTTEEECCCCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc-----------CCCccEEEccCCCHHHHHHHHcCCCEEEEC
Confidence            468999999999999999999999999999999875321           125788999999999999999999999999


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHH
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYA  160 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  160 (305)
                      |+...    .+.+...+++|+.++.++++++.+. ++++|||+||..+|+..+.   ..+++|+++..|.      +.|+
T Consensus        71 a~~~~----~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~~~~~~---~~~~~E~~~~~~~------~~Y~  136 (267)
T 3ay3_A           71 GGVSV----ERPWNDILQANIIGAYNLYEAARNL-GKPRIVFASSNHTIGYYPR---TTRIDTEVPRRPD------SLYG  136 (267)
T ss_dssp             CSCCS----CCCHHHHHHHTHHHHHHHHHHHHHT-TCCEEEEEEEGGGSTTSBT---TSCBCTTSCCCCC------SHHH
T ss_pred             CcCCC----CCCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeCCHHHhCCCCC---CCCCCCCCCCCCC------ChHH
Confidence            99863    3345668899999999999999988 8899999999998876433   2678999887776      7899


Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhccc
Q 039049          161 YAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       161 ~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  240 (305)
                      .+|..+|.+++.+..+++++++++||+.+|+...     .                +...++|+|++|+|+++..+++++
T Consensus       137 ~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~~~~~-----~----------------~~~~~~~~~~~dva~~~~~~~~~~  195 (267)
T 3ay3_A          137 LSKCFGEDLASLYYHKFDIETLNIRIGSCFPKPK-----D----------------ARMMATWLSVDDFMRLMKRAFVAP  195 (267)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCEEEEEECBCSSSCC-----S----------------HHHHHHBCCHHHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHHHHHHHcCCCEEEEeceeecCCCC-----C----------------CCeeeccccHHHHHHHHHHHHhCC
Confidence            9999999999988878899999999999994310     0                011578999999999999999887


Q ss_pred             cc-CceEEEe-cCCcCHHHHHHHHHHhCC
Q 039049          241 RA-SGRLICS-SSVAHWSPIIEMLKATYP  267 (305)
Q Consensus       241 ~~-~~~~~~~-~~~~s~~el~~~i~~~~~  267 (305)
                      .. .+.|++. +...++.++.+.  +.+|
T Consensus       196 ~~~~~~~~~~~~~~~~~~d~~~~--~~lg  222 (267)
T 3ay3_A          196 KLGCTVVYGASANTESWWDNDKS--AFLG  222 (267)
T ss_dssp             CCCEEEEEECCSCSSCCBCCGGG--GGGC
T ss_pred             CCCceeEecCCCccccccCHHHH--HHcC
Confidence            65 3467764 445555555554  4444

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=100.00  E-value=1.6e-35  Score=258.42  Aligned_cols=210  Identities=17%  Similarity=0.156  Sum_probs=178.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      |+|||||||||||++|+++|+++|+ +|++++|+                           .|.+.+.++++++|+|||+
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~---------------------------~d~~~l~~~~~~~d~Vih~   53 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ---------------------------TKEEELESALLKADFIVHL   53 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT---------------------------CCHHHHHHHHHHCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC---------------------------CCHHHHHHHhccCCEEEEC
Confidence            5799999999999999999999998 77776443                           5677888889899999999


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCcc-EEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhH
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVK-RVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWY  159 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y  159 (305)
                      |+....    +.+...+++|+.++.+++++|++. +++ +|||+||.++++.                         +.|
T Consensus        54 a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~Ss~~~~~~-------------------------~~Y  103 (369)
T 3st7_A           54 AGVNRP----EHDKEFSLGNVSYLDHVLDILTRN-TKKPAILLSSSIQATQD-------------------------NPY  103 (369)
T ss_dssp             CCSBCT----TCSTTCSSSCCBHHHHHHHHHTTC-SSCCEEEEEEEGGGGSC-------------------------SHH
T ss_pred             CcCCCC----CCHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEeCchhhcCC-------------------------CCc
Confidence            998763    345568899999999999999998 777 9999999987651                         779


Q ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC-chHHHHHHHHhcCCCCCC--CCCccceeHHHHHHHHHHh
Q 039049          160 AYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPT-STLLLILAMVKGLRGEYP--NTTVGFVHIDDVVGAHILA  236 (305)
Q Consensus       160 ~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D~a~~~~~~  236 (305)
                      +.+|.++|++++.++++++++++++||+++||++..+... ....++..+..+.+...+  +..++|+|++|+|++++.+
T Consensus       104 ~~sK~~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  183 (369)
T 3st7_A          104 GESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRA  183 (369)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHH
Confidence            9999999999999998899999999999999998765433 345566677777766654  4489999999999999999


Q ss_pred             hccccc--CceEEEe-cCCcCHHHHHHHHHHhCCC
Q 039049          237 MEETRA--SGRLICS-SSVAHWSPIIEMLKATYPS  268 (305)
Q Consensus       237 ~~~~~~--~~~~~~~-~~~~s~~el~~~i~~~~~~  268 (305)
                      ++++..  ++.||++ ++.+|+.|+++.+.+.+|.
T Consensus       184 l~~~~~~~~~~~~i~~~~~~s~~e~~~~~~~~~g~  218 (369)
T 3st7_A          184 IEGTPTIENGVPTVPNVFKVTLGEIVDLLYKFKQS  218 (369)
T ss_dssp             HHTCCCEETTEECCSCCEEEEHHHHHHHHHHHHHH
T ss_pred             HhCCcccCCceEEeCCCCceeHHHHHHHHHHHhCC
Confidence            998877  6789996 5799999999999998864

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=100.00  E-value=2.1e-34  Score=240.35  Aligned_cols=214  Identities=18%  Similarity=0.202  Sum_probs=181.0

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ||+||||||+|+||+++++.|+++|++|++++|++.+..           ..+++++.+|+.|.+++.++++++|+||||
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   71 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA-----------GPNEECVQCDLADANAVNAMVAGCDGIVHL   71 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC-----------CTTEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc-----------CCCCEEEEcCCCCHHHHHHHHcCCCEEEEC
Confidence            468999999999999999999999999999999876432           237899999999999999999999999999


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHH
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYA  160 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  160 (305)
                      ||...    .+++...+++|+.++.++++++++. ++++|||+||..+++....   ..+++|+.+..+.      +.|+
T Consensus        72 Ag~~~----~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iv~~SS~~~~g~~~~---~~~~~e~~~~~~~------~~Y~  137 (267)
T 3rft_A           72 GGISV----EKPFEQILQGNIIGLYNLYEAARAH-GQPRIVFASSNHTIGYYPQ---TERLGPDVPARPD------GLYG  137 (267)
T ss_dssp             CSCCS----CCCHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGGGTTSBT---TSCBCTTSCCCCC------SHHH
T ss_pred             CCCcC----cCCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcchHHhCCCCC---CCCCCCCCCCCCC------ChHH
Confidence            99853    4566778999999999999999998 8899999999998865443   3678888887776      8899


Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhccc
Q 039049          161 YAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       161 ~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  240 (305)
                      .||..+|.+++.++.+++++++++||+.+||+...                     +...++|++++|+++++..+++.+
T Consensus       138 ~sK~~~e~~~~~~a~~~g~~~~~vr~~~v~~~~~~---------------------~~~~~~~~~~~d~a~~~~~~~~~~  196 (267)
T 3rft_A          138 VSKCFGENLARMYFDKFGQETALVRIGSCTPEPNN---------------------YRMLSTWFSHDDFVSLIEAVFRAP  196 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEECBCSSSCCS---------------------TTHHHHBCCHHHHHHHHHHHHHCS
T ss_pred             HHHHHHHHHHHHHHHHhCCeEEEEEeecccCCCCC---------------------CCceeeEEcHHHHHHHHHHHHhCC
Confidence            99999999999999899999999999999987321                     112567999999999999999987


Q ss_pred             ccCc-eEEE-ecCCcCHHHHHH
Q 039049          241 RASG-RLIC-SSSVAHWSPIIE  260 (305)
Q Consensus       241 ~~~~-~~~~-~~~~~s~~el~~  260 (305)
                      ..+. .+++ +++..++.++..
T Consensus       197 ~~~~~~~~~~s~~~~~~~~~~~  218 (267)
T 3rft_A          197 VLGCPVVWGASANDAGWWDNSH  218 (267)
T ss_dssp             CCCSCEEEECCCCTTCCBCCGG
T ss_pred             CCCceEEEEeCCCCCCcccChh
Confidence            7654 5555 566666666543

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=100.00  E-value=4.6e-34  Score=234.05  Aligned_cols=213  Identities=19%  Similarity=0.196  Sum_probs=169.2

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCce-EEEEccCCCcchHHHHhcCCCEEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERL-KIMKADLLMEGSFDEAIQGVDGVFH   79 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~d~~~~~~~~~~~d~Vi~   79 (305)
                      +|+|+||||+|+||++++++|+++|++|++++|++++.....        ..++ +++++|+.  +.+.+++.++|+|||
T Consensus        21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~--------~~~~~~~~~~Dl~--~~~~~~~~~~D~vi~   90 (236)
T 3e8x_A           21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELR--------ERGASDIVVANLE--EDFSHAFASIDAVVF   90 (236)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH--------HTTCSEEEECCTT--SCCGGGGTTCSEEEE
T ss_pred             CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHH--------hCCCceEEEcccH--HHHHHHHcCCCEEEE
Confidence            378999999999999999999999999999999876443221        1267 89999998  778888999999999


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhH
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWY  159 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y  159 (305)
                      +|+....    +.+...+++|+.++.+++++|++. ++++||++||...+.+           |..+ .+.      +.|
T Consensus        91 ~ag~~~~----~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~~~-----------~~~~-~~~------~~Y  147 (236)
T 3e8x_A           91 AAGSGPH----TGADKTILIDLWGAIKTIQEAEKR-GIKRFIMVSSVGTVDP-----------DQGP-MNM------RHY  147 (236)
T ss_dssp             CCCCCTT----SCHHHHHHTTTHHHHHHHHHHHHH-TCCEEEEECCTTCSCG-----------GGSC-GGG------HHH
T ss_pred             CCCCCCC----CCccccchhhHHHHHHHHHHHHHc-CCCEEEEEecCCCCCC-----------CCCh-hhh------hhH
Confidence            9998652    456778999999999999999998 8999999999543221           1111 122      779


Q ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhcc
Q 039049          160 AYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEE  239 (305)
Q Consensus       160 ~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  239 (305)
                      +.+|.++|.+++    ..+++++++||+.++|+........             ...+.+.+++++++|+|++++.++++
T Consensus       148 ~~sK~~~e~~~~----~~gi~~~~lrpg~v~~~~~~~~~~~-------------~~~~~~~~~~i~~~Dva~~~~~~~~~  210 (236)
T 3e8x_A          148 LVAKRLADDELK----RSSLDYTIVRPGPLSNEESTGKVTV-------------SPHFSEITRSITRHDVAKVIAELVDQ  210 (236)
T ss_dssp             HHHHHHHHHHHH----HSSSEEEEEEECSEECSCCCSEEEE-------------ESSCSCCCCCEEHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHH----HCCCCEEEEeCCcccCCCCCCeEEe-------------ccCCCcccCcEeHHHHHHHHHHHhcC
Confidence            999999999875    6799999999999999864321100             01222368999999999999999998


Q ss_pred             ccc-CceEEEecCCcCHHHHHHHHH
Q 039049          240 TRA-SGRLICSSSVAHWSPIIEMLK  263 (305)
Q Consensus       240 ~~~-~~~~~~~~~~~s~~el~~~i~  263 (305)
                      +.. +..|+++++..++.|+++.+.
T Consensus       211 ~~~~g~~~~v~~~~~~~~e~~~~i~  235 (236)
T 3e8x_A          211 QHTIGKTFEVLNGDTPIAKVVEQLG  235 (236)
T ss_dssp             GGGTTEEEEEEECSEEHHHHHHTC-
T ss_pred             ccccCCeEEEeCCCcCHHHHHHHhc
Confidence            754 557999766799999998765

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=100.00  E-value=3.6e-34  Score=241.31  Aligned_cols=245  Identities=17%  Similarity=0.151  Sum_probs=180.1

Q ss_pred             cEEEeCCcchHHHHHHHHHHHc--CCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            3 EYCVTGGTGFIAAHLVKALLDK--GHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      +||||||+||||+++++.|+++  |++|++++|++.+.....        ..+++++.+|+.|++++.++++++|+|||+
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~   72 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA--------AQGITVRQADYGDEAALTSALQGVEKLLLI   72 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH--------HTTCEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh--------cCCCeEEEcCCCCHHHHHHHHhCCCEEEEe
Confidence            5999999999999999999998  999999999876432211        126789999999999999999999999999


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHH
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYA  160 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  160 (305)
                      |+...            ..|+.++.+++++|++. ++++|||+||.+++.                 .+       ..|+
T Consensus        73 a~~~~------------~~~~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~~-----------------~~-------~~y~  115 (286)
T 2zcu_A           73 SSSEV------------GQRAPQHRNVINAAKAA-GVKFIAYTSLLHADT-----------------SP-------LGLA  115 (286)
T ss_dssp             C--------------------CHHHHHHHHHHHH-TCCEEEEEEETTTTT-----------------CC-------STTH
T ss_pred             CCCCc------------hHHHHHHHHHHHHHHHc-CCCEEEEECCCCCCC-----------------Cc-------chhH
Confidence            98621            14788999999999998 899999999987641                 00       4599


Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCC--CCCCccceeHHHHHHHHHHhhc
Q 039049          161 YAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEY--PNTTVGFVHIDDVVGAHILAME  238 (305)
Q Consensus       161 ~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~D~a~~~~~~~~  238 (305)
                      .+|..+|.+++.    .+++++++||+.++++..    .    ++.....+.....  ++..++|+|++|+|++++.+++
T Consensus       116 ~sK~~~e~~~~~----~~~~~~ilrp~~~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~  183 (286)
T 2zcu_A          116 DEHIETEKMLAD----SGIVYTLLRNGWYSENYL----A----SAPAALEHGVFIGAAGDGKIASATRADYAAAAARVIS  183 (286)
T ss_dssp             HHHHHHHHHHHH----HCSEEEEEEECCBHHHHH----T----THHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH----cCCCeEEEeChHHhhhhH----H----HhHHhhcCCceeccCCCCccccccHHHHHHHHHHHhc
Confidence            999999998853    689999999987766531    1    1222222222223  3458999999999999999998


Q ss_pred             ccc-cCceEEEec-CCcCHHHHHHHHHHhCCCC----CCCCCCCC----CCCC----------------CCCcccchhHH
Q 039049          239 ETR-ASGRLICSS-SVAHWSPIIEMLKATYPSY----PYESKCSK----QEGD----------------NSPHSMDTSKL  292 (305)
Q Consensus       239 ~~~-~~~~~~~~~-~~~s~~el~~~i~~~~~~~----~~~~~~~~----~~~~----------------~~~~~~~~~~~  292 (305)
                      ++. .++.||+++ +.+|+.|+++.+.+.+|..    ++|.....    ....                ......|++++
T Consensus       184 ~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (286)
T 2zcu_A          184 EAGHEGKVYELAGDSAWTLTQLAAELTKQSGKQVTYQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDDSKTL  263 (286)
T ss_dssp             SSSCTTCEEEECCSSCBCHHHHHHHHHHHHSSCCEEEECCHHHHHHHHTTSSCCHHHHHHHHHHHHHHHTTTTCCCCCHH
T ss_pred             CCCCCCceEEEeCCCcCCHHHHHHHHHHHHCCCCceeeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCccCchHH
Confidence            764 456899965 5899999999999998752    11111000    0011                11255688999


Q ss_pred             HH-hCCCccccCCC
Q 039049          293 FE-LGFVGFKSVPQ  305 (305)
Q Consensus       293 ~~-lg~~~~~~l~e  305 (305)
                      ++ ||| ++++|+|
T Consensus       264 ~~~lg~-~~~~~~e  276 (286)
T 2zcu_A          264 SKLIGH-PTTTLAE  276 (286)
T ss_dssp             HHHHTS-CCCCHHH
T ss_pred             HHHhCc-CCCCHHH
Confidence            99 999 8877753

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=100.00  E-value=2.7e-33  Score=227.63  Aligned_cols=213  Identities=15%  Similarity=0.114  Sum_probs=163.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      |+|||||||||||++|++.|+++|++|++++|++.+....        ...+++++++|+.|.+.  +.+.++|+|||+|
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~~~~~~~D~~d~~~--~~~~~~d~vi~~a   70 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR--------LGATVATLVKEPLVLTE--ADLDSVDAVVDAL   70 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------TCTTSEEEECCGGGCCH--HHHTTCSEEEECC
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccc--------cCCCceEEecccccccH--hhcccCCEEEECC
Confidence            5699999999999999999999999999999986543221        12378999999999887  7888999999999


Q ss_pred             cccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHHH
Q 039049           82 SPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAY  161 (305)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~  161 (305)
                      +.....       .....|+.++.+++++|++. + ++||++||.++++...... ..+..|...+.|.      +.|+.
T Consensus        71 g~~~~~-------~~~~~n~~~~~~l~~a~~~~-~-~~~v~~SS~~~~~~~~~~~-~~~~~~~~~~~~~------~~y~~  134 (224)
T 3h2s_A           71 SVPWGS-------GRGYLHLDFATHLVSLLRNS-D-TLAVFILGSASLAMPGADH-PMILDFPESAASQ------PWYDG  134 (224)
T ss_dssp             CCCTTS-------SCTHHHHHHHHHHHHTCTTC-C-CEEEEECCGGGSBCTTCSS-CGGGGCCGGGGGS------TTHHH
T ss_pred             ccCCCc-------chhhHHHHHHHHHHHHHHHc-C-CcEEEEecceeeccCCCCc-cccccCCCCCccc------hhhHH
Confidence            986211       13578999999999999998 7 9999999987766543321 1244555444444      77999


Q ss_pred             HHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhcccc
Q 039049          162 AKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETR  241 (305)
Q Consensus       162 sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  241 (305)
                      +|..+|. +..+.++.+++++++||+.+||++....  ..       ........++..+++++++|+|++++.+++++.
T Consensus       135 sK~~~e~-~~~~~~~~~i~~~ivrp~~v~g~~~~~~--~~-------~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~  204 (224)
T 3h2s_A          135 ALYQYYE-YQFLQMNANVNWIGISPSEAFPSGPATS--YV-------AGKDTLLVGEDGQSHITTGNMALAILDQLEHPT  204 (224)
T ss_dssp             HHHHHHH-HHHHTTCTTSCEEEEEECSBCCCCCCCC--EE-------EESSBCCCCTTSCCBCCHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHH-HHHHHhcCCCcEEEEcCccccCCCcccC--ce-------ecccccccCCCCCceEeHHHHHHHHHHHhcCcc
Confidence            9999994 4445456799999999999999954321  10       112223344557899999999999999999887


Q ss_pred             c-CceEEEec
Q 039049          242 A-SGRLICSS  250 (305)
Q Consensus       242 ~-~~~~~~~~  250 (305)
                      . +..|++++
T Consensus       205 ~~g~~~~~~~  214 (224)
T 3h2s_A          205 AIRDRIVVRD  214 (224)
T ss_dssp             CTTSEEEEEE
T ss_pred             ccCCEEEEec
Confidence            6 55799865

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=100.00  E-value=2.5e-33  Score=236.62  Aligned_cols=213  Identities=16%  Similarity=0.232  Sum_probs=163.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHc-CCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDK-GHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      |+|||||||||||+++++.|++. |++|++++|++++.....        ..+++++++|+.|++.+.++++++|+|||+
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~--------~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~   72 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW--------RGKVSVRQLDYFNQESMVEAFKGMDTVVFI   72 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG--------BTTBEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh--------hCCCEEEEcCCCCHHHHHHHHhCCCEEEEe
Confidence            57999999999999999999998 999999999876433211        237899999999999999999999999999


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHH
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYA  160 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  160 (305)
                      |+....          ...|+.++.+++++|++. ++++|||+||.+.   ...    .+.                .+.
T Consensus        73 a~~~~~----------~~~~~~~~~~l~~aa~~~-gv~~iv~~Ss~~~---~~~----~~~----------------~~~  118 (289)
T 3e48_A           73 PSIIHP----------SFKRIPEVENLVYAAKQS-GVAHIIFIGYYAD---QHN----NPF----------------HMS  118 (289)
T ss_dssp             CCCCCS----------HHHHHHHHHHHHHHHHHT-TCCEEEEEEESCC---STT----CCS----------------TTH
T ss_pred             CCCCcc----------chhhHHHHHHHHHHHHHc-CCCEEEEEcccCC---CCC----CCC----------------ccc
Confidence            987542          234789999999999998 8999999999432   100    010                011


Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCC--CCCCCccceeHHHHHHHHHHhhc
Q 039049          161 YAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGE--YPNTTVGFVHIDDVVGAHILAME  238 (305)
Q Consensus       161 ~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~v~D~a~~~~~~~~  238 (305)
                      ..+..+|..+    +..+++++++||+.+||+..        .++.....+....  .++..++|++++|+|++++.+++
T Consensus       119 ~~~~~~e~~~----~~~g~~~~ilrp~~~~~~~~--------~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~  186 (289)
T 3e48_A          119 PYFGYASRLL----STSGIDYTYVRMAMYMDPLK--------PYLPELMNMHKLIYPAGDGRINYITRNDIARGVIAIIK  186 (289)
T ss_dssp             HHHHHHHHHH----HHHCCEEEEEEECEESTTHH--------HHHHHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHH----HHcCCCEEEEeccccccccH--------HHHHHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHc
Confidence            1122344443    45699999999999999731        1233333333323  34558999999999999999999


Q ss_pred             cccc-CceEEEecCCcCHHHHHHHHHHhCCC
Q 039049          239 ETRA-SGRLICSSSVAHWSPIIEMLKATYPS  268 (305)
Q Consensus       239 ~~~~-~~~~~~~~~~~s~~el~~~i~~~~~~  268 (305)
                      ++.. ++.||++++.+|+.|+++.+.+.+|.
T Consensus       187 ~~~~~g~~~~~~~~~~s~~e~~~~~~~~~g~  217 (289)
T 3e48_A          187 NPDTWGKRYLLSGYSYDMKELAAILSEASGT  217 (289)
T ss_dssp             CGGGTTCEEEECCEEEEHHHHHHHHHHHHTS
T ss_pred             CCCcCCceEEeCCCcCCHHHHHHHHHHHHCC
Confidence            8776 66899887789999999999999975

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=100.00  E-value=4.7e-33  Score=234.65  Aligned_cols=213  Identities=16%  Similarity=0.175  Sum_probs=170.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHc--CCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDK--GHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~   79 (305)
                      |+|||||||||||+++++.|+++  |++|++++|++.+....   .     ..+++++.+|+.|++.+.++++++|+|||
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l---~-----~~~~~~~~~D~~d~~~l~~~~~~~d~vi~   72 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTL---A-----DQGVEVRHGDYNQPESLQKAFAGVSKLLF   72 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHH---H-----HTTCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHH---h-----hcCCeEEEeccCCHHHHHHHHhcCCEEEE
Confidence            57999999999999999999998  99999999987543221   1     12678999999999999999999999999


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhH
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWY  159 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y  159 (305)
                      +|+...     ..     ++|+.++.+++++|++. ++++|||+||.+++..                 +       ..|
T Consensus        73 ~a~~~~-----~~-----~~n~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~~~-----------------~-------~~y  117 (287)
T 2jl1_A           73 ISGPHY-----DN-----TLLIVQHANVVKAARDA-GVKHIAYTGYAFAEES-----------------I-------IPL  117 (287)
T ss_dssp             CCCCCS-----CH-----HHHHHHHHHHHHHHHHT-TCSEEEEEEETTGGGC-----------------C-------STH
T ss_pred             cCCCCc-----Cc-----hHHHHHHHHHHHHHHHc-CCCEEEEECCCCCCCC-----------------C-------Cch
Confidence            998631     11     57999999999999998 8999999999876310                 0       459


Q ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHH-hcCC-CCCCCCCccceeHHHHHHHHHHhh
Q 039049          160 AYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMV-KGLR-GEYPNTTVGFVHIDDVVGAHILAM  237 (305)
Q Consensus       160 ~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~i~v~D~a~~~~~~~  237 (305)
                      +.+|..+|.+++    .++++++++||+.++|+...   ..    +.... .+.. ...+++.++|+|++|+|++++.++
T Consensus       118 ~~~K~~~E~~~~----~~~~~~~ilrp~~~~~~~~~---~~----~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~  186 (287)
T 2jl1_A          118 AHVHLATEYAIR----TTNIPYTFLRNALYTDFFVN---EG----LRASTESGAIVTNAGSGIVNSVTRNELALAAATVL  186 (287)
T ss_dssp             HHHHHHHHHHHH----HTTCCEEEEEECCBHHHHSS---GG----GHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH----HcCCCeEEEECCEeccccch---hh----HHHHhhCCceeccCCCCccCccCHHHHHHHHHHHh
Confidence            999999999885    46899999999998886421   11    12222 2322 223456899999999999999999


Q ss_pred             ccccc-CceEEEe-cCCcCHHHHHHHHHHhCCC
Q 039049          238 EETRA-SGRLICS-SSVAHWSPIIEMLKATYPS  268 (305)
Q Consensus       238 ~~~~~-~~~~~~~-~~~~s~~el~~~i~~~~~~  268 (305)
                      +++.. ++.||++ ++.+|+.|+++.+.+.+|.
T Consensus       187 ~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~  219 (287)
T 2jl1_A          187 TEEGHENKTYNLVSNQPWTFDELAQILSEVSGK  219 (287)
T ss_dssp             TSSSCTTEEEEECCSSCBCHHHHHHHHHHHHSS
T ss_pred             cCCCCCCcEEEecCCCcCCHHHHHHHHHHHHCC
Confidence            88643 5579996 4589999999999999875

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=100.00  E-value=1.9e-32  Score=222.04  Aligned_cols=216  Identities=13%  Similarity=0.194  Sum_probs=146.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      |+|||||||||||++|++.|+++|++|++++|++++....      .   ++++++++|+.|.+.  +.+.++|+|||+|
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~---~~~~~~~~D~~d~~~--~~~~~~d~vi~~a   69 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQT------H---KDINILQKDIFDLTL--SDLSDQNVVVDAY   69 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHH------C---SSSEEEECCGGGCCH--HHHTTCSEEEECC
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhc------c---CCCeEEeccccChhh--hhhcCCCEEEECC
Confidence            5799999999999999999999999999999987543221      1   378999999999887  7888999999999


Q ss_pred             cccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHHH
Q 039049           82 SPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAY  161 (305)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~  161 (305)
                      +....         ....|+.++.++++++++. ++++||++||..++++....   .+..|+.+..|.      +.|+.
T Consensus        70 g~~~~---------~~~~~~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~~---~~~~~~~~~~~~------~~y~~  130 (221)
T 3ew7_A           70 GISPD---------EAEKHVTSLDHLISVLNGT-VSPRLLVVGGAASLQIDEDG---NTLLESKGLREA------PYYPT  130 (221)
T ss_dssp             CSSTT---------TTTSHHHHHHHHHHHHCSC-CSSEEEEECCCC----------------------C------CCSCC
T ss_pred             cCCcc---------ccchHHHHHHHHHHHHHhc-CCceEEEEecceEEEcCCCC---ccccccCCCCCH------HHHHH
Confidence            98431         3567999999999999998 88999999999877765331   355666665555      67999


Q ss_pred             HHHHHHHHHHHHHH-HcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhccc
Q 039049          162 AKTIAEKEAWRIAK-DCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       162 sK~~~E~~~~~~~~-~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  240 (305)
                      +|..+|.+. .+.+ ..+++++++||+.+||++.....     +   ...+..........++++++|+|++++.+++++
T Consensus       131 ~k~~~e~~~-~~~~~~~gi~~~ivrp~~v~g~~~~~~~-----~---~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~  201 (221)
T 3ew7_A          131 ARAQAKQLE-HLKSHQAEFSWTYISPSAMFEPGERTGD-----Y---QIGKDHLLFGSDGNSFISMEDYAIAVLDEIERP  201 (221)
T ss_dssp             HHHHHHHHH-HHHTTTTTSCEEEEECSSCCCCC-----------------------------CCCHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHH-HHHhhccCccEEEEeCcceecCCCccCc-----e---EeccccceecCCCCceEeHHHHHHHHHHHHhCc
Confidence            999999863 3333 67999999999999998432110     0   011222222222357999999999999999998


Q ss_pred             cc-CceEEEec-CCcCHH
Q 039049          241 RA-SGRLICSS-SVAHWS  256 (305)
Q Consensus       241 ~~-~~~~~~~~-~~~s~~  256 (305)
                      .. +..||+++ ...+..
T Consensus       202 ~~~g~~~~~~~~~~~~~~  219 (221)
T 3ew7_A          202 NHLNEHFTVAGKLEHHHH  219 (221)
T ss_dssp             SCTTSEEECCC-------
T ss_pred             cccCCEEEECCCCccccc
Confidence            76 55799865 444443

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=100.00  E-value=3.2e-32  Score=225.15  Aligned_cols=229  Identities=19%  Similarity=0.113  Sum_probs=171.3

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHc--CCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDK--GHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      ||+|+||||+|+||++++++|+++  |++|++++|++.+...   +      ..+++++.+|+.|.+++.++++++|+||
T Consensus         4 ~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~---~------~~~~~~~~~D~~d~~~~~~~~~~~d~vi   74 (253)
T 1xq6_A            4 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK---I------GGEADVFIGDITDADSINPAFQGIDALV   74 (253)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHH---T------TCCTTEEECCTTSHHHHHHHHTTCSEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhh---c------CCCeeEEEecCCCHHHHHHHHcCCCEEE
Confidence            578999999999999999999999  8999999997643221   1      2367899999999999999999999999


Q ss_pred             EeccccccCC-------------CCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           79 HTASPVLVPY-------------DNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        79 ~~a~~~~~~~-------------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      |+|+......             ..+.....+++|+.++.++++++++. ++++||++||.+++..            ..
T Consensus        75 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~~~~------------~~  141 (253)
T 1xq6_A           75 ILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-GVKHIVVVGSMGGTNP------------DH  141 (253)
T ss_dssp             ECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-TCSEEEEEEETTTTCT------------TC
T ss_pred             EeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc-CCCEEEEEcCccCCCC------------CC
Confidence            9999764210             01122245789999999999999998 8899999999875321            11


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcccee
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVH  225 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  225 (305)
                      +..+. .   ...|+.+|..+|.+++    ..+++++++||+.+||+...... ..        .+..........++++
T Consensus       142 ~~~~~-~---~~~y~~sK~~~e~~~~----~~~i~~~~vrpg~v~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~  204 (253)
T 1xq6_A          142 PLNKL-G---NGNILVWKRKAEQYLA----DSGTPYTIIRAGGLLDKEGGVRE-LL--------VGKDDELLQTDTKTVP  204 (253)
T ss_dssp             GGGGG-G---GCCHHHHHHHHHHHHH----TSSSCEEEEEECEEECSCSSSSC-EE--------EESTTGGGGSSCCEEE
T ss_pred             ccccc-c---chhHHHHHHHHHHHHH----hCCCceEEEecceeecCCcchhh-hh--------ccCCcCCcCCCCcEEc
Confidence            11110 0   0348889999999875    37899999999999998743211 00        0111111112457999


Q ss_pred             HHHHHHHHHHhhccccc-CceEEEec----CCcCHHHHHHHHHHhCCC
Q 039049          226 IDDVVGAHILAMEETRA-SGRLICSS----SVAHWSPIIEMLKATYPS  268 (305)
Q Consensus       226 v~D~a~~~~~~~~~~~~-~~~~~~~~----~~~s~~el~~~i~~~~~~  268 (305)
                      ++|+|++++.+++++.. ++.||+++    +.+|+.|+++.+.+.+|+
T Consensus       205 ~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~  252 (253)
T 1xq6_A          205 RADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR  252 (253)
T ss_dssp             HHHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred             HHHHHHHHHHHHcCccccCCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence            99999999999998654 55799864    259999999999998864

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.98  E-value=6.9e-32  Score=233.48  Aligned_cols=223  Identities=15%  Similarity=0.127  Sum_probs=171.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcc-cchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDL-SKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi   78 (305)
                      |+|||||||||||++|++.|++.|++|++++|++... .+...+..+.  ..+++++++|+.|.+++.++++  ++|+||
T Consensus        11 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi   88 (346)
T 3i6i_A           11 GRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALE--DKGAIIVYGLINEQEAMEKILKEHEIDIVV   88 (346)
T ss_dssp             CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHH--HTTCEEEECCTTCHHHHHHHHHHTTCCEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHH--hCCcEEEEeecCCHHHHHHHHhhCCCCEEE
Confidence            6899999999999999999999999999999987322 1222121111  2378999999999999999999  999999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCC-ccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccch
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKS-VKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNL  157 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  157 (305)
                      |+|+..               |+.++.+++++|++. + +++||+ |+   |+        .+.+|.++..|.      +
T Consensus        89 ~~a~~~---------------n~~~~~~l~~aa~~~-g~v~~~v~-S~---~g--------~~~~e~~~~~p~------~  134 (346)
T 3i6i_A           89 STVGGE---------------SILDQIALVKAMKAV-GTIKRFLP-SE---FG--------HDVNRADPVEPG------L  134 (346)
T ss_dssp             ECCCGG---------------GGGGHHHHHHHHHHH-CCCSEEEC-SC---CS--------SCTTTCCCCTTH------H
T ss_pred             ECCchh---------------hHHHHHHHHHHHHHc-CCceEEee-cc---cC--------CCCCccCcCCCc------c
Confidence            999872               788899999999999 7 999986 42   32        234555655555      7


Q ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCC-CC--CCCCccceeHHHHHHHHH
Q 039049          158 WYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRG-EY--PNTTVGFVHIDDVVGAHI  234 (305)
Q Consensus       158 ~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~i~v~D~a~~~~  234 (305)
                      .|+.+|+.+|++++.    .+++++++||+.++|.........    ......+... ..  ++..++|+|++|+|++++
T Consensus       135 ~y~~sK~~~e~~l~~----~g~~~tivrpg~~~g~~~~~~~~~----~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~  206 (346)
T 3i6i_A          135 NMYREKRRVRQLVEE----SGIPFTYICCNSIASWPYYNNIHP----SEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTM  206 (346)
T ss_dssp             HHHHHHHHHHHHHHH----TTCCBEEEECCEESSCCCSCC---------CCCCSSCEEEETTSCCCEEEECHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHH----cCCCEEEEEecccccccCcccccc----ccccCCCceEEEccCCCceEEecCHHHHHHHHH
Confidence            899999999998854    689999999999999764321110    0000112211 12  333899999999999999


Q ss_pred             Hhhccccc-CceEEEe--cCCcCHHHHHHHHHHhCCC
Q 039049          235 LAMEETRA-SGRLICS--SSVAHWSPIIEMLKATYPS  268 (305)
Q Consensus       235 ~~~~~~~~-~~~~~~~--~~~~s~~el~~~i~~~~~~  268 (305)
                      .+++++.. ++.|++.  ++.+|+.|+++.+.+.+|.
T Consensus       207 ~~l~~~~~~~~~~~i~g~~~~~s~~e~~~~~~~~~g~  243 (346)
T 3i6i_A          207 KTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKIGR  243 (346)
T ss_dssp             HHTTCGGGTTEEEECCCGGGEECHHHHHHHHHHHHTS
T ss_pred             HHHhCccccCeEEEEeCCCCCCCHHHHHHHHHHHHCC
Confidence            99998765 5568875  5799999999999999875

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.97  E-value=2.2e-31  Score=225.72  Aligned_cols=223  Identities=14%  Similarity=0.079  Sum_probs=172.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC-CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG-HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      |+|+||||||+||+++++.|+++| ++|++++|++.+... ..+.     ..+++++++|+.|++.+.++++++|+|||+
T Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~-~~l~-----~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~   79 (299)
T 2wm3_A            6 KLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA-KELR-----LQGAEVVQGDQDDQVIMELALNGAYATFIV   79 (299)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH-HHHH-----HTTCEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH-HHHH-----HCCCEEEEecCCCHHHHHHHHhcCCEEEEe
Confidence            689999999999999999999999 999999998764321 1111     126889999999999999999999999999


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHH
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYA  160 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  160 (305)
                      ++.....        ..+.|+.++.+++++|++. ++++||++||..++...          +..   +.      ..|+
T Consensus        80 a~~~~~~--------~~~~~~~~~~~~~~aa~~~-gv~~iv~~S~~~~~~~~----------~~~---~~------~~y~  131 (299)
T 2wm3_A           80 TNYWESC--------SQEQEVKQGKLLADLARRL-GLHYVVYSGLENIKKLT----------AGR---LA------AAHF  131 (299)
T ss_dssp             CCHHHHT--------CHHHHHHHHHHHHHHHHHH-TCSEEEECCCCCHHHHT----------TTS---CC------CHHH
T ss_pred             CCCCccc--------cchHHHHHHHHHHHHHHHc-CCCEEEEEcCccccccC----------CCc---cc------Cchh
Confidence            9863311        2456788999999999998 99999998886654321          111   11      5699


Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcC--C--CCCCCCCccceeHHHHHHHHHHh
Q 039049          161 YAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGL--R--GEYPNTTVGFVHIDDVVGAHILA  236 (305)
Q Consensus       161 ~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~i~v~D~a~~~~~~  236 (305)
                      .+|..+|.+++.    .+++++++||+.+||+........      ....+.  .  ...++..++|+|++|+|+++..+
T Consensus       132 ~sK~~~e~~~~~----~gi~~~ilrp~~~~~~~~~~~~~~------~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  201 (299)
T 2wm3_A          132 DGKGEVEEYFRD----IGVPMTSVRLPCYFENLLSHFLPQ------KAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSL  201 (299)
T ss_dssp             HHHHHHHHHHHH----HTCCEEEEECCEEGGGGGTTTCCE------ECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHH
T ss_pred             hHHHHHHHHHHH----CCCCEEEEeecHHhhhchhhcCCc------ccCCCCEEEEEecCCCCccceecHHHHHHHHHHH
Confidence            999999998854    589999999999999854311110      001221  1  12355588999999999999999


Q ss_pred             hcccc--cCceEEEecCCcCHHHHHHHHHHhCCC
Q 039049          237 MEETR--ASGRLICSSSVAHWSPIIEMLKATYPS  268 (305)
Q Consensus       237 ~~~~~--~~~~~~~~~~~~s~~el~~~i~~~~~~  268 (305)
                      ++++.  .+..|+++++.+|+.|+++.+.+.+|.
T Consensus       202 l~~~~~~~g~~~~~~g~~~s~~e~~~~~~~~~g~  235 (299)
T 2wm3_A          202 LKMPEKYVGQNIGLSTCRHTAEEYAALLTKHTRK  235 (299)
T ss_dssp             HHSHHHHTTCEEECCSEEECHHHHHHHHHHHHSS
T ss_pred             HcChhhhCCeEEEeeeccCCHHHHHHHHHHHHCC
Confidence            98753  456799987889999999999999875

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.97  E-value=3.5e-30  Score=211.68  Aligned_cols=206  Identities=16%  Similarity=0.115  Sum_probs=159.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC--eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH--MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~   79 (305)
                      |+|+||||+|+||++++++|+++|+  +|++++|++.+.....        ..++.++.+|+.|.+++.++++++|+|||
T Consensus        19 ~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~~~d~vi~   90 (242)
T 2bka_A           19 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA--------YKNVNQEVVDFEKLDDYASAFQGHDVGFC   90 (242)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG--------GGGCEEEECCGGGGGGGGGGGSSCSEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc--------cCCceEEecCcCCHHHHHHHhcCCCEEEE
Confidence            6899999999999999999999999  9999999876443211        12678999999999999999999999999


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhH
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWY  159 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y  159 (305)
                      |||....   ...+...+++|+.++.++++++++. ++++||++||.++++..                 .      +.|
T Consensus        91 ~ag~~~~---~~~~~~~~~~n~~~~~~~~~~~~~~-~~~~iv~~SS~~~~~~~-----------------~------~~Y  143 (242)
T 2bka_A           91 CLGTTRG---KAGAEGFVRVDRDYVLKSAELAKAG-GCKHFNLLSSKGADKSS-----------------N------FLY  143 (242)
T ss_dssp             CCCCCHH---HHHHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTTC-----------------S------SHH
T ss_pred             CCCcccc---cCCcccceeeeHHHHHHHHHHHHHC-CCCEEEEEccCcCCCCC-----------------c------chH
Confidence            9997643   2345668899999999999999988 88999999998865421                 1      569


Q ss_pred             HHHHHHHHHHHHHHHHHcCC-cEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhc
Q 039049          160 AYAKTIAEKEAWRIAKDCGI-DMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAME  238 (305)
Q Consensus       160 ~~sK~~~E~~~~~~~~~~~~-~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  238 (305)
                      +.+|..+|.+++.    .++ +++++||+.+||+.....  ....+........+..+  +...+++++|+|++++.+++
T Consensus       144 ~~sK~~~e~~~~~----~~~~~~~~vrpg~v~~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~dva~~~~~~~~  215 (242)
T 2bka_A          144 LQVKGEVEAKVEE----LKFDRYSVFRPGVLLCDRQESR--PGEWLVRKFFGSLPDSW--ASGHSVPVVTVVRAMLNNVV  215 (242)
T ss_dssp             HHHHHHHHHHHHT----TCCSEEEEEECCEEECTTGGGS--HHHHHHHHHHCSCCTTG--GGGTEEEHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHh----cCCCCeEEEcCceecCCCCCCc--HHHHHHHHhhcccCccc--cCCcccCHHHHHHHHHHHHh
Confidence            9999999998854    478 599999999999964321  11112222222222111  13468999999999999999


Q ss_pred             ccccCceEEEec
Q 039049          239 ETRASGRLICSS  250 (305)
Q Consensus       239 ~~~~~~~~~~~~  250 (305)
                      ++...+.+++++
T Consensus       216 ~~~~~~~~~~~~  227 (242)
T 2bka_A          216 RPRDKQMELLEN  227 (242)
T ss_dssp             SCCCSSEEEEEH
T ss_pred             CccccCeeEeeH
Confidence            887777777654

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.97  E-value=6.2e-32  Score=218.16  Aligned_cols=197  Identities=15%  Similarity=0.108  Sum_probs=156.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC--eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH--MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~   79 (305)
                      |+|+||||+|+||+++++.|+++|+  +|++++|++.+.            ..+++++.+|+.|.+.+.+++  +|+|||
T Consensus         6 ~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~~------------~~~~~~~~~D~~~~~~~~~~~--~d~vi~   71 (215)
T 2a35_A            6 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE------------HPRLDNPVGPLAELLPQLDGS--IDTAFC   71 (215)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC------------CTTEECCBSCHHHHGGGCCSC--CSEEEE
T ss_pred             ceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCccc------------CCCceEEeccccCHHHHHHhh--hcEEEE
Confidence            5899999999999999999999998  999999987641            236788899999988888877  999999


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhH
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWY  159 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y  159 (305)
                      +|+.....  ...+...+++|+.++.++++++++. ++++||++||..+++.                 +.      +.|
T Consensus        72 ~a~~~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~-----------------~~------~~y  125 (215)
T 2a35_A           72 CLGTTIKE--AGSEEAFRAVDFDLPLAVGKRALEM-GARHYLVVSALGADAK-----------------SS------IFY  125 (215)
T ss_dssp             CCCCCHHH--HSSHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTT-----------------CS------SHH
T ss_pred             Ceeecccc--CCCHHHHHHhhHHHHHHHHHHHHHc-CCCEEEEECCcccCCC-----------------Cc------cHH
Confidence            99976532  2356668899999999999999998 8899999999887532                 11      679


Q ss_pred             HHHHHHHHHHHHHHHHHcCCc-EEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhc
Q 039049          160 AYAKTIAEKEAWRIAKDCGID-MVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAME  238 (305)
Q Consensus       160 ~~sK~~~E~~~~~~~~~~~~~-~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  238 (305)
                      +.+|..+|.+++.    .+++ ++++||+.+||+......      +.... +....++++.++++|++|+|++++.+++
T Consensus       126 ~~sK~~~e~~~~~----~~~~~~~~vrp~~v~g~~~~~~~------~~~~~-~~~~~~~~~~~~~i~~~Dva~~~~~~~~  194 (215)
T 2a35_A          126 NRVKGELEQALQE----QGWPQLTIARPSLLFGPREEFRL------AEILA-APIARILPGKYHGIEACDLARALWRLAL  194 (215)
T ss_dssp             HHHHHHHHHHHTT----SCCSEEEEEECCSEESTTSCEEG------GGGTT-CCCC----CHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHH----cCCCeEEEEeCceeeCCCCcchH------HHHHH-HhhhhccCCCcCcEeHHHHHHHHHHHHh
Confidence            9999999998854    5899 999999999999754211      11111 1112223347899999999999999999


Q ss_pred             ccccCceEEEec
Q 039049          239 ETRASGRLICSS  250 (305)
Q Consensus       239 ~~~~~~~~~~~~  250 (305)
                      ++. ++.||+++
T Consensus       195 ~~~-~~~~~i~~  205 (215)
T 2a35_A          195 EEG-KGVRFVES  205 (215)
T ss_dssp             CCC-SEEEEEEH
T ss_pred             cCC-CCceEEcH
Confidence            875 77899864

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.97  E-value=3.8e-29  Score=200.31  Aligned_cols=199  Identities=16%  Similarity=0.148  Sum_probs=153.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      |+|+||||+|+||++++++|+++|++|++++|++.+....        ...+++++++|+.|++.+.++++++|+|||+|
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   75 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE--------GPRPAHVVVGDVLQAADVDKTVAGQDAVIVLL   75 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS--------SCCCSEEEESCTTSHHHHHHHHTTCSEEEECC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc--------cCCceEEEEecCCCHHHHHHHHcCCCEEEECc
Confidence            6899999999999999999999999999999987543211        12378999999999999999999999999999


Q ss_pred             cccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHHH
Q 039049           82 SPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAY  161 (305)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~  161 (305)
                      +.....       ...++|+.++.++++++++. ++++||++||.++++....    .+       .+.      ..|+.
T Consensus        76 ~~~~~~-------~~~~~n~~~~~~~~~~~~~~-~~~~~v~~Ss~~~~~~~~~----~~-------~~~------~~y~~  130 (206)
T 1hdo_A           76 GTRNDL-------SPTTVMSEGARNIVAAMKAH-GVDKVVACTSAFLLWDPTK----VP-------PRL------QAVTD  130 (206)
T ss_dssp             CCTTCC-------SCCCHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCTTC----SC-------GGG------HHHHH
T ss_pred             cCCCCC-------CccchHHHHHHHHHHHHHHh-CCCeEEEEeeeeeccCccc----cc-------ccc------hhHHH
Confidence            976531       12468999999999999998 8899999999987654211    00       022      77999


Q ss_pred             HHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCC-ccceeHHHHHHHHHHhhccc
Q 039049          162 AKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTT-VGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       162 sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~D~a~~~~~~~~~~  240 (305)
                      +|..+|.+++    ..+++++++||+.+ ++.........         .    +.... .++++++|+|++++.+++++
T Consensus       131 ~K~~~e~~~~----~~~i~~~~lrp~~~-~~~~~~~~~~~---------~----~~~~~~~~~i~~~Dva~~~~~~~~~~  192 (206)
T 1hdo_A          131 DHIRMHKVLR----ESGLKYVAVMPPHI-GDQPLTGAYTV---------T----LDGRGPSRVISKHDLGHFMLRCLTTD  192 (206)
T ss_dssp             HHHHHHHHHH----HTCSEEEEECCSEE-ECCCCCSCCEE---------E----SSSCSSCSEEEHHHHHHHHHHTTSCS
T ss_pred             HHHHHHHHHH----hCCCCEEEEeCCcc-cCCCCCcceEe---------c----ccCCCCCCccCHHHHHHHHHHHhcCc
Confidence            9999999883    46899999999998 33321111000         0    01112 58999999999999999987


Q ss_pred             cc-CceEEEecC
Q 039049          241 RA-SGRLICSSS  251 (305)
Q Consensus       241 ~~-~~~~~~~~~  251 (305)
                      .. +..|+++++
T Consensus       193 ~~~g~~~~i~~g  204 (206)
T 1hdo_A          193 EYDGHSTYPSHQ  204 (206)
T ss_dssp             TTTTCEEEEECC
T ss_pred             cccccceeeecc
Confidence            64 557898754

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.97  E-value=1.6e-29  Score=212.43  Aligned_cols=239  Identities=17%  Similarity=0.132  Sum_probs=170.6

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      ||+++||||+|+||++++++|+++|++|++++|+.+......   ..  ...++.++++|+.|.+++.++++       +
T Consensus         5 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~---~~--~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   79 (281)
T 3m1a_A            5 AKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLV---AA--YPDRAEAISLDVTDGERIDVVAADVLARYGR   79 (281)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHH---HH--CTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---Hh--ccCCceEEEeeCCCHHHHHHHHHHHHHhCCC
Confidence            368999999999999999999999999999999876433221   11  13478999999999998888775       7


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHH----HHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKG----TLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~----~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|+||||||......    ..+.+...+++|+.+    ++.++..+++. +.++||++||...+.+.+.           
T Consensus        80 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~~-----------  147 (281)
T 3m1a_A           80 VDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRER-GSGSVVNISSFGGQLSFAG-----------  147 (281)
T ss_dssp             CSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTCCCTT-----------
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEEcCccccCCCCC-----------
Confidence            899999999865432    445667789999999    55555555666 6789999999875443211           


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCC----chHHHHHHHHhcCCCCCCC
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPT----STLLLILAMVKGLRGEYPN  218 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~  218 (305)
                          .      ..|+.||.+.|.+.+.++.+   ++++++++||+.+.++.......    ....+..............
T Consensus       148 ----~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (281)
T 3m1a_A          148 ----F------SAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGS  217 (281)
T ss_dssp             ----C------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-
T ss_pred             ----c------hHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhc
Confidence                1      77999999999999999887   68999999999998876432211    0111111111111100111


Q ss_pred             CCccceeHHHHHHHHHHhhcccccCceEEEec-CCcCHHHHHHHHHHhC
Q 039049          219 TTVGFVHIDDVVGAHILAMEETRASGRLICSS-SVAHWSPIIEMLKATY  266 (305)
Q Consensus       219 ~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~-~~~s~~el~~~i~~~~  266 (305)
                      ....+.+++|+|++++.+++.+..+..|++++ ....+.+....+.+.+
T Consensus       218 ~~~~~~~~~dva~a~~~~~~~~~~~~~~~l~s~~~~~i~g~~~~i~~~~  266 (281)
T 3m1a_A          218 DGSQPGDPAKAAAAIRLALDTEKTPLRLALGGDAVDFLTGHLDSVRAEL  266 (281)
T ss_dssp             ----CBCHHHHHHHHHHHHHSSSCCSEEEESHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCHHHHHHHHHHHHhCCCCCeEEecCchHHHHHHHHHHHHHHHH
Confidence            25668899999999999999988888899864 4555666666665544

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.97  E-value=6.9e-30  Score=220.93  Aligned_cols=223  Identities=16%  Similarity=0.149  Sum_probs=166.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEcc-CCCcchHHHHhcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKAD-LLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D-~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      |+|+|||||||||++|++.|+++|++|++++|++++.. ...+..    ..+++++.+| +.|++++.++++++|+|||+
T Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-~~~l~~----~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~   80 (352)
T 1xgk_A            6 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI-AEELQA----IPNVTLFQGPLLNNVPLMDTLFEGAHLAFIN   80 (352)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH-HHHHHT----STTEEEEESCCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh-HHHHhh----cCCcEEEECCccCCHHHHHHHHhcCCEEEEc
Confidence            67999999999999999999999999999999876431 111211    1368899999 99999999999999999999


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCC-ccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhH
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKS-VKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWY  159 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y  159 (305)
                      ++...           ...|..+ .+++++|++. + +++|||+||..+.          ...+    .+.      +.|
T Consensus        81 a~~~~-----------~~~~~~~-~~l~~aa~~~-g~v~~~V~~SS~~~~----------~~~~----~~~------~~y  127 (352)
T 1xgk_A           81 TTSQA-----------GDEIAIG-KDLADAAKRA-GTIQHYIYSSMPDHS----------LYGP----WPA------VPM  127 (352)
T ss_dssp             CCSTT-----------SCHHHHH-HHHHHHHHHH-SCCSEEEEEECCCGG----------GTSS----CCC------CTT
T ss_pred             CCCCC-----------cHHHHHH-HHHHHHHHHc-CCccEEEEeCCcccc----------ccCC----CCC------ccH
Confidence            87532           1346666 9999999998 8 9999999997520          0000    111      559


Q ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCC----CCCCCCCccceeH-HHHHHHHH
Q 039049          160 AYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLR----GEYPNTTVGFVHI-DDVVGAHI  234 (305)
Q Consensus       160 ~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~v-~D~a~~~~  234 (305)
                      +.+|..+|++++.    .+++++++||+ +||+.........+. ......+..    ...+++.++++|+ +|+|++++
T Consensus       128 ~~sK~~~E~~~~~----~gi~~~ivrpg-~~g~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~  201 (352)
T 1xgk_A          128 WAPKFTVENYVRQ----LGLPSTFVYAG-IYNNNFTSLPYPLFQ-MELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALL  201 (352)
T ss_dssp             THHHHHHHHHHHT----SSSCEEEEEEC-EEGGGCBSSSCSSCB-EEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH----cCCCEEEEecc-eecCCchhccccccc-ccccCCCceEEeeccCCCCceeeEecHHHHHHHHH
Confidence            9999999999864    48999999986 688865322111000 000012221    1124558899999 99999999


Q ss_pred             Hhhcccc---cCceEEEecCCcCHHHHHHHHHHhCCC
Q 039049          235 LAMEETR---ASGRLICSSSVAHWSPIIEMLKATYPS  268 (305)
Q Consensus       235 ~~~~~~~---~~~~~~~~~~~~s~~el~~~i~~~~~~  268 (305)
                      .+++++.   .++.||++++.+|+.|+++.+.+.+|.
T Consensus       202 ~~l~~~~~~~~g~~~~l~~~~~s~~e~~~~i~~~~G~  238 (352)
T 1xgk_A          202 QIFKDGPQKWNGHRIALTFETLSPVQVCAAFSRALNR  238 (352)
T ss_dssp             HHHHHCHHHHTTCEEEECSEEECHHHHHHHHHHHHTS
T ss_pred             HHHhCCchhhCCeEEEEecCCCCHHHHHHHHHHHHCC
Confidence            9998753   467899987789999999999999875

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.96  E-value=1.7e-28  Score=205.73  Aligned_cols=238  Identities=17%  Similarity=0.171  Sum_probs=176.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+|+||||+|+||++++++|+++|++|++++|+........  ... ....++.++++|+.|.+++.++++       ++
T Consensus        17 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~--~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   93 (278)
T 2bgk_A           17 KVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVC--NNI-GSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL   93 (278)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--HHH-CCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHH--HHh-CCCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            67999999999999999999999999999998754322211  111 112368999999999998888876       78


Q ss_pred             CEEEEeccccccC------CCCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           75 DGVFHTASPVLVP------YDNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        75 d~Vi~~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      |+||||||.....      ...+.+...+++|+.++.++++++...   .+.++||++||..++.+.+            
T Consensus        94 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------  161 (278)
T 2bgk_A           94 DIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE------------  161 (278)
T ss_dssp             CEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT------------
T ss_pred             CEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCC------------
Confidence            9999999976421      133566778999999999999987653   1567999999988655421            


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                        .+.      ..|+.+|.+.|.+++.++.+   .+++++++||+.++++....................+    .....
T Consensus       162 --~~~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~----~~~~~  229 (278)
T 2bgk_A          162 --GVS------HVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAA----NLKGT  229 (278)
T ss_dssp             --TSC------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTC----SSCSC
T ss_pred             --CCC------cchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhccc----ccccc
Confidence              011      67999999999999988876   5899999999999999754322211222222222211    11456


Q ss_pred             ceeHHHHHHHHHHhhcccc---cCceEEEe-cCCcCHHHHHHHHHHhC
Q 039049          223 FVHIDDVVGAHILAMEETR---ASGRLICS-SSVAHWSPIIEMLKATY  266 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~---~~~~~~~~-~~~~s~~el~~~i~~~~  266 (305)
                      +++++|+|++++.++..+.   .+..|++. +..+++.|+++.+.+.+
T Consensus       230 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~~  277 (278)
T 2bgk_A          230 LLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHGL  277 (278)
T ss_dssp             CCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSCC
T ss_pred             cCCHHHHHHHHHHHcCcccccCCCCEEEECCcccccCCccchhhhhhc
Confidence            8999999999999997643   24568886 56899999999887654

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.96  E-value=3.3e-29  Score=213.64  Aligned_cols=230  Identities=19%  Similarity=0.213  Sum_probs=165.2

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcc--cchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDL--SKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      ||+|+|||||||||+++++.|++.|++|++++|+....  .....+..+.  ..+++++++|+.|++++.++++++|+||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~l~~~~~~~d~vi   81 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK--QLGAKLIEASLDDHQRLVDALKQVDVVI   81 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH--TTTCEEECCCSSCHHHHHHHHTTCSEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHH--hCCeEEEeCCCCCHHHHHHHHhCCCEEE
Confidence            57899999999999999999999999999999986532  1111121111  2378999999999999999999999999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCC-ccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccch
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKS-VKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNL  157 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  157 (305)
                      |+++....           ..|+.++.+++++|++. + +++||+ |+   |+....    .+   +.+..|.     ..
T Consensus        82 ~~a~~~~~-----------~~~~~~~~~l~~aa~~~-g~v~~~v~-S~---~g~~~~----~~---~~~~~p~-----~~  133 (313)
T 1qyd_A           82 SALAGGVL-----------SHHILEQLKLVEAIKEA-GNIKRFLP-SE---FGMDPD----IM---EHALQPG-----SI  133 (313)
T ss_dssp             ECCCCSSS-----------STTTTTHHHHHHHHHHS-CCCSEEEC-SC---CSSCTT----SC---CCCCSST-----TH
T ss_pred             ECCccccc-----------hhhHHHHHHHHHHHHhc-CCCceEEe-cC---CcCCcc----cc---ccCCCCC-----cc
Confidence            99997542           13677899999999998 7 999996 43   332111    11   1222221     15


Q ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCC-CCC--CCCCccceeHHHHHHHHH
Q 039049          158 WYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLR-GEY--PNTTVGFVHIDDVVGAHI  234 (305)
Q Consensus       158 ~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~i~v~D~a~~~~  234 (305)
                      .| .+|..+|++++    +.+++++++||+.++|+..........   .....+.. ..+  ++..++|+|++|+|+++.
T Consensus       134 ~y-~sK~~~e~~~~----~~g~~~~ilrp~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~  205 (313)
T 1qyd_A          134 TF-IDKRKVRRAIE----AASIPYTYVSSNMFAGYFAGSLAQLDG---HMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTI  205 (313)
T ss_dssp             HH-HHHHHHHHHHH----HTTCCBCEEECCEEHHHHTTTSSCTTC---CSSCCSSEECCBTTSCSEEEEECHHHHHHHHH
T ss_pred             hH-HHHHHHHHHHH----hcCCCeEEEEeceeccccccccccccc---cccCCCCeEEEeCCCCceEEEEEHHHHHHHHH
Confidence            68 99999999884    468999999999998864321110000   00011111 122  334789999999999999


Q ss_pred             Hhhccccc-CceEEEe--cCCcCHHHHHHHHHHhCCC
Q 039049          235 LAMEETRA-SGRLICS--SSVAHWSPIIEMLKATYPS  268 (305)
Q Consensus       235 ~~~~~~~~-~~~~~~~--~~~~s~~el~~~i~~~~~~  268 (305)
                      .+++++.. ++.|++.  ++.+|+.|+++.+.+.+|.
T Consensus       206 ~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~  242 (313)
T 1qyd_A          206 KSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQ  242 (313)
T ss_dssp             HHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTC
T ss_pred             HHHhCcccCCceEEEeCCCCccCHHHHHHHHHHhcCC
Confidence            99988754 4567764  4689999999999999875

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.96  E-value=1.3e-29  Score=209.90  Aligned_cols=229  Identities=18%  Similarity=0.122  Sum_probs=159.1

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc----CCCE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ----GVDG   76 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----~~d~   76 (305)
                      ||+||||||+|+||+++++.|+++|++|++++|++++...               .+++|+.|.+++.++++    ++|+
T Consensus         1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------------~~~~D~~~~~~~~~~~~~~~~~~d~   65 (255)
T 2dkn_A            1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA---------------DLSTPGGRETAVAAVLDRCGGVLDG   65 (255)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------------CTTSHHHHHHHHHHHHHHHTTCCSE
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc---------------cccCCcccHHHHHHHHHHcCCCccE
Confidence            7899999999999999999999999999999998764321               15689999888888876    8999


Q ss_pred             EEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCC-------CCC
Q 039049           77 VFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNE-------SHW  146 (305)
Q Consensus        77 Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E-------~~~  146 (305)
                      ||||||....   ...+...+++|+.++.++++++...   .+.++||++||..+++.....   .+..|       +.+
T Consensus        66 vi~~Ag~~~~---~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~---~~~~~~~~~~~~~~~  139 (255)
T 2dkn_A           66 LVCCAGVGVT---AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAE---LPMVEAMLAGDEARA  139 (255)
T ss_dssp             EEECCCCCTT---SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGG---CHHHHHHHHTCHHHH
T ss_pred             EEECCCCCCc---chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccc---cchhhhhcccchhhh
Confidence            9999998652   3456778999999999999987543   256899999999887643110   11111       000


Q ss_pred             CCc-ccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          147 SDP-DYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       147 ~~~-~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                      ... .....+.+.|+.+|.+.|.+++.++.+   .+++++++||+.++|+.........  ........  . .+ ..++
T Consensus       140 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~--~~~~~~~~--~-~~-~~~~  213 (255)
T 2dkn_A          140 IELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADP--RYGESTRR--F-VA-PLGR  213 (255)
T ss_dssp             HHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCT--TTHHHHHS--C-CC-TTSS
T ss_pred             hhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccch--hhHHHHHH--H-HH-HhcC
Confidence            000 000001267999999999999888766   6899999999999997421100000  00011111  0 12 3567


Q ss_pred             ceeHHHHHHHHHHhhcccc---cCceEEEec-CCcCHH
Q 039049          223 FVHIDDVVGAHILAMEETR---ASGRLICSS-SVAHWS  256 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~---~~~~~~~~~-~~~s~~  256 (305)
                      +++++|+|++++.+++.+.   .+..|++++ ..++++
T Consensus       214 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~  251 (255)
T 2dkn_A          214 GSEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDALMR  251 (255)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHHC
T ss_pred             CCCHHHHHHHHHHHhCCCcccceeeEEEecCCeEeeee
Confidence            9999999999999998762   355788864 344443

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.96  E-value=6.1e-28  Score=199.85  Aligned_cols=222  Identities=14%  Similarity=0.055  Sum_probs=165.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+|+||||+|+||+++++.|+++|++|++++|+.+......  ........++.++.+|+.|++++.++++       ++
T Consensus        12 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   89 (255)
T 1fmc_A           12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVV--DEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHH--HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH--HHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            67999999999999999999999999999999865332211  1111123478899999999998888876       79


Q ss_pred             CEEEEeccccccC---CCCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           75 DGVFHTASPVLVP---YDNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        75 d~Vi~~a~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      |+|||+||.....   ...+.+...+++|+.++.++++++.    +. +.++||++||..++.+...             
T Consensus        90 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~~-------------  155 (255)
T 1fmc_A           90 DILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKN-GGGVILTITSMAAENKNIN-------------  155 (255)
T ss_dssp             CEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTCCCTT-------------
T ss_pred             CEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcchhhcCCCCC-------------
Confidence            9999999986542   1345667789999999999998874    34 6689999999876543211             


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccce
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFV  224 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  224 (305)
                        .      ..|+.+|.+.|.+++.++.+.   +++++++||+.++++......  ..........+.+      ...++
T Consensus       156 --~------~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~~------~~~~~  219 (255)
T 1fmc_A          156 --M------TSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI--TPEIEQKMLQHTP------IRRLG  219 (255)
T ss_dssp             --C------HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC--CHHHHHHHHHTCS------SCSCB
T ss_pred             --C------cccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhcc--ChHHHHHHHhcCC------cccCC
Confidence              1      679999999999999888765   899999999999987532211  1222333333332      35688


Q ss_pred             eHHHHHHHHHHhhcccc---cCceEEEe-cCCcCH
Q 039049          225 HIDDVVGAHILAMEETR---ASGRLICS-SSVAHW  255 (305)
Q Consensus       225 ~v~D~a~~~~~~~~~~~---~~~~~~~~-~~~~s~  255 (305)
                      +++|+|++++.+++.+.   .+..|+++ |..+|+
T Consensus       220 ~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~s~  254 (255)
T 1fmc_A          220 QPQDIANAALFLCSPAASWVSGQILTVSGGGVQEL  254 (255)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCCC
T ss_pred             CHHHHHHHHHHHhCCccccCCCcEEEECCceeccC
Confidence            99999999999997643   35578986 455554

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.96  E-value=1.6e-28  Score=208.87  Aligned_cols=224  Identities=17%  Similarity=0.155  Sum_probs=160.8

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcc----cchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDL----SKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDG   76 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   76 (305)
                      ||+|+||||||+||+++++.|++.|++|++++|++...    .+...+..+.  ..+++++++|+.|++++.++++++|+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d~~~l~~~~~~~d~   79 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQ--SLGVILLEGDINDHETLVKAIKQVDI   79 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHH--HTTCEEEECCTTCHHHHHHHHTTCSE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHH--hCCCEEEEeCCCCHHHHHHHHhCCCE
Confidence            78999999999999999999999999999999986211    1111111111  23689999999999999999999999


Q ss_pred             EEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCC-ccEEEEeccceeeeccCCCCCCcccCCCCCCCccccccc
Q 039049           77 VFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKS-VKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHY  155 (305)
Q Consensus        77 Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  155 (305)
                      |||+|+...               +.++.+++++|++. + +++||+ |+   ++..        .+|..+..|.     
T Consensus        80 vi~~a~~~~---------------~~~~~~l~~aa~~~-g~v~~~v~-S~---~g~~--------~~~~~~~~p~-----  126 (307)
T 2gas_A           80 VICAAGRLL---------------IEDQVKIIKAIKEA-GNVKKFFP-SE---FGLD--------VDRHDAVEPV-----  126 (307)
T ss_dssp             EEECSSSSC---------------GGGHHHHHHHHHHH-CCCSEEEC-SC---CSSC--------TTSCCCCTTH-----
T ss_pred             EEECCcccc---------------cccHHHHHHHHHhc-CCceEEee-cc---cccC--------cccccCCCcc-----
Confidence            999998642               44678999999998 7 999984 32   3321        1222333331     


Q ss_pred             chhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCC-CC--CCCCccceeHHHHHHH
Q 039049          156 NLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRG-EY--PNTTVGFVHIDDVVGA  232 (305)
Q Consensus       156 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~i~v~D~a~~  232 (305)
                      .+.| .+|..+|.+++    ..+++++++||+.++++.........    .....+... ..  ++..++|++++|+|++
T Consensus       127 ~~~y-~sK~~~e~~~~----~~~i~~~~lrp~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  197 (307)
T 2gas_A          127 RQVF-EEKASIRRVIE----AEGVPYTYLCCHAFTGYFLRNLAQLD----ATDPPRDKVVILGDGNVKGAYVTEADVGTF  197 (307)
T ss_dssp             HHHH-HHHHHHHHHHH----HHTCCBEEEECCEETTTTGGGTTCTT----CSSCCSSEEEEETTSCSEEEEECHHHHHHH
T ss_pred             hhHH-HHHHHHHHHHH----HcCCCeEEEEcceeeccccccccccc----cccCCCCeEEEecCCCcceEEeeHHHHHHH
Confidence            1569 99999998875    45899999999999886432110000    000011111 12  2347899999999999


Q ss_pred             HHHhhccccc-CceEEEe--cCCcCHHHHHHHHHHhCCC
Q 039049          233 HILAMEETRA-SGRLICS--SSVAHWSPIIEMLKATYPS  268 (305)
Q Consensus       233 ~~~~~~~~~~-~~~~~~~--~~~~s~~el~~~i~~~~~~  268 (305)
                      +..+++++.. ++.|++.  ++.+|+.|+++.+.+.+|.
T Consensus       198 ~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~  236 (307)
T 2gas_A          198 TIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGK  236 (307)
T ss_dssp             HHHHHTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTS
T ss_pred             HHHHHcCccccCceEEEeCCCCcCCHHHHHHHHHHHhCC
Confidence            9999987654 4456664  4689999999999999875

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.96  E-value=9.6e-29  Score=210.31  Aligned_cols=224  Identities=21%  Similarity=0.279  Sum_probs=162.0

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcc---cchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDL---SKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGV   77 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~V   77 (305)
                      ||+|+|||||||||+++++.|++.|++|++++|+....   .....+..+.  ..+++++++|+.|++++.++++++|+|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d~~~l~~~~~~~d~v   81 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDHASLVEAVKNVDVV   81 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH--TTTCEEECCCTTCHHHHHHHHHTCSEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHH--hCCCEEEEeccCCHHHHHHHHcCCCEE
Confidence            57899999999999999999999999999999986532   1111111111  237899999999999999999999999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCC-ccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccc
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKS-VKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYN  156 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  156 (305)
                      ||+|+...               +.++.+++++|+++ + +++||+ |+   ++.        ..+|..+..|.     .
T Consensus        82 i~~a~~~~---------------~~~~~~l~~aa~~~-g~v~~~v~-S~---~g~--------~~~~~~~~~p~-----~  128 (308)
T 1qyc_A           82 ISTVGSLQ---------------IESQVNIIKAIKEV-GTVKRFFP-SE---FGN--------DVDNVHAVEPA-----K  128 (308)
T ss_dssp             EECCCGGG---------------SGGGHHHHHHHHHH-CCCSEEEC-SC---CSS--------CTTSCCCCTTH-----H
T ss_pred             EECCcchh---------------hhhHHHHHHHHHhc-CCCceEee-cc---ccc--------CccccccCCcc-----h
Confidence            99998632               34578999999998 7 999984 43   332        11233333332     1


Q ss_pred             hhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCC-CCC--CCCCccceeHHHHHHHH
Q 039049          157 LWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLR-GEY--PNTTVGFVHIDDVVGAH  233 (305)
Q Consensus       157 ~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~i~v~D~a~~~  233 (305)
                      ..| .+|..+|++++    +.+++++++||+.++|+.........    .....+.. ...  ++..++|+|++|+|+++
T Consensus       129 ~~y-~sK~~~e~~~~----~~~~~~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  199 (308)
T 1qyc_A          129 SVF-EVKAKVRRAIE----AEGIPYTYVSSNCFAGYFLRSLAQAG----LTAPPRDKVVILGDGNARVVFVKEEDIGTFT  199 (308)
T ss_dssp             HHH-HHHHHHHHHHH----HHTCCBEEEECCEEHHHHTTTTTCTT----CSSCCSSEEEEETTSCCEEEEECHHHHHHHH
T ss_pred             hHH-HHHHHHHHHHH----hcCCCeEEEEeceecccccccccccc----ccCCCCCceEEecCCCceEEEecHHHHHHHH
Confidence            568 99999998885    35899999999999886432111100    00001111 112  33478999999999999


Q ss_pred             HHhhccccc-CceEEEe--cCCcCHHHHHHHHHHhCCC
Q 039049          234 ILAMEETRA-SGRLICS--SSVAHWSPIIEMLKATYPS  268 (305)
Q Consensus       234 ~~~~~~~~~-~~~~~~~--~~~~s~~el~~~i~~~~~~  268 (305)
                      ..+++++.. ++.|++.  ++.+|+.|+++.+.+.+|.
T Consensus       200 ~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~  237 (308)
T 1qyc_A          200 IKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDK  237 (308)
T ss_dssp             HTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTS
T ss_pred             HHHHhCccccCeEEEEeCCCCccCHHHHHHHHHHHhCC
Confidence            999988654 4567764  4689999999999999975

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.96  E-value=2.8e-28  Score=208.63  Aligned_cols=221  Identities=17%  Similarity=0.173  Sum_probs=160.9

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCC-Ccc--cchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDP-EDL--SKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGV   77 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~-~~~--~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~V   77 (305)
                      ||+|+||||||+||++|++.|++.|++|++++|++ ...  .....+....  ..+++++++|+.|++++.++++++|+|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~--~~~v~~v~~D~~d~~~l~~a~~~~d~v   81 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFR--SMGVTIIEGEMEEHEKMVSVLKQVDIV   81 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHH--HTTCEEEECCTTCHHHHHHHHTTCSEE
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhh--cCCcEEEEecCCCHHHHHHHHcCCCEE
Confidence            68999999999999999999999999999999986 211  1111111111  236899999999999999999999999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCC-ccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccc
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKS-VKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYN  156 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  156 (305)
                      ||+|+...               +.++.+++++|++. + +++||+ |+   ++..        .+|..+..|.     .
T Consensus        82 i~~a~~~~---------------~~~~~~l~~aa~~~-g~v~~~v~-S~---~g~~--------~~~~~~~~p~-----~  128 (321)
T 3c1o_A           82 ISALPFPM---------------ISSQIHIINAIKAA-GNIKRFLP-SD---FGCE--------EDRIKPLPPF-----E  128 (321)
T ss_dssp             EECCCGGG---------------SGGGHHHHHHHHHH-CCCCEEEC-SC---CSSC--------GGGCCCCHHH-----H
T ss_pred             EECCCccc---------------hhhHHHHHHHHHHh-CCccEEec-cc---cccC--------ccccccCCCc-----c
Confidence            99998632               45578999999998 7 999983 32   3321        1232332221     1


Q ss_pred             hhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHH---HHhcCCC-CC--CCCCccceeHHHHH
Q 039049          157 LWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILA---MVKGLRG-EY--PNTTVGFVHIDDVV  230 (305)
Q Consensus       157 ~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~---~~~~~~~-~~--~~~~~~~i~v~D~a  230 (305)
                      +.| .+|..+|.+++    ..+++++++||+.++++..       ..+...   ...+... .+  ++..++|+|++|+|
T Consensus       129 ~~y-~sK~~~e~~~~----~~~~~~~~lrp~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  196 (321)
T 3c1o_A          129 SVL-EKKRIIRRAIE----AAALPYTYVSANCFGAYFV-------NYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIA  196 (321)
T ss_dssp             HHH-HHHHHHHHHHH----HHTCCBEEEECCEEHHHHH-------HHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHH
T ss_pred             hHH-HHHHHHHHHHH----HcCCCeEEEEeceeccccc-------cccccccccccccCceEEecCCCcceeEeeHHHHH
Confidence            569 99999999885    4589999999999887531       001100   0111111 12  33478999999999


Q ss_pred             HHHHHhhccccc-CceEEEe--cCCcCHHHHHHHHHHhCCC
Q 039049          231 GAHILAMEETRA-SGRLICS--SSVAHWSPIIEMLKATYPS  268 (305)
Q Consensus       231 ~~~~~~~~~~~~-~~~~~~~--~~~~s~~el~~~i~~~~~~  268 (305)
                      +++..+++++.. +..|++.  ++.+|+.|+++.+.+.+|.
T Consensus       197 ~~~~~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~g~  237 (321)
T 3c1o_A          197 KYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGL  237 (321)
T ss_dssp             HHHHHHHHCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTS
T ss_pred             HHHHHHHhCccccCeEEEEeCCCCcccHHHHHHHHHHHcCC
Confidence            999999988764 4557774  4789999999999999875

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.96  E-value=3.4e-28  Score=207.89  Aligned_cols=218  Identities=18%  Similarity=0.168  Sum_probs=158.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      ++|+||||||+||+++++.|++.|++|++++|++....  ..+..+.  ..+++++++|+.|++++.++++++|+|||+|
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~--~~~~~l~--~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a   87 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKT--TLLDEFQ--SLGAIIVKGELDEHEKLVELMKKVDVVISAL   87 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCH--HHHHHHH--HTTCEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchh--hHHHHhh--cCCCEEEEecCCCHHHHHHHHcCCCEEEECC
Confidence            48999999999999999999999999999999875211  1111111  2368999999999999999999999999999


Q ss_pred             cccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCC-ccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHH
Q 039049           82 SPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKS-VKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYA  160 (305)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  160 (305)
                      +...               +.++.+++++|++. + +++||+ |+   |+.        ..+|..+..|.     ...| 
T Consensus        88 ~~~~---------------~~~~~~l~~aa~~~-g~v~~~v~-S~---~g~--------~~~~~~~~~p~-----~~~y-  133 (318)
T 2r6j_A           88 AFPQ---------------ILDQFKILEAIKVA-GNIKRFLP-SD---FGV--------EEDRINALPPF-----EALI-  133 (318)
T ss_dssp             CGGG---------------STTHHHHHHHHHHH-CCCCEEEC-SC---CSS--------CTTTCCCCHHH-----HHHH-
T ss_pred             chhh---------------hHHHHHHHHHHHhc-CCCCEEEe-ec---ccc--------CcccccCCCCc-----chhH-
Confidence            8632               34578999999998 7 999985 43   332        11232332221     1568 


Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCC-CC--CCCCccceeHHHHHHHHHHhh
Q 039049          161 YAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRG-EY--PNTTVGFVHIDDVVGAHILAM  237 (305)
Q Consensus       161 ~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~i~v~D~a~~~~~~~  237 (305)
                      .+|..+|++++    +.+++++++||+.+++..       ...++.....+... ..  ++..++|+|++|+++++..++
T Consensus       134 ~sK~~~e~~~~----~~~~~~~~lr~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l  202 (318)
T 2r6j_A          134 ERKRMIRRAIE----EANIPYTYVSANCFASYF-------INYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVA  202 (318)
T ss_dssp             HHHHHHHHHHH----HTTCCBEEEECCEEHHHH-------HHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHH----hcCCCeEEEEcceehhhh-------hhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHh
Confidence            99999998874    468999999999887642       11111111111111 12  234789999999999999999


Q ss_pred             ccccc-CceEEEe--cCCcCHHHHHHHHHHhCCC
Q 039049          238 EETRA-SGRLICS--SSVAHWSPIIEMLKATYPS  268 (305)
Q Consensus       238 ~~~~~-~~~~~~~--~~~~s~~el~~~i~~~~~~  268 (305)
                      +++.. ++.|++.  ++.+|+.|+++.+.+.+|.
T Consensus       203 ~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~  236 (318)
T 2r6j_A          203 TDPRALNRVVIYRPSTNIITQLELISRWEKKIGK  236 (318)
T ss_dssp             TCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTC
T ss_pred             cCccccCeEEEecCCCCccCHHHHHHHHHHHhCC
Confidence            88654 4556764  4689999999999999875

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.95  E-value=2.6e-27  Score=198.60  Aligned_cols=237  Identities=14%  Similarity=0.143  Sum_probs=158.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhh-hhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGF-LWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |+++||||+|+||+++++.|+++|++|++++|++++...... +........++.++++|+.|++++.++++       +
T Consensus         7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   86 (278)
T 1spx_A            7 KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGK   86 (278)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHcCC
Confidence            579999999999999999999999999999998654332111 10001223478899999999998888876       7


Q ss_pred             CCEEEEeccccccCC--------CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEecccee-eeccCCCCCCccc
Q 039049           74 VDGVFHTASPVLVPY--------DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSS-IRYRHDAQQVSPL  141 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~-~~~~~~~~~~~~~  141 (305)
                      +|+||||||......        ..+.+...+++|+.++.++++++...   .+ ++||++||... +.+.+.       
T Consensus        87 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~-------  158 (278)
T 1spx_A           87 LDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPD-------  158 (278)
T ss_dssp             CCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTT-------
T ss_pred             CCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCCCC-------
Confidence            999999999765321        34456778999999999999887653   14 79999999875 332111       


Q ss_pred             CCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCC---ch---HHHHHHHHhcC
Q 039049          142 NESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPT---ST---LLLILAMVKGL  212 (305)
Q Consensus       142 ~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~---~~---~~~~~~~~~~~  212 (305)
                              .      ..|+.||...+.+.+.++.+   ++++++++||+.++++.......   ..   ...........
T Consensus       159 --------~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (278)
T 1spx_A          159 --------F------PYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECV  224 (278)
T ss_dssp             --------S------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHC
T ss_pred             --------c------cHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcC
Confidence                    1      66999999999999888766   58999999999999986432110   00   00012222111


Q ss_pred             CCCCCCCCccceeHHHHHHHHHHhhcccc----cCceEEEe-cCCcCHHHHHHHHHHhC
Q 039049          213 RGEYPNTTVGFVHIDDVVGAHILAMEETR----ASGRLICS-SSVAHWSPIIEMLKATY  266 (305)
Q Consensus       213 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~----~~~~~~~~-~~~~s~~el~~~i~~~~  266 (305)
                      +      ...+.+++|+|+++++++..+.    .+..+++. |..+++.|+++.+.+.+
T Consensus       225 p------~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~  277 (278)
T 1spx_A          225 P------AGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL  277 (278)
T ss_dssp             T------TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred             C------CcCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence            1      2458999999999999997643    35568885 55899999999988754

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.95  E-value=5.2e-28  Score=205.23  Aligned_cols=237  Identities=12%  Similarity=0.063  Sum_probs=170.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchh-hhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVG-FLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |+|+||||+|+||+++++.|+++|++|++++|+........ .+....  ..++.++++|+.|.+++.++++       +
T Consensus        27 k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  104 (302)
T 1w6u_A           27 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT--GNKVHAIQCDVRDPDMVQNTVSELIKVAGH  104 (302)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--SSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc--CCceEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence            67999999999999999999999999999999865332211 111110  3478999999999998887765       4


Q ss_pred             CCEEEEeccccccC----CCCchhhhhhhhhHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVP----YDNNIQATLIDPCIKGTLNVLSSCKKA----KSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|+||||||.....    ...+.+...+++|+.++.++++++...    .+.++||++||..++.+.+.           
T Consensus       105 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-----------  173 (302)
T 1w6u_A          105 PNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGF-----------  173 (302)
T ss_dssp             CSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTT-----------
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCC-----------
Confidence            69999999975432    244567789999999999998887532    14579999999876543211           


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                          .      ..|+.+|.+.|.+.+.++.+   .+++++++||+.++++....................+      ...
T Consensus       174 ----~------~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p------~~~  237 (302)
T 1w6u_A          174 ----V------VPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIP------CGR  237 (302)
T ss_dssp             ----C------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCT------TSS
T ss_pred             ----c------chhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCC------cCC
Confidence                1      67999999999999998877   6899999999999987422111111111122222222      345


Q ss_pred             ceeHHHHHHHHHHhhcccc---cCceEEEe-cCCcCHHHHHHHHHHhCC
Q 039049          223 FVHIDDVVGAHILAMEETR---ASGRLICS-SSVAHWSPIIEMLKATYP  267 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~---~~~~~~~~-~~~~s~~el~~~i~~~~~  267 (305)
                      +++++|+|++++.++....   .+..|++. |..+++.++++.+.+..|
T Consensus       238 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g  286 (302)
T 1w6u_A          238 LGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTK  286 (302)
T ss_dssp             CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCH
T ss_pred             CCCHHHHHHHHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhcc
Confidence            8899999999999997643   35568886 456788888877777654

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.95  E-value=2.9e-27  Score=194.47  Aligned_cols=216  Identities=18%  Similarity=0.153  Sum_probs=161.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc---CCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ---GVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~Vi   78 (305)
                      |+|+||||+|+||+++++.|+++|++|++++|+.+.....   ...   ..+++++.+|+.|.+++.++++   ++|+||
T Consensus         8 ~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~---~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi   81 (244)
T 1cyd_A            8 LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSL---AKE---CPGIEPVCVDLGDWDATEKALGGIGPVDLLV   81 (244)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHH---STTCEEEECCTTCHHHHHHHHTTCCCCSEEE
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHh---ccCCCcEEecCCCHHHHHHHHHHcCCCCEEE
Confidence            6899999999999999999999999999999986433221   111   1256788999999999999886   479999


Q ss_pred             EeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CC-ccEEEEeccceeeeccCCCCCCcccCCCCCCCcc
Q 039049           79 HTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KS-VKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPD  150 (305)
Q Consensus        79 ~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~-~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~  150 (305)
                      |+||......    ..+.+...+++|+.++.++++++...   .+ .++||++||..++.+.+.               .
T Consensus        82 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---------------~  146 (244)
T 1cyd_A           82 NNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPN---------------L  146 (244)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT---------------B
T ss_pred             ECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCC---------------c
Confidence            9999765321    34566778999999999999887543   13 579999999876543211               1


Q ss_pred             cccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHH
Q 039049          151 YCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHID  227 (305)
Q Consensus       151 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  227 (305)
                            ..|+.+|.+.|.+++.++.+   .+++++++||+.++++....... ...++.....+.+      .+++++++
T Consensus       147 ------~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~------~~~~~~~~  213 (244)
T 1cyd_A          147 ------ITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSA-DPEFARKLKERHP------LRKFAEVE  213 (244)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTC-CHHHHHHHHHHST------TSSCBCHH
T ss_pred             ------chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcccccccc-CHHHHHHHHhcCC------ccCCCCHH
Confidence                  67999999999999998877   58999999999999975321111 1222333333333      47899999


Q ss_pred             HHHHHHHHhhccccc---CceEEEecC
Q 039049          228 DVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       228 D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      |+|++++.+++.+..   +..+++.+.
T Consensus       214 dva~~~~~l~~~~~~~~~G~~~~v~gG  240 (244)
T 1cyd_A          214 DVVNSILFLLSDRSASTSGGGILVDAG  240 (244)
T ss_dssp             HHHHHHHHHHSGGGTTCCSSEEEESTT
T ss_pred             HHHHHHHHHhCchhhcccCCEEEECCC
Confidence            999999999986532   445777543

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.95  E-value=1.6e-26  Score=191.89  Aligned_cols=222  Identities=17%  Similarity=0.126  Sum_probs=161.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+|+||||+|+||+++++.|+++|++|++++|+.+......  ..+.....++.++++|+.|.+++.++++       ++
T Consensus        14 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~--~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   91 (260)
T 3awd_A           14 RVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAV--EDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRV   91 (260)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999865332211  1111113478999999999998888775       68


Q ss_pred             CEEEEeccccc-cC----CCCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVL-VP----YDNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |+||||||... ..    ...+.+...+++|+.++.++++++...   .+.++||++||...+.+.+             
T Consensus        92 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-------------  158 (260)
T 3awd_A           92 DILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNR-------------  158 (260)
T ss_dssp             CEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCS-------------
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCC-------------
Confidence            99999999765 21    133455778999999999999887542   1567999999986543211             


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                      ..+.      ..|+.+|.+.|.+++.++.+   ++++++++||+.++++....... ..........+.+      ...+
T Consensus       159 ~~~~------~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~------~~~~  225 (260)
T 3awd_A          159 PQQQ------AAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGME-KPELYDAWIAGTP------MGRV  225 (260)
T ss_dssp             SSCC------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHT-CHHHHHHHHHTCT------TSSC
T ss_pred             CCCc------cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccC-ChHHHHHHHhcCC------cCCC
Confidence            1111      66999999999999998877   68999999999999986431100 1122233333322      3468


Q ss_pred             eeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          224 VHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      ++++|+|++++.++..+.   .+..+++++.
T Consensus       226 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  256 (260)
T 3awd_A          226 GQPDEVASVVQFLASDAASLMTGAIVNVDAG  256 (260)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCHHHHHHHHHHHhCchhccCCCcEEEECCc
Confidence            999999999999997643   2446888654

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.95  E-value=2.6e-26  Score=190.30  Aligned_cols=207  Identities=15%  Similarity=0.137  Sum_probs=159.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |++|||||+|+||+++++.|+++|++|++++|+......           .++.++++|+.|++++.++++       ++
T Consensus        29 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-----------~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   97 (260)
T 3un1_A           29 KVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD-----------PDIHTVAGDISKPETADRIVREGIERFGRI   97 (260)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS-----------TTEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc-----------CceEEEEccCCCHHHHHHHHHHHHHHCCCC
Confidence            679999999999999999999999999999998754321           268899999999998888776       78


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |++|||||......    ..+.+...+++|+.++.++++++    ++. +.+++|++||..++.....            
T Consensus        98 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~~~~~------------  164 (260)
T 3un1_A           98 DSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQ-GSGHIVSITTSLVDQPMVG------------  164 (260)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCTTTTSCBTT------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEEechhhccCCCC------------
Confidence            99999999875432    45567788999999999999987    344 6679999999765332111            


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                       .+.      ..|+.||.+.+.+.+.++.++   |+++++++|+.++++....   .   .........+      ...+
T Consensus       165 -~~~------~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~---~---~~~~~~~~~p------~~r~  225 (260)
T 3un1_A          165 -MPS------ALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA---E---THSTLAGLHP------VGRM  225 (260)
T ss_dssp             -CCC------HHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG---G---GHHHHHTTST------TSSC
T ss_pred             -Ccc------HHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH---H---HHHHHhccCC------CCCC
Confidence             111      679999999999999999887   8999999999999986432   1   1112222222      4568


Q ss_pred             eeHHHHHHHHHHhhccccc-CceEEEecC
Q 039049          224 VHIDDVVGAHILAMEETRA-SGRLICSSS  251 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~~-~~~~~~~~~  251 (305)
                      .+++|+|++++++.+.... +..++++|.
T Consensus       226 ~~~~dva~av~~L~~~~~itG~~i~vdGG  254 (260)
T 3un1_A          226 GEIRDVVDAVLYLEHAGFITGEILHVDGG  254 (260)
T ss_dssp             BCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHhcccCCCCCcEEEECCC
Confidence            8999999999999554443 456888643

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.95  E-value=1.3e-26  Score=189.54  Aligned_cols=199  Identities=17%  Similarity=0.199  Sum_probs=139.0

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcC-CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKG-HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFH   79 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~   79 (305)
                      ||+||||||+|+||+++++.|+++| ++|++++|++++....        ...+++++++|+.|++++.++++++|+|||
T Consensus        23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~--------~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~   94 (236)
T 3qvo_A           23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP--------YPTNSQIIMGDVLNHAALKQAMQGQDIVYA   94 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS--------CCTTEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc--------ccCCcEEEEecCCCHHHHHHHhcCCCEEEE
Confidence            5789999999999999999999999 8999999987643321        123789999999999999999999999999


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhH
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWY  159 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y  159 (305)
                      +|+...      .        ...+.++++++++. ++++||++||..+|+..+..  ..+..+..+..+.      ..|
T Consensus        95 ~a~~~~------~--------~~~~~~~~~~~~~~-~~~~iV~iSS~~~~~~~~~~--~~~~~~~~~~~~~------~~~  151 (236)
T 3qvo_A           95 NLTGED------L--------DIQANSVIAAMKAC-DVKRLIFVLSLGIYDEVPGK--FVEWNNAVIGEPL------KPF  151 (236)
T ss_dssp             ECCSTT------H--------HHHHHHHHHHHHHT-TCCEEEEECCCCC------------------CGGG------HHH
T ss_pred             cCCCCc------h--------hHHHHHHHHHHHHc-CCCEEEEEecceecCCCCcc--cccchhhcccchH------HHH
Confidence            998622      0        12467899999998 88999999999987764321  1123333332222      445


Q ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhcc
Q 039049          160 AYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEE  239 (305)
Q Consensus       160 ~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  239 (305)
                      ..    +|..+    +..+++++++||+.++++...... .       ...+.     .....+++++|+|++++.+++.
T Consensus       152 ~~----~~~~l----~~~gi~~~~vrPg~i~~~~~~~~~-~-------~~~~~-----~~~~~~i~~~DvA~~i~~ll~~  210 (236)
T 3qvo_A          152 RR----AADAI----EASGLEYTILRPAWLTDEDIIDYE-L-------TSRNE-----PFKGTIVSRKSVAALITDIIDK  210 (236)
T ss_dssp             HH----HHHHH----HTSCSEEEEEEECEEECCSCCCCE-E-------ECTTS-----CCSCSEEEHHHHHHHHHHHHHS
T ss_pred             HH----HHHHH----HHCCCCEEEEeCCcccCCCCcceE-E-------eccCC-----CCCCcEECHHHHHHHHHHHHcC
Confidence            44    34444    467999999999999987532210 0       00000     0134689999999999999998


Q ss_pred             cc--cCceEEEecC
Q 039049          240 TR--ASGRLICSSS  251 (305)
Q Consensus       240 ~~--~~~~~~~~~~  251 (305)
                      +.  .++.|++++.
T Consensus       211 ~~~~~g~~~~i~~~  224 (236)
T 3qvo_A          211 PEKHIGENIGINQP  224 (236)
T ss_dssp             TTTTTTEEEEEECS
T ss_pred             cccccCeeEEecCC
Confidence            76  4567888653

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.95  E-value=7.6e-28  Score=193.01  Aligned_cols=195  Identities=18%  Similarity=0.155  Sum_probs=152.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc---CCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ---GVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~Vi   78 (305)
                      |+|+||||+|+||++++++|+++  +|++++|++.+....   .....   . +++++|+.|++++.++++   ++|+||
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~---~~~~~---~-~~~~~D~~~~~~~~~~~~~~~~id~vi   71 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAEL---AREVG---A-RALPADLADELEAKALLEEAGPLDLLV   71 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHH---HHHHT---C-EECCCCTTSHHHHHHHHHHHCSEEEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHH---HHhcc---C-cEEEeeCCCHHHHHHHHHhcCCCCEEE
Confidence            67999999999999999999988  999999976433221   11111   2 788899999999999988   899999


Q ss_pred             EeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccc
Q 039049           79 HTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKH  154 (305)
Q Consensus        79 ~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  154 (305)
                      |+||......    ..+.+...+++|+.++.++++++++. +.++||++||..++.+...               .    
T Consensus        72 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~sS~~~~~~~~~---------------~----  131 (207)
T 2yut_A           72 HAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQ-KGARAVFFGAYPRYVQVPG---------------F----  131 (207)
T ss_dssp             ECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEE-EEEEEEEECCCHHHHSSTT---------------B----
T ss_pred             ECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhc-CCcEEEEEcChhhccCCCC---------------c----
Confidence            9999765422    35567779999999999999999766 7789999999876543211               1    


Q ss_pred             cchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHH
Q 039049          155 YNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVG  231 (305)
Q Consensus       155 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  231 (305)
                        ..|+.+|...|.+++.++.+   .+++++++||+.++++....             .+      ...+.+++++|+|+
T Consensus       132 --~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~-------------~~------~~~~~~~~~~dva~  190 (207)
T 2yut_A          132 --AAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWAP-------------LG------GPPKGALSPEEAAR  190 (207)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGGG-------------GT------SCCTTCBCHHHHHH
T ss_pred             --chHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCccc-------------cC------CCCCCCCCHHHHHH
Confidence              67999999999999988877   58999999999999875110             11      12478999999999


Q ss_pred             HHHHhhcccccCceE
Q 039049          232 AHILAMEETRASGRL  246 (305)
Q Consensus       232 ~~~~~~~~~~~~~~~  246 (305)
                      +++.+++++..+..+
T Consensus       191 ~~~~~~~~~~~~~~~  205 (207)
T 2yut_A          191 KVLEGLFREPVPALL  205 (207)
T ss_dssp             HHHHHHC--CCCSCC
T ss_pred             HHHHHHhCCCCcccc
Confidence            999999987665443

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.95  E-value=8.5e-27  Score=193.26  Aligned_cols=219  Identities=15%  Similarity=0.140  Sum_probs=160.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeC-CCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRD-PEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |+|+||||+|+||+++++.|+++|++|++++|+ +........  .......++.++.+|+.|++++.++++       +
T Consensus         8 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (258)
T 3afn_B            8 KRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIA--SMRADGGDAAFFAADLATSEACQQLVDEFVAKFGG   85 (258)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHH--HHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHH--HHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            679999999999999999999999999999998 544332211  111113478899999999999888876       7


Q ss_pred             CCEEEEeccc-cccC----CCCchhhhhhhhhHHHHHHHHHHHHhc---CC--c---cEEEEeccceeee-ccCCCCCCc
Q 039049           74 VDGVFHTASP-VLVP----YDNNIQATLIDPCIKGTLNVLSSCKKA---KS--V---KRVVLTSSCSSIR-YRHDAQQVS  139 (305)
Q Consensus        74 ~d~Vi~~a~~-~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~--~---~~~v~~SS~~~~~-~~~~~~~~~  139 (305)
                      +|+|||+||. ....    ...+.+...+++|+.++.++++++...   .+  .   ++||++||...+. +.+      
T Consensus        86 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------  159 (258)
T 3afn_B           86 IDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGP------  159 (258)
T ss_dssp             CSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCT------
T ss_pred             CCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCC------
Confidence            9999999997 3321    133456778899999999999876432   02  2   6899999976543 111      


Q ss_pred             ccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCC
Q 039049          140 PLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEY  216 (305)
Q Consensus       140 ~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  216 (305)
                               +.      ..|+.+|.+.|.+.+.++.+.   +++++++||+.++++.....   ...+......+.+   
T Consensus       160 ---------~~------~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~---  218 (258)
T 3afn_B          160 ---------GA------GLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK---TQDVRDRISNGIP---  218 (258)
T ss_dssp             ---------TC------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC---CHHHHHHHHTTCT---
T ss_pred             ---------Cc------hHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc---CHHHHHHHhccCC---
Confidence                     11      679999999999999887765   89999999999999864332   1222333333322   


Q ss_pred             CCCCccceeHHHHHHHHHHhhcccc----cCceEEEecCC
Q 039049          217 PNTTVGFVHIDDVVGAHILAMEETR----ASGRLICSSSV  252 (305)
Q Consensus       217 ~~~~~~~i~v~D~a~~~~~~~~~~~----~~~~~~~~~~~  252 (305)
                         ...+++++|+|++++.+++.+.    .+..|+++++.
T Consensus       219 ---~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg~  255 (258)
T 3afn_B          219 ---MGRFGTAEEMAPAFLFFASHLASGYITGQVLDINGGQ  255 (258)
T ss_dssp             ---TCSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred             ---CCcCCCHHHHHHHHHHHhCcchhccccCCEEeECCCc
Confidence               4568999999999999998643    25568887653

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.95  E-value=2.2e-26  Score=189.87  Aligned_cols=220  Identities=15%  Similarity=0.121  Sum_probs=160.7

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhc-cCccCceEEEEccCCCcchHHHHhc-------
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWEL-NGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      +|+++||||+|+||+++++.|+++|++|++++|+.++......  .. .....++.++++|+.|++++.++++       
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETAR--THWHAYADKVLRVRADVADEGDVNAAIAATMEQFG   79 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            3679999999999999999999999999999998653322111  11 1123478999999999998888776       


Q ss_pred             CCCEEEEeccccccCC-------CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCccc
Q 039049           73 GVDGVFHTASPVLVPY-------DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPL  141 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~  141 (305)
                      ++|+|||+||......       ..+.+...+++|+.++.++++.+.    +. +.++||++||...+.+.+.       
T Consensus        80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~-------  151 (250)
T 2cfc_A           80 AIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQ-GAGVIVNIASVASLVAFPG-------  151 (250)
T ss_dssp             CCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCTT-------
T ss_pred             CCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCEEEEECChhhccCCCC-------
Confidence            7899999999765321       345567789999999987776653    34 6689999999876543211       


Q ss_pred             CCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCC
Q 039049          142 NESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPN  218 (305)
Q Consensus       142 ~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (305)
                              .      ..|+.+|.+.|.+.+.++.+.   +++++++||+.++++....... ...+........+     
T Consensus       152 --------~------~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~-----  211 (250)
T 2cfc_A          152 --------R------SAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLD-QPELRDQVLARIP-----  211 (250)
T ss_dssp             --------C------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHT-SHHHHHHHHTTCT-----
T ss_pred             --------c------hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccC-CHHHHHHHHhcCC-----
Confidence                    1      679999999999999988775   8999999999999986432000 1112222222222     


Q ss_pred             CCccceeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          219 TTVGFVHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       219 ~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                       ...+.+++|+|++++.+++.+..   +..+++.+.
T Consensus       212 -~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  246 (250)
T 2cfc_A          212 -QKEIGTAAQVADAVMFLAGEDATYVNGAALVMDGA  246 (250)
T ss_dssp             -TCSCBCHHHHHHHHHHHHSTTCTTCCSCEEEESTT
T ss_pred             -CCCCcCHHHHHHHHHHHcCchhhcccCCEEEECCc
Confidence             34588999999999999986532   445777654

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.95  E-value=9.4e-27  Score=191.53  Aligned_cols=218  Identities=17%  Similarity=0.180  Sum_probs=157.1

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEE-EeCCCcccchhhhhhccCccCceEE-EEccCCCcchHHHHhc------
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTT-VRDPEDLSKVGFLWELNGAEERLKI-MKADLLMEGSFDEAIQ------   72 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~-~~~D~~d~~~~~~~~~------   72 (305)
                      ||+|+||||+|+||++++++|+++|++|+++ .|+.++......  .......++.. +.+|+.|.+++.++++      
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAE--EARRRGSPLVAVLGANLLEAEAATALVHQAAEVL   78 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHH--HHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH--HHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhc
Confidence            7899999999999999999999999999998 776543322111  11111235666 8999999988887754      


Q ss_pred             -CCCEEEEeccccccC----CCCchhhhhhhhhHHHHHHHHHH----HHhcCCccEEEEeccceeeeccCCCCCCcccCC
Q 039049           73 -GVDGVFHTASPVLVP----YDNNIQATLIDPCIKGTLNVLSS----CKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNE  143 (305)
Q Consensus        73 -~~d~Vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E  143 (305)
                       ++|+|||+||.....    ...+.+...+++|+.++.++.+.    +++. +.++||++||...+.+.+.         
T Consensus        79 ~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~~---------  148 (245)
T 2ph3_A           79 GGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKA-RFGRIVNITSVVGILGNPG---------  148 (245)
T ss_dssp             TCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCTHHHHCCSS---------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc-CCCEEEEEeChhhccCCCC---------
Confidence             789999999976532    13456677899999996665554    4455 6789999999865543211         


Q ss_pred             CCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCC
Q 039049          144 SHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTT  220 (305)
Q Consensus       144 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (305)
                            .      ..|+.+|.+.+.+.+.++.+.   +++++++||+.++++..... .  ...........+      .
T Consensus       149 ------~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~--~~~~~~~~~~~~------~  207 (245)
T 2ph3_A          149 ------Q------ANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERL-P--QEVKEAYLKQIP------A  207 (245)
T ss_dssp             ------B------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS-C--HHHHHHHHHTCT------T
T ss_pred             ------C------cchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhc-C--HHHHHHHHhcCC------C
Confidence                  1      679999999999999888775   89999999999998753221 1  112222222222      3


Q ss_pred             ccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          221 VGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       221 ~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      ..+++++|+|++++.++..+.   .+..|+++++
T Consensus       208 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  241 (245)
T 2ph3_A          208 GRFGRPEEVAEAVAFLVSEKAGYITGQTLCVDGG  241 (245)
T ss_dssp             CSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CCCcCHHHHHHHHHHHhCcccccccCCEEEECCC
Confidence            568999999999999997643   2556888654

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.95  E-value=1.1e-26  Score=192.59  Aligned_cols=220  Identities=18%  Similarity=0.150  Sum_probs=160.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |++|||||+|+||+++++.|+++|++|++++|+.+.......  ..   ..++.++++|+.|++++.++++       ++
T Consensus         9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   83 (259)
T 4e6p_A            9 KSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAA--EI---GPAAYAVQMDVTRQDSIDAAIAATVEHAGGL   83 (259)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HH---CTTEEEEECCTTCHHHHHHHHHHHHHHSSSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--Hh---CCCceEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            579999999999999999999999999999997654332211  11   2367899999999998888776       78


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA----KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |+||||||......    ..+.+...+++|+.++.++++++...    +...+||++||...+.+.+..           
T Consensus        84 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----------  152 (259)
T 4e6p_A           84 DILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALV-----------  152 (259)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTB-----------
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCC-----------
Confidence            99999999865432    45567788999999999999987543    114589999998765432211           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCC----C--C
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGE----Y--P  217 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~----~--~  217 (305)
                                ..|+.||...+.+.+.++.++   ++++++++|+.++++....    ....+..........    +  .
T Consensus       153 ----------~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~----~~~~~~~~~~~~~~~~~~~~~~~  218 (259)
T 4e6p_A          153 ----------AIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDG----VDALFARYENRPRGEKKRLVGEA  218 (259)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHH----HHHHHHHHHTCCTTHHHHHHHHH
T ss_pred             ----------hHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhh----hhhhhhhhccCChHHHHHHHhcc
Confidence                      679999999999999998775   8999999999999885321    000111110000000    0  0


Q ss_pred             CCCccceeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          218 NTTVGFVHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       218 ~~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      ...+.+.+++|+|+++++++.....   +..++++|.
T Consensus       219 ~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdgG  255 (259)
T 4e6p_A          219 VPFGRMGTAEDLTGMAIFLASAESDYIVSQTYNVDGG  255 (259)
T ss_dssp             STTSSCBCTHHHHHHHHHTTSGGGTTCCSCEEEESTT
T ss_pred             CCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECcC
Confidence            1156799999999999999875443   557888643

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.95  E-value=4.3e-27  Score=197.45  Aligned_cols=239  Identities=17%  Similarity=0.172  Sum_probs=174.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchh-hhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVG-FLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.+...... .+........++.++++|+.|++++.++++       +
T Consensus        12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   91 (281)
T 3svt_A           12 RTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWHGR   91 (281)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            67999999999999999999999999999999875433321 122111112378899999999998888775       6


Q ss_pred             CCEEEEecccccc-----CCCCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLV-----PYDNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|++|||||....     ....+.+...+++|+.++.++++++...   .+..+||++||...+.+.+..          
T Consensus        92 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------  161 (281)
T 3svt_A           92 LHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWF----------  161 (281)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTC----------
T ss_pred             CCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCC----------
Confidence            7999999997332     1245567789999999999999987543   134599999998865443211          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                                 ..|+.||...+.+.+.++.++   ++++.+++|+.++++....... ............+      ...
T Consensus       162 -----------~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~p------~~r  223 (281)
T 3svt_A          162 -----------GAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITE-SAELSSDYAMCTP------LPR  223 (281)
T ss_dssp             -----------THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHT-CHHHHHHHHHHCS------SSS
T ss_pred             -----------hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhccc-CHHHHHHHHhcCC------CCC
Confidence                       669999999999999988775   5999999999999875321100 0112222222222      456


Q ss_pred             ceeHHHHHHHHHHhhccccc---CceEEEe-cCCcC-HHHHHHHHHHhCCC
Q 039049          223 FVHIDDVVGAHILAMEETRA---SGRLICS-SSVAH-WSPIIEMLKATYPS  268 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~~---~~~~~~~-~~~~s-~~el~~~i~~~~~~  268 (305)
                      +.+++|+|+++++++.....   +..+++. |..++ ..++++.+.+.++.
T Consensus       224 ~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~  274 (281)
T 3svt_A          224 QGEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGR  274 (281)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCT
T ss_pred             CCCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCC
Confidence            78999999999999986543   5568885 44555 77888888887764

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.95  E-value=1.5e-25  Score=187.05  Aligned_cols=215  Identities=16%  Similarity=0.080  Sum_probs=164.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.+........  .   ..++.++++|+.|.+++.++++       ++
T Consensus        12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~--~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   86 (271)
T 3tzq_B           12 KVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAAS--V---GRGAVHHVVDLTNEVSVRALIDFTIDTFGRL   86 (271)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHH--H---CTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH--h---CCCeEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            6799999999999999999999999999999987654432211  1   3478899999999998888776       78


Q ss_pred             CEEEEecccccc------CCCCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCC
Q 039049           75 DGVFHTASPVLV------PYDNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNES  144 (305)
Q Consensus        75 d~Vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~  144 (305)
                      |++|||||....      ....+.+...+++|+.++.++++++    ++. +..+||++||...+.+....         
T Consensus        87 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~~~~~~---------  156 (271)
T 3tzq_B           87 DIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISA-GGGAIVNISSATAHAAYDMS---------  156 (271)
T ss_dssp             CEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEEEEECCGGGTSBCSSC---------
T ss_pred             CEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEECCHHHcCCCCCC---------
Confidence            999999998743      1145567789999999999999998    555 66799999998765442211         


Q ss_pred             CCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCc
Q 039049          145 HWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTV  221 (305)
Q Consensus       145 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (305)
                                  ..|+.||.+.+.+.+.++.+   +|+++++++|+.++++.......  ...........+      ..
T Consensus       157 ------------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~------~~  216 (271)
T 3tzq_B          157 ------------TAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLP--QPIVDIFATHHL------AG  216 (271)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---C--HHHHHHHHTTST------TS
T ss_pred             ------------hHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCC--HHHHHHHHhcCC------CC
Confidence                        67999999999999999887   68999999999999986542221  122222222222      34


Q ss_pred             cceeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          222 GFVHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      .+..++|+|+++++++.....   +..+++.|.
T Consensus       217 r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  249 (271)
T 3tzq_B          217 RIGEPHEIAELVCFLASDRAAFITGQVIAADSG  249 (271)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCcCHHHHHHHHHHHhCcccCCcCCCEEEECCC
Confidence            578999999999999986543   456888654

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.95  E-value=4.3e-26  Score=187.66  Aligned_cols=217  Identities=15%  Similarity=0.143  Sum_probs=163.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCc-ccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPED-LSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |+++||||+|+||+++++.|+++|++|+++.|+... ......  .......++.++++|+.|.+++.++++       +
T Consensus         5 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   82 (246)
T 3osu_A            5 KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVE--EIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS   82 (246)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHH--HHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH--HHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            679999999999999999999999999998886432 221111  111224478899999999998888775       7


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|++|||||......    ..+.+...+++|+.++.++++++    ++. +..+||++||...+.+.+..          
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~----------  151 (246)
T 3osu_A           83 LDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQ-RSGAIINLSSVVGAVGNPGQ----------  151 (246)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHHCCTTC----------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEEcchhhcCCCCCC----------
Confidence            899999999875432    45567779999999999999998    445 56799999998765543211          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                                 ..|+.||...+.+.+.++.+   .++++.+++|+.+.++.....   ..........+.+      ...
T Consensus       152 -----------~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~p------~~r  211 (246)
T 3osu_A          152 -----------ANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL---SDELKEQMLTQIP------LAR  211 (246)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCS---CHHHHHHHHTTCT------TCS
T ss_pred             -----------hHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCccccc---CHHHHHHHHhcCC------CCC
Confidence                       67999999999999988875   489999999999999865432   1223333333332      456


Q ss_pred             ceeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          223 FVHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      +.+++|+|+++++++..+..   +..++++|.
T Consensus       212 ~~~~~dva~~v~~l~s~~~~~itG~~i~vdgG  243 (246)
T 3osu_A          212 FGQDTDIANTVAFLASDKAKYITGQTIHVNGG  243 (246)
T ss_dssp             CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence            88999999999999986543   556888654

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.95  E-value=3.5e-26  Score=185.19  Aligned_cols=199  Identities=13%  Similarity=0.122  Sum_probs=144.2

Q ss_pred             CCc-EEEeCCcchHHHHHHHHHH-HcCCeEEEEEeCCC-cccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEE
Q 039049            1 MPE-YCVTGGTGFIAAHLVKALL-DKGHMVRTTVRDPE-DLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGV   77 (305)
Q Consensus         1 m~~-ilItG~~G~iG~~l~~~l~-~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~V   77 (305)
                      ||+ |+||||+|+||+++++.|+ +.|++|++++|+++ +.....      ....+++++++|+.|.+++.++++++|+|
T Consensus         4 mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   77 (221)
T 3r6d_A            4 MYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI------IDHERVTVIEGSFQNPGXLEQAVTNAEVV   77 (221)
T ss_dssp             SCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH------HTSTTEEEEECCTTCHHHHHHHHTTCSEE
T ss_pred             eEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc------cCCCceEEEECCCCCHHHHHHHHcCCCEE
Confidence            445 9999999999999999999 89999999999865 332211      01347899999999999999999999999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccch
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNL  157 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  157 (305)
                      ||+|+..               |+. ++++++++++. ++++||++||..++...+.     +..+..      .....+
T Consensus        78 v~~ag~~---------------n~~-~~~~~~~~~~~-~~~~iv~iSs~~~~~~~~~-----~~~~~~------~~~~~~  129 (221)
T 3r6d_A           78 FVGAMES---------------GSD-MASIVKALSRX-NIRRVIGVSMAGLSGEFPV-----ALEKWT------FDNLPI  129 (221)
T ss_dssp             EESCCCC---------------HHH-HHHHHHHHHHT-TCCEEEEEEETTTTSCSCH-----HHHHHH------HHTSCH
T ss_pred             EEcCCCC---------------Chh-HHHHHHHHHhc-CCCeEEEEeeceecCCCCc-----cccccc------cccccc
Confidence            9999863               344 88999999988 8899999999887654211     000000      000002


Q ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhh
Q 039049          158 WYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAM  237 (305)
Q Consensus       158 ~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~  237 (305)
                      .|+.+|..+|.+++    ..+++++++||+.++++.........        ....    .....+++.+|+|++++.++
T Consensus       130 ~y~~~K~~~e~~~~----~~~i~~~~vrpg~v~~~~~~~~~~~~--------~~~~----~~~~~~~~~~dvA~~~~~l~  193 (221)
T 3r6d_A          130 SYVQGERQARNVLR----ESNLNYTILRLTWLYNDPEXTDYELI--------PEGA----QFNDAQVSREAVVKAIFDIL  193 (221)
T ss_dssp             HHHHHHHHHHHHHH----HSCSEEEEEEECEEECCTTCCCCEEE--------CTTS----CCCCCEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH----hCCCCEEEEechhhcCCCCCcceeec--------cCCc----cCCCceeeHHHHHHHHHHHH
Confidence            79999999999874    47999999999999997322111000        0000    01234899999999999999


Q ss_pred             --ccccc--CceEEEe
Q 039049          238 --EETRA--SGRLICS  249 (305)
Q Consensus       238 --~~~~~--~~~~~~~  249 (305)
                        +.+..  +..+.+.
T Consensus       194 ~~~~~~~~~~~~~~i~  209 (221)
T 3r6d_A          194 HAADETPFHRTSIGVG  209 (221)
T ss_dssp             TCSCCGGGTTEEEEEE
T ss_pred             HhcChhhhhcceeeec
Confidence              76653  3445554

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.95  E-value=1.8e-26  Score=192.19  Aligned_cols=218  Identities=13%  Similarity=0.114  Sum_probs=145.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHh--------cC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAI--------QG   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~--------~~   73 (305)
                      |+|+||||+|+||+++++.|+++|++|++++|+........  ........++.++.+|+.|.+++.+++        .+
T Consensus        15 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   92 (266)
T 1xq1_A           15 KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECL--SKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   92 (266)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--HHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            67999999999999999999999999999999865332211  111111346889999999998888776        46


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|+|||+||......    ..+.+...+++|+.++.++++++    ++. +.++||++||..++.+.+..          
T Consensus        93 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~~----------  161 (266)
T 1xq1_A           93 LDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKAS-GCGNIIFMSSIAGVVSASVG----------  161 (266)
T ss_dssp             CSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SSCEEEEEC----------C----------
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEccchhccCCCCC----------
Confidence            899999999765321    34566778999999999999988    445 67899999998765432111          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                                 ..|+.+|...|.+.+.++.+.   +++++++||+.++++......  ...+........+      ...
T Consensus       162 -----------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~~------~~~  222 (266)
T 1xq1_A          162 -----------SIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY--DDEFKKVVISRKP------LGR  222 (266)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------------------
T ss_pred             -----------chHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhc--CHHHHHHHHhcCC------CCC
Confidence                       669999999999999988774   899999999999998643211  0001111111111      345


Q ss_pred             ceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          223 FVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      +++++|+|+++..++..+.   .+..+++.+.
T Consensus       223 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  254 (266)
T 1xq1_A          223 FGEPEEVSSLVAFLCMPAASYITGQTICVDGG  254 (266)
T ss_dssp             -CCGGGGHHHHHHHTSGGGTTCCSCEEECCCC
T ss_pred             CcCHHHHHHHHHHHcCccccCccCcEEEEcCC
Confidence            8899999999999997543   2446777543

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.95  E-value=1.2e-26  Score=185.31  Aligned_cols=188  Identities=15%  Similarity=0.067  Sum_probs=147.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcC---CCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQG---VDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~---~d~Vi   78 (305)
                      |+|+||||+|+||++++++|+ +|++|++++|+..                   .+.+|+.|++++.+++++   +|+||
T Consensus         4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-------------------~~~~D~~~~~~~~~~~~~~~~~d~vi   63 (202)
T 3d7l_A            4 MKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-------------------DVTVDITNIDSIKKMYEQVGKVDAIV   63 (202)
T ss_dssp             CEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-------------------SEECCTTCHHHHHHHHHHHCCEEEEE
T ss_pred             cEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-------------------ceeeecCCHHHHHHHHHHhCCCCEEE
Confidence            579999999999999999999 9999999999753                   357999999999888874   89999


Q ss_pred             EeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCCCcccCCCCCCCccccc
Q 039049           79 HTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKAK-SVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCK  153 (305)
Q Consensus        79 ~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~  153 (305)
                      |+||......    ..+.+...+++|+.++.++++++...- ..++||++||..++.+.+.               .   
T Consensus        64 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~---------------~---  125 (202)
T 3d7l_A           64 SATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDPIVQ---------------G---  125 (202)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSCCTT---------------C---
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCCCCc---------------c---
Confidence            9999764332    234556778999999999999987651 1268999999765332111               1   


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHH
Q 039049          154 HYNLWYAYAKTIAEKEAWRIAKDC--GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVG  231 (305)
Q Consensus       154 ~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  231 (305)
                         ..|+.+|...|.+++.++.+.  +++++++||+.++++..            ....+.      ..+++++++|+|+
T Consensus       126 ---~~Y~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~------------~~~~~~------~~~~~~~~~dva~  184 (202)
T 3d7l_A          126 ---ASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWD------------KLEPFF------EGFLPVPAAKVAR  184 (202)
T ss_dssp             ---HHHHHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHH------------HHGGGS------TTCCCBCHHHHHH
T ss_pred             ---HHHHHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCchh------------hhhhhc------cccCCCCHHHHHH
Confidence               679999999999999887664  89999999999998742            011111      1567899999999


Q ss_pred             HHHHhhcccccCceEEE
Q 039049          232 AHILAMEETRASGRLIC  248 (305)
Q Consensus       232 ~~~~~~~~~~~~~~~~~  248 (305)
                      +++.+++....+..||+
T Consensus       185 ~~~~~~~~~~~G~~~~v  201 (202)
T 3d7l_A          185 AFEKSVFGAQTGESYQV  201 (202)
T ss_dssp             HHHHHHHSCCCSCEEEE
T ss_pred             HHHHhhhccccCceEec
Confidence            99998865545556775

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.94  E-value=1.9e-26  Score=191.64  Aligned_cols=220  Identities=11%  Similarity=0.112  Sum_probs=159.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchh-hhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVG-FLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.++..... .+....  ..++.++++|+.|.+++.++++       +
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (263)
T 3ai3_A            8 KVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKF--GVRVLEVAVDVATPEGVDAVVESVRSSFGG   85 (263)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--CCCEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            67999999999999999999999999999999865332211 111110  2368899999999998888775       7


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|+||||||......    ..+.+...+++|+.++.++++++.    +. +.++||++||...+.+.+.           
T Consensus        86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~-----------  153 (263)
T 3ai3_A           86 ADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRAR-GGGAIIHNASICAVQPLWY-----------  153 (263)
T ss_dssp             CSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCTT-----------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECchhhcCCCCC-----------
Confidence            899999999765321    345667789999999999998874    34 5689999999876543211           


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCC--------chHHHHHHHHhc-CC
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPT--------STLLLILAMVKG-LR  213 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~--------~~~~~~~~~~~~-~~  213 (305)
                          .      ..|+.||...+.+.+.++.+   ++++++++||+.++++.......        ............ .+
T Consensus       154 ----~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  223 (263)
T 3ai3_A          154 ----E------PIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAP  223 (263)
T ss_dssp             ----C------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCT
T ss_pred             ----c------chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCC
Confidence                1      66999999999999998876   58999999999999975211000        001111112111 11


Q ss_pred             CCCCCCCccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          214 GEYPNTTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       214 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                            ...+++++|+|+++++++..+.   .+..|++.+.
T Consensus       224 ------~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG  258 (263)
T 3ai3_A          224 ------IKRFASPEELANFFVFLCSERATYSVGSAYFVDGG  258 (263)
T ss_dssp             ------TCSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTT
T ss_pred             ------CCCCcCHHHHHHHHHHHcCccccCCCCcEEEECCC
Confidence                  3568999999999999997643   2456888643

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.94  E-value=4.7e-26  Score=187.27  Aligned_cols=216  Identities=18%  Similarity=0.149  Sum_probs=158.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc---CCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ---GVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~Vi   78 (305)
                      ++|+||||+|+||+++++.|+++|++|++++|+.++....   ...   ..+++++++|+.|.+++.++++   ++|+||
T Consensus         8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~---~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi   81 (244)
T 3d3w_A            8 RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSL---VRE---CPGIEPVCVDLGDWEATERALGSVGPVDLLV   81 (244)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHH---STTCEEEECCTTCHHHHHHHHTTCCCCCEEE
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHH---cCCCCEEEEeCCCHHHHHHHHHHcCCCCEEE
Confidence            5799999999999999999999999999999976432221   111   1256778999999999999886   579999


Q ss_pred             EeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CC-ccEEEEeccceeeeccCCCCCCcccCCCCCCCcc
Q 039049           79 HTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KS-VKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPD  150 (305)
Q Consensus        79 ~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~-~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~  150 (305)
                      |+||......    ..+.+...+++|+.++.++++++...   .+ .++||++||...+.+.+               +.
T Consensus        82 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------------~~  146 (244)
T 3d3w_A           82 NNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVT---------------NH  146 (244)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT---------------TB
T ss_pred             ECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCC---------------CC
Confidence            9999765321    34566779999999999998887542   13 57999999987543211               11


Q ss_pred             cccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHH
Q 039049          151 YCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHID  227 (305)
Q Consensus       151 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  227 (305)
                            ..|+.||.+.|.+++.++.+   .+++++++||+.++++........ .........+.+      ...+++++
T Consensus       147 ------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~  213 (244)
T 3d3w_A          147 ------SVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSD-PHKAKTMLNRIP------LGKFAEVE  213 (244)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCS-TTHHHHHHHTCT------TCSCBCHH
T ss_pred             ------chHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccC-hHHHHHHHhhCC------CCCCcCHH
Confidence                  67999999999999998876   489999999999998753211000 011122222222      45789999


Q ss_pred             HHHHHHHHhhcccc---cCceEEEecC
Q 039049          228 DVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       228 D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      |+|++++.+++...   .+..|++++.
T Consensus       214 dva~~~~~l~~~~~~~~~G~~~~v~gG  240 (244)
T 3d3w_A          214 HVVNAILFLLSDRSGMTTGSTLPVEGG  240 (244)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHcCccccCCCCCEEEECCC
Confidence            99999999998643   3456888653

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.94  E-value=5.8e-26  Score=186.45  Aligned_cols=208  Identities=19%  Similarity=0.116  Sum_probs=157.4

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc------CC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ------GV   74 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------~~   74 (305)
                      +|+|+||||+|+||+++++.|+++|++|++++|+.. .             .++.++++|+.|.+++.++++      ++
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   67 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-------------EDLIYVEGDVTREEDVRRAVARAQEEAPL   67 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-------------SSSEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-------------cceEEEeCCCCCHHHHHHHHHHHHhhCCc
Confidence            368999999999999999999999999999999865 1             145789999999999988886      78


Q ss_pred             CEEEEeccccccCCC----Cc----hhhhhhhhhHHHHHHHHHHHHhcC---C------ccEEEEeccceeeeccCCCCC
Q 039049           75 DGVFHTASPVLVPYD----NN----IQATLIDPCIKGTLNVLSSCKKAK---S------VKRVVLTSSCSSIRYRHDAQQ  137 (305)
Q Consensus        75 d~Vi~~a~~~~~~~~----~~----~~~~~~~~n~~~~~~l~~~~~~~~---~------~~~~v~~SS~~~~~~~~~~~~  137 (305)
                      |+|||+||.......    .+    .+...+++|+.++.++++++....   +      .++||++||..++.+...   
T Consensus        68 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---  144 (242)
T 1uay_A           68 FAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIG---  144 (242)
T ss_dssp             EEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTT---
T ss_pred             eEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCC---
Confidence            999999998654321    12    667789999999999999886531   1      239999999876554211   


Q ss_pred             CcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCC
Q 039049          138 VSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRG  214 (305)
Q Consensus       138 ~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  214 (305)
                                  .      ..|+.+|...+.+.+.++.+.   +++++++||+.++++.....   ...+........+.
T Consensus       145 ------------~------~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~~  203 (242)
T 1uay_A          145 ------------Q------AAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL---PEKAKASLAAQVPF  203 (242)
T ss_dssp             ------------C------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS---CHHHHHHHHTTCCS
T ss_pred             ------------C------chhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhcc---chhHHHHHHhhCCC
Confidence                        1      679999999999998887764   89999999999999853321   11122222222221


Q ss_pred             CCCCCCccceeHHHHHHHHHHhhccccc-CceEEEecC
Q 039049          215 EYPNTTVGFVHIDDVVGAHILAMEETRA-SGRLICSSS  251 (305)
Q Consensus       215 ~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~~~~~~  251 (305)
                           ...+++++|+|++++.+++.... +..+++.+.
T Consensus       204 -----~~~~~~~~dva~~~~~l~~~~~~~G~~~~v~gG  236 (242)
T 1uay_A          204 -----PPRLGRPEEYAALVLHILENPMLNGEVVRLDGA  236 (242)
T ss_dssp             -----SCSCCCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             -----cccCCCHHHHHHHHHHHhcCCCCCCcEEEEcCC
Confidence                 14588999999999999987443 446888643

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.94  E-value=8.4e-26  Score=187.07  Aligned_cols=221  Identities=13%  Similarity=0.106  Sum_probs=160.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.+.......  .......++.++++|+.|.+++.++++       ++
T Consensus         7 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   84 (257)
T 3imf_A            7 KVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKL--EIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRI   84 (257)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--HHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            679999999999999999999999999999998764433221  122234578999999999998888775       68


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKK----AKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |++|||||......    ..+.+...+++|+.++.++.+++..    ..+..+||++||...+.+.+..           
T Consensus        85 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----------  153 (257)
T 3imf_A           85 DILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGV-----------  153 (257)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTC-----------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCc-----------
Confidence            99999999755422    4556778999999999999998732    2245799999998754432211           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHH----cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKD----CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                                ..|+.||...+.+.+.++.+    +|+++++++||.+.++....................+      ...
T Consensus       154 ----------~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p------~~r  217 (257)
T 3imf_A          154 ----------IHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVP------LGR  217 (257)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTST------TCS
T ss_pred             ----------HHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCC------CCC
Confidence                      66999999999998887754    4899999999999988543211100001111111111      345


Q ss_pred             ceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          223 FVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      +.+++|+|+++++++....   .+..+++.|.
T Consensus       218 ~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  249 (257)
T 3imf_A          218 LGTPEEIAGLAYYLCSDEAAYINGTCMTMDGG  249 (257)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHcCchhcCccCCEEEECCC
Confidence            8899999999999997654   3556778643

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.94  E-value=4.5e-26  Score=188.50  Aligned_cols=218  Identities=13%  Similarity=0.108  Sum_probs=157.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCce-EEEEccCCCcchHHHHh------cCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERL-KIMKADLLMEGSFDEAI------QGV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~d~~~~~~~~------~~~   74 (305)
                      ++++||||+|+||+++++.|+++|++|++++|+.++......  ..   ..++ .++++|+.|.+++.+++      .++
T Consensus        12 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~--~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   86 (254)
T 2wsb_A           12 ACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQ--EL---GAAVAARIVADVTDAEAMTAAAAEAEAVAPV   86 (254)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HH---GGGEEEEEECCTTCHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--Hh---cccceeEEEEecCCHHHHHHHHHHHHhhCCC
Confidence            579999999999999999999999999999998653322111  11   2256 88999999999888776      478


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |+|||+||......    ..+.+...+++|+.++.++.+.+    ++. +.++||++||..++.+.+.            
T Consensus        87 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~------------  153 (254)
T 2wsb_A           87 SILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVAR-GAGAIVNLGSMSGTIVNRP------------  153 (254)
T ss_dssp             CEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCSS------------
T ss_pred             cEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEecchhccCCCC------------
Confidence            99999999765432    23455678899999987777765    344 6689999999876443211            


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                       .+.      ..|+.+|.+.|.+.+.++.+.   +++++++||+.++++....... ............+      ...+
T Consensus       154 -~~~------~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~------~~~~  219 (254)
T 2wsb_A          154 -QFA------SSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRE-RPELFETWLDMTP------MGRC  219 (254)
T ss_dssp             -SCB------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHT-CHHHHHHHHHTST------TSSC
T ss_pred             -Ccc------hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhcccc-ChHHHHHHHhcCC------CCCC
Confidence             111      679999999999999888775   8999999999999875321000 0112222322222      3568


Q ss_pred             eeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          224 VHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      ++++|+|++++.++..+.   .+..+++.+.
T Consensus       220 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  250 (254)
T 2wsb_A          220 GEPSEIAAAALFLASPAASYVTGAILAVDGG  250 (254)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCHHHHHHHHHHHhCcccccccCCEEEECCC
Confidence            999999999999987643   2446777654

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.94  E-value=9.9e-26  Score=185.64  Aligned_cols=217  Identities=13%  Similarity=0.090  Sum_probs=148.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEE-EeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTT-VRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |+|+||||+|+||+++++.|+++|++|+++ .|++........  .......++.++++|+.|.+++.++++       +
T Consensus         6 ~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (247)
T 2hq1_A            6 KTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAE--EFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGR   83 (247)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHH--HHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHH--HHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            689999999999999999999999999999 455443222111  111123478899999999998888775       7


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKK----AKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|+||||||......    ..+.+...+++|+.++.++.+++..    . +.++||++||...+++.+.           
T Consensus        84 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~~-----------  151 (247)
T 2hq1_A           84 IDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQ-KSGKIINITSIAGIIGNAG-----------  151 (247)
T ss_dssp             CCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHH-TCEEEEEECC--------------------
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcChhhccCCCC-----------
Confidence            899999999865321    3455677899999999888887653    4 5679999999865443211           


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                          .      ..|+.+|.+.|.+.+.++.+.   ++++++++|+.+.++.....   ..........+.+      ...
T Consensus       152 ----~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~------~~~  212 (247)
T 2hq1_A          152 ----Q------ANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVL---PDKVKEMYLNNIP------LKR  212 (247)
T ss_dssp             ----C------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS---CHHHHHHHHTTST------TSS
T ss_pred             ----C------cHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhc---chHHHHHHHhhCC------CCC
Confidence                1      679999999999999888765   89999999999987642211   1112222222222      356


Q ss_pred             ceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          223 FVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      +++++|+|+++..++..+.   .+..|++++.
T Consensus       213 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  244 (247)
T 2hq1_A          213 FGTPEEVANVVGFLASDDSNYITGQVINIDGG  244 (247)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCHHHHHHHHHHHcCcccccccCcEEEeCCC
Confidence            8999999999999987643   3456888654

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.94  E-value=7e-26  Score=186.67  Aligned_cols=217  Identities=18%  Similarity=0.115  Sum_probs=158.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhh-hhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGF-LWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      ++|+||||+|+||+++++.|+++|++|++++|+.++...... +...  ...++.++.+|+.|.+++.++++       +
T Consensus         8 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (248)
T 2pnf_A            8 KVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANK--YGVKAHGVEMNLLSEESINKAFEEIYNLVDG   85 (248)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH--HCCCEEEEECCTTCHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhh--cCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            579999999999999999999999999999997653322111 1110  12368899999999998888876       7


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|+|||+||......    ..+.+...+++|+.++.++++++    ++. +.++||++||...+.+.+.           
T Consensus        86 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~~-----------  153 (248)
T 2pnf_A           86 IDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQ-RWGRIVNISSVVGFTGNVG-----------  153 (248)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHH-TCEEEEEECCHHHHHCCTT-----------
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCcEEEEEccHHhcCCCCC-----------
Confidence            899999999765321    34566778999999997777655    344 6689999999865543211           


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                          .      ..|+.+|...+.+.+.++.+.   +++++++||+.++++..... .  ...........+      ...
T Consensus       154 ----~------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~-~--~~~~~~~~~~~~------~~~  214 (248)
T 2pnf_A          154 ----Q------VNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVL-S--EEIKQKYKEQIP------LGR  214 (248)
T ss_dssp             ----C------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS-C--HHHHHHHHHTCT------TSS
T ss_pred             ----C------chHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhc-c--HHHHHHHHhcCC------CCC
Confidence                1      669999999999998887664   79999999999998864321 1  111122222211      345


Q ss_pred             ceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          223 FVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      +++++|+|+++..++....   .+..|++++.
T Consensus       215 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  246 (248)
T 2pnf_A          215 FGSPEEVANVVLFLCSELASYITGEVIHVNGG  246 (248)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ccCHHHHHHHHHHHhCchhhcCCCcEEEeCCC
Confidence            8999999999999997642   2556888654

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.94  E-value=7.7e-26  Score=189.17  Aligned_cols=219  Identities=16%  Similarity=0.108  Sum_probs=159.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEe-CCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVR-DPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |+|+||||+|+||++++++|+++|++|++++| +........  ........++.++++|+.|.+++.++++       +
T Consensus        22 k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~--~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   99 (274)
T 1ja9_A           22 KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVV--AELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG   99 (274)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH--HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHH--HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            67999999999999999999999999999999 433222111  1111123478899999999998888876       7


Q ss_pred             CCEEEEeccccccC----CCCchhhhhhhhhHHHHHHHHHHHHhc--CCccEEEEeccceee-eccCCCCCCcccCCCCC
Q 039049           74 VDGVFHTASPVLVP----YDNNIQATLIDPCIKGTLNVLSSCKKA--KSVKRVVLTSSCSSI-RYRHDAQQVSPLNESHW  146 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~-~~~~~~~~~~~~~E~~~  146 (305)
                      +|+|||+||.....    ...+.+...+++|+.++.++++++...  .+ ++||++||..++ .+.+.            
T Consensus       100 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~~~------------  166 (274)
T 1ja9_A          100 LDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTGIPN------------  166 (274)
T ss_dssp             EEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCSCCS------------
T ss_pred             CCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCCCCC------------
Confidence            89999999976532    134456778999999999999988654  13 699999998765 22111            


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCC-----------CCCchHHHHHHHHhcC
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAP-----------QPTSTLLLILAMVKGL  212 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~-----------~~~~~~~~~~~~~~~~  212 (305)
                         .      ..|+.+|.+.|.+++.++.++   +++++++||+.++++....           ... ..........+.
T Consensus       167 ---~------~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  236 (274)
T 1ja9_A          167 ---H------ALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMP-QEKIDEGLANMN  236 (274)
T ss_dssp             ---C------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCC-HHHHHHHHHHTS
T ss_pred             ---C------chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCc-hHHHHHHHHhcC
Confidence               1      679999999999999888775   8999999999998864220           000 011222222222


Q ss_pred             CCCCCCCCccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          213 RGEYPNTTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       213 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      +      .+.+++++|+|++++.++..+.   .+..|+++++
T Consensus       237 ~------~~~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG  272 (274)
T 1ja9_A          237 P------LKRIGYPADIGRAVSALCQEESEWINGQVIKLTGG  272 (274)
T ss_dssp             T------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             C------CCCccCHHHHHHHHHHHhCcccccccCcEEEecCC
Confidence            2      4678999999999999998653   3557888654

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.94  E-value=1.6e-25  Score=187.60  Aligned_cols=226  Identities=14%  Similarity=0.134  Sum_probs=157.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCc-ccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPED-LSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |++|||||+|+||+++++.|+++|++|++++|+... ......... .....++.++++|+.|.+++.++++       +
T Consensus        26 k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  104 (281)
T 3v2h_A           26 KTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVA-GLSSGTVLHHPADMTKPSEIADMMAMVADRFGG  104 (281)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHH-TTCSSCEEEECCCTTCHHHHHHHHHHHHHHTSS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHh-hccCCcEEEEeCCCCCHHHHHHHHHHHHHHCCC
Confidence            679999999999999999999999999999985432 221111110 1113478999999999998888775       7


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|++|||||......    ..+.+...+++|+.++.++++++    ++. +..+||++||...+.+.+..          
T Consensus       105 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~----------  173 (281)
T 3v2h_A          105 ADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKK-GWGRIINIASAHGLVASPFK----------  173 (281)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCTTC----------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEECCcccccCCCCc----------
Confidence            899999999865443    45567788999999999999987    344 55799999998765432211          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcC----CCCCCC
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGL----RGEYPN  218 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~----~~~~~~  218 (305)
                                 ..|+.||.+.+.+.+.++.++   ++++.+++|+.+.++........... ........    ......
T Consensus       174 -----------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  241 (281)
T 3v2h_A          174 -----------SAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQAR-TRGITEEQVINEVMLKGQ  241 (281)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----------------------------CC
T ss_pred             -----------hHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhh-hcCCCHHHHHHHHHHhcC
Confidence                       679999999999999988774   89999999999998864322111000 00000000    000111


Q ss_pred             CCccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          219 TTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       219 ~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      ..+.+++++|+|+++++++....   .+..+++.|.
T Consensus       242 p~~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG  277 (281)
T 3v2h_A          242 PTKKFITVEQVASLALYLAGDDAAQITGTHVSMDGG  277 (281)
T ss_dssp             TTCSCBCHHHHHHHHHHHHSSGGGGCCSCEEEESTT
T ss_pred             CCCCccCHHHHHHHHHHHcCCCcCCCCCcEEEECCC
Confidence            25779999999999999997654   3556788654

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.94  E-value=4.4e-26  Score=189.66  Aligned_cols=223  Identities=16%  Similarity=0.104  Sum_probs=155.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCcc-------CceEEEEccCCCcchHHHHhcC-
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAE-------ERLKIMKADLLMEGSFDEAIQG-   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-------~~~~~~~~D~~d~~~~~~~~~~-   73 (305)
                      ++|+||||+|+||+++++.|+++|++|++++|+.+......  .......       .++.++++|+.|.+++.+++++ 
T Consensus         8 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   85 (264)
T 2pd6_A            8 ALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETV--RLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQV   85 (264)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH--HTC------------CCEEEECCTTSHHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH--HHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHH
Confidence            57999999999999999999999999999999865332211  1111111       4688999999999888887753 


Q ss_pred             ------C-CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CC-ccEEEEeccceeeeccCCCCCC
Q 039049           74 ------V-DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KS-VKRVVLTSSCSSIRYRHDAQQV  138 (305)
Q Consensus        74 ------~-d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~-~~~~v~~SS~~~~~~~~~~~~~  138 (305)
                            + |+||||||......    ..+.+...+++|+.++.++++++...   .+ .++||++||...+.+.+.    
T Consensus        86 ~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----  161 (264)
T 2pd6_A           86 QACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVG----  161 (264)
T ss_dssp             HHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTT----
T ss_pred             HHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCC----
Confidence                  4 99999999865421    34567788999999999999987653   13 469999999865443211    


Q ss_pred             cccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCC
Q 039049          139 SPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGE  215 (305)
Q Consensus       139 ~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  215 (305)
                                 .      ..|+.+|.+.|.+.+.++.+   .+++++++||+.++++......   ..+......+.   
T Consensus       162 -----------~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~---  218 (264)
T 2pd6_A          162 -----------Q------TNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVP---QKVVDKITEMI---  218 (264)
T ss_dssp             -----------B------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-------------CTGGGC---
T ss_pred             -----------C------hhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcC---HHHHHHHHHhC---
Confidence                       1      67999999999999988877   6899999999999998643210   00111111111   


Q ss_pred             CCCCCccceeHHHHHHHHHHhhcccc---cCceEEEecC-CcCHH
Q 039049          216 YPNTTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS-VAHWS  256 (305)
Q Consensus       216 ~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~-~~s~~  256 (305)
                         ....+++++|+|++++.+++...   .+..+++++. .++..
T Consensus       219 ---~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~  260 (264)
T 2pd6_A          219 ---PMGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGGLFMAEN  260 (264)
T ss_dssp             ---TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC-----
T ss_pred             ---CCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCceeccc
Confidence               13457899999999999987643   2445777644 44433

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.94  E-value=2.5e-25  Score=184.56  Aligned_cols=220  Identities=14%  Similarity=0.095  Sum_probs=159.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHh--------cC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAI--------QG   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~--------~~   73 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.+......  ..+.....++.++++|+.|++++.+++        .+
T Consensus        10 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   87 (260)
T 2ae2_A           10 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCL--TQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   87 (260)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            67999999999999999999999999999999865433211  111111346889999999998888877        46


Q ss_pred             CCEEEEeccccccC----CCCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVP----YDNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|+||||||.....    ...+.+...+++|+.++.++++++.    +. +.++||++||...+.+.+.           
T Consensus        88 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~-----------  155 (260)
T 2ae2_A           88 LNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKAS-ERGNVVFISSVSGALAVPY-----------  155 (260)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-SSEEEEEECCGGGTSCCTT-----------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcchhhccCCCC-----------
Confidence            89999999976532    1345677789999999999999884    34 5689999999875432211           


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCch--HHHHHHHHhcCCCCCCCCC
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTST--LLLILAMVKGLRGEYPNTT  220 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  220 (305)
                          .      ..|+.||...+.+.+.++.+.   ++++++++|+.+.++.........  ...+.......+      .
T Consensus       156 ----~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~------~  219 (260)
T 2ae2_A          156 ----E------AVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCA------L  219 (260)
T ss_dssp             ----C------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTST------T
T ss_pred             ----c------chHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCC------C
Confidence                1      679999999999999988775   899999999999876421100000  011112222211      3


Q ss_pred             ccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          221 VGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       221 ~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      ..+++++|+|+++++++..+.   .+..+++.|.
T Consensus       220 ~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG  253 (260)
T 2ae2_A          220 RRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGG  253 (260)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence            468999999999999987543   2456777644

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.94  E-value=2.1e-25  Score=185.10  Aligned_cols=225  Identities=11%  Similarity=0.017  Sum_probs=161.2

Q ss_pred             CcEEEeCCc--chHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            2 PEYCVTGGT--GFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~~--G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      |+++||||+  |+||+++++.|+++|++|++++|+.........+...   .+++.++++|+.|.+++.++++       
T Consensus         9 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (261)
T 2wyu_A            9 KKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEA---LGGALLFRADVTQDEELDALFAGVKEAFG   85 (261)
T ss_dssp             CEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHH---TTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh---cCCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            579999999  9999999999999999999999986411122222111   1247889999999998888775       


Q ss_pred             CCCEEEEecccccc--------CCCCchhhhhhhhhHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCCCcccCC
Q 039049           73 GVDGVFHTASPVLV--------PYDNNIQATLIDPCIKGTLNVLSSCKKAK-SVKRVVLTSSCSSIRYRHDAQQVSPLNE  143 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~E  143 (305)
                      ++|+||||||....        ....+.+...+++|+.++.++++++...- ...+||++||...+.+.+.         
T Consensus        86 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~---------  156 (261)
T 2wyu_A           86 GLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPK---------  156 (261)
T ss_dssp             SEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTT---------
T ss_pred             CCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCCC---------
Confidence            68999999997642        12455677899999999999999987641 1258999999765433211         


Q ss_pred             CCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCC
Q 039049          144 SHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTT  220 (305)
Q Consensus       144 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (305)
                            .      ..|+.||...+.+.+.++.++   ++++++++|+.++++..... ..............+      .
T Consensus       157 ------~------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~p------~  217 (261)
T 2wyu_A          157 ------Y------NVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSI-PGFTKMYDRVAQTAP------L  217 (261)
T ss_dssp             ------C------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGC-TTHHHHHHHHHHHST------T
T ss_pred             ------c------hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhc-cccHHHHHHHHhcCC------C
Confidence                  1      669999999999999988775   89999999999999854321 111222222322222      2


Q ss_pred             ccceeHHHHHHHHHHhhcccc---cCceEEEecC-CcCHHH
Q 039049          221 VGFVHIDDVVGAHILAMEETR---ASGRLICSSS-VAHWSP  257 (305)
Q Consensus       221 ~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~-~~s~~e  257 (305)
                      ..+.+++|+|+++++++....   .+..+++.+. ..+..|
T Consensus       218 ~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~~~~  258 (261)
T 2wyu_A          218 RRNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYHIMGME  258 (261)
T ss_dssp             SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBC--
T ss_pred             CCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCCccccCCC
Confidence            457899999999999997543   2456888643 444333

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.94  E-value=1e-24  Score=182.93  Aligned_cols=224  Identities=17%  Similarity=0.167  Sum_probs=161.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCc---------ccchhhh-hhccCccCceEEEEccCCCcchHHHHh
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPED---------LSKVGFL-WELNGAEERLKIMKADLLMEGSFDEAI   71 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~---------~~~~~~~-~~~~~~~~~~~~~~~D~~d~~~~~~~~   71 (305)
                      |+++||||+|+||+++++.|+++|++|++++|++..         ....... ........++.++++|+.|.+++.+++
T Consensus        11 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   90 (281)
T 3s55_A           11 KTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESFV   90 (281)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence            679999999999999999999999999999997432         1111111 111122457899999999999888877


Q ss_pred             c-------CCCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCC
Q 039049           72 Q-------GVDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQ  136 (305)
Q Consensus        72 ~-------~~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~  136 (305)
                      +       ++|++|||||......    ..+.+...+++|+.++.++++++.    +. +..+||++||...+.+.... 
T Consensus        91 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~-  168 (281)
T 3s55_A           91 AEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKR-NYGRIVTVSSMLGHSANFAQ-  168 (281)
T ss_dssp             HHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGGSCCTTC-
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEECChhhcCCCCCC-
Confidence            5       7899999999876432    455677889999999999999863    34 55799999998765432211 


Q ss_pred             CCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCC----------CchHH
Q 039049          137 QVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQP----------TSTLL  203 (305)
Q Consensus       137 ~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~----------~~~~~  203 (305)
                                          ..|+.||...+.+.+.++.+   +|+++++++|+.++++......          .....
T Consensus       169 --------------------~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  228 (281)
T 3s55_A          169 --------------------ASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLK  228 (281)
T ss_dssp             --------------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHH
T ss_pred             --------------------chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchh
Confidence                                67999999999999999876   4899999999999998643210          00000


Q ss_pred             HHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          204 LILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      .........    ....+.+.+++|+|+++++++.....   +..+++.|.
T Consensus       229 ~~~~~~~~~----~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG  275 (281)
T 3s55_A          229 DVESVFASL----HLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAG  275 (281)
T ss_dssp             HHHHHHHHH----CSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHhh----hccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCC
Confidence            001100000    11136789999999999999986543   556888643

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.94  E-value=1.2e-25  Score=184.71  Aligned_cols=219  Identities=16%  Similarity=0.134  Sum_probs=158.3

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEE-EeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTT-VRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      .|+|+||||+|+||++++++|+++|++|+++ .|+.........  .......++.++++|+.|.+++.++++       
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSK--QIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWG   78 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHH--HHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH--HHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999995 676543222111  111113468899999999998888776       


Q ss_pred             CCCEEEEeccccccC----CCCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           73 GVDGVFHTASPVLVP----YDNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      ++|+|||+||.....    ...+.+...+++|+.++.++++++...   .+.++||++||...+.+.+.           
T Consensus        79 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-----------  147 (244)
T 1edo_A           79 TIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIG-----------  147 (244)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT-----------
T ss_pred             CCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCC-----------
Confidence            689999999986642    134566778999999999999887552   15679999999875543211           


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                          .      ..|+.+|...+.+.+.++.+   .+++++++||+.++++.....   ............+      ...
T Consensus       148 ----~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~------~~~  208 (244)
T 1edo_A          148 ----Q------ANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL---GEDMEKKILGTIP------LGR  208 (244)
T ss_dssp             ----C------HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT---CHHHHHHHHTSCT------TCS
T ss_pred             ----C------ccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhc---ChHHHHHHhhcCC------CCC
Confidence                1      67999999999999888776   489999999999998753221   1112222222211      345


Q ss_pred             ceeHHHHHHHHHHhhcccc----cCceEEEecC
Q 039049          223 FVHIDDVVGAHILAMEETR----ASGRLICSSS  251 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~----~~~~~~~~~~  251 (305)
                      +++++|+|+++++++..+.    .+..+++.+.
T Consensus       209 ~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gG  241 (244)
T 1edo_A          209 TGQPENVAGLVEFLALSPAASYITGQAFTIDGG  241 (244)
T ss_dssp             CBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTT
T ss_pred             CCCHHHHHHHHHHHhCCCccCCcCCCEEEeCCC
Confidence            8999999999999984432    2456777654

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.94  E-value=1.3e-25  Score=185.86  Aligned_cols=219  Identities=13%  Similarity=0.083  Sum_probs=157.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.+ ......+   .....++.++++|+.|.+++.++++       ++
T Consensus         5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~l---~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   80 (255)
T 2q2v_A            5 KTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP-APALAEI---ARHGVKAVHHPADLSDVAQIEALFALAEREFGGV   80 (255)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC-HHHHHHH---HTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch-HHHHHHH---HhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999865 2111112   1123468889999999999888876       79


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |+||||||......    ..+.+...+++|+.++.++.+.+    ++. +.++||++||...+.+.+.            
T Consensus        81 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~------------  147 (255)
T 2q2v_A           81 DILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRAR-NWGRIINIASVHGLVGSTG------------  147 (255)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCGGGTSCCTT------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEcCchhccCCCC------------
Confidence            99999999765321    34567778999999877777665    455 6689999999876543211            


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHH---H----HHHHhcCCCCC
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLL---I----LAMVKGLRGEY  216 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~---~----~~~~~~~~~~~  216 (305)
                         .      ..|+.+|...+.+.+.++.+.   +++++++||+.++++............   .    .... ..    
T Consensus       148 ---~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~----  213 (255)
T 2q2v_A          148 ---K------AAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLL-AE----  213 (255)
T ss_dssp             ---B------HHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHH-TT----
T ss_pred             ---c------hhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHH-hc----
Confidence               1      679999999999999988774   799999999999987421100000000   0    0110 11    


Q ss_pred             CCCCccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          217 PNTTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       217 ~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      ......+++++|+|+++++++..+.   .+..+++.+.
T Consensus       214 ~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG  251 (255)
T 2q2v_A          214 KQPSLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDGG  251 (255)
T ss_dssp             TCTTCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             cCCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECCC
Confidence            1114568999999999999987643   2456777654

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.94  E-value=1.9e-25  Score=184.84  Aligned_cols=221  Identities=16%  Similarity=0.074  Sum_probs=163.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.+........  ......++.++++|+.|.+++.++++       ++
T Consensus        13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   90 (256)
T 3gaf_A           13 AVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAA--IRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKI   90 (256)
T ss_dssp             CEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH--HHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH--HHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            6799999999999999999999999999999986543332211  11224578999999999998887775       78


Q ss_pred             CEEEEeccccccCC---CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           75 DGVFHTASPVLVPY---DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        75 d~Vi~~a~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      |++|||||......   ..+.+...+++|+.++.++++++.    +. +..+||++||...+.+.+.             
T Consensus        91 d~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~-------------  156 (256)
T 3gaf_A           91 TVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKA-GGGAILNISSMAGENTNVR-------------  156 (256)
T ss_dssp             CEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCGGGTCCCTT-------------
T ss_pred             CEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcCHHHcCCCCC-------------
Confidence            99999999876432   455677889999999999999874    33 5579999999876443221             


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccce
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFV  224 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  224 (305)
                        .      ..|+.||...+.+.+.++.++   ++++..++|+.+.++......  ............+      ...+.
T Consensus       157 --~------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~p------~~r~~  220 (256)
T 3gaf_A          157 --M------ASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVL--TPEIERAMLKHTP------LGRLG  220 (256)
T ss_dssp             --C------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHC--CHHHHHHHHTTCT------TSSCB
T ss_pred             --c------hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhcc--CHHHHHHHHhcCC------CCCCC
Confidence              1      679999999999999988774   899999999999886421110  0112222222222      45689


Q ss_pred             eHHHHHHHHHHhhcccc---cCceEEEec-CCcC
Q 039049          225 HIDDVVGAHILAMEETR---ASGRLICSS-SVAH  254 (305)
Q Consensus       225 ~v~D~a~~~~~~~~~~~---~~~~~~~~~-~~~s  254 (305)
                      +++|+|+++++++....   .+..+++.| ...+
T Consensus       221 ~~~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~  254 (256)
T 3gaf_A          221 EAQDIANAALFLCSPAAAWISGQVLTVSGGGVQE  254 (256)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCC
T ss_pred             CHHHHHHHHHHHcCCcccCccCCEEEECCCcccc
Confidence            99999999999997543   355688864 3443

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.94  E-value=4.8e-25  Score=181.75  Aligned_cols=214  Identities=17%  Similarity=0.137  Sum_probs=153.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc---CCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ---GVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~Vi   78 (305)
                      ++|+||||+|+||+++++.|+++|++|++++|+.++......  ..   ..++.++.+|+.+.+.+.++++   ++|+||
T Consensus        15 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~--~~---~~~~~~~~~D~~~~~~~~~~~~~~~~id~li   89 (249)
T 3f9i_A           15 KTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGN--AL---KDNYTIEVCNLANKEECSNLISKTSNLDILV   89 (249)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HH---CSSEEEEECCTTSHHHHHHHHHTCSCCSEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH--Hh---ccCccEEEcCCCCHHHHHHHHHhcCCCCEEE
Confidence            689999999999999999999999999999997654332211  11   2378899999999999998886   689999


Q ss_pred             EeccccccC----CCCchhhhhhhhhHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcc
Q 039049           79 HTASPVLVP----YDNNIQATLIDPCIKGTLNVLSSCKK----AKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPD  150 (305)
Q Consensus        79 ~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~  150 (305)
                      |+||.....    ...+.+...+++|+.++.++++++..    . +..+||++||...+.+.+..               
T Consensus        90 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~---------------  153 (249)
T 3f9i_A           90 CNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQK-RYGRIINISSIVGIAGNPGQ---------------  153 (249)
T ss_dssp             ECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCCCC--CCSCS---------------
T ss_pred             ECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEEccHHhccCCCCC---------------
Confidence            999987643    14556778999999999999888743    3 55799999998766543221               


Q ss_pred             cccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHH
Q 039049          151 YCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHID  227 (305)
Q Consensus       151 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  227 (305)
                            ..|+.||.+.+.+.+.++.+   .++++.+++|+.+.++......   .........+.+      ...+.+++
T Consensus       154 ------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~------~~~~~~~~  218 (249)
T 3f9i_A          154 ------ANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLN---EKQREAIVQKIP------LGTYGIPE  218 (249)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CC---HHHHHHHHHHCT------TCSCBCHH
T ss_pred             ------chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccC---HHHHHHHHhcCC------CCCCcCHH
Confidence                  67999999999999988876   4899999999999987643321   112222222222      46689999


Q ss_pred             HHHHHHHHhhccccc---CceEEEecC
Q 039049          228 DVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       228 D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      |+|++++++++....   +..+++.+.
T Consensus       219 dva~~~~~l~s~~~~~~tG~~~~vdgG  245 (249)
T 3f9i_A          219 DVAYAVAFLASNNASYITGQTLHVNGG  245 (249)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHcCCccCCccCcEEEECCC
Confidence            999999999986543   556888654

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.94  E-value=1.4e-25  Score=186.19  Aligned_cols=222  Identities=15%  Similarity=0.102  Sum_probs=160.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.+......  ..+.....++.++.+|+.|.+++.++++       ++
T Consensus        15 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   92 (260)
T 2zat_A           15 KVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTV--ATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGV   92 (260)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            67999999999999999999999999999999865332211  1111123468889999999988887765       78


Q ss_pred             CEEEEecccccc-----CCCCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           75 DGVFHTASPVLV-----PYDNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        75 d~Vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      |+||||||....     ....+.+...+++|+.++.++++++.    +. +.++||++||..++.+.+.           
T Consensus        93 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~-----------  160 (260)
T 2zat_A           93 DILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKR-GGGSVLIVSSVGAYHPFPN-----------  160 (260)
T ss_dssp             CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCGGGTSCCTT-----------
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEechhhcCCCCC-----------
Confidence            999999997531     12345667789999999999988874    34 6689999999876543211           


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                          .      ..|+.+|...+.+.+.++.+.   ++++++++|+.+.++........ ...........+      .+.
T Consensus       161 ----~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~------~~~  223 (260)
T 2zat_A          161 ----L------GPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMD-KARKEYMKESLR------IRR  223 (260)
T ss_dssp             ----B------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSS-HHHHHHHHHHHT------CSS
T ss_pred             ----c------hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccC-hHHHHHHHhcCC------CCC
Confidence                1      679999999999999988764   89999999999988753210000 001111111111      356


Q ss_pred             ceeHHHHHHHHHHhhcccc---cCceEEEec-CCcC
Q 039049          223 FVHIDDVVGAHILAMEETR---ASGRLICSS-SVAH  254 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~---~~~~~~~~~-~~~s  254 (305)
                      +.+++|+|+++.+++..+.   .+..++++| ...|
T Consensus       224 ~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~s  259 (260)
T 2zat_A          224 LGNPEDCAGIVSFLCSEDASYITGETVVVGGGTASR  259 (260)
T ss_dssp             CBCGGGGHHHHHHHTSGGGTTCCSCEEEESTTCCCC
T ss_pred             CCCHHHHHHHHHHHcCcccCCccCCEEEECCCcccc
Confidence            8999999999999997654   355688864 4443

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.94  E-value=4e-25  Score=183.27  Aligned_cols=209  Identities=14%  Similarity=0.125  Sum_probs=156.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.+.......  ..   ..++.++++|+.|++++.++++       ++
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   82 (260)
T 1nff_A            8 KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAA--EL---ADAARYVHLDVTQPAQWKAAVDTAVTAFGGL   82 (260)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HT---GGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--Hh---hcCceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            579999999999999999999999999999998653322111  11   1247889999999998888876       79


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |+||||||......    ..+.+...+++|+.++.++.+.+    ++. +.++||++||...+.+.+.            
T Consensus        83 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~------------  149 (260)
T 1nff_A           83 HVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA-GRGSIINISSIEGLAGTVA------------  149 (260)
T ss_dssp             CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCTT------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEEeehhhcCCCCC------------
Confidence            99999999765421    34567779999999997666654    445 5689999999876543211            


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                         .      ..|+.||...+.+.+.++.+   .+++++++||+.++++....  ..           .... ......+
T Consensus       150 ---~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--~~-----------~~~~-~~~~~~~  206 (260)
T 1nff_A          150 ---C------HGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDW--VP-----------EDIF-QTALGRA  206 (260)
T ss_dssp             ---B------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTT--SC-----------TTCS-CCSSSSC
T ss_pred             ---c------hhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCcccc--ch-----------hhHH-hCccCCC
Confidence               1      67999999999999988876   58999999999999986321  00           0000 1113467


Q ss_pred             eeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          224 VHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      .+++|+|+++++++....   .+..+++.+.
T Consensus       207 ~~~~dvA~~v~~l~s~~~~~~~G~~~~v~gG  237 (260)
T 1nff_A          207 AEPVEVSNLVVYLASDESSYSTGAEFVVDGG  237 (260)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence            899999999999997643   2456888654

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.94  E-value=2.5e-25  Score=186.45  Aligned_cols=231  Identities=17%  Similarity=0.111  Sum_probs=163.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCc---------ccchhh-hhhccCccCceEEEEccCCCcchHHHHh
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPED---------LSKVGF-LWELNGAEERLKIMKADLLMEGSFDEAI   71 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~---------~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~   71 (305)
                      |++|||||+|+||+++++.|+++|++|++++|+...         ...... .........++.++++|+.|.+++.+++
T Consensus        14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   93 (278)
T 3sx2_A           14 KVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAAL   93 (278)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence            679999999999999999999999999999987321         111111 1111122457899999999999888877


Q ss_pred             c-------CCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCCCCcc
Q 039049           72 Q-------GVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKA----KSVKRVVLTSSCSSIRYRHDAQQVSP  140 (305)
Q Consensus        72 ~-------~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~  140 (305)
                      +       ++|++|||||........+.+...+++|+.++.++++++...    +...+||++||...+.+...      
T Consensus        94 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------  167 (278)
T 3sx2_A           94 QAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGS------  167 (278)
T ss_dssp             HHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCC------
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCcc------
Confidence            5       789999999987765456778889999999999999987432    12468999999875443210      


Q ss_pred             cCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHh-cC-CCC
Q 039049          141 LNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVK-GL-RGE  215 (305)
Q Consensus       141 ~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~-~~-~~~  215 (305)
                            +.+.     ...|+.||.+.+.+.+.++.++   +++++.++|+.+.++.....  .....+..... .. ...
T Consensus       168 ------~~~~-----~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~~~  234 (278)
T 3sx2_A          168 ------ADPG-----SVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNE--FTREWLAKMAAATDTPGA  234 (278)
T ss_dssp             ------SSHH-----HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSH--HHHHHHHHHHHHCC--CT
T ss_pred             ------CCCC-----chHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhh--hHHHHHhhccchhhhhhh
Confidence                  0111     1669999999999999988775   69999999999998864321  11111211111 11 111


Q ss_pred             CCCC-CccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          216 YPNT-TVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       216 ~~~~-~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      +... ...+++++|+|+++++++....   .+..+++.|.
T Consensus       235 ~~~~~p~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  274 (278)
T 3sx2_A          235 MGNAMPVEVLAPEDVANAVAWLVSDQARYITGVTLPVDAG  274 (278)
T ss_dssp             TSCSSSCSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             hhhhcCcCcCCHHHHHHHHHHHhCcccccccCCEEeECCC
Confidence            2221 3678999999999999997643   2456777654

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.94  E-value=3.9e-25  Score=183.87  Aligned_cols=219  Identities=16%  Similarity=0.143  Sum_probs=157.3

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccc-hhhhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSK-VGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      |++++||||+|+||+++++.|+++|++|+++.|+...... ....  ......++.++++|+.|.+++.++++       
T Consensus         7 ~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   84 (264)
T 3i4f_A            7 VRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKET--YKDVEERLQFVQADVTKKEDLHKIVEEAMSHFG   84 (264)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH--TGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             cCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHH--HHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            4689999999999999999999999999999887643221 1111  11223478999999999998888775       


Q ss_pred             CCCEEEEeccccc--cC----CCCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccC
Q 039049           73 GVDGVFHTASPVL--VP----YDNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLN  142 (305)
Q Consensus        73 ~~d~Vi~~a~~~~--~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  142 (305)
                      ++|+||||||...  ..    ...+.+...+++|+.++.++++++    ++. +..++|++||.++....+.        
T Consensus        85 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~iss~~~~~~~~~--------  155 (264)
T 3i4f_A           85 KIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQ-NFGRIINYGFQGADSAPGW--------  155 (264)
T ss_dssp             CCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCTTGGGCCCC--------
T ss_pred             CCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-CCCeEEEEeechhcccCCC--------
Confidence            7899999999422  11    134566788999999999999988    555 6679999998754321110        


Q ss_pred             CCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCC
Q 039049          143 ESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNT  219 (305)
Q Consensus       143 E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (305)
                           .+.      ..|+.+|.+.+.+.+.++.+   .++++++++|+.++++.....   ............      .
T Consensus       156 -----~~~------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~------p  215 (264)
T 3i4f_A          156 -----IYR------SAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEAT---IQEARQLKEHNT------P  215 (264)
T ss_dssp             -----TTC------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCC---HHHHHHC------------
T ss_pred             -----CCC------chhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhc---cHHHHHHHhhcC------C
Confidence                 011      67999999999999988877   589999999999999864322   111111111111      1


Q ss_pred             CccceeHHHHHHHHHHhhccccc---CceEEEec
Q 039049          220 TVGFVHIDDVVGAHILAMEETRA---SGRLICSS  250 (305)
Q Consensus       220 ~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~  250 (305)
                      ...+.+++|+|+++++++.....   +..++++|
T Consensus       216 ~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdG  249 (264)
T 3i4f_A          216 IGRSGTGEDIARTISFLCEDDSDMITGTIIEVTG  249 (264)
T ss_dssp             --CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESC
T ss_pred             CCCCcCHHHHHHHHHHHcCcccCCCCCcEEEEcC
Confidence            45578999999999999986542   55688854

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.94  E-value=5.2e-25  Score=182.40  Aligned_cols=215  Identities=17%  Similarity=0.150  Sum_probs=154.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|++.|++|++++|+.+........     ...++.++++|+.|.+++.++++       ++
T Consensus         8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   82 (257)
T 3tpc_A            8 RVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAE-----LGAAVRFRNADVTNEADATAALAFAKQEFGHV   82 (257)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-----------------CEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH-----hCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5799999999999999999999999999999987654332111     13368899999999998888775       78


Q ss_pred             CEEEEeccccccCC--------CCchhhhhhhhhHHHHHHHHHHHHhc---------CCccEEEEeccceeeeccCCCCC
Q 039049           75 DGVFHTASPVLVPY--------DNNIQATLIDPCIKGTLNVLSSCKKA---------KSVKRVVLTSSCSSIRYRHDAQQ  137 (305)
Q Consensus        75 d~Vi~~a~~~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~~v~~SS~~~~~~~~~~~~  137 (305)
                      |++|||||......        ..+.+...+++|+.++.++++++...         .+..+||++||...+.+.+..  
T Consensus        83 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~~~--  160 (257)
T 3tpc_A           83 HGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQ--  160 (257)
T ss_dssp             CEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTC--
T ss_pred             CEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCCCC--
Confidence            99999999875421        34567788999999999999988653         134689999998765543221  


Q ss_pred             CcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCC
Q 039049          138 VSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRG  214 (305)
Q Consensus       138 ~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  214 (305)
                                         ..|+.||.+.+.+.+.++.+   +++++++++||.+.++.......   ..........  
T Consensus       161 -------------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~---~~~~~~~~~~--  216 (257)
T 3tpc_A          161 -------------------AAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQ---DVQDALAASV--  216 (257)
T ss_dssp             -------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC-----------------CCS--
T ss_pred             -------------------cchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCH---HHHHHHHhcC--
Confidence                               67999999999999988877   58999999999999875432110   0111111111  


Q ss_pred             CCCCCC-ccceeHHHHHHHHHHhhccccc-CceEEEecC
Q 039049          215 EYPNTT-VGFVHIDDVVGAHILAMEETRA-SGRLICSSS  251 (305)
Q Consensus       215 ~~~~~~-~~~i~v~D~a~~~~~~~~~~~~-~~~~~~~~~  251 (305)
                          .. ..+.+++|+|++++++++.... +..+++.|.
T Consensus       217 ----p~~~r~~~~~dva~~v~~l~s~~~itG~~i~vdGG  251 (257)
T 3tpc_A          217 ----PFPPRLGRAEEYAALVKHICENTMLNGEVIRLDGA  251 (257)
T ss_dssp             ----SSSCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             ----CCCCCCCCHHHHHHHHHHHcccCCcCCcEEEECCC
Confidence                12 5689999999999999987544 445777543

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.94  E-value=3.5e-25  Score=183.83  Aligned_cols=218  Identities=17%  Similarity=0.135  Sum_probs=161.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCc-cCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGA-EERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.++.......  .... ..++.++++|+.|++++.++++       +
T Consensus        11 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~--l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   88 (262)
T 3pk0_A           11 RSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVAD--LDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGG   88 (262)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH--HHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH--HHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            6899999999999999999999999999999987643322111  1111 2478999999999998888765       7


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceee-eccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSI-RYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~-~~~~~~~~~~~~~E~~  145 (305)
                      +|++|||||......    ..+.+...+++|+.++.++++++...   .+..++|++||.... .+.+.           
T Consensus        89 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~-----------  157 (262)
T 3pk0_A           89 IDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPG-----------  157 (262)
T ss_dssp             CSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTT-----------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCC-----------
Confidence            899999999865432    44567778999999999999887543   155799999997642 21111           


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                                ...|+.||...+.+.+.++.+   +|+++++++|+.++++.....   ............+      ...
T Consensus       158 ----------~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~p------~~r  218 (262)
T 3pk0_A          158 ----------WSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLEN---GEEYIASMARSIP------AGA  218 (262)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTT---CHHHHHHHHTTST------TSS
T ss_pred             ----------ChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcccccc---CHHHHHHHHhcCC------CCC
Confidence                      167999999999999999877   589999999999998753221   1122333333222      345


Q ss_pred             ceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          223 FVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      +.+++|+|+++.+++....   .+..+++.|.
T Consensus       219 ~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG  250 (262)
T 3pk0_A          219 LGTPEDIGHLAAFLATKEAGYITGQAIAVDGG  250 (262)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence            7899999999999997653   3556788643

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.94  E-value=8e-25  Score=182.80  Aligned_cols=220  Identities=14%  Similarity=0.087  Sum_probs=156.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHh--------cC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAI--------QG   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~--------~~   73 (305)
                      |+++||||+|+||+++++.|++.|++|++++|+.+......  ........++.++++|+.|++++.+++        .+
T Consensus        22 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   99 (273)
T 1ae1_A           22 TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECL--EIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   99 (273)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            67999999999999999999999999999999865433211  111112347889999999998888776        46


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|++|||||......    ..+.+...+++|+.++.++++++.    +. +.++||++||...+.+.+.           
T Consensus       100 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~~~~~-----------  167 (273)
T 1ae1_A          100 LNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKAS-QNGNVIFLSSIAGFSALPS-----------  167 (273)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TSEEEEEECCGGGTSCCTT-----------
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcCHhhcCCCCC-----------
Confidence            899999999865432    345677788999999999999873    34 5679999999876543211           


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCc---hHHHHHHHHhcCCCCCCCC
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTS---TLLLILAMVKGLRGEYPNT  219 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~---~~~~~~~~~~~~~~~~~~~  219 (305)
                          .      ..|+.||.+.+.+.+.++.+.   ++++++++|+.++++........   ............+      
T Consensus       168 ----~------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p------  231 (273)
T 1ae1_A          168 ----V------SLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTP------  231 (273)
T ss_dssp             ----C------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHST------
T ss_pred             ----c------chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCC------
Confidence                1      679999999999999888765   89999999999999864321110   0111222222222      


Q ss_pred             CccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          220 TVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       220 ~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      ...+.+++|+|+++++++....   .+..+++.|.
T Consensus       232 ~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  266 (273)
T 1ae1_A          232 MGRAGKPQEVSALIAFLCFPAASYITGQIIWADGG  266 (273)
T ss_dssp             TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCcCHHHHHHHHHHHhCccccCcCCCEEEECCC
Confidence            3357899999999999987543   2446777544

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.94  E-value=6.7e-25  Score=184.70  Aligned_cols=217  Identities=19%  Similarity=0.170  Sum_probs=161.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCcc-CceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAE-ERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |+++||||+|+||+++++.|++.|++|++++|+.+........  +.... .++.++++|+.|.+++.++++       +
T Consensus        42 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~--l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  119 (293)
T 3rih_A           42 RSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAE--LGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGA  119 (293)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHH--HTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH--HHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            6799999999999999999999999999999987654432211  11112 478999999999988877664       6


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceee-eccCCCCCCcccCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSI-RYRHDAQQVSPLNES  144 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~-~~~~~~~~~~~~~E~  144 (305)
                      +|++|||||......    ..+.+...+++|+.++.++++++.    +. +..+||++||.... .+.+.          
T Consensus       120 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iV~isS~~~~~~~~~~----------  188 (293)
T 3rih_A          120 LDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTAS-GRGRVILTSSITGPVTGYPG----------  188 (293)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH-SSCEEEEECCSBTTTBBCTT----------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEeChhhccCCCCC----------
Confidence            799999999875432    455677899999999999999873    44 56799999997642 22111          


Q ss_pred             CCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCc
Q 039049          145 HWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTV  221 (305)
Q Consensus       145 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (305)
                                 ...|+.||...+.+.+.++.+   .|+++++++|+.++++......   ...........+      ..
T Consensus       189 -----------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~---~~~~~~~~~~~p------~~  248 (293)
T 3rih_A          189 -----------WSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMG---EEYISGMARSIP------MG  248 (293)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTC---HHHHHHHHTTST------TS
T ss_pred             -----------CHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhcc---HHHHHHHHhcCC------CC
Confidence                       167999999999999998877   4899999999999987532111   122233333222      34


Q ss_pred             cceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          222 GFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      .+..++|+|+++++++....   .+..+++.|.
T Consensus       249 r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG  281 (293)
T 3rih_A          249 MLGSPVDIGHLAAFLATDEAGYITGQAIVVDGG  281 (293)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            46789999999999997543   3556788643

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.94  E-value=7e-25  Score=182.62  Aligned_cols=211  Identities=17%  Similarity=0.126  Sum_probs=158.1

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      .|+||||||+|+||+++++.|++.|++|++++|+.....            ..+..+++|+.|.+++.++++       +
T Consensus        14 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (269)
T 3vtz_A           14 DKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV------------NVSDHFKIDVTNEEEVKEAVEKTTKKYGR   81 (269)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT------------TSSEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc------------CceeEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            378999999999999999999999999999999875331            146788999999998888775       7


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKK----AKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|++|||||......    ..+.+...+++|+.++.++++++..    . +..+||++||...+.+.+..          
T Consensus        82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~----------  150 (269)
T 3vtz_A           82 IDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAI-GHGSIINIASVQSYAATKNA----------  150 (269)
T ss_dssp             CCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSBCTTC----------
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEECchhhccCCCCC----------
Confidence            899999999865432    3455677889999999999988643    3 55799999998865543221          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEecCceecCCCCC--------CCCchHHHHHHHHhcCCCC
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC--GIDMVVVNPSFVVGPLLAP--------QPTSTLLLILAMVKGLRGE  215 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~i~Rp~~v~G~~~~~--------~~~~~~~~~~~~~~~~~~~  215 (305)
                                 ..|+.||.+.+.+.+.++.++  ++++.+++||.+.++....        ........+.......+  
T Consensus       151 -----------~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--  217 (269)
T 3vtz_A          151 -----------AAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHP--  217 (269)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHST--
T ss_pred             -----------hhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCC--
Confidence                       679999999999999998887  7999999999998864210        00000111222222222  


Q ss_pred             CCCCCccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          216 YPNTTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       216 ~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                          ...+.+++|+|+++++++....   .+..+++.|.
T Consensus       218 ----~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  252 (269)
T 3vtz_A          218 ----MGRIGRPEEVAEVVAFLASDRSSFITGACLTVDGG  252 (269)
T ss_dssp             ----TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ----CCCCcCHHHHHHHHHHHhCCccCCCcCcEEEECCC
Confidence                4568899999999999997643   3556888654

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.94  E-value=3.7e-25  Score=185.54  Aligned_cols=228  Identities=14%  Similarity=0.114  Sum_probs=160.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCC----------cccchhhh-hhccCccCceEEEEccCCCcchHHHH
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPE----------DLSKVGFL-WELNGAEERLKIMKADLLMEGSFDEA   70 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~----------~~~~~~~~-~~~~~~~~~~~~~~~D~~d~~~~~~~   70 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+..          +....... ........++.++++|+.|.+++.++
T Consensus        16 k~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   95 (280)
T 3pgx_A           16 RVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALREL   95 (280)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence            67999999999999999999999999999998532          11111111 11222345788999999999988887


Q ss_pred             hc-------CCCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCC
Q 039049           71 IQ-------GVDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKK----AKSVKRVVLTSSCSSIRYRHDA  135 (305)
Q Consensus        71 ~~-------~~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~  135 (305)
                      ++       ++|++|||||......    ..+.+...+++|+.++.++++++..    .+...+||++||...+.+.+..
T Consensus        96 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  175 (280)
T 3pgx_A           96 VADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGN  175 (280)
T ss_dssp             HHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTB
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccCCCCc
Confidence            75       7899999999876432    4556777899999999999998743    2124689999998765432211


Q ss_pred             CCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHh-c
Q 039049          136 QQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVK-G  211 (305)
Q Consensus       136 ~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~-~  211 (305)
                                           ..|+.||.+.+.+.+.++.+   +++++++++|+.++++.....  .....+..... .
T Consensus       176 ---------------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~~  232 (280)
T 3pgx_A          176 ---------------------GHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPE--AMMEIFARHPSFV  232 (280)
T ss_dssp             ---------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHH--HHHHHHHHCGGGG
T ss_pred             ---------------------hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchh--hhhhhhhcCchhh
Confidence                                 67999999999999998877   589999999999999864310  00011110000 0


Q ss_pred             CCC-CCCCCCccceeHHHHHHHHHHhhcccc---cCceEEEecCC
Q 039049          212 LRG-EYPNTTVGFVHIDDVVGAHILAMEETR---ASGRLICSSSV  252 (305)
Q Consensus       212 ~~~-~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~~  252 (305)
                      ... ........+++++|+|+++++++....   .+..+++.|..
T Consensus       233 ~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  277 (280)
T 3pgx_A          233 HSFPPMPVQPNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGA  277 (280)
T ss_dssp             GGSCCBTTBCSSCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred             hhhhhcccCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            011 111222248999999999999997654   24567886553

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.94  E-value=3.9e-25  Score=183.10  Aligned_cols=219  Identities=16%  Similarity=0.113  Sum_probs=161.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEE-EeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTT-VRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |++|||||+|+||+++++.|+++|++|+++ .|+.........  .......++.++++|+.|.+++.++++       +
T Consensus         5 k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            5 KCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAE--EIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHH--HHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH--HHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            579999999999999999999999999987 666543322211  122224578999999999998888775       5


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|++|||||......    ..+.+...+++|+.++.++++++.    +. +..+||++||...+.+.+..          
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~~~~~~----------  151 (258)
T 3oid_A           83 LDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKN-GGGHIVSISSLGSIRYLENY----------  151 (258)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-TCEEEEEEEEGGGTSBCTTC----------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECchhhCCCCCCc----------
Confidence            799999999755432    345667789999999999998874    33 55799999998765432211          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                                 ..|+.||.+.+.+.+.++.++   ++++..++|+.+.++....... ............+      ...
T Consensus       152 -----------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p------~~r  213 (258)
T 3oid_A          152 -----------TTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPN-REDLLEDARQNTP------AGR  213 (258)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTT-HHHHHHHHHHHCT------TSS
T ss_pred             -----------HHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhccc-CHHHHHHHHhcCC------CCC
Confidence                       679999999999999998775   7999999999998875432211 1222233333322      456


Q ss_pred             ceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          223 FVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      +.+++|+|+++++++....   .+..+++.|.
T Consensus       214 ~~~~~dva~~v~~L~s~~~~~itG~~i~vdGG  245 (258)
T 3oid_A          214 MVEIKDMVDTVEFLVSSKADMIRGQTIIVDGG  245 (258)
T ss_dssp             CBCHHHHHHHHHHHTSSTTTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHhCcccCCccCCEEEECCC
Confidence            8899999999999998654   2556888643

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.93  E-value=9.8e-25  Score=182.65  Aligned_cols=217  Identities=15%  Similarity=0.092  Sum_probs=157.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEe-CCCcccchh-hhhhccCccCceEEEEccCCCc----chHHHHhc---
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVR-DPEDLSKVG-FLWELNGAEERLKIMKADLLME----GSFDEAIQ---   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r-~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~----~~~~~~~~---   72 (305)
                      |+++||||+|+||+++++.|++.|++|++++| +.+...... .+...  ...++.++++|+.|.    +++.++++   
T Consensus        12 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   89 (276)
T 1mxh_A           12 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAA--RAGSAVLCKGDLSLSSSLLDCCEDIIDCSF   89 (276)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--STTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHh--cCCceEEEeccCCCccccHHHHHHHHHHHH
Confidence            57999999999999999999999999999999 644322211 11111  023688999999999    88877765   


Q ss_pred             ----CCCEEEEeccccccCC----CC-----------chhhhhhhhhHHHHHHHHHHHHhc--CCc------cEEEEecc
Q 039049           73 ----GVDGVFHTASPVLVPY----DN-----------NIQATLIDPCIKGTLNVLSSCKKA--KSV------KRVVLTSS  125 (305)
Q Consensus        73 ----~~d~Vi~~a~~~~~~~----~~-----------~~~~~~~~~n~~~~~~l~~~~~~~--~~~------~~~v~~SS  125 (305)
                          ++|+||||||......    ..           +.+...+++|+.++.++++++...  .+.      ++||++||
T Consensus        90 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS  169 (276)
T 1mxh_A           90 RAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD  169 (276)
T ss_dssp             HHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECC
T ss_pred             HhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEECc
Confidence                7899999999765432    22           566778999999999999998774  133      79999999


Q ss_pred             ceeeeccCCCCCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchH
Q 039049          126 CSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTL  202 (305)
Q Consensus       126 ~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~  202 (305)
                      ...+.+.+.               .      ..|+.||...+.+.+.++.+.   |+++++++|+.++++ .  ...  .
T Consensus       170 ~~~~~~~~~---------------~------~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~--~~~--~  223 (276)
T 1mxh_A          170 AMTDLPLPG---------------F------CVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P--AMP--Q  223 (276)
T ss_dssp             GGGGSCCTT---------------C------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S--SSC--H
T ss_pred             hhhcCCCCC---------------C------eehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c--cCC--H
Confidence            876543211               1      679999999999999888775   899999999999998 2  111  1


Q ss_pred             HHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          203 LLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      ..........+    . .+++.+++|+|+++++++.....   +..+++.|.
T Consensus       224 ~~~~~~~~~~p----~-~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG  270 (276)
T 1mxh_A          224 ETQEEYRRKVP----L-GQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGG  270 (276)
T ss_dssp             HHHHHHHTTCT----T-TSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHhcCC----C-CCCCCCHHHHHHHHHHHhCccccCccCcEEEECCc
Confidence            22222222211    1 23389999999999999976432   446777654

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.93  E-value=9.7e-25  Score=179.96  Aligned_cols=215  Identities=12%  Similarity=0.050  Sum_probs=147.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.+...           . ++.++.+|+.|.+++.++++       ++
T Consensus         8 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~-----------~-~~~~~~~D~~d~~~~~~~~~~~~~~~g~i   75 (250)
T 2fwm_X            8 KNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQ-----------Y-PFATEVMDVADAAQVAQVCQRLLAETERL   75 (250)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSSC-----------C-SSEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhhc-----------C-CceEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            67999999999999999999999999999999865210           1 36888999999998888775       78


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |+||||||......    ..+.+...+++|+.++.++++++    ++. +.++||++||...+.+.+.            
T Consensus        76 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~~~~~------------  142 (250)
T 2fwm_X           76 DALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQ-RGGAIVTVASDAAHTPRIG------------  142 (250)
T ss_dssp             CEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCCTT------------
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhc-CCCEEEEECchhhCCCCCC------------
Confidence            99999999765422    34567889999999999999988    444 5689999999875433211            


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHH-HHHh-cCCCCCCCCCc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLIL-AMVK-GLRGEYPNTTV  221 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~  221 (305)
                         .      ..|+.+|...+.+.+.++.+.   +++++++||+.++++........ ..... .... ...........
T Consensus       143 ---~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~  212 (250)
T 2fwm_X          143 ---M------SAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVS-DDAEEQRIRGFGEQFKLGIPLG  212 (250)
T ss_dssp             ---C------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------------------
T ss_pred             ---C------chHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccC-hhHHHHHHhhhhhcccccCCCC
Confidence               1      679999999999999888764   89999999999999864321000 00000 0000 00000000133


Q ss_pred             cceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          222 GFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      .+.+++|+|+++++++..+.   .+..+++.|.
T Consensus       213 ~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  245 (250)
T 2fwm_X          213 KIARPQEIANTILFLASDLASHITLQDIVVDGG  245 (250)
T ss_dssp             ---CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            57899999999999997643   2445777543

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.93  E-value=1.2e-24  Score=182.81  Aligned_cols=219  Identities=14%  Similarity=0.039  Sum_probs=158.5

Q ss_pred             CcEEEeCCc--chHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            2 PEYCVTGGT--GFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~~--G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      |+++||||+  |+||+++++.|++.|++|++++|+.........+...   .+++.++++|+.|.+++.++++       
T Consensus        22 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   98 (285)
T 2p91_A           22 KRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKG---FGSDLVVKCDVSLDEDIKNLKKFLEENWG   98 (285)
T ss_dssp             CEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH---TTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh---cCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            579999999  9999999999999999999999986411122222111   1247889999999998887765       


Q ss_pred             CCCEEEEecccccc--------CCCCchhhhhhhhhHHHHHHHHHHHHhcC--CccEEEEeccceeeeccCCCCCCcccC
Q 039049           73 GVDGVFHTASPVLV--------PYDNNIQATLIDPCIKGTLNVLSSCKKAK--SVKRVVLTSSCSSIRYRHDAQQVSPLN  142 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~~  142 (305)
                      ++|+||||||....        ....+.+...+++|+.++.++++++...-  ..++||++||...+.+.+.        
T Consensus        99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------  170 (285)
T 2p91_A           99 SLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPH--------  170 (285)
T ss_dssp             CCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCTT--------
T ss_pred             CCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCCC--------
Confidence            68999999997643        22455677899999999999999987641  2269999999765433211        


Q ss_pred             CCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCC
Q 039049          143 ESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNT  219 (305)
Q Consensus       143 E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (305)
                             .      ..|+.||...+.+.+.++.++   ++++++++|+.++++..... ..............+      
T Consensus       171 -------~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~p------  230 (285)
T 2p91_A          171 -------Y------NVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSI-TGFHLLMEHTTKVNP------  230 (285)
T ss_dssp             -------T------THHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--C-TTHHHHHHHHHHHST------
T ss_pred             -------c------cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcc-cchHHHHHHHHhcCC------
Confidence                   0      569999999999999888764   89999999999999864321 111222222222222      


Q ss_pred             CccceeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          220 TVGFVHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       220 ~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      ...+.+++|+|+++++++.....   +..+++.+.
T Consensus       231 ~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgg  265 (285)
T 2p91_A          231 FGKPITIEDVGDTAVFLCSDWARAITGEVVHVDNG  265 (285)
T ss_dssp             TSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CCCCcCHHHHHHHHHHHcCCcccCCCCCEEEECCC
Confidence            23468999999999999975432   445777544

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.93  E-value=4.6e-25  Score=183.02  Aligned_cols=222  Identities=12%  Similarity=0.052  Sum_probs=156.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc------CCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ------GVD   75 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------~~d   75 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+++................++.++++|+.|++++.++++      ++|
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~gid   87 (260)
T 2z1n_A            8 KLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGGAD   87 (260)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCS
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            57999999999999999999999999999999865433221111000001268899999999998888876      599


Q ss_pred             EEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           76 GVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        76 ~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      +||||||......    ..+.+...+++|+.++.++.+.+.    +. +.++||++||..++.+.+.             
T Consensus        88 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~-------------  153 (260)
T 2z1n_A           88 ILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEK-GWGRMVYIGSVTLLRPWQD-------------  153 (260)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCTT-------------
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECchhhcCCCCC-------------
Confidence            9999999764321    345677889999999977777653    44 6689999999876543211             


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCC------chH-HH-HHHHHhcCCCCC
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPT------STL-LL-ILAMVKGLRGEY  216 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~------~~~-~~-~~~~~~~~~~~~  216 (305)
                        .      ..|+.+|...+.+.+.++.++   ++++++++|+.++++.......      ... .. .......     
T Consensus       154 --~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  220 (260)
T 2z1n_A          154 --L------ALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASR-----  220 (260)
T ss_dssp             --B------HHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------C-----
T ss_pred             --C------chhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhc-----
Confidence              1      679999999999999888775   8999999999999986431100      000 00 0000000     


Q ss_pred             CCCCccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          217 PNTTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       217 ~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                       .....+.+++|+|+++++++..+.   .+..+++.|.
T Consensus       221 -~p~~r~~~~~dva~~v~~l~s~~~~~~tG~~i~vdGG  257 (260)
T 2z1n_A          221 -IPMGRVGKPEELASVVAFLASEKASFITGAVIPVDGG  257 (260)
T ss_dssp             -CTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             -CCCCCccCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence             113457899999999999997643   2445777554

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.93  E-value=3.3e-25  Score=184.21  Aligned_cols=218  Identities=17%  Similarity=0.085  Sum_probs=157.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.+......  ...   ..++.++++|+.|.+++.++++       ++
T Consensus        13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--~~~---~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~i   87 (263)
T 3ak4_A           13 RKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVV--AGL---ENGGFAVEVDVTKRASVDAAMQKAIDALGGF   87 (263)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--HTC---TTCCEEEECCTTCHHHHHHHHHHHHHHHTCC
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--HHH---hcCCeEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999864332211  111   1267889999999998888776       79


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CC-ccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KS-VKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~-~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |+||||||......    ..+.+...+++|+.++.++++++...   .+ .++||++||...+.+.+.            
T Consensus        88 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------  155 (263)
T 3ak4_A           88 DLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPL------------  155 (263)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTT------------
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCC------------
Confidence            99999999765321    34567788999999999999887542   13 579999999875432111            


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCC----c----hHHHHHHHHhcCCCC
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPT----S----TLLLILAMVKGLRGE  215 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~----~----~~~~~~~~~~~~~~~  215 (305)
                         .      ..|+.||...+.+.+.++.+.   +++++++||+.++++.......    .    ............+  
T Consensus       156 ---~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--  224 (263)
T 3ak4_A          156 ---L------AHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTP--  224 (263)
T ss_dssp             ---C------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCT--
T ss_pred             ---c------hhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCC--
Confidence               1      679999999999999888774   8999999999998874211000    0    0011111111111  


Q ss_pred             CCCCCccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          216 YPNTTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       216 ~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                          ...+++++|+|+++++++..+.   .+..+++.+.
T Consensus       225 ----~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG  259 (263)
T 3ak4_A          225 ----LGRIEEPEDVADVVVFLASDAARFMTGQGINVTGG  259 (263)
T ss_dssp             ----TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             ----CCCCcCHHHHHHHHHHHhCccccCCCCCEEEECcC
Confidence                3568999999999999997643   3456888644

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.93  E-value=6.2e-25  Score=184.67  Aligned_cols=217  Identities=13%  Similarity=0.097  Sum_probs=157.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+|+||||+|+||+++++.|+++|++|+++.|+.++.....  ........++.++.+|+.|.+++.++++       ++
T Consensus        45 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~--~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i  122 (285)
T 2c07_A           45 KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVV--DEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV  122 (285)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHH--HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH--HHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            67999999999999999999999999999888754332211  1111223478899999999998888764       68


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |+|||+||......    ..+.+...+++|+.++.++++.+.    +. +.++||++||...+.+.+.            
T Consensus       123 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~------------  189 (285)
T 2c07_A          123 DILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN-RYGRIINISSIVGLTGNVG------------  189 (285)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-TCEEEEEECCTHHHHCCTT------------
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCEEEEECChhhccCCCC------------
Confidence            99999999865421    345677789999999888887765    34 5689999999876543211            


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                         .      ..|+.+|.+.+.+.+.++.+.   +++++++||+.+.++.....   ............+      ...+
T Consensus       190 ---~------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~------~~~~  251 (285)
T 2c07_A          190 ---Q------ANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI---SEQIKKNIISNIP------AGRM  251 (285)
T ss_dssp             ---C------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C---CHHHHHHHHTTCT------TSSC
T ss_pred             ---C------chHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhc---CHHHHHHHHhhCC------CCCC
Confidence               1      679999999999998888764   89999999999998854321   1112222222211      2458


Q ss_pred             eeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          224 VHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      ++++|+|++++.++..+.   .+..+++++.
T Consensus       252 ~~~~dvA~~~~~l~~~~~~~~~G~~i~v~gG  282 (285)
T 2c07_A          252 GTPEEVANLACFLSSDKSGYINGRVFVIDGG  282 (285)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCHHHHHHHHHHHhCCCcCCCCCCEEEeCCC
Confidence            999999999999997643   3456777654

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.93  E-value=1.3e-24  Score=178.92  Aligned_cols=218  Identities=15%  Similarity=0.099  Sum_probs=162.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.+........  ......++.++++|+.|.+++.++++       ++
T Consensus         6 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~--~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (247)
T 3lyl_A            6 KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENS--MKEKGFKARGLVLNISDIESIQNFFAEIKAENLAI   83 (247)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH--HHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH--HHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            6899999999999999999999999999999987544332221  11123478999999999998888765       57


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      |+||||||......    ..+.+...+++|+.++.++++.+...   .+..+||++||...+.+.+..            
T Consensus        84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------------  151 (247)
T 3lyl_A           84 DILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQ------------  151 (247)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTC------------
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCc------------
Confidence            99999999875432    45567789999999999999886432   145699999998765432211            


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccce
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFV  224 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  224 (305)
                               ..|+.||.+.+.+.+.++.+   .++++.+++|+.+.++......   ...........+      ...+.
T Consensus       152 ---------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~------~~~~~  213 (247)
T 3lyl_A          152 ---------TNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLT---DEQKSFIATKIP------SGQIG  213 (247)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSC---HHHHHHHHTTST------TCCCB
T ss_pred             ---------HHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhcc---HHHHHHHhhcCC------CCCCc
Confidence                     67999999999999988876   4899999999999988643321   111222222222      46689


Q ss_pred             eHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          225 HIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       225 ~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      +++|+|+++.+++.....   +..+++.|.
T Consensus       214 ~~~dva~~i~~l~s~~~~~~tG~~i~vdgG  243 (247)
T 3lyl_A          214 EPKDIAAAVAFLASEEAKYITGQTLHVNGG  243 (247)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CHHHHHHHHHHHhCCCcCCccCCEEEECCC
Confidence            999999999999976443   556888643

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.93  E-value=3e-25  Score=185.85  Aligned_cols=220  Identities=16%  Similarity=0.133  Sum_probs=161.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |++|||||+|+||+++++.|+++|++|++++|+.+.......  .+.....++.++++|+.|.+++.++++       ++
T Consensus        25 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~--~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  102 (279)
T 3sju_A           25 QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVD--GLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPI  102 (279)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--HHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            679999999999999999999999999999998654332211  122224578999999999998887765       68


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHh------cCCccEEEEeccceeeeccCCCCCCcccCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKK------AKSVKRVVLTSSCSSIRYRHDAQQVSPLNES  144 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~------~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~  144 (305)
                      |++|||||......    ..+.+...+++|+.++.++++++..      . +..+||++||...+.+.+..         
T Consensus       103 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~-~~g~iV~isS~~~~~~~~~~---------  172 (279)
T 3sju_A          103 GILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREA-GWGRIVNIASTGGKQGVMYA---------  172 (279)
T ss_dssp             CEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHH-TCEEEEEECCGGGTSCCTTC---------
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhc-CCcEEEEECChhhccCCCCC---------
Confidence            99999999876432    3455677889999999999998754      3 55799999998765432211         


Q ss_pred             CCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCC--------CCCchHHHHHHHHhcCC
Q 039049          145 HWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAP--------QPTSTLLLILAMVKGLR  213 (305)
Q Consensus       145 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~--------~~~~~~~~~~~~~~~~~  213 (305)
                                  ..|+.||.+.+.+.+.++.+   .++++.+++|+.+.++....        ................+
T Consensus       173 ------------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  240 (279)
T 3sju_A          173 ------------APYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIP  240 (279)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCT
T ss_pred             ------------hhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCC
Confidence                        67999999999999998877   48999999999998763210        00011112222222211


Q ss_pred             CCCCCCCccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          214 GEYPNTTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       214 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                            ...+.+++|+|+++++++....   .+..+++.|.
T Consensus       241 ------~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG  275 (279)
T 3sju_A          241 ------LGRYSTPEEVAGLVGYLVTDAAASITAQALNVCGG  275 (279)
T ss_dssp             ------TSSCBCHHHHHHHHHHHTSSGGGGCCSCEEEESTT
T ss_pred             ------CCCCCCHHHHHHHHHHHhCccccCcCCcEEEECCC
Confidence                  4567899999999999997653   3556788654

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.93  E-value=6.4e-25  Score=182.47  Aligned_cols=205  Identities=19%  Similarity=0.207  Sum_probs=154.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|++.|++|++++|+.+.....        ...++.++++|+.|.+++.++++       ++
T Consensus        17 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   88 (266)
T 3p19_A           17 KLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL--------NLPNTLCAQVDVTDKYTFDTAITRAEKIYGPA   88 (266)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTT--------CCTTEEEEECCTTCHHHHHHHHHHHHHHHCSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHh--------hcCCceEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence            5799999999999999999999999999999986533221        12268899999999988888775       78


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |++|||||......    ..+.+...+++|+.++.++++++.    +. +.++||++||...+.+.+..           
T Consensus        89 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~IV~isS~~~~~~~~~~-----------  156 (266)
T 3p19_A           89 DAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKAR-NCGTIINISSIAGKKTFPDH-----------  156 (266)
T ss_dssp             EEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCCTTC-----------
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcChhhCCCCCCC-----------
Confidence            99999999875432    345667789999999999777763    44 56799999998765432211           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchH-HHHHHHHhcCCCCCCCCCcc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTL-LLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  222 (305)
                                ..|+.||...+.+.+.++.+   .|+++++++||.+.++.......... ..+....  .+      ...
T Consensus       157 ----------~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~~------~~r  218 (266)
T 3p19_A          157 ----------AAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWR--VD------MGG  218 (266)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHH--HH------TTC
T ss_pred             ----------chHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhhc--cc------ccC
Confidence                      67999999999999988877   48999999999999886433221111 1111100  01      345


Q ss_pred             ceeHHHHHHHHHHhhcccccCc
Q 039049          223 FVHIDDVVGAHILAMEETRASG  244 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~~~~  244 (305)
                      +++++|+|++++++++++....
T Consensus       219 ~~~pedvA~av~~l~~~~~~~~  240 (266)
T 3p19_A          219 VLAADDVARAVLFAYQQPQNVC  240 (266)
T ss_dssp             CBCHHHHHHHHHHHHHSCTTEE
T ss_pred             CCCHHHHHHHHHHHHcCCCCcc
Confidence            7999999999999999876533

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.93  E-value=4.6e-25  Score=181.86  Aligned_cols=210  Identities=17%  Similarity=0.170  Sum_probs=150.7

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcC--CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc------
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKG--HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ------   72 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   72 (305)
                      +++|+||||+|+||+++++.|+++|  ++|++++|+.......   ...  ...++.++.+|+.|.+++.++++      
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l---~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATEL---KSI--KDSRVHVLPLTVTCDKSLDTFVSKVGEIV   77 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHH---HTC--CCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHH---Hhc--cCCceEEEEeecCCHHHHHHHHHHHHHhc
Confidence            3689999999999999999999999  9999999986644322   222  24478999999999998888776      


Q ss_pred             ---CCCEEEEeccccc-cC----CCCchhhhhhhhhHHHHHHHHHHHHhc---C------C-----ccEEEEeccceeee
Q 039049           73 ---GVDGVFHTASPVL-VP----YDNNIQATLIDPCIKGTLNVLSSCKKA---K------S-----VKRVVLTSSCSSIR  130 (305)
Q Consensus        73 ---~~d~Vi~~a~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~------~-----~~~~v~~SS~~~~~  130 (305)
                         ++|+||||||... ..    ...+.+...+++|+.++.++++++...   .      +     .++||++||...+.
T Consensus        78 g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~  157 (250)
T 1yo6_A           78 GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSI  157 (250)
T ss_dssp             GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCS
T ss_pred             CCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCcccc
Confidence               7999999999876 22    234566778999999999999887543   1      2     57999999987654


Q ss_pred             ccCCCCCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHH
Q 039049          131 YRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILA  207 (305)
Q Consensus       131 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~  207 (305)
                      +..        .+..+..+.      ..|+.+|.+.+.+++.++.++   +++++++||+.+.++....           
T Consensus       158 ~~~--------~~~~~~~~~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------  212 (250)
T 1yo6_A          158 TDN--------TSGSAQFPV------LAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK-----------  212 (250)
T ss_dssp             TTC--------CSTTSSSCB------HHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC------------------
T ss_pred             CCc--------ccccccCCc------cHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC-----------
Confidence            321        111111222      679999999999999988775   8999999999998764211           


Q ss_pred             HHhcCCCCCCCCCccceeHHHHHHHHHHhhccccc--CceEE-EecCCc
Q 039049          208 MVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRA--SGRLI-CSSSVA  253 (305)
Q Consensus       208 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~~~~-~~~~~~  253 (305)
                                   ..+++++|+|+.++.++.....  .+.|. +.++.+
T Consensus       213 -------------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~~  248 (250)
T 1yo6_A          213 -------------NAALTVEQSTAELISSFNKLDNSHNGRFFMRNLKPY  248 (250)
T ss_dssp             -------------------HHHHHHHHHHHTTCCGGGTTCEEETTEEEC
T ss_pred             -------------CCCCCHHHHHHHHHHHHhcccccCCCeEEEECCcCC
Confidence                         1358899999999999987542  44444 444433

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.93  E-value=4.2e-25  Score=184.31  Aligned_cols=218  Identities=15%  Similarity=0.097  Sum_probs=160.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc------CCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ------GVD   75 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------~~d   75 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.......   ........++.++++|+.|.+++.++.+      ++|
T Consensus        32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD  108 (273)
T 3uf0_A           32 RTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVA---DEIADGGGSAEAVVADLADLEGAANVAEELAATRRVD  108 (273)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHH---HHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHH---HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCc
Confidence            6799999999999999999999999999999764322111   1222234578999999999988777654      789


Q ss_pred             EEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           76 GVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        76 ~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      ++|||||......    ..+.+...+++|+.++.++++++.    +. +..+||++||...+.+.+..            
T Consensus       109 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~IV~isS~~~~~~~~~~------------  175 (273)
T 3uf0_A          109 VLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAH-GSGRIVTIASMLSFQGGRNV------------  175 (273)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCSSC------------
T ss_pred             EEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEEcchHhcCCCCCC------------
Confidence            9999999876532    455677899999999999999873    34 56799999998765432211            


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccce
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFV  224 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  224 (305)
                               ..|+.||.+.+.+.+.++.+   .|+++.+++|+.+.++....... ............+      ...+.
T Consensus       176 ---------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p------~~r~~  239 (273)
T 3uf0_A          176 ---------AAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRA-DDERAAEITARIP------AGRWA  239 (273)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHT-SHHHHHHHHHHST------TSSCB
T ss_pred             ---------hhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhccc-CHHHHHHHHhcCC------CCCCC
Confidence                     67999999999999999877   58999999999999875321100 1112222222222      35678


Q ss_pred             eHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          225 HIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       225 ~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      +++|+|+++++++....   .+..+++.|.
T Consensus       240 ~pedva~~v~~L~s~~a~~itG~~i~vdGG  269 (273)
T 3uf0_A          240 TPEDMVGPAVFLASDAASYVHGQVLAVDGG  269 (273)
T ss_dssp             CGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CHHHHHHHHHHHhCchhcCCcCCEEEECcC
Confidence            99999999999998643   3556788654

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.93  E-value=5e-25  Score=181.59  Aligned_cols=216  Identities=13%  Similarity=0.106  Sum_probs=152.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCC-CcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDP-EDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |+++||||+|+||+++++.|+++|++|++++|++ +....  .+..   ...++.++++|+.|.+++.++++       +
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~--~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (249)
T 2ew8_A            8 KLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA--AIRN---LGRRVLTVKCDVSQPGDVEAFGKQVISTFGR   82 (249)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH--HHHH---TTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH--HHHh---cCCcEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            5799999999999999999999999999999987 32221  1111   13478899999999998887753       7


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|+||||||......    ..+.+...+++|+.++.++.+++    ++. +.++||++||...+.+.+.           
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~-----------  150 (249)
T 2ew8_A           83 CDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN-GWGRIINLTSTTYWLKIEA-----------  150 (249)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGGSCCSS-----------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCeEEEEEcchhhccCCCC-----------
Confidence            899999999765421    34567778999999988888874    445 5689999999876543211           


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                          .      ..|+.||...+.+.+.++.+.   ++++++++|+.+.++.........   .......  ..  .....
T Consensus       151 ----~------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~--~~--~~~~~  213 (249)
T 2ew8_A          151 ----Y------THYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSA---MFDVLPN--ML--QAIPR  213 (249)
T ss_dssp             ----C------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC---------------------C--TT--SSSCS
T ss_pred             ----c------hhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccc---hhhHHHH--hh--CccCC
Confidence                1      679999999999999988764   899999999999987532110000   0000000  10  11345


Q ss_pred             ceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          223 FVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      +.+++|+|+++++++....   .+..+++.|.
T Consensus       214 ~~~p~dva~~~~~l~s~~~~~~tG~~~~vdGG  245 (249)
T 2ew8_A          214 LQVPLDLTGAAAFLASDDASFITGQTLAVDGG  245 (249)
T ss_dssp             CCCTHHHHHHHHHHTSGGGTTCCSCEEEESSS
T ss_pred             CCCHHHHHHHHHHHcCcccCCCCCcEEEECCC
Confidence            8999999999999997543   2445777554

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.93  E-value=5.4e-25  Score=185.55  Aligned_cols=225  Identities=17%  Similarity=0.109  Sum_probs=159.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc---CCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ---GVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~Vi   78 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+..+......     ....++.++++|+.|.+++.++++   ++|+||
T Consensus        17 k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv   91 (291)
T 3rd5_A           17 RTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAAR-----TMAGQVEVRELDLQDLSSVRRFADGVSGADVLI   91 (291)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT-----TSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEE
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----HhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEE
Confidence            679999999999999999999999999999998654332211     113478999999999999999887   569999


Q ss_pred             EeccccccCC--CCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccc
Q 039049           79 HTASPVLVPY--DNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYN  156 (305)
Q Consensus        79 ~~a~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  156 (305)
                      ||||...+..  ..+.+...+++|+.++.++++++... ..++||++||...+.+....  .....+..+..+.      
T Consensus        92 ~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~-~~~riv~isS~~~~~~~~~~--~~~~~~~~~~~~~------  162 (291)
T 3rd5_A           92 NNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPR-LTDRVVTVSSMAHWPGRINL--EDLNWRSRRYSPW------  162 (291)
T ss_dssp             ECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGG-EEEEEEEECCGGGTTCCCCS--SCTTCSSSCCCHH------
T ss_pred             ECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHhheeEeechhhccCCCCc--ccccccccCCCCc------
Confidence            9999876432  45667789999999999999999888 67899999998866543211  0111122222222      


Q ss_pred             hhHHHHHHHHHHHHHHHHHHc---C--CcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHH
Q 039049          157 LWYAYAKTIAEKEAWRIAKDC---G--IDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVG  231 (305)
Q Consensus       157 ~~Y~~sK~~~E~~~~~~~~~~---~--~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  231 (305)
                      ..|+.||.+.+.+.+.++.++   +  ++++.++||.+..+..........    ......+     ..+-..+++|+|+
T Consensus       163 ~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~----~~~~~~~-----~~~~~~~~~~~A~  233 (291)
T 3rd5_A          163 LAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLG----DALMSAA-----TRVVATDADFGAR  233 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-----------------------------CHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHH----HHHHHHH-----HHHHhCCHHHHHH
Confidence            679999999999998887765   4  999999999998875432111110    0000000     0233456999999


Q ss_pred             HHHHhhcccccCce-EEEe
Q 039049          232 AHILAMEETRASGR-LICS  249 (305)
Q Consensus       232 ~~~~~~~~~~~~~~-~~~~  249 (305)
                      ++++++..+...|. +++.
T Consensus       234 ~~~~l~~~~~~~G~~~~vd  252 (291)
T 3rd5_A          234 QTLYAASQDLPGDSFVGPR  252 (291)
T ss_dssp             HHHHHHHSCCCTTCEEEET
T ss_pred             HHHHHHcCCCCCCceeCCc
Confidence            99999988655555 4453

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.93  E-value=1.2e-24  Score=179.74  Aligned_cols=212  Identities=17%  Similarity=0.139  Sum_probs=154.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.+......  ...   ..++.++++|+.|.+++.++++       ++
T Consensus         6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (254)
T 1hdc_A            6 KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATA--REL---GDAARYQHLDVTIEEDWQRVVAYAREEFGSV   80 (254)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--HTT---GGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--HHh---CCceeEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999865332211  111   2368899999999998888776       79


Q ss_pred             CEEEEeccccccC----CCCchhhhhhhhhHHHHHHHHHH----HHhcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVP----YDNNIQATLIDPCIKGTLNVLSS----CKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |++|||||.....    ...+.+...+++|+.++.++.+.    +++. +.++||++||...+.+.+.            
T Consensus        81 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~------------  147 (254)
T 1hdc_A           81 DGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA-GGGSIVNISSAAGLMGLAL------------  147 (254)
T ss_dssp             CEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCTT------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEECchhhccCCCC------------
Confidence            9999999976532    13456778899999999855554    4455 5689999999876543211            


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCC-CC-CCc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEY-PN-TTV  221 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~  221 (305)
                         .      ..|+.||...+.+.+.++.+.   +++++++||+.++++...           .........+ .. ...
T Consensus       148 ---~------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-----------~~~~~~~~~~~~~~p~~  207 (254)
T 1hdc_A          148 ---T------SSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTA-----------ETGIRQGEGNYPNTPMG  207 (254)
T ss_dssp             ---C------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-----------HHTCCCSTTSCTTSTTS
T ss_pred             ---c------hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCcccc-----------ccchhHHHHHHhcCCCC
Confidence               1      679999999999999888764   899999999999886311           1100000001 11 123


Q ss_pred             cce-eHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          222 GFV-HIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       222 ~~i-~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      .+. +++|+|+++++++..+.   .+..+++.|.
T Consensus       208 ~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG  241 (254)
T 1hdc_A          208 RVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGG  241 (254)
T ss_dssp             SCB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCCHHHHHHHHHHHhCchhcCCCCCEEEECCC
Confidence            467 99999999999997643   2445777654

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.93  E-value=2.3e-25  Score=183.91  Aligned_cols=217  Identities=13%  Similarity=0.110  Sum_probs=155.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+|+||||+|+||+++++.|+++|++|++++|+.+.......  ... ...++.++++|+.|.+++.++++       ++
T Consensus         7 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~--~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (251)
T 1zk4_A            7 KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAK--SVG-TPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HHC-CTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             cEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--Hhh-ccCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999998643322111  111 11478999999999998888775       48


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHH----HhcCCc-cEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSC----KKAKSV-KRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      |+||||||......    ..+.+...+++|+.++.++.+.+    ++. +. ++||++||...+.+.+.           
T Consensus        84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~~~~iv~isS~~~~~~~~~-----------  151 (251)
T 1zk4_A           84 STLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNK-GLGASIINMSSIEGFVGDPS-----------  151 (251)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS-SSCEEEEEECCGGGTSCCTT-----------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-CCCCEEEEeCCchhccCCCC-----------
Confidence            99999999765321    34456778999999887776665    344 55 79999999876543211           


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHH-----HcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCC
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAK-----DCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTT  220 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (305)
                          .      ..|+.+|.+.|.+.+.++.     ..+++++++||+.++++..... .. . ..... ...    ....
T Consensus       152 ----~------~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~-~~-~-~~~~~-~~~----~~~~  213 (251)
T 1zk4_A          152 ----L------GAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL-PG-A-EEAMS-QRT----KTPM  213 (251)
T ss_dssp             ----C------HHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS-TT-H-HHHHT-STT----TCTT
T ss_pred             ----C------ccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhc-Cc-h-hhhHH-Hhh----cCCC
Confidence                1      6799999999999888765     3579999999999998753221 11 1 00110 000    1113


Q ss_pred             ccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          221 VGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       221 ~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      ..+++++|+|+++++++..+.   .+..+++++.
T Consensus       214 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  247 (251)
T 1zk4_A          214 GHIGEPNDIAYICVYLASNESKFATGSEFVVDGG  247 (251)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCcCHHHHHHHHHHHcCcccccccCcEEEECCC
Confidence            568999999999999997643   2456777654

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.93  E-value=1.1e-24  Score=181.32  Aligned_cols=219  Identities=13%  Similarity=0.049  Sum_probs=159.1

Q ss_pred             CcEEEeCCc--chHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            2 PEYCVTGGT--GFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~~--G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      |+++||||+  |+||+++++.|+++|++|++++|+.........+...   .++..++++|+.|.+++.++++       
T Consensus        10 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T 1qsg_A           10 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQ---LGSDIVLQCDVAEDASIDTMFAELGKVWP   86 (265)
T ss_dssp             CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHH---TTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHh---cCCcEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            469999999  9999999999999999999999987222222222111   1234788999999998888775       


Q ss_pred             CCCEEEEecccccc----C-----CCCchhhhhhhhhHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCCCcccC
Q 039049           73 GVDGVFHTASPVLV----P-----YDNNIQATLIDPCIKGTLNVLSSCKKAK-SVKRVVLTSSCSSIRYRHDAQQVSPLN  142 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~----~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~  142 (305)
                      ++|+||||||....    .     ...+.+...+++|+.++.++++++...- ...+||++||...+.+.+.        
T Consensus        87 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~--------  158 (265)
T 1qsg_A           87 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPN--------  158 (265)
T ss_dssp             SEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT--------
T ss_pred             CCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCCC--------
Confidence            67999999997652    1     2445677899999999999999987641 1258999999765433211        


Q ss_pred             CCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCC
Q 039049          143 ESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNT  219 (305)
Q Consensus       143 E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (305)
                             .      ..|+.||...+.+.+.++.++   ++++++++|+.++++..... ............+.+      
T Consensus       159 -------~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~p------  218 (265)
T 1qsg_A          159 -------Y------NVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI-KDFRKMLAHCEAVTP------  218 (265)
T ss_dssp             -------T------THHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGS-TTHHHHHHHHHHHST------
T ss_pred             -------c------hHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcc-cccHHHHHHHHhcCC------
Confidence                   1      569999999999999988775   89999999999999864321 111222223322222      


Q ss_pred             CccceeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          220 TVGFVHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       220 ~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      ...+.+++|+|+++++++.....   +..+++.+.
T Consensus       219 ~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG  253 (265)
T 1qsg_A          219 IRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGG  253 (265)
T ss_dssp             TSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CCCCCCHHHHHHHHHHHhCchhcCccCCEEEECCC
Confidence            23578999999999999976432   456788644

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.93  E-value=1.6e-24  Score=178.45  Aligned_cols=214  Identities=14%  Similarity=0.121  Sum_probs=161.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|+++.|+.+........  .   ..++..+++|+.|.+++.++++       ++
T Consensus        10 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~--~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   84 (248)
T 3op4_A           10 KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDY--L---GDNGKGMALNVTNPESIEAVLKAITDEFGGV   84 (248)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH--H---GGGEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH--h---cccceEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            5799999999999999999999999999999986543322111  1   2257889999999998888776       78


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKK----AKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |++|||||......    ..+.+...+++|+.++.++++++..    . +..+||++||...+.+.+..           
T Consensus        85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~~~~~~-----------  152 (248)
T 3op4_A           85 DILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKK-RQGRIINVGSVVGTMGNAGQ-----------  152 (248)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHHCCTTC-----------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEEcchhhcCCCCCC-----------
Confidence            99999999876432    4556778999999999999998743    3 55799999998765443211           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                                ..|+.||...+.+.+.++.++   +++++.++|+.+..+......   ...........+      ...+
T Consensus       153 ----------~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~~p------~~r~  213 (248)
T 3op4_A          153 ----------ANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALN---DEQRTATLAQVP------AGRL  213 (248)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSC---HHHHHHHHHTCT------TCSC
T ss_pred             ----------hHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcC---HHHHHHHHhcCC------CCCC
Confidence                      679999999999999888764   899999999999887643221   112222222222      4568


Q ss_pred             eeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          224 VHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      .+++|+|+++.+++.....   +..+++.|.
T Consensus       214 ~~p~dva~~v~~L~s~~~~~itG~~i~vdgG  244 (248)
T 3op4_A          214 GDPREIASAVAFLASPEAAYITGETLHVNGG  244 (248)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHHcCCccCCccCcEEEECCC
Confidence            8999999999999976443   456777654

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.93  E-value=1.9e-24  Score=179.52  Aligned_cols=210  Identities=14%  Similarity=0.078  Sum_probs=155.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.+.             ..++.++++|+.|.+++.++++       ++
T Consensus         9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   75 (264)
T 2dtx_A            9 KVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-------------EAKYDHIECDVTNPDQVKASIDHIFKEYGSI   75 (264)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-------------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-------------CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            679999999999999999999999999999998653             1267889999999998888775       68


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      |+||||||......    ..+.+...+++|+.++.++++++...   .+.++||++||...+.+.+.             
T Consensus        76 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------  142 (264)
T 2dtx_A           76 SVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKN-------------  142 (264)
T ss_dssp             CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTT-------------
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCC-------------
Confidence            99999999765432    34567789999999999998887542   15679999999876443211             


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHHcC--CcEEEEecCceecCCCCCCC-----CchH---HHHHHHHhcCCCCCC
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKDCG--IDMVVVNPSFVVGPLLAPQP-----TSTL---LLILAMVKGLRGEYP  217 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~i~Rp~~v~G~~~~~~~-----~~~~---~~~~~~~~~~~~~~~  217 (305)
                        .      ..|+.||...+.+.+.++.+++  +++++++|+.+.++......     ....   ..........+    
T Consensus       143 --~------~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----  210 (264)
T 2dtx_A          143 --A------SAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHP----  210 (264)
T ss_dssp             --B------HHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHST----
T ss_pred             --c------hhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCC----
Confidence              1      6799999999999999987765  99999999999776321000     0000   11111111111    


Q ss_pred             CCCccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          218 NTTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       218 ~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                        ...+++++|+|+++++++..+.   .+..+++.|.
T Consensus       211 --~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  245 (264)
T 2dtx_A          211 --MQRIGKPQEVASAVAFLASREASFITGTCLYVDGG  245 (264)
T ss_dssp             --TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             --CCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCC
Confidence              3458999999999999997643   2445777654

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.93  E-value=2.4e-25  Score=183.97  Aligned_cols=215  Identities=17%  Similarity=0.168  Sum_probs=136.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||++++++|+++|++|++++|+.+........  ......++.++++|+.|.+++.++++       ++
T Consensus        10 k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (253)
T 3qiv_A           10 KVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQ--IVADGGTAISVAVDVSDPESAKAMADRTLAEFGGI   87 (253)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH--HHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH--HHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            6799999999999999999999999999999986543332211  11223478899999999998888775       78


Q ss_pred             CEEEEeccccc---c----CCCCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCC
Q 039049           75 DGVFHTASPVL---V----PYDNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNE  143 (305)
Q Consensus        75 d~Vi~~a~~~~---~----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E  143 (305)
                      |+||||||...   .    ....+.+...+++|+.++.++.+.+    ++. +..+||++||...+...           
T Consensus        88 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~-----------  155 (253)
T 3qiv_A           88 DYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKR-GGGAIVNQSSTAAWLYS-----------  155 (253)
T ss_dssp             CEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEEEEECC------------------
T ss_pred             CEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCCEEEEECCccccCCC-----------
Confidence            99999999742   1    1145566789999999977666665    444 56799999998865221           


Q ss_pred             CCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCC
Q 039049          144 SHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTT  220 (305)
Q Consensus       144 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (305)
                                   ..|+.||.+.+.+.+.++.++   ++++++++|+.++++.......  .........+.+      .
T Consensus       156 -------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~------~  214 (253)
T 3qiv_A          156 -------------NYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTP--KEMVDDIVKGLP------L  214 (253)
T ss_dssp             -----------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC----------------------------------
T ss_pred             -------------chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCc--HHHHHHHhccCC------C
Confidence                         559999999999999998886   7999999999999885432111  111111211111      3


Q ss_pred             ccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          221 VGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       221 ~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      ..+.+++|+|+++++++....   .+..|++++.
T Consensus       215 ~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG  248 (253)
T 3qiv_A          215 SRMGTPDDLVGMCLFLLSDEASWITGQIFNVDGG  248 (253)
T ss_dssp             -----CCHHHHHHHHHHSGGGTTCCSCEEEC---
T ss_pred             CCCCCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence            456789999999999997654   3556888643

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.93  E-value=4.9e-25  Score=183.02  Aligned_cols=220  Identities=13%  Similarity=0.051  Sum_probs=156.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEe-CCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVR-DPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |+|+||||+|+||+++++.|+++|++|++++| +.+......  ........++.++++|+.|.+++.++++       +
T Consensus         8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~--~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (261)
T 1gee_A            8 KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVL--EEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH--HHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHH--HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            67999999999999999999999999999999 543222111  1111113468899999999998888775       7


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CC-ccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KS-VKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~-~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|+||||||......    ..+.+...+++|+.++.++++++...   .+ .++||++||...+.+.+            
T Consensus        86 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------  153 (261)
T 1gee_A           86 LDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWP------------  153 (261)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCT------------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCC------------
Confidence            899999999765421    34566778999999999988876542   13 57999999976533211            


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                         +.      ..|+.+|.+.+.+.+.++.+.   +++++++||+.++++...... .............+      ...
T Consensus       154 ---~~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~------~~~  217 (261)
T 1gee_A          154 ---LF------VHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKF-ADPEQRADVESMIP------MGY  217 (261)
T ss_dssp             ---TC------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHH-HSHHHHHHHHTTCT------TSS
T ss_pred             ---Cc------cHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcc-cChhHHHHHHhcCC------CCC
Confidence               11      679999999999998887764   899999999999998532100 00111122221111      345


Q ss_pred             ceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          223 FVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      +++++|+|++++.++....   .+..+++.+.
T Consensus       218 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  249 (261)
T 1gee_A          218 IGEPEEIAAVAAWLASSEASYVTGITLFADGG  249 (261)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHhCccccCCCCcEEEEcCC
Confidence            8999999999999987542   2446777654

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.93  E-value=1.7e-24  Score=178.13  Aligned_cols=217  Identities=16%  Similarity=0.149  Sum_probs=156.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEe-CCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVR-DPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |+++||||+|+||+++++.|+++|++|+++.| +.+......  ........++.++++|+.|++++.++++       +
T Consensus         5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (246)
T 2uvd_A            5 KVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVV--DEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQ   82 (246)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH--HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH--HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999999 443222211  1111113468899999999998888775       7


Q ss_pred             CCEEEEeccccccC----CCCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVP----YDNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|++|||||.....    ...+.+...+++|+.++.++.+++.    +. +.++||++||...+.+.+.           
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~-----------  150 (246)
T 2uvd_A           83 VDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQ-RHGRIVNIASVVGVTGNPG-----------  150 (246)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCTHHHHCCTT-----------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECCHHhcCCCCC-----------
Confidence            89999999976542    1345677889999999877777654    34 5689999999875443211           


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                          .      ..|+.||...+.+.+.++.+   .++++++++|+.+.++........   .........+      ...
T Consensus       151 ----~------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~---~~~~~~~~~p------~~~  211 (246)
T 2uvd_A          151 ----Q------ANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDEN---IKAEMLKLIP------AAQ  211 (246)
T ss_dssp             ----B------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTT---HHHHHHHTCT------TCS
T ss_pred             ----C------chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHH---HHHHHHhcCC------CCC
Confidence                1      67999999999998888765   489999999999988764321111   1112222211      345


Q ss_pred             ceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          223 FVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      +++++|+|+++++++..+.   .+..+++.|.
T Consensus       212 ~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG  243 (246)
T 2uvd_A          212 FGEAQDIANAVTFFASDQSKYITGQTLNVDGG  243 (246)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHcCchhcCCCCCEEEECcC
Confidence            8999999999999997543   2445777543

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.93  E-value=1.2e-24  Score=181.20  Aligned_cols=221  Identities=15%  Similarity=0.157  Sum_probs=156.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchh-hhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVG-FLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.++..... .+... ....++.++++|+.|.+++.++++       +
T Consensus        14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   92 (267)
T 1iy8_A           14 RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLET-APDAEVLTTVADVSDEAQVEAYVTATTERFGR   92 (267)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-CTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh-cCCceEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            67999999999999999999999999999999865433221 11111 013468899999999998888775       6


Q ss_pred             CCEEEEecccccc-C----CCCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCC
Q 039049           74 VDGVFHTASPVLV-P----YDNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNES  144 (305)
Q Consensus        74 ~d~Vi~~a~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~  144 (305)
                      +|+||||||.... .    ...+.+...+++|+.++.++.+.+    ++. +.++||++||...+.+.+.          
T Consensus        93 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~----------  161 (267)
T 1iy8_A           93 IDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ-GSGMVVNTASVGGIRGIGN----------  161 (267)
T ss_dssp             CSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSBCSS----------
T ss_pred             CCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEEcchhhccCCCC----------
Confidence            8999999997643 1    134567788999999988776655    344 5689999999875433211          


Q ss_pred             CCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCC-----CCCchHHHHHHHHhcCCCCC
Q 039049          145 HWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAP-----QPTSTLLLILAMVKGLRGEY  216 (305)
Q Consensus       145 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~-----~~~~~~~~~~~~~~~~~~~~  216 (305)
                           .      ..|+.||...+.+.+.++.+   .++++++++|+.++++....     ................+   
T Consensus       162 -----~------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p---  227 (267)
T 1iy8_A          162 -----Q------SGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNP---  227 (267)
T ss_dssp             -----B------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCT---
T ss_pred             -----C------ccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCC---
Confidence                 1      67999999999999888766   48999999999998874211     00000000011111111   


Q ss_pred             CCCCccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          217 PNTTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       217 ~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                         ...+.+++|+|+++++++..+.   .+..+++.|.
T Consensus       228 ---~~r~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdGG  262 (267)
T 1iy8_A          228 ---SKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGG  262 (267)
T ss_dssp             ---TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             ---CCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence               3457899999999999997643   3445777543

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.93  E-value=5.9e-25  Score=183.99  Aligned_cols=224  Identities=14%  Similarity=0.062  Sum_probs=163.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|++.|++|++++|+.+.......  .......++.++++|+.|.+++.++++       ++
T Consensus         9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   86 (280)
T 3tox_A            9 KIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTD--EIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGL   86 (280)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHH--HHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--HHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            579999999999999999999999999999998654332221  122234578899999999998888775       78


Q ss_pred             CEEEEecccccc-----CCCCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceee-eccCCCCCCcccCCCC
Q 039049           75 DGVFHTASPVLV-----PYDNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSI-RYRHDAQQVSPLNESH  145 (305)
Q Consensus        75 d~Vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~-~~~~~~~~~~~~~E~~  145 (305)
                      |++|||||....     ....+.+...+++|+.++.++++++...   .+..++|++||...+ .+.+.           
T Consensus        87 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----------  155 (280)
T 3tox_A           87 DTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAG-----------  155 (280)
T ss_dssp             CEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTT-----------
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCC-----------
Confidence            999999997633     1245667889999999999999987432   145699999997754 21111           


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCC-CchHHHHHHHHhcCCCCCCCCCc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQP-TSTLLLILAMVKGLRGEYPNTTV  221 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  221 (305)
                          .      ..|+.||.+.+.+.+.++.++   ++++.+++||.+.++...... ..............+      ..
T Consensus       156 ----~------~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p------~~  219 (280)
T 3tox_A          156 ----V------APYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHA------LK  219 (280)
T ss_dssp             ----C------HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTST------TS
T ss_pred             ----c------hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCc------cC
Confidence                1      679999999999999988775   899999999999998643211 011112222222222      35


Q ss_pred             cceeHHHHHHHHHHhhccccc---CceEEEecC-CcC
Q 039049          222 GFVHIDDVVGAHILAMEETRA---SGRLICSSS-VAH  254 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~-~~s  254 (305)
                      .+.+++|+|+++++++.....   +..+++.|. .++
T Consensus       220 r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~  256 (280)
T 3tox_A          220 RIARPEEIAEAALYLASDGASFVTGAALLADGGASVT  256 (280)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             CCcCHHHHHHHHHHHhCccccCCcCcEEEECCCcccc
Confidence            688999999999999986542   556888643 443

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.93  E-value=5.5e-25  Score=183.08  Aligned_cols=225  Identities=19%  Similarity=0.202  Sum_probs=160.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccc-hhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSK-VGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |+|+||||+|+||+++++.|+++|++|++++|+..+... ...+...  ...++.++++|+.|.+++.++++       .
T Consensus        15 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   92 (265)
T 1h5q_A           15 KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKE--FGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   92 (265)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHH--HTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHh--cCCeeEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            579999999999999999999999999999997654322 1111111  13468899999999988887765       4


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA----KSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|+|||+||......    ..+.+...+++|+.++.++++++...    +..++||++||..++.+...     .   ..
T Consensus        93 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-----~---~~  164 (265)
T 1h5q_A           93 ISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS-----S---LN  164 (265)
T ss_dssp             EEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE-----E---TT
T ss_pred             CCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccc-----c---cc
Confidence            899999999865432    34566778999999999999987543    12478999999876443210     0   01


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                      +..+.      ..|+.+|.+.|.+++.++.+.   +++++++||+.++++.....   ............+      ...
T Consensus       165 ~~~~~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~------~~~  229 (265)
T 1h5q_A          165 GSLTQ------VFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM---DKKIRDHQASNIP------LNR  229 (265)
T ss_dssp             EECSC------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS---CHHHHHHHHHTCT------TSS
T ss_pred             ccccc------cccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccccc---chhHHHHHHhcCc------ccC
Confidence            11112      679999999999999888764   89999999999998864321   1111222222221      345


Q ss_pred             ceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          223 FVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      +++++|+|+++++++..+.   .+..+++.+.
T Consensus       230 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  261 (265)
T 1h5q_A          230 FAQPEEMTGQAILLLSDHATYMTGGEYFIDGG  261 (265)
T ss_dssp             CBCGGGGHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred             CCCHHHHHHHHHhhccCchhcCcCcEEEecCC
Confidence            8899999999999997643   3556888654

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.93  E-value=1e-24  Score=179.49  Aligned_cols=216  Identities=14%  Similarity=0.092  Sum_probs=156.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHh---cCCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAI---QGVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~---~~~d~Vi   78 (305)
                      |+++||||+|+||+++++.|+++|++|++++|++++.....   .    ..++.++++|+.|++++.++.   .++|+||
T Consensus         7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~----~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv   79 (246)
T 2ag5_A            7 KVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE---K----YPGIQTRVLDVTKKKQIDQFANEVERLDVLF   79 (246)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG---G----STTEEEEECCTTCHHHHHHHHHHCSCCSEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH---h----ccCceEEEeeCCCHHHHHHHHHHhCCCCEEE
Confidence            67999999999999999999999999999999865332211   1    126889999999999888765   4789999


Q ss_pred             EeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcc
Q 039049           79 HTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKK----AKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPD  150 (305)
Q Consensus        79 ~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~  150 (305)
                      ||||......    ..+.+...+++|+.++.++++++..    . +.++||++||...+.+.+              .+.
T Consensus        80 ~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~--------------~~~  144 (246)
T 2ag5_A           80 NVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ-KSGNIINMSSVASSVKGV--------------VNR  144 (246)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCSBTTTBCC--------------TTB
T ss_pred             ECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEechHhCcCCC--------------CCC
Confidence            9999765432    3456677899999999999988753    3 567999999976543211              011


Q ss_pred             cccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCC---CchHHHHHHHHhcCCCCCCCCCccce
Q 039049          151 YCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQP---TSTLLLILAMVKGLRGEYPNTTVGFV  224 (305)
Q Consensus       151 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i  224 (305)
                            ..|+.+|...+.+.+.++.+.   +++++++||+.++++......   ..............+      ...+.
T Consensus       145 ------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~  212 (246)
T 2ag5_A          145 ------CVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQK------TGRFA  212 (246)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCT------TSSCE
T ss_pred             ------ccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCC------CCCCC
Confidence                  679999999999999988764   899999999999997421100   000111122222111      23578


Q ss_pred             eHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          225 HIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       225 ~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      +++|+|+++++++..+.   .+..+++.|.
T Consensus       213 ~~~dvA~~v~~l~s~~~~~~tG~~i~vdgG  242 (246)
T 2ag5_A          213 TAEEIAMLCVYLASDESAYVTGNPVIIDGG  242 (246)
T ss_dssp             EHHHHHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred             CHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            99999999999997643   2445777544

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.93  E-value=9.1e-25  Score=181.22  Aligned_cols=220  Identities=15%  Similarity=0.134  Sum_probs=155.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCc-ccchhhhhhccCc-cCceEEEEccCCCcchHHHHhc-------
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPED-LSKVGFLWELNGA-EERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      |+++||||+|+||+++++.|++.|++|++++|+.+. ......  ..... ..++.++++|+.|.+++.++++       
T Consensus         5 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   82 (260)
T 1x1t_A            5 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRA--GLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHH--HHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHH--HHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            679999999999999999999999999999998654 222111  11110 2368889999999998888775       


Q ss_pred             CCCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCC
Q 039049           73 GVDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNES  144 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~  144 (305)
                      ++|++|||||......    ..+.+...+++|+.++.++++++.    +. +.++||++||...+.+.+.          
T Consensus        83 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~----------  151 (260)
T 1x1t_A           83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ-GFGRIINIASAHGLVASAN----------  151 (260)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCTT----------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEECcHHhCcCCCC----------
Confidence            6899999999765321    345677899999999999988874    33 5679999999876543211          


Q ss_pred             CCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCch--------HHHHHHH-HhcC
Q 039049          145 HWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTST--------LLLILAM-VKGL  212 (305)
Q Consensus       145 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~--------~~~~~~~-~~~~  212 (305)
                           .      ..|+.||...+.+.+.++.++   ++++++++|+.+.++.........        ....... ....
T Consensus       152 -----~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (260)
T 1x1t_A          152 -----K------SAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQ  220 (260)
T ss_dssp             -----C------HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHC
T ss_pred             -----C------chHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccC
Confidence                 1      679999999999999888774   799999999999988643211000        0000000 0111


Q ss_pred             CCCCCCCCccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          213 RGEYPNTTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       213 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                            ....+.+++|+|+++++++....   .+..+++.|.
T Consensus       221 ------p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG  256 (260)
T 1x1t_A          221 ------PSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGG  256 (260)
T ss_dssp             ------TTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ------CCCCCcCHHHHHHHHHHHhChhhcCCCCCEEEECCC
Confidence                  13468999999999999997543   2446777654

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.93  E-value=3.5e-24  Score=178.40  Aligned_cols=216  Identities=14%  Similarity=0.140  Sum_probs=160.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCC-cccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPE-DLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |+|+||||+|+||++++++|+++|++|+++.+... ....  ..........++.++++|+.|.+++.++++       +
T Consensus        27 k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~--~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  104 (267)
T 4iiu_A           27 RSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQE--TLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGA  104 (267)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHH--HHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHH--HHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            57999999999999999999999999988765432 2211  111122224578999999999998888775       7


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH-----hcCCccEEEEeccceeeeccCCCCCCcccCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK-----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNES  144 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~-----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~  144 (305)
                      +|+||||||......    ..+.+...+++|+.++.++++.+.     +. +..+||++||...+.+.+..         
T Consensus       105 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~---------  174 (267)
T 4iiu_A          105 WYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGAR-QGGRIITLSSVSGVMGNRGQ---------  174 (267)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SCEEEEEECCHHHHHCCTTC---------
T ss_pred             ccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCcEEEEEcchHhccCCCCC---------
Confidence            899999999876432    455678899999999999998863     34 55799999998765543221         


Q ss_pred             CCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCc
Q 039049          145 HWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTV  221 (305)
Q Consensus       145 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (305)
                                  ..|+.||.+.+.+.+.++.++   ++++.+++|+.+.++.....    ...........+      ..
T Consensus       175 ------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~p------~~  232 (267)
T 4iiu_A          175 ------------VNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME----ESALKEAMSMIP------MK  232 (267)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC----HHHHHHHHHTCT------TC
T ss_pred             ------------chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc----HHHHHHHHhcCC------CC
Confidence                        679999999999988887765   89999999999998864332    223333333322      34


Q ss_pred             cceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          222 GFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      .+.+++|+|+++.+++....   .+..+++.|+
T Consensus       233 ~~~~~edva~~~~~L~s~~~~~itG~~i~vdGG  265 (267)
T 4iiu_A          233 RMGQAEEVAGLASYLMSDIAGYVTRQVISINGG  265 (267)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCcCHHHHHHHHHHHhCCcccCccCCEEEeCCC
Confidence            57899999999999997643   2456777654

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.93  E-value=1.1e-24  Score=182.56  Aligned_cols=218  Identities=16%  Similarity=0.094  Sum_probs=157.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+|+||||+|+||++++++|+++|++|++++|+............  ....++.++++|+.|.+++.++++       ++
T Consensus        35 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i  112 (279)
T 3ctm_A           35 KVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQK--TYGVHSKAYKCNISDPKSVEETISQQEKDFGTI  112 (279)
T ss_dssp             CEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHH--HHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--hcCCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            679999999999999999999999999999998765433222111  113468899999999998888775       48


Q ss_pred             CEEEEecccccc------CCCCchhhhhhhhhHHH----HHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCC
Q 039049           75 DGVFHTASPVLV------PYDNNIQATLIDPCIKG----TLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNES  144 (305)
Q Consensus        75 d~Vi~~a~~~~~------~~~~~~~~~~~~~n~~~----~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~  144 (305)
                      |+|||+||....      ....+.+...+++|+.+    ++++++.+++. +.++||++||...+.+.            
T Consensus       113 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~------------  179 (279)
T 3ctm_A          113 DVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKN-GKGSLIITSSISGKIVN------------  179 (279)
T ss_dssp             SEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCCTTSCC-------------
T ss_pred             CEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCeEEEECchHhccCC------------
Confidence            999999997654      11234566788999999    55666666666 67899999997643320            


Q ss_pred             CCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCc
Q 039049          145 HWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTV  221 (305)
Q Consensus       145 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (305)
                       ...+.      ..|+.+|.+.|.+++.++.++   + ++++++|+.+.++..... .  ...........+      ..
T Consensus       180 -~~~~~------~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~-~--~~~~~~~~~~~p------~~  242 (279)
T 3ctm_A          180 -IPQLQ------APYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFA-S--KDMKAKWWQLTP------LG  242 (279)
T ss_dssp             ---CCH------HHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSC-C--HHHHHHHHHHST------TC
T ss_pred             -CCCCc------ccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccccc-C--hHHHHHHHHhCC------cc
Confidence             00111      679999999999999998774   6 899999999988864321 1  112222222211      34


Q ss_pred             cceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          222 GFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      .+++++|+|+++++++..+.   .+..+++.|.
T Consensus       243 ~~~~~~dvA~~~~~l~s~~~~~~tG~~i~vdgG  275 (279)
T 3ctm_A          243 REGLTQELVGGYLYLASNASTFTTGSDVVIDGG  275 (279)
T ss_dssp             SCBCGGGTHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence            58999999999999997643   3446777654

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.93  E-value=5.1e-25  Score=183.08  Aligned_cols=220  Identities=18%  Similarity=0.141  Sum_probs=160.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.+........  ......++.++++|+.|.+++.++++       ++
T Consensus        12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   89 (264)
T 3ucx_A           12 KVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQ--VTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRV   89 (264)
T ss_dssp             CEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH--HHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHH--HHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            6799999999999999999999999999999986543332211  11224478999999999998888775       68


Q ss_pred             CEEEEeccccccC-----CCCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVP-----YDNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |++|||||.....     ...+.+...+++|+.++.++++++...   .+ .+||++||...+.+.+..           
T Consensus        90 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~-----------  157 (264)
T 3ucx_A           90 DVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAKY-----------  157 (264)
T ss_dssp             SEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTTC-----------
T ss_pred             cEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCcc-----------
Confidence            9999999875321     144667788999999999999887532   13 699999998765432211           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCC--------CchHHHHHHHHhcCCCC
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQP--------TSTLLLILAMVKGLRGE  215 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~--------~~~~~~~~~~~~~~~~~  215 (305)
                                ..|+.||...+.+.+.++.+   +++++..++|+.++++......        ............+.+  
T Consensus       158 ----------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--  225 (264)
T 3ucx_A          158 ----------GAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSD--  225 (264)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSS--
T ss_pred             ----------HHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCC--
Confidence                      66999999999999988877   5899999999999887421100        000111122222221  


Q ss_pred             CCCCCccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          216 YPNTTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       216 ~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                          ...+.+++|+|+++++++....   .+..+++.|.
T Consensus       226 ----~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  260 (264)
T 3ucx_A          226 ----LKRLPTEDEVASAILFMASDLASGITGQALDVNCG  260 (264)
T ss_dssp             ----SSSCCBHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ----cccCCCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence                4668999999999999997643   3556788654

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.93  E-value=2.3e-24  Score=178.18  Aligned_cols=223  Identities=16%  Similarity=0.093  Sum_probs=163.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.+.......   ..  ..++.++++|+.|.+++.++++       ++
T Consensus         9 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~---~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (255)
T 4eso_A            9 KKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIRE---EF--GPRVHALRSDIADLNEIAVLGAAAGQTLGAI   83 (255)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HH--GGGEEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---Hh--CCcceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            579999999999999999999999999999998654332211   11  3478999999999988887664       68


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCCCcccCCCCCCCc
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA-KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDP  149 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~  149 (305)
                      |++|||||......    ..+.+...+++|+.++.++++++... ....+||++||...+.+.+..              
T Consensus        84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------------  149 (255)
T 4eso_A           84 DLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPGM--------------  149 (255)
T ss_dssp             EEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCTTB--------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCc--------------
Confidence            99999999876432    45667888999999999999998764 123589999998765443211              


Q ss_pred             ccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCch---HHHHHHHHhcCCCCCCCCCccc
Q 039049          150 DYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTST---LLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       150 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                             ..|+.||.+.+.+.+.++.++   |+++..++|+.+.++.........   ..+........+      ...+
T Consensus       150 -------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p------~~r~  216 (255)
T 4eso_A          150 -------SVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITP------MKRN  216 (255)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHST------TSSC
T ss_pred             -------hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCC------CCCC
Confidence                   679999999999999998775   899999999999988643321111   111112222222      4557


Q ss_pred             eeHHHHHHHHHHhhccc-c-cCceEEEec-CCcCHH
Q 039049          224 VHIDDVVGAHILAMEET-R-ASGRLICSS-SVAHWS  256 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~-~-~~~~~~~~~-~~~s~~  256 (305)
                      .+++|+|+++++++... . .+..+++.| ...++.
T Consensus       217 ~~pedvA~~v~~L~s~~~~itG~~i~vdGG~~~~l~  252 (255)
T 4eso_A          217 GTADEVARAVLFLAFEATFTTGAKLAVDGGLGQKLS  252 (255)
T ss_dssp             BCHHHHHHHHHHHHHTCTTCCSCEEEESTTTTTTBC
T ss_pred             cCHHHHHHHHHHHcCcCcCccCCEEEECCCccccCc
Confidence            89999999999998752 1 245678854 444443

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.93  E-value=9.4e-25  Score=182.33  Aligned_cols=220  Identities=17%  Similarity=0.154  Sum_probs=152.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEE-EeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTT-VRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      ++|+||||+|+||+++++.|+++|++|+++ .|+.+.......  .......++.++++|+.|.+++.++++       +
T Consensus        27 k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  104 (272)
T 4e3z_A           27 PVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVA--AITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGR  104 (272)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHH--HHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHH--HHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            579999999999999999999999999887 444332222111  111223478999999999988887765       6


Q ss_pred             CCEEEEeccccccCC-----CCchhhhhhhhhHHHHHHHHHHHHhc------CCccEEEEeccceeeeccCCCCCCcccC
Q 039049           74 VDGVFHTASPVLVPY-----DNNIQATLIDPCIKGTLNVLSSCKKA------KSVKRVVLTSSCSSIRYRHDAQQVSPLN  142 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~v~~SS~~~~~~~~~~~~~~~~~  142 (305)
                      +|+||||||......     ..+.+...+++|+.++.++++++...      ++.++||++||...+.+...        
T Consensus       105 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------  176 (272)
T 4e3z_A          105 LDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSAT--------  176 (272)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTT--------
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCC--------
Confidence            899999999865421     45567789999999999999887543      13468999999876554211        


Q ss_pred             CCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCC
Q 039049          143 ESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNT  219 (305)
Q Consensus       143 E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (305)
                            ..      ..|+.||.+.+.+.+.++.++   ++++++++|+.+.++......  ............      .
T Consensus       177 ------~~------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~------~  236 (272)
T 4e3z_A          177 ------QY------VDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGG--LPDRAREMAPSV------P  236 (272)
T ss_dssp             ------TC------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC--------------------CC------T
T ss_pred             ------Cc------chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccC--ChHHHHHHhhcC------C
Confidence                  00      569999999999999888775   899999999999988543210  111111111111      1


Q ss_pred             CccceeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          220 TVGFVHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       220 ~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      ...+.+++|+|+++++++.....   +..++++|+
T Consensus       237 ~~~~~~~edvA~~i~~l~s~~~~~~tG~~i~vdgG  271 (272)
T 4e3z_A          237 MQRAGMPEEVADAILYLLSPSASYVTGSILNVSGG  271 (272)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCCCcCHHHHHHHHHHHhCCccccccCCEEeecCC
Confidence            44578899999999999975432   456788643

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.93  E-value=1e-24  Score=182.52  Aligned_cols=221  Identities=17%  Similarity=0.120  Sum_probs=158.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+++.......  .+.....++.++++|+.|.+++.++++       ++
T Consensus        23 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  100 (277)
T 2rhc_B           23 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLK--ELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV  100 (277)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--HHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            579999999999999999999999999999998654322111  111113468899999999998887775       68


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc-----CCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA-----KSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      |+||||||......    ..+.+...+++|+.++.++++++...     .+.++||++||...+.+.+.           
T Consensus       101 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~-----------  169 (277)
T 2rhc_B          101 DVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVH-----------  169 (277)
T ss_dssp             SEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTT-----------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCC-----------
Confidence            99999999765431    34456778999999999999987543     14579999999875433211           


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCc--h------HHHHHHHHhcCCC
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTS--T------LLLILAMVKGLRG  214 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~--~------~~~~~~~~~~~~~  214 (305)
                          .      ..|+.+|...+.+.+.++.+.   ++++++++|+.+.++........  .      ...........+ 
T Consensus       170 ----~------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-  238 (277)
T 2rhc_B          170 ----A------APYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVP-  238 (277)
T ss_dssp             ----C------HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHST-
T ss_pred             ----C------ccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCC-
Confidence                1      679999999999999888764   79999999999988742110000  0      001111111111 


Q ss_pred             CCCCCCccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          215 EYPNTTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       215 ~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                           ...+++++|+|+++++++..+.   .+..+++.|.
T Consensus       239 -----~~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG  273 (277)
T 2rhc_B          239 -----IGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG  273 (277)
T ss_dssp             -----TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -----CCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCC
Confidence                 3568999999999999997653   3456788654

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.93  E-value=1.1e-24  Score=182.19  Aligned_cols=218  Identities=13%  Similarity=0.108  Sum_probs=159.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.+.......   .  ...++.++++|+.|.+++.++++       ++
T Consensus        28 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~---~--~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  102 (277)
T 4dqx_A           28 RVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVAN---E--IGSKAFGVRVDVSSAKDAESMVEKTTAKWGRV  102 (277)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---H--HCTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---H--hCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            679999999999999999999999999999998654332211   1  13478899999999998888775       78


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      |++|||||......    ..+.+...+++|+.++.++++++...   .+..+||++||...+.+.+.             
T Consensus       103 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------  169 (277)
T 4dqx_A          103 DVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIAD-------------  169 (277)
T ss_dssp             CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTT-------------
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCC-------------
Confidence            99999999765432    34567778899999999999887432   14569999999876543221             


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCC---CCCchHHHHHHHHhcCCCCCCCCCc
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAP---QPTSTLLLILAMVKGLRGEYPNTTV  221 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  221 (305)
                        .      ..|+.||.+.+.+.+.++.++   ++++.+++||.+.++....   ................+      ..
T Consensus       170 --~------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~------~~  235 (277)
T 4dqx_A          170 --R------TAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAV------MD  235 (277)
T ss_dssp             --B------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTST------TC
T ss_pred             --C------hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCc------cc
Confidence              1      679999999999999988775   8999999999998763100   00111111111222211      45


Q ss_pred             cceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          222 GFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      .+.+++|+|+++++++....   .+..+++.|.
T Consensus       236 r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  268 (277)
T 4dqx_A          236 RMGTAEEIAEAMLFLASDRSRFATGSILTVDGG  268 (277)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             CCcCHHHHHHHHHHHhCCccCCCcCCEEEECCc
Confidence            67899999999999997654   3556888643

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.93  E-value=1.5e-24  Score=178.30  Aligned_cols=199  Identities=13%  Similarity=0.118  Sum_probs=152.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-------eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-------MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--   72 (305)
                      |+|+||||+|+||+++++.|+++|+       +|++++|+.........  .......++.++++|+.|.+++.++++  
T Consensus         3 k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (244)
T 2bd0_A            3 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISL--ECRAEGALTDTITADISDMADVRRLTTHI   80 (244)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHH--HHHTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHH--HHHccCCeeeEEEecCCCHHHHHHHHHHH
Confidence            6799999999999999999999999       99999997653322211  111223478899999999998888775  


Q ss_pred             -----CCCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCCCc
Q 039049           73 -----GVDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKK----AKSVKRVVLTSSCSSIRYRHDAQQVS  139 (305)
Q Consensus        73 -----~~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  139 (305)
                           ++|+||||||......    ..+.+...+++|+.++.++++++..    . +.++||++||..++.+.+.     
T Consensus        81 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~-----  154 (244)
T 2bd0_A           81 VERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQ-HSGHIFFITSVAATKAFRH-----  154 (244)
T ss_dssp             HHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCTT-----
T ss_pred             HHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCEEEEEecchhcCCCCC-----
Confidence                 6899999999865431    3456777899999999999988743    3 5679999999876543211     


Q ss_pred             ccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCC
Q 039049          140 PLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEY  216 (305)
Q Consensus       140 ~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  216 (305)
                                .      ..|+.+|.+.+.+.+.++.+   .+++++++||+.++++.......            ..   
T Consensus       155 ----------~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~------------~~---  203 (244)
T 2bd0_A          155 ----------S------SIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD------------EM---  203 (244)
T ss_dssp             ----------C------HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS------------TT---
T ss_pred             ----------C------chhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccc------------cc---
Confidence                      1      67999999999999887654   48999999999999986432110            00   


Q ss_pred             CCCCccceeHHHHHHHHHHhhccccc
Q 039049          217 PNTTVGFVHIDDVVGAHILAMEETRA  242 (305)
Q Consensus       217 ~~~~~~~i~v~D~a~~~~~~~~~~~~  242 (305)
                         ...+++++|+|++++.++..+..
T Consensus       204 ---~~~~~~~~dva~~~~~l~~~~~~  226 (244)
T 2bd0_A          204 ---QALMMMPEDIAAPVVQAYLQPSR  226 (244)
T ss_dssp             ---GGGSBCHHHHHHHHHHHHTSCTT
T ss_pred             ---cccCCCHHHHHHHHHHHHhCCcc
Confidence               23689999999999999986543

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.93  E-value=1.1e-24  Score=180.37  Aligned_cols=215  Identities=14%  Similarity=0.087  Sum_probs=154.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.+. ...  .....    + .++++|+.|.+++.++++       ++
T Consensus         7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~--~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~~~g~i   78 (256)
T 2d1y_A            7 KGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEV--AEAIG----G-AFFQVDLEDERERVRFVEEAAYALGRV   78 (256)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHH--HHHHT----C-EEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHH--HHHhh----C-CEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            579999999999999999999999999999998764 221  11111    3 788999999988887765       68


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      |+||||||......    ..+.+...+++|+.++.++++++...   .+.++||++||...+.+.+.             
T Consensus        79 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~-------------  145 (256)
T 2d1y_A           79 DVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQE-------------  145 (256)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTT-------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCC-------------
Confidence            99999999765432    33456788999999999999887432   25689999999875443211             


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCC---CchHHHHHHHHhcCCCCCCCCCc
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQP---TSTLLLILAMVKGLRGEYPNTTV  221 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  221 (305)
                        .      ..|+.||...+.+.+.++.+.   ++++++++|+.+.++......   .............      ....
T Consensus       146 --~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~------~~~~  211 (256)
T 2d1y_A          146 --N------AAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDL------HALR  211 (256)
T ss_dssp             --B------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTT------STTS
T ss_pred             --C------hhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhc------CCCC
Confidence              1      679999999999999888764   899999999999875311000   0000000011111      1145


Q ss_pred             cceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          222 GFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      .+++++|+|++++++++.+.   .+..+++.+.
T Consensus       212 ~~~~~~dvA~~~~~l~s~~~~~~~G~~~~v~gG  244 (256)
T 2d1y_A          212 RLGKPEEVAEAVLFLASEKASFITGAILPVDGG  244 (256)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCcCHHHHHHHHHHHhCchhcCCCCCEEEECCC
Confidence            68999999999999997653   3456888643

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.93  E-value=1.2e-24  Score=179.97  Aligned_cols=214  Identities=12%  Similarity=0.068  Sum_probs=155.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCe-EEEEEeCCCcccchhhhhhccCccCceEEEEccCCCc-chHHHHhc-------
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHM-VRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME-GSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~-------   72 (305)
                      |+++||||+|+||+++++.|+++|++ |++++|+... .....+..... ..++.++.+|+.|. +++.++++       
T Consensus         6 k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~-~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   83 (254)
T 1sby_A            6 KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP-TALAELKAINP-KVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH-HHHHHHHHHCT-TSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH-HHHHHHHHhCC-CceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence            68999999999999999999999997 9999998642 12222222111 33688999999998 77777664       


Q ss_pred             CCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcC---C---ccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           73 GVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAK---S---VKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~---~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      ++|+||||||...    .+.+...+++|+.++.++++++....   +   ..+||++||...+.+.+.            
T Consensus        84 ~id~lv~~Ag~~~----~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------  147 (254)
T 1sby_A           84 TVDILINGAGILD----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQ------------  147 (254)
T ss_dssp             CCCEEEECCCCCC----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT------------
T ss_pred             CCCEEEECCccCC----HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCC------------
Confidence            7899999999853    45677799999999999999886420   1   358999999876543211            


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCch--HHHHHHHHhcCCCCCCCCCc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTST--LLLILAMVKGLRGEYPNTTV  221 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  221 (305)
                         .      ..|+.||.+.+.+.+.++.+   .++++++++|+.+.++.........  ...+.....         ..
T Consensus       148 ---~------~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~  209 (254)
T 1sby_A          148 ---V------PVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLL---------SH  209 (254)
T ss_dssp             ---S------HHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHT---------TS
T ss_pred             ---c------hHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHh---------cC
Confidence               1      67999999999999888766   5899999999999987422110000  000111111         12


Q ss_pred             cceeHHHHHHHHHHhhcccccCceEEEecC
Q 039049          222 GFVHIDDVVGAHILAMEETRASGRLICSSS  251 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~  251 (305)
                      .+.+++|+|++++.+++....+..|++.+.
T Consensus       210 ~~~~~~dvA~~i~~~~~~~~~G~~~~v~gG  239 (254)
T 1sby_A          210 PTQTSEQCGQNFVKAIEANKNGAIWKLDLG  239 (254)
T ss_dssp             CCEEHHHHHHHHHHHHHHCCTTCEEEEETT
T ss_pred             CCCCHHHHHHHHHHHHHcCCCCCEEEEeCC
Confidence            345999999999999986556667888653

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.93  E-value=3.1e-24  Score=178.51  Aligned_cols=216  Identities=15%  Similarity=0.133  Sum_probs=157.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+|+||||+|+||+++++.|+++|++|++++|+.+.......  ..   ..++.++++|+.|.+++.++++       ++
T Consensus        13 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~--~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   87 (265)
T 2o23_A           13 LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAK--KL---GNNCVFAPADVTSEKDVQTALALAKGKFGRV   87 (265)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHH--HH---CTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHH--Hh---CCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence            689999999999999999999999999999998765432211  11   2368999999999998888876       79


Q ss_pred             CEEEEeccccccC----------CCCchhhhhhhhhHHHHHHHHHHHHhc---C------CccEEEEeccceeeeccCCC
Q 039049           75 DGVFHTASPVLVP----------YDNNIQATLIDPCIKGTLNVLSSCKKA---K------SVKRVVLTSSCSSIRYRHDA  135 (305)
Q Consensus        75 d~Vi~~a~~~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~---~------~~~~~v~~SS~~~~~~~~~~  135 (305)
                      |+||||||.....          ...+.+...+++|+.++.++++++...   .      +.++||++||...+.+.+. 
T Consensus        88 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-  166 (265)
T 2o23_A           88 DVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVG-  166 (265)
T ss_dssp             CEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTT-
T ss_pred             CEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCCCC-
Confidence            9999999986542          134456778999999999999988653   1      3468999999876543211 


Q ss_pred             CCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcC
Q 039049          136 QQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGL  212 (305)
Q Consensus       136 ~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~  212 (305)
                                    .      ..|+.+|.+.+.+.+.++.+   .++++++++|+.+.++.......   ..........
T Consensus       167 --------------~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~~~~~~~~  223 (265)
T 2o23_A          167 --------------Q------AAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPE---KVCNFLASQV  223 (265)
T ss_dssp             --------------C------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-------------CHHHHTC
T ss_pred             --------------C------chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCH---HHHHHHHHcC
Confidence                          1      67999999999999888766   38999999999998875322100   0111111111


Q ss_pred             CCCCCCCCccceeHHHHHHHHHHhhccccc-CceEEEecC
Q 039049          213 RGEYPNTTVGFVHIDDVVGAHILAMEETRA-SGRLICSSS  251 (305)
Q Consensus       213 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~~~~~~  251 (305)
                      +  .   ...+++++|+|++++.+++.+.. +..+++.+.
T Consensus       224 ~--~---~~~~~~~~dva~~~~~l~~~~~~~G~~i~vdgG  258 (265)
T 2o23_A          224 P--F---PSRLGDPAEYAHLVQAIIENPFLNGEVIRLDGA  258 (265)
T ss_dssp             S--S---SCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             C--C---cCCCCCHHHHHHHHHHHhhcCccCceEEEECCC
Confidence            1  1   14578999999999999976554 445777543

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.93  E-value=1.2e-24  Score=181.27  Aligned_cols=214  Identities=15%  Similarity=0.123  Sum_probs=159.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCc-ccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPED-LSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |+++||||+|+||+++++.|+++|++|+++.|+... ......  .......++.++++|+.|.+++.++++       +
T Consensus        29 k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~  106 (269)
T 4dmm_A           29 RIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVA--AIAAAGGEAFAVKADVSQESEVEALFAAVIERWGR  106 (269)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHH--HHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHH--HHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            579999999999999999999999999999885432 211111  111123478899999999998888775       7


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|++|||||......    ..+.+...+++|+.++.++++++.    +. +..+||++||...+.+.+..          
T Consensus       107 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~----------  175 (269)
T 4dmm_A          107 LDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQ-RSGRIINIASVVGEMGNPGQ----------  175 (269)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCHHHHHCCTTC----------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECchhhcCCCCCc----------
Confidence            899999999875432    456678899999999999998873    33 55799999998765443221          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                                 ..|+.||.+.+.+.+.++.+   .|+++++++|+.+.++....    ..  ........+      ...
T Consensus       176 -----------~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~----~~--~~~~~~~~p------~~r  232 (269)
T 4dmm_A          176 -----------ANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSE----LA--AEKLLEVIP------LGR  232 (269)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCH----HH--HHHHGGGCT------TSS
T ss_pred             -----------hhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCccccc----cc--HHHHHhcCC------CCC
Confidence                       67999999999999888876   48999999999998875321    11  111112211      456


Q ss_pred             ceeHHHHHHHHHHhhcccc----cCceEEEecC
Q 039049          223 FVHIDDVVGAHILAMEETR----ASGRLICSSS  251 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~----~~~~~~~~~~  251 (305)
                      +.+++|+|+++++++..+.    .+..+++.|.
T Consensus       233 ~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG  265 (269)
T 4dmm_A          233 YGEAAEVAGVVRFLAADPAAAYITGQVINIDGG  265 (269)
T ss_dssp             CBCHHHHHHHHHHHHHCGGGGGCCSCEEEESTT
T ss_pred             CCCHHHHHHHHHHHhCCcccCCCcCCEEEECCC
Confidence            7899999999999998732    2556888643

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.93  E-value=1.4e-24  Score=179.84  Aligned_cols=221  Identities=13%  Similarity=0.104  Sum_probs=157.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCc--ccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPED--LSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.+.  ....  ...+.....++.++++|+.|.+++.++++       
T Consensus         3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (258)
T 3a28_C            3 KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAET--IKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLG   80 (258)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHH--HHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHH--HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            689999999999999999999999999999998654  2221  11122223478899999999998888775       


Q ss_pred             CCCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCc-cEEEEeccceeeeccCCCCCCcccCCC
Q 039049           73 GVDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSV-KRVVLTSSCSSIRYRHDAQQVSPLNES  144 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~-~~~v~~SS~~~~~~~~~~~~~~~~~E~  144 (305)
                      ++|++|||||......    ..+.+...+++|+.++.++++++...   .+. ++||++||...+.+.+.          
T Consensus        81 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------  150 (258)
T 3a28_C           81 GFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPI----------  150 (258)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTT----------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCC----------
Confidence            7899999999765431    34567788999999999999887642   145 79999999875443211          


Q ss_pred             CCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCC--------CchHHHHHHHHhcCC
Q 039049          145 HWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQP--------TSTLLLILAMVKGLR  213 (305)
Q Consensus       145 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~--------~~~~~~~~~~~~~~~  213 (305)
                           .      ..|+.||...+.+.+.++.+.   ++++++++|+.+.++......        ..............+
T Consensus       151 -----~------~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  219 (258)
T 3a28_C          151 -----L------SAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIA  219 (258)
T ss_dssp             -----C------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCT
T ss_pred             -----c------hhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCC
Confidence                 1      679999999999999888764   899999999999776311000        000001111111111


Q ss_pred             CCCCCCCccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          214 GEYPNTTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       214 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                            ...+.+++|+|+++++++..+.   .+..+++.|.
T Consensus       220 ------~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  254 (258)
T 3a28_C          220 ------LGRPSVPEDVAGLVSFLASENSNYVTGQVMLVDGG  254 (258)
T ss_dssp             ------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             ------CCCccCHHHHHHHHHHHhCcccCCCCCCEEEECCC
Confidence                  3458899999999999997643   3445777543

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.93  E-value=1.3e-24  Score=180.53  Aligned_cols=209  Identities=16%  Similarity=0.136  Sum_probs=155.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+......             ...+++|+.|.+.+.++++       ++
T Consensus        29 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~-------------~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   95 (266)
T 3uxy_A           29 KVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA-------------DLHLPGDLREAAYADGLPGAVAAGLGRL   95 (266)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCC-------------SEECCCCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHh-------------hhccCcCCCCHHHHHHHHHHHHHhcCCC
Confidence            679999999999999999999999999999997653321             2345789999887776654       78


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |++|||||......    ..+.+...+++|+.++.++++++    ++. +..+||++||...+.+.+.            
T Consensus        96 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~~~~~------------  162 (266)
T 3uxy_A           96 DIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAA-GGGAIVNVASCWGLRPGPG------------  162 (266)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCSBTTBCCTT------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECCHHhCCCCCC------------
Confidence            99999999876432    45567778999999999999998    444 5679999999876543221            


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCC----CCchHHHHHHHHhcCCCCCCCC
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQ----PTSTLLLILAMVKGLRGEYPNT  219 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~  219 (305)
                         .      ..|+.||.+.+.+.+.++.++   ++++++++|+.+.++.....    ...............+      
T Consensus       163 ---~------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p------  227 (266)
T 3uxy_A          163 ---H------ALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVP------  227 (266)
T ss_dssp             ---B------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTST------
T ss_pred             ---C------hHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCC------
Confidence               1      679999999999999988775   89999999999988742100    0000111122222211      


Q ss_pred             CccceeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          220 TVGFVHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       220 ~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      ...+.+++|+|+++++++.....   +..+++.|.
T Consensus       228 ~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  262 (266)
T 3uxy_A          228 LGRIAEPEDIADVVLFLASDAARYLCGSLVEVNGG  262 (266)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECcC
Confidence            45689999999999999986543   456788543

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.93  E-value=1e-24  Score=181.63  Aligned_cols=217  Identities=16%  Similarity=0.123  Sum_probs=160.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.+........  ......++.++.+|+.|.+++.++++       ++
T Consensus        29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (270)
T 3ftp_A           29 QVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAA--FKQAGLEGRGAVLNVNDATAVDALVESTLKEFGAL  106 (270)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH--HHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH--HHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            5799999999999999999999999999999986543322211  11123467899999999998888775       78


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKK----AKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |++|||||......    ..+.+...+++|+.++.++++++..    . +..+||++||...+.+.+..           
T Consensus       107 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~-----------  174 (270)
T 3ftp_A          107 NVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKA-RGGRIVNITSVVGSAGNPGQ-----------  174 (270)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHHCCTTB-----------
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEECchhhCCCCCCc-----------
Confidence            99999999765432    4556778899999999999998753    3 44689999998765443221           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                                ..|+.||.+.+.+.+.++.+   .++++++++|+.+.++.....   ............+      ...+
T Consensus       175 ----------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~p------~~r~  235 (270)
T 3ftp_A          175 ----------VNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGL---PQEQQTALKTQIP------LGRL  235 (270)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHS---CHHHHHHHHTTCT------TCSC
T ss_pred             ----------hhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhc---CHHHHHHHHhcCC------CCCC
Confidence                      67999999999999988877   489999999999987642111   0111122222211      4568


Q ss_pred             eeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          224 VHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      .+++|+|+++++++....   .+..+++.|.
T Consensus       236 ~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  266 (270)
T 3ftp_A          236 GSPEDIAHAVAFLASPQAGYITGTTLHVNGG  266 (270)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCHHHHHHHHHHHhCCCcCCccCcEEEECCC
Confidence            899999999999996543   3556888643

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.93  E-value=1.1e-24  Score=181.03  Aligned_cols=214  Identities=13%  Similarity=0.117  Sum_probs=154.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|++.+|+.+......   ..  ...++.++++|+.|.+++.++++       ++
T Consensus        28 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~---~~--~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  102 (266)
T 3grp_A           28 RKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIA---AD--LGKDVFVFSANLSDRKSIKQLAEVAEREMEGI  102 (266)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---HH--HCSSEEEEECCTTSHHHHHHHHHHHHHHHTSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HH--hCCceEEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence            67999999999999999999999999999999765433221   11  13478999999999998888775       78


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |++|||||......    ..+.+...+++|+.++.++.+++    ++. +..+||++||...+.+.+.            
T Consensus       103 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~Iv~isS~~~~~~~~~------------  169 (266)
T 3grp_A          103 DILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRR-RYGRIINITSIVGVVGNPG------------  169 (266)
T ss_dssp             CEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCC-------C------------
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcEEEEECCHHHcCCCCC------------
Confidence            99999999875432    34567778999999977777665    334 5579999999876554321            


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                               ...|+.||.+.+.+.+.++.++   ++++.+++|+.+.++.....   ............+      ...+
T Consensus       170 ---------~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~p------~~r~  231 (266)
T 3grp_A          170 ---------QTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKL---NEKQKEAIMAMIP------MKRM  231 (266)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTC---CHHHHHHHHTTCT------TCSC
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhcc---CHHHHHHHHhcCC------CCCC
Confidence                     1679999999999999888764   89999999999988743221   1112222222222      4567


Q ss_pred             eeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          224 VHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      .+++|+|+++++++....   .+..+++.|.
T Consensus       232 ~~~edvA~~v~~L~s~~~~~itG~~i~vdGG  262 (266)
T 3grp_A          232 GIGEEIAFATVYLASDEAAYLTGQTLHINGG  262 (266)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence            899999999999997654   3456777654

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.93  E-value=6.3e-25  Score=183.75  Aligned_cols=220  Identities=13%  Similarity=0.075  Sum_probs=160.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchh-hhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVG-FLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.+...... .+...  ...++.++++|+.|.+++.++++       +
T Consensus        28 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  105 (277)
T 4fc7_A           28 KVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGA--TGRRCLPLSMDVRAPPAVMAAVDQALKEFGR  105 (277)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHH--HSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--cCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            67999999999999999999999999999999865433221 11111  13478999999999988887775       7


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKK----AKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|++|||||......    ..+.+...+++|+.++.++.+++..    . +..+||++||...+.+....          
T Consensus       106 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~----------  174 (277)
T 4fc7_A          106 IDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRD-HGGVIVNITATLGNRGQALQ----------  174 (277)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH-HCEEEEEECCSHHHHTCTTC----------
T ss_pred             CCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEECchhhCCCCCCc----------
Confidence            899999999654322    4566788999999999999998743    3 44699999998765443221          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                                 ..|+.||.+.+.+.+.++.++   |+++..++|+.+.++....................+      ...
T Consensus       175 -----------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p------~~r  237 (277)
T 4fc7_A          175 -----------VHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASP------LQR  237 (277)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTST------TSS
T ss_pred             -----------HHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCC------CCC
Confidence                       679999999999999988775   899999999999886311000001112222222222      345


Q ss_pred             ceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          223 FVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      +..++|+|+++++++....   .+..+++.|.
T Consensus       238 ~~~p~dvA~~v~fL~s~~~~~itG~~i~vdGG  269 (277)
T 4fc7_A          238 LGNKTEIAHSVLYLASPLASYVTGAVLVADGG  269 (277)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHcCCccCCcCCCEEEECCC
Confidence            7899999999999998543   3456777654

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.93  E-value=2.3e-24  Score=180.71  Aligned_cols=223  Identities=18%  Similarity=0.116  Sum_probs=160.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|+||+++++.|++.|++|++++|+.+...+...  .+.....++.++++|+.|.+++.++++       ++
T Consensus        29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~--~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (283)
T 3v8b_A           29 PVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVAD--EIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHL  106 (283)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH--HHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--HHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            579999999999999999999999999999998654332221  122234578999999999988887775       68


Q ss_pred             CEEEEecccccc-----CCCCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           75 DGVFHTASPVLV-----PYDNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        75 d~Vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      |++|||||....     ....+.+...+++|+.++.++++++    ++. +..+||++||...+...+.           
T Consensus       107 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~Iv~isS~~~~~~~~~-----------  174 (283)
T 3v8b_A          107 DIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQR-GGGAIVVVSSINGTRTFTT-----------  174 (283)
T ss_dssp             CEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCSBTTTBCCS-----------
T ss_pred             CEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCceEEEEcChhhccCCCC-----------
Confidence            999999997543     1144567788999999999999988    445 5679999999765331110           


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCC-CC--
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYP-NT--  219 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--  219 (305)
                        .+.      ..|+.||.+.+.+.+.++.+.   ++++..++||.+..+..........     .....+.... ..  
T Consensus       175 --~~~------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~-----~~~~~~~~~~~~~~p  241 (283)
T 3v8b_A          175 --PGA------TAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHE-----EETAIPVEWPKGQVP  241 (283)
T ss_dssp             --TTC------HHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCH-----HHHSCCCBCTTCSCG
T ss_pred             --CCc------hHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccc-----hhhhhhhhhhhhcCc
Confidence              011      679999999999999998874   7999999999998876443211110     0011111110 11  


Q ss_pred             C--ccceeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          220 T--VGFVHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       220 ~--~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      .  ..+..++|+|+++++++.....   +..+++.|.
T Consensus       242 ~~~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG  278 (283)
T 3v8b_A          242 ITDGQPGRSEDVAELIRFLVSERARHVTGSPVWIDGG  278 (283)
T ss_dssp             GGTTCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             cccCCCCCHHHHHHHHHHHcCccccCCcCCEEEECcC
Confidence            2  4578999999999999976443   445777554

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.93  E-value=3e-24  Score=177.83  Aligned_cols=211  Identities=14%  Similarity=0.088  Sum_probs=152.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |++|||||+|+||+++++.|++.|++|++++|+.+...+  .+..     .++.++.+|+.|.+++.++++       ++
T Consensus        28 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~--~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  100 (260)
T 3gem_A           28 APILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVT--ELRQ-----AGAVALYGDFSCETGIMAFIDLLKTQTSSL  100 (260)
T ss_dssp             CCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHH--HHHH-----HTCEEEECCTTSHHHHHHHHHHHHHHCSCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH--HHHh-----cCCeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            679999999999999999999999999999998764321  1111     147899999999998888775       68


Q ss_pred             CEEEEeccccccCC---CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCCCC
Q 039049           75 DGVFHTASPVLVPY---DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSD  148 (305)
Q Consensus        75 d~Vi~~a~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~  148 (305)
                      |++|||||......   ..+.+...+++|+.++.++++++...   .+..+||++||...+.+.+..             
T Consensus       101 D~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~-------------  167 (260)
T 3gem_A          101 RAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKH-------------  167 (260)
T ss_dssp             SEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSC-------------
T ss_pred             CEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCc-------------
Confidence            99999999765432   23445678999999999999887432   255799999998765432211             


Q ss_pred             cccccccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeH
Q 039049          149 PDYCKHYNLWYAYAKTIAEKEAWRIAKDC--GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHI  226 (305)
Q Consensus       149 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  226 (305)
                              ..|+.||.+.+.+.+.++.++  ++++.+++|+.+.++....     ...........+      ...+..+
T Consensus       168 --------~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~-----~~~~~~~~~~~p------~~r~~~~  228 (260)
T 3gem_A          168 --------IAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDD-----AAYRANALAKSA------LGIEPGA  228 (260)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC--------------------CC------SCCCCCT
T ss_pred             --------HhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCC-----HHHHHHHHhcCC------CCCCCCH
Confidence                    679999999999999998776  4999999999998764221     011111111111      3446779


Q ss_pred             HHHHHHHHHhhccccc-CceEEEecC
Q 039049          227 DDVVGAHILAMEETRA-SGRLICSSS  251 (305)
Q Consensus       227 ~D~a~~~~~~~~~~~~-~~~~~~~~~  251 (305)
                      +|+|++++++++.... +..+++.|.
T Consensus       229 edva~~v~~L~~~~~itG~~i~vdGG  254 (260)
T 3gem_A          229 EVIYQSLRYLLDSTYVTGTTLTVNGG  254 (260)
T ss_dssp             HHHHHHHHHHHHCSSCCSCEEEESTT
T ss_pred             HHHHHHHHHHhhCCCCCCCEEEECCC
Confidence            9999999999965554 446888643

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.93  E-value=5.8e-24  Score=181.43  Aligned_cols=232  Identities=18%  Similarity=0.116  Sum_probs=156.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCc--ccchhhhhh-ccCccCceEEEEccCCCcchHHHHhc------
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPED--LSKVGFLWE-LNGAEERLKIMKADLLMEGSFDEAIQ------   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~--~~~~~~~~~-~~~~~~~~~~~~~D~~d~~~~~~~~~------   72 (305)
                      |+++||||+|+||+++++.|+++|++|++..|+...  ......+.. ......++.++++|++|.+++.++++      
T Consensus         6 k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~   85 (324)
T 3u9l_A            6 KIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGED   85 (324)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            579999999999999999999999999999997432  111122211 11123478999999999998888876      


Q ss_pred             -CCCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCC
Q 039049           73 -GVDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNE  143 (305)
Q Consensus        73 -~~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E  143 (305)
                       ++|+||||||......    ..+.+...+++|+.++.++++++    ++. +.+++|++||...+.....         
T Consensus        86 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~-~~g~iV~isS~~~~~~~~~---------  155 (324)
T 3u9l_A           86 GRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQ-KHGLLIWISSSSSAGGTPP---------  155 (324)
T ss_dssp             SCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCCS---------
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEEecchhccCCCC---------
Confidence             7899999999765432    44566778999999999999998    555 6689999999875432110         


Q ss_pred             CCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCC---CCchHHHHHHHHhcCCCCCC
Q 039049          144 SHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQ---PTSTLLLILAMVKGLRGEYP  217 (305)
Q Consensus       144 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~  217 (305)
                           ..      ..|+.||.+.|.+.+.++.+   .|+++++++||.+.++.....   ...................+
T Consensus       156 -----~~------~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (324)
T 3u9l_A          156 -----YL------APYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLG  224 (324)
T ss_dssp             -----SC------HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHH
T ss_pred             -----cc------hhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCH
Confidence                 01      66999999999999998877   589999999999986643211   11111111111111111111


Q ss_pred             CC--------CccceeHHHHHHHHHHhhccccc--CceEEEecCCcC
Q 039049          218 NT--------TVGFVHIDDVVGAHILAMEETRA--SGRLICSSSVAH  254 (305)
Q Consensus       218 ~~--------~~~~i~v~D~a~~~~~~~~~~~~--~~~~~~~~~~~s  254 (305)
                      +.        ..+..+++|+|++++.+++.+..  ...+.++.....
T Consensus       225 ~~~~~~~~~l~~~~~~p~~vA~aiv~~~~~~~~~~~~~~~~gp~~~~  271 (324)
T 3u9l_A          225 EEIKKAFAAIVPPDADVSLVADAIVRVVGTASGKRPFRVHVDPAEDG  271 (324)
T ss_dssp             HHHHHHHHHTSCTTCCTHHHHHHHHHHHTSCTTCCCSEEEECTTCCS
T ss_pred             HHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCCCCeEEEeCCcchH
Confidence            00        12236899999999999988743  223455544444

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.93  E-value=4.8e-24  Score=179.50  Aligned_cols=237  Identities=14%  Similarity=0.116  Sum_probs=163.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcc---------cchhhh-hhccCccCceEEEEccCCCcchHHHHh
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDL---------SKVGFL-WELNGAEERLKIMKADLLMEGSFDEAI   71 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~---------~~~~~~-~~~~~~~~~~~~~~~D~~d~~~~~~~~   71 (305)
                      |++|||||+|+||+++++.|+++|++|++++|+....         ...... ........++.++++|+.|.+++.+++
T Consensus        11 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   90 (287)
T 3pxx_A           11 KVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSREL   90 (287)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHH
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHH
Confidence            5799999999999999999999999999999873211         111111 111122457899999999999888777


Q ss_pred             c-------CCCEEEEeccccccC--CCCchhhhhhhhhHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCCCccc
Q 039049           72 Q-------GVDGVFHTASPVLVP--YDNNIQATLIDPCIKGTLNVLSSCKKAK-SVKRVVLTSSCSSIRYRHDAQQVSPL  141 (305)
Q Consensus        72 ~-------~~d~Vi~~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~  141 (305)
                      +       ++|++|||||.....  ...+.+...+++|+.++.++++++...- +..++|++||...+.....    .+.
T Consensus        91 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~----~~~  166 (287)
T 3pxx_A           91 ANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQ----PPG  166 (287)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHC----CC-
T ss_pred             HHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccc----ccc
Confidence            5       789999999987643  2456778899999999999999987641 3358999999886654321    122


Q ss_pred             CCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHH---------HHHH
Q 039049          142 NESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLI---------LAMV  209 (305)
Q Consensus       142 ~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~---------~~~~  209 (305)
                      .|..+..+.      ..|+.||...+.+.+.++.++   ++++..++|+.+.++......  ....+         ....
T Consensus       167 ~~~~~~~~~------~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~~~~~  238 (287)
T 3pxx_A          167 AGGPQGPGG------AGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAP--MYRQFRPDLEAPSRADAL  238 (287)
T ss_dssp             ----CHHHH------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHH--HHHHHCTTSSSCCHHHHH
T ss_pred             ccccCCCcc------chHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccc--hhhhhccccccchhHHHH
Confidence            222221111      669999999999999998775   899999999999988643200  00000         0000


Q ss_pred             hcCCCCCCCCCccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          210 KGLRGEYPNTTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       210 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      .... ........+.+++|+|+++++++....   .+..+++.|.
T Consensus       239 ~~~~-~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG  282 (287)
T 3pxx_A          239 LAFP-AMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAG  282 (287)
T ss_dssp             HHGG-GGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             hhhh-hhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECch
Confidence            0000 000112678999999999999997543   3556788644

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.93  E-value=1.4e-24  Score=182.83  Aligned_cols=219  Identities=12%  Similarity=0.072  Sum_probs=161.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccc-hhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSK-VGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |++|||||+|+||+++++.|+++|++|+++.|+...... ....  ......++.++++|+.|.+++.++++       +
T Consensus        48 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  125 (291)
T 3ijr_A           48 KNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQY--VEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGS  125 (291)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH--HHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHH--HHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            679999999999999999999999999999998653221 1111  12224578999999999998887775       6


Q ss_pred             CCEEEEeccccccCC-----CCchhhhhhhhhHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           74 VDGVFHTASPVLVPY-----DNNIQATLIDPCIKGTLNVLSSCKKA-KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      +|++|||||......     ..+.+...+++|+.++.++++++... ....+||++||...+.+....            
T Consensus       126 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~------------  193 (291)
T 3ijr_A          126 LNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNETL------------  193 (291)
T ss_dssp             CCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTTC------------
T ss_pred             CCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCCCC------------
Confidence            899999999764321     45667889999999999999998764 123589999998866543221            


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccce
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFV  224 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  224 (305)
                               ..|+.||...+.+.+.++.++   ++++.+++|+.++++.......  ..........      .....+.
T Consensus       194 ---------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~------~p~~r~~  256 (291)
T 3ijr_A          194 ---------IDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFD--EKKVSQFGSN------VPMQRPG  256 (291)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSC--HHHHHHTTTT------STTSSCB
T ss_pred             ---------hhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCC--HHHHHHHHcc------CCCCCCc
Confidence                     669999999999999988775   8999999999999874211000  0111111111      1146688


Q ss_pred             eHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          225 HIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       225 ~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      +++|+|+++++++....   .+..+++.|.
T Consensus       257 ~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  286 (291)
T 3ijr_A          257 QPYELAPAYVYLASSDSSYVTGQMIHVNGG  286 (291)
T ss_dssp             CGGGTHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             CHHHHHHHHHHHhCCccCCCcCCEEEECCC
Confidence            99999999999997653   2456777654

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.93  E-value=1.4e-24  Score=176.89  Aligned_cols=199  Identities=19%  Similarity=0.182  Sum_probs=146.5

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCC----CE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGV----DG   76 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~----d~   76 (305)
                      ||+++||||+|+||+++++.|+++|++|++++|+.+.......   .  ...++.++.+|+.|.+++.++++.+    |+
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~---~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~   75 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTN---C--LSNNVGYRARDLASHQEVEQLFEQLDSIPST   75 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH---T--CSSCCCEEECCTTCHHHHHHHHHSCSSCCSE
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---H--HhhccCeEeecCCCHHHHHHHHHHHhhcCCE
Confidence            8899999999999999999999999999999998654332211   1  1347889999999999999988754    99


Q ss_pred             EEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCCCcccCCCCCCCcc
Q 039049           77 VFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA--KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPD  150 (305)
Q Consensus        77 Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~  150 (305)
                      |||+||......    ..+.+...+++|+.++.++++++...  ....++|++||...+.+.+..               
T Consensus        76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~---------------  140 (230)
T 3guy_A           76 VVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQE---------------  140 (230)
T ss_dssp             EEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCTTC---------------
T ss_pred             EEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCCCC---------------
Confidence            999999765432    34566778999999999999987553  112389999998765432211               


Q ss_pred             cccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHH
Q 039049          151 YCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHID  227 (305)
Q Consensus       151 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  227 (305)
                            ..|+.||.+.+.+.+.++.++   ++++..++||.+..+......           ...      ....+++++
T Consensus       141 ------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-----------~~~------~~~~~~~~~  197 (230)
T 3guy_A          141 ------STYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSG-----------KSL------DTSSFMSAE  197 (230)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC---------------------------------CCCHH
T ss_pred             ------chhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcC-----------CCC------CcccCCCHH
Confidence                  679999999999999998875   799999999999876422110           000      145678999


Q ss_pred             HHHHHHHHhhccccc
Q 039049          228 DVVGAHILAMEETRA  242 (305)
Q Consensus       228 D~a~~~~~~~~~~~~  242 (305)
                      |+|++++.++.++..
T Consensus       198 dvA~~i~~l~~~~~~  212 (230)
T 3guy_A          198 DAALMIHGALANIGN  212 (230)
T ss_dssp             HHHHHHHHHCCEETT
T ss_pred             HHHHHHHHHHhCcCC
Confidence            999999999986543

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.93  E-value=1.4e-24  Score=183.03  Aligned_cols=219  Identities=15%  Similarity=0.067  Sum_probs=158.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcc--cchhhhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDL--SKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      |++|||||+|+||+++++.|+++|++|++..|+....  ......  ......++.++++|+.|.+++.++++       
T Consensus        50 k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  127 (294)
T 3r3s_A           50 RKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKAL--IEECGRKAVLLPGDLSDESFARSLVHKAREALG  127 (294)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHH--HHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHH--HHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            6799999999999999999999999999998874321  111111  11123478899999999988877764       


Q ss_pred             CCCEEEEeccccccC-----CCCchhhhhhhhhHHHHHHHHHHHHhcCCc--cEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           73 GVDGVFHTASPVLVP-----YDNNIQATLIDPCIKGTLNVLSSCKKAKSV--KRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      ++|++|||||.....     ...+.+...+++|+.++.++++++... -.  .+||++||...+.+.+..          
T Consensus       128 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~-~~~~g~Iv~isS~~~~~~~~~~----------  196 (294)
T 3r3s_A          128 GLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPL-LPKGASIITTSSIQAYQPSPHL----------  196 (294)
T ss_dssp             CCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG-CCTTCEEEEECCGGGTSCCTTC----------
T ss_pred             CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH-hhcCCEEEEECChhhccCCCCc----------
Confidence            789999999975421     145667889999999999999998765 32  499999998865543221          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                                 ..|+.||.+.+.+.+.++.++   |+++++++|+.++++......... ..+      ...........
T Consensus       197 -----------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~-~~~------~~~~~~~p~~r  258 (294)
T 3r3s_A          197 -----------LDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQ-DKI------PQFGQQTPMKR  258 (294)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCG-GGS------TTTTTTSTTSS
T ss_pred             -----------hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCH-HHH------HHHHhcCCCCC
Confidence                       679999999999999988775   899999999999987411100000 000      00000111456


Q ss_pred             ceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          223 FVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      +..++|+|+++++++....   .+..+++.|.
T Consensus       259 ~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  290 (294)
T 3r3s_A          259 AGQPAELAPVYVYLASQESSYVTAEVHGVCGG  290 (294)
T ss_dssp             CBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            8899999999999997643   3556888643

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.93  E-value=3.8e-24  Score=179.19  Aligned_cols=219  Identities=18%  Similarity=0.185  Sum_probs=148.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCc-ccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPED-LSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+... ....  .........++.++++|+.|.+++.++++       +
T Consensus        30 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  107 (280)
T 4da9_A           30 PVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPV--IAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGR  107 (280)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHH--HHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSC
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHH--HHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            569999999999999999999999999999974432 2111  11112224578999999999998888776       7


Q ss_pred             CCEEEEeccccc--cC----CCCchhhhhhhhhHHHHHHHHHHHHhcC---C---ccEEEEeccceeeeccCCCCCCccc
Q 039049           74 VDGVFHTASPVL--VP----YDNNIQATLIDPCIKGTLNVLSSCKKAK---S---VKRVVLTSSCSSIRYRHDAQQVSPL  141 (305)
Q Consensus        74 ~d~Vi~~a~~~~--~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~---~~~~v~~SS~~~~~~~~~~~~~~~~  141 (305)
                      +|++|||||...  ..    ...+.+...+++|+.++.++++++...-   +   ..+||++||...+.+.+..      
T Consensus       108 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~------  181 (280)
T 4da9_A          108 IDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPER------  181 (280)
T ss_dssp             CCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CC------
T ss_pred             CCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCc------
Confidence            899999999832  11    1456778899999999999988875430   2   4589999998766543221      


Q ss_pred             CCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCC
Q 039049          142 NESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPN  218 (305)
Q Consensus       142 ~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (305)
                                     ..|+.||.+.+.+.+.++.+   .++++..++|+.+.++........   .......+.     .
T Consensus       182 ---------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~---~~~~~~~~~-----~  238 (280)
T 4da9_A          182 ---------------LDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGK---YDGLIESGL-----V  238 (280)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC---------------------------
T ss_pred             ---------------cHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchh---HHHHHhhcC-----C
Confidence                           66999999999999998877   479999999999988754321110   000010100     1


Q ss_pred             CCccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          219 TTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       219 ~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      ....+..++|+|+++++++....   .+..+++.|.
T Consensus       239 p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  274 (280)
T 4da9_A          239 PMRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGG  274 (280)
T ss_dssp             ---CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTT
T ss_pred             CcCCcCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            14567899999999999997654   2456788654

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.93  E-value=3.6e-24  Score=175.41  Aligned_cols=212  Identities=17%  Similarity=0.183  Sum_probs=154.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|++++|++++..  ..+        ++.++++|+.| +++.++++       ++
T Consensus         3 k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~--~~~--------~~~~~~~D~~~-~~~~~~~~~~~~~~g~i   71 (239)
T 2ekp_A            3 RKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAA--QSL--------GAVPLPTDLEK-DDPKGLVKRALEALGGL   71 (239)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHH--HHH--------TCEEEECCTTT-SCHHHHHHHHHHHHTSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH--Hhh--------CcEEEecCCch-HHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999875311  111        26788999999 77766553       78


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |++|||||......    ..+.+...+++|+.++.++++++.    +. +.++||++||...+.+..             
T Consensus        72 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~-------------  137 (239)
T 2ekp_A           72 HVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEA-GWGRVLFIGSVTTFTAGG-------------  137 (239)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCT-------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECchhhccCCC-------------
Confidence            99999999765322    345677889999999999998874    34 568999999987654320             


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                      ..+.      ..|+.||.+.+.+.+.++.+.   +++++++||+.+.++....... ............+      ...+
T Consensus       138 ~~~~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~p------~~~~  204 (239)
T 2ekp_A          138 PVPI------PAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQ-NPELYEPITARIP------MGRW  204 (239)
T ss_dssp             TSCC------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHT-CHHHHHHHHTTCT------TSSC
T ss_pred             CCCC------ccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhcccc-CHHHHHHHHhcCC------CCCC
Confidence            0011      679999999999999888775   8999999999998875211000 0111122221111      3457


Q ss_pred             eeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          224 VHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      .+++|+|+++++++..+.   .+..+++.|.
T Consensus       205 ~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG  235 (239)
T 2ekp_A          205 ARPEEIARVAAVLCGDEAEYLTGQAVAVDGG  235 (239)
T ss_dssp             BCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHHcCchhcCCCCCEEEECCC
Confidence            899999999999997543   2445677554

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.92  E-value=4.5e-24  Score=176.34  Aligned_cols=217  Identities=16%  Similarity=0.101  Sum_probs=156.5

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcC--CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc------
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKG--HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ------   72 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   72 (305)
                      +|+++||||+|+||+++++.|++.|  +.|++..|+.+......   ...  ..++.++++|+.|.+++.++++      
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~---~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLK---EKY--GDRFFYVVGDITEDSVLKQLVNAAVKGH   76 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHH---HHH--GGGEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHH---HHh--CCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            1789999999999999999999985  78888888765333221   111  3478999999999998888775      


Q ss_pred             -CCCEEEEecccccc-C----CCCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccC
Q 039049           73 -GVDGVFHTASPVLV-P----YDNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLN  142 (305)
Q Consensus        73 -~~d~Vi~~a~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  142 (305)
                       ++|++|||||.... .    ...+.+...+++|+.++.++++++    ++. + .++|++||...+.+.+..       
T Consensus        77 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~-g~iv~isS~~~~~~~~~~-------  147 (254)
T 3kzv_A           77 GKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKT-N-GNVVFVSSDACNMYFSSW-------  147 (254)
T ss_dssp             SCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T-CEEEEECCSCCCCSSCCS-------
T ss_pred             CCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-C-CeEEEEcCchhccCCCCc-------
Confidence             68999999998543 1    145567789999999999999988    444 4 799999998765432211       


Q ss_pred             CCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc-CCcEEEEecCceecCCCCCCCCc------hHHHHHHHHhcCCCC
Q 039049          143 ESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC-GIDMVVVNPSFVVGPLLAPQPTS------TLLLILAMVKGLRGE  215 (305)
Q Consensus       143 E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~i~Rp~~v~G~~~~~~~~~------~~~~~~~~~~~~~~~  215 (305)
                                    ..|+.||...+.+.+.++.+. ++++..++|+.+.++........      ............+  
T Consensus       148 --------------~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  211 (254)
T 3kzv_A          148 --------------GAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKE--  211 (254)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHT--
T ss_pred             --------------chHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHh--
Confidence                          679999999999999998775 89999999999998864432110      1122222222222  


Q ss_pred             CCCCCccceeHHHHHHHHHHhhcccc----cCceEEEecC
Q 039049          216 YPNTTVGFVHIDDVVGAHILAMEETR----ASGRLICSSS  251 (305)
Q Consensus       216 ~~~~~~~~i~v~D~a~~~~~~~~~~~----~~~~~~~~~~  251 (305)
                          ...+.+++|+|+++++++....    .+..+++.++
T Consensus       212 ----~~r~~~p~dva~~v~~L~s~~~~~~itG~~i~vdg~  247 (254)
T 3kzv_A          212 ----NNQLLDSSVPATVYAKLALHGIPDGVNGQYLSYNDP  247 (254)
T ss_dssp             ----TC----CHHHHHHHHHHHHHCCCGGGTTCEEETTCG
T ss_pred             ----cCCcCCcccHHHHHHHHHhhcccCCCCccEEEecCc
Confidence                3558899999999999997653    2445666543

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.92  E-value=1.4e-24  Score=181.95  Aligned_cols=212  Identities=17%  Similarity=0.143  Sum_probs=148.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |++|||||+|+||+++++.|+++|++|++++|+..+...............++.++++|+.|.+++.++++       ++
T Consensus        33 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  112 (279)
T 1xg5_A           33 RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGV  112 (279)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCCCC
Confidence            57999999999999999999999999999999865433221111111112368889999999998887775       78


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHH----HHHHHHHHHhcCCc--cEEEEeccceeeeccCCCCCCcccCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKG----TLNVLSSCKKAKSV--KRVVLTSSCSSIRYRHDAQQVSPLNES  144 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~----~~~l~~~~~~~~~~--~~~v~~SS~~~~~~~~~~~~~~~~~E~  144 (305)
                      |+|||+||......    ..+.+...+++|+.+    ++.++..+++. +.  ++||++||..++...+           
T Consensus       113 D~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~-~~~~g~iv~isS~~~~~~~~-----------  180 (279)
T 1xg5_A          113 DICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKER-NVDDGHIININSMSGHRVLP-----------  180 (279)
T ss_dssp             SEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCCSCEEEEECCGGGTSCCS-----------
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCCceEEEEcChhhcccCC-----------
Confidence            99999999765432    345667789999999    66666666666 54  7999999987542110           


Q ss_pred             CCCCcccccccchhHHHHHHHHHHHHHHHHHH-----cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCC
Q 039049          145 HWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD-----CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNT  219 (305)
Q Consensus       145 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (305)
                        ..+.      ..|+.+|...+.+.+.++.+     .++++++++|+.+.++............+..   ...      
T Consensus       181 --~~~~------~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~---~~~------  243 (279)
T 1xg5_A          181 --LSVT------HFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAA---TYE------  243 (279)
T ss_dssp             --CGGG------HHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHH---HHC------
T ss_pred             --CCCC------chhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHHhh---hcc------
Confidence              0111      66999999999998887755     4799999999999876411000000011111   001      


Q ss_pred             CccceeHHHHHHHHHHhhccccc
Q 039049          220 TVGFVHIDDVVGAHILAMEETRA  242 (305)
Q Consensus       220 ~~~~i~v~D~a~~~~~~~~~~~~  242 (305)
                      ...+++++|+|++++.+++.+..
T Consensus       244 ~~~~~~~~dvA~~i~~l~~~~~~  266 (279)
T 1xg5_A          244 QMKCLKPEDVAEAVIYVLSTPAH  266 (279)
T ss_dssp             ---CBCHHHHHHHHHHHHHSCTT
T ss_pred             cccCCCHHHHHHHHHHHhcCCcc
Confidence            23478999999999999986543

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.92  E-value=2e-24  Score=179.25  Aligned_cols=221  Identities=17%  Similarity=0.134  Sum_probs=151.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||++++++|+++|++|++++|+.++..+...  ..   ..++.++++|+.|.+++.++++       ++
T Consensus        10 k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~--~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   84 (261)
T 3n74_A           10 KVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAG--EI---GDAALAVAADISKEADVDAAVEAALSKFGKV   84 (261)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HH---CTTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH--Hh---CCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            679999999999999999999999999999998754333211  11   3478999999999998888775       68


Q ss_pred             CEEEEeccccccCC-----CCchhhhhhhhhHHHHHHHHHHHHhcC-------CccEEEEeccceeeeccCCCCCCcccC
Q 039049           75 DGVFHTASPVLVPY-----DNNIQATLIDPCIKGTLNVLSSCKKAK-------SVKRVVLTSSCSSIRYRHDAQQVSPLN  142 (305)
Q Consensus        75 d~Vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~-------~~~~~v~~SS~~~~~~~~~~~~~~~~~  142 (305)
                      |++|||||......     ..+.+...+++|+.++.++++++...-       ...+||++||...+.+.+..       
T Consensus        85 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-------  157 (261)
T 3n74_A           85 DILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNL-------  157 (261)
T ss_dssp             CEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTC-------
T ss_pred             CEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCc-------
Confidence            99999999865321     345667789999999999988874330       13479999998754332211       


Q ss_pred             CCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCch-HHHHHHHHhcCCCCCCC
Q 039049          143 ESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTST-LLLILAMVKGLRGEYPN  218 (305)
Q Consensus       143 E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~  218 (305)
                                    ..|+.+|.+.+.+.+.++.+   .+++++.++|+.+.++......... ..........      .
T Consensus       158 --------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~------~  217 (261)
T 3n74_A          158 --------------AWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDS------I  217 (261)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------------C
T ss_pred             --------------cHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhc------C
Confidence                          66999999999999998877   4899999999999887543211100 0001111111      1


Q ss_pred             CCccceeHHHHHHHHHHhhcccc---cCceEEEec-CCcC
Q 039049          219 TTVGFVHIDDVVGAHILAMEETR---ASGRLICSS-SVAH  254 (305)
Q Consensus       219 ~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~-~~~s  254 (305)
                      ....+++++|+|+++++++....   .+..+++.| ..++
T Consensus       218 ~~~~~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~~~  257 (261)
T 3n74_A          218 PMGRLLKPDDLAEAAAFLCSPQASMITGVALDVDGGRSIG  257 (261)
T ss_dssp             TTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTC-
T ss_pred             CcCCCcCHHHHHHHHHHHcCCcccCcCCcEEEecCCcccC
Confidence            14568999999999999997543   355688864 3443

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.92  E-value=1e-24  Score=179.14  Aligned_cols=212  Identities=19%  Similarity=0.200  Sum_probs=156.4

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHH-cCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-----CC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLD-KGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-----GV   74 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----~~   74 (305)
                      ||+++||||+|+||+++++.|++ .|++|++..|+....            ...+.++++|+.|.+++.++++     ++
T Consensus         4 ~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~i   71 (244)
T 4e4y_A            4 MANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS------------AENLKFIKADLTKQQDITNVLDIIKNVSF   71 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC------------CTTEEEEECCTTCHHHHHHHHHHTTTCCE
T ss_pred             CCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc------------cccceEEecCcCCHHHHHHHHHHHHhCCC
Confidence            57899999999999999999999 789999998876521            1257899999999999888876     68


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCCCcccCCCCCCCc
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKAK-SVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDP  149 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~  149 (305)
                      |++|||||......    ..+.+...+++|+.++.++++++...- ...++|++||...+.+.+..              
T Consensus        72 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~--------------  137 (244)
T 4e4y_A           72 DGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKPNS--------------  137 (244)
T ss_dssp             EEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCTTB--------------
T ss_pred             CEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCCCC--------------
Confidence            99999999865432    455677889999999999999987651 12489999998765432211              


Q ss_pred             ccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCc--------hHHHHHHHHhcCCCCCCC
Q 039049          150 DYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTS--------TLLLILAMVKGLRGEYPN  218 (305)
Q Consensus       150 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~--------~~~~~~~~~~~~~~~~~~  218 (305)
                             ..|+.||...+.+.+.++.+   +++++++++|+.+.++........        ............+     
T Consensus       138 -------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-----  205 (244)
T 4e4y_A          138 -------FAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFP-----  205 (244)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTST-----
T ss_pred             -------chhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCC-----
Confidence                   67999999999999988875   489999999999987642110000        0001111111111     


Q ss_pred             CCccceeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          219 TTVGFVHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       219 ~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                       ...+.+++|+|+++++++..+..   +..+++.|.
T Consensus       206 -~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  240 (244)
T 4e4y_A          206 -LNRIAQPQEIAELVIFLLSDKSKFMTGGLIPIDGG  240 (244)
T ss_dssp             -TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -CCCCcCHHHHHHHHHHHhcCccccccCCeEeECCC
Confidence             45688999999999999976543   456777643

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.92  E-value=4.5e-24  Score=178.35  Aligned_cols=217  Identities=15%  Similarity=0.109  Sum_probs=157.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|++.|++|++++|+.+.......  ..   ..++.++++|+.|.+++.++++       ++
T Consensus        30 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~--~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  104 (277)
T 3gvc_A           30 KVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAAT--KI---GCGAAACRVDVSDEQQIIAMVDACVAAFGGV  104 (277)
T ss_dssp             CEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH--HH---CSSCEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--Hc---CCcceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            579999999999999999999999999999998654332211  11   3478899999999988887765       68


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      |++|||||......    ..+.+...+++|+.++.++++++...   .+..+||++||...+.+.+.             
T Consensus       105 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~-------------  171 (277)
T 3gvc_A          105 DKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGG-------------  171 (277)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTT-------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCC-------------
Confidence            99999999875432    45667889999999999999887542   15568999999875443221             


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCC----chHH-HHHHHHhcCCCCCCCC
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPT----STLL-LILAMVKGLRGEYPNT  219 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~  219 (305)
                        .      ..|+.||.+.+.+.+.++.+   +++++++++|+.++++.......    .... ...... ..      .
T Consensus       172 --~------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~------~  236 (277)
T 3gvc_A          172 --T------GAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMI-AR------L  236 (277)
T ss_dssp             --B------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHH-HH------H
T ss_pred             --c------hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhh-hc------c
Confidence              1      67999999999999988876   58999999999999873110000    0000 000000 00      0


Q ss_pred             CccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          220 TVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       220 ~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      ...+.+++|+|+++++++....   .+..+++.|.
T Consensus       237 ~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG  271 (277)
T 3gvc_A          237 QGRMAAPEEMAGIVVFLLSDDASMITGTTQIADGG  271 (277)
T ss_dssp             HSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ccCCCCHHHHHHHHHHHcCCccCCccCcEEEECCc
Confidence            2457899999999999997643   2456888654

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.92  E-value=4.1e-24  Score=178.55  Aligned_cols=219  Identities=14%  Similarity=0.148  Sum_probs=161.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.+........  ......++.++++|+.|.+++.++++       ++
T Consensus        33 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  110 (276)
T 3r1i_A           33 KRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADE--IAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGI  110 (276)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHH--HHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH--HHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            6899999999999999999999999999999987654332221  12223478899999999998888776       78


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CC-ccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KS-VKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~-~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |++|||||......    ..+.+...+++|+.++.++++++...   .+ ..++|++||...+.....            
T Consensus       111 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~------------  178 (276)
T 3r1i_A          111 DIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIP------------  178 (276)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCS------------
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCC------------
Confidence            99999999876532    34566778899999999999887543   02 368999999765432110            


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                       .+.      ..|+.||.+.+.+.+.++.+   .+++++.++|+.+..+.....    ...........+      ...+
T Consensus       179 -~~~------~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~----~~~~~~~~~~~p------~~r~  241 (276)
T 3r1i_A          179 -QQV------SHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPL----ADYHALWEPKIP------LGRM  241 (276)
T ss_dssp             -SCC------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGG----GGGHHHHGGGST------TSSC
T ss_pred             -CCc------chHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccc----hHHHHHHHhcCC------CCCC
Confidence             011      66999999999999999877   589999999999998764321    111112222211      3457


Q ss_pred             eeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          224 VHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      ..++|+|+++++++....   .+..+++.|.
T Consensus       242 ~~pedvA~~v~fL~s~~~~~itG~~i~vdGG  272 (276)
T 3r1i_A          242 GRPEELTGLYLYLASAASSYMTGSDIVIDGG  272 (276)
T ss_dssp             BCGGGSHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHHcCccccCccCcEEEECcC
Confidence            899999999999998644   3456777654

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.92  E-value=1.7e-24  Score=180.74  Aligned_cols=227  Identities=12%  Similarity=-0.004  Sum_probs=162.3

Q ss_pred             CcEEEeCCc--chHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            2 PEYCVTGGT--GFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~~--G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      |+|+||||+  |+||+++++.|+++|++|+++.|+.........+..   ..+++.++++|+.|.+++.++++       
T Consensus        15 k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   91 (271)
T 3ek2_A           15 KRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAA---EFGSELVFPCDVADDAQIDALFASLKTHWD   91 (271)
T ss_dssp             CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHH---HTTCCCEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             CEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHH---HcCCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            789999999  999999999999999999999998543333222222   22358899999999998888775       


Q ss_pred             CCCEEEEecccccc---------CCCCchhhhhhhhhHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCCCcccC
Q 039049           73 GVDGVFHTASPVLV---------PYDNNIQATLIDPCIKGTLNVLSSCKKAK-SVKRVVLTSSCSSIRYRHDAQQVSPLN  142 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~---------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~  142 (305)
                      ++|++|||||....         ....+.+...+++|+.++.++++++...- ...++|++||...+.+.+..       
T Consensus        92 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------  164 (271)
T 3ek2_A           92 SLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIPNY-------  164 (271)
T ss_dssp             CEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTT-------
T ss_pred             CCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCCCc-------
Confidence            67999999998653         12455677899999999999999986541 23489999998765432211       


Q ss_pred             CCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCC
Q 039049          143 ESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNT  219 (305)
Q Consensus       143 E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (305)
                                    ..|+.||.+.+.+.+.++.++   ++++++++|+.+..+..... ..............+      
T Consensus       165 --------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~------  223 (271)
T 3ek2_A          165 --------------NTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGI-KSFGKILDFVESNSP------  223 (271)
T ss_dssp             --------------THHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCC-HHHHHHHHHHHHHST------
T ss_pred             --------------cchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcc-cchHHHHHHHHhcCC------
Confidence                          669999999999999888764   89999999999998754321 111222333333322      


Q ss_pred             CccceeHHHHHHHHHHhhcccc---cCceEEEe-cCCcCHHHHH
Q 039049          220 TVGFVHIDDVVGAHILAMEETR---ASGRLICS-SSVAHWSPII  259 (305)
Q Consensus       220 ~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~-~~~~s~~el~  259 (305)
                      ...+..++|+|+++++++....   .+..+++. |..+++.+++
T Consensus       224 ~~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~~  267 (271)
T 3ek2_A          224 LKRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGMA  267 (271)
T ss_dssp             TSSCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC-
T ss_pred             cCCCCCHHHHHHHHHHHcCcccCCeeeeEEEECCCeeeehhhhh
Confidence            3457899999999999998643   24567885 4455555543

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.92  E-value=1.3e-24  Score=184.32  Aligned_cols=222  Identities=13%  Similarity=0.095  Sum_probs=156.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchh-hhhhcc--CccCceEEEEccCCCcchHHHHhc------
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVG-FLWELN--GAEERLKIMKADLLMEGSFDEAIQ------   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~--~~~~~~~~~~~D~~d~~~~~~~~~------   72 (305)
                      ++|+||||+|+||+++++.|+++|++|++++|+.+...... .+....  ....++.++++|+.|.+++.++++      
T Consensus        19 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   98 (303)
T 1yxm_A           19 QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTF   98 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHHHc
Confidence            67999999999999999999999999999999865332211 111100  123478999999999998888775      


Q ss_pred             -CCCEEEEeccccccC----CCCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCC
Q 039049           73 -GVDGVFHTASPVLVP----YDNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNES  144 (305)
Q Consensus        73 -~~d~Vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~  144 (305)
                       ++|+||||||.....    ...+.+...+++|+.++.++++++...   .+.++||++||.. +.+.+.          
T Consensus        99 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~----------  167 (303)
T 1yxm_A           99 GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPL----------  167 (303)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTT----------
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCCc----------
Confidence             589999999965432    134456778999999999999987552   1346899999976 322111          


Q ss_pred             CCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCc-hHHHHHHHHhcCCCCCCCCC
Q 039049          145 HWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTS-TLLLILAMVKGLRGEYPNTT  220 (305)
Q Consensus       145 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  220 (305)
                           .      ..|+.+|...+.+.+.++++.   +++++++||+.++|+........ ....+.......      ..
T Consensus       168 -----~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~------p~  230 (303)
T 1yxm_A          168 -----A------VHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKI------PA  230 (303)
T ss_dssp             -----C------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGS------TT
T ss_pred             -----c------hhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcC------cc
Confidence                 1      669999999999999988775   89999999999999842111110 000001111111      13


Q ss_pred             ccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          221 VGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       221 ~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      ..+.+++|+|++++.++....   .+..+++.+.
T Consensus       231 ~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~gG  264 (303)
T 1yxm_A          231 KRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGG  264 (303)
T ss_dssp             SSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCCCCHHHHHHHHHHHhCcccccCCCcEEEECCC
Confidence            458899999999999997643   2456778654

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.92  E-value=8.6e-24  Score=176.06  Aligned_cols=208  Identities=16%  Similarity=0.173  Sum_probs=156.6

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcC---CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-----
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKG---HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-----   72 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   72 (305)
                      |++|+||||+|+||+++++.|++.|   ++|++++|+.........+..   ...++.++.+|+.|.+++.++++     
T Consensus        21 ~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   97 (267)
T 1sny_A           21 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAK---NHSNIHILEIDLRNFDAYDKLVADIEGV   97 (267)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHH---HCTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred             CCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhc---cCCceEEEEecCCChHHHHHHHHHHHHh
Confidence            5789999999999999999999999   999999998765443322221   13478999999999999888876     


Q ss_pred             ----CCCEEEEeccccc-c----CCCCchhhhhhhhhHHHHHHHHHHHHhc----------CC----ccEEEEeccceee
Q 039049           73 ----GVDGVFHTASPVL-V----PYDNNIQATLIDPCIKGTLNVLSSCKKA----------KS----VKRVVLTSSCSSI  129 (305)
Q Consensus        73 ----~~d~Vi~~a~~~~-~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~----~~~~v~~SS~~~~  129 (305)
                          ++|+||||||... .    ....+.+...+++|+.++.++++++...          ++    .++||++||...+
T Consensus        98 ~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~  177 (267)
T 1sny_A           98 TKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGS  177 (267)
T ss_dssp             HGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGC
T ss_pred             cCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEeccccc
Confidence                7999999999865 2    1234566778999999999999988543          10    4689999998765


Q ss_pred             eccCCCCCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHH
Q 039049          130 RYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLIL  206 (305)
Q Consensus       130 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~  206 (305)
                      .....            ..+.      ..|+.+|.+.+.+.+.++.+   .+++++++||+.+..+....          
T Consensus       178 ~~~~~------------~~~~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----------  229 (267)
T 1sny_A          178 IQGNT------------DGGM------YAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS----------  229 (267)
T ss_dssp             STTCC------------SCCC------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT----------
T ss_pred             ccCCC------------CCCc------hHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC----------
Confidence            43210            0011      66999999999999988877   58999999999997764311          


Q ss_pred             HHHhcCCCCCCCCCccceeHHHHHHHHHHhhcccc--cCceE-EEecCCc
Q 039049          207 AMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETR--ASGRL-ICSSSVA  253 (305)
Q Consensus       207 ~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~-~~~~~~~  253 (305)
                                    ..++.++|+|+.++.++....  ..+.| ...|..+
T Consensus       230 --------------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~~  265 (267)
T 1sny_A          230 --------------SAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDGTPL  265 (267)
T ss_dssp             --------------TCSBCHHHHHHHHHHHHHHCCGGGTTCEECTTSCBC
T ss_pred             --------------CCCCCHHHHHHHHHHHHHhcCcCCCCcEEccCCcCc
Confidence                          124788999999999997643  23444 3344433

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.92  E-value=5.3e-24  Score=176.39  Aligned_cols=221  Identities=16%  Similarity=0.124  Sum_probs=153.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|+++.++...... ...........++.++++|+.|.+++.++++       ++
T Consensus         9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   87 (259)
T 3edm_A            9 RTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAA-TAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGEI   87 (259)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHH-HHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCSE
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHH-HHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            579999999999999999999999999998665432211 1111222224578999999999998888775       68


Q ss_pred             CEEEEecccccc-C----CCCchhhhhhhhhHHHHHHHHHHHHhcCCc--cEEEEeccceee-eccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLV-P----YDNNIQATLIDPCIKGTLNVLSSCKKAKSV--KRVVLTSSCSSI-RYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~v~~SS~~~~-~~~~~~~~~~~~~E~~~  146 (305)
                      |++|||||.... .    ...+.+...+++|+.++.++++++... -.  .++|++||...+ .+.+.            
T Consensus        88 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~-~~~~g~iv~isS~~~~~~~~~~------------  154 (259)
T 3edm_A           88 HGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPK-MAKGGAIVTFSSQAGRDGGGPG------------  154 (259)
T ss_dssp             EEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGG-EEEEEEEEEECCHHHHHCCSTT------------
T ss_pred             CEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCEEEEEcCHHhccCCCCC------------
Confidence            999999997622 1    134556788999999999999998765 32  389999998765 22111            


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHcC--CcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccce
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCG--IDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFV  224 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  224 (305)
                               ...|+.||.+.+.+.+.++.+.+  +++..++|+.+..+.......  ..........      .....+.
T Consensus       155 ---------~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~------~p~~r~~  217 (259)
T 3edm_A          155 ---------ALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTK--PEVRERVAGA------TSLKREG  217 (259)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC------------------------------CCB
T ss_pred             ---------cHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccC--hHHHHHHHhc------CCCCCCc
Confidence                     16799999999999999987764  999999999998875332110  0011111111      1145678


Q ss_pred             eHHHHHHHHHHhhcccc---cCceEEEecCCc
Q 039049          225 HIDDVVGAHILAMEETR---ASGRLICSSSVA  253 (305)
Q Consensus       225 ~v~D~a~~~~~~~~~~~---~~~~~~~~~~~~  253 (305)
                      +++|+|+++++++....   .+..+++.|...
T Consensus       218 ~pedva~~v~~L~s~~~~~itG~~i~vdGg~~  249 (259)
T 3edm_A          218 SSEDVAGLVAFLASDDAAYVTGACYDINGGVL  249 (259)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESBCSS
T ss_pred             CHHHHHHHHHHHcCccccCccCCEEEECCCcC
Confidence            99999999999997654   355688876543

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.92  E-value=7.6e-24  Score=177.08  Aligned_cols=219  Identities=12%  Similarity=0.052  Sum_probs=158.7

Q ss_pred             CcEEEeCCc--chHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            2 PEYCVTGGT--GFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~~--G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      |+++||||+  |+||+++++.|+++|++|++++|+.........+...   .+++.++++|+.|.+++.++++       
T Consensus         7 k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   83 (275)
T 2pd4_A            7 KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQE---LNSPYVYELDVSKEEHFKSLYNSVKKDLG   83 (275)
T ss_dssp             CEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHH---TTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCcEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            679999999  9999999999999999999999987522222222211   1247889999999998887765       


Q ss_pred             CCCEEEEecccccc--------CCCCchhhhhhhhhHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCCCcccCC
Q 039049           73 GVDGVFHTASPVLV--------PYDNNIQATLIDPCIKGTLNVLSSCKKAK-SVKRVVLTSSCSSIRYRHDAQQVSPLNE  143 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~E  143 (305)
                      ++|++|||||....        ....+.+...+++|+.++.++++++...- ...+||++||...+.+.+.         
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~---------  154 (275)
T 2pd4_A           84 SLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAH---------  154 (275)
T ss_dssp             CEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT---------
T ss_pred             CCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCCCC---------
Confidence            67999999997653        22455677899999999999999987641 1258999999765432211         


Q ss_pred             CCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCC
Q 039049          144 SHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTT  220 (305)
Q Consensus       144 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (305)
                            .      ..|+.||.+.+.+.+.++.++   ++++++++|+.+.++..... ..............+      .
T Consensus       155 ------~------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~p------~  215 (275)
T 2pd4_A          155 ------Y------NVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGI-ADFRMILKWNEINAP------L  215 (275)
T ss_dssp             ------C------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGS-TTHHHHHHHHHHHST------T
T ss_pred             ------c------hhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhc-cccHHHHHHHHhcCC------c
Confidence                  1      669999999999999888775   89999999999998753321 111222222222222      2


Q ss_pred             ccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          221 VGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       221 ~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      ..+.+++|+|+++++++....   .+..+++.+.
T Consensus       216 ~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgg  249 (275)
T 2pd4_A          216 RKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAG  249 (275)
T ss_dssp             SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            346789999999999997543   2445677544

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.92  E-value=4.2e-24  Score=177.79  Aligned_cols=219  Identities=16%  Similarity=0.098  Sum_probs=156.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchh-hhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVG-FLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |+++||||+|+||+++++.|++.|++|++++|+.+...... .+..  ....++.++++|+.|.+++.++++       +
T Consensus        22 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   99 (267)
T 1vl8_A           22 RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTE--KYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK   99 (267)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH--HHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH--hcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            67999999999999999999999999999999865332211 1101  113368889999999998887775       6


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccce-eeeccCCCCCCcccCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCS-SIRYRHDAQQVSPLNES  144 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~-~~~~~~~~~~~~~~~E~  144 (305)
                      +|+||||||......    ..+.+...+++|+.++.++++++.    +. +.++||++||.. ...+.+           
T Consensus       100 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~~~~~-----------  167 (267)
T 1vl8_A          100 LDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRES-DNPSIINIGSLTVEEVTMP-----------  167 (267)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTC-SSCEEEEECCGGGTCCCSS-----------
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEECCcchhccCCC-----------
Confidence            899999999865432    344567789999999999988874    33 567999999976 221111           


Q ss_pred             CCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCc
Q 039049          145 HWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTV  221 (305)
Q Consensus       145 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (305)
                          +.      ..|+.+|...+.+.+.++.+   .++++++++|+.+.++....... ............+      ..
T Consensus       168 ----~~------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p------~~  230 (267)
T 1vl8_A          168 ----NI------SAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFS-DPEKLDYMLKRIP------LG  230 (267)
T ss_dssp             ----SC------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHT-CHHHHHHHHHTCT------TS
T ss_pred             ----CC------hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccccccccc-ChHHHHHHHhhCC------CC
Confidence                11      67999999999999988876   48999999999998774211000 0111122222211      23


Q ss_pred             cceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          222 GFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      .+++++|+|+++++++....   .+..+.+.|.
T Consensus       231 ~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  263 (267)
T 1vl8_A          231 RTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGG  263 (267)
T ss_dssp             SCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCcCHHHHHHHHHHHcCccccCCcCCeEEECCC
Confidence            57899999999999997643   2445666543

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.92  E-value=6e-24  Score=176.90  Aligned_cols=220  Identities=15%  Similarity=0.082  Sum_probs=156.3

Q ss_pred             CcEEEeCCcc-hHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTG-FIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G-~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |+++||||+| .||++++++|+++|++|++++|+.+.......... .....++.++++|+.|.+++.++++       +
T Consensus        23 k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~-~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  101 (266)
T 3o38_A           23 KVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLA-DLGLGRVEAVVCDVTSTEAVDALITQTVEKAGR  101 (266)
T ss_dssp             CEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH-TTCSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHH-hcCCCceEEEEeCCCCHHHHHHHHHHHHHHhCC
Confidence            6799999998 59999999999999999999998764333221111 1113479999999999998888765       6


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA----KSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|+||||||......    ..+.+...+++|+.++.++++++...    ++..+||++||...+.+.+.           
T Consensus       102 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-----------  170 (266)
T 3o38_A          102 LDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHS-----------  170 (266)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTT-----------
T ss_pred             CcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCC-----------
Confidence            799999999865432    44567778999999999999987553    14468999999875443211           


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                          .      ..|+.+|.+.+.+.+.++.+   .++++.+++|+.+.++.......  ..........      .....
T Consensus       171 ----~------~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~------~~~~r  232 (266)
T 3o38_A          171 ----Q------SHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSS--SELLDRLASD------EAFGR  232 (266)
T ss_dssp             ----C------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-------------------C------CTTSS
T ss_pred             ----C------chHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCc--HHHHHHHHhc------CCcCC
Confidence                1      67999999999999988877   58999999999998875322111  0111111111      11466


Q ss_pred             ceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          223 FVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      +.+++|+|+++++++....   .+..++++++
T Consensus       233 ~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG  264 (266)
T 3o38_A          233 AAEPWEVAATIAFLASDYSSYMTGEVVSVSSQ  264 (266)
T ss_dssp             CCCHHHHHHHHHHHHSGGGTTCCSCEEEESSC
T ss_pred             CCCHHHHHHHHHHHcCccccCccCCEEEEcCC
Confidence            8899999999999998643   2445777543

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.92  E-value=3.4e-24  Score=179.70  Aligned_cols=224  Identities=16%  Similarity=0.164  Sum_probs=157.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccC---ceEEEEccCCCcchHHHHhc------
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEE---RLKIMKADLLMEGSFDEAIQ------   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~D~~d~~~~~~~~~------   72 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.+.......  .......   ++.++++|+.|.+++.++++      
T Consensus         7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (280)
T 1xkq_A            7 KTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQ--IILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   84 (280)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--HHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            679999999999999999999999999999998654332211  1111122   68899999999998887765      


Q ss_pred             -CCCEEEEeccccccCC--------CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeecc-CCCCCCc
Q 039049           73 -GVDGVFHTASPVLVPY--------DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYR-HDAQQVS  139 (305)
Q Consensus        73 -~~d~Vi~~a~~~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~-~~~~~~~  139 (305)
                       ++|+||||||......        ..+.+...+++|+.++.++++++...   .+ ++||++||...+.+. +.     
T Consensus        85 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~-----  158 (280)
T 1xkq_A           85 GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPD-----  158 (280)
T ss_dssp             SCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCS-----
T ss_pred             CCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCCCc-----
Confidence             6899999999764321        34557788999999999999987643   14 799999998754321 11     


Q ss_pred             ccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCC-CchHH-HHHHHHhcCCC
Q 039049          140 PLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQP-TSTLL-LILAMVKGLRG  214 (305)
Q Consensus       140 ~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~-~~~~~-~~~~~~~~~~~  214 (305)
                                .      ..|+.||.+.+.+.+.++.+   +++++++++|+.++++...... ..... -..........
T Consensus       159 ----------~------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  222 (280)
T 1xkq_A          159 ----------F------LYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKE  222 (280)
T ss_dssp             ----------S------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTT
T ss_pred             ----------c------cHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHc
Confidence                      1      67999999999999888765   4899999999999987532110 00000 00011111000


Q ss_pred             CCCCCCccceeHHHHHHHHHHhhccc-c---cCceEEEecC
Q 039049          215 EYPNTTVGFVHIDDVVGAHILAMEET-R---ASGRLICSSS  251 (305)
Q Consensus       215 ~~~~~~~~~i~v~D~a~~~~~~~~~~-~---~~~~~~~~~~  251 (305)
                      ..+  ...+.+++|+|+++++++..+ .   .+..+++.|.
T Consensus       223 ~~p--~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG  261 (280)
T 1xkq_A          223 CIP--IGAAGKPEHIANIILFLADRNLSFYILGQSIVADGG  261 (280)
T ss_dssp             TCT--TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred             CCC--CCCCCCHHHHHHHHHHhcCcccccCccCCeEEECCC
Confidence            011  346899999999999999764 2   3456777654

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.92  E-value=1.4e-24  Score=183.31  Aligned_cols=240  Identities=14%  Similarity=0.145  Sum_probs=164.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchh-hhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVG-FLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.++..... .+........++.++++|+.|++++.++++       +
T Consensus        27 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  106 (297)
T 1xhl_A           27 KSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGK  106 (297)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence            57999999999999999999999999999999865433221 111110001168899999999998888775       7


Q ss_pred             CCEEEEeccccccCC------CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeecc-CCCCCCcccCC
Q 039049           74 VDGVFHTASPVLVPY------DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYR-HDAQQVSPLNE  143 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~-~~~~~~~~~~E  143 (305)
                      +|+||||||......      ..+.+...+++|+.++.++++++...   .+ ++||++||...+.+. +.         
T Consensus       107 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~~~---------  176 (297)
T 1xhl_A          107 IDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSG---------  176 (297)
T ss_dssp             CCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTT---------
T ss_pred             CCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCCCC---------
Confidence            899999999764321      34567789999999999999887643   14 799999998754321 11         


Q ss_pred             CCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCC-CchHHH-HHHHHhcCCCCCCC
Q 039049          144 SHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQP-TSTLLL-ILAMVKGLRGEYPN  218 (305)
Q Consensus       144 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~-~~~~~~-~~~~~~~~~~~~~~  218 (305)
                            .      ..|+.+|.+.+.+.+.++.+   .|+++++++|+.+.++...... ...... ............+ 
T Consensus       177 ------~------~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p-  243 (297)
T 1xhl_A          177 ------Y------PYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIP-  243 (297)
T ss_dssp             ------S------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCT-
T ss_pred             ------c------chHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCC-
Confidence                  1      66999999999999888765   5899999999999987422110 000000 0011111000011 


Q ss_pred             CCccceeHHHHHHHHHHhhccc----ccCceEEEec-CCcCHHHHHHHHHHh
Q 039049          219 TTVGFVHIDDVVGAHILAMEET----RASGRLICSS-SVAHWSPIIEMLKAT  265 (305)
Q Consensus       219 ~~~~~i~v~D~a~~~~~~~~~~----~~~~~~~~~~-~~~s~~el~~~i~~~  265 (305)
                       ...+..++|+|+++++++..+    ..+..+++.| ......+.+..+.+.
T Consensus       244 -~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~  294 (297)
T 1xhl_A          244 -VGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDLMSV  294 (297)
T ss_dssp             -TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCHHHH
T ss_pred             -CCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCccccccccccchhhh
Confidence             345899999999999999764    2355677754 455555544444443

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.92  E-value=4.2e-24  Score=176.83  Aligned_cols=217  Identities=15%  Similarity=0.119  Sum_probs=159.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEe-CCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVR-DPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |+||||||+|+||++++++|+++|++|+++.+ +.......  .........++.++++|+.|.+++.++++       +
T Consensus        14 k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   91 (256)
T 3ezl_A           14 RIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKW--LEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVGE   91 (256)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHH--HHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH--HHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence            68999999999999999999999999999884 44332221  11111223478999999999988888775       6


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|+|||+||......    ..+.+...+++|+.++.++.+.+    ++. +..+||++||...+.+....          
T Consensus        92 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~----------  160 (256)
T 3ezl_A           92 IDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVER-GWGRIINISSVNGQKGQFGQ----------  160 (256)
T ss_dssp             EEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCCCGGGSCSCC----------
T ss_pred             CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEEcchhhccCCCCC----------
Confidence            799999999876432    34567789999999988887776    344 56799999998765432211          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                                 ..|+.||.+.+.+.+.++.+   .++++.+++|+.+.++.....   ............+      ...
T Consensus       161 -----------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~~------~~~  220 (256)
T 3ezl_A          161 -----------TNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI---RPDVLEKIVATIP------VRR  220 (256)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS---CHHHHHHHHHHST------TSS
T ss_pred             -----------cccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcccccc---CHHHHHHHHhcCC------CCC
Confidence                       67999999999999888876   489999999999987753221   1222333333322      355


Q ss_pred             ceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          223 FVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      +.+++|+|+++.+++....   .+..+++.|.
T Consensus       221 ~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG  252 (256)
T 3ezl_A          221 LGSPDEIGSIVAWLASEESGFSTGADFSLNGG  252 (256)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHhCCcccCCcCcEEEECCC
Confidence            7899999999999987543   2456788654

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.92  E-value=2.7e-24  Score=179.75  Aligned_cols=216  Identities=15%  Similarity=0.131  Sum_probs=155.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.+......  ..... ..++.++++|+.|.+++.++++       ++
T Consensus        30 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~--~~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (276)
T 2b4q_A           30 RIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTA--TRLSA-YGDCQAIPADLSSEAGARRLAQALGELSARL  106 (276)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH--HHHTT-SSCEEECCCCTTSHHHHHHHHHHHHHHCSCC
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--HHHHh-cCceEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            67999999999999999999999999999999865332211  11111 1268889999999988887775       68


Q ss_pred             CEEEEeccccccC----CCCchhhhhhhhhHHHHHHHHHHHH----hcCCc----cEEEEeccceeeeccCCCCCCcccC
Q 039049           75 DGVFHTASPVLVP----YDNNIQATLIDPCIKGTLNVLSSCK----KAKSV----KRVVLTSSCSSIRYRHDAQQVSPLN  142 (305)
Q Consensus        75 d~Vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~----~~~v~~SS~~~~~~~~~~~~~~~~~  142 (305)
                      |+||||||.....    ...+.+...+++|+.++.++++++.    +. +.    ++||++||...+.+.+..       
T Consensus       107 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~~~~~g~iV~isS~~~~~~~~~~-------  178 (276)
T 2b4q_A          107 DILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRS-ASAENPARVINIGSVAGISAMGEQ-------  178 (276)
T ss_dssp             SEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHH-CCSSSCEEEEEECCGGGTCCCCCS-------
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-cCCCCCCEEEEECCHHHcCCCCCC-------
Confidence            9999999976542    1455677899999999988888764    33 33    799999998765432110       


Q ss_pred             CCCCCCcccccccch-hHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHh--cCCCCC
Q 039049          143 ESHWSDPDYCKHYNL-WYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVK--GLRGEY  216 (305)
Q Consensus       143 E~~~~~~~~~~~~~~-~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~--~~~~~~  216 (305)
                                    . .|+.||...+.+.+.++.+.   ++++++++|+.+.++.....   ..........  ..+   
T Consensus       179 --------------~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~~~p---  238 (276)
T 2b4q_A          179 --------------AYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHI---ANDPQALEADSASIP---  238 (276)
T ss_dssp             --------------CTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHH---HHCHHHHHHHHHTST---
T ss_pred             --------------ccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhc---chhHHHHHHhhcCCC---
Confidence                          3 69999999999999888764   89999999999988752110   0001111111  111   


Q ss_pred             CCCCccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          217 PNTTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       217 ~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                         ...+.+++|+|+++++++..+.   .+..+++.|.
T Consensus       239 ---~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  273 (276)
T 2b4q_A          239 ---MGRWGRPEEMAALAISLAGTAGAYMTGNVIPIDGG  273 (276)
T ss_dssp             ---TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ---CCCcCCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence               3458899999999999997643   2445777543

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.92  E-value=1.5e-24  Score=184.97  Aligned_cols=217  Identities=18%  Similarity=0.110  Sum_probs=147.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++||||||+|+||+++++.|+++|++|++++|+.++...............++.++++|+.|.+++.++++       ++
T Consensus         9 k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   88 (319)
T 3ioy_A            9 RTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGPV   88 (319)
T ss_dssp             CEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTCCE
T ss_pred             CEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCCCC
Confidence            47999999999999999999999999999999876544322211112223378999999999998888775       57


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhcC---------CccEEEEeccceeeeccCCCCCCccc
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKAK---------SVKRVVLTSSCSSIRYRHDAQQVSPL  141 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~---------~~~~~v~~SS~~~~~~~~~~~~~~~~  141 (305)
                      |+||||||......    ..+.+...+++|+.++.++++++....         +..+||++||...+.+.+..      
T Consensus        89 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~~------  162 (319)
T 3ioy_A           89 SILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSP------  162 (319)
T ss_dssp             EEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSSS------
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCCC------
Confidence            99999999765432    445677899999999999999875530         23579999998865543221      


Q ss_pred             CCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhc---CCC-
Q 039049          142 NESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKG---LRG-  214 (305)
Q Consensus       142 ~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~---~~~-  214 (305)
                                     ..|+.||.+.+.+.+.++.+   .++++++++|+.|.++......... ..+......   ... 
T Consensus       163 ---------------~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~~~~~  226 (319)
T 3ioy_A          163 ---------------GIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRP-DALKGEVKPVDKTAVE  226 (319)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC----------------------------
T ss_pred             ---------------HHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCc-hhhcccccchhHHHHH
Confidence                           66999999777777666544   4899999999999887643221110 000000000   000 


Q ss_pred             CCCCCCccceeHHHHHHHHHHhhccc
Q 039049          215 EYPNTTVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       215 ~~~~~~~~~i~v~D~a~~~~~~~~~~  240 (305)
                      .+.......++++|+|++++.+++++
T Consensus       227 ~~~~~~~~~~~pe~vA~~~~~al~~~  252 (319)
T 3ioy_A          227 RLAGVHEFGMEPDVIGARVIEAMKAN  252 (319)
T ss_dssp             --CCGGGSSBCHHHHHHHHHHHHHTT
T ss_pred             HHHHhhhcCCCHHHHHHHHHHHHHcC
Confidence            01111222389999999999999874

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.92  E-value=2.4e-24  Score=177.26  Aligned_cols=216  Identities=18%  Similarity=0.165  Sum_probs=158.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.+.......  ..   ..++.++++|+.|.+++.++++       ++
T Consensus         7 k~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~--~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   81 (247)
T 3rwb_A            7 KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAA--SI---GKKARAIAADISDPGSVKALFAEIQALTGGI   81 (247)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH--HH---CTTEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--Hh---CCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence            689999999999999999999999999999998654332211  11   3478899999999998888775       78


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |++|||||......    ..+.+...+++|+.++.++.+++    ++.+...++|++||...+.+.+..           
T Consensus        82 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----------  150 (247)
T 3rwb_A           82 DILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNM-----------  150 (247)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTC-----------
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCc-----------
Confidence            99999999875432    45567889999999999999884    444225799999998765443221           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                                ..|+.||...+.+.+.++.+   ++++++.++|+.+.++............+....  .+      ...+
T Consensus       151 ----------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~--~~------~~r~  212 (247)
T 3rwb_A          151 ----------AAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEML--QA------MKGK  212 (247)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHH--SS------SCSC
T ss_pred             ----------hhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcc--cc------cCCC
Confidence                      67999999999999988877   589999999999987642211111111111110  11      3446


Q ss_pred             eeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          224 VHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      ..++|+|+++.+++.....   +..+++.|.
T Consensus       213 ~~pedva~~v~~L~s~~~~~itG~~i~vdGG  243 (247)
T 3rwb_A          213 GQPEHIADVVSFLASDDARWITGQTLNVDAG  243 (247)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            8899999999999976533   456777654

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.92  E-value=6.2e-24  Score=174.77  Aligned_cols=206  Identities=17%  Similarity=0.174  Sum_probs=150.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+|+||||+|+||+++++.|+++|++|++++|+++....             +..+++|+.|++++.++++       ++
T Consensus        16 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-------------~~~~~~D~~~~~~~~~~~~~~~~~~g~i   82 (247)
T 1uzm_A           16 RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG-------------LFGVEVDVTDSDAVDRAFTAVEEHQGPV   82 (247)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-------------SEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH-------------hcCeeccCCCHHHHHHHHHHHHHHcCCC
Confidence            679999999999999999999999999999998654321             1237899999988887765       57


Q ss_pred             CEEEEeccccccC----CCCchhhhhhhhhHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVP----YDNNIQATLIDPCIKGTLNVLSSCKK----AKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |++|||||.....    ...+.+...+++|+.++.++++++..    . +.++||++||...+.+.+.            
T Consensus        83 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~------------  149 (247)
T 1uzm_A           83 EVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN-KFGRMIFIGSVSGLWGIGN------------  149 (247)
T ss_dssp             SEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCCCC-----C------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCEEEEECCHhhccCCCC------------
Confidence            9999999986532    24556788999999999999988753    3 5689999999876543211            


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                         .      ..|+.||...+.+.+.++.+   .++++++++|+.+.++..... .  ...........+      ...+
T Consensus       150 ---~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~--~~~~~~~~~~~p------~~~~  211 (247)
T 1uzm_A          150 ---Q------ANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL-D--ERIQQGALQFIP------AKRV  211 (247)
T ss_dssp             ---C------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS-C--HHHHHHHGGGCT------TCSC
T ss_pred             ---C------hhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhc-C--HHHHHHHHhcCC------CCCC
Confidence               1      67999999999999888776   489999999999977632110 0  111111111111      3458


Q ss_pred             eeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          224 VHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      .+++|+|+++++++..+.   .+..+++.|.
T Consensus       212 ~~~~dvA~~~~~l~s~~~~~~~G~~i~vdgG  242 (247)
T 1uzm_A          212 GTPAEVAGVVSFLASEDASYISGAVIPVDGG  242 (247)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHHcCccccCCcCCEEEECCC
Confidence            999999999999997543   3445777654

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.92  E-value=1.3e-24  Score=180.04  Aligned_cols=222  Identities=14%  Similarity=0.130  Sum_probs=147.5

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcC----CCE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQG----VDG   76 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~----~d~   76 (305)
                      ||+|+||||+|+||+++++.|+++|++|++++|+.++...              . +++|+.|.+++.+++++    +|+
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~--------------~-~~~Dl~~~~~v~~~~~~~~~~id~   65 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA--------------D-LSTAEGRKQAIADVLAKCSKGMDG   65 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC--------------C-TTSHHHHHHHHHHHHTTCTTCCSE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc--------------c-cccCCCCHHHHHHHHHHhCCCCCE
Confidence            8899999999999999999999999999999998754321              1 56899999999988864    599


Q ss_pred             EEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCC-CcccCCCC-------
Q 039049           77 VFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQ-VSPLNESH-------  145 (305)
Q Consensus        77 Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~-~~~~~E~~-------  145 (305)
                      ||||||....   ...+...+++|+.++.++++++...   .+.++||++||...+......+. ...+.+.+       
T Consensus        66 lv~~Ag~~~~---~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (257)
T 1fjh_A           66 LVLCAGLGPQ---TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAI  142 (257)
T ss_dssp             EEECCCCCTT---CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHH
T ss_pred             EEECCCCCCC---cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhh
Confidence            9999998651   2347789999999999999988531   25679999999887632110000 00000110       


Q ss_pred             ----CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCC
Q 039049          146 ----WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPN  218 (305)
Q Consensus       146 ----~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (305)
                          .+.+     ....|+.||.+.+.+.+.++.+   .++++++++|+.+.++........  .........    +..
T Consensus       143 ~~~~~~~~-----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~----~~~  211 (257)
T 1fjh_A          143 VEHAGEQG-----GNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQD--PRYGESIAK----FVP  211 (257)
T ss_dssp             HHTCCTTH-----HHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------------CCC
T ss_pred             hhcccCCC-----CccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccc--hhHHHHHHh----ccc
Confidence                1111     1167999999999999888766   589999999999998764321000  000111110    011


Q ss_pred             CCccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          219 TTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       219 ~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      ....+++++|+|+++++++..+.   .+..+++.|.
T Consensus       212 ~~~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG  247 (257)
T 1fjh_A          212 PMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGG  247 (257)
T ss_dssp             STTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             ccCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECCC
Confidence            13357999999999999998653   2445677654

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.92  E-value=4.3e-24  Score=176.19  Aligned_cols=208  Identities=14%  Similarity=0.111  Sum_probs=145.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc------CCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ------GVD   75 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------~~d   75 (305)
                      ++++||||+|+||+++++.|+++|++|++++|+.+........  ......++.++++|+.|.+++.++++      ++|
T Consensus         8 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id   85 (252)
T 3h7a_A            8 ATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAE--IEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLE   85 (252)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHH--HHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH--HHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCce
Confidence            6799999999999999999999999999999987654433221  11124478999999999999888876      679


Q ss_pred             EEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           76 GVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        76 ~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      ++|||||......    ..+.+...+++|+.++.++.+++.    +. +..+||++||...+.+.+..            
T Consensus        86 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~------------  152 (252)
T 3h7a_A           86 VTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAH-GQGKIFFTGATASLRGGSGF------------  152 (252)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEEGGGTCCCTTC------------
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECCHHHcCCCCCC------------
Confidence            9999999866432    455677889999999999988873    34 45799999998755432211            


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcE-EEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDM-VVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~-~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                               ..|+.||.+.+.+.+.++.+.   ++++ .+++||.+..+........   ........      .... +
T Consensus       153 ---------~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~---~~~~~~~~------~~~~-~  213 (252)
T 3h7a_A          153 ---------AAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQ---MFGKDALA------NPDL-L  213 (252)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------------------
T ss_pred             ---------ccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchh---hhhhhhhc------CCcc-C
Confidence                     679999999999999888774   7999 8999999987653321110   00000000      1133 8


Q ss_pred             eeHHHHHHHHHHhhcccccC
Q 039049          224 VHIDDVVGAHILAMEETRAS  243 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~~~  243 (305)
                      .+++|+|++++++++.+...
T Consensus       214 ~~pedvA~~~~~l~s~~~~~  233 (252)
T 3h7a_A          214 MPPAAVAGAYWQLYQQPKSA  233 (252)
T ss_dssp             CCHHHHHHHHHHHHHCCGGG
T ss_pred             CCHHHHHHHHHHHHhCchhc
Confidence            99999999999999876553

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.92  E-value=2.3e-24  Score=179.27  Aligned_cols=220  Identities=17%  Similarity=0.122  Sum_probs=160.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhh-hhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGF-LWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |++|||||+|+||+++++.|+++|++|++++|+.+....... +...  ...++.++++|+.|.+++.++++       +
T Consensus        21 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   98 (266)
T 4egf_A           21 KRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQ--FGTDVHTVAIDLAEPDAPAELARRAAEAFGG   98 (266)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--HCCCEEEEECCTTSTTHHHHHHHHHHHHHTS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--cCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            679999999999999999999999999999998654332211 1111  13478999999999998887765       7


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA----KSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|++|||||......    ..+.+...+++|+.++.++++++...    +...+||++||...+.+.+..          
T Consensus        99 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------  168 (266)
T 4egf_A           99 LDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDH----------  168 (266)
T ss_dssp             CSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTC----------
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCC----------
Confidence            899999999876432    34567778999999999999887542    124589999998765432211          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                                 ..|+.+|.+.+.+.+.++.++   ++++..++|+.+.++....... ............+      ...
T Consensus       169 -----------~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p------~~r  230 (266)
T 4egf_A          169 -----------YAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWG-DEAKSAPMIARIP------LGR  230 (266)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTC-SHHHHHHHHTTCT------TSS
T ss_pred             -----------hHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhcc-ChHHHHHHHhcCC------CCC
Confidence                       679999999999999988774   8999999999998764211100 0111222222222      455


Q ss_pred             ceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          223 FVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      +..++|+|+++++++....   .+..+++.|.
T Consensus       231 ~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG  262 (266)
T 4egf_A          231 FAVPHEVSDAVVWLASDAASMINGVDIPVDGG  262 (266)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHhCchhcCccCcEEEECCC
Confidence            7899999999999997643   2456777643

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.92  E-value=2.1e-23  Score=173.57  Aligned_cols=221  Identities=10%  Similarity=0.002  Sum_probs=162.5

Q ss_pred             CcEEEeCCcch--HHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            2 PEYCVTGGTGF--IAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~~G~--iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      |+++||||+|+  ||+++++.|+++|++|+++.|+.........+..... ..++.++++|+.|.+++.++++       
T Consensus         8 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (266)
T 3oig_A            8 RNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLD-RNDSIILPCDVTNDAEIETCFASIKEQVG   86 (266)
T ss_dssp             CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSS-SCCCEEEECCCSSSHHHHHHHHHHHHHHS
T ss_pred             CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcC-CCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            57999999998  9999999999999999999998643333333222211 2268999999999998888775       


Q ss_pred             CCCEEEEecccccc--------CCCCchhhhhhhhhHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCCCcccCC
Q 039049           73 GVDGVFHTASPVLV--------PYDNNIQATLIDPCIKGTLNVLSSCKKAK-SVKRVVLTSSCSSIRYRHDAQQVSPLNE  143 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~E  143 (305)
                      .+|++||+||....        ....+.+...+++|+.++.++++++...- ...+||++||...+.+.+..        
T Consensus        87 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  158 (266)
T 3oig_A           87 VIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMPNY--------  158 (266)
T ss_dssp             CCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTT--------
T ss_pred             CeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCCCc--------
Confidence            68999999998652        12455667789999999999999987651 23589999998765432211        


Q ss_pred             CCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCC
Q 039049          144 SHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTT  220 (305)
Q Consensus       144 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (305)
                                   ..|+.||.+.+.+.+.++.+.   +++++.++|+.+..+...... .............+      .
T Consensus       159 -------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~~------~  218 (266)
T 3oig_A          159 -------------NVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGIS-DFNSILKDIEERAP------L  218 (266)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCT-THHHHHHHHHHHST------T
T ss_pred             -------------chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccc-chHHHHHHHHhcCC------C
Confidence                         679999999999999888764   799999999999987543322 21223333333322      3


Q ss_pred             ccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          221 VGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       221 ~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      ..+.+++|+|+++++++....   .+..+++.|+
T Consensus       219 ~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdGG  252 (266)
T 3oig_A          219 RRTTTPEEVGDTAAFLFSDMSRGITGENLHVDSG  252 (266)
T ss_dssp             SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCCHHHHHHHHHHHcCCchhcCcCCEEEECCC
Confidence            457899999999999998643   2456777643

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.92  E-value=1.2e-24  Score=181.23  Aligned_cols=220  Identities=14%  Similarity=0.128  Sum_probs=161.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|++.|++|++++|+.+...+...  .+.....++.++++|+.|.+++.++++       ++
T Consensus        27 k~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~--~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  104 (271)
T 4ibo_A           27 RTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQ--EFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDV  104 (271)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHH--HHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--HHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence            679999999999999999999999999999997654332211  112224478899999999998888776       68


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      |++|||||......    ..+.+...+++|+.++.++++++...   .+..+||++||...+.+.+..            
T Consensus       105 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~------------  172 (271)
T 4ibo_A          105 DILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATV------------  172 (271)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTC------------
T ss_pred             CEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCc------------
Confidence            99999999865432    45567788999999999998776442   145699999997754432211            


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccce
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFV  224 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  224 (305)
                               ..|+.||.+.+.+.+.++.+   .++++..++|+.+.++...... .............+      ...+.
T Consensus       173 ---------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~p------~~r~~  236 (271)
T 4ibo_A          173 ---------APYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALI-DNPEFDAWVKARTP------AKRWG  236 (271)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH-HCHHHHHHHHHHST------TCSCB
T ss_pred             ---------hhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcc-cCHHHHHHHHhcCC------CCCCc
Confidence                     67999999999999998877   4899999999999887522100 00112222222222      34578


Q ss_pred             eHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          225 HIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       225 ~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      .++|+|+++++++....   .+..+++.|.
T Consensus       237 ~pedva~~v~~L~s~~~~~itG~~i~vdGG  266 (271)
T 4ibo_A          237 KPQELVGTAVFLSASASDYVNGQIIYVDGG  266 (271)
T ss_dssp             CGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CHHHHHHHHHHHhCccccCCCCcEEEECCC
Confidence            89999999999987643   2556788654

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.92  E-value=4.7e-24  Score=176.49  Aligned_cols=221  Identities=16%  Similarity=0.123  Sum_probs=156.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.+.......  .......++.++++|+.|.+++.++++       ++
T Consensus         3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   80 (256)
T 1geg_A            3 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVAS--EINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGF   80 (256)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--HHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            679999999999999999999999999999998654332211  111113468899999999998888776       78


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CC-ccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KS-VKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~-~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |+||||||......    ..+.+...+++|+.++.++++++...   .+ .++||++||...+.+.+.            
T Consensus        81 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------  148 (256)
T 1geg_A           81 DVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPE------------  148 (256)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCC------------
Confidence            99999999764321    34566778999999999888876542   13 579999999875443211            


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCC---c-----hHHHHHHHHhcCCCC
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPT---S-----TLLLILAMVKGLRGE  215 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~---~-----~~~~~~~~~~~~~~~  215 (305)
                         .      ..|+.||...+.+.+.++.+   .++++++++|+.+.++.......   .     ............   
T Consensus       149 ---~------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  216 (256)
T 1geg_A          149 ---L------AVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRI---  216 (256)
T ss_dssp             ---B------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTC---
T ss_pred             ---c------hhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcC---
Confidence               1      67999999999999988766   48999999999998864110000   0     000001111111   


Q ss_pred             CCCCCccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          216 YPNTTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       216 ~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                       +  ...+.+++|+|+++++++..+.   .+..+++.|.
T Consensus       217 -p--~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  252 (256)
T 1geg_A          217 -T--LGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGG  252 (256)
T ss_dssp             -T--TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             -C--CCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence             1  3458999999999999997643   2445777543

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.92  E-value=6.4e-24  Score=178.28  Aligned_cols=218  Identities=13%  Similarity=0.133  Sum_probs=157.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC---eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc------
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH---MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ------   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   72 (305)
                      |+++||||+|+||+++++.|++.|+   +|++..|+.+................++.++++|+.|.+++.++++      
T Consensus        34 k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  113 (287)
T 3rku_A           34 KTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEF  113 (287)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCGGG
T ss_pred             CEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            6899999999999999999999987   9999999876443322211111113478899999999999998876      


Q ss_pred             -CCCEEEEeccccccC-----CCCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccC
Q 039049           73 -GVDGVFHTASPVLVP-----YDNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLN  142 (305)
Q Consensus        73 -~~d~Vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  142 (305)
                       ++|++|||||.....     ...+.+...+++|+.++.++++++    ++. +..+||++||...+.+.+..       
T Consensus       114 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~IV~isS~~~~~~~~~~-------  185 (287)
T 3rku_A          114 KDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAK-NSGDIVNLGSIAGRDAYPTG-------  185 (287)
T ss_dssp             CSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCCTTC-------
T ss_pred             CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEECChhhcCCCCCC-------
Confidence             579999999976421     145567889999999999999987    344 56799999998754432211       


Q ss_pred             CCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCC
Q 039049          143 ESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNT  219 (305)
Q Consensus       143 E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (305)
                                    ..|+.||.+.+.+.+.++.+   .+++++.++||.+..+...................        
T Consensus       186 --------------~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--------  243 (287)
T 3rku_A          186 --------------SIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKD--------  243 (287)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTT--------
T ss_pred             --------------chHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcc--------
Confidence                          67999999999999999887   48999999999998864110000001111111111        


Q ss_pred             CccceeHHHHHHHHHHhhccccc---CceEEEec
Q 039049          220 TVGFVHIDDVVGAHILAMEETRA---SGRLICSS  250 (305)
Q Consensus       220 ~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~  250 (305)
                       ...+.++|+|+++++++..+..   +..+++.+
T Consensus       244 -~~p~~pedvA~~v~~l~s~~~~~i~g~~i~v~~  276 (287)
T 3rku_A          244 -TTPLMADDVADLIVYATSRKQNTVIADTLIFPT  276 (287)
T ss_dssp             -SCCEEHHHHHHHHHHHHTSCTTEEEEEEEEEET
T ss_pred             -cCCCCHHHHHHHHHHHhCCCCCeEecceEEeeC
Confidence             1235899999999999987654   34466653

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.92  E-value=1.5e-23  Score=177.06  Aligned_cols=219  Identities=14%  Similarity=0.002  Sum_probs=161.8

Q ss_pred             CcEEEeCCcc--hHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            2 PEYCVTGGTG--FIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~~G--~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      |+++||||+|  +||+++++.|++.|++|++++|+.........+...   .+++.++++|+.|.+++.++++       
T Consensus        31 k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  107 (296)
T 3k31_A           31 KKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAES---LGVKLTVPCDVSDAESVDNMFKVLAEEWG  107 (296)
T ss_dssp             CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH---HTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHh---cCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5799999997  999999999999999999999986433322222221   2357899999999998888775       


Q ss_pred             CCCEEEEecccccc--------CCCCchhhhhhhhhHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCCCcccCC
Q 039049           73 GVDGVFHTASPVLV--------PYDNNIQATLIDPCIKGTLNVLSSCKKAK-SVKRVVLTSSCSSIRYRHDAQQVSPLNE  143 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~E  143 (305)
                      ++|++|||||....        ....+.+...+++|+.++.++++++...- ...+||++||...+.+.+..        
T Consensus       108 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~~~--------  179 (296)
T 3k31_A          108 SLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVPHY--------  179 (296)
T ss_dssp             CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTT--------
T ss_pred             CCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCCCc--------
Confidence            67999999998653        22456778899999999999999987641 23589999998764432211        


Q ss_pred             CCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCC
Q 039049          144 SHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTT  220 (305)
Q Consensus       144 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (305)
                                   ..|+.||.+.+.+.+.++.++   ++++..++|+.+.++..... ..............+      .
T Consensus       180 -------------~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~p------~  239 (296)
T 3k31_A          180 -------------NVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGI-SDFHYILTWNKYNSP------L  239 (296)
T ss_dssp             -------------THHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSC-HHHHHHHHHHHHHST------T
T ss_pred             -------------hhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcc-cchHHHHHHHHhcCC------C
Confidence                         669999999999999988775   89999999999998764321 111122222222222      3


Q ss_pred             ccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          221 VGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       221 ~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      ..+..++|+|+++++++....   .+..+++.|.
T Consensus       240 ~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG  273 (296)
T 3k31_A          240 RRNTTLDDVGGAALYLLSDLGRGTTGETVHVDCG  273 (296)
T ss_dssp             SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCCHHHHHHHHHHHcCCccCCccCCEEEECCC
Confidence            457889999999999998643   2456788643

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.92  E-value=1.3e-23  Score=174.89  Aligned_cols=226  Identities=15%  Similarity=0.093  Sum_probs=158.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc---CCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ---GVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~Vi   78 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.+.................+.++.+|+.+.+.+.++++   ++|++|
T Consensus        11 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~lv   90 (267)
T 3t4x_A           11 KTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDILI   90 (267)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCEEE
Confidence            57999999999999999999999999999999865433221111111112367889999999998888776   789999


Q ss_pred             EeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcc
Q 039049           79 HTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPD  150 (305)
Q Consensus        79 ~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~  150 (305)
                      ||||......    ..+.+...+++|+.++.++.+++.    +. +..++|++||...+.+.+.               .
T Consensus        91 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~---------------~  154 (267)
T 3t4x_A           91 NNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIER-KEGRVIFIASEAAIMPSQE---------------M  154 (267)
T ss_dssp             ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TEEEEEEECCGGGTSCCTT---------------C
T ss_pred             ECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCEEEEEcchhhccCCCc---------------c
Confidence            9999876532    345667789999999888877653    34 5679999999876543221               1


Q ss_pred             cccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCC-------C-CCchHHHHHHHHhcCCCCCCCC
Q 039049          151 YCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAP-------Q-PTSTLLLILAMVKGLRGEYPNT  219 (305)
Q Consensus       151 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~  219 (305)
                            ..|+.||.+.+.+.+.++.+.   ++++..++|+.+.++....       . ..................  ..
T Consensus       155 ------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  226 (267)
T 3t4x_A          155 ------AHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPT--SI  226 (267)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTT--CS
T ss_pred             ------hHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCc--cc
Confidence                  679999999999999998775   6999999999988762110       0 000111111111111100  01


Q ss_pred             CccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          220 TVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       220 ~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      ...+.+++|+|+++++++....   .+..+++.|.
T Consensus       227 ~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG  261 (267)
T 3t4x_A          227 IQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDGG  261 (267)
T ss_dssp             SCSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ccCccCHHHHHHHHHHHcCccccCccCCeEEECCC
Confidence            4568999999999999987543   2556888643

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.92  E-value=2.4e-24  Score=179.87  Aligned_cols=220  Identities=19%  Similarity=0.122  Sum_probs=159.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc------CCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ------GVD   75 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------~~d   75 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.+........  ......++.++++|+.|.+++.++++      ++|
T Consensus        34 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD  111 (275)
T 4imr_A           34 RTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQR--IIASGGTAQELAGDLSEAGAGTDLIERAEAIAPVD  111 (275)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHH--HHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH--HHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCCC
Confidence            6799999999999999999999999999999987654433221  11124578999999999998888775      689


Q ss_pred             EEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           76 GVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        76 ~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      ++|||||......    ..+.+...+++|+.++.++++++.    +. +..+||++||...+.+...             
T Consensus       112 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~Iv~isS~~~~~~~~~-------------  177 (275)
T 4imr_A          112 ILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVAR-KWGRVVSIGSINQLRPKSV-------------  177 (275)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCTT-------------
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECCHHhCCCCCC-------------
Confidence            9999999765432    455677789999999999999873    34 5579999999875432111             


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccce
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFV  224 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  224 (305)
                        .      ..|+.||.+.+.+.+.++.++   ++++..++||.+..+..................... .    ...+.
T Consensus       178 --~------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-p----~~r~~  244 (275)
T 4imr_A          178 --V------TAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLN-W----MGRAG  244 (275)
T ss_dssp             --B------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHS-T----TCSCB
T ss_pred             --c------hhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcC-c----cCCCc
Confidence              1      669999999999999988775   899999999999876321100000111111111110 1    23467


Q ss_pred             eHHHHHHHHHHhhccccc---CceEEEec
Q 039049          225 HIDDVVGAHILAMEETRA---SGRLICSS  250 (305)
Q Consensus       225 ~v~D~a~~~~~~~~~~~~---~~~~~~~~  250 (305)
                      .++|+|+++++++.....   +..+++.|
T Consensus       245 ~pedvA~~v~fL~s~~a~~itG~~i~vdG  273 (275)
T 4imr_A          245 RPEEMVGAALFLASEACSFMTGETIFLTG  273 (275)
T ss_dssp             CGGGGHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             CHHHHHHHHHHHcCcccCCCCCCEEEeCC
Confidence            899999999999986442   44577754

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.92  E-value=5.6e-24  Score=177.49  Aligned_cols=217  Identities=19%  Similarity=0.145  Sum_probs=156.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCccc-chhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLS-KVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |+|+||||+|+||+++++.|+++|++|+++.|+..... .....  ......++.++++|+.|.+++.++++       +
T Consensus        30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (271)
T 4iin_A           30 KNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNE--LEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGG  107 (271)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH--HHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH--HHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            67999999999999999999999999999999654321 11111  11223478999999999988888775       7


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKK----AKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|+||||||......    ..+.+...+++|+.++.++++.+..    . +..+||++||...+.+.+..          
T Consensus       108 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~----------  176 (271)
T 4iin_A          108 LSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKS-RFGSVVNVASIIGERGNMGQ----------  176 (271)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHHCCTTC----------
T ss_pred             CCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhc-CCCEEEEEechhhcCCCCCc----------
Confidence            899999999876532    3456778899999999998887643    3 55799999998765432211          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                                 ..|+.+|.+.+.+.+.++.+   .++++..++|+.+.++.......   .........      .....
T Consensus       177 -----------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~---~~~~~~~~~------~~~~~  236 (271)
T 4iin_A          177 -----------TNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKD---ELKADYVKN------IPLNR  236 (271)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC---------------CGGG------CTTCS
T ss_pred             -----------hHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcH---HHHHHHHhc------CCcCC
Confidence                       67999999999999988877   58999999999998775322110   000000011      11456


Q ss_pred             ceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          223 FVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      +.+++|+|+++.+++..+.   .+..+++.|.
T Consensus       237 ~~~p~dvA~~i~~l~s~~~~~itG~~i~vdGG  268 (271)
T 4iin_A          237 LGSAKEVAEAVAFLLSDHSSYITGETLKVNGG  268 (271)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHhCCCcCCCcCCEEEeCCC
Confidence            8899999999999998654   3556777654

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.92  E-value=3e-24  Score=177.32  Aligned_cols=218  Identities=16%  Similarity=0.124  Sum_probs=154.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.+.......  ..   ..++.++++|+.|.+++.++++       ++
T Consensus         7 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (253)
T 1hxh_A            7 KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAA--EL---GERSMFVRHDVSSEADWTLVMAAVQRRLGTL   81 (253)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH--HH---CTTEEEECCCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--Hc---CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999999997643322111  11   2368899999999988887765       47


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |+||||||......    ..+.+...+++|+.++.++.+.+    ++. + ++||++||...+.+.+.            
T Consensus        82 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~-g~iv~isS~~~~~~~~~------------  147 (253)
T 1hxh_A           82 NVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET-G-GSIINMASVSSWLPIEQ------------  147 (253)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-C-EEEEEECCGGGTSCCTT------------
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHc-C-CEEEEEcchhhcCCCCC------------
Confidence            99999999865421    34567788999999888777654    344 5 89999999876543211            


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc-----CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC-----GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTV  221 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (305)
                         .      ..|+.||...+.+.+.++.+.     +++++++||+.++++.........  .............  ...
T Consensus       148 ---~------~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~--p~~  214 (253)
T 1hxh_A          148 ---Y------AGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKG--VSKEMVLHDPKLN--RAG  214 (253)
T ss_dssp             ---B------HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTT--CCHHHHBCBTTTB--TTC
T ss_pred             ---C------ccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchh--hhHHHHhhhhccC--ccC
Confidence               1      679999999999998887663     899999999999987421100000  0001011100000  134


Q ss_pred             cceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          222 GFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      .+.+++|+|+++++++..+.   .+..+++.|.
T Consensus       215 ~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG  247 (253)
T 1hxh_A          215 RAYMPERIAQLVLFLASDESSVMSGSELHADNS  247 (253)
T ss_dssp             CEECHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             CCCCHHHHHHHHHHHcCccccCCCCcEEEECCC
Confidence            58999999999999997653   2445777654

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.92  E-value=5.1e-24  Score=177.16  Aligned_cols=225  Identities=12%  Similarity=0.023  Sum_probs=159.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|++.|++|++++|+.+................++.++++|+.|.+++.++++       ++
T Consensus         9 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   88 (265)
T 3lf2_A            9 AVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGCA   88 (265)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999865433222111110112258899999999988887764       68


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      |++|||||......    ..+.+...+++|+.++.++++++...   .+..+||++||...+.+.+..            
T Consensus        89 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------------  156 (265)
T 3lf2_A           89 SILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHM------------  156 (265)
T ss_dssp             SEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTB------------
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCc------------
Confidence            99999999865432    45567889999999999999987432   145689999998754432211            


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCC-------CchHHHHHHHHhcCCCCCC
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQP-------TSTLLLILAMVKGLRGEYP  217 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~-------~~~~~~~~~~~~~~~~~~~  217 (305)
                               ..|+.||...+.+.+.++.++   |+++..++|+.+.++......       .....+...........  
T Consensus       157 ---------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--  225 (265)
T 3lf2_A          157 ---------VATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIP--  225 (265)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCT--
T ss_pred             ---------hhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCC--
Confidence                     679999999999999988775   899999999999876321100       01111111111111111  


Q ss_pred             CCCccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          218 NTTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       218 ~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                        ...+..++|+|+++++++....   .+..+++.|.
T Consensus       226 --~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG  260 (265)
T 3lf2_A          226 --LGRLGKPIEAARAILFLASPLSAYTTGSHIDVSGG  260 (265)
T ss_dssp             --TCSCBCHHHHHHHHHHHHSGGGTTCCSEEEEESSS
T ss_pred             --cCCCcCHHHHHHHHHHHhCchhcCcCCCEEEECCC
Confidence              3457899999999999997543   2445777543

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.92  E-value=3.4e-24  Score=179.25  Aligned_cols=208  Identities=18%  Similarity=0.085  Sum_probs=152.2

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHH-cCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLD-KGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      |++|+||||+|+||+++++.|++ .|++|++++|+.+......  ..+.....++.++.+|+.|.+++.++++       
T Consensus         4 ~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~--~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (276)
T 1wma_A            4 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAV--QQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG   81 (276)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHH--HHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHH--HHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            47899999999999999999999 9999999999865332211  1111113468899999999998888776       


Q ss_pred             CCCEEEEeccccccCCC----CchhhhhhhhhHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCC-C------CCcc
Q 039049           73 GVDGVFHTASPVLVPYD----NNIQATLIDPCIKGTLNVLSSCKKAK-SVKRVVLTSSCSSIRYRHDA-Q------QVSP  140 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~-~------~~~~  140 (305)
                      ++|+||||||.......    .+.+...+++|+.++.++++++.... ..++||++||..++++.... +      ...+
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  161 (276)
T 1wma_A           82 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSET  161 (276)
T ss_dssp             SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSS
T ss_pred             CCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhccccc
Confidence            78999999997654321    25567789999999999999987751 12499999998876531110 0      0011


Q ss_pred             cCCCC-------------------CCCcccccccchhHHHHHHHHHHHHHHHHHH-------cCCcEEEEecCceecCCC
Q 039049          141 LNESH-------------------WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD-------CGIDMVVVNPSFVVGPLL  194 (305)
Q Consensus       141 ~~E~~-------------------~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-------~~~~~~i~Rp~~v~G~~~  194 (305)
                      ++|++                   +..|.      ..|+.||.+.|.+++.++.+       .++++++++|+.+.++..
T Consensus       162 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~------~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~  235 (276)
T 1wma_A          162 ITEEELVGLMNKFVEDTKKGVHQKEGWPS------SAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMA  235 (276)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTCTTTTTCCS------CHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTT
T ss_pred             cchhhhhhhhhhhhhhhcccccccCCCcc------chhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcC
Confidence            22211                   01111      56999999999999888766       489999999999987653


Q ss_pred             CCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhccc
Q 039049          195 APQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  240 (305)
                      ..                        ..+.+++|+|+++++++..+
T Consensus       236 ~~------------------------~~~~~~~~~a~~~~~l~~~~  257 (276)
T 1wma_A          236 GP------------------------KATKSPEEGAETPVYLALLP  257 (276)
T ss_dssp             CT------------------------TCSBCHHHHTHHHHHHHSCC
T ss_pred             Cc------------------------cccCChhHhhhhHhhhhcCc
Confidence            21                        13689999999999999755

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.92  E-value=1.2e-23  Score=173.59  Aligned_cols=206  Identities=19%  Similarity=0.205  Sum_probs=151.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|+++.|+++...             .+.++++|+.|++++.++++       ++
T Consensus        22 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i   88 (253)
T 2nm0_A           22 RSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-------------GFLAVKCDITDTEQVEQAYKEIEETHGPV   88 (253)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-------------TSEEEECCTTSHHHHHHHHHHHHHHTCSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-------------cceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            67999999999999999999999999999999865321             36789999999998887765       47


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKK----AKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |+|||+||......    ..+.+...+++|+.++.++++++..    . +.++||++||...+.+.+.            
T Consensus        89 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~~~~~------------  155 (253)
T 2nm0_A           89 EVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRA-KKGRVVLISSVVGLLGSAG------------  155 (253)
T ss_dssp             SEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEEEEECCCCCCCCHHH------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEECchhhCCCCCC------------
Confidence            99999999865421    4556778899999999999987643    3 5579999999865432110            


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                               ...|+.+|.+.+.+.+.++.+.   ++++++++|+.+.++.......   ..........+      ...+
T Consensus       156 ---------~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~p------~~~~  217 (253)
T 2nm0_A          156 ---------QANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTD---EQRANIVSQVP------LGRY  217 (253)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC------------CHHHHHTTCT------TCSC
T ss_pred             ---------cHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCH---HHHHHHHhcCC------CCCC
Confidence                     1569999999999999888764   7999999999998765321100   01111111111      2458


Q ss_pred             eeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          224 VHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      ++++|+|++++.++..+.   .+..+.+.|.
T Consensus       218 ~~p~dvA~~i~~l~s~~~~~~tG~~i~vdGG  248 (253)
T 2nm0_A          218 ARPEEIAATVRFLASDDASYITGAVIPVDGG  248 (253)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHHhCccccCCcCcEEEECCc
Confidence            999999999999997653   2445677543

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.92  E-value=4.3e-23  Score=174.48  Aligned_cols=224  Identities=16%  Similarity=0.119  Sum_probs=159.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCc---------ccchhh-hhhccCccCceEEEEccCCCcchHHHHh
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPED---------LSKVGF-LWELNGAEERLKIMKADLLMEGSFDEAI   71 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~---------~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~   71 (305)
                      |+++||||+|+||+++++.|++.|++|++++|++..         ...... .........++.++++|+.|.+++.+++
T Consensus        29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~  108 (299)
T 3t7c_A           29 KVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAAV  108 (299)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHH
Confidence            679999999999999999999999999999987421         111111 1112222457899999999999888877


Q ss_pred             c-------CCCEEEEeccccccCC-----CCchhhhhhhhhHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCC
Q 039049           72 Q-------GVDGVFHTASPVLVPY-----DNNIQATLIDPCIKGTLNVLSSCKKA----KSVKRVVLTSSCSSIRYRHDA  135 (305)
Q Consensus        72 ~-------~~d~Vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~  135 (305)
                      +       ++|++|||||......     ..+.+...+++|+.++.++++++...    ++..+||++||...+.+.+..
T Consensus       109 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~  188 (299)
T 3t7c_A          109 DDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENI  188 (299)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCCTTC
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCc
Confidence            5       6899999999765432     45667889999999999999986432    235699999998765432211


Q ss_pred             CCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCC-----------Cch
Q 039049          136 QQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQP-----------TST  201 (305)
Q Consensus       136 ~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~-----------~~~  201 (305)
                                           ..|+.||.+.+.+.+.++.++   |+++..++||.+.++......           ...
T Consensus       189 ---------------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  247 (299)
T 3t7c_A          189 ---------------------GNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTV  247 (299)
T ss_dssp             ---------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCH
T ss_pred             ---------------------chHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchh
Confidence                                 679999999999999988775   899999999999988643200           000


Q ss_pred             HHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          202 LLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      ............  .   ...+..++|+|+++++++....   .+..+++.|.
T Consensus       248 ~~~~~~~~~~~~--~---p~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG  295 (299)
T 3t7c_A          248 EDFQVASRQMHV--L---PIPYVEPADISNAILFLVSDDARYITGVSLPVDGG  295 (299)
T ss_dssp             HHHHHHHHHHSS--S---SCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             hHHHHHhhhhcc--c---CcCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCC
Confidence            000000000111  1   1457899999999999997653   2456777643

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.92  E-value=9.7e-24  Score=172.41  Aligned_cols=202  Identities=17%  Similarity=0.152  Sum_probs=152.4

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhh-hhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGF-LWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      ||+++||||+|+||++++++|+++|++|++++|+.++...... +..  ....++.++++|+.|++++.++++       
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQ--EQGVEVFYHHLDVSKAESVEEFSKKVLERFG   79 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH--HHCCCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--hcCCeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            6889999999999999999999999999999998654433221 111  113478999999999999988876       


Q ss_pred             CCCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           73 GVDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA--KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      ++|++|||||......    ..+.+...+++|+.++.++++++...  .+..++|++||.......+..           
T Consensus        80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~-----------  148 (235)
T 3l77_A           80 DVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPYG-----------  148 (235)
T ss_dssp             SCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCTTC-----------
T ss_pred             CCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCCCc-----------
Confidence            6899999999876543    45667889999999999999987542  123567777776543322111           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHH-cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcccee
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKD-CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVH  225 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  225 (305)
                                ..|+.+|.+.+.+.+.+..+ .+++++.++||.+..+........                 .....++.
T Consensus       149 ----------~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~~~-----------------~~~~~~~~  201 (235)
T 3l77_A          149 ----------GGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKPGK-----------------PKEKGYLK  201 (235)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCCSCC-----------------CGGGTCBC
T ss_pred             ----------chHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccccCCc-----------------ccccCCCC
Confidence                      66999999999999887544 489999999999987653221100                 01235789


Q ss_pred             HHHHHHHHHHhhccccc
Q 039049          226 IDDVVGAHILAMEETRA  242 (305)
Q Consensus       226 v~D~a~~~~~~~~~~~~  242 (305)
                      ++|+|++++++++.+..
T Consensus       202 p~dva~~v~~l~~~~~~  218 (235)
T 3l77_A          202 PDEIAEAVRCLLKLPKD  218 (235)
T ss_dssp             HHHHHHHHHHHHTSCTT
T ss_pred             HHHHHHHHHHHHcCCCC
Confidence            99999999999998765

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.92  E-value=1.6e-23  Score=174.58  Aligned_cols=219  Identities=17%  Similarity=0.169  Sum_probs=158.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++++||||+|+||++++++|+++|++|+++.|+...... ...........++.++++|+.|.+++.++++       ++
T Consensus        26 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  104 (269)
T 3gk3_A           26 RVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVS-TWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFGKV  104 (269)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHH-HHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHH-HHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            579999999999999999999999999999865432211 1111122234578999999999998887765       78


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKK----AKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |+||||||......    ..+.+...+++|+.++.++++.+..    . +..+||++||...+.+....           
T Consensus       105 d~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~-----------  172 (269)
T 3gk3_A          105 DVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVER-RFGRIVNIGSVNGSRGAFGQ-----------  172 (269)
T ss_dssp             SEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHHCCTTB-----------
T ss_pred             CEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEeCChhhccCCCCc-----------
Confidence            99999999875432    4456778899999999999988743    3 55799999998765443211           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                                ..|+.||.+.+.+.+.++.++   ++++++++|+.+.++........       .... ..........+
T Consensus       173 ----------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~-------~~~~-~~~~~~~~~~~  234 (269)
T 3gk3_A          173 ----------ANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQD-------VLEA-KILPQIPVGRL  234 (269)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC--------------C-CSGGGCTTSSC
T ss_pred             ----------chHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchh-------HHHH-HhhhcCCcCCc
Confidence                      679999999999998888764   89999999999988764321100       0000 00001114567


Q ss_pred             eeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          224 VHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      .+++|+|+++++++....   .+..+++.|.
T Consensus       235 ~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG  265 (269)
T 3gk3_A          235 GRPDEVAALIAFLCSDDAGFVTGADLAINGG  265 (269)
T ss_dssp             BCHHHHHHHHHHHTSTTCTTCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHHhCCCcCCeeCcEEEECCC
Confidence            899999999999997653   2556888643

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.92  E-value=1.8e-23  Score=176.19  Aligned_cols=219  Identities=13%  Similarity=-0.003  Sum_probs=158.8

Q ss_pred             CcEEEeCCcch--HHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            2 PEYCVTGGTGF--IAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~~G~--iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      |+++||||+|+  ||+++++.|++.|++|+++.|+.........+..   ...++.++++|+.|.+++.++++       
T Consensus        32 k~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (293)
T 3grk_A           32 KRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAE---ELGAFVAGHCDVADAASIDAVFETLEKKWG  108 (293)
T ss_dssp             CEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHH---HHTCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHH---hcCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence            57999999988  9999999999999999999998532222222221   12368899999999998888775       


Q ss_pred             CCCEEEEecccccc--------CCCCchhhhhhhhhHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCCCcccCC
Q 039049           73 GVDGVFHTASPVLV--------PYDNNIQATLIDPCIKGTLNVLSSCKKAK-SVKRVVLTSSCSSIRYRHDAQQVSPLNE  143 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~E  143 (305)
                      ++|++|||||....        ....+.+...+++|+.++.++++++...- ...+||++||...+.+.+..        
T Consensus       109 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~--------  180 (293)
T 3grk_A          109 KLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMPNY--------  180 (293)
T ss_dssp             CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCTTT--------
T ss_pred             CCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCCch--------
Confidence            68999999998642        22456778899999999999999987641 23589999998765432221        


Q ss_pred             CCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCC
Q 039049          144 SHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTT  220 (305)
Q Consensus       144 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (305)
                                   ..|+.||.+.+.+.+.++.++   ++++..++|+.+.++...... .............+      .
T Consensus       181 -------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~p------~  240 (293)
T 3grk_A          181 -------------NVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIG-DFRYILKWNEYNAP------L  240 (293)
T ss_dssp             -------------THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------C-CHHHHHHHHHHHST------T
T ss_pred             -------------HHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhccc-chHHHHHHHHhcCC------C
Confidence                         669999999999999988774   899999999999987543221 11222223322222      3


Q ss_pred             ccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          221 VGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       221 ~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      ..+..++|+|+++++++....   .+..+++.|.
T Consensus       241 ~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  274 (293)
T 3grk_A          241 RRTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSG  274 (293)
T ss_dssp             SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCCHHHHHHHHHHHcCccccCCcceEEEECCC
Confidence            457889999999999998643   2456777643

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.92  E-value=6.9e-24  Score=173.20  Aligned_cols=192  Identities=18%  Similarity=0.121  Sum_probs=138.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++|+||||+|+||+++++.|+++|++|++++|+.+.....   ...   ..++.++.+|+.|.+++.++++       ++
T Consensus         6 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~---~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (234)
T 2ehd_A            6 GAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQAL---AAE---LEGALPLPGDVREEGDWARAVAAMEEAFGEL   79 (234)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHH---STTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH---HHH---hhhceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            5699999999999999999999999999999976433221   111   1267899999999988887764       68


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |+|||+||......    ..+.+...+++|+.++.++++.+    ++. +.++||++||..++.+.+.            
T Consensus        80 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~------------  146 (234)
T 2ehd_A           80 SALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRR-GGGTIVNVGSLAGKNPFKG------------  146 (234)
T ss_dssp             CEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-TCEEEEEECCTTTTSCCTT------------
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCcEEEEECCchhcCCCCC------------
Confidence            99999999765322    34566778999999998666554    444 6789999999875432211            


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                         .      ..|+.+|...+.+.+.++.+   .+++++++||+.+.++.....            .. .       ..+
T Consensus       147 ---~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~------------~~-~-------~~~  197 (234)
T 2ehd_A          147 ---G------AAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNT------------PG-Q-------AWK  197 (234)
T ss_dssp             ---C------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC------------------------------------
T ss_pred             ---C------chhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccc------------cc-c-------cCC
Confidence               1      67999999999998887765   489999999999877642110            00 0       115


Q ss_pred             eeHHHHHHHHHHhhcccc
Q 039049          224 VHIDDVVGAHILAMEETR  241 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~  241 (305)
                      ++++|+|++++.++..+.
T Consensus       198 ~~~~dvA~~~~~l~~~~~  215 (234)
T 2ehd_A          198 LKPEDVAQAVLFALEMPG  215 (234)
T ss_dssp             CCHHHHHHHHHHHHHSCC
T ss_pred             CCHHHHHHHHHHHhCCCc
Confidence            799999999999998754

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.92  E-value=1e-23  Score=175.64  Aligned_cols=223  Identities=17%  Similarity=0.126  Sum_probs=157.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+++......   ..   ..++.++++|+.|.+++.++++       ++
T Consensus        10 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   83 (270)
T 1yde_A           10 KVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALE---QE---LPGAVFILCDVTQEDDVKTLVSETIRRFGRL   83 (270)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---HH---CTTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HH---hcCCeEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            67999999999999999999999999999999765332211   11   1247889999999998888775       68


Q ss_pred             CEEEEeccccccC-----CCCchhhhhhhhhHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           75 DGVFHTASPVLVP-----YDNNIQATLIDPCIKGTLNVLSSCKKA--KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        75 d~Vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      |++|||||.....     ...+.+...+++|+.++.++++++...  .+.++||++||.....+.+..            
T Consensus        84 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------------  151 (270)
T 1yde_A           84 DCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQA------------  151 (270)
T ss_dssp             CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTC------------
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCCCC------------
Confidence            9999999976431     134456778999999999999988532  023799999998654432111            


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCC---CCCchHHHHHHHHhcCCCCCCCCCc
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAP---QPTSTLLLILAMVKGLRGEYPNTTV  221 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  221 (305)
                               ..|+.+|...+.+.+.++.+   ++++++++||+.++++....   ........+.......+      ..
T Consensus       152 ---------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p------~~  216 (270)
T 1yde_A          152 ---------VPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQP------LG  216 (270)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTST------TS
T ss_pred             ---------cccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCC------CC
Confidence                     67999999999999988866   58999999999999874211   00111111111111111      23


Q ss_pred             cceeHHHHHHHHHHhhccc-c-cCceEEEec-CCcCHHH
Q 039049          222 GFVHIDDVVGAHILAMEET-R-ASGRLICSS-SVAHWSP  257 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~-~-~~~~~~~~~-~~~s~~e  257 (305)
                      .+..++|+|+++++++... . .+..+++.| ..+....
T Consensus       217 r~~~p~dva~~v~~L~s~~~~itG~~i~vdGG~~~~~~~  255 (270)
T 1yde_A          217 RMGQPAEVGAAAVFLASEANFCTGIELLVTGGAELGYGC  255 (270)
T ss_dssp             SCBCHHHHHHHHHHHHHHCTTCCSCEEEESTTTTSCC--
T ss_pred             CCcCHHHHHHHHHHHcccCCCcCCCEEEECCCeecccCc
Confidence            4689999999999998752 1 244677754 4444433

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.92  E-value=3.3e-23  Score=170.20  Aligned_cols=212  Identities=15%  Similarity=0.102  Sum_probs=155.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.++....   ....    ++.++++|+.|.+++.++++       ++
T Consensus         6 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   78 (245)
T 1uls_A            6 KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREA---AEAV----GAHPVVMDVADPASVERGFAEALAHLGRL   78 (245)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHTT----TCEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHc----CCEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            6799999999999999999999999999999986433221   1111    37889999999998887765       48


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      |+||||||......    ..+.+...+++|+.++.++.+++...   .+.++||++||.. +.+.+.             
T Consensus        79 d~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~-------------  144 (245)
T 1uls_A           79 DGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLG-------------  144 (245)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTT-------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCC-------------
Confidence            99999999765321    34566778999999999998887542   2567999999987 433211             


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccce
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFV  224 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  224 (305)
                        .      ..|+.+|...+.+.+.++.+.   ++++++++|+.+.++..... .  ...........+      ...+.
T Consensus       145 --~------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~--~~~~~~~~~~~p------~~~~~  207 (245)
T 1uls_A          145 --Q------ANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV-P--EKVREKAIAATP------LGRAG  207 (245)
T ss_dssp             --C------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS-C--HHHHHHHHHTCT------TCSCB
T ss_pred             --c------hhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhc-C--HHHHHHHHhhCC------CCCCc
Confidence              1      669999999999988887664   89999999999988754321 1  111222222211      23478


Q ss_pred             eHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          225 HIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       225 ~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      +++|+|+++++++..+.   .+..+.+.|.
T Consensus       208 ~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG  237 (245)
T 1uls_A          208 KPLEVAYAALFLLSDESSFITGQVLFVDGG  237 (245)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CHHHHHHHHHHHhCchhcCCcCCEEEECCC
Confidence            99999999999997643   2445677543

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.92  E-value=3.1e-24  Score=183.43  Aligned_cols=231  Identities=14%  Similarity=0.058  Sum_probs=166.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeC----------CCcccchhhhhhccCccCceEEEEccCCCcchHHHHh
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRD----------PEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAI   71 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~----------~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~   71 (305)
                      |++|||||+|+||+++++.|++.|++|++++|+          .......  .........++.++++|+.|.+++.+++
T Consensus        28 k~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~Dv~d~~~v~~~~  105 (322)
T 3qlj_A           28 RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSV--VDEITAAGGEAVADGSNVADWDQAAGLI  105 (322)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHH--HHHHHHTTCEEEEECCCTTSHHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHH--HHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            579999999999999999999999999999987          2211111  1112222447889999999999888877


Q ss_pred             c-------CCCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhcC---C------ccEEEEeccceeeec
Q 039049           72 Q-------GVDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKAK---S------VKRVVLTSSCSSIRY  131 (305)
Q Consensus        72 ~-------~~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~------~~~~v~~SS~~~~~~  131 (305)
                      +       ++|++|||||......    ..+.+...+++|+.++.++++++...-   +      -.+||++||...+.+
T Consensus       106 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~  185 (322)
T 3qlj_A          106 QTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQG  185 (322)
T ss_dssp             HHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHC
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHccC
Confidence            5       7899999999876432    455678899999999999998875430   0      148999999876544


Q ss_pred             cCCCCCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHH
Q 039049          132 RHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAM  208 (305)
Q Consensus       132 ~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~  208 (305)
                      ....                     ..|+.||.+.+.+.+.++.+   .++++..++|+ +..+..........   .  
T Consensus       186 ~~~~---------------------~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~---~--  238 (322)
T 3qlj_A          186 SVGQ---------------------GNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMM---A--  238 (322)
T ss_dssp             BTTC---------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC--------
T ss_pred             CCCC---------------------ccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhh---h--
Confidence            3221                     67999999999999998877   58999999999 65554322111110   0  


Q ss_pred             HhcCCCCCCCCCccceeHHHHHHHHHHhhcccc---cCceEEEecC-C-----------------cCHHHHHHHHHHhCC
Q 039049          209 VKGLRGEYPNTTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS-V-----------------AHWSPIIEMLKATYP  267 (305)
Q Consensus       209 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~-~-----------------~s~~el~~~i~~~~~  267 (305)
                             .+.....++.++|+|.++++++....   .+..+++.|. .                 .++.|+++.+.+.++
T Consensus       239 -------~~~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~  311 (322)
T 3qlj_A          239 -------TQDQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLG  311 (322)
T ss_dssp             ------------CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHH
T ss_pred             -------ccccccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhh
Confidence                   01113456789999999999997644   3455777542 2                 377999999999886


Q ss_pred             C
Q 039049          268 S  268 (305)
Q Consensus       268 ~  268 (305)
                      .
T Consensus       312 ~  312 (322)
T 3qlj_A          312 K  312 (322)
T ss_dssp             H
T ss_pred             c
Confidence            3

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.92  E-value=5.8e-24  Score=177.22  Aligned_cols=207  Identities=14%  Similarity=0.075  Sum_probs=146.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.+...+...  ..   ..++.++++|+.|.+++.++++       ++
T Consensus        29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~--~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  103 (272)
T 4dyv_A           29 KIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAA--EI---GDDALCVPTDVTDPDSVRALFTATVEKFGRV  103 (272)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HH---TSCCEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--Hh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            579999999999999999999999999999998654332211  11   2478899999999998888775       78


Q ss_pred             CEEEEeccccccC-----CCCchhhhhhhhhHHHHHHHHHHHHhc---CC--ccEEEEeccceeeeccCCCCCCcccCCC
Q 039049           75 DGVFHTASPVLVP-----YDNNIQATLIDPCIKGTLNVLSSCKKA---KS--VKRVVLTSSCSSIRYRHDAQQVSPLNES  144 (305)
Q Consensus        75 d~Vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~--~~~~v~~SS~~~~~~~~~~~~~~~~~E~  144 (305)
                      |++|||||.....     ...+.+...+++|+.++.++.+++...   .+  ..+||++||...+.+.+.          
T Consensus       104 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~----------  173 (272)
T 4dyv_A          104 DVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPY----------  173 (272)
T ss_dssp             CEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTT----------
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCC----------
Confidence            9999999986432     145567889999999999888876443   02  369999999875543221          


Q ss_pred             CCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCc
Q 039049          145 HWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTV  221 (305)
Q Consensus       145 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (305)
                           .      ..|+.||.+.+.+.+.++.+   .++++..++|+.+..+.........    ....      ......
T Consensus       174 -----~------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~----~~~~------~~~~~~  232 (272)
T 4dyv_A          174 -----S------APYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGV----PQAD------LSIKVE  232 (272)
T ss_dssp             -----C------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC-------------------------------
T ss_pred             -----c------hHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccc----hhhh------hccccc
Confidence                 1      67999999999999988877   4899999999999887532211000    0000      001134


Q ss_pred             cceeHHHHHHHHHHhhcccccCc
Q 039049          222 GFVHIDDVVGAHILAMEETRASG  244 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~~~~~  244 (305)
                      .+++++|+|+++++++..+....
T Consensus       233 ~~~~pedvA~~v~fL~s~~~~~~  255 (272)
T 4dyv_A          233 PVMDVAHVASAVVYMASLPLDAN  255 (272)
T ss_dssp             ---CHHHHHHHHHHHHHSCTTSC
T ss_pred             CCCCHHHHHHHHHHHhCCCCcCc
Confidence            57899999999999999876643

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.92  E-value=4.2e-23  Score=173.01  Aligned_cols=218  Identities=12%  Similarity=0.014  Sum_probs=161.1

Q ss_pred             CcEEEeCCcch--HHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            2 PEYCVTGGTGF--IAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~~G~--iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      |+++||||+|+  ||+++++.|+++|++|++++|+. .......+.   ....++.++++|+.|.+++.++++       
T Consensus        27 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~l~---~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (280)
T 3nrc_A           27 KKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ-FKDRVEKLC---AEFNPAAVLPCDVISDQEIKDLFVELGKVWD  102 (280)
T ss_dssp             CEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT-CHHHHHHHH---GGGCCSEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch-HHHHHHHHH---HhcCCceEEEeecCCHHHHHHHHHHHHHHcC
Confidence            68999999977  99999999999999999999987 222222222   223368899999999998888765       


Q ss_pred             CCCEEEEeccccccC---------CCCchhhhhhhhhHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCCCccc
Q 039049           73 GVDGVFHTASPVLVP---------YDNNIQATLIDPCIKGTLNVLSSCKKA--KSVKRVVLTSSCSSIRYRHDAQQVSPL  141 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~  141 (305)
                      ++|+||||||.....         ...+.+...+++|+.++.++++++...  ....+||++||...+.+.+..      
T Consensus       103 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~------  176 (280)
T 3nrc_A          103 GLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSY------  176 (280)
T ss_dssp             SCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCTTT------
T ss_pred             CCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCCCc------
Confidence            579999999987541         245567778999999999999988653  134699999998765432211      


Q ss_pred             CCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCC
Q 039049          142 NESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPN  218 (305)
Q Consensus       142 ~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (305)
                                     ..|+.||.+.+.+.+.++.+   .++++.+++|+.+.++...... .............+     
T Consensus       177 ---------------~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~p-----  235 (280)
T 3nrc_A          177 ---------------NTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGIS-NFKKMLDYNAMVSP-----  235 (280)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCT-THHHHHHHHHHHST-----
T ss_pred             ---------------hhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCc-chHHHHHHHHhcCC-----
Confidence                           67999999999999988876   4899999999999987643322 11222333333222     


Q ss_pred             CCccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          219 TTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       219 ~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                       ...+..++|+|+++++++....   .+..+++.|.
T Consensus       236 -~~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG  270 (280)
T 3nrc_A          236 -LKKNVDIMEVGNTVAFLCSDMATGITGEVVHVDAG  270 (280)
T ss_dssp             -TCSCCCHHHHHHHHHHTTSGGGTTCCSCEEEESTT
T ss_pred             -CCCCCCHHHHHHHHHHHhCcccCCcCCcEEEECCC
Confidence             3457889999999999998643   3556788643

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.92  E-value=7.1e-23  Score=172.18  Aligned_cols=225  Identities=14%  Similarity=0.058  Sum_probs=159.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCc-------------ccchhhh-hhccCccCceEEEEccCCCcchH
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPED-------------LSKVGFL-WELNGAEERLKIMKADLLMEGSF   67 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~-------------~~~~~~~-~~~~~~~~~~~~~~~D~~d~~~~   67 (305)
                      |+++||||+|+||+++++.|++.|++|++++|+...             ....... ........++.++++|+.|.+++
T Consensus        12 k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   91 (286)
T 3uve_A           12 KVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDAL   91 (286)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHHHH
Confidence            679999999999999999999999999999997321             1111111 11222345789999999999988


Q ss_pred             HHHhc-------CCCEEEEeccccccCC-----CCchhhhhhhhhHHHHHHHHHHHHhc----CCccEEEEeccceeeec
Q 039049           68 DEAIQ-------GVDGVFHTASPVLVPY-----DNNIQATLIDPCIKGTLNVLSSCKKA----KSVKRVVLTSSCSSIRY  131 (305)
Q Consensus        68 ~~~~~-------~~d~Vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~  131 (305)
                      .++++       ++|++|||||......     ..+.+...+++|+.++.++++++...    +...+||++||...+.+
T Consensus        92 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  171 (286)
T 3uve_A           92 KAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKA  171 (286)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhccC
Confidence            88775       7899999999865432     45667889999999999999987542    12458999999876543


Q ss_pred             cCCCCCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCC----------
Q 039049          132 RHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQP----------  198 (305)
Q Consensus       132 ~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~----------  198 (305)
                      .+..                     ..|+.||...+.+.+.++.+   .++++..++||.+..+......          
T Consensus       172 ~~~~---------------------~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~  230 (286)
T 3uve_A          172 YPHT---------------------GHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLE  230 (286)
T ss_dssp             CTTC---------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSS
T ss_pred             CCCc---------------------cHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhcccccc
Confidence            2221                     66999999999999998877   4899999999999988643200          


Q ss_pred             CchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          199 TSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      ......+...... ....   ...+.+++|+|+++++++....   .+..+++.|.
T Consensus       231 ~~~~~~~~~~~~~-~~~~---p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG  282 (286)
T 3uve_A          231 NPGPDDMAPICQM-FHTL---PIPWVEPIDISNAVLFFASDEARYITGVTLPIDAG  282 (286)
T ss_dssp             SCCHHHHHHHHHT-TCSS---SCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ccchhhHHHHHHh-hhcc---CCCcCCHHHHHHHHHHHcCccccCCcCCEEeECCc
Confidence            0000000111000 0001   2568899999999999997643   2456777643

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.92  E-value=8.4e-24  Score=172.62  Aligned_cols=198  Identities=17%  Similarity=0.137  Sum_probs=147.7

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      ||+++||||+|+||+++++.|+++|++|++++|+.+........  .   ..++.++++|+.|.+++.++++       .
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~--~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   77 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELL--L---GNAVIGIVADLAHHEDVDVAFAAAVEWGGL   77 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH--H---GGGEEEEECCTTSHHHHHHHHHHHHHHHCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH--h---cCCceEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            46899999999999999999999999999999986543332211  1   1268899999999998887765       6


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA--KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      +|++|||||......    ..+.+...+++|+.++.++++++...  ....++|++||...+.+.+..            
T Consensus        78 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~------------  145 (235)
T 3l6e_A           78 PELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGKANE------------  145 (235)
T ss_dssp             CSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSCSSH------------
T ss_pred             CcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCCCCC------------
Confidence            799999999865432    45677889999999999999887432  111399999998765432211            


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccce
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFV  224 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  224 (305)
                               ..|+.||.+.+.+.+.++.+.   ++++..++||.+..+......            ..      ....++
T Consensus       146 ---------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~------------~~------~~~~~~  198 (235)
T 3l6e_A          146 ---------SLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTD------------HV------DPSGFM  198 (235)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC-----------------------------CB
T ss_pred             ---------cHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccC------------CC------CCcCCC
Confidence                     669999999999999998764   799999999999776422110            00      023578


Q ss_pred             eHHHHHHHHHHhhccccc
Q 039049          225 HIDDVVGAHILAMEETRA  242 (305)
Q Consensus       225 ~v~D~a~~~~~~~~~~~~  242 (305)
                      .++|+|++++.+++.+..
T Consensus       199 ~pedvA~~v~~l~~~~~~  216 (235)
T 3l6e_A          199 TPEDAAAYMLDALEARSS  216 (235)
T ss_dssp             CHHHHHHHHHHHTCCCSS
T ss_pred             CHHHHHHHHHHHHhCCCC
Confidence            999999999999987554

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.92  E-value=5.6e-24  Score=176.57  Aligned_cols=214  Identities=17%  Similarity=0.128  Sum_probs=157.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.+...+..  ...   ..++.++++|+.|.+++.++++       ++
T Consensus         7 k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~--~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (263)
T 2a4k_A            7 KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAV--AAL---EAEAIAVVADVSDPKAVEAVFAEALEEFGRL   81 (263)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--HTC---CSSEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--HHh---cCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            67999999999999999999999999999999865332211  111   1368899999999998887765       57


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCCCcccCCCCCCCc
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKAK-SVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDP  149 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~  149 (305)
                      |++|||||......    ..+.+...+++|+.++.++++++...- ...+||++||...+ +.+.               
T Consensus        82 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~~~---------------  145 (263)
T 2a4k_A           82 HGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAFG---------------  145 (263)
T ss_dssp             CEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CHHH---------------
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CCCC---------------
Confidence            99999999865432    344567789999999999999987651 13599999998765 2110               


Q ss_pred             ccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeH
Q 039049          150 DYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHI  226 (305)
Q Consensus       150 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  226 (305)
                            ...|+.||...+.+.+.++.+.   ++++++++|+.+.++..... .  ...........+      ...+.++
T Consensus       146 ------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~--~~~~~~~~~~~p------~~~~~~p  210 (263)
T 2a4k_A          146 ------LAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL-P--PWAWEQEVGASP------LGRAGRP  210 (263)
T ss_dssp             ------HHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS-C--HHHHHHHHHTST------TCSCBCH
T ss_pred             ------cHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhc-C--HHHHHHHHhcCC------CCCCcCH
Confidence                  1669999999999988887664   89999999999998864321 1  112222222222      2347899


Q ss_pred             HHHHHHHHHhhcccc---cCceEEEecC
Q 039049          227 DDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       227 ~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      +|+|+++++++..+.   .+..+++.|.
T Consensus       211 ~dvA~~v~~l~s~~~~~~tG~~i~vdgG  238 (263)
T 2a4k_A          211 EEVAQAALFLLSEESAYITGQALYVDGG  238 (263)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHhCccccCCcCCEEEECCC
Confidence            999999999997643   2445777654

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.92  E-value=1.5e-23  Score=172.74  Aligned_cols=207  Identities=14%  Similarity=0.106  Sum_probs=148.3

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc---CCCEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ---GVDGV   77 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~V   77 (305)
                      +|+|+||||+|+||+++++.|+++|++|++++|+++..   .   ..    .++.++ +|+  .+++.++++   ++|+|
T Consensus        19 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~---~---~~----~~~~~~-~D~--~~~~~~~~~~~~~iD~l   85 (249)
T 1o5i_A           19 DKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL---K---RS----GHRYVV-CDL--RKDLDLLFEKVKEVDIL   85 (249)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH---H---HT----CSEEEE-CCT--TTCHHHHHHHSCCCSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH---H---hh----CCeEEE-eeH--HHHHHHHHHHhcCCCEE
Confidence            36899999999999999999999999999999986211   1   11    146667 999  344555543   89999


Q ss_pred             EEeccccccCC----CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCc
Q 039049           78 FHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDP  149 (305)
Q Consensus        78 i~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~  149 (305)
                      |||||......    ..+.+...+++|+.++.++.+.+    ++. +.++||++||..++.+.+.               
T Consensus        86 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~---------------  149 (249)
T 1o5i_A           86 VLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK-GWGRIVAITSFSVISPIEN---------------  149 (249)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCTT---------------
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEcchHhcCCCCC---------------
Confidence            99999765432    34566778999999987766554    455 6689999999876543211               


Q ss_pred             ccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHH-HHHhcCCCCCCCCCcccee
Q 039049          150 DYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLIL-AMVKGLRGEYPNTTVGFVH  225 (305)
Q Consensus       150 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~  225 (305)
                      .      ..|+.+|.+.+.+.+.++.+   .+++++++||+.++++.......   .... ......+      ...+.+
T Consensus       150 ~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~~~~~~~~~p------~~~~~~  214 (249)
T 1o5i_A          150 L------YTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLS---EEKKKQVESQIP------MRRMAK  214 (249)
T ss_dssp             B------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSC---HHHHHHHHTTST------TSSCBC
T ss_pred             C------chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccch---hhHHHHHHhcCC------CCCCcC
Confidence            1      67999999999999888776   48999999999999885321000   1111 1221111      345889


Q ss_pred             HHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          226 IDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       226 v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      ++|+|+++++++..+.   .+..+++.+.
T Consensus       215 ~~dvA~~i~~l~s~~~~~~tG~~~~vdgG  243 (249)
T 1o5i_A          215 PEEIASVVAFLCSEKASYLTGQTIVVDGG  243 (249)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence            9999999999987543   2446777654

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.92  E-value=4.7e-23  Score=171.67  Aligned_cols=218  Identities=17%  Similarity=0.141  Sum_probs=158.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCc-ccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPED-LSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |+++||||+|+||+++++.|+++|++|+++.|+... .....  ........++.++++|+.|.+++.++++       +
T Consensus        32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~--~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  109 (271)
T 3v2g_A           32 KTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVV--SEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGG  109 (271)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH--HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH--HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            579999999999999999999999999999776532 11111  1111224478899999999998888775       7


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCCCcccCCCCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA-KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSD  148 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~  148 (305)
                      +|++|||||......    ..+.+...+++|+.++.++++++... ....++|++||.......        .      .
T Consensus       110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~--------~------~  175 (271)
T 3v2g_A          110 LDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVP--------W------P  175 (271)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCC--------S------T
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCC--------C------C
Confidence            899999999865432    45567889999999999999998664 134689999986532210        0      0


Q ss_pred             cccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcccee
Q 039049          149 PDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVH  225 (305)
Q Consensus       149 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  225 (305)
                      +.      ..|+.||.+.+.+.+.++.++   ++++..++|+.+.++.........    .......+      ...+..
T Consensus       176 ~~------~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~----~~~~~~~~------~~r~~~  239 (271)
T 3v2g_A          176 GI------SLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHA----EAQRERIA------TGSYGE  239 (271)
T ss_dssp             TC------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSH----HHHHHTCT------TSSCBC
T ss_pred             Cc------hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhH----HHHHhcCC------CCCCCC
Confidence            01      679999999999999988775   899999999999998654322211    12222221      345789


Q ss_pred             HHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          226 IDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       226 v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      ++|+|+++++++....   .+..+++.|.
T Consensus       240 pedvA~~v~fL~s~~~~~itG~~i~vdGG  268 (271)
T 3v2g_A          240 PQDIAGLVAWLAGPQGKFVTGASLTIDGG  268 (271)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHHhCcccCCccCCEEEeCcC
Confidence            9999999999987543   2455777654

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.92  E-value=8.1e-24  Score=174.51  Aligned_cols=196  Identities=13%  Similarity=0.048  Sum_probs=150.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+|+||||+|+||+++++.|+++|++|++++|+..+..              -..+.+|+.|.+++.++++       ++
T Consensus        23 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~--------------~~~~~~d~~d~~~v~~~~~~~~~~~g~i   88 (251)
T 3orf_A           23 KNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA--------------DHSFTIKDSGEEEIKSVIEKINSKSIKV   88 (251)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS--------------SEEEECSCSSHHHHHHHHHHHHTTTCCE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--------------ccceEEEeCCHHHHHHHHHHHHHHcCCC
Confidence            67999999999999999999999999999999876432              1356789999888887765       46


Q ss_pred             CEEEEeccccccC-----CCCchhhhhhhhhHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCCCcccCCCCCCC
Q 039049           75 DGVFHTASPVLVP-----YDNNIQATLIDPCIKGTLNVLSSCKKAK-SVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSD  148 (305)
Q Consensus        75 d~Vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~  148 (305)
                      |+||||||.....     ...+.+...+++|+.++.++++++.... ...+||++||...+.+.+..             
T Consensus        89 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------------  155 (251)
T 3orf_A           89 DTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTSGM-------------  155 (251)
T ss_dssp             EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTB-------------
T ss_pred             CEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCCCC-------------
Confidence            9999999975432     1345667789999999999999987641 12489999998765432211             


Q ss_pred             cccccccchhHHHHHHHHHHHHHHHHHH-----cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          149 PDYCKHYNLWYAYAKTIAEKEAWRIAKD-----CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       149 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                              ..|+.+|.+.+.+.+.++.+     .++++++++|+.+.++.           ........      ....+
T Consensus       156 --------~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~-----------~~~~~~~~------~~~~~  210 (251)
T 3orf_A          156 --------IAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPT-----------NRKYMSDA------NFDDW  210 (251)
T ss_dssp             --------HHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHH-----------HHHHCTTS------CGGGS
T ss_pred             --------chhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcc-----------hhhhcccc------ccccc
Confidence                    67999999999999998877     47999999999987652           11111111      25668


Q ss_pred             eeHHHHHHHHHHhhcc-cc---cCceEEEe
Q 039049          224 VHIDDVVGAHILAMEE-TR---ASGRLICS  249 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~-~~---~~~~~~~~  249 (305)
                      ++++|+|++++.++.. ..   .+..+++.
T Consensus       211 ~~~~dva~~i~~l~~~~~~~~~tG~~i~v~  240 (251)
T 3orf_A          211 TPLSEVAEKLFEWSTNSDSRPTNGSLVKFE  240 (251)
T ss_dssp             BCHHHHHHHHHHHHHCGGGCCCTTCEEEEE
T ss_pred             CCHHHHHHHHHHHhcCccccCCcceEEEEe
Confidence            9999999999999987 22   24456764

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.92  E-value=1.9e-23  Score=174.23  Aligned_cols=221  Identities=17%  Similarity=0.062  Sum_probs=158.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcc-cchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDL-SKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |+++||||+|+||+++++.|+++|++|+++.++.... ....  ........++.++++|+.|.+++.++++       +
T Consensus        19 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   96 (270)
T 3is3_A           19 KVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVV--SEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGH   96 (270)
T ss_dssp             CEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH--HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH--HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            6799999999999999999999999999988764321 1111  1111224578999999999998888775       6


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhcC-CccEEEEeccceee-eccCCCCCCcccCCCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKAK-SVKRVVLTSSCSSI-RYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~-~~~~~~~~~~~~~E~~~~  147 (305)
                      +|++|||||......    ..+.+...+++|+.++.++++++...- ...++|++||.... .+.+              
T Consensus        97 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------  162 (270)
T 3is3_A           97 LDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVP--------------  162 (270)
T ss_dssp             CCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCCCT--------------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCCCC--------------
Confidence            899999999875433    456678899999999999999987651 22489999997521 1110              


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCC---------CCchHHHHHHHHhcCCCC
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQ---------PTSTLLLILAMVKGLRGE  215 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~---------~~~~~~~~~~~~~~~~~~  215 (305)
                       +.      ..|+.||...+.+.+.++.++   ++++..++||.+.++.....         ...............+  
T Consensus       163 -~~------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--  233 (270)
T 3is3_A          163 -KH------SLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASP--  233 (270)
T ss_dssp             -TC------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHST--
T ss_pred             -CC------chhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCC--
Confidence             11      679999999999999988774   89999999999988753210         0001111111222222  


Q ss_pred             CCCCCccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          216 YPNTTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       216 ~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                          ...+.+++|+|+++++++....   .+..+++.|.
T Consensus       234 ----~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  268 (270)
T 3is3_A          234 ----LHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGG  268 (270)
T ss_dssp             ----TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             ----CCCCCCHHHHHHHHHHHcCCccCCccCcEEEeCCC
Confidence                4457889999999999997543   2445777543

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.92  E-value=8.5e-25  Score=182.12  Aligned_cols=224  Identities=14%  Similarity=0.083  Sum_probs=152.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchh-hhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVG-FLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.+...... .+... ....++.++++|+.|++++.++++       +
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (267)
T 2gdz_A            8 KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQ-FEPQKTLFIQCDVADQQQLRDTFRKVVDHFGR   86 (267)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT-SCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhh-cCCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            57999999999999999999999999999999865332211 11110 013368899999999998888765       4


Q ss_pred             CCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHH----HHhcC--CccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           74 VDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSS----CKKAK--SVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~----~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      +|+||||||...    .+.+...+++|+.++.++.+.    +++.+  ..++||++||...+.+.+.             
T Consensus        87 id~lv~~Ag~~~----~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------  149 (267)
T 2gdz_A           87 LDILVNNAGVNN----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQ-------------  149 (267)
T ss_dssp             CCEEEECCCCCC----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT-------------
T ss_pred             CCEEEECCCCCC----hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCC-------------
Confidence            799999999764    345677889999876665544    43331  1579999999876543211             


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHH-----HHcCCcEEEEecCceecCCCCCCCCchHH-----HHHHHHhcCCCCCC
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIA-----KDCGIDMVVVNPSFVVGPLLAPQPTSTLL-----LILAMVKGLRGEYP  217 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~-----~~~~~~~~~~~~~~  217 (305)
                        .      ..|+.||...+.+.+.++     ...++++++++|+.+.++...........     .......      +
T Consensus       150 --~------~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~------~  215 (267)
T 2gdz_A          150 --Q------PVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKD------M  215 (267)
T ss_dssp             --C------HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHH------H
T ss_pred             --C------chHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHH------H
Confidence              1      669999999999988642     23589999999999987642110000000     0000000      0


Q ss_pred             CCCccceeHHHHHHHHHHhhccccc-CceEEEec-CCcCHHH
Q 039049          218 NTTVGFVHIDDVVGAHILAMEETRA-SGRLICSS-SVAHWSP  257 (305)
Q Consensus       218 ~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~~~~~-~~~s~~e  257 (305)
                      .....+++++|+|++++.+++.+.. +..+++++ +.+++.|
T Consensus       216 ~~~~~~~~~~dvA~~v~~l~s~~~~~G~~~~v~gg~~~~~~~  257 (267)
T 2gdz_A          216 IKYYGILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQD  257 (267)
T ss_dssp             HHHHCCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEECC
T ss_pred             hccccCCCHHHHHHHHHHHhcCcCCCCcEEEecCCCcccccC
Confidence            0023478999999999999986543 45688864 4555544

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.92  E-value=1.1e-23  Score=174.89  Aligned_cols=200  Identities=19%  Similarity=0.112  Sum_probs=146.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      +++|||||+|+||+++++.|+++|++|++++|+.+........  ......++.++++|+.|.+++.++++       .+
T Consensus        30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i  107 (262)
T 3rkr_A           30 QVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVERE--IVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRC  107 (262)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH--HHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH--HHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            6799999999999999999999999999999987543332211  11123478999999999998887765       58


Q ss_pred             CEEEEeccccccC-----CCCchhhhhhhhhHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           75 DGVFHTASPVLVP-----YDNNIQATLIDPCIKGTLNVLSSCKK----AKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        75 d~Vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      |+||||||.....     ...+.+...+++|+.++.++++++..    . +..+||++||...+.+....          
T Consensus       108 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~----------  176 (262)
T 3rkr_A          108 DVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAA-KRGHIINISSLAGKNPVADG----------  176 (262)
T ss_dssp             SEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCCEEEEECSSCSSCCCTTC----------
T ss_pred             CEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCceEEEEechhhcCCCCCC----------
Confidence            9999999983221     24556778999999999999988643    3 56799999998765432211          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                                 ..|+.+|.+.+.+.+.++.+   .++++++++||.+..+......           ...      ....
T Consensus       177 -----------~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-----------~~~------~~~~  228 (262)
T 3rkr_A          177 -----------AAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLS-----------AKK------SALG  228 (262)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC---------------------------------
T ss_pred             -----------chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccc-----------ccc------cccc
Confidence                       67999999999999988876   4899999999999776421100           000      1344


Q ss_pred             ceeHHHHHHHHHHhhccccc
Q 039049          223 FVHIDDVVGAHILAMEETRA  242 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~~  242 (305)
                      ++.++|+|+++++++..+..
T Consensus       229 ~~~p~dvA~~v~~l~s~~~~  248 (262)
T 3rkr_A          229 AIEPDDIADVVALLATQADQ  248 (262)
T ss_dssp             CCCHHHHHHHHHHHHTCCTT
T ss_pred             CCCHHHHHHHHHHHhcCccc
Confidence            68999999999999987554

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.92  E-value=2.5e-24  Score=179.77  Aligned_cols=197  Identities=11%  Similarity=0.052  Sum_probs=149.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+|+||||+|+||+++++.|++.|++|++++|+.........  .......++.++++|+.|.+++.++++       ++
T Consensus        32 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~--~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  109 (272)
T 1yb1_A           32 EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAA--KCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV  109 (272)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHH--HHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence            689999999999999999999999999999998653322211  111113478999999999988887765       78


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |+||||||......    ..+.+...+++|+.++.++++.+.    +. +.++||++||..++.+.+.            
T Consensus       110 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~------------  176 (272)
T 1yb1_A          110 SILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN-NHGHIVTVASAAGHVSVPF------------  176 (272)
T ss_dssp             SEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCCC-CCCHHH------------
T ss_pred             cEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEEechhhcCCCCC------------
Confidence            99999999865432    234556789999999888877764    34 6689999999876543211            


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc------CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCC
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC------GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTT  220 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~------~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (305)
                               ...|+.+|.+.|.+.+.++.+.      +++++++||+.+.++....   ..    .            ..
T Consensus       177 ---------~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~---~~----~------------~~  228 (272)
T 1yb1_A          177 ---------LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN---PS----T------------SL  228 (272)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC---TH----H------------HH
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc---cc----c------------cc
Confidence                     1669999999999999888764      7999999999998875321   00    0            02


Q ss_pred             ccceeHHHHHHHHHHhhcccc
Q 039049          221 VGFVHIDDVVGAHILAMEETR  241 (305)
Q Consensus       221 ~~~i~v~D~a~~~~~~~~~~~  241 (305)
                      ..+++++|+|++++.+++.+.
T Consensus       229 ~~~~~~~dva~~i~~~~~~~~  249 (272)
T 1yb1_A          229 GPTLEPEEVVNRLMHGILTEQ  249 (272)
T ss_dssp             CCCCCHHHHHHHHHHHHHTTC
T ss_pred             cCCCCHHHHHHHHHHHHHcCC
Confidence            347899999999999998753

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.92  E-value=2.7e-23  Score=175.88  Aligned_cols=212  Identities=20%  Similarity=0.152  Sum_probs=151.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      ++|+||||+|+||+++++.|+++|++|++++|+.+.......  .+.....++.++++|+.|.+++.++++       ++
T Consensus        32 k~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~--~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  109 (301)
T 3tjr_A           32 RAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVN--GLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGV  109 (301)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--HHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence            579999999999999999999999999999998764433221  111224478999999999998888775       78


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKK----AKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |+||||||......    ..+.+...+++|+.++.++++++..    .+...+||++||...+.+.+..           
T Consensus       110 d~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-----------  178 (301)
T 3tjr_A          110 DVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGL-----------  178 (301)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTB-----------
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCc-----------
Confidence            99999999875432    4556778999999999999998743    3124699999998765432211           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHH---HHhcCC-CCCC--
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILA---MVKGLR-GEYP--  217 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~---~~~~~~-~~~~--  217 (305)
                                ..|+.||.+.+.+.+.++.+.   |+++++++||.+..+....     ......   .....+ ..++  
T Consensus       179 ----------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-----~~~~~~~~~~~~~~~~~~~~~~  243 (301)
T 3tjr_A          179 ----------GTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSN-----SERIRGADYGMSATPEGAFGPL  243 (301)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHH-----HHHHC-----------------
T ss_pred             ----------hHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccc-----cccccchhhccccChhhhcccc
Confidence                      679999999999998888764   7999999999998763110     000000   000000 0011  


Q ss_pred             CCCccceeHHHHHHHHHHhhcccc
Q 039049          218 NTTVGFVHIDDVVGAHILAMEETR  241 (305)
Q Consensus       218 ~~~~~~i~v~D~a~~~~~~~~~~~  241 (305)
                      .....+++++|+|++++.+++.+.
T Consensus       244 ~~~~~~~~pedvA~~i~~~l~~~~  267 (301)
T 3tjr_A          244 PTQDESVSADDVARLTADAILANR  267 (301)
T ss_dssp             -----CCCHHHHHHHHHHHHHHTC
T ss_pred             ccccCCCCHHHHHHHHHHHHhcCC
Confidence            114568999999999999998753

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.92  E-value=1.4e-23  Score=174.07  Aligned_cols=207  Identities=15%  Similarity=0.125  Sum_probs=148.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|++.|++|++++|+.+........  +.....++.++.+|+.|.+++.++++       ++
T Consensus         5 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~--l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   82 (264)
T 3tfo_A            5 KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATE--IRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI   82 (264)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH--HHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH--HHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            6799999999999999999999999999999986544332211  11123478899999999998887765       78


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKK----AKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |++|||||......    ..+.+...+++|+.++.++.+++..    . +..+||++||...+.+.+..           
T Consensus        83 D~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~IV~isS~~~~~~~~~~-----------  150 (264)
T 3tfo_A           83 DVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQ-RSGQIINIGSIGALSVVPTA-----------  150 (264)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTCCCTTC-----------
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEEcCHHHcccCCCC-----------
Confidence            99999999875432    4556778899999999988887643    3 55799999998765432221           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc-CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcccee
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC-GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVH  225 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  225 (305)
                                ..|+.||...+.+.+.++.+. ++++..++||.+..+.........          ...........+..
T Consensus       151 ----------~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~~~~----------~~~~~~~~~~~~~~  210 (264)
T 3tfo_A          151 ----------AVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTITHEE----------TMAAMDTYRAIALQ  210 (264)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC---------------------------------CCC
T ss_pred             ----------hhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccccccchh----------HHHHHHhhhccCCC
Confidence                      669999999999999988776 899999999999876532110000          00000000122578


Q ss_pred             HHHHHHHHHHhhccccc
Q 039049          226 IDDVVGAHILAMEETRA  242 (305)
Q Consensus       226 v~D~a~~~~~~~~~~~~  242 (305)
                      ++|+|++++++++.+..
T Consensus       211 pedvA~~v~~l~s~~~~  227 (264)
T 3tfo_A          211 PADIARAVRQVIEAPQS  227 (264)
T ss_dssp             HHHHHHHHHHHHHSCTT
T ss_pred             HHHHHHHHHHHhcCCcc
Confidence            99999999999998765

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.92  E-value=7.7e-24  Score=173.09  Aligned_cols=198  Identities=13%  Similarity=0.090  Sum_probs=147.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc---------
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ---------   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---------   72 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+++....            ...++++|+.|.+++.++++         
T Consensus         4 k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~------------~~~~~~~D~~~~~~~~~~~~~~~~~~~~g   71 (236)
T 1ooe_A            4 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD------------SNILVDGNKNWTEQEQSILEQTASSLQGS   71 (236)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS------------EEEECCTTSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCcccccc------------ccEEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999998764221            35677899999888877664         


Q ss_pred             CCCEEEEeccccccCC-----CCchhhhhhhhhHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           73 GVDGVFHTASPVLVPY-----DNNIQATLIDPCIKGTLNVLSSCKKAK-SVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      ++|+||||||......     ..+.+...+++|+.++.++++++...- ...+||++||...+.+.+.            
T Consensus        72 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~------------  139 (236)
T 1ooe_A           72 QVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPS------------  139 (236)
T ss_dssp             CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT------------
T ss_pred             CCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCCC------------
Confidence            7899999999765321     234567789999999999999987641 1258999999876533211            


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc-----CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC-----GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTV  221 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (305)
                         .      ..|+.+|...+.+.+.++.+.     ++++++++|+.+.++..           ......      ....
T Consensus       140 ---~------~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~-----------~~~~~~------~~~~  193 (236)
T 1ooe_A          140 ---M------IGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMN-----------RKWMPN------ADHS  193 (236)
T ss_dssp             ---B------HHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHH-----------HHHSTT------CCGG
T ss_pred             ---c------HHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcch-----------hhcCCC------cccc
Confidence               1      679999999999999988765     49999999999987631           111111      1134


Q ss_pred             cceeHHHHHHHHHHhhcccc----cCceEEEe
Q 039049          222 GFVHIDDVVGAHILAMEETR----ASGRLICS  249 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~~----~~~~~~~~  249 (305)
                      .++..+|+|++++.++..+.    .+..+.+.
T Consensus       194 ~~~~~~dvA~~i~~~l~s~~~~~~~G~~~~v~  225 (236)
T 1ooe_A          194 SWTPLSFISEHLLKWTTETSSRPSSGALLKIT  225 (236)
T ss_dssp             GCBCHHHHHHHHHHHHHCGGGCCCTTCEEEEE
T ss_pred             ccCCHHHHHHHHHHHHcCCCcccccccEEEEe
Confidence            46789999999986663322    24456664

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.91  E-value=1.1e-23  Score=174.13  Aligned_cols=215  Identities=13%  Similarity=0.048  Sum_probs=148.3

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHh-------cC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAI-------QG   73 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-------~~   73 (305)
                      ||+++||||+|+||+++++.|+++|++|++++|+.++......+...   ..++..+  |   .+++.+++       .+
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~---~~~~~~~--d---~~~v~~~~~~~~~~~g~   72 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET---YPQLKPM--S---EQEPAELIEAVTSAYGQ   72 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHH---CTTSEEC--C---CCSHHHHHHHHHHHHSC
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCcEEEE--C---HHHHHHHHHHHHHHhCC
Confidence            88999999999999999999999999999999987654332222111   1233333  4   44444433       37


Q ss_pred             CCEEEEecccc-ccC----CCCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCC
Q 039049           74 VDGVFHTASPV-LVP----YDNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNES  144 (305)
Q Consensus        74 ~d~Vi~~a~~~-~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~  144 (305)
                      +|+||||||.. ...    ...+.+...+++|+.++.++++++.    +. +..+||++||...+.+.+.          
T Consensus        73 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~----------  141 (254)
T 1zmt_A           73 VDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKR-KSGHIIFITSATPFGPWKE----------  141 (254)
T ss_dssp             CCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCSTTTSCCTT----------
T ss_pred             CCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECCcccccCCCC----------
Confidence            89999999986 322    1345677889999999999998874    33 5579999999875433211          


Q ss_pred             CCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCch-----HHHHHHHHhcCCCCC
Q 039049          145 HWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTST-----LLLILAMVKGLRGEY  216 (305)
Q Consensus       145 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~-----~~~~~~~~~~~~~~~  216 (305)
                           .      ..|+.||...+.+.+.++.+.   ++++++++|+.++|+.........     ...........+   
T Consensus       142 -----~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p---  207 (254)
T 1zmt_A          142 -----L------STYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTA---  207 (254)
T ss_dssp             -----C------HHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSS---
T ss_pred             -----c------hHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCC---
Confidence                 1      679999999999999888774   899999999999887643221111     011111111111   


Q ss_pred             CCCCccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          217 PNTTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       217 ~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                         ...+.+++|+|+++++++....   .+..+++.+.
T Consensus       208 ---~~~~~~p~dvA~~v~~l~s~~~~~~tG~~~~vdgG  242 (254)
T 1zmt_A          208 ---LQRLGTQKELGELVAFLASGSCDYLTGQVFWLAGG  242 (254)
T ss_dssp             ---SSSCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTT
T ss_pred             ---CCCCcCHHHHHHHHHHHhCcccCCccCCEEEECCC
Confidence               2347899999999999987643   2445777654

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.91  E-value=1.3e-23  Score=174.05  Aligned_cols=213  Identities=20%  Similarity=0.198  Sum_probs=157.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc------CCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ------GVD   75 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------~~d   75 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.+....     ..   ..++.++++|+.|.+++.++++      ++|
T Consensus        10 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-----~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id   81 (257)
T 3tl3_A           10 AVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVA-----DL---GDRARFAAADVTDEAAVASALDLAETMGTLR   81 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHH-----HT---CTTEEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHH-----hc---CCceEEEECCCCCHHHHHHHHHHHHHhCCCC
Confidence            679999999999999999999999999999995432111     11   3478999999999998888776      789


Q ss_pred             EEEEeccccccC--------CCCchhhhhhhhhHHHHHHHHHHHHhc-----------CCccEEEEeccceeeeccCCCC
Q 039049           76 GVFHTASPVLVP--------YDNNIQATLIDPCIKGTLNVLSSCKKA-----------KSVKRVVLTSSCSSIRYRHDAQ  136 (305)
Q Consensus        76 ~Vi~~a~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~-----------~~~~~~v~~SS~~~~~~~~~~~  136 (305)
                      ++|||||.....        ...+.+...+++|+.++.++++++...           .+..++|++||...+.+.+.  
T Consensus        82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--  159 (257)
T 3tl3_A           82 IVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIG--  159 (257)
T ss_dssp             EEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHHH--
T ss_pred             EEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCCC--
Confidence            999999975421        245667889999999999999988643           13458999999876543211  


Q ss_pred             CCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCC
Q 039049          137 QVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLR  213 (305)
Q Consensus       137 ~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~  213 (305)
                                         ...|+.||...+.+.+.++.++   +++++.++|+.+..+.....   ............+
T Consensus       160 -------------------~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~~  217 (257)
T 3tl3_A          160 -------------------QAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASL---PEEARASLGKQVP  217 (257)
T ss_dssp             -------------------HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC------CHHHHHHHHHTSS
T ss_pred             -------------------CccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhc---cHHHHHHHHhcCC
Confidence                               1669999999999998888764   79999999999988764321   1112222222222


Q ss_pred             CCCCCCCccceeHHHHHHHHHHhhcccccCc-eEEEecC
Q 039049          214 GEYPNTTVGFVHIDDVVGAHILAMEETRASG-RLICSSS  251 (305)
Q Consensus       214 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~~  251 (305)
                      .     ...+.+++|+|++++++++.+...| .+++.|.
T Consensus       218 ~-----~~r~~~p~dva~~v~~l~s~~~itG~~i~vdGG  251 (257)
T 3tl3_A          218 H-----PSRLGNPDEYGALAVHIIENPMLNGEVIRLDGA  251 (257)
T ss_dssp             S-----SCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             C-----CCCccCHHHHHHHHHHHhcCCCCCCCEEEECCC
Confidence            1     1458899999999999998755444 5777543

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.91  E-value=1.7e-23  Score=172.65  Aligned_cols=213  Identities=16%  Similarity=0.111  Sum_probs=153.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhh-hhhccCccCceEEEEccC--CCcchHHHHhc------
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGF-LWELNGAEERLKIMKADL--LMEGSFDEAIQ------   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~D~--~d~~~~~~~~~------   72 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.+....... +...  ...++.++.+|+  .|.+++.++++      
T Consensus        13 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   90 (252)
T 3f1l_A           13 RIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEE--TGRQPQWFILDLLTCTSENCQQLAQRIAVNY   90 (252)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--HSCCCEEEECCTTTCCHHHHHHHHHHHHHHC
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh--cCCCceEEEEecccCCHHHHHHHHHHHHHhC
Confidence            579999999999999999999999999999998654332211 1111  122678999999  88887777665      


Q ss_pred             -CCCEEEEeccccccC-----CCCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccC
Q 039049           73 -GVDGVFHTASPVLVP-----YDNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLN  142 (305)
Q Consensus        73 -~~d~Vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  142 (305)
                       ++|++|||||.....     ...+.+...+++|+.++.++++++    ++. +..+||++||...+.+.+..       
T Consensus        91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~~~~~~-------  162 (252)
T 3f1l_A           91 PRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKS-DAGSLVFTSSSVGRQGRANW-------  162 (252)
T ss_dssp             SCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTS-SSCEEEEECCGGGTSCCTTC-------
T ss_pred             CCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHC-CCCEEEEECChhhccCCCCC-------
Confidence             689999999975321     134556788999999999999988    344 56799999998754432111       


Q ss_pred             CCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcC--CcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCC
Q 039049          143 ESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCG--IDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTT  220 (305)
Q Consensus       143 E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (305)
                                    ..|+.||...+.+.+.++.+++  +++..+.|+.+..+.           ........      ..
T Consensus       163 --------------~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~-----------~~~~~~~~------~~  211 (252)
T 3f1l_A          163 --------------GAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAM-----------RASAFPTE------DP  211 (252)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHH-----------HHHHCTTC------CG
T ss_pred             --------------chhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCch-----------hhhhCCcc------ch
Confidence                          6799999999999999988864  889999999886542           11111111      13


Q ss_pred             ccceeHHHHHHHHHHhhccccc---CceEEEe-cCCcCH
Q 039049          221 VGFVHIDDVVGAHILAMEETRA---SGRLICS-SSVAHW  255 (305)
Q Consensus       221 ~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~-~~~~s~  255 (305)
                      ..+..++|+|.++++++.....   +..+++. |...++
T Consensus       212 ~~~~~p~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~~  250 (252)
T 3f1l_A          212 QKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQPGRKPGI  250 (252)
T ss_dssp             GGSBCTGGGHHHHHHHHSGGGTTCCSCEEESSCC-----
T ss_pred             hccCCHHHHHHHHHHHcCccccCCCCCEEEeCCCcCCCC
Confidence            4578899999999999976542   4567775 444444

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.91  E-value=1.8e-23  Score=175.53  Aligned_cols=223  Identities=13%  Similarity=0.020  Sum_probs=158.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+....... ..........++.++.+|+.|.+++.++++       ++
T Consensus        30 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  108 (283)
T 1g0o_A           30 KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEE-VVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKL  108 (283)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHH-HHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHH-HHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            6799999999999999999999999999999986432110 011111123478899999999988877664       68


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCCCcccCCCCCCCc
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA-KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDP  149 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~  149 (305)
                      |+||||||......    ..+.+...+++|+.++.++++++... .+.++||++||...+.+...              +
T Consensus       109 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  174 (283)
T 1g0o_A          109 DIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVP--------------K  174 (283)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCS--------------S
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCCC--------------C
Confidence            99999999865432    34567788999999999999998764 24479999999764332110              0


Q ss_pred             ccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCC-------CC-CchHHHHHHHHh--cCCCCC
Q 039049          150 DYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAP-------QP-TSTLLLILAMVK--GLRGEY  216 (305)
Q Consensus       150 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~-------~~-~~~~~~~~~~~~--~~~~~~  216 (305)
                      .      ..|+.||...+.+.+.++.+   .++++++++|+.+.++....       .. ............  ..+   
T Consensus       175 ~------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---  245 (283)
T 1g0o_A          175 H------AVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSP---  245 (283)
T ss_dssp             C------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCT---
T ss_pred             C------cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCC---
Confidence            1      67999999999999988866   48999999999998863110       00 000111122222  111   


Q ss_pred             CCCCccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          217 PNTTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       217 ~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                         ...+.+++|+|+++++++....   .+..+++.|.
T Consensus       246 ---~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdgG  280 (283)
T 1g0o_A          246 ---LRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGG  280 (283)
T ss_dssp             ---TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ---CCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCC
Confidence               3457899999999999998643   2445777543

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.91  E-value=5.8e-23  Score=174.99  Aligned_cols=225  Identities=12%  Similarity=0.068  Sum_probs=158.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCc---------ccchhhh-hhccCccCceEEEEccCCCcchHHHHh
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPED---------LSKVGFL-WELNGAEERLKIMKADLLMEGSFDEAI   71 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~---------~~~~~~~-~~~~~~~~~~~~~~~D~~d~~~~~~~~   71 (305)
                      |+++||||+|+||+++++.|++.|++|++++|+...         ....... ........++.++++|+.|.+++.+++
T Consensus        47 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~  126 (317)
T 3oec_A           47 KVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAVV  126 (317)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHH
Confidence            579999999999999999999999999999886321         1111111 111122457899999999999888877


Q ss_pred             c-------CCCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCC
Q 039049           72 Q-------GVDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKK----AKSVKRVVLTSSCSSIRYRHDAQ  136 (305)
Q Consensus        72 ~-------~~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~  136 (305)
                      +       ++|++|||||......    ..+.+...+++|+.++.++++++..    .+...+||++||...+.+.+.. 
T Consensus       127 ~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~-  205 (317)
T 3oec_A          127 DEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQ-  205 (317)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCCTTB-
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCCCCC-
Confidence            5       6899999999876432    4556778899999999999988743    2124689999998765432211 


Q ss_pred             CCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCC----------CCchHH
Q 039049          137 QVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQ----------PTSTLL  203 (305)
Q Consensus       137 ~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~----------~~~~~~  203 (305)
                                          ..|+.||...+.+.+.++.++   |++++.++|+.+.++.....          ......
T Consensus       206 --------------------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  265 (317)
T 3oec_A          206 --------------------SHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTRE  265 (317)
T ss_dssp             --------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHH
T ss_pred             --------------------cchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchh
Confidence                                679999999999999998774   89999999999988742110          000000


Q ss_pred             HHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          204 LILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      ........    .......|++++|+|+++++++....   .+..+++.|.
T Consensus       266 ~~~~~~~~----~~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG  312 (317)
T 3oec_A          266 DAAELFSQ----LTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGG  312 (317)
T ss_dssp             HHHHHHTT----TCSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHhh----hccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcc
Confidence            00111111    01113678999999999999987543   3556888654

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.91  E-value=1.2e-23  Score=173.38  Aligned_cols=202  Identities=15%  Similarity=0.113  Sum_probs=148.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhh-hhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGF-LWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |+++||||+|+||+++++.|++.|++|++++|+.+....... +........++.++++|+.|.+++.++++       +
T Consensus         8 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   87 (250)
T 3nyw_A            8 GLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYGA   87 (250)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            579999999999999999999999999999998764433222 21111112478899999999988887765       6


Q ss_pred             CCEEEEeccccccCC---CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           74 VDGVFHTASPVLVPY---DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      +|++|||||......   ..+.+...+++|+.++.++++++.    +. +..++|++||...+.+...            
T Consensus        88 iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~------------  154 (250)
T 3nyw_A           88 VDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQ-KNGYIFNVASRAAKYGFAD------------  154 (250)
T ss_dssp             EEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC-------CC------------
T ss_pred             CCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEEccHHhcCCCCC------------
Confidence            899999999865432   234567789999999999998873    34 5579999999876543211            


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                         .      ..|+.||.+.+.+.+.++.++   ++++..++||.+..+.           ....  ...    .....+
T Consensus       155 ---~------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~-----------~~~~--~~~----~~~~~~  208 (250)
T 3nyw_A          155 ---G------GIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDM-----------AKKA--GTP----FKDEEM  208 (250)
T ss_dssp             ---T------THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHH-----------HHHT--TCC----SCGGGS
T ss_pred             ---C------cchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCch-----------hhhc--CCC----cccccC
Confidence               1      669999999999999888774   8999999999987652           1111  111    113558


Q ss_pred             eeHHHHHHHHHHhhccccc
Q 039049          224 VHIDDVVGAHILAMEETRA  242 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~~  242 (305)
                      ++++|+|+++++++..+..
T Consensus       209 ~~p~dva~~v~~l~s~~~~  227 (250)
T 3nyw_A          209 IQPDDLLNTIRCLLNLSEN  227 (250)
T ss_dssp             BCHHHHHHHHHHHHTSCTT
T ss_pred             CCHHHHHHHHHHHHcCCCc
Confidence            9999999999999987654

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.91  E-value=1.7e-23  Score=172.22  Aligned_cols=204  Identities=18%  Similarity=0.164  Sum_probs=145.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.+.......  ..   ..++.++++|+.|.+++.++++       ++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~--~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   75 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKD--EL---GDNLYIAQLDVRNRAAIEEMLASLPAEWCNI   75 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HH---CTTEEEEECCTTCHHHHHHHHHTSCTTTCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--Hh---cCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            579999999999999999999999999999998653322111  11   1368899999999999988875       57


Q ss_pred             CEEEEeccccc-c----CCCCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           75 DGVFHTASPVL-V----PYDNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        75 d~Vi~~a~~~~-~----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      |++|||||... .    ....+.+...+++|+.++.++.+++.    +. +.++||++||...+.+.+.           
T Consensus        76 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~~~~~-----------  143 (248)
T 3asu_A           76 DILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER-NHGHIINIGSTAGSWPYAG-----------  143 (248)
T ss_dssp             CEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCCTT-----------
T ss_pred             CEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEEccchhccCCCC-----------
Confidence            99999999753 1    11445677899999999999998875    34 5679999999875432211           


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceec-CCCCCCCCchHHHHHHHHhcCCCCCCCCCc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVG-PLLAPQPTSTLLLILAMVKGLRGEYPNTTV  221 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (305)
                          .      ..|+.||...+.+.+.++.+.   ++++++++|+.+.| +................       .  ...
T Consensus       144 ----~------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~-------~--~~~  204 (248)
T 3asu_A          144 ----G------NVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKT-------Y--QNT  204 (248)
T ss_dssp             ----C------HHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC-------------------------------
T ss_pred             ----C------chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCchHHHHHH-------H--hcc
Confidence                1      679999999999999988764   89999999999984 43211000000000000       0  012


Q ss_pred             cceeHHHHHHHHHHhhcccc
Q 039049          222 GFVHIDDVVGAHILAMEETR  241 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~~  241 (305)
                      .++.++|+|+++++++..+.
T Consensus       205 ~~~~p~dvA~~v~~l~s~~~  224 (248)
T 3asu_A          205 VALTPEDVSEAVWWVSTLPA  224 (248)
T ss_dssp             CCBCHHHHHHHHHHHHHSCT
T ss_pred             CCCCHHHHHHHHHHHhcCCc
Confidence            34799999999999998643

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.91  E-value=3.7e-23  Score=170.14  Aligned_cols=208  Identities=19%  Similarity=0.214  Sum_probs=151.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.+.......  .+.....++.++++|+.|.+++.++++       ++
T Consensus         8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~--~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   85 (247)
T 2jah_A            8 KVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGD--ELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGL   85 (247)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--HHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            679999999999999999999999999999998654332211  111113478899999999998887765       78


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      |++|||||......    ..+.+...+++|+.++.++++++...   .+ ++||++||...+.+.+.             
T Consensus        86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~-------------  151 (247)
T 2jah_A           86 DILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRN-------------  151 (247)
T ss_dssp             SEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTT-------------
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCC-------------
Confidence            99999999764322    34566778999999999999887542   14 79999999875433211             


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccce
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFV  224 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  224 (305)
                        .      ..|+.||...+.+.+.++.+   .|+++++++|+.+.++.........   ........+     +...++
T Consensus       152 --~------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~---~~~~~~~~~-----~~~~~~  215 (247)
T 2jah_A          152 --A------AVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTA---TKEMYEQRI-----SQIRKL  215 (247)
T ss_dssp             --C------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHH---HHHHHHHHT-----TTSCCB
T ss_pred             --C------cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchh---hHHHHHhcc-----cccCCC
Confidence              1      67999999999998888766   4899999999999887532211111   111111111     112258


Q ss_pred             eHHHHHHHHHHhhcccc
Q 039049          225 HIDDVVGAHILAMEETR  241 (305)
Q Consensus       225 ~v~D~a~~~~~~~~~~~  241 (305)
                      .++|+|+++++++..+.
T Consensus       216 ~pedvA~~v~~l~s~~~  232 (247)
T 2jah_A          216 QAQDIAEAVRYAVTAPH  232 (247)
T ss_dssp             CHHHHHHHHHHHHHSCT
T ss_pred             CHHHHHHHHHHHhCCCc
Confidence            99999999999998653

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.91  E-value=2e-23  Score=174.72  Aligned_cols=227  Identities=12%  Similarity=0.066  Sum_probs=159.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCC----------cccchhhh-hhccCccCceEEEEccCCCcchHHHH
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPE----------DLSKVGFL-WELNGAEERLKIMKADLLMEGSFDEA   70 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~----------~~~~~~~~-~~~~~~~~~~~~~~~D~~d~~~~~~~   70 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+..          +....... ........++.++++|+.|.+++.++
T Consensus        12 k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   91 (277)
T 3tsc_A           12 RVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRKV   91 (277)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence            57999999999999999999999999999998532          11111111 11122245789999999999988887


Q ss_pred             hc-------CCCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCC
Q 039049           71 IQ-------GVDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKK----AKSVKRVVLTSSCSSIRYRHDA  135 (305)
Q Consensus        71 ~~-------~~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~  135 (305)
                      ++       ++|++|||||......    ..+.+...+++|+.++.++++++..    .+...+||++||...+.+.+..
T Consensus        92 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  171 (277)
T 3tsc_A           92 VDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFM  171 (277)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCSSC
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCCCCc
Confidence            65       5899999999876532    4566788899999999999988643    2124689999998765432211


Q ss_pred             CCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcC
Q 039049          136 QQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGL  212 (305)
Q Consensus       136 ~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~  212 (305)
                                           ..|+.||.+.+.+.+.++.++   ++++..++|+.+.++.....  .............
T Consensus       172 ---------------------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~  228 (277)
T 3tsc_A          172 ---------------------IHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGD--MVTAVGQAMETNP  228 (277)
T ss_dssp             ---------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHH--HHHHHHHHHHTCG
T ss_pred             ---------------------hhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccch--hhhhhhhcccccH
Confidence                                 679999999999999988774   79999999999988753210  0001111111111


Q ss_pred             C--CCCCC-CCccceeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          213 R--GEYPN-TTVGFVHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       213 ~--~~~~~-~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      .  ..+.. ....+.+++|+|+++++++.....   +..+++.|.
T Consensus       229 ~~~~~~~~~~p~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  273 (277)
T 3tsc_A          229 QLSHVLTPFLPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQG  273 (277)
T ss_dssp             GGTTTTCCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHhhhccCCCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCC
Confidence            1  11111 123489999999999999976542   456777654

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.91  E-value=5.4e-23  Score=170.96  Aligned_cols=219  Identities=18%  Similarity=0.134  Sum_probs=154.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCc-ccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPED-LSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |+++||||+|+||+++++.|++.|++|++..++... .......  ......++.++++|+.|.+++.++++       +
T Consensus        28 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  105 (267)
T 3u5t_A           28 KVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGK--IEAAGGKALTAQADVSDPAAVRRLFATAEEAFGG  105 (267)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHH--HHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH--HHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            579999999999999999999999999998665432 2221111  11223478899999999998888775       6


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCCCcccCCCCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA-KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSD  148 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~  148 (305)
                      +|++|||||......    ..+.+...+++|+.++.++++++... ....++|++||.....+.+..             
T Consensus       106 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------------  172 (267)
T 3u5t_A          106 VDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHPSY-------------  172 (267)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCTTC-------------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCCCc-------------
Confidence            899999999875432    34456778899999999999887654 123589999998754432211             


Q ss_pred             cccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcccee
Q 039049          149 PDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVH  225 (305)
Q Consensus       149 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  225 (305)
                              ..|+.||.+.+.+.+.++.++   ++++..++||.+..+.......  ...........+      ...+..
T Consensus       173 --------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~p------~~r~~~  236 (267)
T 3u5t_A          173 --------GIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKS--DEVRDRFAKLAP------LERLGT  236 (267)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-------------CHHHHHTSST------TCSCBC
T ss_pred             --------hHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCC--HHHHHHHHhcCC------CCCCcC
Confidence                    679999999999999998885   7999999999998775322110  011112222211      456789


Q ss_pred             HHHHHHHHHHhhccccc---CceEEEecC
Q 039049          226 IDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       226 v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      ++|+|+++++++.....   +..+++.|.
T Consensus       237 pedvA~~v~~L~s~~~~~itG~~i~vdGG  265 (267)
T 3u5t_A          237 PQDIAGAVAFLAGPDGAWVNGQVLRANGG  265 (267)
T ss_dssp             HHHHHHHHHHHHSTTTTTCCSEEEEESSS
T ss_pred             HHHHHHHHHHHhCccccCccCCEEEeCCC
Confidence            99999999999975442   445777554

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.91  E-value=1.5e-23  Score=169.82  Aligned_cols=201  Identities=17%  Similarity=0.123  Sum_probs=152.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc---CCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ---GVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~Vi   78 (305)
                      |+++||||+|+||+++++.|+++|++|+++.|+..                      +|+.|++++.++++   ++|++|
T Consensus         7 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~----------------------~D~~~~~~v~~~~~~~g~id~lv   64 (223)
T 3uce_A            7 TVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG----------------------LDISDEKSVYHYFETIGAFDHLI   64 (223)
T ss_dssp             EEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT----------------------CCTTCHHHHHHHHHHHCSEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc----------------------cCCCCHHHHHHHHHHhCCCCEEE
Confidence            46999999999999999999999999999987642                      79999998888875   689999


Q ss_pred             EeccccccC-----CCCchhhhhhhhhHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCCCcccCCCCCCCcccc
Q 039049           79 HTASPVLVP-----YDNNIQATLIDPCIKGTLNVLSSCKKAK-SVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYC  152 (305)
Q Consensus        79 ~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~  152 (305)
                      ||||.....     ...+.+...+++|+.++.++++++...- ...++|++||...+.+.+..                 
T Consensus        65 ~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~-----------------  127 (223)
T 3uce_A           65 VTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVANT-----------------  127 (223)
T ss_dssp             ECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCTTC-----------------
T ss_pred             ECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCCCc-----------------
Confidence            999976321     2455677789999999999999987641 12489999998764432211                 


Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHcC-CcEEEEecCceecCCCCCCCCchH-HHHHHHHhcCCCCCCCCCccceeHHHHH
Q 039049          153 KHYNLWYAYAKTIAEKEAWRIAKDCG-IDMVVVNPSFVVGPLLAPQPTSTL-LLILAMVKGLRGEYPNTTVGFVHIDDVV  230 (305)
Q Consensus       153 ~~~~~~Y~~sK~~~E~~~~~~~~~~~-~~~~i~Rp~~v~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~v~D~a  230 (305)
                          ..|+.+|...+.+.+.++.+++ +++..++|+.+.++.......... .+........+      ...+.+++|+|
T Consensus       128 ----~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dvA  197 (223)
T 3uce_A          128 ----YVKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLP------VGKVGEASDIA  197 (223)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHST------TCSCBCHHHHH
T ss_pred             ----hHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCC------CCCccCHHHHH
Confidence                6799999999999999988865 999999999999886433221111 12222223322      45688999999


Q ss_pred             HHHHHhhccccc-CceEEEecC
Q 039049          231 GAHILAMEETRA-SGRLICSSS  251 (305)
Q Consensus       231 ~~~~~~~~~~~~-~~~~~~~~~  251 (305)
                      ++++++++.... +..+++.|.
T Consensus       198 ~~~~~l~~~~~~tG~~i~vdgG  219 (223)
T 3uce_A          198 MAYLFAIQNSYMTGTVIDVDGG  219 (223)
T ss_dssp             HHHHHHHHCTTCCSCEEEESTT
T ss_pred             HHHHHHccCCCCCCcEEEecCC
Confidence            999999986554 445777643

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.91  E-value=2.8e-23  Score=170.26  Aligned_cols=198  Identities=13%  Similarity=0.049  Sum_probs=148.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc---------
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ---------   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---------   72 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+++...            ....++++|+.|.+++.++++         
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g   75 (241)
T 1dhr_A            8 RRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------------SASVIVKMTDSFTEQADQVTAEVGKLLGDQ   75 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------------SEEEECCCCSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc------------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            67999999999999999999999999999999875422            134677899999988887764         


Q ss_pred             CCCEEEEeccccccCC-----CCchhhhhhhhhHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           73 GVDGVFHTASPVLVPY-----DNNIQATLIDPCIKGTLNVLSSCKKAK-SVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      ++|+||||||......     ..+.+...+++|+.++.++++++...- ...+||++||...+.+.+.            
T Consensus        76 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------  143 (241)
T 1dhr_A           76 KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPG------------  143 (241)
T ss_dssp             CEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT------------
T ss_pred             CCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCCC------------
Confidence            6899999999765321     234567788999999999999986641 1258999999876543211            


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc-----CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC-----GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTV  221 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (305)
                         .      ..|+.+|...+.+.+.++.+.     ++++++++|+.+-.+.           .......      ....
T Consensus       144 ---~------~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~-----------~~~~~~~------~~~~  197 (241)
T 1dhr_A          144 ---M------IGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM-----------NRKSMPE------ADFS  197 (241)
T ss_dssp             ---B------HHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH-----------HHHHSTT------SCGG
T ss_pred             ---c------hHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcc-----------ccccCcc------hhhc
Confidence               1      679999999999999887653     5999999999887652           1111011      1134


Q ss_pred             cceeHHHHHHHHHHhhccccc---CceEEEe
Q 039049          222 GFVHIDDVVGAHILAMEETRA---SGRLICS  249 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~~~---~~~~~~~  249 (305)
                      .++..+|+|++++.+++....   +..+.+.
T Consensus       198 ~~~~~~~vA~~v~~l~~~~~~~~~G~~~~v~  228 (241)
T 1dhr_A          198 SWTPLEFLVETFHDWITGNKRPNSGSLIQVV  228 (241)
T ss_dssp             GSEEHHHHHHHHHHHHTTTTCCCTTCEEEEE
T ss_pred             cCCCHHHHHHHHHHHhcCCCcCccceEEEEe
Confidence            568899999999999975432   4456664

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.91  E-value=1.4e-22  Score=173.33  Aligned_cols=217  Identities=14%  Similarity=0.066  Sum_probs=157.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEE-eCCCcccchhhhhhccCccCceEEEEccCCCcc---------------
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTV-RDPEDLSKVGFLWELNGAEERLKIMKADLLMEG---------------   65 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---------------   65 (305)
                      |++|||||+|+||+++++.|++.|++|++++ |+.+........... ....++.++++|+.|.+               
T Consensus        47 k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~  125 (328)
T 2qhx_A           47 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNA-RRPNSAITVQADLSNVATAPVSGADGSAPVTL  125 (328)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-HSTTCEEEEECCCSSSCBCC-------CCBCH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-hcCCeEEEEEeeCCCchhcccccccccccccc
Confidence            5799999999999999999999999999999 876433322111000 11347889999999998               


Q ss_pred             --hHHHHhc-------CCCEEEEeccccccCC----C--------------CchhhhhhhhhHHHHHHHHHHHHhc---C
Q 039049           66 --SFDEAIQ-------GVDGVFHTASPVLVPY----D--------------NNIQATLIDPCIKGTLNVLSSCKKA---K  115 (305)
Q Consensus        66 --~~~~~~~-------~~d~Vi~~a~~~~~~~----~--------------~~~~~~~~~~n~~~~~~l~~~~~~~---~  115 (305)
                        ++.++++       ++|+||||||......    .              .+.+...+++|+.++.++++++...   .
T Consensus       126 ~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~  205 (328)
T 2qhx_A          126 FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT  205 (328)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence              8887765       7899999999765432    2              4456678999999999999887532   1


Q ss_pred             C------ccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEec
Q 039049          116 S------VKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNP  186 (305)
Q Consensus       116 ~------~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp  186 (305)
                      +      .++||++||...+.+.+.               .      ..|+.+|.+.+.+.+.++.++   ++++++++|
T Consensus       206 ~~~~~~~~g~IV~isS~~~~~~~~~---------------~------~~Y~asKaal~~l~~~la~el~~~gIrvn~v~P  264 (328)
T 2qhx_A          206 PAKHRGTNYSIINMVDAMTNQPLLG---------------Y------TIYTMAKGALEGLTRSAALELAPLQIRVNGVGP  264 (328)
T ss_dssp             CGGGSCSCEEEEEECCTTTTSCCTT---------------C------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             CCcCCCCCcEEEEECchhhccCCCC---------------c------HHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEec
Confidence            3      579999999875433211               1      679999999999999888774   899999999


Q ss_pred             CceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCc-cceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          187 SFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTV-GFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       187 ~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      +.+.++. .. .   ...........+      .. .+..++|+|+++++++....   .+..+++.|.
T Consensus       265 G~v~T~~-~~-~---~~~~~~~~~~~p------~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG  322 (328)
T 2qhx_A          265 GLSVLVD-DM-P---PAVWEGHRSKVP------LYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGG  322 (328)
T ss_dssp             SSBSCCC-CS-C---HHHHHHHHTTCT------TTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CcccCCc-cc-c---HHHHHHHHhhCC------CCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence            9999886 21 1   222222222211      22 47899999999999997533   2445777544

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.91  E-value=1.1e-22  Score=171.15  Aligned_cols=217  Identities=16%  Similarity=0.069  Sum_probs=155.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCC-CcccchhhhhhccCccCceEEEEccCCC----cchHHHHhc----
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDP-EDLSKVGFLWELNGAEERLKIMKADLLM----EGSFDEAIQ----   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~d----~~~~~~~~~----   72 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+. +........... ....++.++++|+.|    .+++.++++    
T Consensus        24 k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~  102 (288)
T 2x9g_A           24 PAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNK-ERSNTAVVCQADLTNSNVLPASCEEIINSCFR  102 (288)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHH-HSTTCEEEEECCCSCSTTHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHh-hcCCceEEEEeecCCccCCHHHHHHHHHHHHH
Confidence            6799999999999999999999999999999987 433222111100 113478899999999    887777665    


Q ss_pred             ---CCCEEEEeccccccCC--------------CCchhhhhhhhhHHHHHHHHHHHHhcC---C------ccEEEEeccc
Q 039049           73 ---GVDGVFHTASPVLVPY--------------DNNIQATLIDPCIKGTLNVLSSCKKAK---S------VKRVVLTSSC  126 (305)
Q Consensus        73 ---~~d~Vi~~a~~~~~~~--------------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~------~~~~v~~SS~  126 (305)
                         ++|+||||||......              ..+.+...+++|+.++.++++++....   +      ..+||++||.
T Consensus       103 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~  182 (288)
T 2x9g_A          103 AFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDA  182 (288)
T ss_dssp             HHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEECCT
T ss_pred             hcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEecc
Confidence               7899999999765321              223456788999999999998875431   2      4689999998


Q ss_pred             eeeeccCCCCCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHH
Q 039049          127 SSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLL  203 (305)
Q Consensus       127 ~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~  203 (305)
                      ..+.+.+.               .      ..|+.||.+.+.+.+.++.++   ++++++++|+.++++. . . .  ..
T Consensus       183 ~~~~~~~~---------------~------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~-~--~~  236 (288)
T 2x9g_A          183 MVDQPCMA---------------F------SLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-M-G--EE  236 (288)
T ss_dssp             TTTSCCTT---------------C------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-S-C--HH
T ss_pred             cccCCCCC---------------C------chHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-c-C--hH
Confidence            75433211               1      669999999999998888774   8999999999999986 2 1 1  11


Q ss_pred             HHHHHHhcCCCCCCCCCccc-eeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          204 LILAMVKGLRGEYPNTTVGF-VHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~-i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      .........+      ...+ ..++|+|+++++++....   .+..+++.|.
T Consensus       237 ~~~~~~~~~p------~~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG  282 (288)
T 2x9g_A          237 EKDKWRRKVP------LGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGG  282 (288)
T ss_dssp             HHHHHHHTCT------TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHhhCC------CCCCCCCHHHHHHHHHHHhCccccCccCCEEEECcc
Confidence            1222222221      2234 789999999999997543   2445666543

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.91  E-value=2.3e-23  Score=174.45  Aligned_cols=212  Identities=15%  Similarity=0.106  Sum_probs=152.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhh-hhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGF-LWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |++|||||+|+||+++++.|++.|++|++++|+.+....... +....  ...+.++++|+.|.+++.++++       +
T Consensus        34 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  111 (281)
T 4dry_A           34 RIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRT--GNIVRAVVCDVGDPDQVAALFAAVRAEFAR  111 (281)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--SSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            579999999999999999999999999999998754332221 11111  1235899999999998887765       6


Q ss_pred             CCEEEEeccccccC-----CCCchhhhhhhhhHHHHHHHHHHHHhc---CC--ccEEEEeccceeeeccCCCCCCcccCC
Q 039049           74 VDGVFHTASPVLVP-----YDNNIQATLIDPCIKGTLNVLSSCKKA---KS--VKRVVLTSSCSSIRYRHDAQQVSPLNE  143 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~--~~~~v~~SS~~~~~~~~~~~~~~~~~E  143 (305)
                      +|++|||||.....     ...+.+...+++|+.++.++.+++...   .+  ..+||++||...+.+.+.         
T Consensus       112 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~---------  182 (281)
T 4dry_A          112 LDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPN---------  182 (281)
T ss_dssp             CSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTT---------
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCC---------
Confidence            79999999976432     245667789999999998888876432   12  469999999875443211         


Q ss_pred             CCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCC-
Q 039049          144 SHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNT-  219 (305)
Q Consensus       144 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  219 (305)
                            .      ..|+.||.+.+.+.+.++.+   .++++..++|+.+..+....           ............ 
T Consensus       183 ------~------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-----------~~~~~~~~~~~~~  239 (281)
T 4dry_A          183 ------S------APYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTAR-----------MSTGVLQANGEVA  239 (281)
T ss_dssp             ------C------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC------------------CEEECTTSCEE
T ss_pred             ------C------hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhh-----------hcchhhhhhhccc
Confidence                  1      67999999999999988876   48999999999998764221           111111111111 


Q ss_pred             CccceeHHHHHHHHHHhhcccccCceEE
Q 039049          220 TVGFVHIDDVVGAHILAMEETRASGRLI  247 (305)
Q Consensus       220 ~~~~i~v~D~a~~~~~~~~~~~~~~~~~  247 (305)
                      ...++.++|+|+++++++..+......+
T Consensus       240 ~~~~~~pedvA~~v~fL~s~~~~~~i~~  267 (281)
T 4dry_A          240 AEPTIPIEHIAEAVVYMASLPLSANVLT  267 (281)
T ss_dssp             ECCCBCHHHHHHHHHHHHHSCTTEEEEE
T ss_pred             ccCCCCHHHHHHHHHHHhCCCccCcccc
Confidence            3447899999999999999877655543

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.91  E-value=3.1e-23  Score=172.12  Aligned_cols=220  Identities=15%  Similarity=0.184  Sum_probs=154.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.+.......  .......++.++++|+.|++++.++++       ++
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   85 (262)
T 1zem_A            8 KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEA--SVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   85 (262)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--HHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            679999999999999999999999999999998654332211  111223468899999999988877665       78


Q ss_pred             CEEEEecccc-ccC----CCCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPV-LVP----YDNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~-~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |+||||||.. ...    ...+.+...+++|+.++.++++++...   .+.++||++||...+.+.+.            
T Consensus        86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------  153 (262)
T 1zem_A           86 DFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPN------------  153 (262)
T ss_dssp             CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTT------------
T ss_pred             CEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCC------------
Confidence            9999999976 221    134567788999999999999887542   14579999999876543211            


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCC------------CCchHH-HHHHHHh
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQ------------PTSTLL-LILAMVK  210 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~------------~~~~~~-~~~~~~~  210 (305)
                         .      ..|+.||...+.+.+.++.+   .++++++++|+.+..+.....            ...... .......
T Consensus       154 ---~------~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (262)
T 1zem_A          154 ---M------AAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIG  224 (262)
T ss_dssp             ---B------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHH
T ss_pred             ---C------chHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHh
Confidence               1      67999999999998888765   389999999999876531100            000001 1111111


Q ss_pred             cCCCCCCCCCccceeHHHHHHHHHHhhccccc---CceEEEec
Q 039049          211 GLRGEYPNTTVGFVHIDDVVGAHILAMEETRA---SGRLICSS  250 (305)
Q Consensus       211 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~  250 (305)
                      ..+      ...+..++|+|+++++++.....   +..+.+.|
T Consensus       225 ~~p------~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdG  261 (262)
T 1zem_A          225 SVP------MRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAG  261 (262)
T ss_dssp             TST------TSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESC
T ss_pred             cCC------CCCCcCHHHHHHHHHHHcCchhcCcCCcEEecCC
Confidence            111      23478899999999999875432   33455543

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.90  E-value=4.6e-23  Score=171.76  Aligned_cols=206  Identities=17%  Similarity=0.172  Sum_probs=144.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcC-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQG-------V   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-------~   74 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.+.......  .... ..++.++++|+.|.+++.++++.       +
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~--~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   98 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAG--ELSA-KTRVLPLTLDVRDRAAMSAAVDNLPEEFATL   98 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HHTT-TSCEEEEECCTTCHHHHHHHHHTCCGGGSSC
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--Hhhc-CCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            579999999999999999999999999999998654332211  1111 14788999999999999988764       5


Q ss_pred             CEEEEecccccc-C----CCCchhhhhhhhhHHHHHHHHHHHH----hcCCcc-EEEEeccceeeeccCCCCCCcccCCC
Q 039049           75 DGVFHTASPVLV-P----YDNNIQATLIDPCIKGTLNVLSSCK----KAKSVK-RVVLTSSCSSIRYRHDAQQVSPLNES  144 (305)
Q Consensus        75 d~Vi~~a~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~-~~v~~SS~~~~~~~~~~~~~~~~~E~  144 (305)
                      |++|||||.... .    ...+.+...+++|+.++.++.+++.    +. +.+ +||++||...+.+.+.          
T Consensus        99 D~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-~~g~~IV~isS~~~~~~~~~----------  167 (272)
T 2nwq_A           99 RGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAH-GAGASIVNLGSVAGKWPYPG----------  167 (272)
T ss_dssp             CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-CTTCEEEEECCGGGTSCCTT----------
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEeCCchhccCCCC----------
Confidence            999999997642 1    1345677889999999888877764    34 556 9999999875432211          


Q ss_pred             CCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCc
Q 039049          145 HWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTV  221 (305)
Q Consensus       145 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (305)
                           .      ..|+.+|...+.+.+.++.+   .++++++++|+.+.++................       ..  ..
T Consensus       168 -----~------~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~-------~~--~~  227 (272)
T 2nwq_A          168 -----S------HVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKT-------YA--GA  227 (272)
T ss_dssp             -----C------HHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC-----------------------------CC
T ss_pred             -----C------chHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchHHHHHh-------hc--cC
Confidence                 1      66999999999999988766   37999999999998875321100000000000       00  11


Q ss_pred             cceeHHHHHHHHHHhhcccc
Q 039049          222 GFVHIDDVVGAHILAMEETR  241 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~~  241 (305)
                      .++.++|+|+++++++..+.
T Consensus       228 ~~~~pedvA~~v~~l~s~~~  247 (272)
T 2nwq_A          228 HPIQPEDIAETIFWIMNQPA  247 (272)
T ss_dssp             CCBCHHHHHHHHHHHHTSCT
T ss_pred             CCCCHHHHHHHHHHHhCCCc
Confidence            24799999999999998643

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.90  E-value=1.9e-23  Score=171.80  Aligned_cols=204  Identities=19%  Similarity=0.167  Sum_probs=136.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcch---HHHHh---cCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGS---FDEAI---QGVD   75 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~---~~~~~---~~~d   75 (305)
                      |+++||||+|+||+++++.|++ |++|++++|+.+......   .    ..++.++.+|+.+.+.   +.+.+   .++|
T Consensus         6 k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~---~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id   77 (245)
T 3e9n_A            6 KIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALA---E----IEGVEPIESDIVKEVLEEGGVDKLKNLDHVD   77 (245)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHH---T----STTEEEEECCHHHHHHTSSSCGGGTTCSCCS
T ss_pred             CEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHH---h----hcCCcceecccchHHHHHHHHHHHHhcCCCC
Confidence            6799999999999999999987 999999999765433221   1    2368899999987632   22222   3689


Q ss_pred             EEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           76 GVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        76 ~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      +||||||......    ..+.+...+++|+.++.++.+++.    +. + .++|++||...+.+.+..            
T Consensus        78 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~-g~iv~isS~~~~~~~~~~------------  143 (245)
T 3e9n_A           78 TLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAA-S-GCVIYINSGAGNGPHPGN------------  143 (245)
T ss_dssp             EEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T-CEEEEEC----------C------------
T ss_pred             EEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-C-CeEEEEcCcccccCCCCc------------
Confidence            9999999876432    234566789999999888888764    33 3 689999998876543221            


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccce
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFV  224 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  224 (305)
                               ..|+.||.+.+.+.+.++.+   .++++++++||.+.++......       ......    .  ....++
T Consensus       144 ---------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-------~~~~~~----~--~~~~~~  201 (245)
T 3e9n_A          144 ---------TIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLM-------DSQGTN----F--RPEIYI  201 (245)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------------------------CCGGGS
T ss_pred             ---------hHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhh-------hhhhcc----c--ccccCC
Confidence                     67999999999999998876   4899999999999887532211       000000    0  135689


Q ss_pred             eHHHHHHHHHHhhcccccCceEEEe
Q 039049          225 HIDDVVGAHILAMEETRASGRLICS  249 (305)
Q Consensus       225 ~v~D~a~~~~~~~~~~~~~~~~~~~  249 (305)
                      +++|+|++++.+++.+..+..+|+.
T Consensus       202 ~p~dvA~~i~~l~~~~~~~~~~~i~  226 (245)
T 3e9n_A          202 EPKEIANAIRFVIDAGETTQITNVD  226 (245)
T ss_dssp             CHHHHHHHHHHHHTSCTTEEEEEEE
T ss_pred             CHHHHHHHHHHHHcCCCccceeeeE
Confidence            9999999999999988777777763

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.90  E-value=3.5e-23  Score=173.64  Aligned_cols=215  Identities=19%  Similarity=0.144  Sum_probs=156.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc------CCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ------GVD   75 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------~~d   75 (305)
                      ++++||||+|+||+++++.|+++|++|++++|+.+.......  ..   ..++.++++|+.|.+++.++++      ++|
T Consensus        31 k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~--~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id  105 (281)
T 3ppi_A           31 ASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALAD--EL---GNRAEFVSTNVTSEDSVLAAIEAANQLGRLR  105 (281)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HH---CTTEEEEECCTTCHHHHHHHHHHHTTSSEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH--Hh---CCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            579999999999999999999999999999998654332211  11   3478999999999998888775      579


Q ss_pred             EEEEecc-ccccC---------CCCchhhhhhhhhHHHHHHHHHHHHhc---------CCccEEEEeccceeeeccCCCC
Q 039049           76 GVFHTAS-PVLVP---------YDNNIQATLIDPCIKGTLNVLSSCKKA---------KSVKRVVLTSSCSSIRYRHDAQ  136 (305)
Q Consensus        76 ~Vi~~a~-~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~~v~~SS~~~~~~~~~~~  136 (305)
                      ++||+|+ .....         ...+.+...+++|+.++.++++++...         .+..+||++||...+.+.+.. 
T Consensus       106 ~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-  184 (281)
T 3ppi_A          106 YAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQ-  184 (281)
T ss_dssp             EEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCTTC-
T ss_pred             eEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCCCC-
Confidence            9999944 33221         123346788999999999999987532         134589999998765432211 


Q ss_pred             CCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCC
Q 039049          137 QVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLR  213 (305)
Q Consensus       137 ~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~  213 (305)
                                          ..|+.||.+.+.+.+.++.++   +++++.++|+.+..+.....   ............+
T Consensus       185 --------------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~---~~~~~~~~~~~~~  241 (281)
T 3ppi_A          185 --------------------TAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESV---GEEALAKFAANIP  241 (281)
T ss_dssp             --------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTT---CHHHHHHHHHTCC
T ss_pred             --------------------cccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcc---cHHHHHHHHhcCC
Confidence                                679999999999998888775   89999999999987642221   1112223333322


Q ss_pred             CCCCCCCccceeHHHHHHHHHHhhcccccCc-eEEEec
Q 039049          214 GEYPNTTVGFVHIDDVVGAHILAMEETRASG-RLICSS  250 (305)
Q Consensus       214 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~  250 (305)
                      .     ...+.+++|+|++++++++.....| .+++.|
T Consensus       242 ~-----~~~~~~pedvA~~v~~l~s~~~~tG~~i~vdG  274 (281)
T 3ppi_A          242 F-----PKRLGTPDEFADAAAFLLTNGYINGEVMRLDG  274 (281)
T ss_dssp             S-----SSSCBCHHHHHHHHHHHHHCSSCCSCEEEEST
T ss_pred             C-----CCCCCCHHHHHHHHHHHHcCCCcCCcEEEECC
Confidence            1     2568999999999999998755444 577754

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.90  E-value=2.3e-22  Score=166.24  Aligned_cols=220  Identities=14%  Similarity=0.150  Sum_probs=158.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCC-cccchhhhhhccCccCceEEEEccCCCcchHHHHhc--------
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPE-DLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--------   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--------   72 (305)
                      |+++||||+|+||+++++.|+++|++|+++.++.. .....  .........++.++.+|+.|.+.+.++++        
T Consensus         8 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (255)
T 3icc_A            8 KVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEET--VYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   85 (255)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHH--HHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHH--HHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhcc
Confidence            67999999999999999999999999998755433 22221  11122224478899999999888777664        


Q ss_pred             -----CCCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCCCcccC
Q 039049           73 -----GVDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA-KSVKRVVLTSSCSSIRYRHDAQQVSPLN  142 (305)
Q Consensus        73 -----~~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~  142 (305)
                           .+|++|||||......    ..+.+...+++|+.++.++++++... .+..++|++||...+.+.+..       
T Consensus        86 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~-------  158 (255)
T 3icc_A           86 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDF-------  158 (255)
T ss_dssp             HHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCTTB-------
T ss_pred             cccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCCCc-------
Confidence                 2899999999865432    34456778899999999999988654 123589999998765432211       


Q ss_pred             CCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCC
Q 039049          143 ESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNT  219 (305)
Q Consensus       143 E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (305)
                                    ..|+.||.+.+.+.+.++.++   ++++..++|+.+..+......... ..........+      
T Consensus       159 --------------~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-~~~~~~~~~~~------  217 (255)
T 3icc_A          159 --------------IAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDP-MMKQYATTISA------  217 (255)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSH-HHHHHHHHTST------
T ss_pred             --------------chhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccH-HHHHhhhccCC------
Confidence                          679999999999999888774   899999999999988654332221 11122222222      


Q ss_pred             CccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          220 TVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       220 ~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      ...+.+++|+|+++.+++....   .+..+++.|.
T Consensus       218 ~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG  252 (255)
T 3icc_A          218 FNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGG  252 (255)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             cCCCCCHHHHHHHHHHHhCcccCCccCCEEEecCC
Confidence            3567899999999999987543   2456777654

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.90  E-value=4e-22  Score=161.11  Aligned_cols=214  Identities=13%  Similarity=0.097  Sum_probs=159.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc---CCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ---GVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~Vi   78 (305)
                      |+++||||++.||+++++.|++.|.+|++.+|+.+.....        ...++..+++|++|+++++++++   ++|++|
T Consensus        12 K~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~--------~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLV   83 (242)
T 4b79_A           12 QQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP--------RHPRIRREELDITDSQRLQRLFEALPRLDVLV   83 (242)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC--------CCTTEEEEECCTTCHHHHHHHHHHCSCCSEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh--------hcCCeEEEEecCCCHHHHHHHHHhcCCCCEEE
Confidence            7899999999999999999999999999999987654321        23478899999999999988876   689999


Q ss_pred             EeccccccCC--CCchhhhhhhhhHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccc
Q 039049           79 HTASPVLVPY--DNNIQATLIDPCIKGTLNVLSSCKKA--KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKH  154 (305)
Q Consensus        79 ~~a~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  154 (305)
                      ||||...+..  ..+.++..+++|+.++..+.+++...  .+-.++|++||.....+.+..                   
T Consensus        84 NNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~-------------------  144 (242)
T 4b79_A           84 NNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSADR-------------------  144 (242)
T ss_dssp             ECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCCSSC-------------------
T ss_pred             ECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCCCCC-------------------
Confidence            9999865432  45678889999999999998876432  022689999998754332221                   


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHH
Q 039049          155 YNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVG  231 (305)
Q Consensus       155 ~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  231 (305)
                        ..|+.||.....+.+.++.++   |+++..+.||.+..|....... ............+      ..-+..++|+|.
T Consensus       145 --~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~-~~~~~~~~~~~~P------lgR~g~peeiA~  215 (242)
T 4b79_A          145 --PAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKA-DVEATRRIMQRTP------LARWGEAPEVAS  215 (242)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CC-CHHHHHHHHHTCT------TCSCBCHHHHHH
T ss_pred             --HHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccC-CHHHHHHHHhcCC------CCCCcCHHHHHH
Confidence              669999999999999888774   8999999999998775432222 1223333333332      334678999999


Q ss_pred             HHHHhhccccc---CceEEEecC
Q 039049          232 AHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       232 ~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      ++++++.....   +..+.+.|.
T Consensus       216 ~v~fLaSd~a~~iTG~~l~VDGG  238 (242)
T 4b79_A          216 AAAFLCGPGASFVTGAVLAVDGG  238 (242)
T ss_dssp             HHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHHhCchhcCccCceEEECcc
Confidence            99999976443   445666554

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.90  E-value=3.8e-22  Score=167.53  Aligned_cols=204  Identities=17%  Similarity=0.149  Sum_probs=151.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccch-----hhhhhccCccCceEEEEccCCCcchHHHHhc----
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKV-----GFLWELNGAEERLKIMKADLLMEGSFDEAIQ----   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----   72 (305)
                      |+++||||+|+||++++++|+++|++|++++|+.++..+.     ...........++.++++|+.|.+++.++++    
T Consensus        10 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   89 (285)
T 3sc4_A           10 KTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKTVE   89 (285)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            6799999999999999999999999999999987643221     0111112224478999999999998888775    


Q ss_pred             ---CCCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeecc-CCCCCCccc
Q 039049           73 ---GVDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYR-HDAQQVSPL  141 (305)
Q Consensus        73 ---~~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~-~~~~~~~~~  141 (305)
                         ++|++|||||......    ..+.+...+++|+.++.++.+++...   .+..+||++||...+.+. ..       
T Consensus        90 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~-------  162 (285)
T 3sc4_A           90 QFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLR-------  162 (285)
T ss_dssp             HHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGSC-------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCCC-------
Confidence               7899999999875432    34566778899999999999988554   145699999997754432 11       


Q ss_pred             CCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCC
Q 039049          142 NESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPN  218 (305)
Q Consensus       142 ~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (305)
                                    ...|+.||.+.+.+.+.++.+   .|+++..++|+.+....          +.........     
T Consensus       163 --------------~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~----------~~~~~~~~~~-----  213 (285)
T 3sc4_A          163 --------------PTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATA----------AVQNLLGGDE-----  213 (285)
T ss_dssp             --------------SHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCH----------HHHHHHTSCC-----
T ss_pred             --------------CchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccH----------HHHhhccccc-----
Confidence                          166999999999999999877   48999999998432211          1222222211     


Q ss_pred             CCccceeHHHHHHHHHHhhcccc
Q 039049          219 TTVGFVHIDDVVGAHILAMEETR  241 (305)
Q Consensus       219 ~~~~~i~v~D~a~~~~~~~~~~~  241 (305)
                      ....+..++|+|+++++++..+.
T Consensus       214 ~~~r~~~pedvA~~~~~l~s~~~  236 (285)
T 3sc4_A          214 AMARSRKPEVYADAAYVVLNKPS  236 (285)
T ss_dssp             CCTTCBCTHHHHHHHHHHHTSCT
T ss_pred             cccCCCCHHHHHHHHHHHhCCcc
Confidence            13457789999999999998754

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.90  E-value=2.2e-22  Score=167.49  Aligned_cols=219  Identities=14%  Similarity=0.077  Sum_probs=160.1

Q ss_pred             CcEEEeCCc--chHHHHHHHHHHHcCCeEEEEEeCCCcc-c-chhhhhhccCccCceEEEEccCCCcchHHHHhc-----
Q 039049            2 PEYCVTGGT--GFIAAHLVKALLDKGHMVRTTVRDPEDL-S-KVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-----   72 (305)
Q Consensus         2 ~~ilItG~~--G~iG~~l~~~l~~~g~~V~~~~r~~~~~-~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   72 (305)
                      |+++||||+  |+||+++++.|++.|++|+++.|+.... . ....+...  ...++.++++|+.|.+++.++++     
T Consensus        21 k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   98 (267)
T 3gdg_A           21 KVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKT--YGIKAKAYKCQVDSYESCEKLVKDVVAD   98 (267)
T ss_dssp             CEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHH--HCCCEECCBCCTTCHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHh--cCCceeEEecCCCCHHHHHHHHHHHHHH
Confidence            679999999  8999999999999999999999887643 1 12222211  13478999999999998887765     


Q ss_pred             --CCCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccC
Q 039049           73 --GVDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLN  142 (305)
Q Consensus        73 --~~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  142 (305)
                        ++|++|||||......    ..+.+...+++|+.++.++.+++    ++. +..++|++||...+.....        
T Consensus        99 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~--------  169 (267)
T 3gdg_A           99 FGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKER-GTGSLVITASMSGHIANFP--------  169 (267)
T ss_dssp             TSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCCSS--------
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHc-CCceEEEEccccccccCCC--------
Confidence              5799999999876532    44567789999999999999987    444 5579999999775433210        


Q ss_pred             CCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcC--CcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCC
Q 039049          143 ESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCG--IDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTT  220 (305)
Q Consensus       143 E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (305)
                           .+.      ..|+.||.+.+.+.+.++.+++  +++..+.|+.+..+.....   ............+      .
T Consensus       170 -----~~~------~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~~------~  229 (267)
T 3gdg_A          170 -----QEQ------TSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFV---PKETQQLWHSMIP------M  229 (267)
T ss_dssp             -----SCC------HHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGS---CHHHHHHHHTTST------T
T ss_pred             -----CCC------CcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhC---CHHHHHHHHhcCC------C
Confidence                 011      6799999999999999988864  7899999999987653221   1112222222222      4


Q ss_pred             ccceeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          221 VGFVHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       221 ~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      ..+.+++|+|+++++++.....   +..+++.|.
T Consensus       230 ~r~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG  263 (267)
T 3gdg_A          230 GRDGLAKELKGAYVYFASDASTYTTGADLLIDGG  263 (267)
T ss_dssp             SSCEETHHHHHHHHHHHSTTCTTCCSCEEEESTT
T ss_pred             CCCcCHHHHHhHhheeecCccccccCCEEEECCc
Confidence            5688999999999999975432   445777643

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.90  E-value=2.1e-23  Score=172.99  Aligned_cols=222  Identities=14%  Similarity=0.080  Sum_probs=154.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhh-hccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLW-ELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |+++||||+|+||+++++.|++.|++|+++.|...+......+. .......++.++++|+.|.+++.++++       +
T Consensus        12 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   91 (262)
T 3ksu_A           12 KVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEFGK   91 (262)
T ss_dssp             CEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHHCS
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            57999999999999999999999999999988754433322221 222234578999999999998888775       6


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCCCcccCCCCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA-KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSD  148 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~  148 (305)
                      +|++|||||......    ..+.+...+++|+.++.++++++... .+..++|++||...+.+.+..             
T Consensus        92 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~-------------  158 (262)
T 3ksu_A           92 VDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGFY-------------  158 (262)
T ss_dssp             EEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCCC-------------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCCC-------------
Confidence            899999999775432    35567778999999999999998764 134689999998765543221             


Q ss_pred             cccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcccee
Q 039049          149 PDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVH  225 (305)
Q Consensus       149 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  225 (305)
                              ..|+.||.+.+.+.+.++.++   ++++..++||.+..+........  .........      .....+..
T Consensus       159 --------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~~------~~~~r~~~  222 (262)
T 3ksu_A          159 --------STYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETK--ESTAFHKSQ------AMGNQLTK  222 (262)
T ss_dssp             --------CC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC--------------------CCCCSCC
T ss_pred             --------chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCch--HHHHHHHhc------CcccCCCC
Confidence                    559999999999999998885   79999999999876532111000  000000000      11345789


Q ss_pred             HHHHHHHHHHhhcccc--cCceEEEecCC
Q 039049          226 IDDVVGAHILAMEETR--ASGRLICSSSV  252 (305)
Q Consensus       226 v~D~a~~~~~~~~~~~--~~~~~~~~~~~  252 (305)
                      ++|+|+++++++....  .+..+++.|..
T Consensus       223 pedvA~~v~~L~s~~~~itG~~i~vdGg~  251 (262)
T 3ksu_A          223 IEDIAPIIKFLTTDGWWINGQTIFANGGY  251 (262)
T ss_dssp             GGGTHHHHHHHHTTTTTCCSCEEEESTTC
T ss_pred             HHHHHHHHHHHcCCCCCccCCEEEECCCc
Confidence            9999999999998621  24457786553

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.90  E-value=9.4e-23  Score=171.44  Aligned_cols=201  Identities=14%  Similarity=0.070  Sum_probs=146.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhh-hhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGF-LWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      ++|+||||+|+||+++++.|+++|++|++++|+.+....... +...  ...++.++.+|+.|.+++.++++       +
T Consensus        29 k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  106 (286)
T 1xu9_A           29 KKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLEL--GAASAHYIAGTMEDMTFAEQFVAQAGKLMGG  106 (286)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--TCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh--CCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            679999999999999999999999999999998654332211 1111  11368899999999988877765       7


Q ss_pred             CCEEEEe-ccccccCC---CCchhhhhhhhhHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           74 VDGVFHT-ASPVLVPY---DNNIQATLIDPCIKGTLNVLSSCKKA--KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        74 ~d~Vi~~-a~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      +|+|||| |+......   ..+.+...+++|+.++.++++++...  .+.++||++||...+.+.+.             
T Consensus       107 iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------  173 (286)
T 1xu9_A          107 LDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPM-------------  173 (286)
T ss_dssp             CSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTT-------------
T ss_pred             CCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCCC-------------
Confidence            8999999 56543321   34456778999999999999887542  02369999999875433211             


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHHc-----CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKDC-----GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                        .      ..|+.||.+.+.+.+.+..+.     ++++++++||.+.++..           .....+      .....
T Consensus       174 --~------~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~-----------~~~~~~------~~~~~  228 (286)
T 1xu9_A          174 --V------AAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETA-----------MKAVSG------IVHMQ  228 (286)
T ss_dssp             --C------HHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHH-----------HHHSCG------GGGGG
T ss_pred             --c------cHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhH-----------HHhccc------cccCC
Confidence              1      679999999999998887654     89999999999876521           111111      11345


Q ss_pred             ceeHHHHHHHHHHhhccccc
Q 039049          223 FVHIDDVVGAHILAMEETRA  242 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~~  242 (305)
                      +++++|+|+.++.+++.+..
T Consensus       229 ~~~~~~vA~~i~~~~~~~~~  248 (286)
T 1xu9_A          229 AAPKEECALEIIKGGALRQE  248 (286)
T ss_dssp             CBCHHHHHHHHHHHHHTTCS
T ss_pred             CCCHHHHHHHHHHHHhcCCc
Confidence            78999999999999987543

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.90  E-value=7.9e-22  Score=161.11  Aligned_cols=222  Identities=16%  Similarity=0.130  Sum_probs=160.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |.++||||++.||+++++.|++.|.+|++..|+.+...+...  .+...+.++.++++|++|+++++++++       ++
T Consensus         8 KvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~--~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i   85 (254)
T 4fn4_A            8 KVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQ--ELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRI   85 (254)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHH--HHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            789999999999999999999999999999998765443222  122234578999999999998888764       68


Q ss_pred             CEEEEeccccccC-----CCCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVP-----YDNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |++|||||.....     .+.+.++..+++|+.++..+.+++...   .+-.++|++||.....+.+..           
T Consensus        86 DiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~-----------  154 (254)
T 4fn4_A           86 DVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAG-----------  154 (254)
T ss_dssp             CEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSC-----------
T ss_pred             CEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCC-----------
Confidence            9999999965431     245678889999999999998887432   145699999998754332221           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                                ..|+.||.....+.+.++.++   |+++..+.||.+-.+....................+ .    ..-+
T Consensus       155 ----------~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~-~----~~R~  219 (254)
T 4fn4_A          155 ----------APYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMS-L----SSRL  219 (254)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHT-T----CCCC
T ss_pred             ----------hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCC-C----CCCC
Confidence                      669999999999999888774   899999999999877543322222211222221111 1    2336


Q ss_pred             eeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          224 VHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      ..++|+|.++++++.....   +..+.+.|.
T Consensus       220 g~pediA~~v~fLaSd~a~~iTG~~i~VDGG  250 (254)
T 4fn4_A          220 AEPEDIANVIVFLASDEASFVNGDAVVVDGG  250 (254)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHHhCchhcCCcCCEEEeCCC
Confidence            7899999999999975443   344666543

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.90  E-value=7.2e-22  Score=166.32  Aligned_cols=216  Identities=14%  Similarity=0.059  Sum_probs=156.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEE-eCCCcccchh-hhhhccCccCceEEEEccCCCcc--------------
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTV-RDPEDLSKVG-FLWELNGAEERLKIMKADLLMEG--------------   65 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~-r~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~--------------   65 (305)
                      |+++||||+|+||+++++.|+++|++|++++ |+.+...... .+..  ....++.++++|+.|.+              
T Consensus        10 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   87 (291)
T 1e7w_A           10 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNA--RRPNSAITVQADLSNVATAPVSGADGSAPVT   87 (291)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH--HSTTCEEEEECCCSSSCBCCCC----CCCBC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhh--hcCCeeEEEEeecCCcccccccccccccccc
Confidence            6799999999999999999999999999999 8764333221 1110  11347899999999998              


Q ss_pred             ---hHHHHhc-------CCCEEEEeccccccCC----C--------------CchhhhhhhhhHHHHHHHHHHHHhc---
Q 039049           66 ---SFDEAIQ-------GVDGVFHTASPVLVPY----D--------------NNIQATLIDPCIKGTLNVLSSCKKA---  114 (305)
Q Consensus        66 ---~~~~~~~-------~~d~Vi~~a~~~~~~~----~--------------~~~~~~~~~~n~~~~~~l~~~~~~~---  114 (305)
                         ++.++++       ++|++|||||......    .              .+.+...+++|+.++.++++++...   
T Consensus        88 ~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~  167 (291)
T 1e7w_A           88 LFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAG  167 (291)
T ss_dssp             HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence               8887765       7899999999765332    2              4456778999999999999887532   


Q ss_pred             CC------ccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEe
Q 039049          115 KS------VKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVN  185 (305)
Q Consensus       115 ~~------~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~R  185 (305)
                      .+      ..+||++||...+.+.+.               .      ..|+.||...+.+.+.++.+.   +++++.++
T Consensus       168 ~~~~~~~~~g~Iv~isS~~~~~~~~~---------------~------~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~  226 (291)
T 1e7w_A          168 TPAKHRGTNYSIINMVDAMTNQPLLG---------------Y------TIYTMAKGALEGLTRSAALELAPLQIRVNGVG  226 (291)
T ss_dssp             SCGGGSCSCEEEEEECCTTTTSCCTT---------------C------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred             cCCCCCCCCcEEEEEechhhcCCCCC---------------C------chhHHHHHHHHHHHHHHHHHHHhcCeEEEEEe
Confidence            13      579999999875433211               1      679999999999998888764   89999999


Q ss_pred             cCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCc-cceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          186 PSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTV-GFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       186 p~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      |+.+..+. .  ..  ...........+      .. .+..++|+|+++++++....   .+..+++.|.
T Consensus       227 PG~v~T~~-~--~~--~~~~~~~~~~~p------~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG  285 (291)
T 1e7w_A          227 PGLSVLVD-D--MP--PAVWEGHRSKVP------LYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGG  285 (291)
T ss_dssp             ESSBCCGG-G--SC--HHHHHHHHTTCT------TTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             eCCccCCc-c--CC--HHHHHHHHhhCC------CCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCC
Confidence            99997775 2  11  222222222211      22 47889999999999997543   2445666543

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.89  E-value=6.2e-22  Score=165.88  Aligned_cols=218  Identities=16%  Similarity=0.120  Sum_probs=154.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.+......   ..  ...++.++++|+.|.+++.++++       ++
T Consensus         6 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~---~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   80 (281)
T 3zv4_A            6 EVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELE---VA--HGGNAVGVVGDVRSLQDQKRAAERCLAAFGKI   80 (281)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---HH--TBTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHH---HH--cCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            68999999999999999999999999999999865433221   11  13478999999999988877764       67


Q ss_pred             CEEEEeccccccCCC---------CchhhhhhhhhHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCCCcccCC
Q 039049           75 DGVFHTASPVLVPYD---------NNIQATLIDPCIKGTLNVLSSCKKA--KSVKRVVLTSSCSSIRYRHDAQQVSPLNE  143 (305)
Q Consensus        75 d~Vi~~a~~~~~~~~---------~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~E  143 (305)
                      |++|||||.......         .+.+...+++|+.++.++++++...  .+..++|++||...+.+.+..        
T Consensus        81 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--------  152 (281)
T 3zv4_A           81 DTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNGGG--------  152 (281)
T ss_dssp             CEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSSSC--------
T ss_pred             CEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCCCC--------
Confidence            999999997643211         1236678899999999999987543  012589999998755432211        


Q ss_pred             CCCCCcccccccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEecCceecCCCCCCCCchH-------HHHHHHHhcCCC
Q 039049          144 SHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC--GIDMVVVNPSFVVGPLLAPQPTSTL-------LLILAMVKGLRG  214 (305)
Q Consensus       144 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~i~Rp~~v~G~~~~~~~~~~~-------~~~~~~~~~~~~  214 (305)
                                   ..|+.||.+.+.+.+.++.++  .+++..++||.+..+..........       ..........+ 
T Consensus       153 -------------~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-  218 (281)
T 3zv4_A          153 -------------PLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLP-  218 (281)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCT-
T ss_pred             -------------chhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCC-
Confidence                         669999999999999998775  3999999999998875432111000       01111112211 


Q ss_pred             CCCCCCccceeHHHHHHHHHHhhcccc----cCceEEEecC
Q 039049          215 EYPNTTVGFVHIDDVVGAHILAMEETR----ASGRLICSSS  251 (305)
Q Consensus       215 ~~~~~~~~~i~v~D~a~~~~~~~~~~~----~~~~~~~~~~  251 (305)
                           ...+..++|+|.++++++..+.    .+..+++.|.
T Consensus       219 -----~~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG  254 (281)
T 3zv4_A          219 -----IGRMPALEEYTGAYVFFATRGDSLPATGALLNYDGG  254 (281)
T ss_dssp             -----TSSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSS
T ss_pred             -----CCCCCCHHHHHHHHHHhhcccccccccCcEEEECCC
Confidence                 3557899999999999998333    3445777554

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.89  E-value=6.6e-22  Score=169.92  Aligned_cols=214  Identities=14%  Similarity=0.134  Sum_probs=154.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccch-----hhhhhccCccCceEEEEccCCCcchHHHHhc----
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKV-----GFLWELNGAEERLKIMKADLLMEGSFDEAIQ----   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----   72 (305)
                      |++|||||+|.||+++++.|+++|++|++++|+.+...+.     ...........++.++++|+.|.+++.++++    
T Consensus        46 k~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~  125 (346)
T 3kvo_A           46 CTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIK  125 (346)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            5799999999999999999999999999999987643221     0111112224478899999999998888775    


Q ss_pred             ---CCCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccC
Q 039049           73 ---GVDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLN  142 (305)
Q Consensus        73 ---~~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~  142 (305)
                         ++|+||||||......    ..+.+...+++|+.++.++++++...   .+..+||++||...+.+....       
T Consensus       126 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~~-------  198 (346)
T 3kvo_A          126 KFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFK-------  198 (346)
T ss_dssp             HHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGTS-------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCCC-------
Confidence               7899999999865432    34567788999999999999998432   155799999998765431100       


Q ss_pred             CCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCC
Q 039049          143 ESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC--GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTT  220 (305)
Q Consensus       143 E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (305)
                            ..      ..|+.||...+.+.+.++.++  ++++..+.|+.+....          +.. ...+..     ..
T Consensus       199 ------~~------~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~----------~~~-~~~~~~-----~~  250 (346)
T 3kvo_A          199 ------QH------CAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTA----------AMD-MLGGPG-----IE  250 (346)
T ss_dssp             ------SS------HHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCH----------HHH-HHCC-------CG
T ss_pred             ------Cc------hHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccH----------HHH-hhcccc-----cc
Confidence                  01      679999999999999998875  7999999999633321          111 111111     13


Q ss_pred             ccceeHHHHHHHHHHhhcccc-cCceEEEec
Q 039049          221 VGFVHIDDVVGAHILAMEETR-ASGRLICSS  250 (305)
Q Consensus       221 ~~~i~v~D~a~~~~~~~~~~~-~~~~~~~~~  250 (305)
                      ..+..++|+|+++++++.... ..|.+.+.+
T Consensus       251 ~r~~~pedvA~~v~~L~s~~~~itG~~ivdg  281 (346)
T 3kvo_A          251 SQCRKVDIIADAAYSIFQKPKSFTGNFVIDE  281 (346)
T ss_dssp             GGCBCTHHHHHHHHHHHTSCTTCCSCEEEHH
T ss_pred             ccCCCHHHHHHHHHHHHhcCCCCCceEEECC
Confidence            457789999999999998722 244444543

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.89  E-value=3e-22  Score=164.80  Aligned_cols=200  Identities=16%  Similarity=0.129  Sum_probs=146.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccC--CCcchHHHHhc-------
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADL--LMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~--~d~~~~~~~~~-------   72 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+..+.......... ....++.++.+|+  .|.+++.++++       
T Consensus        15 k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~g   93 (247)
T 3i1j_A           15 RVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKS-AGQPQPLIIALNLENATAQQYRELAARVEHEFG   93 (247)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-TTSCCCEEEECCTTTCCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHh-cCCCCceEEEeccccCCHHHHHHHHHHHHHhCC
Confidence            6799999999999999999999999999999987644332211111 1123567788777  88877777654       


Q ss_pred             CCCEEEEeccccccC-----CCCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCC
Q 039049           73 GVDGVFHTASPVLVP-----YDNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNE  143 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E  143 (305)
                      ++|++|||||.....     ...+.+...+++|+.++.++++++.    +. +..++|++||...+.+.+..        
T Consensus        94 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~~--------  164 (247)
T 3i1j_A           94 RLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRS-EDASIAFTSSSVGRKGRANW--------  164 (247)
T ss_dssp             CCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS-SSEEEEEECCGGGTSCCTTC--------
T ss_pred             CCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCeEEEEcchhhcCCCCCc--------
Confidence            789999999975432     1345677889999999999999883    44 55799999998754332111        


Q ss_pred             CCCCCcccccccchhHHHHHHHHHHHHHHHHHHc----CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCC
Q 039049          144 SHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC----GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNT  219 (305)
Q Consensus       144 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (305)
                                   ..|+.+|.+.+.+.+.++.+.    ++++..++||.+..+.           ........      .
T Consensus       165 -------------~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~-----------~~~~~~~~------~  214 (247)
T 3i1j_A          165 -------------GAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGM-----------RAQAYPDE------N  214 (247)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHH-----------HHHHSTTS------C
T ss_pred             -------------chhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCcc-----------chhccccc------C
Confidence                         679999999999999888763    6899999999886542           11111111      1


Q ss_pred             CccceeHHHHHHHHHHhhcccc
Q 039049          220 TVGFVHIDDVVGAHILAMEETR  241 (305)
Q Consensus       220 ~~~~i~v~D~a~~~~~~~~~~~  241 (305)
                      ...+..++|+|+++++++....
T Consensus       215 ~~~~~~p~dva~~~~~l~s~~~  236 (247)
T 3i1j_A          215 PLNNPAPEDIMPVYLYLMGPDS  236 (247)
T ss_dssp             GGGSCCGGGGTHHHHHHHSGGG
T ss_pred             ccCCCCHHHHHHHHHHHhCchh
Confidence            3456789999999999997543

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.89  E-value=6.2e-22  Score=169.23  Aligned_cols=222  Identities=18%  Similarity=0.167  Sum_probs=152.9

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhh-c---cCccCceEEEEccCCCcchHHHHhcC---
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWE-L---NGAEERLKIMKADLLMEGSFDEAIQG---   73 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~---~~~~~~~~~~~~D~~d~~~~~~~~~~---   73 (305)
                      .|+|+||||+|+||+++++.|+++|++|+++.|+..+......... .   .....++.++++|+.|.+++.++++.   
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   81 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence            3679999999999999999999999999999887654433222111 1   11124789999999999999998874   


Q ss_pred             --CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCC
Q 039049           74 --VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNE  143 (305)
Q Consensus        74 --~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E  143 (305)
                        +|++|||||......    ..+.+...+++|+.++.++++++    ++. +.++||++||...+.+.+.         
T Consensus        82 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-~~g~IV~isS~~~~~~~~~---------  151 (327)
T 1jtv_A           82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRR-GSGRVLVTGSVGGLMGLPF---------  151 (327)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEEGGGTSCCTT---------
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEECCcccccCCCC---------
Confidence              899999999764321    34567789999999999999986    344 5689999999875433211         


Q ss_pred             CCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchH-----------HHHHHHH
Q 039049          144 SHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTL-----------LLILAMV  209 (305)
Q Consensus       144 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~-----------~~~~~~~  209 (305)
                                  ...|+.||...+.+.+.++.+   .++++++++|+.|..+..........           ..+....
T Consensus       152 ------------~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (327)
T 1jtv_A          152 ------------NDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYL  219 (327)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHH
T ss_pred             ------------ChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHH
Confidence                        167999999999999988875   58999999999998875332111100           0000000


Q ss_pred             hcCCCCCCCCCccceeHHHHHHHHHHhhcccccCceEE
Q 039049          210 KGLRGEYPNTTVGFVHIDDVVGAHILAMEETRASGRLI  247 (305)
Q Consensus       210 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~  247 (305)
                      ......+   .+-.+.++|+|++++.++..+.....|.
T Consensus       220 ~~~~~~~---~~~~~~pedvA~~i~~l~~~~~~~~~~~  254 (327)
T 1jtv_A          220 AHSKQVF---REAAQNPEEVAEVFLTALRAPKPTLRYF  254 (327)
T ss_dssp             HHHHHHH---HHHCBCHHHHHHHHHHHHHCSSCCSEEE
T ss_pred             HHHHHhh---hhcCCCHHHHHHHHHHHHcCCCCCeEEE
Confidence            0000000   0112689999999999998765444443

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.89  E-value=8.3e-22  Score=160.33  Aligned_cols=210  Identities=13%  Similarity=0.116  Sum_probs=155.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+|+||||++.||+++++.|++.|++|++.+|+.+...+      ......++.++++|+.|+++++++++       ++
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~------~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~i   76 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSAD------FAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRI   76 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH------HHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH------HHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            679999999999999999999999999999998653322      11224578899999999988887764       68


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCCCcccCCCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA--KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSD  148 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~  148 (305)
                      |++|||||......    ..+.++..+++|+.++..+.+++...  ++-.++|++||.....+.+..             
T Consensus        77 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~~~-------------  143 (247)
T 3ged_A           77 DVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEPDS-------------  143 (247)
T ss_dssp             CEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCTTC-------------
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCCCC-------------
Confidence            99999999766532    45678889999999999998877432  122689999998754433221             


Q ss_pred             cccccccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeH
Q 039049          149 PDYCKHYNLWYAYAKTIAEKEAWRIAKDC--GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHI  226 (305)
Q Consensus       149 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  226 (305)
                              ..|+.||.....+.+.++.++  ++++..+.||.+-.+.....       ........+      ..-+..+
T Consensus       144 --------~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~~-------~~~~~~~~P------l~R~g~p  202 (247)
T 3ged_A          144 --------EAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQEF-------TQEDCAAIP------AGKVGTP  202 (247)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC---C-------CHHHHHTST------TSSCBCH
T ss_pred             --------HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHHH-------HHHHHhcCC------CCCCcCH
Confidence                    669999999999999888775  79999999999866543211       112222222      2346789


Q ss_pred             HHHHHHHHHhhcccccCc-eEEEecC
Q 039049          227 DDVVGAHILAMEETRASG-RLICSSS  251 (305)
Q Consensus       227 ~D~a~~~~~~~~~~~~~~-~~~~~~~  251 (305)
                      +|+|.+++++++...-.| .+.+.|.
T Consensus       203 ediA~~v~fL~s~~~iTG~~i~VDGG  228 (247)
T 3ged_A          203 KDISNMVLFLCQQDFITGETIIVDGG  228 (247)
T ss_dssp             HHHHHHHHHHHHCSSCCSCEEEESTT
T ss_pred             HHHHHHHHHHHhCCCCCCCeEEECcC
Confidence            999999999997544444 4666543

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.88  E-value=1.5e-21  Score=162.95  Aligned_cols=203  Identities=14%  Similarity=0.129  Sum_probs=147.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccch----hh-hhhccCccCceEEEEccCCCcchHHHHhc----
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKV----GF-LWELNGAEERLKIMKADLLMEGSFDEAIQ----   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----   72 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.++....    .. .........++.++++|+.|.+++.++++    
T Consensus         7 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   86 (274)
T 3e03_A            7 KTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATVD   86 (274)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence            6899999999999999999999999999999987643211    11 11111124478899999999998887765    


Q ss_pred             ---CCCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccC
Q 039049           73 ---GVDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLN  142 (305)
Q Consensus        73 ---~~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~  142 (305)
                         ++|++|||||......    ..+.+...+++|+.++.++.+++...   .+..++|++||...+.+...        
T Consensus        87 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------  158 (274)
T 3e03_A           87 TFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWW--------  158 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHH--------
T ss_pred             HcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCC--------
Confidence               6899999999865432    34566778999999999999987432   15579999999876543100        


Q ss_pred             CCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCc-eecCCCCCCCCchHHHHHHHHhcCCCCCCC
Q 039049          143 ESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSF-VVGPLLAPQPTSTLLLILAMVKGLRGEYPN  218 (305)
Q Consensus       143 E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~-v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (305)
                            +     ....|+.||...+.+.+.++.++   |+++..++|+. +-.+..            ....+.      
T Consensus       159 ------~-----~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~------------~~~~~~------  209 (274)
T 3e03_A          159 ------G-----AHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAI------------NMLPGV------  209 (274)
T ss_dssp             ------H-----HCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-------------------CC------
T ss_pred             ------C-----CCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchh------------hhcccc------
Confidence                  0     01669999999999999888774   79999999995 433211            111111      


Q ss_pred             CCccceeHHHHHHHHHHhhcccc
Q 039049          219 TTVGFVHIDDVVGAHILAMEETR  241 (305)
Q Consensus       219 ~~~~~i~v~D~a~~~~~~~~~~~  241 (305)
                      ....+..++|+|+++++++....
T Consensus       210 ~~~~~~~pedvA~~v~~l~s~~~  232 (274)
T 3e03_A          210 DAAACRRPEIMADAAHAVLTREA  232 (274)
T ss_dssp             CGGGSBCTHHHHHHHHHHHTSCC
T ss_pred             cccccCCHHHHHHHHHHHhCccc
Confidence            13347889999999999997644

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.88  E-value=7.8e-21  Score=155.98  Aligned_cols=221  Identities=14%  Similarity=0.127  Sum_probs=159.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |.++||||++.||+++++.|++.|.+|++..|+.+.......+   .....++.++++|++|+++++++++       ++
T Consensus         8 KvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~---~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~i   84 (258)
T 4gkb_A            8 KVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDAL---AQRQPRATYLPVELQDDAQCRDAVAQTIATFGRL   84 (258)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHH---HHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHH---HhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            6899999999999999999999999999999987754333222   2224578999999999988877664       68


Q ss_pred             CEEEEeccccccCC---CCchhhhhhhhhHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCCCcccCCCCCCCc
Q 039049           75 DGVFHTASPVLVPY---DNNIQATLIDPCIKGTLNVLSSCKKA--KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDP  149 (305)
Q Consensus        75 d~Vi~~a~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~  149 (305)
                      |++|||||......   ..+.+...+++|+.++..+.+++...  .+-.++|++||.....+.+..              
T Consensus        85 DiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~--------------  150 (258)
T 4gkb_A           85 DGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQGNT--------------  150 (258)
T ss_dssp             CEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCCSSC--------------
T ss_pred             CEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCCCCc--------------
Confidence            99999999765432   45678889999999999998887432  022589999998765443221              


Q ss_pred             ccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCc---hHHHHHHHHhcCCCCCCCCCccc
Q 039049          150 DYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTS---TLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       150 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                             ..|+.||.....+.+.++.++   |+++..+.||.|-.+........   ............+.     .+-+
T Consensus       151 -------~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl-----g~R~  218 (258)
T 4gkb_A          151 -------SGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPL-----GRRF  218 (258)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTT-----TTSC
T ss_pred             -------hHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCC-----CCCC
Confidence                   679999999999999888764   89999999999987754322111   01112222222221     1357


Q ss_pred             eeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          224 VHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      ..++|+|.++++++.....   +..+.+.|.
T Consensus       219 g~peeiA~~v~fLaS~~a~~iTG~~i~VDGG  249 (258)
T 4gkb_A          219 TTPDEIADTAVFLLSPRASHTTGEWLFVDGG  249 (258)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHHhCchhcCccCCeEEECCC
Confidence            7899999999999875443   445677544

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.88  E-value=1e-21  Score=160.61  Aligned_cols=220  Identities=14%  Similarity=0.077  Sum_probs=160.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||++.||+++++.|++.|.+|++..|+.+...+...  .+...+.++.++++|++|+++++++++       ++
T Consensus        10 KvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~--~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   87 (255)
T 4g81_D           10 KTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVD--TLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHV   87 (255)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHH--HHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--HHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence            679999999999999999999999999999998654433221  222224578899999999998887764       57


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKK----AKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |++|||||......    ..+.++..+++|+.++..+.+++..    ..+..++|++||.....+.+..           
T Consensus        88 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~-----------  156 (255)
T 4g81_D           88 DILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTV-----------  156 (255)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTC-----------
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCc-----------
Confidence            99999999876543    4667889999999999999887632    2144699999998764443221           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                                ..|+.||.....+.+.++.++   |+++..+.||.+..+....... ............+      ..-+
T Consensus       157 ----------~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~-~~~~~~~~~~~~P------l~R~  219 (255)
T 4g81_D          157 ----------APYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIE-DKQFDSWVKSSTP------SQRW  219 (255)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHT-CHHHHHHHHHHST------TCSC
T ss_pred             ----------hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccC-CHHHHHHHHhCCC------CCCC
Confidence                      669999999999999888774   8999999999998764211000 0111222222222      2346


Q ss_pred             eeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          224 VHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      ..++|+|.++++++.....   +..+.+.|.
T Consensus       220 g~pediA~~v~fL~S~~a~~iTG~~i~VDGG  250 (255)
T 4g81_D          220 GRPEELIGTAIFLSSKASDYINGQIIYVDGG  250 (255)
T ss_dssp             BCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHHhCchhCCCcCCEEEECCC
Confidence            7889999999999875432   445677654

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.87  E-value=1.7e-21  Score=174.60  Aligned_cols=224  Identities=20%  Similarity=0.165  Sum_probs=159.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCe-EEEEEeCCCcccchhhh-hhccCccCceEEEEccCCCcchHHHHhcCC-----
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHM-VRTTVRDPEDLSKVGFL-WELNGAEERLKIMKADLLMEGSFDEAIQGV-----   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~-V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-----   74 (305)
                      ++||||||+|+||++++++|+++|++ |++++|+.........+ ..+...+.++.++.+|+.|.+++.++++++     
T Consensus       227 ~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~g~  306 (486)
T 2fr1_A          227 GTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVP  306 (486)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhcCC
Confidence            68999999999999999999999985 99999986532222111 112222447899999999999999988754     


Q ss_pred             -CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCc
Q 039049           75 -DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDP  149 (305)
Q Consensus        75 -d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~  149 (305)
                       |+|||+||......    ..+.....+++|+.++.++.+++... +.++||++||...+.+....              
T Consensus       307 ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~~~~~V~~SS~a~~~g~~g~--------------  371 (486)
T 2fr1_A          307 LSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-DLTAFVLFSSFASAFGAPGL--------------  371 (486)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-CCSEEEEEEEHHHHTCCTTC--------------
T ss_pred             CcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC-CCCEEEEEcChHhcCCCCCC--------------
Confidence             99999999876432    34566778899999999999999887 88999999998765443221              


Q ss_pred             ccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHH
Q 039049          150 DYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDV  229 (305)
Q Consensus       150 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  229 (305)
                             ..|+.+|...+.+.+.+. ..|+++++++|+.+.+++....          ....   .+......+++.+|+
T Consensus       372 -------~~Yaaaka~l~~la~~~~-~~gi~v~~i~pG~~~~~gm~~~----------~~~~---~~~~~g~~~i~~e~~  430 (486)
T 2fr1_A          372 -------GGYAPGNAYLDGLAQQRR-SDGLPATAVAWGTWAGSGMAEG----------PVAD---RFRRHGVIEMPPETA  430 (486)
T ss_dssp             -------TTTHHHHHHHHHHHHHHH-HTTCCCEEEEECCBC-------------------------CTTTTEECBCHHHH
T ss_pred             -------HHHHHHHHHHHHHHHHHH-hcCCeEEEEECCeeCCCcccch----------hHHH---HHHhcCCCCCCHHHH
Confidence                   569999999998877654 5699999999999887642110          0000   011123567999999


Q ss_pred             HHHHHHhhcccccCceEEEecCCcCHHHHHHHHHHh
Q 039049          230 VGAHILAMEETRASGRLICSSSVAHWSPIIEMLKAT  265 (305)
Q Consensus       230 a~~~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~  265 (305)
                      ++++..+++.+..  .+.+..  +.+..|...+...
T Consensus       431 a~~l~~~l~~~~~--~~~v~~--~d~~~~~~~~~~~  462 (486)
T 2fr1_A          431 CRALQNALDRAEV--CPIVID--VRWDRFLLAYTAQ  462 (486)
T ss_dssp             HHHHHHHHHTTCS--SCEECE--ECHHHHHHHHTSS
T ss_pred             HHHHHHHHhCCCC--eEEEEe--CCHHHHhhhhccc
Confidence            9999999987543  222222  4577776655443

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.87  E-value=2.6e-21  Score=160.37  Aligned_cols=210  Identities=17%  Similarity=0.125  Sum_probs=142.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--------~   73 (305)
                      |+++||||+|+||+++++.|+++|++|++++|+.+.......  .......++.++++|+.|.+++.++++        +
T Consensus         6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   83 (260)
T 2qq5_A            6 QVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQ--EAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGR   83 (260)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--HHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            679999999999999999999999999999998654322211  111113468899999999988777653        5


Q ss_pred             CCEEEEecc--cc-------cc--CCCCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCC
Q 039049           74 VDGVFHTAS--PV-------LV--PYDNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQV  138 (305)
Q Consensus        74 ~d~Vi~~a~--~~-------~~--~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~  138 (305)
                      +|++|||||  ..       .+  ....+.+...+++|+.++.++.+.+.    +. +.++||++||...+...      
T Consensus        84 id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~------  156 (260)
T 2qq5_A           84 LDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPA-GQGLIVVISSPGSLQYM------  156 (260)
T ss_dssp             CCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGG-TCCEEEEECCGGGTSCC------
T ss_pred             ceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhc-CCcEEEEEcChhhcCCC------
Confidence            799999994  22       11  11345677789999999988777664    34 55799999998653211      


Q ss_pred             cccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCC
Q 039049          139 SPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGE  215 (305)
Q Consensus       139 ~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  215 (305)
                                +.      ..|+.||...+.+.+.++.+   +++++++++||.+..+...................    
T Consensus       157 ----------~~------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~----  216 (260)
T 2qq5_A          157 ----------FN------VPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQ----  216 (260)
T ss_dssp             ----------SS------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC---------------------
T ss_pred             ----------CC------CchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHH----
Confidence                      11      66999999999999988765   48999999999998875322110000000000000    


Q ss_pred             CCCCCccceeHHHHHHHHHHhhccc
Q 039049          216 YPNTTVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       216 ~~~~~~~~i~v~D~a~~~~~~~~~~  240 (305)
                      .......+..++|+|+++++++..+
T Consensus       217 ~~~~~~~~~~pe~va~~v~~l~s~~  241 (260)
T 2qq5_A          217 FKSAFSSAETTELSGKCVVALATDP  241 (260)
T ss_dssp             -----CHHHHHHHHHHHHHHHHTCT
T ss_pred             HHhhhccCCCHHHHHHHHHHHhcCc
Confidence            0000122468999999999999765

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.87  E-value=6e-21  Score=162.27  Aligned_cols=215  Identities=16%  Similarity=0.106  Sum_probs=149.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccch-hhhhhccCccCceEEEEccCCCc-chHHHHhc-------
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKV-GFLWELNGAEERLKIMKADLLME-GSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~-------   72 (305)
                      ++|+||||+|+||+++++.|+++|++|++++|+..+..+. ..+...  ...++.++++|+.|. +.+.++++       
T Consensus        13 k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g   90 (311)
T 3o26_A           13 RCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNS--NHENVVFHQLDVTDPIATMSSLADFIKTHFG   90 (311)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TCCSEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             cEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCCceEEEEccCCCcHHHHHHHHHHHHHhCC
Confidence            5799999999999999999999999999999987643322 112111  134789999999998 76666554       


Q ss_pred             CCCEEEEeccccccC----------------------------------CCCchhhhhhhhhHHHHHHHHHHHHhc---C
Q 039049           73 GVDGVFHTASPVLVP----------------------------------YDNNIQATLIDPCIKGTLNVLSSCKKA---K  115 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~----------------------------------~~~~~~~~~~~~n~~~~~~l~~~~~~~---~  115 (305)
                      ++|+||||||.....                                  ...+.+...+++|+.++.++++++...   .
T Consensus        91 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~  170 (311)
T 3o26_A           91 KLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLS  170 (311)
T ss_dssp             SCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS
T ss_pred             CCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhccC
Confidence            789999999986421                                  123445667999999999998887431   1


Q ss_pred             CccEEEEeccceeeeccCCCCC----------------------------CcccCCCCCCCcccccccchhHHHHHHHHH
Q 039049          116 SVKRVVLTSSCSSIRYRHDAQQ----------------------------VSPLNESHWSDPDYCKHYNLWYAYAKTIAE  167 (305)
Q Consensus       116 ~~~~~v~~SS~~~~~~~~~~~~----------------------------~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E  167 (305)
                      +.++||++||...+.+......                            .....+..++.+.      ..|+.||.+.+
T Consensus       171 ~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~Y~~SK~a~~  244 (311)
T 3o26_A          171 DSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFG------AAYTTSKACLN  244 (311)
T ss_dssp             SSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSC------HHHHHHHHHHH
T ss_pred             CCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccc------hhhHHHHHHHH
Confidence            5579999999876543211000                            0001111111111      66999999999


Q ss_pred             HHHHHHHHHc-CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhccccc--Cc
Q 039049          168 KEAWRIAKDC-GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRA--SG  244 (305)
Q Consensus       168 ~~~~~~~~~~-~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~  244 (305)
                      .+.+.++.++ +++++.++||.|..+....                        ......++.++.++.++..+..  .+
T Consensus       245 ~~~~~la~e~~~i~v~~v~PG~v~T~~~~~------------------------~~~~~~~~~a~~~~~~~~~~~~~~~g  300 (311)
T 3o26_A          245 AYTRVLANKIPKFQVNCVCPGLVKTEMNYG------------------------IGNYTAEEGAEHVVRIALFPDDGPSG  300 (311)
T ss_dssp             HHHHHHHHHCTTSEEEEECCCSBCSGGGTT------------------------CCSBCHHHHHHHHHHHHTCCSSCCCS
T ss_pred             HHHHHHHhhcCCceEEEecCCceecCCcCC------------------------CCCCCHHHHHHHHHHHHhCCCCCCCc
Confidence            9999999886 6999999999997764211                        1125788899999888775543  33


Q ss_pred             eEEE
Q 039049          245 RLIC  248 (305)
Q Consensus       245 ~~~~  248 (305)
                      .|..
T Consensus       301 ~~~~  304 (311)
T 3o26_A          301 FFYD  304 (311)
T ss_dssp             CEET
T ss_pred             eEec
Confidence            4443

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.87  E-value=1.1e-20  Score=155.77  Aligned_cols=218  Identities=18%  Similarity=0.113  Sum_probs=157.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |.++||||++.||+++++.|++.|.+|++.+|+.+...+..  ...   ..++..+++|+.|+++++++++       ++
T Consensus        30 KvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~--~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i  104 (273)
T 4fgs_A           30 KIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAI--AEI---GGGAVGIQADSANLAELDRLYEKVKAEAGRI  104 (273)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--HHH---CTTCEEEECCTTCHHHHHHHHHHHHHHHSCE
T ss_pred             CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--HHc---CCCeEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            56999999999999999999999999999999876443221  111   3467899999999998888764       57


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCCCcccCCCCCCCc
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKAK-SVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDP  149 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~  149 (305)
                      |++|||||......    ..+.++..+++|+.++..+.+++...- .-.++|++||.....+.+..              
T Consensus       105 DiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~~--------------  170 (273)
T 4fgs_A          105 DVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPAF--------------  170 (273)
T ss_dssp             EEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTTC--------------
T ss_pred             CEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCCc--------------
Confidence            99999999866533    466788999999999999999885531 22479999998754332221              


Q ss_pred             ccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCch----HHHHHHHHhcCCCCCCCCCcc
Q 039049          150 DYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTST----LLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       150 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~  222 (305)
                             ..|+.||.....+.+.++.++   |+++..+.||.+-.+.........    ..+...+....+      ..-
T Consensus       171 -------~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~P------lgR  237 (273)
T 4fgs_A          171 -------SVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVP------MGR  237 (273)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHST------TSS
T ss_pred             -------hHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCC------CCC
Confidence                   669999999999999998775   799999999999877533221111    112222322222      234


Q ss_pred             ceeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          223 FVHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      +..++|+|.++++++.....   +..+.+.|.
T Consensus       238 ~g~peeiA~~v~FLaSd~a~~iTG~~i~VDGG  269 (273)
T 4fgs_A          238 VGRAEEVAAAALFLASDDSSFVTGAELFVDGG  269 (273)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHhCchhcCccCCeEeECcC
Confidence            67899999999999976443   445666543

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.87  E-value=1e-20  Score=153.14  Aligned_cols=218  Identities=15%  Similarity=0.125  Sum_probs=158.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi~   79 (305)
                      |.++||||++.||+++++.|++.|.+|++..|+..+ .....   ......++..+++|+.|++.++++++  ++|++||
T Consensus        10 KvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~-~~~~~---~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVN   85 (247)
T 4hp8_A           10 RKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPD-ETLDI---IAKDGGNASALLIDFADPLAAKDSFTDAGFDILVN   85 (247)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCH-HHHHH---HHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEE
T ss_pred             CEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHH-HHHHH---HHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEE
Confidence            679999999999999999999999999999997642 11111   22234578999999999998888776  6899999


Q ss_pred             eccccccCC----CCchhhhhhhhhHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCCCcccCCCCCCCccc
Q 039049           80 TASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKK----AKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDY  151 (305)
Q Consensus        80 ~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~  151 (305)
                      |||......    ..+.++..+++|+.++..+.+++..    .+.-.++|++||.....+.+..                
T Consensus        86 NAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~----------------  149 (247)
T 4hp8_A           86 NAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRV----------------  149 (247)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSC----------------
T ss_pred             CCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCC----------------
Confidence            999876543    4667888999999999999987533    2124689999998754432221                


Q ss_pred             ccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHH
Q 039049          152 CKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDD  228 (305)
Q Consensus       152 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  228 (305)
                           ..|+.||.....+.+.++.++   |+++..+.||.+-.+........ ...........+      ..-+-.++|
T Consensus       150 -----~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~-~~~~~~~~~~~P------lgR~g~pee  217 (247)
T 4hp8_A          150 -----PSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRAD-AARNKAILERIP------AGRWGHSED  217 (247)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTS-HHHHHHHHTTCT------TSSCBCTHH
T ss_pred             -----hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccC-HHHHHHHHhCCC------CCCCcCHHH
Confidence                 669999999999999888775   89999999999977642110000 111222222222      334678899


Q ss_pred             HHHHHHHhhccccc---CceEEEecC
Q 039049          229 VVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       229 ~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      +|.++++++.....   +..+.+.|.
T Consensus       218 iA~~v~fLaSd~a~~iTG~~i~VDGG  243 (247)
T 4hp8_A          218 IAGAAVFLSSAAADYVHGAILNVDGG  243 (247)
T ss_dssp             HHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHhCchhcCCcCCeEEECcc
Confidence            99999999876443   445666554

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.87  E-value=7.8e-22  Score=161.96  Aligned_cols=213  Identities=14%  Similarity=0.055  Sum_probs=142.7

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEE-E--eCCCcccchhhhhhccCccCceEEEEccCCCcchHH-HHh---cC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTT-V--RDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFD-EAI---QG   73 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~-~--r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~-~~~---~~   73 (305)
                      ||+++||||+|+||+++++.|+++|++|+++ .  |+.+.......  ..    .+....  |..+.+.+. ++.   .+
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~--~~----~~~~~~--~~~~v~~~~~~~~~~~g~   72 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFES--EN----PGTIAL--AEQKPERLVDATLQHGEA   72 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHH--HS----TTEEEC--CCCCGGGHHHHHGGGSSC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHH--Hh----CCCccc--CHHHHHHHHHHHHHHcCC
Confidence            6889999999999999999999999999999 6  87643322111  11    122222  443433322 222   26


Q ss_pred             CCEEEEecccccc---CC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccC
Q 039049           74 VDGVFHTASPVLV---PY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLN  142 (305)
Q Consensus        74 ~d~Vi~~a~~~~~---~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  142 (305)
                      +|++|||||....   ..    ..+.+...+++|+.++.++++++.    +. +.++||++||...+.+.+..       
T Consensus        73 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~~~~~~-------  144 (244)
T 1zmo_A           73 IDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAA-GGASVIFITSSVGKKPLAYN-------  144 (244)
T ss_dssp             EEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCGGGTSCCTTC-------
T ss_pred             CCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECChhhCCCCCCc-------
Confidence            8999999997654   21    345677799999999999998875    33 56799999998765432111       


Q ss_pred             CCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCC---CCCCCchHHHHHHHHh-cCCCC
Q 039049          143 ESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLL---APQPTSTLLLILAMVK-GLRGE  215 (305)
Q Consensus       143 E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~---~~~~~~~~~~~~~~~~-~~~~~  215 (305)
                                    ..|+.||.+.+.+.+.++.+.   ++++++++|+.+..+..   ... . .......... ..+  
T Consensus       145 --------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~-~-~~~~~~~~~~~~~p--  206 (244)
T 1zmo_A          145 --------------PLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDW-E-NNPELRERVDRDVP--  206 (244)
T ss_dssp             --------------TTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHH-H-HCHHHHHHHHHHCT--
T ss_pred             --------------hHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccc-c-chHHHHHHHhcCCC--
Confidence                          569999999999999887764   89999999999977642   100 0 0011111111 111  


Q ss_pred             CCCCCccceeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          216 YPNTTVGFVHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       216 ~~~~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                          ...+..++|+|+++++++.....   +..+.+.|.
T Consensus       207 ----~~r~~~pe~vA~~v~~l~s~~~~~~tG~~i~vdgG  241 (244)
T 1zmo_A          207 ----LGRLGRPDEMGALITFLASRRAAPIVGQFFAFTGG  241 (244)
T ss_dssp             ----TCSCBCHHHHHHHHHHHHTTTTGGGTTCEEEESTT
T ss_pred             ----CCCCcCHHHHHHHHHHHcCccccCccCCEEEeCCC
Confidence                23478999999999999976432   344666543

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.86  E-value=2e-21  Score=161.02  Aligned_cols=210  Identities=14%  Similarity=0.066  Sum_probs=147.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHH---cCCeEEEEEeCCCcccchh-hhhhccCccCceEEEEccCCCcchHHHHhc-----
Q 039049            2 PEYCVTGGTGFIAAHLVKALLD---KGHMVRTTVRDPEDLSKVG-FLWELNGAEERLKIMKADLLMEGSFDEAIQ-----   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~---~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   72 (305)
                      |+++||||+|+||+++++.|++   .|++|++++|+.+...... .+... ....++.++++|+.|++++.++++     
T Consensus         7 k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   85 (259)
T 1oaa_A            7 AVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQ-QPDLKVVLAAADLGTEAGVQRLLSAVREL   85 (259)
T ss_dssp             EEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHH-CTTSEEEEEECCTTSHHHHHHHHHHHHHS
T ss_pred             cEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhh-CCCCeEEEEecCCCCHHHHHHHHHHHHhc
Confidence            6799999999999999999999   8999999999865433221 11111 012368899999999988877653     


Q ss_pred             ----CCC--EEEEecccccc--C-----CCCchhhhhhhhhHHHHHHHHHHHHhcC-----CccEEEEeccceeeeccCC
Q 039049           73 ----GVD--GVFHTASPVLV--P-----YDNNIQATLIDPCIKGTLNVLSSCKKAK-----SVKRVVLTSSCSSIRYRHD  134 (305)
Q Consensus        73 ----~~d--~Vi~~a~~~~~--~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~-----~~~~~v~~SS~~~~~~~~~  134 (305)
                          ++|  ++|||||....  .     ...+.+...+++|+.++.++++++...-     +..+||++||...+.+.+.
T Consensus        86 ~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  165 (259)
T 1oaa_A           86 PRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKG  165 (259)
T ss_dssp             CCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCTT
T ss_pred             cccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCCCCC
Confidence                358  99999997542  1     2345678899999999999999986531     2357999999876433211


Q ss_pred             CCCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc-CCcEEEEecCceecCCCCCCCC--chHHHHHHHHhc
Q 039049          135 AQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC-GIDMVVVNPSFVVGPLLAPQPT--STLLLILAMVKG  211 (305)
Q Consensus       135 ~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~i~Rp~~v~G~~~~~~~~--~~~~~~~~~~~~  211 (305)
                                     .      ..|+.||...+.+.+.++.+. ++++..++|+.+-.+.......  ............
T Consensus       166 ---------------~------~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  224 (259)
T 1oaa_A          166 ---------------W------GLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKL  224 (259)
T ss_dssp             ---------------C------HHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHH
T ss_pred             ---------------c------cHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchHHHHhhccCChhHHHHHHHh
Confidence                           1      679999999999999998876 4888999999876542100000  000000111111


Q ss_pred             CCCCCCCCCccceeHHHHHHHHHHhhcc
Q 039049          212 LRGEYPNTTVGFVHIDDVVGAHILAMEE  239 (305)
Q Consensus       212 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~  239 (305)
                      .+      ...+..++|+|++++++++.
T Consensus       225 ~p------~~~~~~p~dvA~~v~~l~~~  246 (259)
T 1oaa_A          225 KS------DGALVDCGTSAQKLLGLLQK  246 (259)
T ss_dssp             HH------TTCSBCHHHHHHHHHHHHHH
T ss_pred             hh------cCCcCCHHHHHHHHHHHHhh
Confidence            01      23478999999999999874

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.86  E-value=5.6e-21  Score=159.11  Aligned_cols=219  Identities=13%  Similarity=0.042  Sum_probs=151.5

Q ss_pred             CcEEEeCC--cchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            2 PEYCVTGG--TGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~--~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      |+++||||  +|+||+++++.|++.|++|++++|+.++..  ..+...  ...++.++++|+.|++++.++++       
T Consensus         8 k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~--~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   83 (269)
T 2h7i_A            8 KRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLI--QRITDR--LPAKAPLLELDVQNEEHLASLAGRVTEAIG   83 (269)
T ss_dssp             CEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHH--HHHHTT--SSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHH--HHHHHh--cCCCceEEEccCCCHHHHHHHHHHHHHHhC
Confidence            46999999  999999999999999999999999864311  111111  12367899999999998888775       


Q ss_pred             ---CCCEEEEecccccc---------CCCCchhhhhhhhhHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCCCc
Q 039049           73 ---GVDGVFHTASPVLV---------PYDNNIQATLIDPCIKGTLNVLSSCKKAK-SVKRVVLTSSCSSIRYRHDAQQVS  139 (305)
Q Consensus        73 ---~~d~Vi~~a~~~~~---------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~  139 (305)
                         ++|++|||||....         ....+.+...+++|+.++.++++++...- ...+||++||...++ .+.     
T Consensus        84 ~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~-~~~-----  157 (269)
T 2h7i_A           84 AGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRA-MPA-----  157 (269)
T ss_dssp             TTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSC-CTT-----
T ss_pred             CCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccccc-cCc-----
Confidence               78999999997651         11345667789999999999999986541 125899999865311 110     


Q ss_pred             ccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCC----CCchH-----HHHHH
Q 039049          140 PLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQ----PTSTL-----LLILA  207 (305)
Q Consensus       140 ~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~----~~~~~-----~~~~~  207 (305)
                                      ...|+.||...+.+.+.++.++   +++++.++|+.+..+.....    .....     .....
T Consensus       158 ----------------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  221 (269)
T 2h7i_A          158 ----------------YNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEG  221 (269)
T ss_dssp             ----------------THHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHH
T ss_pred             ----------------hHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHh
Confidence                            1669999999999999888764   89999999999876521100    00000     00111


Q ss_pred             HHhcCCCCCCCCCccceeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          208 MVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       208 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      .....+  +   .+.+..++|+|+++++++.....   +..+.+.|.
T Consensus       222 ~~~~~p--~---~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  263 (269)
T 2h7i_A          222 WDQRAP--I---GWNMKDATPVAKTVCALLSDWLPATTGDIIYADGG  263 (269)
T ss_dssp             HHHHCT--T---CCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTT
T ss_pred             hhccCC--c---ccCCCCHHHHHHHHHHHhCchhccCcceEEEecCC
Confidence            111111  1   11477889999999999975432   334666543

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.86  E-value=1.2e-20  Score=169.80  Aligned_cols=226  Identities=19%  Similarity=0.141  Sum_probs=161.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhh-hhhccCccCceEEEEccCCCcchHHHHhcC--CCEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGF-LWELNGAEERLKIMKADLLMEGSFDEAIQG--VDGV   77 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~V   77 (305)
                      ++||||||+|+||.+++++|+++|+ +|++++|+......... ...+...+.++.++.+|+.|.+++.+++++  +|+|
T Consensus       260 ~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld~V  339 (511)
T 2z5l_A          260 GTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPPNAV  339 (511)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCcEE
Confidence            6899999999999999999999998 59999998643222211 122222345789999999999999999874  9999


Q ss_pred             EEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCccccc
Q 039049           78 FHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCK  153 (305)
Q Consensus        78 i~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~  153 (305)
                      ||+||......    ..+.....+++|+.++.++.+.+....+.++||++||...+.+....                  
T Consensus       340 Vh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~g~------------------  401 (511)
T 2z5l_A          340 FHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNAGQ------------------  401 (511)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCTTB------------------
T ss_pred             EECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCCCC------------------
Confidence            99999876432    34456778899999999999988654356799999998654432211                  


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHH
Q 039049          154 HYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAH  233 (305)
Q Consensus       154 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~  233 (305)
                         ..|+.+|...|.+.+.+ +..|+++++++|+.+-+.+...  ....   ..+...        ...+++.+|+++++
T Consensus       402 ---~~YaaaKa~ld~la~~~-~~~gi~v~sv~pG~~~~tgm~~--~~~~---~~~~~~--------g~~~l~~e~~a~~l  464 (511)
T 2z5l_A          402 ---GAYAAANAALDALAERR-RAAGLPATSVAWGLWGGGGMAA--GAGE---ESLSRR--------GLRAMDPDAAVDAL  464 (511)
T ss_dssp             ---HHHHHHHHHHHHHHHHH-HTTTCCCEEEEECCBCSTTCCC--CHHH---HHHHHH--------TBCCBCHHHHHHHH
T ss_pred             ---HHHHHHHHHHHHHHHHH-HHcCCcEEEEECCcccCCcccc--cccH---HHHHhc--------CCCCCCHHHHHHHH
Confidence               67999999999998766 4669999999999874322111  1111   111111        23479999999999


Q ss_pred             HHhhcccccCceEEEecCCcCHHHHHHHHHHhC
Q 039049          234 ILAMEETRASGRLICSSSVAHWSPIIEMLKATY  266 (305)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~  266 (305)
                      ..++..+..  .+.+.  .+.+..+...+....
T Consensus       465 ~~al~~~~~--~v~v~--~~d~~~~~~~~~~~~  493 (511)
T 2z5l_A          465 LGAMGRNDV--CVTVV--DVDWERFAPATNAIR  493 (511)
T ss_dssp             HHHHHHTCS--EEEEC--CBCHHHHHHHHHHHS
T ss_pred             HHHHhCCCC--EEEEE--eCCHHHHHhhhcccC
Confidence            999987543  22222  345777776665443

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.86  E-value=9.2e-20  Score=150.42  Aligned_cols=221  Identities=14%  Similarity=0.053  Sum_probs=157.8

Q ss_pred             CcEEEeCCcc--hHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            2 PEYCVTGGTG--FIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~~G--~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      |+++||||+|  .||+++++.|++.|++|++..|+.+...+........ ...++.++++|++|++++.++++       
T Consensus         7 K~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   85 (256)
T 4fs3_A            7 KTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQL-NQPEAHLYQIDVQSDEEVINGFEQIGKDVG   85 (256)
T ss_dssp             CEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGG-TCSSCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            6899999887  8999999999999999999999876544433322211 13468899999999988877764       


Q ss_pred             CCCEEEEeccccccC--------CCCchhhhhhhhhHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCCCcccCC
Q 039049           73 GVDGVFHTASPVLVP--------YDNNIQATLIDPCIKGTLNVLSSCKKAK-SVKRVVLTSSCSSIRYRHDAQQVSPLNE  143 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~E  143 (305)
                      ++|++|||||.....        .+.+.+...+++|+.++..+.+.+.... .-.++|++||.....+.+..        
T Consensus        86 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~~~--------  157 (256)
T 4fs3_A           86 NIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNY--------  157 (256)
T ss_dssp             CCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCTTT--------
T ss_pred             CCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCcccc--------
Confidence            689999999975432        1233455667889999988888775541 23589999997754332211        


Q ss_pred             CCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCC
Q 039049          144 SHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTT  220 (305)
Q Consensus       144 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (305)
                                   ..|+.||...+.+.+.++.++   |+++..+.||.+-.+..... ..............+      .
T Consensus       158 -------------~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~-~~~~~~~~~~~~~~P------l  217 (256)
T 4fs3_A          158 -------------NVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGV-GGFNTILKEIKERAP------L  217 (256)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTC-TTHHHHHHHHHHHST------T
T ss_pred             -------------hhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhc-cCCHHHHHHHHhcCC------C
Confidence                         669999999999998888764   89999999999887654332 222233334333333      2


Q ss_pred             ccceeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          221 VGFVHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       221 ~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      .-+..++|+|.++++++.....   +..+.+.|.
T Consensus       218 ~R~g~peevA~~v~fL~Sd~a~~iTG~~i~VDGG  251 (256)
T 4fs3_A          218 KRNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSG  251 (256)
T ss_dssp             SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCcCHHHHHHHHHHHhCchhcCccCCEEEECcC
Confidence            3467899999999999975432   445666544

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.86  E-value=2.3e-20  Score=165.79  Aligned_cols=215  Identities=16%  Similarity=0.059  Sum_probs=152.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C-
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G-   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~-   73 (305)
                      ++++||||+|.||+++++.|+++|++|++++|+..... .......    .++.++++|+.|.+++.++++       + 
T Consensus       214 k~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~-l~~~~~~----~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~  288 (454)
T 3u0b_A          214 KVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAED-LKRVADK----VGGTALTLDVTADDAVDKITAHVTEHHGGK  288 (454)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHH-HHHHHHH----HTCEEEECCTTSTTHHHHHHHHHHHHSTTC
T ss_pred             CEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHH-HHHHHHH----cCCeEEEEecCCHHHHHHHHHHHHHHcCCC
Confidence            67999999999999999999999999999998753221 1111111    146789999999998888764       3 


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      +|+||||||......    ..+.+...+++|+.++.++.+++...   .+..+||++||...+.+....           
T Consensus       289 id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~-----------  357 (454)
T 3u0b_A          289 VDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQ-----------  357 (454)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTC-----------
T ss_pred             ceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCC-----------
Confidence            899999999876542    45567788999999999999998754   134699999998765543221           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                                ..|+.+|...+.+.+.++.+   .|++++++.|+.+..+..........   .......+      ...+
T Consensus       358 ----------~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~---~~~~~~~~------l~r~  418 (454)
T 3u0b_A          358 ----------TNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATR---EVGRRLNS------LFQG  418 (454)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------C---HHHHHSBT------TSSC
T ss_pred             ----------HHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhH---HHHHhhcc------ccCC
Confidence                      67999999999888887765   48999999999998775322110000   00111111      2345


Q ss_pred             eeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          224 VHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      ...+|+|+++.+++....   .+..+++.|.
T Consensus       419 g~pedvA~~v~fL~s~~a~~itG~~i~vdGG  449 (454)
T 3u0b_A          419 GQPVDVAELIAYFASPASNAVTGNTIRVCGQ  449 (454)
T ss_dssp             BCHHHHHHHHHHHHCGGGTTCCSCEEEESSS
T ss_pred             CCHHHHHHHHHHHhCCccCCCCCcEEEECCc
Confidence            789999999999987543   2445777554

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.85  E-value=7.1e-20  Score=150.74  Aligned_cols=211  Identities=16%  Similarity=0.118  Sum_probs=150.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||++.||+++++.|++.|++|++..|+.....            ....++++|+.|++++.++++       ++
T Consensus        12 K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~------------~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   79 (261)
T 4h15_A           12 KRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGL------------PEELFVEADLTTKEGCAIVAEATRQRLGGV   79 (261)
T ss_dssp             CEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTS------------CTTTEEECCTTSHHHHHHHHHHHHHHTSSC
T ss_pred             CEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhCC------------CcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999754221            133478899999988877664       68


Q ss_pred             CEEEEeccccccC------CCCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCC
Q 039049           75 DGVFHTASPVLVP------YDNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNES  144 (305)
Q Consensus        75 d~Vi~~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~  144 (305)
                      |++|||||.....      .+.+.+...+++|+.++..+.+++.    +. +-.++|++||.....+.+..         
T Consensus        80 DilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~~G~Iv~isS~~~~~~~~~~---------  149 (261)
T 4h15_A           80 DVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVAR-GSGVVVHVTSIQRVLPLPES---------  149 (261)
T ss_dssp             SEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCTTT---------
T ss_pred             CEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhc-CCceEEEEEehhhccCCCCc---------
Confidence            9999999965432      1456778899999999999888764    33 55689999997654332110         


Q ss_pred             CCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCC---------CC--chHHHHHHHHh
Q 039049          145 HWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQ---------PT--STLLLILAMVK  210 (305)
Q Consensus       145 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~---------~~--~~~~~~~~~~~  210 (305)
                                 ...|+.||...+.+.+.++.++   |+++..+.||.+-.+.....         ..  .....+.....
T Consensus       150 -----------~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (261)
T 4h15_A          150 -----------TTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLG  218 (261)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTT
T ss_pred             -----------cHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhc
Confidence                       0669999999999998888774   89999999999876531100         00  00001111111


Q ss_pred             cCCCCCCCCCccceeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          211 GLRGEYPNTTVGFVHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       211 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      .  ..    ..-+..++|+|.++++++.....   +..+.+.|.
T Consensus       219 ~--~P----lgR~g~peevA~~v~fLaS~~a~~itG~~i~VDGG  256 (261)
T 4h15_A          219 G--IP----LGRPAKPEEVANLIAFLASDRAASITGAEYTIDGG  256 (261)
T ss_dssp             C--CT----TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             C--CC----CCCCcCHHHHHHHHHHHhCchhcCccCcEEEECCc
Confidence            1  11    34478899999999999975432   445777654

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.84  E-value=3.3e-20  Score=157.86  Aligned_cols=202  Identities=17%  Similarity=0.135  Sum_probs=140.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeC---------CCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRD---------PEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~---------~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~   72 (305)
                      |+++||||+|+||+++++.|+++|++|++.+|.         .......  ...+....   ....+|+.+.+++.++++
T Consensus        10 k~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~--~~~l~~~~---~~~~~D~~~~~~~~~~~~   84 (319)
T 1gz6_A           10 RVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKV--VEEIRRRG---GKAVANYDSVEAGEKLVK   84 (319)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHH--HHHHHHTT---CEEEEECCCGGGHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHH--HHHHHhhC---CeEEEeCCCHHHHHHHHH
Confidence            679999999999999999999999999997653         2211111  11111111   123579999887666543


Q ss_pred             -------CCCEEEEeccccccC----CCCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCC
Q 039049           73 -------GVDGVFHTASPVLVP----YDNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQ  137 (305)
Q Consensus        73 -------~~d~Vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~  137 (305)
                             ++|++|||||.....    ...+.+...+++|+.++.++.+++    ++. +..+||++||.....+...   
T Consensus        85 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~grIV~vsS~~~~~~~~~---  160 (319)
T 1gz6_A           85 TALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ-NYGRIIMTASASGIYGNFG---  160 (319)
T ss_dssp             HHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHHCCTT---
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEECChhhccCCCC---
Confidence                   689999999986543    144567789999999999998887    334 5679999999765443211   


Q ss_pred             CcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCC
Q 039049          138 VSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRG  214 (305)
Q Consensus       138 ~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  214 (305)
                                  .      ..|+.||...+.+.+.++.+.   ++++++++|+.+ .+......                
T Consensus       161 ------------~------~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~----------------  205 (319)
T 1gz6_A          161 ------------Q------ANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVM----------------  205 (319)
T ss_dssp             ------------C------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGS----------------
T ss_pred             ------------C------HHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccC----------------
Confidence                        1      679999999999999888774   899999999986 32211000                


Q ss_pred             CCCCCCccceeHHHHHHHHHHhhcccc--cCceEEEe
Q 039049          215 EYPNTTVGFVHIDDVVGAHILAMEETR--ASGRLICS  249 (305)
Q Consensus       215 ~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~~~~  249 (305)
                        +.....++.++|+|.++++++..+.  .+..|++.
T Consensus       206 --~~~~~~~~~p~dvA~~~~~l~s~~~~~tG~~~~v~  240 (319)
T 1gz6_A          206 --PEDLVEALKPEYVAPLVLWLCHESCEENGGLFEVG  240 (319)
T ss_dssp             --CHHHHHHSCGGGTHHHHHHHTSTTCCCCSCEEEEE
T ss_pred             --ChhhhccCCHHHHHHHHHHHhCchhhcCCCEEEEC
Confidence              0012235789999999999987642  23445553

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.84  E-value=9.2e-22  Score=168.18  Aligned_cols=173  Identities=13%  Similarity=0.090  Sum_probs=125.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-------eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-------MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~   74 (305)
                      |||+||||+||||++++..|++.|+       +|+++++.+...........+.+.  .+.++ +|+.+.+.+.++++++
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~--~~~~~-~di~~~~~~~~a~~~~   81 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC--AFPLL-AGLEATDDPKVAFKDA   81 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT--TCTTE-EEEEEESCHHHHTTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcc--ccccc-CCeEeccChHHHhCCC
Confidence            5899999999999999999999886       899987753100000000111111  12233 5777777788889999


Q ss_pred             CEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCC-cc-EEEEeccceeeeccCCCCCCcccC-CCC-CCCcc
Q 039049           75 DGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKS-VK-RVVLTSSCSSIRYRHDAQQVSPLN-ESH-WSDPD  150 (305)
Q Consensus        75 d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~-~~v~~SS~~~~~~~~~~~~~~~~~-E~~-~~~~~  150 (305)
                      |+|||+||.....  .....++++.|+.++.++++++++. + .+ +|+++|+.....        .+.. |.. ...|.
T Consensus        82 D~Vih~Ag~~~~~--~~~~~~~~~~Nv~~t~~l~~a~~~~-~~~~~~vvv~snp~~~~--------~~~~~~~~~~~~p~  150 (327)
T 1y7t_A           82 DYALLVGAAPRKA--GMERRDLLQVNGKIFTEQGRALAEV-AKKDVKVLVVGNPANTN--------ALIAYKNAPGLNPR  150 (327)
T ss_dssp             SEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHH-SCTTCEEEECSSSHHHH--------HHHHHHTCTTSCGG
T ss_pred             CEEEECCCcCCCC--CCCHHHHHHHHHHHHHHHHHHHHhh-cCCCeEEEEeCCchhhh--------HHHHHHHcCCCChh
Confidence            9999999987643  2445668999999999999999998 4 44 788877643100        1221 222 12233


Q ss_pred             cccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCC
Q 039049          151 YCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLL  194 (305)
Q Consensus       151 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~  194 (305)
                            +.|+.+|+.+|++...+++.++++.+++|+++|||++.
T Consensus       151 ------~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~  188 (327)
T 1y7t_A          151 ------NFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHS  188 (327)
T ss_dssp             ------GEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSS
T ss_pred             ------heeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCC
Confidence                  66999999999999999988999999999999999875

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.84  E-value=7.6e-19  Score=148.35  Aligned_cols=223  Identities=13%  Similarity=0.009  Sum_probs=145.1

Q ss_pred             CcEEEeCCc--chHHHHHHHHHHHcCCeEEEEEeCCCc--------ccchhhhhhccCcc--CceEEEEcc--------C
Q 039049            2 PEYCVTGGT--GFIAAHLVKALLDKGHMVRTTVRDPED--------LSKVGFLWELNGAE--ERLKIMKAD--------L   61 (305)
Q Consensus         2 ~~ilItG~~--G~iG~~l~~~l~~~g~~V~~~~r~~~~--------~~~~~~~~~~~~~~--~~~~~~~~D--------~   61 (305)
                      |+++||||+  |+||+++++.|++.|++|++++|++..        ..............  .....+.+|        +
T Consensus         9 k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv   88 (297)
T 1d7o_A            9 KRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPEDV   88 (297)
T ss_dssp             CEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSGGGS
T ss_pred             CEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccchhhh
Confidence            679999999  999999999999999999999865210        00111111111000  012333333        2


Q ss_pred             C----C--------cchHHHHhc-------CCCEEEEeccccc--c----CCCCchhhhhhhhhHHHHHHHHHHHHhcC-
Q 039049           62 L----M--------EGSFDEAIQ-------GVDGVFHTASPVL--V----PYDNNIQATLIDPCIKGTLNVLSSCKKAK-  115 (305)
Q Consensus        62 ~----d--------~~~~~~~~~-------~~d~Vi~~a~~~~--~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-  115 (305)
                      .    |        .+++.++++       ++|++|||||...  .    ....+.+...+++|+.++.++++++...- 
T Consensus        89 ~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~  168 (297)
T 1d7o_A           89 PEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMN  168 (297)
T ss_dssp             CHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE
T ss_pred             hhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence            2    2        445555543       6899999998642  1    12455677899999999999999987641 


Q ss_pred             CccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH----cCCcEEEEecCceec
Q 039049          116 SVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD----CGIDMVVVNPSFVVG  191 (305)
Q Consensus       116 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~i~Rp~~v~G  191 (305)
                      ...++|++||...+.+.+..              .      ..|+.||...+.+.+.++.+    ++++++.++|+.+.+
T Consensus       169 ~~g~iv~isS~~~~~~~~~~--------------~------~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T  228 (297)
T 1d7o_A          169 PGGASISLTYIASERIIPGY--------------G------GGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGS  228 (297)
T ss_dssp             EEEEEEEEECGGGTSCCTTC--------------T------TTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBC
T ss_pred             cCceEEEEeccccccCCCCc--------------c------hHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEecccccc
Confidence            12589999997654322110              0      35999999999998888765    589999999999999


Q ss_pred             CCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          192 PLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      +..... .....+........+      ...+..++|+|+++++++....   .+..+++.+.
T Consensus       229 ~~~~~~-~~~~~~~~~~~~~~p------~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG  284 (297)
T 1d7o_A          229 RAAKAI-GFIDTMIEYSYNNAP------IQKTLTADEVGNAAAFLVSPLASAITGATIYVDNG  284 (297)
T ss_dssp             CCSSCC-SHHHHHHHHHHHHSS------SCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             chhhhc-cccHHHHHHhhccCC------CCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            864331 111222222222222      2346789999999999987533   2445777654

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.83  E-value=1.6e-19  Score=161.33  Aligned_cols=206  Identities=19%  Similarity=0.149  Sum_probs=152.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhhh-hhccCccCceEEEEccCCCcchHHHHhc------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGFL-WELNGAEERLKIMKADLLMEGSFDEAIQ------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~D~~d~~~~~~~~~------~   73 (305)
                      +++|||||+|.||.++++.|+++|+ +|++++|+..+......+ ..+...+.++.++.+|+.|.+++.++++      .
T Consensus       240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g~  319 (496)
T 3mje_A          240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDAP  319 (496)
T ss_dssp             SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTSC
T ss_pred             CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhCC
Confidence            6899999999999999999999998 788888875433322222 2222234578999999999999999886      4


Q ss_pred             CCEEEEecccc-ccCC----CCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCC
Q 039049           74 VDGVFHTASPV-LVPY----DNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSD  148 (305)
Q Consensus        74 ~d~Vi~~a~~~-~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~  148 (305)
                      +|+|||+||.. ....    ..+.....+++|+.++.++.+.+... ...+||++||...+.+....             
T Consensus       320 ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~-~~~~iV~~SS~a~~~g~~g~-------------  385 (496)
T 3mje_A          320 LTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL-DLDAFVLFSSGAAVWGSGGQ-------------  385 (496)
T ss_dssp             EEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS-CCSEEEEEEEHHHHTTCTTC-------------
T ss_pred             CeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc-CCCEEEEEeChHhcCCCCCc-------------
Confidence            79999999987 3221    34566788999999999999999887 77899999998765543221             


Q ss_pred             cccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHH
Q 039049          149 PDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDD  228 (305)
Q Consensus       149 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  228 (305)
                              ..|+.+|...+.+.+.+ +..|++++++.|+.+.+.+......    ....+...        ....+..++
T Consensus       386 --------~~YaAaKa~ldala~~~-~~~Gi~v~sV~pG~w~~~gm~~~~~----~~~~l~~~--------g~~~l~pe~  444 (496)
T 3mje_A          386 --------PGYAAANAYLDALAEHR-RSLGLTASSVAWGTWGEVGMATDPE----VHDRLVRQ--------GVLAMEPEH  444 (496)
T ss_dssp             --------HHHHHHHHHHHHHHHHH-HHTTCCCEEEEECEESSSCC----------CHHHHHT--------TEEEECHHH
T ss_pred             --------HHHHHHHHHHHHHHHHH-HhcCCeEEEEECCcccCCccccChH----HHHHHHhc--------CCCCCCHHH
Confidence                    66999999999888765 4679999999999987765322110    11111111        233578999


Q ss_pred             HHHHHHHhhccccc
Q 039049          229 VVGAHILAMEETRA  242 (305)
Q Consensus       229 ~a~~~~~~~~~~~~  242 (305)
                      .+.++..++..+..
T Consensus       445 ~~~~l~~~l~~~~~  458 (496)
T 3mje_A          445 ALGALDQMLENDDT  458 (496)
T ss_dssp             HHHHHHHHHHHTCS
T ss_pred             HHHHHHHHHcCCCc
Confidence            99999999987543

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.79  E-value=9.9e-19  Score=157.90  Aligned_cols=225  Identities=16%  Similarity=0.093  Sum_probs=155.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCe-EEEE-EeCCCc----------ccchh-hhhhccCccCceEEEEccCCCcchHH
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHM-VRTT-VRDPED----------LSKVG-FLWELNGAEERLKIMKADLLMEGSFD   68 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~-V~~~-~r~~~~----------~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~   68 (305)
                      +++|||||+|.||.++++.|+++|.+ |+++ +|+...          ..... ....+...+.++.++.+|+.|.+++.
T Consensus       252 ~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~  331 (525)
T 3qp9_A          252 GTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEAAA  331 (525)
T ss_dssp             SEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHHHH
T ss_pred             CEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHHHH
Confidence            57999999999999999999999987 5555 787532          11111 11122222457899999999999999


Q ss_pred             HHhcC------CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhcCC-----ccEEEEeccceeeeccC
Q 039049           69 EAIQG------VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKAKS-----VKRVVLTSSCSSIRYRH  133 (305)
Q Consensus        69 ~~~~~------~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~-----~~~~v~~SS~~~~~~~~  133 (305)
                      ++++.      +|.||||||......    ..+.....+++|+.++.++.+.+... .     ..+||++||...+.+..
T Consensus       332 ~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~-~~~~~~~~~iV~~SS~a~~~g~~  410 (525)
T 3qp9_A          332 RLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREA-AAAGGRPPVLVLFSSVAAIWGGA  410 (525)
T ss_dssp             HHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHT-C----CCCEEEEEEEGGGTTCCT
T ss_pred             HHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccc-cccCCCCCEEEEECCHHHcCCCC
Confidence            98864      699999999876532    34567778999999999999998876 4     67999999987655432


Q ss_pred             CCCCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCC
Q 039049          134 DAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLR  213 (305)
Q Consensus       134 ~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~  213 (305)
                      ..                     ..|+.+|...+.+...+ ...|++++++.|+.+-++.. .  ...  ....+...  
T Consensus       411 g~---------------------~~YaaaKa~l~~lA~~~-~~~gi~v~sI~pG~~~tgm~-~--~~~--~~~~~~~~--  461 (525)
T 3qp9_A          411 GQ---------------------GAYAAGTAFLDALAGQH-RADGPTVTSVAWSPWEGSRV-T--EGA--TGERLRRL--  461 (525)
T ss_dssp             TC---------------------HHHHHHHHHHHHHHTSC-CSSCCEEEEEEECCBTTSGG-G--SSH--HHHHHHHT--
T ss_pred             CC---------------------HHHHHHHHHHHHHHHHH-HhCCCCEEEEECCccccccc-c--chh--hHHHHHhc--
Confidence            21                     66999999999876544 34589999999999822211 0  111  11111111  


Q ss_pred             CCCCCCCccceeHHHHHHHHHHhhcccccCceEEEecCCcCHHHHHHHHHHhC
Q 039049          214 GEYPNTTVGFVHIDDVVGAHILAMEETRASGRLICSSSVAHWSPIIEMLKATY  266 (305)
Q Consensus       214 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~  266 (305)
                            ....+..+++++++..++..+..  ...+  ..+.+..+...+....
T Consensus       462 ------g~~~l~pee~a~~l~~~l~~~~~--~v~v--~~~dw~~~~~~~~~~~  504 (525)
T 3qp9_A          462 ------GLRPLAPATALTALDTALGHGDT--AVTI--ADVDWSSFAPGFTTAR  504 (525)
T ss_dssp             ------TBCCBCHHHHHHHHHHHHHHTCS--EEEE--CCBCHHHHHHHHHSSS
T ss_pred             ------CCCCCCHHHHHHHHHHHHhCCCC--eEEE--EeCCHHHHHhhccccC
Confidence                  12358899999999999987533  1111  2345666666655443

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.77  E-value=3.4e-17  Score=139.34  Aligned_cols=224  Identities=14%  Similarity=0.024  Sum_probs=141.0

Q ss_pred             CcEEEeCC--cchHHHHHHHHHHHcCCeEEEEEeCCC--------cccchhhhhhccCcc--CceEEEEccC--------
Q 039049            2 PEYCVTGG--TGFIAAHLVKALLDKGHMVRTTVRDPE--------DLSKVGFLWELNGAE--ERLKIMKADL--------   61 (305)
Q Consensus         2 ~~ilItG~--~G~iG~~l~~~l~~~g~~V~~~~r~~~--------~~~~~~~~~~~~~~~--~~~~~~~~D~--------   61 (305)
                      |+++||||  +|+||+++++.|++.|++|+++.|++.        ...............  ..+.++.+|+        
T Consensus        10 k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~   89 (315)
T 2o2s_A           10 QTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKPEDV   89 (315)
T ss_dssp             CEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSSTTSS
T ss_pred             CEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccccchh
Confidence            57999999  899999999999999999999987531        000111111111000  0124444443        


Q ss_pred             ----C--------CcchHHHHhc-------CCCEEEEeccccc--c----CCCCchhhhhhhhhHHHHHHHHHHHHhcC-
Q 039049           62 ----L--------MEGSFDEAIQ-------GVDGVFHTASPVL--V----PYDNNIQATLIDPCIKGTLNVLSSCKKAK-  115 (305)
Q Consensus        62 ----~--------d~~~~~~~~~-------~~d~Vi~~a~~~~--~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-  115 (305)
                          .        |.+++.++++       ++|++|||||...  .    ....+.+...+++|+.++.++++++...- 
T Consensus        90 ~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~  169 (315)
T 2o2s_A           90 PQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMN  169 (315)
T ss_dssp             CHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEE
T ss_pred             hhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHh
Confidence                2        2445555543       6899999999652  1    12445677889999999999999986531 


Q ss_pred             CccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH----cCCcEEEEecCceec
Q 039049          116 SVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD----CGIDMVVVNPSFVVG  191 (305)
Q Consensus       116 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~i~Rp~~v~G  191 (305)
                      ...+||++||...+.+.+..              .      ..|+.||...+.+.+.++.+    ++++++.++||.+..
T Consensus       170 ~~g~Iv~isS~~~~~~~~~~--------------~------~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T  229 (315)
T 2o2s_A          170 EGGSAVTLSYLAAERVVPGY--------------G------GGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKS  229 (315)
T ss_dssp             EEEEEEEEEEGGGTSCCTTC--------------C------TTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCC
T ss_pred             cCCEEEEEecccccccCCCc--------------c------HHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccc
Confidence            12589999998654321110              0      25999999999998887755    589999999999876


Q ss_pred             CCCCCC----CCch-HHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          192 PLLAPQ----PTST-LLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       192 ~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      +.....    .... ...........+      ...+..++|+|+++++++.....   +..+.+.|.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  291 (315)
T 2o2s_A          230 RAASAIGKSGEKSFIDYAIDYSYNNAP------LRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNG  291 (315)
T ss_dssp             HHHHHTTCSSSSCHHHHHHHHHHHHSS------SCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             hhhhhccccccchhHHHHHHHHhccCC------CCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCC
Confidence            531100    0000 111111111111      23367899999999999975332   334666554

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.77  E-value=8.1e-18  Score=143.98  Aligned_cols=172  Identities=8%  Similarity=-0.002  Sum_probs=122.3

Q ss_pred             CCcEEEeCCcc--hHHHHHHHHHHHcCCeEEEEEeCC---------Ccccchhhhhhc-cCccCceEEEEccCCCc--c-
Q 039049            1 MPEYCVTGGTG--FIAAHLVKALLDKGHMVRTTVRDP---------EDLSKVGFLWEL-NGAEERLKIMKADLLME--G-   65 (305)
Q Consensus         1 m~~ilItG~~G--~iG~~l~~~l~~~g~~V~~~~r~~---------~~~~~~~~~~~~-~~~~~~~~~~~~D~~d~--~-   65 (305)
                      .|+++||||++  .||+++++.|+++|++|++..|++         ++.......... ......+.++.+|+.+.  + 
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~   81 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence            36799999875  999999999999999999777654         111111111111 11123477888898876  6 


Q ss_pred             -----------------hHHHHhc-------CCCEEEEeccccc--cC----CCCchhhhhhhhhHHHHHHHHHHHHhcC
Q 039049           66 -----------------SFDEAIQ-------GVDGVFHTASPVL--VP----YDNNIQATLIDPCIKGTLNVLSSCKKAK  115 (305)
Q Consensus        66 -----------------~~~~~~~-------~~d~Vi~~a~~~~--~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~  115 (305)
                                       ++.++++       .+|++|||||...  ..    ...+.+...+++|+.++..+.+++...-
T Consensus        82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m  161 (329)
T 3lt0_A           82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence                             6666553       5899999999642  11    1455678899999999999999886541


Q ss_pred             -CccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccch-hHHHHHHHHHHHHHHHHHH----cCCcEEEEecCce
Q 039049          116 -SVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNL-WYAYAKTIAEKEAWRIAKD----CGIDMVVVNPSFV  189 (305)
Q Consensus       116 -~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~-~Y~~sK~~~E~~~~~~~~~----~~~~~~i~Rp~~v  189 (305)
                       .-.++|++||.....+.+..                     . .|+.||.+.+.+.+.++.+    .++++..+.||.+
T Consensus       162 ~~~g~Iv~isS~~~~~~~~~~---------------------~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v  220 (329)
T 3lt0_A          162 KPQSSIISLTYHASQKVVPGY---------------------GGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPL  220 (329)
T ss_dssp             EEEEEEEEEECGGGTSCCTTC---------------------TTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCC
T ss_pred             hhCCeEEEEeCccccCCCCcc---------------------hHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEeccee
Confidence             11589999998754332111                     3 5999999999988877654    5899999999998


Q ss_pred             ecCC
Q 039049          190 VGPL  193 (305)
Q Consensus       190 ~G~~  193 (305)
                      ..+.
T Consensus       221 ~T~~  224 (329)
T 3lt0_A          221 KSRA  224 (329)
T ss_dssp             CCHH
T ss_pred             echh
Confidence            7653

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.77  E-value=5.8e-18  Score=155.98  Aligned_cols=193  Identities=18%  Similarity=0.077  Sum_probs=133.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEe---------CCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVR---------DPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~   72 (305)
                      |+++||||+|.||+++++.|+++|++|++++|         +.........  ......   ....+|+.|.+++.++++
T Consensus        20 k~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~--~i~~~~---~~~~~D~~d~~~~~~~~~   94 (613)
T 3oml_A           20 RVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVD--EIRKAG---GEAVADYNSVIDGAKVIE   94 (613)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHH--HHHHTT---CCEEECCCCGGGHHHHHC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHH--HHHHhC---CeEEEEeCCHHHHHHHHH
Confidence            67999999999999999999999999999987         2222221111  111111   123479999888887775


Q ss_pred             -------CCCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCC
Q 039049           73 -------GVDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQ  137 (305)
Q Consensus        73 -------~~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~  137 (305)
                             .+|++|||||......    ..+.+...+++|+.++.++.+++    ++. +..+||++||...+.+....  
T Consensus        95 ~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~-~~g~IV~isS~a~~~~~~~~--  171 (613)
T 3oml_A           95 TAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQ-NYGRIIMTSSNSGIYGNFGQ--  171 (613)
T ss_dssp             ----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TCEEEEEECCHHHHHCCTTC--
T ss_pred             HHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEECCHHHcCCCCCC--
Confidence                   5799999999876532    45677889999999999999988    444 55799999998765443221  


Q ss_pred             CcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCC
Q 039049          138 VSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRG  214 (305)
Q Consensus       138 ~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  214 (305)
                                         ..|+.||.+.+.+.+.++.+.   ++++..+.|+.+- +......                
T Consensus       172 -------------------~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t-~~~~~~~----------------  215 (613)
T 3oml_A          172 -------------------VNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAAS-RMTEGIL----------------  215 (613)
T ss_dssp             -------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCC----------------
T ss_pred             -------------------hHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCC-hhhhhcc----------------
Confidence                               669999999999999888774   8999999998642 1111100                


Q ss_pred             CCCCCCccceeHHHHHHHHHHhhccc
Q 039049          215 EYPNTTVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       215 ~~~~~~~~~i~v~D~a~~~~~~~~~~  240 (305)
                        +......+..+|+|.++++++...
T Consensus       216 --~~~~~~~~~pedvA~~v~~L~s~~  239 (613)
T 3oml_A          216 --PDILFNELKPKLIAPVVAYLCHES  239 (613)
T ss_dssp             --CHHHHTTCCGGGTHHHHHHTTSTT
T ss_pred             --chhhhhcCCHHHHHHHHHHhcCCC
Confidence              001233468899999999998765

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.74  E-value=3.8e-17  Score=139.31  Aligned_cols=228  Identities=13%  Similarity=0.024  Sum_probs=123.9

Q ss_pred             CcEEEeCC--cchHHHHHHHHHHHcCCeEEEEEeCC-----------Ccccchhhh---------hhccCcc---CceEE
Q 039049            2 PEYCVTGG--TGFIAAHLVKALLDKGHMVRTTVRDP-----------EDLSKVGFL---------WELNGAE---ERLKI   56 (305)
Q Consensus         2 ~~ilItG~--~G~iG~~l~~~l~~~g~~V~~~~r~~-----------~~~~~~~~~---------~~~~~~~---~~~~~   56 (305)
                      |+++||||  +|+||+++++.|++.|++|++++|++           ........+         ..+....   ....+
T Consensus        10 k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (319)
T 2ptg_A           10 KTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVFDKI   89 (319)
T ss_dssp             CEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CCSEE
T ss_pred             CEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccccccc
Confidence            46999999  89999999999999999999998642           111110000         0000000   01244


Q ss_pred             EEccC------------CC--------cchHHHHhc-------CCCEEEEeccccc--c----CCCCchhhhhhhhhHHH
Q 039049           57 MKADL------------LM--------EGSFDEAIQ-------GVDGVFHTASPVL--V----PYDNNIQATLIDPCIKG  103 (305)
Q Consensus        57 ~~~D~------------~d--------~~~~~~~~~-------~~d~Vi~~a~~~~--~----~~~~~~~~~~~~~n~~~  103 (305)
                      +.+|+            .|        .+++.++++       ++|++|||||...  .    ....+.+...+++|+.+
T Consensus        90 ~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g  169 (319)
T 2ptg_A           90 YPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYS  169 (319)
T ss_dssp             EECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTHH
T ss_pred             ccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhHH
Confidence            44442            22        335555543       6899999999652  1    12455677889999999


Q ss_pred             HHHHHHHHHhcC-CccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH----cC
Q 039049          104 TLNVLSSCKKAK-SVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD----CG  178 (305)
Q Consensus       104 ~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~  178 (305)
                      +.++++++...- .-.+||++||...+.+.+..              .      ..|+.||...+.+.+.++.+    ++
T Consensus       170 ~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~--------------~------~~Y~asKaal~~l~~~la~el~~~~g  229 (319)
T 2ptg_A          170 FVSLLQHFLPLMKEGGSALALSYIASEKVIPGY--------------G------GGMSSAKAALESDCRTLAFEAGRARA  229 (319)
T ss_dssp             HHHHHHHHGGGEEEEEEEEEEEECC--------------------------------------THHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHhcCceEEEEeccccccccCcc--------------c------hhhHHHHHHHHHHHHHHHHHhccccC
Confidence            999999986541 12589999998754332110              0      35999999999998887755    58


Q ss_pred             CcEEEEecCceecCCCCCCCCc-hHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          179 IDMVVVNPSFVVGPLLAPQPTS-TLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       179 ~~~~i~Rp~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      ++++.++|+.+..+........ ...+.......  ..-......+..++|+|+++++++....   .+..+.+.|.
T Consensus       230 Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~--~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG  304 (319)
T 2ptg_A          230 VRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDY--SEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNG  304 (319)
T ss_dssp             CEEEEEEECCCC---------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             eeEEEEeeCCccChhhhhcccccchhhHHHHHHH--HhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCC
Confidence            9999999999987643211000 00000000000  0000012346789999999999997533   2345666544

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.65  E-value=2.7e-15  Score=149.09  Aligned_cols=205  Identities=12%  Similarity=0.085  Sum_probs=141.2

Q ss_pred             CcEEEeCCcch-HHHHHHHHHHHcCCeEEEEE-eCCCcccch-hhhh-hccCccCceEEEEccCCCcchHHHHhc-----
Q 039049            2 PEYCVTGGTGF-IAAHLVKALLDKGHMVRTTV-RDPEDLSKV-GFLW-ELNGAEERLKIMKADLLMEGSFDEAIQ-----   72 (305)
Q Consensus         2 ~~ilItG~~G~-iG~~l~~~l~~~g~~V~~~~-r~~~~~~~~-~~~~-~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   72 (305)
                      ++++||||+|. ||+++++.|++.|++|+++. |+....... ..+. .......++.++.+|+.|.+++.++++     
T Consensus       676 KvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~~~  755 (1887)
T 2uv8_A          676 KYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDT  755 (1887)
T ss_dssp             CEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHHHHh
Confidence            57999999999 99999999999999999985 554332221 1121 111223468899999999988887653     


Q ss_pred             --------CCCEEEEeccccccC-C----C--CchhhhhhhhhHHHHHHHHHHHHhcC-----CccEEEEeccceeeecc
Q 039049           73 --------GVDGVFHTASPVLVP-Y----D--NNIQATLIDPCIKGTLNVLSSCKKAK-----SVKRVVLTSSCSSIRYR  132 (305)
Q Consensus        73 --------~~d~Vi~~a~~~~~~-~----~--~~~~~~~~~~n~~~~~~l~~~~~~~~-----~~~~~v~~SS~~~~~~~  132 (305)
                              .+|++|||||..... .    .  .+.+...+++|+.++..+++.++...     +..+||++||.....+ 
T Consensus       756 ~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~~g-  834 (1887)
T 2uv8_A          756 EKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG-  834 (1887)
T ss_dssp             TTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTCSS-
T ss_pred             ccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhccC-
Confidence                    489999999986543 1    2  34567899999999999998874321     2358999999764322 


Q ss_pred             CCCCCCcccCCCCCCCcccccccchhHHHHHHHHHHH-HHHHHHHcC--CcEEEEecCceecCCCCCCCCchHHHHHHHH
Q 039049          133 HDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKE-AWRIAKDCG--IDMVVVNPSFVVGPLLAPQPTSTLLLILAMV  209 (305)
Q Consensus       133 ~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~-~~~~~~~~~--~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~  209 (305)
                       .               .      ..|+.||...+.+ .+.++++.+  ++++.+.||.+.+...........    ...
T Consensus       835 -g---------------~------~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~~~~~----~~~  888 (1887)
T 2uv8_A          835 -G---------------D------GMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIA----EGI  888 (1887)
T ss_dssp             -C---------------B------TTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----CCTTH----HHH
T ss_pred             -C---------------C------chHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccchhHH----HHH
Confidence             0               0      5599999999998 666655443  899999999998522111001111    111


Q ss_pred             hcCCCCCCCCCccceeHHHHHHHHHHhhccc
Q 039049          210 KGLRGEYPNTTVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       210 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  240 (305)
                      ...+      . .+..++|+|.++++++...
T Consensus       889 ~~~p------l-r~~sPEEVA~avlfLaSd~  912 (1887)
T 2uv8_A          889 EKMG------V-RTFSQKEMAFNLLGLLTPE  912 (1887)
T ss_dssp             HTTS------C-CCEEHHHHHHHHHGGGSHH
T ss_pred             HhcC------C-CCCCHHHHHHHHHHHhCCC
Confidence            1111      1 3458999999999999765

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.64  E-value=1.4e-15  Score=143.62  Aligned_cols=206  Identities=16%  Similarity=0.123  Sum_probs=147.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHH-HcCC-eEEEEEeCCCcccchhh-hhhccCccCceEEEEccCCCcchHHHHhc------
Q 039049            2 PEYCVTGGTGFIAAHLVKALL-DKGH-MVRTTVRDPEDLSKVGF-LWELNGAEERLKIMKADLLMEGSFDEAIQ------   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~-~~g~-~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   72 (305)
                      ++++||||+|.||+++++.|+ ++|. +|++++|+..+.+.... ...+...+.++.++++|+.|.+++.++++      
T Consensus       531 ~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~~~  610 (795)
T 3slk_A          531 GTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPDEH  610 (795)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTS
T ss_pred             cceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Confidence            679999999999999999999 7898 59999998543332222 22222334578999999999999998875      


Q ss_pred             CCCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCC
Q 039049           73 GVDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSD  148 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~  148 (305)
                      .+|.|||||+......    ..+.+...+++|+.++.++.+++..  .. +||++||.....+.+..             
T Consensus       611 ~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~--~l-~iV~~SS~ag~~g~~g~-------------  674 (795)
T 3slk_A          611 PLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP--DV-ALVLFSSVSGVLGSGGQ-------------  674 (795)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT--TS-EEEEEEETHHHHTCSSC-------------
T ss_pred             CCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh--CC-EEEEEccHHhcCCCCCC-------------
Confidence            3699999999876532    4567788999999999999998843  34 89999998765554321             


Q ss_pred             cccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHH
Q 039049          149 PDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDD  228 (305)
Q Consensus       149 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  228 (305)
                              ..|+.+|...+.+.+.+ ...|++++.+-||.+-.++....  ........+...        ....+..++
T Consensus       675 --------~~YaAaka~~~alA~~~-~~~Gi~v~sI~pG~v~t~g~~~~--~~~~~~~~~~~~--------g~~~l~~~e  735 (795)
T 3slk_A          675 --------GNYAAANSFLDALAQQR-QSRGLPTRSLAWGPWAEHGMAST--LREAEQDRLARS--------GLLPISTEE  735 (795)
T ss_dssp             --------HHHHHHHHHHHHHHHHH-HHTTCCEEEEEECCCSCCCHHHH--HHHHHHHHHHHT--------TBCCCCHHH
T ss_pred             --------HHHHHHHHHHHHHHHHH-HHcCCeEEEEECCeECcchhhcc--ccHHHHHHHHhc--------CCCCCCHHH
Confidence                    67999998888777665 45699999999998765431000  000011111111        123478889


Q ss_pred             HHHHHHHhhccccc
Q 039049          229 VVGAHILAMEETRA  242 (305)
Q Consensus       229 ~a~~~~~~~~~~~~  242 (305)
                      ....+..++..+..
T Consensus       736 ~~~~~~~~l~~~~~  749 (795)
T 3slk_A          736 GLSQFDAACGGAHT  749 (795)
T ss_dssp             HHHHHHHHHTSSCS
T ss_pred             HHHHHHHHHhCCCc
Confidence            99999888877544

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.63  E-value=1.2e-14  Score=133.47  Aligned_cols=222  Identities=14%  Similarity=0.061  Sum_probs=149.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccC-CCcchH-HHH---hcCCCE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADL-LMEGSF-DEA---IQGVDG   76 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~d~~~~-~~~---~~~~d~   76 (305)
                      |.++||||++.||+++++.|+++|++|++.+|+... .....+..   ...++..+.+|+ .+.+.+ ..+   +..+|+
T Consensus       323 kvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~-~~~~~i~~---~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDi  398 (604)
T 2et6_A          323 KVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDAT-KTVDEIKA---AGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDI  398 (604)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHHHH---TTCEEEEECCCHHHHHHHHHHHHHHHHSCCCE
T ss_pred             CeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHH-HHHHHHHh---cCCeEEEEEcChHHHHHHHHHHHHHhcCCCCE
Confidence            579999999999999999999999999998764321 11111211   123566777888 554432 222   337899


Q ss_pred             EEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCCCCc
Q 039049           77 VFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDP  149 (305)
Q Consensus        77 Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~  149 (305)
                      +|||||......    ..+.+...+++|+.++.++.+++...   .+-.++|++||.....+.+..              
T Consensus       399 LVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~--------------  464 (604)
T 2et6_A          399 LVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQ--------------  464 (604)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTB--------------
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCC--------------
Confidence            999999765432    45678889999999999998887432   144699999998654332211              


Q ss_pred             ccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeH
Q 039049          150 DYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHI  226 (305)
Q Consensus       150 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  226 (305)
                             ..|+.||.....+.+.++.+   +|+++..+.|+. -.+.    ...   ..    ..       ...+....
T Consensus       465 -------~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m----~~~---~~----~~-------~~~~~~~p  518 (604)
T 2et6_A          465 -------ANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAM----TLS---IM----RE-------QDKNLYHA  518 (604)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC---------------------------CCSSCG
T ss_pred             -------hhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCcc----ccc---cC----ch-------hhccCCCH
Confidence                   66999999999999888876   489999999983 2111    000   00    00       01234588


Q ss_pred             HHHHHHHHHhhcccc--cCceEEEec------------------CCcCHHHHHHHHHHhCC
Q 039049          227 DDVVGAHILAMEETR--ASGRLICSS------------------SVAHWSPIIEMLKATYP  267 (305)
Q Consensus       227 ~D~a~~~~~~~~~~~--~~~~~~~~~------------------~~~s~~el~~~i~~~~~  267 (305)
                      +|+|.++.+++....  .+..+.+.|                  ...+..++.+.+.+...
T Consensus       519 e~vA~~v~~L~s~~~~itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  579 (604)
T 2et6_A          519 DQVAPLLVYLGTDDVPVTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEITD  579 (604)
T ss_dssp             GGTHHHHHHTTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHhCCccCCCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHhc
Confidence            999999999886533  233344432                  23678888888887763

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.62  E-value=1.5e-14  Score=123.99  Aligned_cols=208  Identities=11%  Similarity=-0.058  Sum_probs=138.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHH-cCCeEEEEEeCCCcccch---------hhhh-hccCccCceEEEEccCCCcchHHHH
Q 039049            2 PEYCVTGGTGFIAAHLVKALLD-KGHMVRTTVRDPEDLSKV---------GFLW-ELNGAEERLKIMKADLLMEGSFDEA   70 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~-~g~~V~~~~r~~~~~~~~---------~~~~-~~~~~~~~~~~~~~D~~d~~~~~~~   70 (305)
                      |++|||||++.||+++++.|++ .|.+|+++.|+.+.....         ..+. ........+..+.+|+.|.+++.++
T Consensus        48 KvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~~~  127 (405)
T 3zu3_A           48 KRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQLT  127 (405)
T ss_dssp             SEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHH
T ss_pred             CEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHHHH
Confidence            6799999999999999999999 999999999876543211         0111 1111234678899999999888776


Q ss_pred             hc-------CCCEEEEeccccc---------------c-----------------------CCCCchhhhhhhhhHHHHH
Q 039049           71 IQ-------GVDGVFHTASPVL---------------V-----------------------PYDNNIQATLIDPCIKGTL  105 (305)
Q Consensus        71 ~~-------~~d~Vi~~a~~~~---------------~-----------------------~~~~~~~~~~~~~n~~~~~  105 (305)
                      ++       ++|++||+||...               +                       ....+.+...+++|..+..
T Consensus       128 v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~~~~  207 (405)
T 3zu3_A          128 IDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGEDW  207 (405)
T ss_dssp             HHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHHH
T ss_pred             HHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhchhHH
Confidence            64       5799999999741               1                       1134566777888887766


Q ss_pred             -HHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---c-
Q 039049          106 -NVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---C-  177 (305)
Q Consensus       106 -~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~-  177 (305)
                       .+++++...   .+-.++|.+||.......+..             .      ...|+.||...+.+.+.++.+   . 
T Consensus       208 ~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~~-------------~------~~aY~AaKaal~~ltrsLA~Ela~~~  268 (405)
T 3zu3_A          208 QMWIDALLDAGVLAEGAQTTAFTYLGEKITHDIY-------------W------NGSIGAAKKDLDQKVLAIRESLAAHG  268 (405)
T ss_dssp             HHHHHHHHHHTCEEEEEEEEEEECCCCGGGTTTT-------------T------TSHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHhhhhCCcEEEEEeCchhhCcCCCc-------------c------chHHHHHHHHHHHHHHHHHHHhCccc
Confidence             555554322   022589999997643322110             0      045999999999998888766   3 


Q ss_pred             CCcEEEEecCceecCCCCCCCCchH--HHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhcc
Q 039049          178 GIDMVVVNPSFVVGPLLAPQPTSTL--LLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEE  239 (305)
Q Consensus       178 ~~~~~i~Rp~~v~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  239 (305)
                      |+++.++.|+.+-.+..........  ..+.+.           ...+-..+|++.++.+++..
T Consensus       269 GIRVNaVaPG~i~T~~s~~ip~~p~y~~~l~~~-----------mkr~G~~Ed~a~~i~~L~sd  321 (405)
T 3zu3_A          269 GGDARVSVLKAVVSQASSAIPMMPLYLSLLFKV-----------MKEKGTHEGCIEQVYSLYKD  321 (405)
T ss_dssp             SCEEEEEECCCCCCHHHHTSTTHHHHHHHHHHH-----------HHHHTCCCCHHHHHHHHHHH
T ss_pred             CeEEEEEEeCCCcCchhhcCCCCcHHHHHHHHH-----------HhcCCCcHHHHHHHHHHHhc
Confidence            8999999999887664221111111  111111           22234457899999888865

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.61  E-value=2.3e-14  Score=142.30  Aligned_cols=225  Identities=13%  Similarity=0.082  Sum_probs=148.1

Q ss_pred             CcEEEeCCcch-HHHHHHHHHHHcCCeEEEEEeC-CCcccc-hhhh-hhccCccCceEEEEccCCCcchHHHHhc-----
Q 039049            2 PEYCVTGGTGF-IAAHLVKALLDKGHMVRTTVRD-PEDLSK-VGFL-WELNGAEERLKIMKADLLMEGSFDEAIQ-----   72 (305)
Q Consensus         2 ~~ilItG~~G~-iG~~l~~~l~~~g~~V~~~~r~-~~~~~~-~~~~-~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   72 (305)
                      +++|||||+|. ||.++++.|++.|++|++++++ ...... ...+ ......+.++.++.+|+.|.+++.++++     
T Consensus       653 KvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i~~~  732 (1878)
T 2uv9_A          653 KHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYIYDT  732 (1878)
T ss_dssp             CEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHCS
T ss_pred             CEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            67999999999 9999999999999999998644 332211 1112 1112223478899999999998887763     


Q ss_pred             ------CCCEEEEeccccccC-C----C--CchhhhhhhhhHHHHHHHHHHHHhc-----CCccEEEEeccceeeeccCC
Q 039049           73 ------GVDGVFHTASPVLVP-Y----D--NNIQATLIDPCIKGTLNVLSSCKKA-----KSVKRVVLTSSCSSIRYRHD  134 (305)
Q Consensus        73 ------~~d~Vi~~a~~~~~~-~----~--~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~~v~~SS~~~~~~~~~  134 (305)
                            .+|+||||||..... .    .  .+.+...+++|+.++.++++.++..     .+..+||++||.....+.  
T Consensus       733 ~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~gg--  810 (1878)
T 2uv9_A          733 KNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTFGN--  810 (1878)
T ss_dssp             SSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSSSC--
T ss_pred             hcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhccCC--
Confidence                  489999999986543 1    1  3567889999999999988763221     123589999997643221  


Q ss_pred             CCCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-c--CCcEEEEecCcee-cCCCCCCCCchHHHHHHHHh
Q 039049          135 AQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD-C--GIDMVVVNPSFVV-GPLLAPQPTSTLLLILAMVK  210 (305)
Q Consensus       135 ~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~--~~~~~i~Rp~~v~-G~~~~~~~~~~~~~~~~~~~  210 (305)
                                     .      ..|+.||...+.+.+.+..+ .  .++++.+.||.+- .+...    . .........
T Consensus       811 ---------------~------~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~----~-~~~~~~~~~  864 (1878)
T 2uv9_A          811 ---------------D------GLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMS----A-NNLVAEGVE  864 (1878)
T ss_dssp             ---------------C------SSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCS----H-HHHTHHHHH
T ss_pred             ---------------c------hHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCcccc----c-chhhHHHHH
Confidence                           0      45999999999987655433 2  3899999999887 33211    1 111111222


Q ss_pred             cCCCCCCCCCccceeHHHHHHHHHHhhcccc----cCceEEE--ecC---CcCHHHHHHH
Q 039049          211 GLRGEYPNTTVGFVHIDDVVGAHILAMEETR----ASGRLIC--SSS---VAHWSPIIEM  261 (305)
Q Consensus       211 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~----~~~~~~~--~~~---~~s~~el~~~  261 (305)
                      ..+      . .+...+|+|.++++++....    .+..+.+  .|.   ...+.++...
T Consensus       865 ~~p------l-r~~sPeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~~~l~el~~~  917 (1878)
T 2uv9_A          865 KLG------V-RTFSQQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQFIPDLKGLMTK  917 (1878)
T ss_dssp             TTT------C-CCBCHHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGGCTTHHHHHHH
T ss_pred             hcC------C-CCCCHHHHHHHHHHHhCCcccccccCcEEEEEcCCCccccCCHHHHHHH
Confidence            111      1 23489999999999987543    2444554  232   3445555443

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.60  E-value=1.6e-15  Score=146.42  Aligned_cols=205  Identities=13%  Similarity=0.076  Sum_probs=138.1

Q ss_pred             CcEEEeCCcch-HHHHHHHHHHHcCCeEEEEE-eCCCcccch-hhhhh-ccCccCceEEEEccCCCcchHHHHhc-----
Q 039049            2 PEYCVTGGTGF-IAAHLVKALLDKGHMVRTTV-RDPEDLSKV-GFLWE-LNGAEERLKIMKADLLMEGSFDEAIQ-----   72 (305)
Q Consensus         2 ~~ilItG~~G~-iG~~l~~~l~~~g~~V~~~~-r~~~~~~~~-~~~~~-~~~~~~~~~~~~~D~~d~~~~~~~~~-----   72 (305)
                      ++++||||+|. ||+++++.|++.|++|+++. |+....... ..+.. ......++.++++|+.|.+++.++++     
T Consensus       477 KvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I~e~  556 (1688)
T 2pff_A          477 KYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDT  556 (1688)
T ss_dssp             CCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHHHSC
T ss_pred             CEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence            57999999998 99999999999999999984 554433221 11211 11123468899999999998887763     


Q ss_pred             --------CCCEEEEeccccccC-C----C--CchhhhhhhhhHHHHHHHHHHHHhc-----CCccEEEEeccceeeecc
Q 039049           73 --------GVDGVFHTASPVLVP-Y----D--NNIQATLIDPCIKGTLNVLSSCKKA-----KSVKRVVLTSSCSSIRYR  132 (305)
Q Consensus        73 --------~~d~Vi~~a~~~~~~-~----~--~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~~v~~SS~~~~~~~  132 (305)
                              .+|++|||||..... .    .  .+.+...+++|+.++.++++.++..     .+..+||++||.....+ 
T Consensus       557 ~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~~G-  635 (1688)
T 2pff_A          557 EKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG-  635 (1688)
T ss_dssp             TTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTTSS-
T ss_pred             ccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhccC-
Confidence                    489999999976543 1    1  3456789999999999999887322     12358999999754321 


Q ss_pred             CCCCCCcccCCCCCCCcccccccchhHHHHHHHHHHH-HHHHHHHcC--CcEEEEecCceecCCCCCCCCchHHHHHHHH
Q 039049          133 HDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKE-AWRIAKDCG--IDMVVVNPSFVVGPLLAPQPTSTLLLILAMV  209 (305)
Q Consensus       133 ~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~-~~~~~~~~~--~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~  209 (305)
                       .               .      ..|+.||.+.+.+ .+.++++.+  ++++.+.||.+.|.........         
T Consensus       636 -g---------------~------saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~e~---------  684 (1688)
T 2pff_A          636 -G---------------D------GMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNI---------  684 (1688)
T ss_dssp             -C---------------B------TTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTTTT---------
T ss_pred             -C---------------c------hHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCchH---------
Confidence             0               1      5699999999998 444444333  7888899998875321110000         


Q ss_pred             hcCCCCCCCCCccceeHHHHHHHHHHhhccc
Q 039049          210 KGLRGEYPNTTVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       210 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  240 (305)
                       ... ........+..++|+|.++++++...
T Consensus       685 -~~~-~l~~iplR~~sPEEVA~aIlFLaSd~  713 (1688)
T 2pff_A          685 -IAE-GIEKMGVRTFSQKEMAFNLLGLLTPE  713 (1688)
T ss_dssp             -CST-TTSSSSCCCCCCCTTHHHHHHHTSTT
T ss_pred             -HHH-HHHhCCCCCCCHHHHHHHHHHHhCCC
Confidence             000 00001113458899999999999765

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.57  E-value=4.9e-14  Score=121.95  Aligned_cols=211  Identities=14%  Similarity=-0.053  Sum_probs=136.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHH-cCCeEEEEEeCCCcccch---------hhh-hhccCccCceEEEEccCCCcchHHHH
Q 039049            2 PEYCVTGGTGFIAAHLVKALLD-KGHMVRTTVRDPEDLSKV---------GFL-WELNGAEERLKIMKADLLMEGSFDEA   70 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~-~g~~V~~~~r~~~~~~~~---------~~~-~~~~~~~~~~~~~~~D~~d~~~~~~~   70 (305)
                      |++|||||++.||+++++.|++ .|.+|+++.|+.+.....         ..+ ......+..+..+.+|+.|.+++.++
T Consensus        62 KvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~~~  141 (422)
T 3s8m_A           62 KKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARAQV  141 (422)
T ss_dssp             SEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHH
T ss_pred             CEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHHHH
Confidence            6799999999999999999999 999999999986543321         001 11112234678899999998877665


Q ss_pred             h--------cCCCEEEEecccc-------------c--c-----------------------CCCCchhhhhhhhhHHHH
Q 039049           71 I--------QGVDGVFHTASPV-------------L--V-----------------------PYDNNIQATLIDPCIKGT  104 (305)
Q Consensus        71 ~--------~~~d~Vi~~a~~~-------------~--~-----------------------~~~~~~~~~~~~~n~~~~  104 (305)
                      +        .++|++|||||..             .  +                       ....+.+...+++|..+.
T Consensus       142 v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~~~  221 (422)
T 3s8m_A          142 IELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQD  221 (422)
T ss_dssp             HHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHH
T ss_pred             HHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhchhH
Confidence            5        3579999999862             0  0                       112344555666776665


Q ss_pred             H-HHHHHHHhcC---CccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---
Q 039049          105 L-NVLSSCKKAK---SVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---  177 (305)
Q Consensus       105 ~-~l~~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---  177 (305)
                      . .+++++....   +..++|++||.......+..                   ....|+.||...+.+.+.++.+.   
T Consensus       222 ~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~-------------------~~~aY~ASKaAl~~lTrsLA~Ela~~  282 (422)
T 3s8m_A          222 WELWIDALEGAGVLADGARSVAFSYIGTEITWPIY-------------------WHGALGKAKVDLDRTAQRLNARLAKH  282 (422)
T ss_dssp             HHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHH-------------------TSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCc-------------------cchHHHHHHHHHHHHHHHHHHHhCcc
Confidence            4 5555543320   22589999997643221100                   00559999999999998888764   


Q ss_pred             CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhccc
Q 039049          178 GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       178 ~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  240 (305)
                      |+++.++.|+.+-.+..... ......+.....  +      ....--.+|++.++.+++...
T Consensus       283 GIRVNaVaPG~i~T~~~~~i-p~~~~~~~~~~~--~------m~r~G~pEdva~~v~~L~sd~  336 (422)
T 3s8m_A          283 GGGANVAVLKSVVTQASAAI-PVMPLYISMVYK--I------MKEKGLHEGTIEQLDRLFRER  336 (422)
T ss_dssp             TCEEEEEEECCCCCTTGGGS-THHHHHHHHHHH--H------HHHTTCCCCHHHHHHHHHHHT
T ss_pred             CEEEEEEEcCCCcChhhhcC-CCChHHHHHHHh--h------hcCCcChHHHHHHHHHHhcch
Confidence            89999999999977653221 111111111100  0      112234578888888887643

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.56  E-value=1e-13  Score=120.83  Aligned_cols=211  Identities=12%  Similarity=-0.044  Sum_probs=134.5

Q ss_pred             CcEEEeCCcchHHHH--HHHHHHHcCCeEEEEEeCCCcccc---------hhhhhh-ccCccCceEEEEccCCCcchHHH
Q 039049            2 PEYCVTGGTGFIAAH--LVKALLDKGHMVRTTVRDPEDLSK---------VGFLWE-LNGAEERLKIMKADLLMEGSFDE   69 (305)
Q Consensus         2 ~~ilItG~~G~iG~~--l~~~l~~~g~~V~~~~r~~~~~~~---------~~~~~~-~~~~~~~~~~~~~D~~d~~~~~~   69 (305)
                      |+++||||++.||.+  +++.|++.|++|+++.|+......         ...+.. .......+..+++|+.|.+++.+
T Consensus        61 K~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v~~  140 (418)
T 4eue_A           61 KKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETKDK  140 (418)
T ss_dssp             SEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHHHH
Confidence            679999999999999  999999999999999997654221         011111 11123468899999999988877


Q ss_pred             Hhc-------CCCEEEEeccccc---------------c-----------------------CCCCchhhhhhhhhHHHH
Q 039049           70 AIQ-------GVDGVFHTASPVL---------------V-----------------------PYDNNIQATLIDPCIKGT  104 (305)
Q Consensus        70 ~~~-------~~d~Vi~~a~~~~---------------~-----------------------~~~~~~~~~~~~~n~~~~  104 (305)
                      +++       ++|++|||||...               +                       ....+.+...+++|..+.
T Consensus       141 ~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~~~~  220 (418)
T 4eue_A          141 VIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMGGED  220 (418)
T ss_dssp             HHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHSSHH
T ss_pred             HHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhhHHH
Confidence            664       5799999999741               0                       012334455566666555


Q ss_pred             H-HHHHHHHhcC---CccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH----
Q 039049          105 L-NVLSSCKKAK---SVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD----  176 (305)
Q Consensus       105 ~-~l~~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----  176 (305)
                      . .+++++....   +-.++|.+||.......+..             .      ...|+.||...+.+.+.++.+    
T Consensus       221 ~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~-------------~------~~aY~ASKaAL~~ltrsLA~ELa~~  281 (418)
T 4eue_A          221 WQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIY-------------R------EGTIGIAKKDLEDKAKLINEKLNRV  281 (418)
T ss_dssp             HHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTT-------------T------TSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCcc-------------c------cHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            4 4455544321   22479999987643221110             0      045999999999988887755    


Q ss_pred             cCCcEEEEecCceecCCCCCCCCchH--HHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhccccc
Q 039049          177 CGIDMVVVNPSFVVGPLLAPQPTSTL--LLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRA  242 (305)
Q Consensus       177 ~~~~~~i~Rp~~v~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  242 (305)
                      .|+++.++.|+.+-.+..........  ..+....+           ..-..+|++.++.+++...--
T Consensus       282 ~GIrVN~V~PG~v~T~~s~~ip~~p~y~~~~~~~mk-----------~~G~~E~v~e~~~~L~sd~~~  338 (418)
T 4eue_A          282 IGGRAFVSVNKALVTKASAYIPTFPLYAAILYKVMK-----------EKNIHENCIMQIERMFSEKIY  338 (418)
T ss_dssp             HSCEEEEEECCCCCCHHHHTSTTHHHHHHHHHHHHH-----------HTTCCCCHHHHHHHHHHHTTS
T ss_pred             cCeEEEEEECCcCcChhhhcCCCCcHHHHHHHHHHh-----------hcCChHHHHHHHHHHhhcccc
Confidence            57999999999987654221111111  11111111           112357888888888875433

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.55  E-value=4.9e-14  Score=129.41  Aligned_cols=219  Identities=15%  Similarity=0.068  Sum_probs=144.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCC---------CcccchhhhhhccCccCceEEEEccCCCcchHHHHh-
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDP---------EDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAI-   71 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-   71 (305)
                      |.++||||++.||+++++.|+++|++|++.+|+.         +.....  ...+......+   .+|+.|.++.++++ 
T Consensus         9 kvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~--~~~i~~~g~~~---~~d~~d~~~~~~~v~   83 (604)
T 2et6_A            9 KVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVV--VDEIVKNGGVA---VADYNNVLDGDKIVE   83 (604)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHH--HHHHHHTTCEE---EEECCCTTCHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHH--HHHHHhcCCeE---EEEcCCHHHHHHHHH
Confidence            5799999999999999999999999999987754         211111  11111111122   35766665444433 


Q ss_pred             ------cCCCEEEEeccccccC----CCCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCC
Q 039049           72 ------QGVDGVFHTASPVLVP----YDNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQ  137 (305)
Q Consensus        72 ------~~~d~Vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~  137 (305)
                            ..+|++|||||.....    ...+.+...+++|+.++..+.+++.    +. +-.++|++||.....+.+..  
T Consensus        84 ~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~-~~G~IVnisS~ag~~~~~~~--  160 (604)
T 2et6_A           84 TAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQ-KYGRIVNTSSPAGLYGNFGQ--  160 (604)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHHCCTTB--
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEECCHHHcCCCCCc--
Confidence                  3689999999976532    1456688899999999999988864    33 44699999998754432221  


Q ss_pred             CcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCC
Q 039049          138 VSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRG  214 (305)
Q Consensus       138 ~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  214 (305)
                                         ..|+.||.....+.+.++.+   +|+++..+.|+ +..+           +..    ..  
T Consensus       161 -------------------~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~-----------m~~----~~--  203 (604)
T 2et6_A          161 -------------------ANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSR-----------MTE----SI--  203 (604)
T ss_dssp             -------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCH-----------HHH----TT--
T ss_pred             -------------------hHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCc-----------ccc----cc--
Confidence                               66999999999999888876   48999999996 2111           000    00  


Q ss_pred             CCCCCCccceeHHHHHHHHHHhhcccc--cCceEEEec-------------------CCcCHHHHHHHHHHhC
Q 039049          215 EYPNTTVGFVHIDDVVGAHILAMEETR--ASGRLICSS-------------------SVAHWSPIIEMLKATY  266 (305)
Q Consensus       215 ~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~~~~~-------------------~~~s~~el~~~i~~~~  266 (305)
                       .+.........+|++.++++++....  .+..+.+.|                   ...+..++.+.+.+..
T Consensus       204 -~~~~~~~~~~pe~vA~~v~~L~s~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  275 (604)
T 2et6_A          204 -MPPPMLEKLGPEKVAPLVLYLSSAENELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEIL  275 (604)
T ss_dssp             -SCHHHHTTCSHHHHHHHHHHHTSSSCCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHT
T ss_pred             -CChhhhccCCHHHHHHHHHHHhCCcccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhh
Confidence             00001223589999999999987542  133344322                   2356788888777654

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.44  E-value=2.8e-13  Score=97.72  Aligned_cols=97  Identities=23%  Similarity=0.240  Sum_probs=77.0

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcC-CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKG-HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFH   79 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~   79 (305)
                      |++|+|+|+ |++|+++++.|++.| ++|++++|++++.....        ..++.++.+|+.+.+.+.++++++|+|||
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~~~d~vi~   75 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN--------RMGVATKQVDAKDEAGLAKALGGFDAVIS   75 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH--------TTTCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH--------hCCCcEEEecCCCHHHHHHHHcCCCEEEE
Confidence            478999999 999999999999999 99999999865433221        22678889999999999999999999999


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEecc
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSS  125 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS  125 (305)
                      +++...                  ...+++.+.+. ++++|...++
T Consensus        76 ~~~~~~------------------~~~~~~~~~~~-g~~~~~~~~~  102 (118)
T 3ic5_A           76 AAPFFL------------------TPIIAKAAKAA-GAHYFDLTED  102 (118)
T ss_dssp             CSCGGG------------------HHHHHHHHHHT-TCEEECCCSC
T ss_pred             CCCchh------------------hHHHHHHHHHh-CCCEEEecCc
Confidence            985421                  45778888888 8766654433

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.36  E-value=4.6e-12  Score=132.04  Aligned_cols=168  Identities=19%  Similarity=0.158  Sum_probs=118.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCe-EEEEEeCCCcccchh-hhhhccCccCceEEEEccCCCcchHHHHhc------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHM-VRTTVRDPEDLSKVG-FLWELNGAEERLKIMKADLLMEGSFDEAIQ------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~-V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------~   73 (305)
                      ++++||||+|.||+++++.|+++|.+ |++++|+..+..... ........+.++.++.+|+.|.+++.++++      .
T Consensus      1885 k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~g~ 1964 (2512)
T 2vz8_A         1885 KSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQLGP 1964 (2512)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhcCC
Confidence            67999999999999999999999987 788888865432211 122222223468889999999988887664      5


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCCCcccCCCCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA-KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSD  148 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~  148 (305)
                      +|+|||+|+......    ..+.+...+++|+.++.++.+++... ....+||++||.....+.+..             
T Consensus      1965 id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~g~------------- 2031 (2512)
T 2vz8_A         1965 VGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNAGQ------------- 2031 (2512)
T ss_dssp             EEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCTTC-------------
T ss_pred             CcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCCCc-------------
Confidence            799999999764321    45667889999999999998877543 123689999998754432221             


Q ss_pred             cccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceec
Q 039049          149 PDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVG  191 (305)
Q Consensus       149 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G  191 (305)
                              ..|+.+|...+.+.+... ..|++...+..+.+-+
T Consensus      2032 --------~~Y~aaKaal~~l~~~rr-~~Gl~~~a~~~g~~~~ 2065 (2512)
T 2vz8_A         2032 --------ANYGFANSAMERICEKRR-HDGLPGLAVQWGAIGD 2065 (2512)
T ss_dssp             --------HHHHHHHHHHHHHHHHHH-HTTSCCCEEEECCBCT
T ss_pred             --------HHHHHHHHHHHHHHHHHH-HCCCcEEEEEccCcCC
Confidence                    669999999999988654 4588988888876533

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.25  E-value=8.5e-11  Score=122.78  Aligned_cols=229  Identities=15%  Similarity=0.105  Sum_probs=142.5

Q ss_pred             CcEEEeCCcch-HHHHHHHHHHHcCCeEEEEEeCCCccc--chhhhh-hccCccCceEEEEccCCCcchHHHHhc-----
Q 039049            2 PEYCVTGGTGF-IAAHLVKALLDKGHMVRTTVRDPEDLS--KVGFLW-ELNGAEERLKIMKADLLMEGSFDEAIQ-----   72 (305)
Q Consensus         2 ~~ilItG~~G~-iG~~l~~~l~~~g~~V~~~~r~~~~~~--~~~~~~-~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   72 (305)
                      |+++||||++. ||+++++.|++.|.+|++.+|+.+...  ....+. ........+..+++|+.|.+++.++++     
T Consensus      2137 KvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i~~~ 2216 (3089)
T 3zen_D         2137 EVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWVGTE 2216 (3089)
T ss_dssp             CEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHTSC
T ss_pred             CEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHHHhh
Confidence            67999999999 999999999999999999999876411  011111 122223467889999999988887642     


Q ss_pred             ------CCCEEEEeccc----cccC---------CCCchhhhhhhhhHHHHHHHHHHHHhc---CCcc---EEEEeccce
Q 039049           73 ------GVDGVFHTASP----VLVP---------YDNNIQATLIDPCIKGTLNVLSSCKKA---KSVK---RVVLTSSCS  127 (305)
Q Consensus        73 ------~~d~Vi~~a~~----~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~---~~v~~SS~~  127 (305)
                            .+|++|||||.    ....         .+....+..+++|+.++..++..+...   .+..   .+|..+|..
T Consensus      2217 ~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~ss~ 2296 (3089)
T 3zen_D         2217 QTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPGSPN 2296 (3089)
T ss_dssp             CEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEECSS
T ss_pred             hhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEECCcc
Confidence                  47999999997    1110         012223334888999998888776432   1211   122222211


Q ss_pred             eeeccCCCCCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH--c--CCcEEEEecCceecCCCCCCCCchHH
Q 039049          128 SIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD--C--GIDMVVVNPSFVVGPLLAPQPTSTLL  203 (305)
Q Consensus       128 ~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~--~--~~~~~i~Rp~~v~G~~~~~~~~~~~~  203 (305)
                       .+..+.               .      ..|+.||...+.+.+.++.+  .  ++.++.+.||.+-+..........  
T Consensus      2297 -~g~~g~---------------~------~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~~~~~~-- 2352 (3089)
T 3zen_D         2297 -RGMFGG---------------D------GAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMGQNDAI-- 2352 (3089)
T ss_dssp             -TTSCSS---------------C------SSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTTTTTTT--
T ss_pred             -cccCCC---------------c------hHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCcccccchhH--
Confidence             110000               0      45999999999999999888  3  578888999988754322111111  


Q ss_pred             HHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhccccc---C-ce--EEEecC----CcCHHHHHHHHH
Q 039049          204 LILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRA---S-GR--LICSSS----VAHWSPIIEMLK  263 (305)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~---~-~~--~~~~~~----~~s~~el~~~i~  263 (305)
                        ........      .+ ....+|+|.++++++.....   . ..  ..++|.    ..++.++...+.
T Consensus      2353 --~~~~~~~~------~r-~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~~~~~~~~~~~~~~ 2413 (3089)
T 3zen_D         2353 --VSAVEEAG------VT-TYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGDIKIDMAELAAKAR 2413 (3089)
T ss_dssp             --HHHHGGGS------CB-CEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSSCCCCHHHHTHHHH
T ss_pred             --HHHHHhcC------CC-CCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCcCCCCHHHHHHHHH
Confidence              11111111      12 23899999999999875322   1 12  334332    357888887654

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=99.24  E-value=7.3e-12  Score=106.60  Aligned_cols=172  Identities=14%  Similarity=0.076  Sum_probs=114.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-------eEEEEEeC----CCcccc-hhhhhhccCccCceEEEEccCCCcchHHH
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-------MVRTTVRD----PEDLSK-VGFLWELNGAEERLKIMKADLLMEGSFDE   69 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-------~V~~~~r~----~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~   69 (305)
                      |||+||||+||+|++++..|+..|+       +|.+++++    .++... ...+..   ..  ..+ ..|+...+++.+
T Consensus         6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~---~~--~~~-~~~i~~~~~~~~   79 (329)
T 1b8p_A            6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDD---CA--FPL-LAGMTAHADPMT   79 (329)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHT---TT--CTT-EEEEEEESSHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhh---hc--ccc-cCcEEEecCcHH
Confidence            5899999999999999999998885       78888776    221111 111111   00  011 235555567888


Q ss_pred             HhcCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCcc-EEEEeccceeeeccCCCCCCcccCCCCCCC
Q 039049           70 AIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVK-RVVLTSSCSSIRYRHDAQQVSPLNESHWSD  148 (305)
Q Consensus        70 ~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~  148 (305)
                      +++++|+|||+|+.....  .....+++..|+.+++++++.+++..+.+ +||++|...-...       ....+..+..
T Consensus        80 al~~aD~Vi~~ag~~~~~--g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t-------~~~~~~~~~~  150 (329)
T 1b8p_A           80 AFKDADVALLVGARPRGP--GMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNA-------YIAMKSAPSL  150 (329)
T ss_dssp             HTTTCSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHH-------HHHHHTCTTS
T ss_pred             HhCCCCEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHH-------HHHHHHcCCC
Confidence            999999999999976532  22345688999999999999999982134 8899886221000       0111111000


Q ss_pred             cccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCC
Q 039049          149 PDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPL  193 (305)
Q Consensus       149 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~  193 (305)
                      |.   .  ..|+.+++...++...+++..+++...++...|+|..
T Consensus       151 p~---~--~v~g~t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~H  190 (329)
T 1b8p_A          151 PA---K--NFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNH  190 (329)
T ss_dssp             CG---G--GEEECCHHHHHHHHHHHHHHHTCCGGGEESCEEEBCS
T ss_pred             CH---H--HEEEeecHHHHHHHHHHHHHhCcCHHHceEEEEEecc
Confidence            10   0  3477788888888888888889888888877788854

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=99.19  E-value=9.4e-11  Score=99.52  Aligned_cols=117  Identities=12%  Similarity=0.043  Sum_probs=82.7

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcC--CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKG--HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      +|||+||||+||+|++++..|+..|  ++|+++++++. ......+..... ...+..    +.+.+++.++++++|+||
T Consensus         8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~-~~~~~dL~~~~~-~~~v~~----~~~t~d~~~al~gaDvVi   81 (326)
T 1smk_A            8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA-PGVTADISHMDT-GAVVRG----FLGQQQLEAALTGMDLII   81 (326)
T ss_dssp             CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH-HHHHHHHHTSCS-SCEEEE----EESHHHHHHHHTTCSEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc-HhHHHHhhcccc-cceEEE----EeCCCCHHHHcCCCCEEE
Confidence            3689999999999999999999988  78999887654 111111211100 001211    223456778899999999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccc
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSC  126 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~  126 (305)
                      |+|+.....  ......+...|+.+++++++.+.+. +.+.+|+++|.
T Consensus        82 ~~ag~~~~~--g~~r~dl~~~N~~~~~~i~~~i~~~-~p~~~viv~SN  126 (326)
T 1smk_A           82 VPAGVPRKP--GMTRDDLFKINAGIVKTLCEGIAKC-CPRAIVNLISN  126 (326)
T ss_dssp             ECCCCCCCS--SCCCSHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCS
T ss_pred             EcCCcCCCC--CCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEECC
Confidence            999975532  2233457899999999999999998 77777777763

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.06  E-value=1.1e-11  Score=103.66  Aligned_cols=79  Identities=19%  Similarity=0.166  Sum_probs=63.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhh-hhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGF-LWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ++++||||+|++|+++++.|++.|.+|++++|+.++...... +...    .++.++.+|+.+.+++.++++++|+|||+
T Consensus       120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~DvlVn~  195 (287)
T 1lu9_A          120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR----FKVNVTAAETADDASRAEAVKGAHFVFTA  195 (287)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH----HTCCCEEEECCSHHHHHHHTTTCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc----CCcEEEEecCCCHHHHHHHHHhCCEEEEC
Confidence            679999999999999999999999999999998654332211 1110    14677889999999999999999999999


Q ss_pred             cccc
Q 039049           81 ASPV   84 (305)
Q Consensus        81 a~~~   84 (305)
                      ++..
T Consensus       196 ag~g  199 (287)
T 1lu9_A          196 GAIG  199 (287)
T ss_dssp             CCTT
T ss_pred             CCcc
Confidence            9864

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=99.05  E-value=6.6e-10  Score=93.84  Aligned_cols=170  Identities=12%  Similarity=0.065  Sum_probs=101.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC--eEEEEEe--CCCcccc-hhhhhhc-cCccCceEEEEccCCCcchHHHHhcCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH--MVRTTVR--DPEDLSK-VGFLWEL-NGAEERLKIMKADLLMEGSFDEAIQGVD   75 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r--~~~~~~~-~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~d   75 (305)
                      |||+||||+||+|++++..|+..|.  ++.++++  +..+... ...+... +....++.+...    .+++.++++++|
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~----~d~l~~al~gaD   76 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVE----SDENLRIIDESD   76 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEE----ETTCGGGGTTCS
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeC----CcchHHHhCCCC
Confidence            5899999999999999999998885  5777766  3221111 1111111 110012222221    123556788999


Q ss_pred             EEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCccccccc
Q 039049           76 GVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHY  155 (305)
Q Consensus        76 ~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  155 (305)
                      +|||+|+.....  ......++..|+.+++++++++++. + +++|+++|--+.--. .    ........ .+.     
T Consensus        77 ~Vi~~Ag~~~~~--g~~r~dl~~~N~~i~~~i~~~i~~~-~-~~~vlv~SNPv~~~t-~----~~~k~~~~-p~~-----  141 (313)
T 1hye_A           77 VVIITSGVPRKE--GMSRMDLAKTNAKIVGKYAKKIAEI-C-DTKIFVITNPVDVMT-Y----KALVDSKF-ERN-----  141 (313)
T ss_dssp             EEEECCSCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHH-C-CCEEEECSSSHHHHH-H----HHHHHHCC-CTT-----
T ss_pred             EEEECCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHHh-C-CeEEEEecCcHHHHH-H----HHHHhhCc-Chh-----
Confidence            999999976532  2234557999999999999999999 7 878877774321110 0    00011001 011     


Q ss_pred             chhHHH-HHHHHHHHHHHHHHHcCCcEEEEecCceecC
Q 039049          156 NLWYAY-AKTIAEKEAWRIAKDCGIDMVVVNPSFVVGP  192 (305)
Q Consensus       156 ~~~Y~~-sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~  192 (305)
                       ..+|. +.+...++....++..+++..-++. .++|.
T Consensus       142 -rviG~gt~LD~~r~~~~la~~lgv~~~~v~~-~v~G~  177 (313)
T 1hye_A          142 -QVFGLGTHLDSLRFKVAIAKFFGVHIDEVRT-RIIGE  177 (313)
T ss_dssp             -SEEECTTHHHHHHHHHHHHHHHTCCGGGEEC-CEEEC
T ss_pred             -cEEEeCccHHHHHHHHHHHHHhCcCHHHeEE-EEeec
Confidence             33555 5555666666667777776655665 45553

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=99.01  E-value=1.3e-10  Score=97.62  Aligned_cols=115  Identities=17%  Similarity=0.047  Sum_probs=77.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC--eEEEEEe--CCCcccc-hhhhhhccCccCceEEEEccCCCcchHHHHhcCCCE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH--MVRTTVR--DPEDLSK-VGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDG   76 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r--~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   76 (305)
                      |||+||||+|++|++++..|+..|+  ++.++++  +.++... ...+........++.+.. +  +    .+.++++|+
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aDv   73 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--G----YEDTAGSDV   73 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--C----GGGGTTCSE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--C----HHHhCCCCE
Confidence            5799999999999999999998875  5777766  3322111 111111100112333332 2  2    344789999


Q ss_pred             EEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccc
Q 039049           77 VFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSC  126 (305)
Q Consensus        77 Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~  126 (305)
                      |||+|+.....  ......++..|+.+++++++.+++. +.+.+|+++|.
T Consensus        74 Vi~~ag~~~~~--g~~r~dl~~~N~~i~~~i~~~i~~~-~p~~~viv~SN  120 (303)
T 1o6z_A           74 VVITAGIPRQP--GQTRIDLAGDNAPIMEDIQSSLDEH-NDDYISLTTSN  120 (303)
T ss_dssp             EEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHTT-CSCCEEEECCS
T ss_pred             EEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEeCC
Confidence            99999975532  2233457899999999999999998 77778887764

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=99.00  E-value=1.3e-09  Score=81.16  Aligned_cols=101  Identities=16%  Similarity=0.138  Sum_probs=72.0

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHH-hcCCCEEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEA-IQGVDGVFH   79 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~Vi~   79 (305)
                      |++|+|+|+ |.+|+.+++.|.+.|++|+++.|+++......        ......+.+|..+.+.+.++ +.++|+||+
T Consensus         6 ~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~--------~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~   76 (144)
T 2hmt_A            6 NKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA--------SYATHAVIANATEENELLSLGIRNFEYVIV   76 (144)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT--------TTCSEEEECCTTCHHHHHTTTGGGCSEEEE
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HhCCEEEEeCCCCHHHHHhcCCCCCCEEEE
Confidence            467999998 99999999999999999999988754322111        11346778999888777765 678999999


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccce
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCS  127 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  127 (305)
                      +++..            .+.|    ..+.+.+++. +.+++|..++..
T Consensus        77 ~~~~~------------~~~~----~~~~~~~~~~-~~~~ii~~~~~~  107 (144)
T 2hmt_A           77 AIGAN------------IQAS----TLTTLLLKEL-DIPNIWVKAQNY  107 (144)
T ss_dssp             CCCSC------------HHHH----HHHHHHHHHT-TCSEEEEECCSH
T ss_pred             CCCCc------------hHHH----HHHHHHHHHc-CCCeEEEEeCCH
Confidence            87652            1122    2355566777 667777766543

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.92  E-value=6.9e-09  Score=77.01  Aligned_cols=73  Identities=26%  Similarity=0.330  Sum_probs=58.7

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHH-hcCCCEEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEA-IQGVDGVFH   79 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~Vi~   79 (305)
                      |++|+|+|+ |.+|+++++.|.+.|++|+++.++++......        ..++.++.+|..+++.+.++ ++++|+||.
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~--------~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~   76 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLE--------DEGFDAVIADPTDESFYRSLDLEGVSAVLI   76 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH--------HTTCEEEECCTTCHHHHHHSCCTTCSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH--------HCCCcEEECCCCCHHHHHhCCcccCCEEEE
Confidence            568999997 99999999999999999999999765332221        11568899999999888876 458999997


Q ss_pred             ecc
Q 039049           80 TAS   82 (305)
Q Consensus        80 ~a~   82 (305)
                      +.+
T Consensus        77 ~~~   79 (141)
T 3llv_A           77 TGS   79 (141)
T ss_dssp             CCS
T ss_pred             ecC
Confidence            765

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.90  E-value=2.4e-09  Score=94.84  Aligned_cols=107  Identities=16%  Similarity=0.208  Sum_probs=75.9

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      |++|+|+| +|++|+++++.|++.|++|++.+|+.++....   .   ....++..+.+|+.|.+++.++++++|+|||+
T Consensus         3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~l---a---~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~   75 (450)
T 1ff9_A            3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKL---S---AGVQHSTPISLDVNDDAALDAEVAKHDLVISL   75 (450)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHT---T---TTCTTEEEEECCTTCHHHHHHHHTTSSEEEEC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHH---H---HhcCCceEEEeecCCHHHHHHHHcCCcEEEEC
Confidence            46899998 79999999999999999999999976433221   1   11124678889999998899999999999999


Q ss_pred             ccccccCCCCchhhhhhh--hh-------HHHHHHHHHHHHhcCCcc
Q 039049           81 ASPVLVPYDNNIQATLID--PC-------IKGTLNVLSSCKKAKSVK  118 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~--~n-------~~~~~~l~~~~~~~~~~~  118 (305)
                      ++.....   ......++  .|       ...+.+++++|+++ |++
T Consensus        76 a~~~~~~---~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~a-Gv~  118 (450)
T 1ff9_A           76 IPYTFHA---TVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDA-GIT  118 (450)
T ss_dssp             CC--CHH---HHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHT-TCE
T ss_pred             Cccccch---HHHHHHHhCCCeEEEeecccHHHHHHHHHHHHC-CCe
Confidence            9874321   00111111  11       23578899999888 764

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.90  E-value=4e-09  Score=92.33  Aligned_cols=81  Identities=12%  Similarity=0.094  Sum_probs=62.9

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcC---CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcC--CC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKG---HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQG--VD   75 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d   75 (305)
                      |++|+|+|| |++|+++++.|++.|   .+|++.+|+.++........... ...++..+.+|+.|.+++.+++++  +|
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~-~~~~~~~~~~D~~d~~~l~~~l~~~~~D   78 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAK-GYGEIDITTVDADSIEELVALINEVKPQ   78 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHT-TCCCCEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhh-cCCceEEEEecCCCHHHHHHHHHhhCCC
Confidence            899999998 999999999999998   38999999876544322111100 013578999999999999999986  89


Q ss_pred             EEEEeccc
Q 039049           76 GVFHTASP   83 (305)
Q Consensus        76 ~Vi~~a~~   83 (305)
                      +|||+++.
T Consensus        79 vVin~ag~   86 (405)
T 4ina_A           79 IVLNIALP   86 (405)
T ss_dssp             EEEECSCG
T ss_pred             EEEECCCc
Confidence            99999976

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.80  E-value=1.6e-08  Score=87.38  Aligned_cols=92  Identities=21%  Similarity=0.163  Sum_probs=71.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      |||+|+|| |++|+.+++.|++ .++|++.+|+.++....         .+.+..+..|+.|.+++.++++++|+||+++
T Consensus        17 mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~---------~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~   85 (365)
T 3abi_A           17 MKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKV---------KEFATPLKVDASNFDKLVEVMKEFELVIGAL   85 (365)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHH---------TTTSEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             cEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHH---------hccCCcEEEecCCHHHHHHHHhCCCEEEEec
Confidence            68999998 9999999998865 58999998876543322         1256788899999999999999999999998


Q ss_pred             cccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEec
Q 039049           82 SPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS  124 (305)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  124 (305)
                      ++..                  ...++++|.++ + +++|=+|
T Consensus        86 p~~~------------------~~~v~~~~~~~-g-~~yvD~s  108 (365)
T 3abi_A           86 PGFL------------------GFKSIKAAIKS-K-VDMVDVS  108 (365)
T ss_dssp             CGGG------------------HHHHHHHHHHH-T-CEEEECC
T ss_pred             CCcc------------------cchHHHHHHhc-C-cceEeee
Confidence            7632                  23567788887 6 3666554

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.77  E-value=5.1e-08  Score=71.99  Aligned_cols=97  Identities=16%  Similarity=0.126  Sum_probs=67.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHH-hcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEA-IQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~Vi~~   80 (305)
                      |+|+|+|+ |++|+++++.|.+.|++|+++.|+++....   +...    .++.++.+|..+.+.+.+. ++++|+||++
T Consensus         5 m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~---~~~~----~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~   76 (140)
T 1lss_A            5 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKK---ASAE----IDALVINGDCTKIKTLEDAGIEDADMYIAV   76 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH---HHHH----CSSEEEESCTTSHHHHHHTTTTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHH---HHHh----cCcEEEEcCCCCHHHHHHcCcccCCEEEEe
Confidence            68999997 999999999999999999999987643221   1111    1456788998887777655 6789999999


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEec
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS  124 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  124 (305)
                      ....             ..|    ..+.+.++.. +.+++|..+
T Consensus        77 ~~~~-------------~~~----~~~~~~~~~~-~~~~ii~~~  102 (140)
T 1lss_A           77 TGKE-------------EVN----LMSSLLAKSY-GINKTIARI  102 (140)
T ss_dssp             CSCH-------------HHH----HHHHHHHHHT-TCCCEEEEC
T ss_pred             eCCc-------------hHH----HHHHHHHHHc-CCCEEEEEe
Confidence            6431             112    2444556666 666777543

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=98.70  E-value=2.2e-07  Score=79.13  Aligned_cols=84  Identities=7%  Similarity=-0.082  Sum_probs=63.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHH-HcCCeEEEEEeCCCcccch---------hhh-hhccCccCceEEEEccCCCcchHHHH
Q 039049            2 PEYCVTGGTGFIAAHLVKALL-DKGHMVRTTVRDPEDLSKV---------GFL-WELNGAEERLKIMKADLLMEGSFDEA   70 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~-~~g~~V~~~~r~~~~~~~~---------~~~-~~~~~~~~~~~~~~~D~~d~~~~~~~   70 (305)
                      |++|||||++.+|.+.+..|+ ..|..|+++.+..+...+.         ... ......+.....+.+|+.+.+.+.++
T Consensus        51 K~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~~v  130 (401)
T 4ggo_A           51 KNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKAQV  130 (401)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHH
T ss_pred             CEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHHHH
Confidence            689999999999999999998 6799999999876533221         011 11122244788999999999888887


Q ss_pred             hc-------CCCEEEEeccccc
Q 039049           71 IQ-------GVDGVFHTASPVL   85 (305)
Q Consensus        71 ~~-------~~d~Vi~~a~~~~   85 (305)
                      ++       ++|++||++|...
T Consensus       131 i~~i~~~~G~IDiLVhS~A~~~  152 (401)
T 4ggo_A          131 IEEAKKKGIKFDLIVYSLASPV  152 (401)
T ss_dssp             HHHHHHTTCCEEEEEECCCCSE
T ss_pred             HHHHHHhcCCCCEEEEeccccc
Confidence            75       6799999999764

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.65  E-value=2.2e-07  Score=78.30  Aligned_cols=116  Identities=14%  Similarity=0.097  Sum_probs=78.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC--CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG--HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~   79 (305)
                      |||+|+||+|++|+.++..|+..|  .+|.++++++. ......+..... ..++....    ..++++++++++|+||+
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~-~~~a~dL~~~~~-~~~l~~~~----~t~d~~~a~~~aDvVvi   74 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHT-PGVAADLSHIET-RATVKGYL----GPEQLPDCLKGCDVVVI   74 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSH-HHHHHHHTTSSS-SCEEEEEE----SGGGHHHHHTTCSEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCcc-HHHHHHHhccCc-CceEEEec----CCCCHHHHhCCCCEEEE
Confidence            589999999999999999999888  78999998761 111112211110 00111111    12357778999999999


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEecc
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSS  125 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS  125 (305)
                      +|+..... . ....+.+..|+...+.+++.+.+...-.++|++|-
T Consensus        75 ~ag~~~~~-g-~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sN  118 (314)
T 1mld_A           75 PAGVPRKP-G-MTRDDLFNTNATIVATLTAACAQHCPDAMICIISN  118 (314)
T ss_dssp             CCSCCCCT-T-CCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CCCcCCCC-C-CcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence            99976533 2 22345789999999999999988732236777653

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.65  E-value=3.3e-07  Score=69.00  Aligned_cols=100  Identities=13%  Similarity=0.102  Sum_probs=69.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHH-hcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEA-IQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~Vi~~   80 (305)
                      ++|+|+|+ |.+|+.+++.|.+.|++|+++.|+++......   .    ..++..+.+|..+.+.+.++ ++++|+||.+
T Consensus        20 ~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~---~----~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~   91 (155)
T 2g1u_A           20 KYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLN---S----EFSGFTVVGDAAEFETLKECGMEKADMVFAF   91 (155)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSC---T----TCCSEEEESCTTSHHHHHTTTGGGCSEEEEC
T ss_pred             CcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHH---h----cCCCcEEEecCCCHHHHHHcCcccCCEEEEE
Confidence            58999996 99999999999999999999999876433211   0    11456777888887766665 6789999988


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccc
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSC  126 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~  126 (305)
                      .+...             .    ...+.+.++...+..++|...+.
T Consensus        92 ~~~~~-------------~----~~~~~~~~~~~~~~~~iv~~~~~  120 (155)
T 2g1u_A           92 TNDDS-------------T----NFFISMNARYMFNVENVIARVYD  120 (155)
T ss_dssp             SSCHH-------------H----HHHHHHHHHHTSCCSEEEEECSS
T ss_pred             eCCcH-------------H----HHHHHHHHHHHCCCCeEEEEECC
Confidence            65411             1    23444455652265666665543

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.64  E-value=4e-08  Score=83.27  Aligned_cols=115  Identities=18%  Similarity=0.083  Sum_probs=77.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC--e-----EEEEEeCCC--ccc-chhhhhhccCccCceEEEEccCCCcchHHHHh
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH--M-----VRTTVRDPE--DLS-KVGFLWELNGAEERLKIMKADLLMEGSFDEAI   71 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~--~-----V~~~~r~~~--~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~   71 (305)
                      +||+||||+|+||++++..|+..|.  +     +.++++++.  ... ....+...  ..+-.    .++...+...+.+
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~--~~~~~----~~~~~~~~~~~~~   77 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDC--ALPLL----KDVIATDKEEIAF   77 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHT--CCTTE----EEEEEESCHHHHT
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhh--hhccc----CCEEEcCCcHHHh
Confidence            4799999999999999999998774  5     888877532  111 11112111  00111    1222233466778


Q ss_pred             cCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCcc--EEEEecc
Q 039049           72 QGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVK--RVVLTSS  125 (305)
Q Consensus        72 ~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~v~~SS  125 (305)
                      +++|+||++||....+  .....+.++.|+..++.+++.+++. +.+  +++.+|-
T Consensus        78 ~daDvVvitAg~prkp--G~tR~dll~~N~~i~~~i~~~i~~~-~~~~~~vivvsN  130 (333)
T 5mdh_A           78 KDLDVAILVGSMPRRD--GMERKDLLKANVKIFKCQGAALDKY-AKKSVKVIVVGN  130 (333)
T ss_dssp             TTCSEEEECCSCCCCT--TCCTTTTHHHHHHHHHHHHHHHHHH-SCTTCEEEECSS
T ss_pred             CCCCEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEEcCC
Confidence            8999999999865432  2345568899999999999999998 544  5777664

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.60  E-value=1.1e-07  Score=84.27  Aligned_cols=108  Identities=14%  Similarity=0.186  Sum_probs=74.6

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHc-CCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDK-GHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFH   79 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~   79 (305)
                      |++|+|+|+ |++|+++++.|++. |++|++.+|+.++.....   ..    .++..+.+|+.|.+++.++++++|+|||
T Consensus        23 ~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la---~~----~~~~~~~~D~~d~~~l~~~l~~~DvVIn   94 (467)
T 2axq_A           23 GKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALA---KP----SGSKAISLDVTDDSALDKVLADNDVVIS   94 (467)
T ss_dssp             CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHH---GG----GTCEEEECCTTCHHHHHHHHHTSSEEEE
T ss_pred             CCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHH---Hh----cCCcEEEEecCCHHHHHHHHcCCCEEEE
Confidence            578999997 99999999999998 789999999865433221   11    1467788999998889999999999999


Q ss_pred             eccccccCCC----CchhhhhhhhhH--HHHHHHHHHHHhcCCc
Q 039049           80 TASPVLVPYD----NNIQATLIDPCI--KGTLNVLSSCKKAKSV  117 (305)
Q Consensus        80 ~a~~~~~~~~----~~~~~~~~~~n~--~~~~~l~~~~~~~~~~  117 (305)
                      +++......-    ......++..+.  ..+..+++.|+++ |+
T Consensus        95 ~tp~~~~~~v~~a~l~~g~~vvd~~~~~p~~~~Ll~~Ak~a-Gv  137 (467)
T 2axq_A           95 LIPYTFHPNVVKSAIRTKTDVVTSSYISPALRELEPEIVKA-GI  137 (467)
T ss_dssp             CSCGGGHHHHHHHHHHHTCEEEECSCCCHHHHHHHHHHHHH-TC
T ss_pred             CCchhhhHHHHHHHHhcCCEEEEeecCCHHHHHHHHHHHHc-CC
Confidence            9987531100    000011122222  3456777788877 65

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.55  E-value=2.2e-07  Score=73.90  Aligned_cols=75  Identities=19%  Similarity=0.191  Sum_probs=53.6

Q ss_pred             CCcEEEeCC----------------cchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCc
Q 039049            1 MPEYCVTGG----------------TGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME   64 (305)
Q Consensus         1 m~~ilItG~----------------~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~   64 (305)
                      .|+||||||                +|.+|.++++.|+.+|++|+++.|+......      .   ..++..+.  +...
T Consensus         3 gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~------~---~~~~~~~~--v~s~   71 (232)
T 2gk4_A            3 AMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPE------P---HPNLSIRE--ITNT   71 (232)
T ss_dssp             CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCC------C---CTTEEEEE--CCSH
T ss_pred             CCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc------C---CCCeEEEE--HhHH
Confidence            378999999                9999999999999999999999997542110      0   11344443  3343


Q ss_pred             ch----HHHHhcCCCEEEEecccccc
Q 039049           65 GS----FDEAIQGVDGVFHTASPVLV   86 (305)
Q Consensus        65 ~~----~~~~~~~~d~Vi~~a~~~~~   86 (305)
                      ++    +.+.+.++|++||+||....
T Consensus        72 ~em~~~v~~~~~~~Dili~aAAvsD~   97 (232)
T 2gk4_A           72 KDLLIEMQERVQDYQVLIHSMAVSDY   97 (232)
T ss_dssp             HHHHHHHHHHGGGCSEEEECSBCCSE
T ss_pred             HHHHHHHHHhcCCCCEEEEcCccccc
Confidence            33    33344579999999997653

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.55  E-value=6.3e-07  Score=67.30  Aligned_cols=76  Identities=17%  Similarity=0.249  Sum_probs=58.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHH-hcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEA-IQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~Vi~~   80 (305)
                      ++|+|+|+ |.+|+++++.|.+.|++|+++.+++..  ....+....  ..++.++.+|..+++.+.++ ++++|+||-+
T Consensus         4 ~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~--~~~~~~~~~--~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~   78 (153)
T 1id1_A            4 DHFIVCGH-SILAINTILQLNQRGQNVTVISNLPED--DIKQLEQRL--GDNADVIPGDSNDSSVLKKAGIDRCRAILAL   78 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHH--HHHHHHHHH--CTTCEEEESCTTSHHHHHHHTTTTCSEEEEC
T ss_pred             CcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChH--HHHHHHHhh--cCCCeEEEcCCCCHHHHHHcChhhCCEEEEe
Confidence            57999996 999999999999999999999987421  111111110  12578999999999988887 7899999977


Q ss_pred             cc
Q 039049           81 AS   82 (305)
Q Consensus        81 a~   82 (305)
                      .+
T Consensus        79 ~~   80 (153)
T 1id1_A           79 SD   80 (153)
T ss_dssp             SS
T ss_pred             cC
Confidence            54

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=98.46  E-value=1.1e-06  Score=70.24  Aligned_cols=72  Identities=18%  Similarity=0.151  Sum_probs=58.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHH-hcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEA-IQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~Vi~~   80 (305)
                      |+|+|+|+ |.+|+++++.|.+.|++|+++.++++......   ..    .++.++.+|..+.+.+.++ ++++|+||-+
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~---~~----~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~   72 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFA---KK----LKATIIHGDGSHKEILRDAEVSKNDVVVIL   72 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH---HH----SSSEEEESCTTSHHHHHHHTCCTTCEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHH---HH----cCCeEEEcCCCCHHHHHhcCcccCCEEEEe
Confidence            57999996 99999999999999999999998865433211   11    1568899999999988887 6789999966


Q ss_pred             c
Q 039049           81 A   81 (305)
Q Consensus        81 a   81 (305)
                      .
T Consensus        73 ~   73 (218)
T 3l4b_C           73 T   73 (218)
T ss_dssp             C
T ss_pred             c
Confidence            4

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.44  E-value=1.5e-06  Score=64.16  Aligned_cols=73  Identities=11%  Similarity=0.061  Sum_probs=58.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHH-hcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEA-IQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~Vi~~   80 (305)
                      ++|+|+|+ |.+|+.+++.|.+.|++|+++.++++.......        .++..+.+|..+++.+.++ ++++|+||-+
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~--------~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~   78 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE--------RGVRAVLGNAANEEIMQLAHLECAKWLILT   78 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH--------TTCEEEESCTTSHHHHHHTTGGGCSEEEEC
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH--------cCCCEEECCCCCHHHHHhcCcccCCEEEEE
Confidence            57999996 999999999999999999999998764332221        2678899999999888775 5688999977


Q ss_pred             ccc
Q 039049           81 ASP   83 (305)
Q Consensus        81 a~~   83 (305)
                      .+.
T Consensus        79 ~~~   81 (140)
T 3fwz_A           79 IPN   81 (140)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            543

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.39  E-value=1.5e-06  Score=67.30  Aligned_cols=72  Identities=14%  Similarity=0.114  Sum_probs=57.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHc-CCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHH--hcCCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDK-GHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEA--IQGVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~--~~~~d~Vi   78 (305)
                      ++|+|+|+ |.+|+.+++.|.+. |++|+++.|+++......   .     .++..+.+|..+.+.+.++  ++++|+||
T Consensus        40 ~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~---~-----~g~~~~~gd~~~~~~l~~~~~~~~ad~vi  110 (183)
T 3c85_A           40 AQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHR---S-----EGRNVISGDATDPDFWERILDTGHVKLVL  110 (183)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH---H-----TTCCEEECCTTCHHHHHTBCSCCCCCEEE
T ss_pred             CcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH---H-----CCCCEEEcCCCCHHHHHhccCCCCCCEEE
Confidence            47999995 99999999999999 999999999875432221   1     1567888999998877776  77899999


Q ss_pred             Eecc
Q 039049           79 HTAS   82 (305)
Q Consensus        79 ~~a~   82 (305)
                      .+.+
T Consensus       111 ~~~~  114 (183)
T 3c85_A          111 LAMP  114 (183)
T ss_dssp             ECCS
T ss_pred             EeCC
Confidence            8754

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.39  E-value=1e-06  Score=69.95  Aligned_cols=71  Identities=17%  Similarity=0.178  Sum_probs=52.4

Q ss_pred             CcEEEeCC----------------cchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcc
Q 039049            2 PEYCVTGG----------------TGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG   65 (305)
Q Consensus         2 ~~ilItG~----------------~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~   65 (305)
                      ++||||||                +|.+|.++++.|+++|++|+++.++.. ...       +   .++.  ..|+.+.+
T Consensus         9 k~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~~-------~---~g~~--~~dv~~~~   75 (226)
T 1u7z_A            9 LNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LPT-------P---PFVK--RVDVMTAL   75 (226)
T ss_dssp             CEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CCC-------C---TTEE--EEECCSHH
T ss_pred             CEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-ccc-------C---CCCe--EEccCcHH
Confidence            68999999                699999999999999999999987642 110       1   1232  45777655


Q ss_pred             hHHHH----hcCCCEEEEeccccc
Q 039049           66 SFDEA----IQGVDGVFHTASPVL   85 (305)
Q Consensus        66 ~~~~~----~~~~d~Vi~~a~~~~   85 (305)
                      ++.+.    +.++|++||+||...
T Consensus        76 ~~~~~v~~~~~~~Dili~~Aav~d   99 (226)
T 1u7z_A           76 EMEAAVNASVQQQNIFIGCAAVAD   99 (226)
T ss_dssp             HHHHHHHHHGGGCSEEEECCBCCS
T ss_pred             HHHHHHHHhcCCCCEEEECCcccC
Confidence            44433    347899999999764

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=98.30  E-value=3.1e-06  Score=71.83  Aligned_cols=114  Identities=10%  Similarity=0.049  Sum_probs=74.5

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcC--CeEEEEEeCCCcccc-hhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKG--HMVRTTVRDPEDLSK-VGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGV   77 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~V   77 (305)
                      |+||.|+|++|++|++++..++..|  .+|.+++++..+... ...+.....  +.     .++.-..+..+.++++|+|
T Consensus         8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~--~~-----~~i~~t~d~~~al~dADvV   80 (343)
T 3fi9_A            8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGF--EG-----LNLTFTSDIKEALTDAKYI   80 (343)
T ss_dssp             SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCC--TT-----CCCEEESCHHHHHTTEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcC--CC-----CceEEcCCHHHHhCCCCEE
Confidence            4689999999999999999999988  489999876543221 111222110  00     1222123566778999999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCcc--EEEEec
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVK--RVVLTS  124 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~v~~S  124 (305)
                      |.+||.....  .....+.+..|+...+.+.+.+.+. ..+  .++.+|
T Consensus        81 vitaG~p~kp--G~~R~dLl~~N~~I~~~i~~~i~~~-~p~a~~vlvvs  126 (343)
T 3fi9_A           81 VSSGGAPRKE--GMTREDLLKGNAEIAAQLGKDIKSY-CPDCKHVIIIF  126 (343)
T ss_dssp             EECCC---------CHHHHHHHHHHHHHHHHHHHHHH-CTTCCEEEECS
T ss_pred             EEccCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHh-ccCcEEEEEec
Confidence            9999875432  2334557899999999999999887 433  345555

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.25  E-value=9.9e-07  Score=69.22  Aligned_cols=72  Identities=19%  Similarity=0.135  Sum_probs=49.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHH---hc--CCCE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEA---IQ--GVDG   76 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~---~~--~~d~   76 (305)
                      ++|+|+||+|.||..+++.+...|.+|++++|+++.....   ...     +... ..|..+.+..+.+   ..  ++|+
T Consensus        40 ~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~---~~~-----g~~~-~~d~~~~~~~~~~~~~~~~~~~D~  110 (198)
T 1pqw_A           40 ERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML---SRL-----GVEY-VGDSRSVDFADEILELTDGYGVDV  110 (198)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH---HTT-----CCSE-EEETTCSTHHHHHHHHTTTCCEEE
T ss_pred             CEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH---HHc-----CCCE-EeeCCcHHHHHHHHHHhCCCCCeE
Confidence            5799999999999999999999999999999875433221   111     1111 2366554433333   32  5899


Q ss_pred             EEEecc
Q 039049           77 VFHTAS   82 (305)
Q Consensus        77 Vi~~a~   82 (305)
                      ||++++
T Consensus       111 vi~~~g  116 (198)
T 1pqw_A          111 VLNSLA  116 (198)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999986

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=98.16  E-value=4.1e-06  Score=67.54  Aligned_cols=69  Identities=9%  Similarity=0.068  Sum_probs=56.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHH-hcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEA-IQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~Vi~~   80 (305)
                      ++|+|+|+ |.+|+.+++.|.+.|+ |+++.++++.....   .      .++.++.+|..+++.+.++ ++++|.||.+
T Consensus        10 ~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~---~------~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~   78 (234)
T 2aef_A           10 RHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVL---R------SGANFVHGDPTRVSDLEKANVRGARAVIVD   78 (234)
T ss_dssp             CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHH---H------TTCEEEESCTTCHHHHHHTTCTTCSEEEEC
T ss_pred             CEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHH---h------cCCeEEEcCCCCHHHHHhcCcchhcEEEEc
Confidence            57999997 9999999999999999 99998776532211   1      2678999999999988877 7899999976


Q ss_pred             c
Q 039049           81 A   81 (305)
Q Consensus        81 a   81 (305)
                      .
T Consensus        79 ~   79 (234)
T 2aef_A           79 L   79 (234)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=98.09  E-value=2.4e-05  Score=65.95  Aligned_cols=113  Identities=17%  Similarity=0.118  Sum_probs=74.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC--eEEEEEeCCCcccc-hhhhhhc-cCccCceEEEEccCCCcchHHHHhcCCCEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH--MVRTTVRDPEDLSK-VGFLWEL-NGAEERLKIMKADLLMEGSFDEAIQGVDGV   77 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~-~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~d~V   77 (305)
                      +||.|+|+ |.+|+.++..|+..|.  +|.++++++++... ...+... +....++.....|   .    +.++++|+|
T Consensus         6 ~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~----~a~~~aDvV   77 (326)
T 3pqe_A            6 NKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---Y----EDCKDADIV   77 (326)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---G----GGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---H----HHhCCCCEE
Confidence            68999996 9999999999999986  89999886543321 1112221 1111233433332   1    357789999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEec
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS  124 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  124 (305)
                      |.+||....+  .....+.+..|+...+.+.+.+.+...-..++.+|
T Consensus        78 vi~ag~p~kp--G~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvt  122 (326)
T 3pqe_A           78 CICAGANQKP--GETRLELVEKNLKIFKGIVSEVMASGFDGIFLVAT  122 (326)
T ss_dssp             EECCSCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEecccCCCC--CccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcC
Confidence            9999875432  23345578999999999999998873222455555

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=98.07  E-value=1.4e-05  Score=67.29  Aligned_cols=114  Identities=13%  Similarity=0.065  Sum_probs=64.6

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCC--eEEEEEeCCCcccc-hhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGH--MVRTTVRDPEDLSK-VGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGV   77 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~V   77 (305)
                      ++||.|+|+ |.+|++++..|+..|.  ++.++++++.+... ...+........++.....|   .    +.++++|+|
T Consensus         9 ~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~---~----~a~~~aDiV   80 (326)
T 3vku_A            9 HQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE---Y----SDAKDADLV   80 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC---G----GGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc---H----HHhcCCCEE
Confidence            368999996 9999999999999886  89999886543221 11111111111133333322   2    347789999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEec
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS  124 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  124 (305)
                      |.+||....+  .....+.++.|+...+.+.+.+.+...-..++.+|
T Consensus        81 vi~ag~~~kp--G~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt  125 (326)
T 3vku_A           81 VITAGAPQKP--GETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             EECCCCC------------------CHHHHHHHHHTTTCCSEEEECS
T ss_pred             EECCCCCCCC--CchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence            9999975422  22345578999999999999998873222455544

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=98.07  E-value=1.2e-05  Score=68.40  Aligned_cols=98  Identities=12%  Similarity=0.133  Sum_probs=59.2

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcC-----C-eEEEEEeCCCcccchhhhh-hccCccCceEEEEccCCCcchHHHHhcC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKG-----H-MVRTTVRDPEDLSKVGFLW-ELNGAEERLKIMKADLLMEGSFDEAIQG   73 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g-----~-~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~D~~d~~~~~~~~~~   73 (305)
                      |+||+|.||||++|+.|++.|++.+     + +++++.+..+......... .+.. ...+.+.  |+ +.    +.+.+
T Consensus         9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~-~~~~~~~--~~-~~----~~~~~   80 (352)
T 2nqt_A            9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTP-LAHRVVE--PT-EA----AVLGG   80 (352)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGG-GTTCBCE--EC-CH----HHHTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccc-cceeeec--cC-CH----HHhcC
Confidence            4689999999999999999999877     4 7888765432111111100 0000 0011221  21 22    23558


Q ss_pred             CCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccce
Q 039049           74 VDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCS  127 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  127 (305)
                      +|+||.|.+...                  +..++..+ +. | .++|-+|+..
T Consensus        81 ~DvVf~alg~~~------------------s~~~~~~~-~~-G-~~vIDlSa~~  113 (352)
T 2nqt_A           81 HDAVFLALPHGH------------------SAVLAQQL-SP-E-TLIIDCGADF  113 (352)
T ss_dssp             CSEEEECCTTSC------------------CHHHHHHS-CT-T-SEEEECSSTT
T ss_pred             CCEEEECCCCcc------------------hHHHHHHH-hC-C-CEEEEECCCc
Confidence            999999887643                  33555666 65 6 4788888865

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=98.05  E-value=2.2e-06  Score=67.99  Aligned_cols=74  Identities=19%  Similarity=0.140  Sum_probs=50.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      |+|+|+||+|.+|+++++.|++.|++|++++|++++..........     .+.  ..|+. .+++.++++++|+||++.
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-----~~~--~~~~~-~~~~~~~~~~~D~Vi~~~   72 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRR-----IAG--DASIT-GMKNEDAAEACDIAVLTI   72 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHH-----HHS--SCCEE-EEEHHHHHHHCSEEEECS
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc-----ccc--cCCCC-hhhHHHHHhcCCEEEEeC
Confidence            5799999999999999999999999999999986543222110000     000  01222 234666777899999987


Q ss_pred             cc
Q 039049           82 SP   83 (305)
Q Consensus        82 ~~   83 (305)
                      ..
T Consensus        73 ~~   74 (212)
T 1jay_A           73 PW   74 (212)
T ss_dssp             CH
T ss_pred             Ch
Confidence            53

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.00  E-value=1.5e-05  Score=66.87  Aligned_cols=83  Identities=11%  Similarity=-0.005  Sum_probs=57.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ++++|+|+ |.+|+.++..|++.|. +|++.+|+++..++...+.........+.+...++.+.+.+.+.+.++|+|||+
T Consensus       155 k~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiIINa  233 (315)
T 3tnl_A          155 KKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTNA  233 (315)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEEEC
T ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEEEEC
Confidence            68999997 8999999999999998 899999984322232222211100012334445666666677888899999999


Q ss_pred             ccccc
Q 039049           81 ASPVL   85 (305)
Q Consensus        81 a~~~~   85 (305)
                      .....
T Consensus       234 Tp~Gm  238 (315)
T 3tnl_A          234 TGVGM  238 (315)
T ss_dssp             SSTTS
T ss_pred             ccCCC
Confidence            87653

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=97.99  E-value=7.5e-06  Score=68.82  Aligned_cols=115  Identities=14%  Similarity=0.077  Sum_probs=70.6

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccch-hhhhhcc-CccCceEEEEccCCCcchHHHHhcCCCEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKV-GFLWELN-GAEERLKIMKADLLMEGSFDEAIQGVDGV   77 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~-~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~d~V   77 (305)
                      |+||.|+|+ |.+|..++..|+..|+ +|.++++++++.... ..+.... .......+..     ..++ +.++++|+|
T Consensus         2 ~~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~-----t~d~-~a~~~aD~V   74 (309)
T 1ur5_A            2 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTG-----TNNY-ADTANSDVI   74 (309)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE-----ESCG-GGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEE-----CCCH-HHHCCCCEE
Confidence            368999998 9999999999999997 888888876543321 1111100 0000111111     0123 447899999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEecc
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSS  125 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS  125 (305)
                      |.+++.....  .....+....|+...+.+.+.+.+. ....+|.+.|
T Consensus        75 i~a~g~p~~~--g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~vi~~t  119 (309)
T 1ur5_A           75 VVTSGAPRKP--GMSREDLIKVNADITRACISQAAPL-SPNAVIIMVN  119 (309)
T ss_dssp             EECCCC----------CHHHHHHHHHHHHHHHHHGGG-CTTCEEEECC
T ss_pred             EEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEcC
Confidence            9999875432  1122346788888899999999887 5454554444

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.94  E-value=1e-05  Score=68.69  Aligned_cols=72  Identities=10%  Similarity=-0.003  Sum_probs=50.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHH---hc--CCCE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEA---IQ--GVDG   76 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~---~~--~~d~   76 (305)
                      ++|+|+||+|.||..+++.+...|.+|++++|++++......+        +... ..|..+.+..+++   ..  ++|+
T Consensus       142 ~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~--------g~~~-~~~~~~~~~~~~~~~~~~~~~~D~  212 (327)
T 1qor_A          142 EQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKA--------GAWQ-VINYREEDLVERLKEITGGKKVRV  212 (327)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH--------TCSE-EEETTTSCHHHHHHHHTTTCCEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc--------CCCE-EEECCCccHHHHHHHHhCCCCceE
Confidence            5799999999999999999999999999999876543322211        1111 2355554433333   22  5899


Q ss_pred             EEEecc
Q 039049           77 VFHTAS   82 (305)
Q Consensus        77 Vi~~a~   82 (305)
                      ||+++|
T Consensus       213 vi~~~g  218 (327)
T 1qor_A          213 VYDSVG  218 (327)
T ss_dssp             EEECSC
T ss_pred             EEECCc
Confidence            999998

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=97.92  E-value=4.6e-05  Score=64.59  Aligned_cols=105  Identities=18%  Similarity=0.074  Sum_probs=70.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccc-hhhhhhc-c--CccCceEEEEccCCCcchHHHHhcCCCE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSK-VGFLWEL-N--GAEERLKIMKADLLMEGSFDEAIQGVDG   76 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~-~~~~~~~-~--~~~~~~~~~~~D~~d~~~~~~~~~~~d~   76 (305)
                      |||.|+|| |.+|..++..|+..|+ +|.+++++++.... ...+... .  ....++..       ..++.+.++++|+
T Consensus        10 ~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-------t~d~~ea~~~aDi   81 (331)
T 1pzg_A           10 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-------EYSYEAALTGADC   81 (331)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-------ECSHHHHHTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-------eCCHHHHhCCCCE
Confidence            58999998 9999999999999998 99999988764433 1111111 0  00111111       2346667889999


Q ss_pred             EEEeccccccCCCCc---hhhhhhhhhHHHHHHHHHHHHhc
Q 039049           77 VFHTASPVLVPYDNN---IQATLIDPCIKGTLNVLSSCKKA  114 (305)
Q Consensus        77 Vi~~a~~~~~~~~~~---~~~~~~~~n~~~~~~l~~~~~~~  114 (305)
                      ||-+++.........   ........|+...+.+++.+.+.
T Consensus        82 Vi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~  122 (331)
T 1pzg_A           82 VIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKY  122 (331)
T ss_dssp             EEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred             EEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            999998654221100   23446788888899999998887

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.92  E-value=3.8e-05  Score=67.12  Aligned_cols=72  Identities=14%  Similarity=0.159  Sum_probs=59.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHH-hcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEA-IQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~Vi~~   80 (305)
                      ++|+|+|. |-+|+.+++.|.+.|++|+++.++++.......        .++.++.+|.++++.+.++ ++++|+||-+
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~--------~g~~vi~GDat~~~~L~~agi~~A~~viv~   75 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK--------FGMKVFYGDATRMDLLESAGAAKAEVLINA   75 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH--------TTCCCEESCTTCHHHHHHTTTTTCSEEEEC
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh--------CCCeEEEcCCCCHHHHHhcCCCccCEEEEC
Confidence            57999996 999999999999999999999998764333221        2678899999999988887 7789999976


Q ss_pred             cc
Q 039049           81 AS   82 (305)
Q Consensus        81 a~   82 (305)
                      ..
T Consensus        76 ~~   77 (413)
T 3l9w_A           76 ID   77 (413)
T ss_dssp             CS
T ss_pred             CC
Confidence            53

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.91  E-value=6.5e-05  Score=62.38  Aligned_cols=114  Identities=11%  Similarity=0.019  Sum_probs=75.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC--eEEEEEeCCCcccc-hhhhhhcc-CccCceEEEEccCCCcchHHHHhcCCCEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH--MVRTTVRDPEDLSK-VGFLWELN-GAEERLKIMKADLLMEGSFDEAIQGVDGV   77 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~-~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~d~V   77 (305)
                      |||.|+|+ |.+|..++..|+..|+  +|.+++++++.... ...+.... .......+...  .|    .+.++++|+|
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d----~~a~~~aDiV   73 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--AD----YSLLKGSEII   73 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SC----GGGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CC----HHHhCCCCEE
Confidence            57999998 9999999999999997  89999988754321 11111110 00112222211  12    3457899999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEec
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS  124 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  124 (305)
                      |.+|+....+  .....+.+..|+...+.+.+.+.+...-..++.+|
T Consensus        74 Viaag~~~kp--G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs  118 (294)
T 1oju_A           74 VVTAGLARKP--GMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (294)
T ss_dssp             EECCCCCCCS--SCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             EECCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            9999875432  22345578999999999999998873223555555

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=97.90  E-value=0.0001  Score=62.06  Aligned_cols=112  Identities=12%  Similarity=0.012  Sum_probs=69.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC--eEEEEEeCCCcccc-hhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH--MVRTTVRDPEDLSK-VGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      +||.|+|+ |.+|..++-.|+..|.  +|.++++++++... ...+........++.+. .  .+    .+.++++|+||
T Consensus         8 ~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~----~~a~~~aDvVi   79 (318)
T 1y6j_A            8 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GD----YSDVKDCDVIV   79 (318)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C----GGGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CC----HHHhCCCCEEE
Confidence            58999998 9999999999999887  89999988654432 11221111111122222 1  12    23478999999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEe
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLT  123 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  123 (305)
                      .+++.....  .....+....|+.....+.+.+.+...-..+|.+
T Consensus        80 i~~g~p~k~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~  122 (318)
T 1y6j_A           80 VTAGANRKP--GETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVV  122 (318)
T ss_dssp             ECCCC--------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEC
T ss_pred             EcCCCCCCC--CcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEe
Confidence            999875422  1223457899999999999999886222244443

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.89  E-value=0.00012  Score=61.57  Aligned_cols=115  Identities=20%  Similarity=0.038  Sum_probs=73.3

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccc-hhhhhhccC-ccCceEEEEccCCCcchHHHHhcCCCEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSK-VGFLWELNG-AEERLKIMKADLLMEGSFDEAIQGVDGV   77 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~-~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~V   77 (305)
                      |+||.|+|+ |.+|..++..|+..|+ +|.++++++++... ...+..... ......+...  .|   . +.++++|+|
T Consensus         7 ~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t--~d---~-~a~~~aDiV   79 (324)
T 3gvi_A            7 RNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGA--ND---Y-AAIEGADVV   79 (324)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE--SS---G-GGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEe--CC---H-HHHCCCCEE
Confidence            368999998 9999999999999998 99999998765321 111111100 0001122211  12   2 467899999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEec
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS  124 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  124 (305)
                      |.+|+.....  .....+.+..|+...+.+.+.+.+...-..++.+|
T Consensus        80 Iiaag~p~k~--G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvt  124 (324)
T 3gvi_A           80 IVTAGVPRKP--GMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICIT  124 (324)
T ss_dssp             EECCSCCCC-------CHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEccCcCCCC--CCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecC
Confidence            9999865432  22344577889999999999998873222555555

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=97.89  E-value=0.00011  Score=61.63  Aligned_cols=115  Identities=17%  Similarity=0.107  Sum_probs=74.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHc-C--CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDK-G--HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~-g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      |||.|+||+|.+|.+++..|... +  .++.++++++ ...  .....+.+.......... ..  +...+.++++|+||
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~--G~a~Dl~~~~~~~~v~~~-~~--~~~~~~~~~aDivi   74 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTP--GVAVDLSHIPTAVKIKGF-SG--EDATPALEGADVVL   74 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THH--HHHHHHHTSCSSEEEEEE-CS--SCCHHHHTTCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-Cch--hHHHHhhCCCCCceEEEe-cC--CCcHHHhCCCCEEE
Confidence            57999999999999999999875 5  4888888876 221  111112221112222111 00  12346688999999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEec
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS  124 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  124 (305)
                      -+||....+  .....+.++.|+...+.+.+.+.+...-..++.+|
T Consensus        75 i~ag~~rkp--G~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvt  118 (312)
T 3hhp_A           75 ISAGVARKP--GMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT  118 (312)
T ss_dssp             ECCSCSCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             EeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEec
Confidence            999875432  23455688999999999999998873222555555

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=97.88  E-value=2.6e-05  Score=66.73  Aligned_cols=73  Identities=15%  Similarity=0.100  Sum_probs=51.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-----CCCE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-----GVDG   76 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----~~d~   76 (305)
                      ++|||+||+|.||..+++.+...|.+|+++.|++++......+        +... ..|..+.+++.+.+.     ++|+
T Consensus       171 ~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~--------g~~~-~~d~~~~~~~~~~~~~~~~~~~D~  241 (347)
T 2hcy_A          171 HWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSI--------GGEV-FIDFTKEKDIVGAVLKATDGGAHG  241 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHT--------TCCE-EEETTTCSCHHHHHHHHHTSCEEE
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHc--------CCce-EEecCccHhHHHHHHHHhCCCCCE
Confidence            5799999999999999999999999999999987644322211        1121 236664444444332     6899


Q ss_pred             EEEeccc
Q 039049           77 VFHTASP   83 (305)
Q Consensus        77 Vi~~a~~   83 (305)
                      ||++++.
T Consensus       242 vi~~~g~  248 (347)
T 2hcy_A          242 VINVSVS  248 (347)
T ss_dssp             EEECSSC
T ss_pred             EEECCCc
Confidence            9999874

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.86  E-value=1.2e-05  Score=69.49  Aligned_cols=74  Identities=18%  Similarity=0.223  Sum_probs=55.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      ++|+|+|+ |.||+.+++.|...|.+|++++|++++.....   ....  ..   +.+|..+.+.+.+++.++|+||+++
T Consensus       167 ~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~---~~~g--~~---~~~~~~~~~~l~~~~~~~DvVi~~~  237 (369)
T 2eez_A          167 ASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLD---DVFG--GR---VITLTATEANIKKSVQHADLLIGAV  237 (369)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---HHTT--TS---EEEEECCHHHHHHHHHHCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH---HhcC--ce---EEEecCCHHHHHHHHhCCCEEEECC
Confidence            68999999 99999999999999999999999865432221   1111  11   4456677778888888999999999


Q ss_pred             ccc
Q 039049           82 SPV   84 (305)
Q Consensus        82 ~~~   84 (305)
                      +..
T Consensus       238 g~~  240 (369)
T 2eez_A          238 LVP  240 (369)
T ss_dssp             C--
T ss_pred             CCC
Confidence            864

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=97.85  E-value=4.9e-05  Score=64.76  Aligned_cols=98  Identities=9%  Similarity=0.061  Sum_probs=58.3

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFH   79 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~   79 (305)
                      |+||.|.||+|++|+.+++.|.+.+. +++++.+..+...+....   .....+..  ...+.+.+   + +.++|+||.
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~---~~~~~g~~--~~~~~~~~---~-~~~vDvV~~   74 (345)
T 2ozp_A            4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFV---HPNLRGRT--NLKFVPPE---K-LEPADILVL   74 (345)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGT---CGGGTTTC--CCBCBCGG---G-CCCCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHh---CchhcCcc--cccccchh---H-hcCCCEEEE
Confidence            35899999999999999999987764 888877643322111111   00000000  01112222   2 468999999


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccce
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCS  127 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  127 (305)
                      +.+...                  ...++..+.++ |+ ++|-+|+..
T Consensus        75 a~g~~~------------------s~~~a~~~~~a-G~-~VId~Sa~~  102 (345)
T 2ozp_A           75 ALPHGV------------------FAREFDRYSAL-AP-VLVDLSADF  102 (345)
T ss_dssp             CCCTTH------------------HHHTHHHHHTT-CS-EEEECSSTT
T ss_pred             cCCcHH------------------HHHHHHHHHHC-CC-EEEEcCccc
Confidence            876643                  33445555666 75 688888853

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.84  E-value=1.9e-05  Score=67.11  Aligned_cols=73  Identities=18%  Similarity=0.119  Sum_probs=50.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcch---HHHHhc--CCCE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGS---FDEAIQ--GVDG   76 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~---~~~~~~--~~d~   76 (305)
                      ++|+|+||+|.||..+++.+...|.+|++++|++++......+        +... ..|..+.+.   +.+...  ++|+
T Consensus       147 ~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~--------g~~~-~~d~~~~~~~~~i~~~~~~~~~d~  217 (333)
T 1wly_A          147 DYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKL--------GCHH-TINYSTQDFAEVVREITGGKGVDV  217 (333)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH--------TCSE-EEETTTSCHHHHHHHHHTTCCEEE
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc--------CCCE-EEECCCHHHHHHHHHHhCCCCCeE
Confidence            5799999999999999999999999999999986433322111        1111 235555433   333332  6899


Q ss_pred             EEEeccc
Q 039049           77 VFHTASP   83 (305)
Q Consensus        77 Vi~~a~~   83 (305)
                      ||+++|.
T Consensus       218 vi~~~g~  224 (333)
T 1wly_A          218 VYDSIGK  224 (333)
T ss_dssp             EEECSCT
T ss_pred             EEECCcH
Confidence            9999985

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=97.83  E-value=8.9e-05  Score=62.66  Aligned_cols=102  Identities=17%  Similarity=0.105  Sum_probs=58.5

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHc-CCeEEEEEeCC---CcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDK-GHMVRTTVRDP---EDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDG   76 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~-g~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   76 (305)
                      |+||.|+||||++|+.|++.|.+. ++++..+.++.   +................++.+...  .+.+   ++++++|+
T Consensus         4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~--~~~~---~~~~~~Dv   78 (337)
T 3dr3_A            4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPM--SDIS---EFSPGVDV   78 (337)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEE--SSGG---GTCTTCSE
T ss_pred             ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEecc--CCHH---HHhcCCCE
Confidence            789999999999999999999884 46888776544   211111111000000002222221  0122   22368999


Q ss_pred             EEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccce
Q 039049           77 VFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCS  127 (305)
Q Consensus        77 Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  127 (305)
                      ||-|.+...                  +..+...+.+. |+ ++|=+|+..
T Consensus        79 vf~a~p~~~------------------s~~~~~~~~~~-g~-~vIDlSa~f  109 (337)
T 3dr3_A           79 VFLATAHEV------------------SHDLAPQFLEA-GC-VVFDLSGAF  109 (337)
T ss_dssp             EEECSCHHH------------------HHHHHHHHHHT-TC-EEEECSSTT
T ss_pred             EEECCChHH------------------HHHHHHHHHHC-CC-EEEEcCCcc
Confidence            997765432                  33445555566 65 688888764

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=97.82  E-value=6.6e-05  Score=63.80  Aligned_cols=93  Identities=17%  Similarity=0.195  Sum_probs=55.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC---eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH---MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      ++|+|.||+|++|+.+++.|.++++   +++++...........    ..+  ..+.+.  |. +++.    +.++|+||
T Consensus         7 ~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~----~~g--~~i~~~--~~-~~~~----~~~~DvV~   73 (340)
T 2hjs_A            7 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMG----FAE--SSLRVG--DV-DSFD----FSSVGLAF   73 (340)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEE----ETT--EEEECE--EG-GGCC----GGGCSEEE
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccc----cCC--cceEEe--cC-CHHH----hcCCCEEE
Confidence            6899999999999999999997664   5566543211100000    000  012221  22 2222    45899999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccce
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCS  127 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  127 (305)
                      -+.+...                  ...++..+.+. |++ +|.+|+..
T Consensus        74 ~a~g~~~------------------s~~~a~~~~~a-G~k-vId~Sa~~  102 (340)
T 2hjs_A           74 FAAAAEV------------------SRAHAERARAA-GCS-VIDLSGAL  102 (340)
T ss_dssp             ECSCHHH------------------HHHHHHHHHHT-TCE-EEETTCTT
T ss_pred             EcCCcHH------------------HHHHHHHHHHC-CCE-EEEeCCCC
Confidence            8876532                  34556666677 764 78888764

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.81  E-value=3.1e-05  Score=66.47  Aligned_cols=73  Identities=11%  Similarity=0.051  Sum_probs=50.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHH---HHhc--CCCE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFD---EAIQ--GVDG   76 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~---~~~~--~~d~   76 (305)
                      ++|+|+||+|.||..+++.+...|.+|++++|++++......+        +.. ...|..+.+..+   +...  ++|+
T Consensus       164 ~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~--------g~~-~~~~~~~~~~~~~~~~~~~~~~~d~  234 (354)
T 2j8z_A          164 DYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKL--------GAA-AGFNYKKEDFSEATLKFTKGAGVNL  234 (354)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH--------TCS-EEEETTTSCHHHHHHHHTTTSCEEE
T ss_pred             CEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc--------CCc-EEEecCChHHHHHHHHHhcCCCceE
Confidence            5799999999999999999999999999999876543322111        111 123554443333   3332  6899


Q ss_pred             EEEeccc
Q 039049           77 VFHTASP   83 (305)
Q Consensus        77 Vi~~a~~   83 (305)
                      ||+++|.
T Consensus       235 vi~~~G~  241 (354)
T 2j8z_A          235 ILDCIGG  241 (354)
T ss_dssp             EEESSCG
T ss_pred             EEECCCc
Confidence            9999985

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=97.80  E-value=2.5e-05  Score=66.45  Aligned_cols=73  Identities=16%  Similarity=0.196  Sum_probs=50.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHh-----cCCCE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAI-----QGVDG   76 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-----~~~d~   76 (305)
                      ++|+|+||+|.||..+++.+...|.+|++++|++++......+        +.. ...|..+.+++.+.+     .++|+
T Consensus       147 ~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~--------g~~-~~~d~~~~~~~~~~~~~~~~~~~d~  217 (333)
T 1v3u_A          147 ETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQI--------GFD-AAFNYKTVNSLEEALKKASPDGYDC  217 (333)
T ss_dssp             CEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT--------TCS-EEEETTSCSCHHHHHHHHCTTCEEE
T ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc--------CCc-EEEecCCHHHHHHHHHHHhCCCCeE
Confidence            5799999999999999999999999999999876533222111        111 224666533343333     25899


Q ss_pred             EEEeccc
Q 039049           77 VFHTASP   83 (305)
Q Consensus        77 Vi~~a~~   83 (305)
                      ||+++|.
T Consensus       218 vi~~~g~  224 (333)
T 1v3u_A          218 YFDNVGG  224 (333)
T ss_dssp             EEESSCH
T ss_pred             EEECCCh
Confidence            9999974

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.79  E-value=0.00028  Score=59.40  Aligned_cols=114  Identities=18%  Similarity=0.006  Sum_probs=74.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccc-hhhhhhcc-CccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSK-VGFLWELN-GAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~-~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      +||.|+|+ |.+|..++..|+..|. +|.++++++++... ...+.... .......+...  .|.    +.++++|+||
T Consensus         6 ~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d~----~a~~~aDvVI   78 (321)
T 3p7m_A            6 KKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--NDY----KDLENSDVVI   78 (321)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCG----GGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CCH----HHHCCCCEEE
Confidence            68999995 9999999999999888 99999988765321 11121110 00011222211  122    4678899999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEec
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS  124 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  124 (305)
                      .+|+....+  .....+.+..|+...+.+++.+.+...-..++.+|
T Consensus        79 i~ag~p~k~--G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  122 (321)
T 3p7m_A           79 VTAGVPRKP--GMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT  122 (321)
T ss_dssp             ECCSCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EcCCcCCCC--CCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            999875432  22345578899999999999998873222555554

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.78  E-value=0.00014  Score=61.45  Aligned_cols=115  Identities=13%  Similarity=0.006  Sum_probs=74.9

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCC--eEEEEEeCCCcccc-hhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGH--MVRTTVRDPEDLSK-VGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGV   77 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~V   77 (305)
                      ++||.|+|+ |.+|..++..|+..|.  +|.+++++..+... ...+............+..  .|++    .++++|+|
T Consensus        19 ~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~~----~~~~aDiV   91 (331)
T 4aj2_A           19 QNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDYS----VTANSKLV   91 (331)
T ss_dssp             SSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSGG----GGTTEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCHH----HhCCCCEE
Confidence            368999997 9999999999999886  89999886543221 1112211101111122222  1222    47889999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEec
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS  124 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  124 (305)
                      |.+||....+  .....+.++.|+...+.+.+.+.+...-..++.+|
T Consensus        92 vi~aG~~~kp--G~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvt  136 (331)
T 4aj2_A           92 IITAGARQQE--GESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVS  136 (331)
T ss_dssp             EECCSCCCCT--TCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEccCCCCCC--CccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            9999875432  23345688999999999999998873223555555

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.78  E-value=4.5e-05  Score=67.70  Aligned_cols=70  Identities=17%  Similarity=0.267  Sum_probs=57.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHH-hcCCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEA-IQGVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~Vi~   79 (305)
                      |+|+|.|+ |-+|++|++.|.+.||+|+++.++++....   +...    -++..+.||.++++.++++ ++++|++|-
T Consensus         4 M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~---~~~~----~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia   74 (461)
T 4g65_A            4 MKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRE---LQDK----YDLRVVNGHASHPDVLHEAGAQDADMLVA   74 (461)
T ss_dssp             EEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHH---HHHH----SSCEEEESCTTCHHHHHHHTTTTCSEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHH---HHHh----cCcEEEEEcCCCHHHHHhcCCCcCCEEEE
Confidence            78999997 999999999999999999999887654332   2111    1578899999999998887 578999883

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.77  E-value=0.00021  Score=59.89  Aligned_cols=114  Identities=11%  Similarity=-0.008  Sum_probs=71.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC--eEEEEEeCCCcccc-hhhhhhc-cCccCceEEEEccCCCcchHHHHhcCCCEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH--MVRTTVRDPEDLSK-VGFLWEL-NGAEERLKIMKADLLMEGSFDEAIQGVDGV   77 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~-~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~d~V   77 (305)
                      |||.|+|+ |.+|+.++..|+..|.  +|.++++++.+... ...+... +....+......|  +.    +.++++|+|
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~~----~a~~~aDvV   73 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--DY----GPTEDSDVC   73 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--SS----GGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--CH----HHhCCCCEE
Confidence            57999996 9999999999999886  89999998764331 1111111 0000122222112  22    357789999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEec
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS  124 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  124 (305)
                      |.+||....+  .....+.++.|+...+.+.+.+.+...-..++.+|
T Consensus        74 ii~ag~~~kp--G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  118 (314)
T 3nep_X           74 IITAGLPRSP--GMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVA  118 (314)
T ss_dssp             EECCCC---------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECC
T ss_pred             EECCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecC
Confidence            9999875432  22345578999999999999998873222455555

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=97.75  E-value=0.00025  Score=59.65  Aligned_cols=114  Identities=15%  Similarity=-0.018  Sum_probs=74.1

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCC--eEEEEEeCCCcccc-hhhhhhccCccCceEEE-EccCCCcchHHHHhcCCCE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGH--MVRTTVRDPEDLSK-VGFLWELNGAEERLKIM-KADLLMEGSFDEAIQGVDG   76 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~-~~D~~d~~~~~~~~~~~d~   76 (305)
                      ++||.|+|+ |.+|..++..|+..|.  +|.+++++.+.... ...+............. ..|..+       ++++|+
T Consensus        21 ~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-------~~daDi   92 (330)
T 3ldh_A           21 YNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-------SAGSKL   92 (330)
T ss_dssp             CCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-------CSSCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-------hCCCCE
Confidence            368999998 9999999999999986  89999886543221 11111110001111222 223322       778999


Q ss_pred             EEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEec
Q 039049           77 VFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS  124 (305)
Q Consensus        77 Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  124 (305)
                      ||-+||....+  .....+.+..|+...+.+.+.+.+...-..++.+|
T Consensus        93 VIitaG~p~kp--G~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvt  138 (330)
T 3ldh_A           93 VVITAGARQQE--GESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHP  138 (330)
T ss_dssp             EEECCSCCCCS--SCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCC
Confidence            99999976533  23344578999999999999988873223455555

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.74  E-value=4.2e-05  Score=65.32  Aligned_cols=72  Identities=13%  Similarity=0.086  Sum_probs=50.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcc---hHHHHhc--CCCE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG---SFDEAIQ--GVDG   76 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~~~~~~~--~~d~   76 (305)
                      ++|||+||+|.+|..+++.+...|.+|++++|++++......+        +... ..|..+.+   .+.++..  ++|+
T Consensus       168 ~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~--------ga~~-~~d~~~~~~~~~~~~~~~~~~~d~  238 (343)
T 2eih_A          168 DDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKAL--------GADE-TVNYTHPDWPKEVRRLTGGKGADK  238 (343)
T ss_dssp             CEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH--------TCSE-EEETTSTTHHHHHHHHTTTTCEEE
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc--------CCCE-EEcCCcccHHHHHHHHhCCCCceE
Confidence            5799999999999999999999999999999876543322211        1111 13555433   2333332  6899


Q ss_pred             EEEecc
Q 039049           77 VFHTAS   82 (305)
Q Consensus        77 Vi~~a~   82 (305)
                      ||++++
T Consensus       239 vi~~~g  244 (343)
T 2eih_A          239 VVDHTG  244 (343)
T ss_dssp             EEESSC
T ss_pred             EEECCC
Confidence            999998

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=97.71  E-value=0.00019  Score=60.40  Aligned_cols=113  Identities=12%  Similarity=0.051  Sum_probs=70.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC--eEEEEEeCCCcccc-hhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH--MVRTTVRDPEDLSK-VGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      +||.|+|+ |.+|..++..|+..+.  ++.++++++++... ...+........++.+.. |  +    .+.++++|+||
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aDvVi   77 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--E----YSDCKDADLVV   77 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--C----GGGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCCCCEEE
Confidence            68999998 9999999999998875  89999886543331 112211111112333332 2  2    23478999999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEec
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS  124 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  124 (305)
                      .+++.....  .....+.+..|+...+.+.+.+.+...-..++.+|
T Consensus        78 i~ag~~~~~--g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  121 (318)
T 1ez4_A           78 ITAGAPQKP--GESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (318)
T ss_dssp             ECCCC------------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             ECCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence            999875432  12234577899999999999988873223455554

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=97.70  E-value=0.0002  Score=59.95  Aligned_cols=112  Identities=15%  Similarity=0.160  Sum_probs=66.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC--eEEEEEeCCCcccc-hhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH--MVRTTVRDPEDLSK-VGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      |||.|+|+ |.+|..++..|+..|+  +|.+++++++.... ...+...........+...   +.    +.++++|+||
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~---~~----~a~~~aDvVI   72 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHG---GH----SELADAQVVI   72 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEE---CG----GGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEEC---CH----HHhCCCCEEE
Confidence            58999998 9999999999999998  99999887643221 1111111000112222211   22    3477999999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCcc-EEEEec
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVK-RVVLTS  124 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~S  124 (305)
                      .+++.....  .....+.+..|+.....+++.+.+. ... .+|.+|
T Consensus        73 i~~~~~~~~--g~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~~t  116 (304)
T 2v6b_A           73 LTAGANQKP--GESRLDLLEKNADIFRELVPQITRA-APDAVLLVTS  116 (304)
T ss_dssp             ECC--------------CHHHHHHHHHHHHHHHHHH-CSSSEEEECS
T ss_pred             EcCCCCCCC--CCcHHHHHHhHHHHHHHHHHHHHHh-CCCeEEEEec
Confidence            999764422  1223346788999999999988876 333 444444

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.69  E-value=6.5e-05  Score=59.61  Aligned_cols=66  Identities=20%  Similarity=0.303  Sum_probs=48.0

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ||+|.|+| +|.+|+.+++.|++.|++|++.+|++++.....   .     .++...        .+.++++++|+||.+
T Consensus        28 ~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~---~-----~g~~~~--------~~~~~~~~~DvVi~a   90 (215)
T 2vns_A           28 APKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARLF---P-----SAAQVT--------FQEEAVSSPEVIFVA   90 (215)
T ss_dssp             -CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHS---B-----TTSEEE--------EHHHHTTSCSEEEEC
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---H-----cCCcee--------cHHHHHhCCCEEEEC
Confidence            47899999 799999999999999999999998765322211   0     022221        356677899999988


Q ss_pred             ccc
Q 039049           81 ASP   83 (305)
Q Consensus        81 a~~   83 (305)
                      ...
T Consensus        91 v~~   93 (215)
T 2vns_A           91 VFR   93 (215)
T ss_dssp             SCG
T ss_pred             CCh
Confidence            754

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=97.67  E-value=0.00016  Score=61.24  Aligned_cols=94  Identities=14%  Similarity=0.150  Sum_probs=57.2

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcC---CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKG---HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGV   77 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~V   77 (305)
                      |+||.|.||+|++|+.+++.|.+++   .+++++....+......    ..  ...+.+...|   ++.    +.++|+|
T Consensus         3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~----~~--~~~i~~~~~~---~~~----~~~vDvV   69 (336)
T 2r00_A            3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYR----FN--GKTVRVQNVE---EFD----WSQVHIA   69 (336)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEE----ET--TEEEEEEEGG---GCC----GGGCSEE
T ss_pred             ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCcee----ec--CceeEEecCC---hHH----hcCCCEE
Confidence            5789999999999999999999873   46777763221100100    10  1122332222   222    3579999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccce
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCS  127 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  127 (305)
                      |-|.+...                  +......+.+. |+ ++|-.|+..
T Consensus        70 f~a~g~~~------------------s~~~a~~~~~~-G~-~vId~s~~~   99 (336)
T 2r00_A           70 LFSAGGEL------------------SAKWAPIAAEA-GV-VVIDNTSHF   99 (336)
T ss_dssp             EECSCHHH------------------HHHHHHHHHHT-TC-EEEECSSTT
T ss_pred             EECCCchH------------------HHHHHHHHHHc-CC-EEEEcCCcc
Confidence            98876532                  34455556666 75 688888763

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.67  E-value=4.4e-05  Score=65.42  Aligned_cols=73  Identities=12%  Similarity=0.016  Sum_probs=50.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcch---HHHHhc--CCCE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGS---FDEAIQ--GVDG   76 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~---~~~~~~--~~d~   76 (305)
                      ++|+|+||+|.+|..+++.+...|.+|++++|++++......+        +... ..|..+.+.   +.+...  ++|+
T Consensus       172 ~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~--------ga~~-~~d~~~~~~~~~~~~~~~~~~~D~  242 (351)
T 1yb5_A          172 ESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQN--------GAHE-VFNHREVNYIDKIKKYVGEKGIDI  242 (351)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT--------TCSE-EEETTSTTHHHHHHHHHCTTCEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHc--------CCCE-EEeCCCchHHHHHHHHcCCCCcEE
Confidence            5799999999999999999999999999999886543322111        1111 235544433   333333  6899


Q ss_pred             EEEeccc
Q 039049           77 VFHTASP   83 (305)
Q Consensus        77 Vi~~a~~   83 (305)
                      ||+++|.
T Consensus       243 vi~~~G~  249 (351)
T 1yb5_A          243 IIEMLAN  249 (351)
T ss_dssp             EEESCHH
T ss_pred             EEECCCh
Confidence            9999874

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.66  E-value=7.7e-05  Score=62.41  Aligned_cols=83  Identities=14%  Similarity=0.095  Sum_probs=54.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ++++|+|+ |.+|+.++..|++.|. +|++.+|+.+..++...+........+......++.+.+.+.+.+.++|+|||+
T Consensus       149 k~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiIINa  227 (312)
T 3t4e_A          149 KTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADILTNG  227 (312)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEEEEC
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEEEEC
Confidence            68999997 9999999999999997 899999984432222222211100012233334554533345667789999999


Q ss_pred             ccccc
Q 039049           81 ASPVL   85 (305)
Q Consensus        81 a~~~~   85 (305)
                      -+...
T Consensus       228 Tp~Gm  232 (312)
T 3t4e_A          228 TKVGM  232 (312)
T ss_dssp             SSTTS
T ss_pred             CcCCC
Confidence            77654

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=97.65  E-value=7.8e-05  Score=63.46  Aligned_cols=69  Identities=10%  Similarity=0.072  Sum_probs=56.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHH-hcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEA-IQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~Vi~~   80 (305)
                      ++|+|+|+ |.+|+.+++.|.+.|+ |+++.++++... ..        ..++.++.+|..|++.+.++ ++++|.||-+
T Consensus       116 ~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~--------~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~  184 (336)
T 1lnq_A          116 RHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VL--------RSGANFVHGDPTRVSDLEKANVRGARAVIVD  184 (336)
T ss_dssp             CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HH--------HTTCEEEESCTTSHHHHHHTCSTTEEEEEEC
T ss_pred             CCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HH--------hCCcEEEEeCCCCHHHHHhcChhhccEEEEc
Confidence            47999996 9999999999999999 999977765332 21        12688999999999999887 7889999966


Q ss_pred             c
Q 039049           81 A   81 (305)
Q Consensus        81 a   81 (305)
                      .
T Consensus       185 ~  185 (336)
T 1lnq_A          185 L  185 (336)
T ss_dssp             C
T ss_pred             C
Confidence            4

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=97.65  E-value=2e-05  Score=64.84  Aligned_cols=33  Identities=18%  Similarity=0.366  Sum_probs=27.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHH-cCCeEEEEEeC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLD-KGHMVRTTVRD   34 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~-~g~~V~~~~r~   34 (305)
                      +||+|+|++|.+|+.+++.+++ .|+++.++.+.
T Consensus         6 mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~   39 (273)
T 1dih_A            6 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALER   39 (273)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECC
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence            5899999999999999999875 56888866544

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=97.61  E-value=0.00083  Score=56.61  Aligned_cols=115  Identities=15%  Similarity=0.081  Sum_probs=70.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccch-hhhhhc-cCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKV-GFLWEL-NGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~-~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      +||.|+|| |.+|..++..|+..|+ +|.+++++++..... ..+... ........+..     ..++ +.++++|+||
T Consensus         5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~-----t~d~-~al~~aD~Vi   77 (322)
T 1t2d_A            5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSG-----SNTY-DDLAGADVVI   77 (322)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEE-----ECCG-GGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEE-----CCCH-HHhCCCCEEE
Confidence            68999998 9999999999999998 888888876544321 111110 00000111111     1223 4578999999


Q ss_pred             EeccccccCCCCc----hhhhhhhhhHHHHHHHHHHHHhcCCccEEEEec
Q 039049           79 HTASPVLVPYDNN----IQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS  124 (305)
Q Consensus        79 ~~a~~~~~~~~~~----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  124 (305)
                      .+++..... ...    ...+....|+...+.+.+.+.+...-..+|.+|
T Consensus        78 ~a~g~p~k~-g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  126 (322)
T 1t2d_A           78 VTAGFTKAP-GKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT  126 (322)
T ss_dssp             ECCSCSSCT-TCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             EeCCCCCCC-CCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            999864322 111    034467788888888888887772212444443

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.61  E-value=4.8e-05  Score=64.97  Aligned_cols=74  Identities=14%  Similarity=0.160  Sum_probs=49.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHh-----cCCCE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAI-----QGVDG   76 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-----~~~d~   76 (305)
                      ++|||+||+|.+|..+++.+...|.+|+++.|++++......  ..     +... ..|..+.+++.+.+     .++|+
T Consensus       157 ~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~--~~-----g~~~-~~d~~~~~~~~~~~~~~~~~~~d~  228 (345)
T 2j3h_A          157 ETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKT--KF-----GFDD-AFNYKEESDLTAALKRCFPNGIDI  228 (345)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH--TS-----CCSE-EEETTSCSCSHHHHHHHCTTCEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--Hc-----CCce-EEecCCHHHHHHHHHHHhCCCCcE
Confidence            579999999999999999999999999999987653322210  11     1111 23555432333222     26899


Q ss_pred             EEEeccc
Q 039049           77 VFHTASP   83 (305)
Q Consensus        77 Vi~~a~~   83 (305)
                      ||++++.
T Consensus       229 vi~~~g~  235 (345)
T 2j3h_A          229 YFENVGG  235 (345)
T ss_dssp             EEESSCH
T ss_pred             EEECCCH
Confidence            9999874

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=97.61  E-value=0.00037  Score=58.14  Aligned_cols=36  Identities=17%  Similarity=0.263  Sum_probs=32.6

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPE   36 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~   36 (305)
                      |++|.|+||.|.+|..++..|.+.|++|++.+|++.
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~   56 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW   56 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence            468999998899999999999999999999987754

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=97.61  E-value=0.00038  Score=57.65  Aligned_cols=113  Identities=10%  Similarity=0.016  Sum_probs=73.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC--eEEEEEeCCCccc-chhhhhhccC-ccCceEEEEccCCCcchHHHHhcCCCEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH--MVRTTVRDPEDLS-KVGFLWELNG-AEERLKIMKADLLMEGSFDEAIQGVDGV   77 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~-~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~V   77 (305)
                      |||.|+|+ |.||++++..|+.++.  ++.+++..+.... ....+..... ..........  .|++    .++++|+|
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~--~d~~----~~~~aDvV   73 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYS----LLKGSEII   73 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEE--SCGG----GGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecC--CCHH----HhCCCCEE
Confidence            67999995 9999999999988874  7888887653222 1112222110 0111222222  1222    37789999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCcc-EEEEec
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVK-RVVLTS  124 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~S  124 (305)
                      |-.||....+  .....+.++.|....+.+.+.+.+. ..+ .++.+|
T Consensus        74 vitAG~prkp--GmtR~dLl~~Na~I~~~i~~~i~~~-~p~aivlvvs  118 (294)
T 2x0j_A           74 VVTAGLARKP--GMTRLDLAHKNAGIIKDIAKKIVEN-APESKILVVT  118 (294)
T ss_dssp             EECCCCCCCS--SSCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEECS
T ss_pred             EEecCCCCCC--CCchHHHHHHHHHHHHHHHHHHHhc-CCceEEEEec
Confidence            9999976543  2345558899999999999999888 433 344444

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.60  E-value=0.00028  Score=59.22  Aligned_cols=114  Identities=17%  Similarity=0.022  Sum_probs=72.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCC--Ccccch-hhhhhc-cCccCceEEEEccCCCcchHHHHhcCCCE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDP--EDLSKV-GFLWEL-NGAEERLKIMKADLLMEGSFDEAIQGVDG   76 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~--~~~~~~-~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   76 (305)
                      ++|.|+|+ |.+|..++..|+..|+ +|+++++++  ...... ..+... +...........  .|.    +.++++|+
T Consensus         9 ~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t--~d~----~a~~~aDv   81 (315)
T 3tl2_A            9 KKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT--SDY----ADTADSDV   81 (315)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE--SCG----GGGTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc--CCH----HHhCCCCE
Confidence            48999997 9999999999999999 999998873  221110 111111 000001111111  122    35778999


Q ss_pred             EEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEec
Q 039049           77 VFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS  124 (305)
Q Consensus        77 Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  124 (305)
                      ||.+||....+  .....+.++.|+...+.+.+.+.+...-..++.+|
T Consensus        82 VIiaag~p~kp--g~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvs  127 (315)
T 3tl2_A           82 VVITAGIARKP--GMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLT  127 (315)
T ss_dssp             EEECCSCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECC
Confidence            99999875533  22345588999999999999998873222555555

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=97.60  E-value=0.00019  Score=61.48  Aligned_cols=34  Identities=21%  Similarity=0.252  Sum_probs=29.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC-CeEEEEEeCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG-HMVRTTVRDP   35 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~r~~   35 (305)
                      +||.|.||+|++|+.+++.|.+.+ .+|+++.+++
T Consensus         9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~   43 (354)
T 1ys4_A            9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASE   43 (354)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECT
T ss_pred             ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEccc
Confidence            589999999999999999998765 5888887654

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.60  E-value=2.4e-05  Score=57.85  Aligned_cols=70  Identities=13%  Similarity=0.170  Sum_probs=50.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      ++|+|+|+ |.+|+.+++.|...|++|++.+|++++......   ..    +....     ..+++.++++++|+||.+.
T Consensus        22 ~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~---~~----~~~~~-----~~~~~~~~~~~~Divi~at   88 (144)
T 3oj0_A           22 NKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAE---KY----EYEYV-----LINDIDSLIKNNDVIITAT   88 (144)
T ss_dssp             CEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHH---HH----TCEEE-----ECSCHHHHHHTCSEEEECS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHH---Hh----CCceE-----eecCHHHHhcCCCEEEEeC
Confidence            68999996 999999999999999999999998764332211   11    11221     2334667778999999987


Q ss_pred             ccc
Q 039049           82 SPV   84 (305)
Q Consensus        82 ~~~   84 (305)
                      +..
T Consensus        89 ~~~   91 (144)
T 3oj0_A           89 SSK   91 (144)
T ss_dssp             CCS
T ss_pred             CCC
Confidence            764

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.59  E-value=8.2e-05  Score=63.78  Aligned_cols=73  Identities=19%  Similarity=0.105  Sum_probs=50.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHH---h-cCCCEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEA---I-QGVDGV   77 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~---~-~~~d~V   77 (305)
                      ++|+|+||+|.+|..+++.+...|.+|++++|++++......+        +...+ .|..+.+..+.+   . .++|+|
T Consensus       169 ~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l--------Ga~~~-~~~~~~~~~~~~~~~~~~g~Dvv  239 (353)
T 4dup_A          169 ESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERL--------GAKRG-INYRSEDFAAVIKAETGQGVDII  239 (353)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH--------TCSEE-EETTTSCHHHHHHHHHSSCEEEE
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc--------CCCEE-EeCCchHHHHHHHHHhCCCceEE
Confidence            5799999999999999999999999999999887644332221        11111 244443322222   2 268999


Q ss_pred             EEeccc
Q 039049           78 FHTASP   83 (305)
Q Consensus        78 i~~a~~   83 (305)
                      |++++.
T Consensus       240 id~~g~  245 (353)
T 4dup_A          240 LDMIGA  245 (353)
T ss_dssp             EESCCG
T ss_pred             EECCCH
Confidence            999885

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=97.59  E-value=0.0004  Score=58.23  Aligned_cols=113  Identities=13%  Similarity=0.102  Sum_probs=73.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC--CeEEEEEeCCCcccc-hhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG--HMVRTTVRDPEDLSK-VGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      |||.|+|+ |.+|.+++..|+..+  .++.++++++++... ...+........++.+.. +  +.    +.++++|+||
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~~----~a~~~aD~Vi   72 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--SY----GDLEGARAVV   72 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--CG----GGGTTEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--CH----HHhCCCCEEE
Confidence            57999998 999999999999887  589999887543331 111211111111333332 2  22    3478999999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEec
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS  124 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  124 (305)
                      ..++.....  ..........|+...+.+.+.+.+...-..++.+|
T Consensus        73 i~ag~~~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  116 (310)
T 2xxj_A           73 LAAGVAQRP--GETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVAT  116 (310)
T ss_dssp             ECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             ECCCCCCCC--CcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            999875432  22334578899999999999988873223455554

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=97.59  E-value=0.00014  Score=62.20  Aligned_cols=98  Identities=17%  Similarity=0.212  Sum_probs=58.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      +||.|.||+|++|+.+++.|.+.+. +++++.+..+...+.....  +.....+   ..|+.-.+  .+.++++|+||.|
T Consensus        17 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~--~~~~~~v---~~dl~~~~--~~~~~~vDvVf~a   89 (359)
T 1xyg_A           17 IRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVF--PHLRAQK---LPTLVSVK--DADFSTVDAVFCC   89 (359)
T ss_dssp             EEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHC--GGGTTSC---CCCCBCGG--GCCGGGCSEEEEC
T ss_pred             cEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhC--chhcCcc---cccceecc--hhHhcCCCEEEEc
Confidence            4799999999999999999998764 8888876432221111110  0000010   12332221  2344589999998


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccce
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCS  127 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  127 (305)
                      .+...                  +......+ +. |+ ++|-.|+..
T Consensus        90 tp~~~------------------s~~~a~~~-~a-G~-~VId~sa~~  115 (359)
T 1xyg_A           90 LPHGT------------------TQEIIKEL-PT-AL-KIVDLSADF  115 (359)
T ss_dssp             CCTTT------------------HHHHHHTS-CT-TC-EEEECSSTT
T ss_pred             CCchh------------------HHHHHHHH-hC-CC-EEEECCccc
Confidence            86643                  33445556 55 65 688888753

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.58  E-value=6.4e-05  Score=64.55  Aligned_cols=74  Identities=14%  Similarity=0.057  Sum_probs=49.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHH---Hhc-CCCE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDE---AIQ-GVDG   76 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~---~~~-~~d~   76 (305)
                      ++|+|+||+|.||..+++.+...|. +|+++++++++.....   ...    +.. ...|..+.+..+.   ... ++|+
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~---~~~----g~~-~~~d~~~~~~~~~~~~~~~~~~d~  233 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLT---SEL----GFD-AAINYKKDNVAEQLRESCPAGVDV  233 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH---HTS----CCS-EEEETTTSCHHHHHHHHCTTCEEE
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHH---HHc----CCc-eEEecCchHHHHHHHHhcCCCCCE
Confidence            6899999999999999999999999 9999998754322211   101    111 1245555332222   222 5899


Q ss_pred             EEEeccc
Q 039049           77 VFHTASP   83 (305)
Q Consensus        77 Vi~~a~~   83 (305)
                      ||+++|.
T Consensus       234 vi~~~G~  240 (357)
T 2zb4_A          234 YFDNVGG  240 (357)
T ss_dssp             EEESCCH
T ss_pred             EEECCCH
Confidence            9999984

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=97.58  E-value=0.00069  Score=56.82  Aligned_cols=114  Identities=15%  Similarity=0.019  Sum_probs=71.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHc--CCeEEEEEeCCCcccchh-hhhhc-cCccCceEEEEccCCCcchHHHHhcCCCEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDK--GHMVRTTVRDPEDLSKVG-FLWEL-NGAEERLKIMKADLLMEGSFDEAIQGVDGV   77 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~-~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~d~V   77 (305)
                      |||.|+|+ |.+|..++..|+..  |++|++++++++...... .+... ........+...  .|   +.. ++++|+|
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d---~~~-l~~aDvV   73 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--ND---YAD-TANSDIV   73 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SC---GGG-GTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEEC--CC---HHH-HCCCCEE
Confidence            57999998 99999999999985  799999999876443221 11110 000001111110  22   223 6789999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEec
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS  124 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  124 (305)
                      |-+++.....  .....+.+..|+.....+.+.+.+...-..+|.+|
T Consensus        74 iiav~~p~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~t  118 (310)
T 1guz_A           74 IITAGLPRKP--GMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS  118 (310)
T ss_dssp             EECCSCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred             EEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEc
Confidence            9999754321  12234577889999999998887772223455553

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.58  E-value=7.8e-05  Score=61.91  Aligned_cols=67  Identities=18%  Similarity=0.192  Sum_probs=47.5

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ||+|.|+|+||.+|+.+++.|++.|++|++.+|+++......   . .    ++     +..+   ..++++++|+||-+
T Consensus        11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~---~-~----g~-----~~~~---~~~~~~~aDvVi~a   74 (286)
T 3c24_A           11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQ---G-M----GI-----PLTD---GDGWIDEADVVVLA   74 (286)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHH---H-T----TC-----CCCC---SSGGGGTCSEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH---h-c----CC-----CcCC---HHHHhcCCCEEEEc
Confidence            469999999999999999999999999999988765332221   1 1    11     1112   23456789999977


Q ss_pred             ccc
Q 039049           81 ASP   83 (305)
Q Consensus        81 a~~   83 (305)
                      ...
T Consensus        75 v~~   77 (286)
T 3c24_A           75 LPD   77 (286)
T ss_dssp             SCH
T ss_pred             CCc
Confidence            643

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.58  E-value=0.00038  Score=58.75  Aligned_cols=113  Identities=12%  Similarity=0.045  Sum_probs=71.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC--eEEEEEeCCCcccc-hhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH--MVRTTVRDPEDLSK-VGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      +||.|+|+ |.+|..++..|+..+.  ++.+++++.++... ...+........++.+.. |  +    .+.++++|+||
T Consensus        10 ~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~----~~a~~~aDvVi   81 (326)
T 2zqz_A           10 QKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--E----YSDAKDADLVV   81 (326)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--C----GGGGGGCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCCCCEEE
Confidence            68999998 9999999999988875  89999886543322 111211111112333332 2  2    23477899999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEec
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS  124 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  124 (305)
                      ..++.....  .......+..|+...+.+.+.+.+...-..++.+|
T Consensus        82 i~ag~~~k~--g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  125 (326)
T 2zqz_A           82 ITAGAPQKP--GETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             ECCCCC-------CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             EcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence            999875432  22234577899999999999988873223455554

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=97.57  E-value=0.00016  Score=59.19  Aligned_cols=74  Identities=9%  Similarity=0.074  Sum_probs=45.4

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHc-CCeEEEE-EeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDK-GHMVRTT-VRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      |+||.|+|++|.+|+.+++.+.+. +.++.++ +|+.+.... .......    ++.  . ++.-.+++.++++++|+||
T Consensus         7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G-~d~gel~----g~~--~-gv~v~~dl~~ll~~~DVVI   78 (272)
T 4f3y_A            7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLG-QDAGAFL----GKQ--T-GVALTDDIERVCAEADYLI   78 (272)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTT-SBTTTTT----TCC--C-SCBCBCCHHHHHHHCSEEE
T ss_pred             ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCccccc-ccHHHHh----CCC--C-CceecCCHHHHhcCCCEEE
Confidence            578999999999999999999875 5677775 454321110 0000000    000  0 2222345677777899999


Q ss_pred             Eecc
Q 039049           79 HTAS   82 (305)
Q Consensus        79 ~~a~   82 (305)
                      ++..
T Consensus        79 DfT~   82 (272)
T 4f3y_A           79 DFTL   82 (272)
T ss_dssp             ECSC
T ss_pred             EcCC
Confidence            9863

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=97.56  E-value=7.3e-05  Score=66.09  Aligned_cols=81  Identities=16%  Similarity=0.215  Sum_probs=51.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEE-E-----EccCCCcchHHHHhcCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKI-M-----KADLLMEGSFDEAIQGVD   75 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~-----~~D~~d~~~~~~~~~~~d   75 (305)
                      |+|.|+|+ |++|..++..|++.|++|++++|++++......- ..+...+++.- +     .+.+.-..++.++++++|
T Consensus         3 mkI~VIG~-G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g-~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aD   80 (450)
T 3gg2_A            3 LDIAVVGI-GYVGLVSATCFAELGANVRCIDTDRNKIEQLNSG-TIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEAD   80 (450)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-CSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcC-CCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCC
Confidence            68999995 9999999999999999999999987643332210 00000000000 0     011111234666778899


Q ss_pred             EEEEecccc
Q 039049           76 GVFHTASPV   84 (305)
Q Consensus        76 ~Vi~~a~~~   84 (305)
                      +||-+.+..
T Consensus        81 vViiaVptp   89 (450)
T 3gg2_A           81 IIFIAVGTP   89 (450)
T ss_dssp             EEEECCCCC
T ss_pred             EEEEEcCCC
Confidence            999887664

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.55  E-value=7.1e-05  Score=61.62  Aligned_cols=74  Identities=14%  Similarity=0.174  Sum_probs=49.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      ++++|+|+ |.+|++++..|++.|.+|++.+|+.++.......  . .....+.  ..|+   +++.+  .++|+|||++
T Consensus       120 k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~--~-~~~~~~~--~~~~---~~~~~--~~~DivVn~t  188 (271)
T 1nyt_A          120 LRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKL--F-AHTGSIQ--ALSM---DELEG--HEFDLIINAT  188 (271)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH--T-GGGSSEE--ECCS---GGGTT--CCCSEEEECC
T ss_pred             CEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHH--h-hccCCee--EecH---HHhcc--CCCCEEEECC
Confidence            68999998 7899999999999999999999986543322211  1 1001111  1232   22222  5799999999


Q ss_pred             ccccc
Q 039049           82 SPVLV   86 (305)
Q Consensus        82 ~~~~~   86 (305)
                      +....
T Consensus       189 ~~~~~  193 (271)
T 1nyt_A          189 SSGIS  193 (271)
T ss_dssp             SCGGG
T ss_pred             CCCCC
Confidence            87653

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=97.55  E-value=0.0012  Score=55.79  Aligned_cols=102  Identities=19%  Similarity=0.068  Sum_probs=67.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchh-hhhhcc---CccCceEEEEccCCCcchHHHHhcCCCE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVG-FLWELN---GAEERLKIMKADLLMEGSFDEAIQGVDG   76 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~-~~~~~~---~~~~~~~~~~~D~~d~~~~~~~~~~~d~   76 (305)
                      +||.|+|| |.+|..++..|+..|+ +|.+++++++...... .+....   ....++... .|      + +.++++|+
T Consensus        15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d------~-~al~~aD~   85 (328)
T 2hjr_A           15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE-NN------Y-EYLQNSDV   85 (328)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SC------G-GGGTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC-CC------H-HHHCCCCE
Confidence            58999998 9999999999999998 9999999876443211 111110   001122211 22      3 45789999


Q ss_pred             EEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhc
Q 039049           77 VFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKA  114 (305)
Q Consensus        77 Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  114 (305)
                      ||-+++..... ... ..+....|+...+.+++.+.+.
T Consensus        86 VI~avg~p~k~-g~t-r~dl~~~n~~i~~~i~~~i~~~  121 (328)
T 2hjr_A           86 VIITAGVPRKP-NMT-RSDLLTVNAKIVGSVAENVGKY  121 (328)
T ss_dssp             EEECCSCCCCT-TCC-SGGGHHHHHHHHHHHHHHHHHH
T ss_pred             EEEcCCCCCCC-CCc-hhhHHhhhHHHHHHHHHHHHHH
Confidence            99999764422 111 2235677888888888888776

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.55  E-value=7.9e-05  Score=63.40  Aligned_cols=73  Identities=16%  Similarity=0.108  Sum_probs=50.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccch-hhhhhccCccCceEEEEccCCCcchHHHHh----cCCCE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKV-GFLWELNGAEERLKIMKADLLMEGSFDEAI----QGVDG   76 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~----~~~d~   76 (305)
                      ++|||+||+|.||..+++.+...|.+|+++.|++++.... ..+        +... ..|..+.+....+.    .++|+
T Consensus       151 ~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~--------g~~~-~~~~~~~~~~~~~~~~~~~~~d~  221 (336)
T 4b7c_A          151 ETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL--------GFDG-AIDYKNEDLAAGLKRECPKGIDV  221 (336)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT--------CCSE-EEETTTSCHHHHHHHHCTTCEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--------CCCE-EEECCCHHHHHHHHHhcCCCceE
Confidence            5799999999999999999999999999999876543322 111        1111 13444443333322    26899


Q ss_pred             EEEeccc
Q 039049           77 VFHTASP   83 (305)
Q Consensus        77 Vi~~a~~   83 (305)
                      ||++++.
T Consensus       222 vi~~~g~  228 (336)
T 4b7c_A          222 FFDNVGG  228 (336)
T ss_dssp             EEESSCH
T ss_pred             EEECCCc
Confidence            9999875

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=97.55  E-value=0.00048  Score=57.80  Aligned_cols=104  Identities=13%  Similarity=0.100  Sum_probs=67.0

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcC--CeEEEEEeCCCcccchh-hhhhcc-CccCceEEEEccCCCcchHHHHhcCCCE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKG--HMVRTTVRDPEDLSKVG-FLWELN-GAEERLKIMKADLLMEGSFDEAIQGVDG   76 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~-~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~d~   76 (305)
                      ||+|.|+| +|.+|..++..|++.|  ++|++++|+++...... .+.... .....+.....   |   . +.++++|+
T Consensus         1 m~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---d---~-~~~~~aDv   72 (309)
T 1hyh_A            1 ARKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIN---D---W-AALADADV   72 (309)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEES---C---G-GGGTTCSE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeC---C---H-HHhCCCCE
Confidence            78999999 6999999999999999  79999999765433221 111100 00112232222   2   2 34678999


Q ss_pred             EEEecccccc----CCCCchhhhhhhhhHHHHHHHHHHHHhc
Q 039049           77 VFHTASPVLV----PYDNNIQATLIDPCIKGTLNVLSSCKKA  114 (305)
Q Consensus        77 Vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~  114 (305)
                      ||-+++....    . .. ...+....|+.....+++.+.+.
T Consensus        73 Viiav~~~~~~~~~~-g~-~r~~l~~~n~~i~~~i~~~i~~~  112 (309)
T 1hyh_A           73 VISTLGNIKLQQDNP-TG-DRFAELKFTSSMVQSVGTNLKES  112 (309)
T ss_dssp             EEECCSCGGGTC---------CTTHHHHHHHHHHHHHHHHHT
T ss_pred             EEEecCCcccCCCCC-CC-CHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999886542    1 11 22346778888888888888775

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.54  E-value=0.00064  Score=57.20  Aligned_cols=113  Identities=12%  Similarity=0.100  Sum_probs=72.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC--eEEEEEeCCCcccc-hhhhhhccCcc-CceEEEEccCCCcchHHHHhcCCCEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH--MVRTTVRDPEDLSK-VGFLWELNGAE-ERLKIMKADLLMEGSFDEAIQGVDGV   77 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~-~~~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~d~V   77 (305)
                      +||.|+|+ |.+|.+++..|+..|.  +|.++++++++... ...+....... .++.+.. |  +    .+.++++|+|
T Consensus         7 ~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~----~~a~~~aDvV   78 (317)
T 3d0o_A            7 NKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--E----YSDCHDADLV   78 (317)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--C----GGGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--C----HHHhCCCCEE
Confidence            48999998 9999999999998884  89888876543321 11111111111 1233332 2  2    3447899999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEec
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS  124 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  124 (305)
                      |.+++.....  .......+..|+.....+.+.+.+...-..++.+|
T Consensus        79 vi~ag~~~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (317)
T 3d0o_A           79 VICAGAAQKP--GETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT  123 (317)
T ss_dssp             EECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EECCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence            9999875432  22334567899999999999988873222444443

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.54  E-value=0.00014  Score=61.71  Aligned_cols=73  Identities=16%  Similarity=0.089  Sum_probs=49.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcc---hHHHHhc--CCCE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG---SFDEAIQ--GVDG   76 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~~~~~~~--~~d~   76 (305)
                      ++|||+||+|.+|...++.+...|.+|+++++++++......+        +... ..|..+.+   .+.++..  ++|+
T Consensus       150 ~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~--------ga~~-~~~~~~~~~~~~~~~~~~~~g~D~  220 (334)
T 3qwb_A          150 DYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEY--------GAEY-LINASKEDILRQVLKFTNGKGVDA  220 (334)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT--------TCSE-EEETTTSCHHHHHHHHTTTSCEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc--------CCcE-EEeCCCchHHHHHHHHhCCCCceE
Confidence            5799999999999999999999999999999876543322211        1111 12333333   2333332  6899


Q ss_pred             EEEeccc
Q 039049           77 VFHTASP   83 (305)
Q Consensus        77 Vi~~a~~   83 (305)
                      ||++++.
T Consensus       221 vid~~g~  227 (334)
T 3qwb_A          221 SFDSVGK  227 (334)
T ss_dssp             EEECCGG
T ss_pred             EEECCCh
Confidence            9999985

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.53  E-value=0.00027  Score=57.34  Aligned_cols=78  Identities=19%  Similarity=0.121  Sum_probs=50.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCccc----------------chhhhh-hccCccC--ceEEEEccC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLS----------------KVGFLW-ELNGAEE--RLKIMKADL   61 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~----------------~~~~~~-~~~~~~~--~~~~~~~D~   61 (305)
                      ++|+|+|+ |.+|+++++.|+..|. ++++++++.-..+                +...+. .+...++  .++.+..++
T Consensus        32 ~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~  110 (249)
T 1jw9_B           32 SRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL  110 (249)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred             CeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccC
Confidence            57999996 9999999999999996 8999988752111                111110 0111112  344445555


Q ss_pred             CCcchHHHHhcCCCEEEEec
Q 039049           62 LMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus        62 ~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      . .+.+.+.++++|+||.+.
T Consensus       111 ~-~~~~~~~~~~~DvVi~~~  129 (249)
T 1jw9_B          111 D-DAELAALIAEHDLVLDCT  129 (249)
T ss_dssp             C-HHHHHHHHHTSSEEEECC
T ss_pred             C-HhHHHHHHhCCCEEEEeC
Confidence            4 345677788999999885

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.53  E-value=0.00046  Score=57.39  Aligned_cols=26  Identities=27%  Similarity=0.152  Sum_probs=24.1

Q ss_pred             chHHHHHHHHHHHcCCeEEEEEeCCC
Q 039049           11 GFIAAHLVKALLDKGHMVRTTVRDPE   36 (305)
Q Consensus        11 G~iG~~l~~~l~~~g~~V~~~~r~~~   36 (305)
                      |..|.+++++++.+|++|+.+.+...
T Consensus        65 GkmG~aiAe~~~~~Ga~V~lv~g~~s   90 (313)
T 1p9o_A           65 GRRGATSAEAFLAAGYGVLFLYRARS   90 (313)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred             cHHHHHHHHHHHHCCCEEEEEecCCC
Confidence            99999999999999999999999654

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.51  E-value=0.00013  Score=62.75  Aligned_cols=96  Identities=15%  Similarity=0.090  Sum_probs=60.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcc---hHHHHh-cCCCEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG---SFDEAI-QGVDGV   77 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~~~~~~-~~~d~V   77 (305)
                      ++|||+||+|.+|..+++.+...|.+|+++++++++......+        +...+ .|..+.+   .+.+.. .++|+|
T Consensus       165 ~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~--------Ga~~~-~~~~~~~~~~~~~~~~~~g~D~v  235 (362)
T 2c0c_A          165 KKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSL--------GCDRP-INYKTEPVGTVLKQEYPEGVDVV  235 (362)
T ss_dssp             CEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT--------TCSEE-EETTTSCHHHHHHHHCTTCEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHc--------CCcEE-EecCChhHHHHHHHhcCCCCCEE
Confidence            5799999999999999999999999999999876533222111        11211 2333322   222222 268999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccce
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCS  127 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  127 (305)
                      |++++..           .       ....++.++..   .++|.+++..
T Consensus       236 id~~g~~-----------~-------~~~~~~~l~~~---G~iv~~g~~~  264 (362)
T 2c0c_A          236 YESVGGA-----------M-------FDLAVDALATK---GRLIVIGFIS  264 (362)
T ss_dssp             EECSCTH-----------H-------HHHHHHHEEEE---EEEEECCCGG
T ss_pred             EECCCHH-----------H-------HHHHHHHHhcC---CEEEEEeCCC
Confidence            9998741           1       23444444443   4888887643

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=97.50  E-value=0.00061  Score=58.17  Aligned_cols=93  Identities=23%  Similarity=0.258  Sum_probs=54.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC---eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH---MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      ++|.|+||||++|..|++.|.+.++   ++..+..+.+...... +   .  .....+...|   .+    .++++|+||
T Consensus         3 ~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~-~---~--~~~~~~~~~~---~~----~~~~~Dvvf   69 (366)
T 3pwk_A            3 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLK-F---K--DQDITIEETT---ET----AFEGVDIAL   69 (366)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEE-E---T--TEEEEEEECC---TT----TTTTCSEEE
T ss_pred             cEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcce-e---c--CCCceEeeCC---HH----HhcCCCEEE
Confidence            5899999999999999999988765   3444432221111110 0   0  0122222222   11    246899999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccce
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCS  127 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  127 (305)
                      -|.+...                  +......+.+. |+ ++|=+|+..
T Consensus        70 ~a~~~~~------------------s~~~a~~~~~~-G~-~vIDlSa~~   98 (366)
T 3pwk_A           70 FSAGSST------------------SAKYAPYAVKA-GV-VVVDNTSYF   98 (366)
T ss_dssp             ECSCHHH------------------HHHHHHHHHHT-TC-EEEECSSTT
T ss_pred             ECCChHh------------------HHHHHHHHHHC-CC-EEEEcCCcc
Confidence            8876532                  33445555566 75 678888753

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=97.49  E-value=0.00069  Score=57.05  Aligned_cols=105  Identities=17%  Similarity=0.115  Sum_probs=66.6

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCC--eEEEEEeCCCcccc-hhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGH--MVRTTVRDPEDLSK-VGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGV   77 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~V   77 (305)
                      ||||.|+|+ |.+|..++..|+..|+  +|++++|+++.... ...+...............  .+.    +.++++|+|
T Consensus         7 ~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~----~~~~~aD~V   79 (319)
T 1lld_A            7 PTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDP----EICRDADMV   79 (319)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCG----GGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeC--CCH----HHhCCCCEE
Confidence            478999998 9999999999999998  99999987543321 0011110000011222211  122    236689999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhc
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKA  114 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  114 (305)
                      |-+++.....  .....+....|+.....+++.+++.
T Consensus        80 ii~v~~~~~~--g~~r~~~~~~n~~~~~~~~~~i~~~  114 (319)
T 1lld_A           80 VITAGPRQKP--GQSRLELVGATVNILKAIMPNLVKV  114 (319)
T ss_dssp             EECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999754322  1233446788888888888888765

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.48  E-value=7e-05  Score=64.33  Aligned_cols=75  Identities=17%  Similarity=0.226  Sum_probs=53.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      ++|+|+|+ |-+|+.+++.+...|.+|++++|++++.........     ..+..+   ..+.+.+.+.+.++|+||+++
T Consensus       168 ~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~-----~~~~~~---~~~~~~~~~~~~~~DvVI~~~  238 (361)
T 1pjc_A          168 GKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG-----SRVELL---YSNSAEIETAVAEADLLIGAV  238 (361)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-----GGSEEE---ECCHHHHHHHHHTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhC-----ceeEee---eCCHHHHHHHHcCCCEEEECC
Confidence            57999998 999999999999999999999998764433221110     012122   123445667777999999998


Q ss_pred             cccc
Q 039049           82 SPVL   85 (305)
Q Consensus        82 ~~~~   85 (305)
                      +...
T Consensus       239 ~~~~  242 (361)
T 1pjc_A          239 LVPG  242 (361)
T ss_dssp             CCTT
T ss_pred             CcCC
Confidence            7643

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=97.47  E-value=0.00073  Score=54.42  Aligned_cols=72  Identities=18%  Similarity=0.263  Sum_probs=47.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHc-CCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-----CCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDK-GHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-----GVD   75 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----~~d   75 (305)
                      |||+|+|++|.+|+.+++.+.+. ++++.++.....+...   +..  .   ... +..|++.++...+.+.     +.+
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~---~~~--~---~~D-vvIDfT~p~a~~~~~~~a~~~g~~   71 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSL---LTD--G---NTE-VVIDFTHPDVVMGNLEFLIDNGIH   71 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHH---HHH--T---TCC-EEEECSCTTTHHHHHHHHHHTTCE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHH---Hhc--c---CCc-EEEEccChHHHHHHHHHHHHcCCC
Confidence            47999999999999999999865 8999887765432221   110  0   122 4567777776665442     677


Q ss_pred             EEEEecc
Q 039049           76 GVFHTAS   82 (305)
Q Consensus        76 ~Vi~~a~   82 (305)
                      +|+-..|
T Consensus        72 ~VigTTG   78 (245)
T 1p9l_A           72 AVVGTTG   78 (245)
T ss_dssp             EEECCCC
T ss_pred             EEEcCCC
Confidence            7775543

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=97.46  E-value=0.001  Score=55.93  Aligned_cols=103  Identities=18%  Similarity=0.139  Sum_probs=68.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC--eEEEEEeCCCcccc-hhhhhhccC-ccCceEEEEccCCCcchHHHHhcCCCEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH--MVRTTVRDPEDLSK-VGFLWELNG-AEERLKIMKADLLMEGSFDEAIQGVDGV   77 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~-~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~V   77 (305)
                      +||.|+|+ |.+|..++..|+..|.  +|.+++++++.... ...+..... ...++.+.. |  +    .+.++++|+|
T Consensus         7 ~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~----~~al~~aDvV   78 (316)
T 1ldn_A            7 ARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--D----YDDCRDADLV   78 (316)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--C----GGGTTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--c----HHHhCCCCEE
Confidence            68999998 9999999999988774  89999887642221 111221111 111233332 1  2    2347799999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhc
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKA  114 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  114 (305)
                      |.+++...... . ...+.+..|......+++.+.+.
T Consensus        79 iia~~~~~~~g-~-~r~dl~~~n~~i~~~i~~~i~~~  113 (316)
T 1ldn_A           79 VICAGANQKPG-E-TRLDLVDKNIAIFRSIVESVMAS  113 (316)
T ss_dssp             EECCSCCCCTT-T-CSGGGHHHHHHHHHHHHHHHHHH
T ss_pred             EEcCCCCCCCC-C-CHHHHHHcChHHHHHHHHHHHHH
Confidence            99998765432 2 22446788888889999888887

>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*

Probab=97.46  E-value=0.00088  Score=49.32  Aligned_cols=83  Identities=20%  Similarity=0.134  Sum_probs=52.8

Q ss_pred             CcEEEeCCc---chHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            2 PEYCVTGGT---GFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~---G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      ++|+|+|++   |.+|..+++.|.+.|++|+.+  ++... +.      .    ++.       -..++.++.+.+|+++
T Consensus        23 ~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~V--np~~~-~i------~----G~~-------~y~sl~~l~~~vDlvv   82 (144)
T 2d59_A           23 KKIALVGASPKPERDANIVMKYLLEHGYDVYPV--NPKYE-EV------L----GRK-------CYPSVLDIPDKIEVVD   82 (144)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEE--CTTCS-EE------T----TEE-------CBSSGGGCSSCCSEEE
T ss_pred             CEEEEEccCCCCCchHHHHHHHHHHCCCEEEEE--CCCCC-eE------C----Cee-------ccCCHHHcCCCCCEEE
Confidence            579999998   899999999999999986665  33321 10      0    111       1222333344789888


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEe
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLT  123 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  123 (305)
                      -+....                  ....+++.|.+. +++.+++.
T Consensus        83 i~vp~~------------------~~~~vv~~~~~~-gi~~i~~~  108 (144)
T 2d59_A           83 LFVKPK------------------LTMEYVEQAIKK-GAKVVWFQ  108 (144)
T ss_dssp             ECSCHH------------------HHHHHHHHHHHH-TCSEEEEC
T ss_pred             EEeCHH------------------HHHHHHHHHHHc-CCCEEEEC
Confidence            664321                  144566777777 88876654

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=97.46  E-value=0.00046  Score=50.44  Aligned_cols=85  Identities=21%  Similarity=0.282  Sum_probs=54.8

Q ss_pred             CcEEEeCCc---chHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            2 PEYCVTGGT---GFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~---G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      ++|.|+|++   |.+|..+++.|.+.|++|+.++++....   .          ++.       -..++.++.+.+|+++
T Consensus        15 ~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i---~----------G~~-------~~~s~~el~~~vDlvi   74 (138)
T 1y81_A           15 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI---E----------GLK-------CYRSVRELPKDVDVIV   74 (138)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE---T----------TEE-------CBSSGGGSCTTCCEEE
T ss_pred             CeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE---C----------Cee-------ecCCHHHhCCCCCEEE
Confidence            579999987   8999999999999999977775543210   0          111       1223334445789988


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEecc
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSS  125 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS  125 (305)
                      -+.....                  ...+++.|.+. +++.++..+|
T Consensus        75 i~vp~~~------------------v~~v~~~~~~~-g~~~i~~~~~  102 (138)
T 1y81_A           75 FVVPPKV------------------GLQVAKEAVEA-GFKKLWFQPG  102 (138)
T ss_dssp             ECSCHHH------------------HHHHHHHHHHT-TCCEEEECTT
T ss_pred             EEeCHHH------------------HHHHHHHHHHc-CCCEEEEcCc
Confidence            7654211                  34455556666 8887766554

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.45  E-value=0.00028  Score=60.30  Aligned_cols=73  Identities=11%  Similarity=0.154  Sum_probs=50.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcc---hHHHHh--cCCCE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG---SFDEAI--QGVDG   76 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~~~~~~--~~~d~   76 (305)
                      ++++|+||+|.+|...++.+...|.+|+++.+++++.+....+        +...+ .|..+.+   .+.++.  .++|+
T Consensus       166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~--------Ga~~~-~~~~~~~~~~~v~~~~~~~g~D~  236 (349)
T 3pi7_A          166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDI--------GAAHV-LNEKAPDFEATLREVMKAEQPRI  236 (349)
T ss_dssp             SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHH--------TCSEE-EETTSTTHHHHHHHHHHHHCCCE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc--------CCCEE-EECCcHHHHHHHHHHhcCCCCcE
Confidence            5799999999999999999999999999999887654333222        11111 2333322   233333  27999


Q ss_pred             EEEeccc
Q 039049           77 VFHTASP   83 (305)
Q Consensus        77 Vi~~a~~   83 (305)
                      ||++++.
T Consensus       237 vid~~g~  243 (349)
T 3pi7_A          237 FLDAVTG  243 (349)
T ss_dssp             EEESSCH
T ss_pred             EEECCCC
Confidence            9999875

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.44  E-value=0.0003  Score=59.63  Aligned_cols=172  Identities=15%  Similarity=0.042  Sum_probs=96.4

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCC-------eEEEEEeCCCccc-c--hhhhhhccCccCceEEEEccCCCcchHHHHhc
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGH-------MVRTTVRDPEDLS-K--VGFLWELNGAEERLKIMKADLLMEGSFDEAIQ   72 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~-------~V~~~~r~~~~~~-~--~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~   72 (305)
                      ||.|+||+|.||++|+-.|++...       ++.+++..+.... +  .-.+..... .........     ....+.++
T Consensus        26 KVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~-~~~~~~~~~-----~~~~~a~~   99 (345)
T 4h7p_A           26 KVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAF-PLLDKVVVT-----ADPRVAFD   99 (345)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTC-TTEEEEEEE-----SCHHHHTT
T ss_pred             EEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCc-cCCCcEEEc-----CChHHHhC
Confidence            799999999999999998887532       5777765432110 0  111211110 001112221     22456789


Q ss_pred             CCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCCCcccCCC-CCCCcc
Q 039049           73 GVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAK-SVKRVVLTSSCSSIRYRHDAQQVSPLNES-HWSDPD  150 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~E~-~~~~~~  150 (305)
                      ++|+||-+||....+  .....+.++.|....+.+.+.+.+.. .-.+++.+|-..-....      ...... ..+.+.
T Consensus       100 ~advVvi~aG~prkp--GmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNPvd~~~~------i~~~~~~g~~~~r  171 (345)
T 4h7p_A          100 GVAIAIMCGAFPRKA--GMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNPANTNAL------ILLKSAQGKLNPR  171 (345)
T ss_dssp             TCSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHH------HHHHHTTTCSCGG
T ss_pred             CCCEEEECCCCCCCC--CCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCCcchHHH------HHHHHccCCCCcc
Confidence            999999999986543  23345589999999999999988751 21245555532100000      000000 111111


Q ss_pred             cccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCC
Q 039049          151 YCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLL  194 (305)
Q Consensus       151 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~  194 (305)
                            ..-+.+.+..-++-...++..+++..-+.-..|.|...
T Consensus       172 ------~i~~~t~LDs~R~~~~la~~~~v~~~~V~~~~V~G~HG  209 (345)
T 4h7p_A          172 ------HVTAMTRLDHNRALSLLARKAGVPVSQVRNVIIWGNHS  209 (345)
T ss_dssp             ------GEEECCHHHHHHHHHHHHHHHTSCGGGEECCEEEBCSS
T ss_pred             ------eeeeccchhHHHHHHHHHHHHCcChhheecceeecCCC
Confidence                  22334445555555556677788777777666777643

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=97.44  E-value=0.00089  Score=56.40  Aligned_cols=113  Identities=17%  Similarity=0.088  Sum_probs=70.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC--eEEEEEeCCCcccchh-hhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH--MVRTTVRDPEDLSKVG-FLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      |||.|+|+ |.+|..++..|+..|+  +|++++++++...... .+...........+..   .|.    +.++++|+||
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~d~----~~~~~aDvVi   72 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA---GDY----ADLKGSDVVI   72 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE---CCG----GGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEe---CCH----HHhCCCCEEE
Confidence            57999998 9999999999999998  9999998764333211 1111000001112221   232    2467899999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEec
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS  124 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  124 (305)
                      -+++.....  .....+....|+.....+++.+.+...-..+|.+|
T Consensus        73 iav~~~~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~t  116 (319)
T 1a5z_A           73 VAAGVPQKP--GETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT  116 (319)
T ss_dssp             ECCCCCCCS--SCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EccCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            998875522  11233467888888899998887762222455543

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A

Probab=97.44  E-value=0.0015  Score=54.48  Aligned_cols=110  Identities=14%  Similarity=0.067  Sum_probs=71.1

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCC--eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGH--MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      |+||.|+|| |.+|..++..|+..|.  +|.+++++++.......+....  .++++.. .|      + +.++++|+||
T Consensus        14 ~~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~--~~~i~~t-~d------~-~~l~~aD~Vi   82 (303)
T 2i6t_A           14 VNKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFN--LPNVEIS-KD------L-SASAHSKVVI   82 (303)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHT--CTTEEEE-SC------G-GGGTTCSEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhc--CCCeEEe-CC------H-HHHCCCCEEE
Confidence            578999996 9999999999999998  9999998764221222222211  1234331 22      3 4478999999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEec
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS  124 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  124 (305)
                      -+++...+.   ....+....|+...+.+++.+.+...-..++.+|
T Consensus        83 ~aag~~~pG---~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~s  125 (303)
T 2i6t_A           83 FTVNSLGSS---QSYLDVVQSNVDMFRALVPALGHYSQHSVLLVAS  125 (303)
T ss_dssp             ECCCC-------CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECS
T ss_pred             EcCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcC
Confidence            999885322   2344578889999999999988862222444554

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=97.42  E-value=0.0006  Score=58.41  Aligned_cols=95  Identities=8%  Similarity=0.044  Sum_probs=54.0

Q ss_pred             CCcEEEeCCcchHHHHHHH-HHHHcCC---eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCE
Q 039049            1 MPEYCVTGGTGFIAAHLVK-ALLDKGH---MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDG   76 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~-~l~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   76 (305)
                      |+||.|.||+|++|+.|++ .|.+.++   +++.+..+.... ...   ...    +......|..+++.    +.++|+
T Consensus         1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G~-~v~---~~~----g~~i~~~~~~~~~~----~~~~Dv   68 (367)
T 1t4b_A            1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQ-AAP---SFG----GTTGTLQDAFDLEA----LKALDI   68 (367)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTS-BCC---GGG----TCCCBCEETTCHHH----HHTCSE
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCCC-Ccc---ccC----CCceEEEecCChHH----hcCCCE
Confidence            8899999999999999999 5554544   455554432111 110   000    11111223333333    358999


Q ss_pred             EEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCcc-EEEEeccc
Q 039049           77 VFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVK-RVVLTSSC  126 (305)
Q Consensus        77 Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~SS~  126 (305)
                      ||-|.+...                  +......+.+. |++ .+|=.||.
T Consensus        69 Vf~a~g~~~------------------s~~~a~~~~~~-G~k~vVID~ss~  100 (367)
T 1t4b_A           69 IVTCQGGDY------------------TNEIYPKLRES-GWQGYWIDAASS  100 (367)
T ss_dssp             EEECSCHHH------------------HHHHHHHHHHT-TCCCEEEECSST
T ss_pred             EEECCCchh------------------HHHHHHHHHHC-CCCEEEEcCChh
Confidence            998876532                  34555566666 775 45555553

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=97.42  E-value=8.1e-05  Score=62.58  Aligned_cols=36  Identities=19%  Similarity=0.233  Sum_probs=32.1

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCc
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPED   37 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~   37 (305)
                      ||+|.|+|+ |.+|+.++..|++.|++|++++|+++.
T Consensus         3 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~   38 (316)
T 2ew2_A            3 AMKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPAH   38 (316)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHHH
Confidence            679999996 999999999999999999999987653

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.41  E-value=0.00029  Score=60.08  Aligned_cols=74  Identities=20%  Similarity=0.175  Sum_probs=49.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCC-cchHHHHhc--CCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLM-EGSFDEAIQ--GVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~--~~d~Vi   78 (305)
                      ++|||+||+|.+|...++.+...|.+|+++.+++++......+    +  .. ..+..+ .+ .+.+.++..  ++|+||
T Consensus       161 ~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----g--a~-~v~~~~-~~~~~~v~~~~~~~g~Dvvi  232 (342)
T 4eye_A          161 ETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSV----G--AD-IVLPLE-EGWAKAVREATGGAGVDMVV  232 (342)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH----T--CS-EEEESS-TTHHHHHHHHTTTSCEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----C--Cc-EEecCc-hhHHHHHHHHhCCCCceEEE
Confidence            5799999999999999999999999999999987654332222    1  11 122222 22 122333333  589999


Q ss_pred             Eeccc
Q 039049           79 HTASP   83 (305)
Q Consensus        79 ~~a~~   83 (305)
                      ++++.
T Consensus       233 d~~g~  237 (342)
T 4eye_A          233 DPIGG  237 (342)
T ss_dssp             ESCC-
T ss_pred             ECCch
Confidence            99885

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=97.38  E-value=0.00083  Score=58.95  Aligned_cols=94  Identities=9%  Similarity=0.156  Sum_probs=61.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC-C---eEEEEEeCCCcccchhhhhhccCccCceEEEEccC--CCcch-HHHHhcCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG-H---MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADL--LMEGS-FDEAIQGV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g-~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~--~d~~~-~~~~~~~~   74 (305)
                      ++|+|+| .|.||+.++..|+++. .   +|++++...........    .    ++.+...++  .|.++ +.+++++.
T Consensus        14 ~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~----~----g~~~~~~~Vdadnv~~~l~aLl~~~   84 (480)
T 2ph5_A           14 NRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQ----Y----GVSFKLQQITPQNYLEVIGSTLEEN   84 (480)
T ss_dssp             SCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHH----H----TCEEEECCCCTTTHHHHTGGGCCTT
T ss_pred             CCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhh----c----CCceeEEeccchhHHHHHHHHhcCC
Confidence            6899999 6999999999999864 4   68888665443211111    1    334554444  44433 55677767


Q ss_pred             CEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccc
Q 039049           75 DGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSC  126 (305)
Q Consensus        75 d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~  126 (305)
                      |+|||++-...                  ...++++|.++ |+   -|++++
T Consensus        85 DvVIN~s~~~~------------------~l~Im~aclea-Gv---~YlDTa  114 (480)
T 2ph5_A           85 DFLIDVSIGIS------------------SLALIILCNQK-GA---LYINAA  114 (480)
T ss_dssp             CEEEECCSSSC------------------HHHHHHHHHHH-TC---EEEESS
T ss_pred             CEEEECCcccc------------------CHHHHHHHHHc-CC---CEEECC
Confidence            99998653322                  55788899998 64   455554

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=97.36  E-value=0.00043  Score=58.33  Aligned_cols=113  Identities=17%  Similarity=0.023  Sum_probs=70.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchh-hhhhc---cCccCceEEEEccCCCcchHHHHhcCCCE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVG-FLWEL---NGAEERLKIMKADLLMEGSFDEAIQGVDG   76 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~-~~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   76 (305)
                      ++|.|+|+ |.+|..++..|+..|+ +|++++++++...... .+...   .....++... .   |   + +.++++|+
T Consensus         5 ~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t-~---d---~-~a~~~aDi   75 (317)
T 2ewd_A            5 RKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGT-D---D---Y-ADISGSDV   75 (317)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE-S---C---G-GGGTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEEC-C---C---H-HHhCCCCE
Confidence            58999998 9999999999999998 9999999875443210 11110   0001122211 1   2   3 35678999


Q ss_pred             EEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEecc
Q 039049           77 VFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSS  125 (305)
Q Consensus        77 Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS  125 (305)
                      ||-+++...... . ...+....|......+++.+.+...-..+|.+|.
T Consensus        76 Vi~avg~p~~~g-~-~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sN  122 (317)
T 2ewd_A           76 VIITASIPGRPK-D-DRSELLFGNARILDSVAEGVKKYCPNAFVICITN  122 (317)
T ss_dssp             EEECCCCSSCCS-S-CGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             EEEeCCCCCCCC-C-cHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence            999998654321 1 2233556677777888888777623224555553

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.35  E-value=0.00023  Score=58.78  Aligned_cols=78  Identities=17%  Similarity=0.219  Sum_probs=53.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ++++|+|+ |.+|+.++..|++.|. +|++.+|+.++..........  ....+.+...++   +++.+.+.++|+|||+
T Consensus       128 k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~--~~~~~~i~~~~~---~~l~~~l~~~DiVIna  201 (283)
T 3jyo_A          128 DSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINN--AVGREAVVGVDA---RGIEDVIAAADGVVNA  201 (283)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHH--HHTSCCEEEECS---TTHHHHHHHSSEEEEC
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHh--hcCCceEEEcCH---HHHHHHHhcCCEEEEC
Confidence            68999997 9999999999999998 799999987654432211110  011223333333   3466777789999999


Q ss_pred             ccccc
Q 039049           81 ASPVL   85 (305)
Q Consensus        81 a~~~~   85 (305)
                      .....
T Consensus       202 Tp~Gm  206 (283)
T 3jyo_A          202 TPMGM  206 (283)
T ss_dssp             SSTTS
T ss_pred             CCCCC
Confidence            87644

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=97.35  E-value=0.00031  Score=58.96  Aligned_cols=66  Identities=20%  Similarity=0.125  Sum_probs=46.9

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ||+|.|+| .|.+|..+++.|++.|++|++.+|++++.......        ++..       ..+..++++++|+||-+
T Consensus        21 m~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~--------g~~~-------~~~~~~~~~~aDvvi~~   84 (310)
T 3doj_A           21 MMEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEH--------GASV-------CESPAEVIKKCKYTIAM   84 (310)
T ss_dssp             SCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHT--------TCEE-------CSSHHHHHHHCSEEEEC
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC--------CCeE-------cCCHHHHHHhCCEEEEE
Confidence            68999998 59999999999999999999999987654332211        1111       22345556667777766


Q ss_pred             cc
Q 039049           81 AS   82 (305)
Q Consensus        81 a~   82 (305)
                      ..
T Consensus        85 vp   86 (310)
T 3doj_A           85 LS   86 (310)
T ss_dssp             CS
T ss_pred             cC
Confidence            53

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=97.35  E-value=0.00021  Score=59.28  Aligned_cols=66  Identities=18%  Similarity=0.262  Sum_probs=47.0

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      +|+|.|+|. |.+|+.+++.|++.|++|++.+|++++.......        ++.       -..++.++++++|+||-+
T Consensus         1 s~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~--------g~~-------~~~~~~~~~~~aDvvi~~   64 (287)
T 3pef_A            1 SQKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAAL--------GAE-------RAATPCEVVESCPVTFAM   64 (287)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHT--------TCE-------ECSSHHHHHHHCSEEEEC
T ss_pred             CCEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC--------CCe-------ecCCHHHHHhcCCEEEEE
Confidence            478999995 9999999999999999999999987654332211        111       123455666677888866


Q ss_pred             cc
Q 039049           81 AS   82 (305)
Q Consensus        81 a~   82 (305)
                      ..
T Consensus        65 vp   66 (287)
T 3pef_A           65 LA   66 (287)
T ss_dssp             CS
T ss_pred             cC
Confidence            54

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=97.33  E-value=0.00017  Score=59.90  Aligned_cols=66  Identities=20%  Similarity=0.236  Sum_probs=47.2

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ||+|.|+| .|.+|+.+++.|++.|++|++.+|++++.......        ++..       ..+..++++++|+||-+
T Consensus         1 M~~I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~--------g~~~-------~~~~~~~~~~advvi~~   64 (287)
T 3pdu_A            1 MTTYGFLG-LGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVAL--------GARQ-------ASSPAEVCAACDITIAM   64 (287)
T ss_dssp             CCCEEEEC-CSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHH--------TCEE-------CSCHHHHHHHCSEEEEC
T ss_pred             CCeEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC--------CCee-------cCCHHHHHHcCCEEEEE
Confidence            88999998 69999999999999999999999987654432211        1111       12345555667777766


Q ss_pred             cc
Q 039049           81 AS   82 (305)
Q Consensus        81 a~   82 (305)
                      ..
T Consensus        65 v~   66 (287)
T 3pdu_A           65 LA   66 (287)
T ss_dssp             CS
T ss_pred             cC
Confidence            54

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.33  E-value=0.00024  Score=59.38  Aligned_cols=72  Identities=19%  Similarity=0.122  Sum_probs=50.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      .+|+|+||+|.+|...++.+...|.+|+++.+++++......+        +...+ .|..+.+++.+.+.++|+||+ +
T Consensus       127 ~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~--------ga~~~-~~~~~~~~~~~~~~~~d~vid-~  196 (302)
T 1iz0_A          127 EKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLAL--------GAEEA-ATYAEVPERAKAWGGLDLVLE-V  196 (302)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHT--------TCSEE-EEGGGHHHHHHHTTSEEEEEE-C
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc--------CCCEE-EECCcchhHHHHhcCceEEEE-C
Confidence            5799999999999999999999999999999976644322211        11211 243331234444478999999 7


Q ss_pred             cc
Q 039049           82 SP   83 (305)
Q Consensus        82 ~~   83 (305)
                      +.
T Consensus       197 g~  198 (302)
T 1iz0_A          197 RG  198 (302)
T ss_dssp             SC
T ss_pred             CH
Confidence            65

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=97.32  E-value=0.00017  Score=61.72  Aligned_cols=78  Identities=15%  Similarity=0.156  Sum_probs=49.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      |+|.|+|+ |.+|..++..|++.|++|++.+|+++...........+...+++.. ...+.-..++.++++++|+||-+.
T Consensus        30 mkI~VIGa-G~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l-~~~i~~t~d~~ea~~~aDvVilaV  107 (356)
T 3k96_A           30 HPIAILGA-GSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPF-PETLKAYCDLKASLEGVTDILIVV  107 (356)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCC-CTTEEEESCHHHHHTTCCEEEECC
T ss_pred             CeEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCcc-CCCeEEECCHHHHHhcCCEEEECC
Confidence            68999996 9999999999999999999999986543322211100101112111 111111234667788899999764

>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A

Probab=97.32  E-value=0.00071  Score=49.57  Aligned_cols=31  Identities=19%  Similarity=0.113  Sum_probs=27.3

Q ss_pred             CcEEEeCCc---chHHHHHHHHHHHcCCeEEEEE
Q 039049            2 PEYCVTGGT---GFIAAHLVKALLDKGHMVRTTV   32 (305)
Q Consensus         2 ~~ilItG~~---G~iG~~l~~~l~~~g~~V~~~~   32 (305)
                      ++|+|+|++   |-+|..+++.|.+.|++|+.++
T Consensus        14 ~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vn   47 (140)
T 1iuk_A           14 KTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVN   47 (140)
T ss_dssp             CEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEEC
T ss_pred             CEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeC
Confidence            579999998   8899999999999999866653

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=97.31  E-value=0.00046  Score=58.90  Aligned_cols=31  Identities=19%  Similarity=0.279  Sum_probs=26.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC-CeEEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG-HMVRTTV   32 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~   32 (305)
                      +||.|.||+|++|+.+++.|.+.. .++.++.
T Consensus         5 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai~   36 (350)
T 2ep5_A            5 IKVSLLGSTGMVGQKMVKMLAKHPYLELVKVS   36 (350)
T ss_dssp             EEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             cEEEEECcCCHHHHHHHHHHHhCCCcEEEEEe
Confidence            579999999999999999998764 4788886

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=97.30  E-value=0.00024  Score=62.67  Aligned_cols=82  Identities=17%  Similarity=0.166  Sum_probs=50.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEE-E-----EccCCCcchHHHHhcCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKI-M-----KADLLMEGSFDEAIQGVD   75 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~-----~~D~~d~~~~~~~~~~~d   75 (305)
                      |+|.|+| +|++|..++..|++.|++|++++|++++......- ..+...+.+.- +     .+.+....++.++++++|
T Consensus         1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~-~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aD   78 (436)
T 1mv8_A            1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQG-KSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSD   78 (436)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT-CCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCS
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCC-CCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCC
Confidence            5799999 69999999999999999999999876543322110 00000000000 0     011111234556677899


Q ss_pred             EEEEeccccc
Q 039049           76 GVFHTASPVL   85 (305)
Q Consensus        76 ~Vi~~a~~~~   85 (305)
                      +||-+.....
T Consensus        79 vviiaVptp~   88 (436)
T 1mv8_A           79 VSFICVGTPS   88 (436)
T ss_dssp             EEEECCCCCB
T ss_pred             EEEEEcCCCc
Confidence            9999886543

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=97.29  E-value=0.00084  Score=58.01  Aligned_cols=69  Identities=14%  Similarity=0.186  Sum_probs=53.4

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ||+|+|+|+ |.+|+.+++.|.+.|++|+++..++.....  .+        .-.++..|..|.+.+.++++++|.|+..
T Consensus         1 M~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~--~~--------~~~~~~~~~~d~~~l~~~~~~~d~v~~~   69 (380)
T 3ax6_A            1 MKKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTPRSPAG--QV--------ADEQIVAGFFDSERIEDLVKGSDVTTYD   69 (380)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTG--GG--------SSEEEECCTTCHHHHHHHHHTCSEEEES
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchh--hh--------CceEEECCCCCHHHHHHHHhcCCEEEec
Confidence            899999997 899999999999999999999876543211  01        1135567888888888888889998853

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=97.28  E-value=0.00026  Score=56.32  Aligned_cols=67  Identities=19%  Similarity=0.160  Sum_probs=45.8

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEE-EEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRT-TVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFH   79 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~   79 (305)
                      ||+|.|+| +|.+|..+++.|++.|++|++ .+|++++......   ..    ++....       ...+.++++|+||-
T Consensus        23 mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~---~~----g~~~~~-------~~~~~~~~aDvVil   87 (220)
T 4huj_A           23 MTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLSSVTD---RF----GASVKA-------VELKDALQADVVIL   87 (220)
T ss_dssp             SCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHH---HH----TTTEEE-------CCHHHHTTSSEEEE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHH---Hh----CCCccc-------ChHHHHhcCCEEEE
Confidence            57999999 699999999999999999999 7777654333211   10    111111       12234678999998


Q ss_pred             ecc
Q 039049           80 TAS   82 (305)
Q Consensus        80 ~a~   82 (305)
                      +..
T Consensus        88 avp   90 (220)
T 4huj_A           88 AVP   90 (220)
T ss_dssp             ESC
T ss_pred             eCC
Confidence            763

>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}

Probab=97.27  E-value=0.00032  Score=61.40  Aligned_cols=83  Identities=19%  Similarity=0.190  Sum_probs=51.2

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEE-----E-EccCCCcchHHHHhcCC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKI-----M-KADLLMEGSFDEAIQGV   74 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-----~-~~D~~d~~~~~~~~~~~   74 (305)
                      |.+|.|+| .||+|..++..|++.|++|++++.++++-.....-. .+...+++.-     + .+.+.-..+..+++..+
T Consensus        21 m~~IaViG-lGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~-~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~a   98 (444)
T 3vtf_A           21 MASLSVLG-LGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGR-PHIYEPGLEEALGRALSSGRLSFAESAEEAVAAT   98 (444)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTC-CSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHTS
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCC-CCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhcC
Confidence            67899998 699999999999999999999988765433221100 0000000000     0 01111123455667788


Q ss_pred             CEEEEeccccc
Q 039049           75 DGVFHTASPVL   85 (305)
Q Consensus        75 d~Vi~~a~~~~   85 (305)
                      |++|-|.+...
T Consensus        99 d~~~I~VpTP~  109 (444)
T 3vtf_A           99 DATFIAVGTPP  109 (444)
T ss_dssp             SEEEECCCCCB
T ss_pred             CceEEEecCCC
Confidence            99998887644

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.27  E-value=0.00026  Score=59.91  Aligned_cols=73  Identities=15%  Similarity=0.047  Sum_probs=50.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcch---HHHHhc--CCCE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGS---FDEAIQ--GVDG   76 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~---~~~~~~--~~d~   76 (305)
                      ++|+|+||+|.+|...++.+...|.+|+++++++++......+        +... ..|..+.+.   +.++..  ++|+
T Consensus       142 ~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~--------Ga~~-~~~~~~~~~~~~~~~~~~~~g~Dv  212 (325)
T 3jyn_A          142 EIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKAL--------GAWE-TIDYSHEDVAKRVLELTDGKKCPV  212 (325)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH--------TCSE-EEETTTSCHHHHHHHHTTTCCEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc--------CCCE-EEeCCCccHHHHHHHHhCCCCceE
Confidence            5799999999999999999999999999999876543322221        1111 124444332   333332  6899


Q ss_pred             EEEeccc
Q 039049           77 VFHTASP   83 (305)
Q Consensus        77 Vi~~a~~   83 (305)
                      ||++++.
T Consensus       213 vid~~g~  219 (325)
T 3jyn_A          213 VYDGVGQ  219 (325)
T ss_dssp             EEESSCG
T ss_pred             EEECCCh
Confidence            9999885

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.27  E-value=0.00046  Score=58.71  Aligned_cols=73  Identities=11%  Similarity=0.009  Sum_probs=51.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcch---HHHHhc--CCCE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGS---FDEAIQ--GVDG   76 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~---~~~~~~--~~d~   76 (305)
                      ++|+|+||+|.+|...++.+...|.+|+++++++++......+        +...+ .|..+.+.   +.++..  ++|+
T Consensus       146 ~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l--------ga~~~-~~~~~~~~~~~~~~~~~~~g~Dv  216 (340)
T 3gms_A          146 DVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRL--------GAAYV-IDTSTAPLYETVMELTNGIGADA  216 (340)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH--------TCSEE-EETTTSCHHHHHHHHTTTSCEEE
T ss_pred             CEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhC--------CCcEE-EeCCcccHHHHHHHHhCCCCCcE
Confidence            5799999999999999999988999999999988755433222        11211 24444332   333332  6899


Q ss_pred             EEEeccc
Q 039049           77 VFHTASP   83 (305)
Q Consensus        77 Vi~~a~~   83 (305)
                      ||+++|.
T Consensus       217 vid~~g~  223 (340)
T 3gms_A          217 AIDSIGG  223 (340)
T ss_dssp             EEESSCH
T ss_pred             EEECCCC
Confidence            9999876

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.25  E-value=0.00031  Score=59.95  Aligned_cols=73  Identities=15%  Similarity=0.134  Sum_probs=50.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHc-CCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcch---HHHHh--cCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDK-GHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGS---FDEAI--QGVD   75 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~---~~~~~--~~~d   75 (305)
                      ++|+|+||+|-||..+++.+... |.+|+++++++++......+        +... ..|..+.+.   +.++.  .++|
T Consensus       172 ~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~--------g~~~-~~~~~~~~~~~~~~~~~~~~~~d  242 (347)
T 1jvb_A          172 KTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA--------GADY-VINASMQDPLAEIRRITESKGVD  242 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH--------TCSE-EEETTTSCHHHHHHHHTTTSCEE
T ss_pred             CEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh--------CCCE-EecCCCccHHHHHHHHhcCCCce
Confidence            57999999889999999999998 99999999876543322211        1111 124444333   44444  3689


Q ss_pred             EEEEeccc
Q 039049           76 GVFHTASP   83 (305)
Q Consensus        76 ~Vi~~a~~   83 (305)
                      +||++++.
T Consensus       243 ~vi~~~g~  250 (347)
T 1jvb_A          243 AVIDLNNS  250 (347)
T ss_dssp             EEEESCCC
T ss_pred             EEEECCCC
Confidence            99999985

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=97.25  E-value=0.0014  Score=55.90  Aligned_cols=118  Identities=17%  Similarity=0.127  Sum_probs=71.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC--e---EEEEEeCCCcccc-h-hhhhhccCcc-CceEEEEccCCCcchHHHHhcC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH--M---VRTTVRDPEDLSK-V-GFLWELNGAE-ERLKIMKADLLMEGSFDEAIQG   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~--~---V~~~~r~~~~~~~-~-~~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~~   73 (305)
                      +||.|+||+|.||.+++-.|+..+.  +   +.+...+...... . .....+.+.. +-...+..  .  ..-.+.+++
T Consensus        33 ~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i--~--~~~y~~~~d  108 (375)
T 7mdh_A           33 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSI--G--IDPYEVFED  108 (375)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE--E--SCHHHHTTT
T ss_pred             CEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEE--e--cCCHHHhCC
Confidence            4799999999999999999988763  2   6665444332111 0 0011111111 11111111  1  123567889


Q ss_pred             CCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhc-CCccEEEEecc
Q 039049           74 VDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKA-KSVKRVVLTSS  125 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS  125 (305)
                      +|+||-+||....+  .....+.++.|+...+.+.+.+.+. +.-..++.+|-
T Consensus       109 aDvVVitag~prkp--G~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsN  159 (375)
T 7mdh_A          109 VDWALLIGAKPRGP--GMERAALLDINGQIFADQGKALNAVASKNVKVLVVGN  159 (375)
T ss_dssp             CSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             CCEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecC
Confidence            99999998875422  2345568899999999999998874 22235666653

>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*

Probab=97.22  E-value=0.0012  Score=56.55  Aligned_cols=70  Identities=19%  Similarity=0.219  Sum_probs=50.9

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccC-CCcchHHHHhcCCCEEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADL-LMEGSFDEAIQGVDGVFH   79 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~d~~~~~~~~~~~d~Vi~   79 (305)
                      ||||+|+|| |..|..++..+.+.|++|++++.++......  +      . . +++..|. .|.+.+....+++|+|+-
T Consensus         1 MK~I~ilGg-g~~g~~~~~~Ak~~G~~vv~vd~~~~~~~~~--~------a-D-~~~~~~~~~d~~~~~~~~~~~D~v~~   69 (363)
T 4ffl_A            1 MKTICLVGG-KLQGFEAAYLSKKAGMKVVLVDKNPQALIRN--Y------A-D-EFYCFDVIKEPEKLLELSKRVDAVLP   69 (363)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTTT--T------S-S-EEEECCTTTCHHHHHHHHTSSSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCChhHh--h------C-C-EEEECCCCcCHHHHHHHhcCCCEEEE
Confidence            999999996 8999999999999999999998776533210  0      0 1 3445554 455666666778999875


Q ss_pred             ec
Q 039049           80 TA   81 (305)
Q Consensus        80 ~a   81 (305)
                      ..
T Consensus        70 ~~   71 (363)
T 4ffl_A           70 VN   71 (363)
T ss_dssp             CC
T ss_pred             CC
Confidence            43

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=97.22  E-value=0.00088  Score=57.86  Aligned_cols=68  Identities=13%  Similarity=0.141  Sum_probs=52.9

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFH   79 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~   79 (305)
                      |++|+|+|+ |.+|+.+++.+.+.|++|++++.++.....  ..        --.++..|..|.+.+.++.+++|+|.-
T Consensus        12 ~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~~--~~--------ad~~~~~~~~d~~~l~~~~~~~dvi~~   79 (377)
T 3orq_A           12 GATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPCR--YV--------AHEFIQAKYDDEKALNQLGQKCDVITY   79 (377)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTG--GG--------SSEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhh--hh--------CCEEEECCCCCHHHHHHHHHhCCccee
Confidence            368999996 999999999999999999999876542211  11        114667899999999998888998753

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.21  E-value=0.00042  Score=57.75  Aligned_cols=74  Identities=16%  Similarity=0.121  Sum_probs=51.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ++++|+|+ |.+|+.++..|++.|. +|++.+|+.++.....   .....  ...    +..+.+.+.+.+.++|+||++
T Consensus       142 ~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la---~~~~~--~~~----~~~~~~~~~~~~~~aDivIn~  211 (297)
T 2egg_A          142 KRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLV---REGDE--RRS----AYFSLAEAETRLAEYDIIINT  211 (297)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHH---HHSCS--SSC----CEECHHHHHHTGGGCSEEEEC
T ss_pred             CEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH---HHhhh--ccC----ceeeHHHHHhhhccCCEEEEC
Confidence            68999997 8899999999999997 9999999865433221   11110  000    111224566677889999999


Q ss_pred             ccccc
Q 039049           81 ASPVL   85 (305)
Q Consensus        81 a~~~~   85 (305)
                      .+...
T Consensus       212 t~~~~  216 (297)
T 2egg_A          212 TSVGM  216 (297)
T ss_dssp             SCTTC
T ss_pred             CCCCC
Confidence            98765

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.20  E-value=0.0016  Score=57.66  Aligned_cols=98  Identities=21%  Similarity=0.226  Sum_probs=68.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHH-hcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEA-IQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~Vi~~   80 (305)
                      ++|+|.|| |-+|.++++.| .++++|.++-++++.......      ..++..++.+|.+|.+-+.+. ++++|++|-+
T Consensus       236 ~~v~I~Gg-G~ig~~lA~~L-~~~~~v~iIE~d~~r~~~la~------~l~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~  307 (461)
T 4g65_A          236 RRIMIVGG-GNIGASLAKRL-EQTYSVKLIERNLQRAEKLSE------ELENTIVFCGDAADQELLTEENIDQVDVFIAL  307 (461)
T ss_dssp             CEEEEECC-SHHHHHHHHHH-TTTSEEEEEESCHHHHHHHHH------HCTTSEEEESCTTCHHHHHHTTGGGCSEEEEC
T ss_pred             cEEEEEcc-hHHHHHHHHHh-hhcCceEEEecCHHHHHHHHH------HCCCceEEeccccchhhHhhcCchhhcEEEEc
Confidence            57999997 99999999988 456899999877654433221      123678999999999877765 5789999955


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEecc
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSS  125 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS  125 (305)
                      -+.        +     +.|+.    ....|++. |++|+|-.-.
T Consensus       308 T~~--------D-----e~Ni~----~~llAk~~-gv~kvIa~vn  334 (461)
T 4g65_A          308 TNE--------D-----ETNIM----SAMLAKRM-GAKKVMVLIQ  334 (461)
T ss_dssp             CSC--------H-----HHHHH----HHHHHHHT-TCSEEEEECS
T ss_pred             ccC--------c-----HHHHH----HHHHHHHc-CCcccccccc
Confidence            322        2     23332    22346777 8898876544

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.19  E-value=0.00058  Score=56.13  Aligned_cols=68  Identities=9%  Similarity=0.105  Sum_probs=49.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ++++|+|+ |.+|+.++..|++.|. +|++.+|+.++......         .+...     ..+++.+++.++|+|||+
T Consensus       118 k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~---------~~~~~-----~~~~~~~~~~~aDiVIna  182 (277)
T 3don_A          118 AYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL---------NINKI-----NLSHAESHLDEFDIIINT  182 (277)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS---------CCEEE-----CHHHHHHTGGGCSEEEEC
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH---------hcccc-----cHhhHHHHhcCCCEEEEC
Confidence            68999996 8999999999999998 89999998765433210         12211     234466667789999999


Q ss_pred             cccc
Q 039049           81 ASPV   84 (305)
Q Consensus        81 a~~~   84 (305)
                      ....
T Consensus       183 Tp~G  186 (277)
T 3don_A          183 TPAG  186 (277)
T ss_dssp             CC--
T ss_pred             ccCC
Confidence            7654

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=97.19  E-value=0.00075  Score=57.59  Aligned_cols=33  Identities=15%  Similarity=0.197  Sum_probs=26.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC-CeEEEEEeC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG-HMVRTTVRD   34 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~r~   34 (305)
                      ++|.|+||||++|..|++.|.+.. .++..+..+
T Consensus         8 ~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~   41 (359)
T 4dpl_A            8 LKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGK   41 (359)
T ss_dssp             EEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEES
T ss_pred             CeEEEECCCCHHHHHHHHHHHhCCCceEEEEECc
Confidence            379999999999999999887654 367666543

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=97.19  E-value=0.00075  Score=57.59  Aligned_cols=33  Identities=15%  Similarity=0.197  Sum_probs=26.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC-CeEEEEEeC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG-HMVRTTVRD   34 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~r~   34 (305)
                      ++|.|+||||++|..|++.|.+.. .++..+..+
T Consensus         8 ~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~   41 (359)
T 4dpk_A            8 LKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGK   41 (359)
T ss_dssp             EEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEES
T ss_pred             CeEEEECCCCHHHHHHHHHHHhCCCceEEEEECc
Confidence            379999999999999999887654 367666543

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.18  E-value=0.00047  Score=59.32  Aligned_cols=70  Identities=11%  Similarity=0.114  Sum_probs=48.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCC---CcccchhhhhhccCccCceEEEEccCCC--cchHHHHhcCCCE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDP---EDLSKVGFLWELNGAEERLKIMKADLLM--EGSFDEAIQGVDG   76 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~d~   76 (305)
                      ++|+|+|+ |.+|..+++.+...|.+|+++++++   ++......+        ++..+  | .+  .+.+.+.-.++|+
T Consensus       182 ~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~--------ga~~v--~-~~~~~~~~~~~~~~~d~  249 (366)
T 2cdc_A          182 RKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEET--------KTNYY--N-SSNGYDKLKDSVGKFDV  249 (366)
T ss_dssp             CEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHH--------TCEEE--E-CTTCSHHHHHHHCCEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHh--------CCcee--c-hHHHHHHHHHhCCCCCE
Confidence            57999999 9999999999999999999999987   432211111        23333  4 43  1223321247999


Q ss_pred             EEEeccc
Q 039049           77 VFHTASP   83 (305)
Q Consensus        77 Vi~~a~~   83 (305)
                      ||++++.
T Consensus       250 vid~~g~  256 (366)
T 2cdc_A          250 IIDATGA  256 (366)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999986

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.18  E-value=0.00086  Score=57.23  Aligned_cols=72  Identities=13%  Similarity=0.070  Sum_probs=48.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcc---hHHHHhc--CCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG---SFDEAIQ--GVD   75 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~~~~~~~--~~d   75 (305)
                      .+|||+|+ |.+|...++.+...|. +|++++|++++......+        +...+ .|..+.+   .+.++..  ++|
T Consensus       169 ~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~--------Ga~~~-~~~~~~~~~~~v~~~~~g~g~D  238 (348)
T 2d8a_A          169 KSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV--------GADYV-INPFEEDVVKEVMDITDGNGVD  238 (348)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHH--------TCSEE-ECTTTSCHHHHHHHHTTTSCEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh--------CCCEE-ECCCCcCHHHHHHHHcCCCCCC
Confidence            57999999 9999999999999998 999999876543322211        12211 2444333   2333322  689


Q ss_pred             EEEEeccc
Q 039049           76 GVFHTASP   83 (305)
Q Consensus        76 ~Vi~~a~~   83 (305)
                      +||++++.
T Consensus       239 ~vid~~g~  246 (348)
T 2d8a_A          239 VFLEFSGA  246 (348)
T ss_dssp             EEEECSCC
T ss_pred             EEEECCCC
Confidence            99999875

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.17  E-value=0.00077  Score=57.31  Aligned_cols=72  Identities=21%  Similarity=0.113  Sum_probs=49.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcc---hHHHHhcCCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG---SFDEAIQGVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~~~~~~~~~d~Vi   78 (305)
                      ++|||+|+ |.+|..+++.+...|.+|+++.|++++......+        +... ..|..+.+   .+.++..++|+||
T Consensus       166 ~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l--------Ga~~-~~d~~~~~~~~~~~~~~~~~d~vi  235 (339)
T 1rjw_A          166 EWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKEL--------GADL-VVNPLKEDAAKFMKEKVGGVHAAV  235 (339)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT--------TCSE-EECTTTSCHHHHHHHHHSSEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHC--------CCCE-EecCCCccHHHHHHHHhCCCCEEE
Confidence            57999999 7799999999999999999999876543322111        1222 23555432   2223235799999


Q ss_pred             Eeccc
Q 039049           79 HTASP   83 (305)
Q Consensus        79 ~~a~~   83 (305)
                      ++++.
T Consensus       236 d~~g~  240 (339)
T 1rjw_A          236 VTAVS  240 (339)
T ss_dssp             ESSCC
T ss_pred             ECCCC
Confidence            99875

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=97.15  E-value=0.00054  Score=55.09  Aligned_cols=33  Identities=15%  Similarity=0.206  Sum_probs=27.7

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEE-EeC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTT-VRD   34 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~-~r~   34 (305)
                      |+||.|+|+ |.+|+.+++.+.+.++++.+. +|+
T Consensus         3 MmkI~ViGa-GrMG~~i~~~l~~~~~eLva~~d~~   36 (243)
T 3qy9_A            3 SMKILLIGY-GAMNQRVARLAEEKGHEIVGVIENT   36 (243)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred             ceEEEEECc-CHHHHHHHHHHHhCCCEEEEEEecC
Confidence            689999999 999999999999887776664 444

>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}

Probab=97.14  E-value=0.00091  Score=49.31  Aligned_cols=34  Identities=21%  Similarity=0.223  Sum_probs=29.3

Q ss_pred             CcEEEeCCc---chHHHHHHHHHHHcCCeEEEEEeCC
Q 039049            2 PEYCVTGGT---GFIAAHLVKALLDKGHMVRTTVRDP   35 (305)
Q Consensus         2 ~~ilItG~~---G~iG~~l~~~l~~~g~~V~~~~r~~   35 (305)
                      ++|.|+|++   |-+|..+++.|.+.|++|+.++.+.
T Consensus        14 ~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~   50 (145)
T 2duw_A           14 RTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKV   50 (145)
T ss_dssp             CCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSS
T ss_pred             CEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCcc
Confidence            579999998   8899999999999999977775543

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=97.11  E-value=0.0052  Score=51.36  Aligned_cols=112  Identities=18%  Similarity=0.162  Sum_probs=72.5

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccc-hhhhhhcc-CccCceEEEE-ccCCCcchHHHHhcCCCEEE
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSK-VGFLWELN-GAEERLKIMK-ADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~-~~~~~~~~-~~~~~~~~~~-~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      ||.|+|| |.+|..++..|+..|. +|.++++++++... ...+.... .......+.. .|      . +.++++|+||
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d------~-~a~~~aD~Vi   72 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNS------Y-EDMRGSDIVL   72 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESC------G-GGGTTCSEEE
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCC------H-HHhCCCCEEE
Confidence            6899998 9999999999988887 79999988654432 11111110 0011222222 22      2 3578999999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEec
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS  124 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  124 (305)
                      ..++.....  .....+....|+...+.+++.+.+...-..+|.+|
T Consensus        73 ~~ag~~~k~--G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  116 (308)
T 2d4a_B           73 VTAGIGRKP--GMTREQLLEANANTMADLAEKIKAYAKDAIVVITT  116 (308)
T ss_dssp             ECCSCCCCS--SCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EeCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence            999875533  22334568899999999999988762222555554

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.10  E-value=0.00079  Score=57.90  Aligned_cols=74  Identities=18%  Similarity=0.078  Sum_probs=52.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      .+|||+|+ |-||...++.+...|.+|+++++++++.....   ...    +... ..|..+.+.+.++..++|+||+++
T Consensus       189 ~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~---~~l----Ga~~-v~~~~~~~~~~~~~~~~D~vid~~  259 (366)
T 1yqd_A          189 KHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEAL---KNF----GADS-FLVSRDQEQMQAAAGTLDGIIDTV  259 (366)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHH---HTS----CCSE-EEETTCHHHHHHTTTCEEEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---Hhc----CCce-EEeccCHHHHHHhhCCCCEEEECC
Confidence            57999996 99999999999999999999998865432211   011    1111 135555556666666899999998


Q ss_pred             ccc
Q 039049           82 SPV   84 (305)
Q Consensus        82 ~~~   84 (305)
                      +..
T Consensus       260 g~~  262 (366)
T 1yqd_A          260 SAV  262 (366)
T ss_dssp             SSC
T ss_pred             CcH
Confidence            863

>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}

Probab=97.10  E-value=0.0011  Score=56.10  Aligned_cols=28  Identities=21%  Similarity=0.348  Sum_probs=24.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVR   29 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~   29 (305)
                      |||.|.||+|++|+.|++.|.++++.+.
T Consensus         1 mkVaI~GAtG~iG~~llr~L~~~~~~~~   28 (331)
T 2yv3_A            1 MRVAVVGATGAVGREILKVLEARNFPLS   28 (331)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcE
Confidence            5799999999999999999997776543

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=97.09  E-value=0.00048  Score=51.58  Aligned_cols=75  Identities=12%  Similarity=0.012  Sum_probs=50.4

Q ss_pred             cchHHHHHHHHHHHcCCeEEEEEeCCCcccchhh-hhhccCccCceEEEEccCCCc--chHHHHhc------CCCEEEEe
Q 039049           10 TGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGF-LWELNGAEERLKIMKADLLME--GSFDEAIQ------GVDGVFHT   80 (305)
Q Consensus        10 ~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~--~~~~~~~~------~~d~Vi~~   80 (305)
                      +|.++...++.|++.|.+|++..|+......... .......+.++..+++|+.++  +++.++++      +-|++|||
T Consensus        25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~dVLVnn  104 (157)
T 3gxh_A           25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGKDVLVHC  104 (157)
T ss_dssp             EBCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTSCEEEEC
T ss_pred             cCCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCCCEEEEC
Confidence            3678899999999999999988776543221100 111111133567778999998  77776653      23999999


Q ss_pred             cccc
Q 039049           81 ASPV   84 (305)
Q Consensus        81 a~~~   84 (305)
                      ||..
T Consensus       105 Agg~  108 (157)
T 3gxh_A          105 LANY  108 (157)
T ss_dssp             SBSH
T ss_pred             CCCC
Confidence            9873

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=97.07  E-value=0.0051  Score=56.07  Aligned_cols=68  Identities=16%  Similarity=0.146  Sum_probs=56.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHH-hcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEA-IQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~Vi~~   80 (305)
                      ++|+|+|+ |-+|+++++.|.+.|++|+++.++++.....           . .++.+|.+|.+.++++ ++++|.+|-+
T Consensus       349 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~-----------~-~~i~gD~t~~~~L~~agi~~ad~vi~~  415 (565)
T 4gx0_A          349 ELIFIIGH-GRIGCAAAAFLDRKPVPFILIDRQESPVCND-----------H-VVVYGDATVGQTLRQAGIDRASGIIVT  415 (565)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCEEEEESSCCSSCCS-----------S-CEEESCSSSSTHHHHHTTTSCSEEEEC
T ss_pred             CCEEEECC-CHHHHHHHHHHHHCCCCEEEEECChHHHhhc-----------C-CEEEeCCCCHHHHHhcCccccCEEEEE
Confidence            47999997 9999999999999999999999988754321           1 7899999999988876 4689999866


Q ss_pred             cc
Q 039049           81 AS   82 (305)
Q Consensus        81 a~   82 (305)
                      .+
T Consensus       416 ~~  417 (565)
T 4gx0_A          416 TN  417 (565)
T ss_dssp             CS
T ss_pred             CC
Confidence            43

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=97.06  E-value=0.00078  Score=56.81  Aligned_cols=66  Identities=17%  Similarity=0.197  Sum_probs=47.8

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ||+|.|+|. |.+|..+++.|++.|++|++.+|++++.......        ++..       ..++.++++++|+||-+
T Consensus        31 ~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~--------g~~~-------~~~~~e~~~~aDvVi~~   94 (320)
T 4dll_A           31 ARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAAL--------GATI-------HEQARAAARDADIVVSM   94 (320)
T ss_dssp             CSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT--------TCEE-------ESSHHHHHTTCSEEEEC
T ss_pred             CCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHC--------CCEe-------eCCHHHHHhcCCEEEEE
Confidence            468999985 9999999999999999999999887643322111        2211       23466777788988877


Q ss_pred             cc
Q 039049           81 AS   82 (305)
Q Consensus        81 a~   82 (305)
                      ..
T Consensus        95 vp   96 (320)
T 4dll_A           95 LE   96 (320)
T ss_dssp             CS
T ss_pred             CC
Confidence            54

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.06  E-value=0.00033  Score=60.52  Aligned_cols=74  Identities=14%  Similarity=0.094  Sum_probs=52.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      ++|+|+|+ |-||+.+++.+...|.+|++.+|++.+......   ..+  ..+.   .+..+.+.+.+++.++|+||+++
T Consensus       169 ~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~---~~g--~~~~---~~~~~~~~l~~~l~~aDvVi~~~  239 (377)
T 2vhw_A          169 ADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDA---EFC--GRIH---TRYSSAYELEGAVKRADLVIGAV  239 (377)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HTT--TSSE---EEECCHHHHHHHHHHCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH---hcC--CeeE---eccCCHHHHHHHHcCCCEEEECC
Confidence            68999998 999999999999999999999998654322211   111  1111   22334556777788899999988


Q ss_pred             ccc
Q 039049           82 SPV   84 (305)
Q Consensus        82 ~~~   84 (305)
                      +..
T Consensus       240 ~~p  242 (377)
T 2vhw_A          240 LVP  242 (377)
T ss_dssp             CCT
T ss_pred             CcC
Confidence            754

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.06  E-value=0.00084  Score=59.40  Aligned_cols=37  Identities=11%  Similarity=0.143  Sum_probs=32.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcc
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDL   38 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~   38 (305)
                      ++|||+||+|.||...++.+...|.+|+++++++++.
T Consensus       222 ~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~  258 (447)
T 4a0s_A          222 DIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKE  258 (447)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            5799999999999999999999999999998866543

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.05  E-value=0.00072  Score=57.61  Aligned_cols=70  Identities=24%  Similarity=0.220  Sum_probs=47.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcc---hHHHHhc--CCCE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG---SFDEAIQ--GVDG   76 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~~~~~~~--~~d~   76 (305)
                      .+|||+||+|.+|...++.+...|.+|+++ +++++......+        +...  .| .+.+   .+.++..  ++|+
T Consensus       152 ~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~l--------Ga~~--i~-~~~~~~~~~~~~~~~~g~D~  219 (343)
T 3gaz_A          152 QTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDL--------GATP--ID-ASREPEDYAAEHTAGQGFDL  219 (343)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHH--------TSEE--EE-TTSCHHHHHHHHHTTSCEEE
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHc--------CCCE--ec-cCCCHHHHHHHHhcCCCceE
Confidence            579999999999999999999999999998 665433222111        2233  33 2222   2333332  6899


Q ss_pred             EEEeccc
Q 039049           77 VFHTASP   83 (305)
Q Consensus        77 Vi~~a~~   83 (305)
                      ||++++.
T Consensus       220 vid~~g~  226 (343)
T 3gaz_A          220 VYDTLGG  226 (343)
T ss_dssp             EEESSCT
T ss_pred             EEECCCc
Confidence            9999874

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=97.05  E-value=0.0015  Score=54.32  Aligned_cols=38  Identities=16%  Similarity=0.222  Sum_probs=28.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccc
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSK   40 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~   40 (305)
                      +||.++| .|.+|..+++.|++.||+|++.+|++++...
T Consensus         6 ~kIgfIG-LG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~   43 (297)
T 4gbj_A            6 EKIAFLG-LGNLGTPIAEILLEAGYELVVWNRTASKAEP   43 (297)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEC-------CT
T ss_pred             CcEEEEe-cHHHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence            4799999 6999999999999999999999998875543

>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O

Probab=97.04  E-value=0.0031  Score=53.31  Aligned_cols=31  Identities=13%  Similarity=0.097  Sum_probs=25.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHc-CCeEEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDK-GHMVRTTVR   33 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~-g~~V~~~~r   33 (305)
                      +||.|.|+ |.||+.+++.|.+. +.+|.++.-
T Consensus         4 ikVgI~G~-GrIGr~l~R~l~~~p~vevvaI~d   35 (337)
T 3e5r_O            4 IKIGINGF-GRIGRLVARVALQSEDVELVAVND   35 (337)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTCSSEEEEEEEC
T ss_pred             eEEEEECc-CHHHHHHHHHHhCCCCeEEEEEEC
Confidence            38999999 99999999999876 457777753

>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*

Probab=97.04  E-value=0.00047  Score=60.22  Aligned_cols=80  Identities=10%  Similarity=0.103  Sum_probs=49.2

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceE-EE---EccCCCcchHHHHhcCCCE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLK-IM---KADLLMEGSFDEAIQGVDG   76 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~---~~D~~d~~~~~~~~~~~d~   76 (305)
                      ||+|.|+| +|++|..++..|++ |++|++++|++++......-. .+...+.++ .+   ...+.-..++.++++++|+
T Consensus        36 ~mkIaVIG-lG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~-~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~aDv  112 (432)
T 3pid_A           36 FMKITISG-TGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKI-SPIVDKEIQEYLAEKPLNFRATTDKHDAYRNADY  112 (432)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTC-CSSCCHHHHHHHHHSCCCEEEESCHHHHHTTCSE
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccC-CccccccHHHHHhhccCCeEEEcCHHHHHhCCCE
Confidence            57899999 59999999999987 999999999876443322100 000000000 00   0111112346677889999


Q ss_pred             EEEeccc
Q 039049           77 VFHTASP   83 (305)
Q Consensus        77 Vi~~a~~   83 (305)
                      ||-+...
T Consensus       113 ViiaVPt  119 (432)
T 3pid_A          113 VIIATPT  119 (432)
T ss_dssp             EEECCCC
T ss_pred             EEEeCCC
Confidence            9987544

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=97.02  E-value=0.00056  Score=57.03  Aligned_cols=38  Identities=18%  Similarity=0.288  Sum_probs=34.5

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCccc
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLS   39 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~   39 (305)
                      |+||-++| .|.+|+.+++.|++.||+|++.+|++++..
T Consensus         3 M~kIgfIG-lG~MG~~mA~~L~~~G~~v~v~dr~~~~~~   40 (300)
T 3obb_A            3 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVD   40 (300)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHH
T ss_pred             cCEEEEee-ehHHHHHHHHHHHhCCCeEEEEcCCHHHHH
Confidence            88999999 699999999999999999999999876443

>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A

Probab=97.01  E-value=0.00031  Score=62.48  Aligned_cols=37  Identities=11%  Similarity=0.296  Sum_probs=32.4

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHc--CCeEEEEEeCCCcc
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDK--GHMVRTTVRDPEDL   38 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~--g~~V~~~~r~~~~~   38 (305)
                      ||+|.|+| .|++|..++..|++.  |++|++++|++++.
T Consensus         5 ~mkI~VIG-~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~   43 (467)
T 2q3e_A            5 IKKICCIG-AGYVGGPTCSVIAHMCPEIRVTVVDVNESRI   43 (467)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHHCTTSEEEEECSCHHHH
T ss_pred             ccEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEECCHHHH
Confidence            46899999 599999999999999  89999999886543

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=97.00  E-value=0.0013  Score=54.75  Aligned_cols=64  Identities=13%  Similarity=0.047  Sum_probs=47.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      |+|.|+| .|.+|..+++.|++.|++|++.+|++++.......        ++..       ..++.++.+ +|+||-+.
T Consensus        16 ~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~--------g~~~-------~~~~~~~~~-aDvvi~~v   78 (296)
T 3qha_A           16 LKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEA--------GATL-------ADSVADVAA-ADLIHITV   78 (296)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHT--------TCEE-------CSSHHHHTT-SSEEEECC
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC--------CCEE-------cCCHHHHHh-CCEEEEEC
Confidence            4899999 59999999999999999999999988754433211        2211       234666777 89888775


Q ss_pred             c
Q 039049           82 S   82 (305)
Q Consensus        82 ~   82 (305)
                      .
T Consensus        79 p   79 (296)
T 3qha_A           79 L   79 (296)
T ss_dssp             S
T ss_pred             C
Confidence            4

>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*

Probab=96.99  E-value=0.0039  Score=52.83  Aligned_cols=32  Identities=16%  Similarity=0.182  Sum_probs=26.8

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHc-CCeEEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDK-GHMVRTTVR   33 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~-g~~V~~~~r   33 (305)
                      |.||.|.|+ |+||+.+++.|.+. +.+|.++.-
T Consensus        17 ~ikVgI~G~-G~iGr~llR~l~~~p~veivaind   49 (354)
T 3cps_A           17 QGTLGINGF-GRIGRLVLRACMERNDITVVAIND   49 (354)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCSSCEEEEEEC
T ss_pred             ceEEEEECC-CHHHHHHHHHHHcCCCeEEEEecC
Confidence            568999999 99999999999876 468887764

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=96.99  E-value=0.00078  Score=55.37  Aligned_cols=73  Identities=15%  Similarity=0.128  Sum_probs=47.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      ++++|+|+ |.+|++++..|++.|.+|++.+|+.++..........   ...+..  .|+   +++.+  .++|+|||++
T Consensus       120 ~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~---~~~~~~--~~~---~~~~~--~~~DivIn~t  188 (272)
T 1p77_A          120 QHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQP---YGNIQA--VSM---DSIPL--QTYDLVINAT  188 (272)
T ss_dssp             CEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGG---GSCEEE--EEG---GGCCC--SCCSEEEECC
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccc---cCCeEE--eeH---HHhcc--CCCCEEEECC
Confidence            68999997 8899999999999999999999987644332211110   012222  232   11110  3789999999


Q ss_pred             cccc
Q 039049           82 SPVL   85 (305)
Q Consensus        82 ~~~~   85 (305)
                      +...
T Consensus       189 ~~~~  192 (272)
T 1p77_A          189 SAGL  192 (272)
T ss_dssp             CC--
T ss_pred             CCCC
Confidence            8755

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=96.99  E-value=9.9e-05  Score=61.32  Aligned_cols=77  Identities=13%  Similarity=0.078  Sum_probs=48.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      ++++|+|+ |.+|+++++.|++.| +|++.+|+.++............ ... ..+.+|+.+   +.+.+.++|+|||++
T Consensus       129 k~vlV~Ga-GgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~-~~~-~~~~~d~~~---~~~~~~~~DilVn~a  201 (287)
T 1nvt_A          129 KNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKL-NKK-FGEEVKFSG---LDVDLDGVDIIINAT  201 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHH-TCC-HHHHEEEEC---TTCCCTTCCEEEECS
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhc-ccc-cceeEEEee---HHHhhCCCCEEEECC
Confidence            67999998 599999999999999 99999987654332211100000 000 001123322   123456789999999


Q ss_pred             cccc
Q 039049           82 SPVL   85 (305)
Q Consensus        82 ~~~~   85 (305)
                      +...
T Consensus       202 g~~~  205 (287)
T 1nvt_A          202 PIGM  205 (287)
T ss_dssp             CTTC
T ss_pred             CCCC
Confidence            9765

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.99  E-value=0.0022  Score=52.37  Aligned_cols=66  Identities=20%  Similarity=0.105  Sum_probs=48.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      ++++|+|+ |..|+.++..|++.|.+|++.+|+.++......+        +++..  ++.+   +    .++|+|||+.
T Consensus       119 k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~--------~~~~~--~~~~---l----~~~DiVInaT  180 (269)
T 3phh_A          119 QNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQRL--------GCDCF--MEPP---K----SAFDLIINAT  180 (269)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHH--------TCEEE--SSCC---S----SCCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC--------CCeEe--cHHH---h----ccCCEEEEcc
Confidence            68999996 9999999999999999999999998765443311        12222  2222   1    2789999997


Q ss_pred             cccc
Q 039049           82 SPVL   85 (305)
Q Consensus        82 ~~~~   85 (305)
                      ....
T Consensus       181 p~Gm  184 (269)
T 3phh_A          181 SASL  184 (269)
T ss_dssp             TTCC
T ss_pred             cCCC
Confidence            7654

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=96.99  E-value=0.0012  Score=57.96  Aligned_cols=67  Identities=18%  Similarity=0.127  Sum_probs=51.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~   79 (305)
                      ++|+|+|+ |.+|+.+++.+.+.|++|++++.++.....  ..        .-..+..|..|.+.+.++.+++|+|+.
T Consensus        36 ~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~--~~--------ad~~~~~~~~d~~~l~~~a~~~D~V~~  102 (419)
T 4e4t_A           36 AWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPAG--AV--------ADRHLRAAYDDEAALAELAGLCEAVST  102 (419)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHHH--HH--------SSEEECCCTTCHHHHHHHHHHCSEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCchh--hh--------CCEEEECCcCCHHHHHHHHhcCCEEEE
Confidence            58999996 999999999999999999999765442211  11        113556888999999998889999883

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=96.97  E-value=0.0025  Score=54.49  Aligned_cols=94  Identities=13%  Similarity=0.103  Sum_probs=53.4

Q ss_pred             CcEEEeCCcchHHHHHHH-HHHHcCC---eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEE
Q 039049            2 PEYCVTGGTGFIAAHLVK-ALLDKGH---MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGV   77 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~-~l~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~V   77 (305)
                      ++|.|+||||++|+.|++ .|.++.+   ++..++.+.... +...+   .+  ....+.  |..+.    ..++++|+|
T Consensus         1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~-~~~~~---~~--~~~~~~--~~~~~----~~~~~~Dvv   68 (370)
T 3pzr_A            1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGV-PAPNF---GK--DAGMLH--DAFDI----ESLKQLDAV   68 (370)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTS-BCCCS---SS--CCCBCE--ETTCH----HHHTTCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccccCc-CHHHh---CC--CceEEE--ecCCh----hHhccCCEE
Confidence            579999999999999999 6766653   555554322111 11101   11  011111  22222    225789999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCcc-EEEEeccc
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVK-RVVLTSSC  126 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~SS~  126 (305)
                      |-|.+...                  +......+.+. |++ ++|=.||.
T Consensus        69 f~a~~~~~------------------s~~~~~~~~~~-G~k~~VID~ss~   99 (370)
T 3pzr_A           69 ITCQGGSY------------------TEKVYPALRQA-GWKGYWIDAAST   99 (370)
T ss_dssp             EECSCHHH------------------HHHHHHHHHHT-TCCCEEEECSST
T ss_pred             EECCChHH------------------HHHHHHHHHHC-CCCEEEEeCCch
Confidence            98876532                  33445555566 774 66666663

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.97  E-value=0.00023  Score=58.92  Aligned_cols=36  Identities=17%  Similarity=0.218  Sum_probs=32.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcc
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDL   38 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~   38 (305)
                      ++|.|+|+ |.+|+.+++.|++.|++|++.+|+++..
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~   40 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDAL   40 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHH
Confidence            68999986 9999999999999999999999887643

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.96  E-value=0.00088  Score=57.30  Aligned_cols=74  Identities=18%  Similarity=0.128  Sum_probs=52.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccC------------------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADL------------------LM   63 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~------------------~d   63 (305)
                      .+|+|+|+ |-+|...++.+...|.+|++++|++.+......+        +..++..|.                  .+
T Consensus       185 ~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~l--------Ga~~~~l~~~~~~~~gya~~~~~~~~~~~  255 (381)
T 3p2y_A          185 ASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSV--------GAQWLDLGIDAAGEGGYARELSEAERAQQ  255 (381)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHT--------TCEECCCC-------------CHHHHHHH
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc--------CCeEEeccccccccccchhhhhHHHHhhh
Confidence            57999997 9999999999999999999999987654433222        223322110                  11


Q ss_pred             cchHHHHhcCCCEEEEecccc
Q 039049           64 EGSFDEAIQGVDGVFHTASPV   84 (305)
Q Consensus        64 ~~~~~~~~~~~d~Vi~~a~~~   84 (305)
                      .+.+.+.+.++|+||.++...
T Consensus       256 ~~~l~e~l~~aDIVI~tv~iP  276 (381)
T 3p2y_A          256 QQALEDAITKFDIVITTALVP  276 (381)
T ss_dssp             HHHHHHHHTTCSEEEECCCCT
T ss_pred             HHHHHHHHhcCCEEEECCCCC
Confidence            345777888999999887543

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=96.96  E-value=0.0031  Score=51.85  Aligned_cols=74  Identities=12%  Similarity=0.150  Sum_probs=44.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHc-CCeEEEEE-eCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDK-GHMVRTTV-RDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~-g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~   79 (305)
                      +||.|.|++|.+|+.+++.+.+. +.++.++. |+++.... .......    ++.  ..++.-.+++.+++.++|+||.
T Consensus        22 irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G-~d~gel~----G~~--~~gv~v~~dl~~ll~~aDVvID   94 (288)
T 3ijp_A           22 MRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVD-KDASILI----GSD--FLGVRITDDPESAFSNTEGILD   94 (288)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTT-SBGGGGT----TCS--CCSCBCBSCHHHHTTSCSEEEE
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccc-cchHHhh----ccC--cCCceeeCCHHHHhcCCCEEEE
Confidence            58999999999999999998865 56776664 43321110 0000010    000  1122223457778889999998


Q ss_pred             ecc
Q 039049           80 TAS   82 (305)
Q Consensus        80 ~a~   82 (305)
                      +..
T Consensus        95 FT~   97 (288)
T 3ijp_A           95 FSQ   97 (288)
T ss_dssp             CSC
T ss_pred             cCC
Confidence            853

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.95  E-value=0.0016  Score=54.38  Aligned_cols=68  Identities=18%  Similarity=0.288  Sum_probs=50.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      ++|+|+|+ |-+|+.+++.|...|.+|++.+|++++....   ...     ++..+     +.+.+.++++++|+||.+.
T Consensus       158 ~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~---~~~-----g~~~~-----~~~~l~~~l~~aDvVi~~~  223 (300)
T 2rir_A          158 SQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARI---TEM-----GLVPF-----HTDELKEHVKDIDICINTI  223 (300)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHH---HHT-----TCEEE-----EGGGHHHHSTTCSEEEECC
T ss_pred             CEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHH---HHC-----CCeEE-----chhhHHHHhhCCCEEEECC
Confidence            68999996 9999999999999999999999876432211   110     22222     1245778888999999987


Q ss_pred             cc
Q 039049           82 SP   83 (305)
Q Consensus        82 ~~   83 (305)
                      ..
T Consensus       224 p~  225 (300)
T 2rir_A          224 PS  225 (300)
T ss_dssp             SS
T ss_pred             Ch
Confidence            75

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.93  E-value=0.0017  Score=54.00  Aligned_cols=68  Identities=15%  Similarity=0.253  Sum_probs=49.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      ++|+|+|+ |-+|+.+++.|...|.+|++.+|++.+......+        ++..+     +.+.+.+++.++|+|+.+.
T Consensus       156 ~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~--------g~~~~-----~~~~l~~~l~~aDvVi~~~  221 (293)
T 3d4o_A          156 ANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARIAEM--------GMEPF-----HISKAAQELRDVDVCINTI  221 (293)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT--------TSEEE-----EGGGHHHHTTTCSEEEECC
T ss_pred             CEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHC--------CCeec-----ChhhHHHHhcCCCEEEECC
Confidence            68999995 9999999999999999999999876432211110        22322     1345778888999999987


Q ss_pred             cc
Q 039049           82 SP   83 (305)
Q Consensus        82 ~~   83 (305)
                      ..
T Consensus       222 p~  223 (293)
T 3d4o_A          222 PA  223 (293)
T ss_dssp             SS
T ss_pred             Ch
Confidence            53

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=96.93  E-value=0.00091  Score=56.00  Aligned_cols=66  Identities=17%  Similarity=0.182  Sum_probs=46.3

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ||+|.|+| .|.+|..+++.|++.|++|++.+|++++.......        ++..       ..++.++++++|+||-+
T Consensus         9 ~~~IgiIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~--------g~~~-------~~~~~e~~~~aDvVi~~   72 (306)
T 3l6d_A            9 EFDVSVIG-LGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAA--------GAHL-------CESVKAALSASPATIFV   72 (306)
T ss_dssp             SCSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH--------TCEE-------CSSHHHHHHHSSEEEEC
T ss_pred             CCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC--------CCee-------cCCHHHHHhcCCEEEEE
Confidence            36899998 59999999999999999999999887543322111        1111       23355566677888876


Q ss_pred             cc
Q 039049           81 AS   82 (305)
Q Consensus        81 a~   82 (305)
                      ..
T Consensus        73 vp   74 (306)
T 3l6d_A           73 LL   74 (306)
T ss_dssp             CS
T ss_pred             eC
Confidence            54

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=96.93  E-value=0.0011  Score=58.81  Aligned_cols=35  Identities=17%  Similarity=0.207  Sum_probs=32.7

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHc-CC-eEEEEEeCCC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDK-GH-MVRTTVRDPE   36 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~-g~-~V~~~~r~~~   36 (305)
                      ||+|.|+|+ |++|..++..|++. |+ +|++++|+++
T Consensus        18 ~mkIaVIGl-G~mG~~lA~~la~~~G~~~V~~~D~~~~   54 (478)
T 3g79_A           18 IKKIGVLGM-GYVGIPAAVLFADAPCFEKVLGFQRNSK   54 (478)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence            578999995 99999999999999 99 9999999987

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.92  E-value=0.0012  Score=56.56  Aligned_cols=72  Identities=14%  Similarity=-0.015  Sum_probs=49.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCc-chHHHHhcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME-GSFDEAIQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~~~d~Vi~~   80 (305)
                      .+|||+|+ |-+|...++.+...|.+|+++++++++......+        +...+ .|..+. +..+++..++|+||++
T Consensus       181 ~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~l--------Ga~~v-~~~~~~~~~~~~~~~~~D~vid~  250 (360)
T 1piw_A          181 KKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKM--------GADHY-IATLEEGDWGEKYFDTFDLIVVC  250 (360)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH--------TCSEE-EEGGGTSCHHHHSCSCEEEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHc--------CCCEE-EcCcCchHHHHHhhcCCCEEEEC
Confidence            57999999 9999999999888999999999987754432222        11211 233333 3233333589999999


Q ss_pred             ccc
Q 039049           81 ASP   83 (305)
Q Consensus        81 a~~   83 (305)
                      ++.
T Consensus       251 ~g~  253 (360)
T 1piw_A          251 ASS  253 (360)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            886

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=96.91  E-value=0.0026  Score=54.84  Aligned_cols=72  Identities=8%  Similarity=0.093  Sum_probs=47.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHh--cCCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAI--QGVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~--~~~d~Vi~   79 (305)
                      .+|+|+||+|-+|...++.+...|.+|+++.+ +++..   ....+     +...+ .|..+.+..+++.  .++|+||+
T Consensus       185 ~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~---~~~~l-----Ga~~v-~~~~~~~~~~~~~~~~g~D~vid  254 (375)
T 2vn8_A          185 KRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASE---LVRKL-----GADDV-IDYKSGSVEEQLKSLKPFDFILD  254 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHH---HHHHT-----TCSEE-EETTSSCHHHHHHTSCCBSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHH---HHHHc-----CCCEE-EECCchHHHHHHhhcCCCCEEEE
Confidence            57999999999999999999999999998873 33222   11111     12211 2444433333333  37999999


Q ss_pred             eccc
Q 039049           80 TASP   83 (305)
Q Consensus        80 ~a~~   83 (305)
                      +++.
T Consensus       255 ~~g~  258 (375)
T 2vn8_A          255 NVGG  258 (375)
T ss_dssp             SSCT
T ss_pred             CCCC
Confidence            9885

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=96.91  E-value=0.00083  Score=54.73  Aligned_cols=67  Identities=21%  Similarity=0.200  Sum_probs=47.3

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ||+|.|+| .|.+|+.+++.|.+.|++|.+.+|++++.....   ...    ++.       ...++.++++++|+||-+
T Consensus         3 ~m~i~iiG-~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~---~~~----g~~-------~~~~~~~~~~~~D~Vi~~   67 (259)
T 2ahr_A            3 AMKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIA---EQL----ALP-------YAMSHQDLIDQVDLVILG   67 (259)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHH---HHH----TCC-------BCSSHHHHHHTCSEEEEC
T ss_pred             ccEEEEEC-CCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHH---HHc----CCE-------eeCCHHHHHhcCCEEEEE
Confidence            68999999 699999999999999999999988765332221   110    111       122355666789999988


Q ss_pred             cc
Q 039049           81 AS   82 (305)
Q Consensus        81 a~   82 (305)
                      ..
T Consensus        68 v~   69 (259)
T 2ahr_A           68 IK   69 (259)
T ss_dssp             SC
T ss_pred             eC
Confidence            65

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=96.90  E-value=0.0021  Score=54.06  Aligned_cols=34  Identities=15%  Similarity=0.053  Sum_probs=31.4

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcC-CeEEEEEeCC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKG-HMVRTTVRDP   35 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~r~~   35 (305)
                      ||+|.|+| .|.+|..+++.|++.| ++|++.+|++
T Consensus        24 ~m~IgvIG-~G~mG~~lA~~L~~~G~~~V~~~dr~~   58 (317)
T 4ezb_A           24 MTTIAFIG-FGEAAQSIAGGLGGRNAARLAAYDLRF   58 (317)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred             CCeEEEEC-ccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence            36899999 5999999999999999 9999999986

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=96.89  E-value=0.0028  Score=54.20  Aligned_cols=36  Identities=19%  Similarity=0.242  Sum_probs=32.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcc
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDL   38 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~   38 (305)
                      |+|.|+| .|.+|..+++.|++.|++|++.+|++++.
T Consensus        23 mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~   58 (358)
T 4e21_A           23 MQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAV   58 (358)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             CEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHH
Confidence            7899999 69999999999999999999999986543

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.87  E-value=0.0066  Score=50.08  Aligned_cols=33  Identities=15%  Similarity=0.038  Sum_probs=28.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDP   35 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~   35 (305)
                      .+|+|+|+ |.+|+++++.|+..|. ++++++.+.
T Consensus        37 ~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~   70 (292)
T 3h8v_A           37 FAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDK   70 (292)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             CeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCc
Confidence            57999996 9999999999999995 788887654

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=96.87  E-value=0.0027  Score=54.52  Aligned_cols=71  Identities=21%  Similarity=0.156  Sum_probs=47.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCc----chHHHHhc--CCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME----GSFDEAIQ--GVD   75 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~----~~~~~~~~--~~d   75 (305)
                      .+|||+| +|.+|...++.+...|.+|+++++++++......+        +...+ .| .+.    +.+.++..  ++|
T Consensus       191 ~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l--------Ga~~v-i~-~~~~~~~~~v~~~~~g~g~D  259 (363)
T 3uog_A          191 DRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAFAL--------GADHG-IN-RLEEDWVERVYALTGDRGAD  259 (363)
T ss_dssp             CEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH--------TCSEE-EE-TTTSCHHHHHHHHHTTCCEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHc--------CCCEE-Ec-CCcccHHHHHHHHhCCCCce
Confidence            5799999 79999999999999999999999876543322221        12222 13 222    22333333  689


Q ss_pred             EEEEeccc
Q 039049           76 GVFHTASP   83 (305)
Q Consensus        76 ~Vi~~a~~   83 (305)
                      +||++++.
T Consensus       260 ~vid~~g~  267 (363)
T 3uog_A          260 HILEIAGG  267 (363)
T ss_dssp             EEEEETTS
T ss_pred             EEEECCCh
Confidence            99999983

>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}

Probab=96.86  E-value=0.0035  Score=53.82  Aligned_cols=31  Identities=16%  Similarity=0.182  Sum_probs=25.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC-CeEEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG-HMVRTTV   32 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~   32 (305)
                      +||.|.||||++|..|++.|.+.. .++..+.
T Consensus        20 ~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~   51 (381)
T 3hsk_A           20 KKAGVLGATGSVGQRFILLLSKHPEFEIHALG   51 (381)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             cEEEEECCCChHHHHHHHHHHcCCCceEEEee
Confidence            479999999999999999887765 3676553

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.86  E-value=0.00071  Score=56.57  Aligned_cols=36  Identities=14%  Similarity=0.159  Sum_probs=32.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcc
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDL   38 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~   38 (305)
                      |+|.|+| .|.+|..+++.|++.|++|++.+|++++.
T Consensus         8 ~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~   43 (303)
T 3g0o_A            8 FHVGIVG-LGSMGMGAARSCLRAGLSTWGADLNPQAC   43 (303)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHHH
Confidence            6899998 59999999999999999999999987543

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.85  E-value=0.0036  Score=52.52  Aligned_cols=67  Identities=21%  Similarity=0.223  Sum_probs=46.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC--eEEEEEeCCCcccchhhhhhccCccCce-EEEEccCCCcchHHH-HhcCCCEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH--MVRTTVRDPEDLSKVGFLWELNGAEERL-KIMKADLLMEGSFDE-AIQGVDGV   77 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~d~~~~~~-~~~~~d~V   77 (305)
                      |+|.|+| .|.+|..+++.|.+.|+  +|++.+|+++........        ++ ....      .++.+ +++++|+|
T Consensus        34 ~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~--------G~~~~~~------~~~~~~~~~~aDvV   98 (314)
T 3ggo_A           34 QNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL--------GIIDEGT------TSIAKVEDFSPDFV   98 (314)
T ss_dssp             SEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT--------TSCSEEE------SCTTGGGGGCCSEE
T ss_pred             CEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHC--------CCcchhc------CCHHHHhhccCCEE
Confidence            6899999 69999999999999999  999998886543322111        11 0111      12334 56788999


Q ss_pred             EEeccc
Q 039049           78 FHTASP   83 (305)
Q Consensus        78 i~~a~~   83 (305)
                      |.+...
T Consensus        99 ilavp~  104 (314)
T 3ggo_A           99 MLSSPV  104 (314)
T ss_dssp             EECSCG
T ss_pred             EEeCCH
Confidence            987644

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=96.85  E-value=0.0018  Score=56.93  Aligned_cols=81  Identities=19%  Similarity=0.221  Sum_probs=51.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEE------EEccCCCcchHHHHhcCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKI------MKADLLMEGSFDEAIQGVD   75 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~------~~~D~~d~~~~~~~~~~~d   75 (305)
                      -+|.|+| .|++|..++..|++.|++|++.+|++++......- ..+...+++.-      ..+.+.-..++.++++++|
T Consensus         9 ~~~~vIG-lG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g-~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aD   86 (446)
T 4a7p_A            9 VRIAMIG-TGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQN-VMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDAD   86 (446)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTT-CCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCS
T ss_pred             eEEEEEc-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcC-CCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCC
Confidence            3689999 59999999999999999999999998765443221 01111111110      0011111234667788899


Q ss_pred             EEEEecccc
Q 039049           76 GVFHTASPV   84 (305)
Q Consensus        76 ~Vi~~a~~~   84 (305)
                      +||-+.+..
T Consensus        87 vvii~Vptp   95 (446)
T 4a7p_A           87 AVFIAVGTP   95 (446)
T ss_dssp             EEEECCCCC
T ss_pred             EEEEEcCCC
Confidence            999887654

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.85  E-value=0.0021  Score=55.40  Aligned_cols=75  Identities=21%  Similarity=0.170  Sum_probs=52.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEcc----------------CCC--
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKAD----------------LLM--   63 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D----------------~~d--   63 (305)
                      .+|+|+|+ |-+|...++.+...|.+|++.++++........+        +..++..+                +.+  
T Consensus       191 ~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~--------G~~~~~~~~~~~~d~~~~~~ya~e~s~~~  261 (405)
T 4dio_A          191 AKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVASL--------GAKFIAVEDEEFKAAETAGGYAKEMSGEY  261 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHT--------TCEECCCCC-----------------CHH
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHc--------CCceeecccccccccccccchhhhcchhh
Confidence            47999997 9999999999999999999999988754332221        12222211                111  


Q ss_pred             ----cchHHHHhcCCCEEEEeccccc
Q 039049           64 ----EGSFDEAIQGVDGVFHTASPVL   85 (305)
Q Consensus        64 ----~~~~~~~~~~~d~Vi~~a~~~~   85 (305)
                          .+.+.++++++|+||+++....
T Consensus       262 ~~~~~~~l~e~l~~aDVVI~tvlipg  287 (405)
T 4dio_A          262 QVKQAALVAEHIAKQDIVITTALIPG  287 (405)
T ss_dssp             HHHHHHHHHHHHHTCSEEEECCCCSS
T ss_pred             hhhhHhHHHHHhcCCCEEEECCcCCC
Confidence                2367778889999999876543

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=96.84  E-value=0.0018  Score=50.97  Aligned_cols=34  Identities=18%  Similarity=0.107  Sum_probs=30.1

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDP   35 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~   35 (305)
                      +|+|.|+| .|.+|+.++..|++.|++|++.+|++
T Consensus        19 ~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~   52 (209)
T 2raf_A           19 GMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKD   52 (209)
T ss_dssp             -CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence            47899999 69999999999999999999997764

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=96.84  E-value=0.0036  Score=54.23  Aligned_cols=66  Identities=12%  Similarity=0.010  Sum_probs=50.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      ++|+|+|+ |.+|+.+++.+.+.|++|++++.++......  .        --..+..|..|.+.+.++++.+|+|.
T Consensus        15 k~IlIlG~-G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~--~--------ad~~~~~~~~d~~~l~~~~~~~dvI~   80 (389)
T 3q2o_A           15 KTIGIIGG-GQLGRMMALAAKEMGYKIAVLDPTKNSPCAQ--V--------ADIEIVASYDDLKAIQHLAEISDVVT   80 (389)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTTT--T--------CSEEEECCTTCHHHHHHHHHTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchHH--h--------CCceEecCcCCHHHHHHHHHhCCEee
Confidence            58999996 8999999999999999999998765422110  0        11345578889888999998999874

>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}

Probab=96.84  E-value=0.003  Score=54.16  Aligned_cols=94  Identities=11%  Similarity=0.034  Sum_probs=53.7

Q ss_pred             CcEEEeCCcchHHHHHHH-HHHHcCC---eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEE
Q 039049            2 PEYCVTGGTGFIAAHLVK-ALLDKGH---MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGV   77 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~-~l~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~V   77 (305)
                      ++|.|+||||++|+.|++ .|.+..+   ++..++.+.. -.....+   .+  ....+.  ++.+.+    .+.++|+|
T Consensus         5 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~a-G~~~~~~---~~--~~~~v~--~~~~~~----~~~~vDvv   72 (377)
T 3uw3_A            5 MNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSNA-GGKAPSF---AK--NETTLK--DATSID----DLKKCDVI   72 (377)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSCT-TSBCCTT---CC--SCCBCE--ETTCHH----HHHTCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEechhc-CCCHHHc---CC--CceEEE--eCCChh----HhcCCCEE
Confidence            589999999999999999 6666653   5555543311 1111111   11  011111  222322    24689999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCcc-EEEEeccc
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVK-RVVLTSSC  126 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~SS~  126 (305)
                      |-|.+...                  +......+.+. |++ ++|=.|+.
T Consensus        73 f~a~~~~~------------------s~~~~~~~~~~-G~k~~VID~ss~  103 (377)
T 3uw3_A           73 ITCQGGDY------------------TNDVFPKLRAA-GWNGYWIDAASS  103 (377)
T ss_dssp             EECSCHHH------------------HHHHHHHHHHT-TCCSEEEECSST
T ss_pred             EECCChHH------------------HHHHHHHHHHC-CCCEEEEeCCcc
Confidence            98876532                  33445555666 774 67777763

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=96.84  E-value=0.0013  Score=56.23  Aligned_cols=81  Identities=17%  Similarity=0.133  Sum_probs=49.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccC-CCcchHHHHhcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADL-LMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~d~~~~~~~~~~~d~Vi~~   80 (305)
                      |+|.|+|+ |.+|..++..|++.|++|++++|+++............-....... ...+ ...+++.++++++|+||-+
T Consensus         5 mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~vi~~   82 (359)
T 1bg6_A            5 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAG-TAHPDLLTSDIGLAVKDADVILIV   82 (359)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCE-EECCSEEESCHHHHHTTCSEEEEC
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEecccccc-ccccceecCCHHHHHhcCCEEEEe
Confidence            68999996 9999999999999999999998876543322111000000000000 0111 0123456667889999988


Q ss_pred             cccc
Q 039049           81 ASPV   84 (305)
Q Consensus        81 a~~~   84 (305)
                      ....
T Consensus        83 v~~~   86 (359)
T 1bg6_A           83 VPAI   86 (359)
T ss_dssp             SCGG
T ss_pred             CCch
Confidence            7653

>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}

Probab=96.83  E-value=0.0011  Score=59.14  Aligned_cols=37  Identities=11%  Similarity=0.243  Sum_probs=32.3

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHc--CCeEEEEEeCCCcc
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDK--GHMVRTTVRDPEDL   38 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~--g~~V~~~~r~~~~~   38 (305)
                      ||+|.|+| .|++|..++..|++.  |++|++++|++++.
T Consensus         9 ~mkI~VIG-~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v   47 (481)
T 2o3j_A            9 VSKVVCVG-AGYVGGPTCAMIAHKCPHITVTVVDMNTAKI   47 (481)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHHCTTSEEEEECSCHHHH
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEECCHHHH
Confidence            47899999 599999999999998  79999999876543

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.83  E-value=0.001  Score=55.47  Aligned_cols=65  Identities=17%  Similarity=0.221  Sum_probs=45.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      |+|.|+| .|.+|+.+++.|++.|++|++.+|+++.......   .     ++..       ..++.++++++|+||.+.
T Consensus         6 m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~---~-----g~~~-------~~~~~~~~~~~D~vi~~v   69 (299)
T 1vpd_A            6 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA---A-----GAET-------ASTAKAIAEQCDVIITML   69 (299)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH---T-----TCEE-------CSSHHHHHHHCSEEEECC
T ss_pred             ceEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH---C-----CCee-------cCCHHHHHhCCCEEEEEC
Confidence            5899999 5999999999999999999999887653322211   0     1211       123455566789888876


Q ss_pred             c
Q 039049           82 S   82 (305)
Q Consensus        82 ~   82 (305)
                      .
T Consensus        70 ~   70 (299)
T 1vpd_A           70 P   70 (299)
T ss_dssp             S
T ss_pred             C
Confidence            5

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=96.83  E-value=0.0015  Score=58.21  Aligned_cols=36  Identities=22%  Similarity=0.230  Sum_probs=32.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcc
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDL   38 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~   38 (305)
                      |+|.|+| .|++|..++..|++.|++|++++|++++.
T Consensus         9 ~~I~VIG-~G~vG~~lA~~la~~G~~V~~~d~~~~~v   44 (478)
T 2y0c_A            9 MNLTIIG-SGSVGLVTGACLADIGHDVFCLDVDQAKI   44 (478)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             ceEEEEC-cCHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence            7899999 59999999999999999999999986543

>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A

Probab=96.83  E-value=0.0017  Score=54.98  Aligned_cols=93  Identities=17%  Similarity=0.201  Sum_probs=54.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC---eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH---MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      ++|.|.||||++|..|++.|.+..+   ++..+....+.-.... +   .  .....+...|  . +    .++++|+||
T Consensus         2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~-~---~--~~~~~~~~~~--~-~----~~~~~Dvvf   68 (344)
T 3tz6_A            2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLA-F---R--GQEIEVEDAE--T-A----DPSGLDIAL   68 (344)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEE-E---T--TEEEEEEETT--T-S----CCTTCSEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCcee-e---c--CCceEEEeCC--H-H----HhccCCEEE
Confidence            5899999999999999999888754   4555543222111111 1   0  0112222222  1 1    246899999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccce
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCS  127 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  127 (305)
                      -|.+...                  +......+.+. |+ ++|=.|+..
T Consensus        69 ~a~~~~~------------------s~~~a~~~~~~-G~-~vID~Sa~~   97 (344)
T 3tz6_A           69 FSAGSAM------------------SKVQAPRFAAA-GV-TVIDNSSAW   97 (344)
T ss_dssp             ECSCHHH------------------HHHHHHHHHHT-TC-EEEECSSTT
T ss_pred             ECCChHH------------------HHHHHHHHHhC-CC-EEEECCCcc
Confidence            8876532                  33445555566 75 688888753

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=96.82  E-value=0.0014  Score=53.67  Aligned_cols=67  Identities=19%  Similarity=0.202  Sum_probs=45.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCe-EEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHM-VRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      |+|.|+|+ |.+|+.+++.|++.|++ |.+.+|+++......   ...    ++.. .      .++.++++++|+||-+
T Consensus        11 m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~---~~~----g~~~-~------~~~~~~~~~~Dvvi~a   75 (266)
T 3d1l_A           11 TPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELA---QKV----EAEY-T------TDLAEVNPYAKLYIVS   75 (266)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHH---HHT----TCEE-E------SCGGGSCSCCSEEEEC
T ss_pred             CeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHH---HHc----CCce-e------CCHHHHhcCCCEEEEe
Confidence            68999996 99999999999999998 888888765332211   110    2221 1      1233445688999977


Q ss_pred             ccc
Q 039049           81 ASP   83 (305)
Q Consensus        81 a~~   83 (305)
                      ...
T Consensus        76 v~~   78 (266)
T 3d1l_A           76 LKD   78 (266)
T ss_dssp             CCH
T ss_pred             cCH
Confidence            543

>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}

Probab=96.82  E-value=0.0017  Score=53.99  Aligned_cols=65  Identities=14%  Similarity=0.106  Sum_probs=44.4

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ||+|.|+| .|.+|+.+++.|++.|++|++.+ +++.......   .     ++       ....++.++++++|+||-+
T Consensus         3 ~m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~---~-----g~-------~~~~~~~~~~~~~D~vi~~   65 (295)
T 1yb4_A            3 AMKLGFIG-LGIMGSPMAINLARAGHQLHVTT-IGPVADELLS---L-----GA-------VNVETARQVTEFADIIFIM   65 (295)
T ss_dssp             -CEEEECC-CSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHT---T-----TC-------BCCSSHHHHHHTCSEEEEC
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHH---c-----CC-------cccCCHHHHHhcCCEEEEE
Confidence            67999999 59999999999999999999887 6543322211   0     11       1123355666678888877


Q ss_pred             cc
Q 039049           81 AS   82 (305)
Q Consensus        81 a~   82 (305)
                      ..
T Consensus        66 vp   67 (295)
T 1yb4_A           66 VP   67 (295)
T ss_dssp             CS
T ss_pred             CC
Confidence            63

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=96.82  E-value=0.003  Score=55.06  Aligned_cols=68  Identities=15%  Similarity=0.085  Sum_probs=52.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~   79 (305)
                      ++|+|+|| |.+|+.+++.+.+.|++|++++ ++.....  .+      ......+.+|..|.+.+.++.+.+|+|+-
T Consensus        25 ~~I~ilGg-G~lg~~l~~aa~~lG~~v~~~d-~~~~p~~--~~------ad~~~~~~~~~~d~~~l~~~a~~~d~i~~   92 (403)
T 3k5i_A           25 RKVGVLGG-GQLGRMLVESANRLNIQVNVLD-ADNSPAK--QI------SAHDGHVTGSFKEREAVRQLAKTCDVVTA   92 (403)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCEEEEEE-STTCTTG--GG------CCSSCCEESCTTCHHHHHHHHTTCSEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEE-CCCCcHH--Hh------ccccceeecCCCCHHHHHHHHHhCCEEEE
Confidence            58999997 8999999999999999999998 5432211  11      11124567899999999999999998764

>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*

Probab=96.80  E-value=0.00072  Score=56.00  Aligned_cols=36  Identities=17%  Similarity=0.058  Sum_probs=31.4

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcc
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDL   38 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~   38 (305)
                      ||+|.|+|+ |.+|+.+++.|++ |++|++.+|++++.
T Consensus         1 M~~i~iiG~-G~~G~~~a~~l~~-g~~V~~~~~~~~~~   36 (289)
T 2cvz_A            1 MEKVAFIGL-GAMGYPMAGHLAR-RFPTLVWNRTFEKA   36 (289)
T ss_dssp             -CCEEEECC-STTHHHHHHHHHT-TSCEEEECSSTHHH
T ss_pred             CCeEEEEcc-cHHHHHHHHHHhC-CCeEEEEeCCHHHH
Confidence            789999995 9999999999999 99999998887543

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=96.79  E-value=0.0015  Score=52.77  Aligned_cols=36  Identities=36%  Similarity=0.492  Sum_probs=32.5

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCc
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPED   37 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~   37 (305)
                      +|+|.|+| .|.+|+++++.|++.|++|++.+|++++
T Consensus        19 ~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~~~   54 (245)
T 3dtt_A           19 GMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDPKA   54 (245)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             CCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence            47899998 6999999999999999999999998654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	305
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	1e-36
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	8e-35
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-32
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	5e-29
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	2e-24
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	2e-21
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	1e-20
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-20
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	3e-19
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	5e-19
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	1e-18
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	1e-17
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	4e-17
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	1e-16
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	1e-16
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	1e-14
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	2e-14
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	5e-14
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	4e-13
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	2e-11
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	2e-09
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	3e-08
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	4e-08
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	7e-08
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	2e-07
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	9e-07
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	5e-06
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	2e-05
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	3e-05
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	6e-05
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	2e-04
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	0.001

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  131 bits (330), Expect = 1e-36
 Identities = 64/298 (21%), Positives = 113/298 (37%), Gaps = 22/298 (7%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           +TGG GF+ +HL   L+  GH V  TV D     +   +    G  E  +++  D++   
Sbjct: 6   ITGGAGFVGSHLTDKLMMDGHEV--TVVDNFFTGRKRNVEHWIG-HENFELINHDVV--- 59

Query: 66  SFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSS 125
             +     VD ++H ASP   P         +     GTLN+L   K+     R++L S+
Sbjct: 60  --EPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG--ARLLLAST 115

Query: 126 CSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVN 185
                  +   +V P +E +W   +        Y   K +AE   +   K  G+++ V  
Sbjct: 116 SEV----YGDPEVHPQSEDYWGHVNPIGPRA-CYDEGKRVAETMCYAYMKQEGVEVRVAR 170

Query: 186 PSFVVGPLLAPQPTSTL-LLILAMVKG----LRGEYPNTTVGFVHIDDVVGAHILAMEET 240
                GP +       +   IL  ++G    + G   + T  F ++ D+V   +  M   
Sbjct: 171 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGS-GSQTRAFQYVSDLVNGLVALMNSN 229

Query: 241 RASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLF-ELGF 297
            +S   + +          +++K    S       S+ + D      D  K    LG+
Sbjct: 230 VSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGW 287

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score =  127 bits (318), Expect = 8e-35
 Identities = 83/318 (26%), Positives = 135/318 (42%), Gaps = 22/318 (6%)

Query: 5   CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME 64
            VTG  GF+A+H+V+ LL+ G+ VR T R    L+ +   W+          +  D+L +
Sbjct: 15  LVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQ 74

Query: 65  GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
           G++DE I+G  GV H AS V      +     + P I GTLN L +     SVKR VLTS
Sbjct: 75  GAYDEVIKGAAGVAHIASVVSFSNKYDEV---VTPAIGGTLNALRAAAATPSVKRFVLTS 131

Query: 125 SCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLW----------YAYAKTIAEKEAWRIA 174
           S  S        +   L+E  W+     K   L           YA +KT AE  AW+  
Sbjct: 132 STVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFM 191

Query: 175 KDCGI--DMVVVNPSFVVGPLLAPQ--PTSTLLLILAMVKGLRGEYPNTTV--GFVHIDD 228
            +      +  V P++ +G +  P+    ST   ++++  G             +V   D
Sbjct: 192 DENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSAVD 251

Query: 229 VVGAHILAMEETRASG-RLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPH-- 285
           +   H+  +   +    R+  ++    W+ ++   +  YPS  + +    Q  D S    
Sbjct: 252 IGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPDQGQDLSKFDT 311

Query: 286 SMDTSKLFELGFVGFKSV 303
           +     L  LG  G++S+
Sbjct: 312 APSLEILKSLGRPGWRSI 329

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score =  120 bits (302), Expect = 1e-32
 Identities = 65/302 (21%), Positives = 116/302 (38%), Gaps = 22/302 (7%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTT--VRDPEDLSKVGFLWELNG--AEERLKIMKADL 61
           VTGG GFI +H V+ LL   +       V   + L+  G    L    A+ RL+ +  D+
Sbjct: 5   VTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDI 64

Query: 62  LMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVV 121
              G     ++GVD + H A+   V       +   +  ++GT  +L     A   + V 
Sbjct: 65  RDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVH 124

Query: 122 LTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDM 181
              S + +    D+       ES   +P+        YA +K  ++  A    +  G+D+
Sbjct: 125 --VSTNQVYGSIDSG---SWTESSPLEPNSP------YAASKAGSDLVARAYHRTYGLDV 173

Query: 182 VVVNPSFVVGPLLAPQPTSTLLLILAMVKG---LRGEYPNTTVGFVHIDDVVGAHILAME 238
            +       GP   P+    L +   +  G   L G+       +VH DD      L + 
Sbjct: 174 RITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGD-GANVREWVHTDDHCRGIALVLA 232

Query: 239 ETRASGR--LICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLF-EL 295
             RA     +     + +      +L +    +    K + ++G +  +S+D  K+  EL
Sbjct: 233 GGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHDLRYSLDGGKIEREL 292

Query: 296 GF 297
           G+
Sbjct: 293 GY 294

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score =  111 bits (279), Expect = 5e-29
 Identities = 52/318 (16%), Positives = 103/318 (32%), Gaps = 31/318 (9%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           +TGG GFI + +V+ ++         +        +  L +++ +  R     AD+    
Sbjct: 5   ITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISES-NRYNFEHADICDSA 63

Query: 66  SFDEAIQG--VDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKK--------AK 115
                 +    D V H A+   V       A  I+  I GT  +L   +K         K
Sbjct: 64  EITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKK 123

Query: 116 SVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAK 175
           +  R    S+           +V                 +  Y+ +K  ++       +
Sbjct: 124 NNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRR 183

Query: 176 DCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGE------YPNTTVGFVHIDDV 229
             G+  +V N S   GP   P      L+ L ++  L G+        +    +++++D 
Sbjct: 184 TYGLPTIVTNCSNNYGPYHFP----EKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH 239

Query: 230 VGAHILAMEETRASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQE---------G 280
             A  + + E +A             +  +                S +E         G
Sbjct: 240 ARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPG 299

Query: 281 DNSPHSMDTSKLF-ELGF 297
            +  +++D  K+  ELG+
Sbjct: 300 HDRRYAIDAGKISRELGW 317

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 99.1 bits (246), Expect = 2e-24
 Identities = 41/269 (15%), Positives = 80/269 (29%), Gaps = 23/269 (8%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLS---KVGFLWELNGAEERLKIMKADLL 62
           +TG TG   ++L + LL+KG+ V    R     +         + +    +  +   DL 
Sbjct: 6   ITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLS 65

Query: 63  MEGSFDEAIQG--VDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKA--KSVK 118
              +    ++    D V++  +   V           D    GTL +L + +    +   
Sbjct: 66  DTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKT 125

Query: 119 RVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCG 178
           R    S+       +   Q  P  E+    P         YA AK  A        +  G
Sbjct: 126 RFYQASTSEL----YGLVQEIPQKETTPFYPRSP------YAVAKLYAYWITVNYRESYG 175

Query: 179 IDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYP------NTTVGFVHIDDVVGA 232
           +            P       +  +           E        ++   + H  D V  
Sbjct: 176 MYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKM 235

Query: 233 HILAMEETRASGRLICSSSVAHWSPIIEM 261
             + +++ +    +I +         +EM
Sbjct: 236 QWMMLQQEQPEDFVIATGVQYSVRQFVEM 264

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 90.4 bits (223), Expect = 2e-21
 Identities = 44/306 (14%), Positives = 88/306 (28%), Gaps = 27/306 (8%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           VTG TG   A+L K LL+KG+ V   V      ++  +     G E  ++    D+    
Sbjct: 5   VTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR--WRLRELGIEGDIQYEDGDMADAC 62

Query: 66  SFDEAIQGVDGVFHTASPVLVPYDNNIQATL--IDPCIKGTLNVLSSCKKAKSVKRVVLT 123
           S   A+                   +    +        G  ++L + ++     R    
Sbjct: 63  SVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQA 122

Query: 124 SSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVV 183
           S+                      D +   +    Y  AK           +  G+    
Sbjct: 123 STSEMFGLIQA----------ERQDENTPFYPRSPYGVAKLYGHWITVNYRESFGLHASS 172

Query: 184 VNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG-------FVHIDDVVGAHILA 236
                   PL   +   T  +  A+ +   G+     +G       +    D V A  L 
Sbjct: 173 GILFNHESPLRGIEF-VTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLM 231

Query: 237 MEETRASGRLICS----SSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKL 292
           +++ +A   ++ +    +         E +   Y  +        +  +      + +K 
Sbjct: 232 LQQDKADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKA 291

Query: 293 F-ELGF 297
              LG+
Sbjct: 292 QRVLGW 297

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 88.0 bits (217), Expect = 1e-20
 Identities = 33/190 (17%), Positives = 60/190 (31%), Gaps = 31/190 (16%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           + G  G + + + + L  +G +        E                       +LL   
Sbjct: 7   IAGHRGMVGSAIRRQLEQRGDVELVLRTRDE----------------------LNLLDSR 44

Query: 66  SFDEAIQG--VDGVFHTASPVLVPYDNN-IQATLIDPCIKGTLNVLSSCKKAKSVKRVVL 122
           +  +      +D V+  A+ V     NN   A  I   +    N++ +  +   V +++ 
Sbjct: 45  AVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLLF 103

Query: 123 TSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMV 182
             S       +      P+ ES        +  N  YA AK    K      +  G D  
Sbjct: 104 LGSSCI----YPKLAKQPMAESELLQGT-LEPTNEPYAIAKIAGIKLCESYNRQYGRDYR 158

Query: 183 VVNPSFVVGP 192
            V P+ + GP
Sbjct: 159 SVMPTNLYGP 168

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 88.1 bits (217), Expect = 1e-20
 Identities = 53/299 (17%), Positives = 101/299 (33%), Gaps = 10/299 (3%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNG-AEERLKIMKADLLME 64
           VTGG GFI ++ V  + +    V  TV D   L+  G    L     +R++++  D+   
Sbjct: 7   VTGGAGFIGSNFVHYVYNNHPDVHVTVLD--KLTYAGNKANLEAILGDRVELVVGDIADA 64

Query: 65  GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVL-SSCKKAKSVKRVVLT 123
              D+     D + H A+        N  +  I     GT  +L ++ K       V   
Sbjct: 65  ELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTD 124

Query: 124 SSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVV 183
                +  R D           ++        +  Y+  K  ++       +  G+   +
Sbjct: 125 EVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSP-YSSTKAASDLIVKAWVRSFGVKATI 183

Query: 184 VNPSFVVGPLLAPQP--TSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETR 241
            N S   GP    +      +  ILA +K            ++H +D        + + R
Sbjct: 184 SNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGR 243

Query: 242 ASGRLICSSSVAHW--SPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLF-ELGF 297
                +  +         +  +L+            + + G +  +++D SKL  ELG+
Sbjct: 244 MGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDASKLRDELGW 302

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 84.6 bits (208), Expect = 3e-19
 Identities = 56/300 (18%), Positives = 98/300 (32%), Gaps = 20/300 (6%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           +TG  GFIA+H+ + L  +GH V  +     D  K   + E    +E       DL +  
Sbjct: 20  ITGAGGFIASHIARRLKHEGHYVIAS-----DWKKNEHMTEDMFCDE---FHLVDLRVME 71

Query: 66  SFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSS 125
           +  +  +GVD VF+ A+ +          ++I          +    +   +KR      
Sbjct: 72  NCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFF---Y 128

Query: 126 CSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVN 185
            SS     + +Q+   N S      +       +   K   E+      KD GI+  +  
Sbjct: 129 ASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGR 188

Query: 186 PSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG-------FVHIDDVVGAHILAME 238
              + GP    +            K           G       F  ID+ V   +   +
Sbjct: 189 FHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTK 248

Query: 239 ETRASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFE-LGF 297
                   I S  +   + + EM+ +              EG    +S D + + E LG+
Sbjct: 249 SDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPEGVRGRNS-DNNLIKEKLGW 307

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.9 bits (206), Expect = 5e-19
 Identities = 47/255 (18%), Positives = 82/255 (32%), Gaps = 20/255 (7%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVR--DPEDLSKVGFLWELNGA--EERLKIMKADL 61
           +TG TG   ++L + LL+KG+ V   VR     +  ++  L++   A  E  +K+   DL
Sbjct: 6   ITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDL 65

Query: 62  LMEGSFDEAIQGVDG--VFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKR 119
                  + I  V    +++  +   V    ++     D    GTL +L + K    +  
Sbjct: 66  TDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINS 125

Query: 120 VVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGI 179
           V    + +S  Y     Q  P  E+    P         Y  AK  A        +   +
Sbjct: 126 VKFYQASTSELY--GKVQEIPQKETTPFYPRSP------YGAAKLYAYWIVVNFREAYNL 177

Query: 180 DMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEY------PNTTVGFVHIDDVVGAH 233
             V         P       +  +        L           +    + H  D V A 
Sbjct: 178 FAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAM 237

Query: 234 ILAMEETRASGRLIC 248
            L ++       +I 
Sbjct: 238 WLMLQNDEPEDFVIA 252

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 82.7 bits (203), Expect = 1e-18
 Identities = 61/311 (19%), Positives = 105/311 (33%), Gaps = 22/311 (7%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNG-AEERLKIMKADLLME 64
           VTGG+G+I +H    LL  GH V   + D    SK   L  +     +    ++ D+  E
Sbjct: 5   VTGGSGYIGSHTCVQLLQNGHDV--IILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNE 62

Query: 65  GSFDEAIQ--GVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVL 122
               E +    +D V H A    V           D  + GTL ++S+ + A  VK  + 
Sbjct: 63  ALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNFIF 121

Query: 123 TSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMV 182
           +SS +    +     V          P       +          +  W IA     + V
Sbjct: 122 SSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPV 181

Query: 183 VVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYP-----------NTTVGFVHIDDVVG 231
             +PS  +G      P + +  I  +  G R                    ++H+ D+  
Sbjct: 182 GAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLAD 241

Query: 232 AHILAMEETRASGRL----ICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSM 287
            H++AME+      +    + +        ++                 ++EGD   +  
Sbjct: 242 GHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYWA 301

Query: 288 DTSKLF-ELGF 297
           D SK   EL +
Sbjct: 302 DASKADRELNW 312

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 79.4 bits (194), Expect = 1e-17
 Identities = 40/271 (14%), Positives = 87/271 (32%), Gaps = 36/271 (13%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           + GGTG+I   +V A +  GH      R     +       L   +   K+++A L    
Sbjct: 8   IVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQ 67

Query: 66  SFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSS 125
              +A++ VD V    +  ++ +            I   L ++ + K+A ++KR + +  
Sbjct: 68  RLVDALKQVDVVISALAGGVLSH-----------HILEQLKLVEAIKEAGNIKRFLPSEF 116

Query: 126 CSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVN 185
                       + P    H   P      +               R  +   I    V+
Sbjct: 117 G-----------MDPDIMEHALQPGSITFIDKRK----------VRRAIEAASIPYTYVS 155

Query: 186 PSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRASGR 245
            +   G            ++    K L     N    +V  DDV    I ++++ +   +
Sbjct: 156 SNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNK 215

Query: 246 ---LICSSSVAHWSPIIEML-KATYPSYPYE 272
              +    ++     +I++  + +  +    
Sbjct: 216 TMYIRPPMNILSQKEVIQIWERLSEQNLDKI 246

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 77.2 bits (188), Expect = 4e-17
 Identities = 38/268 (14%), Positives = 76/268 (28%), Gaps = 30/268 (11%)

Query: 1   MPEYCVTGGTGFIAAHLVKALLDKGH--MVRTTVRDPEDLSKVGFLWELNGAEERLKIMK 58
           +P   VTG +G     + K L +     + +  VR  +   K+G             +  
Sbjct: 3   LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG---------GEADVFI 53

Query: 59  ADLLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVK 118
            D+    S + A QG+D +    S V              P                  K
Sbjct: 54  GDITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQK 113

Query: 119 RVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCG 178
             +  +  + +++      +   N  H  +     +  +W         ++A +   D G
Sbjct: 114 NQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWK--------RKAEQYLADSG 165

Query: 179 IDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAME 238
               ++    ++      +          ++ G   E   T    V   DV    I A+ 
Sbjct: 166 TPYTIIRAGGLLDKEGGVRE---------LLVGKDDELLQTDTKTVPRADVAEVCIQALL 216

Query: 239 ETRASGRL--ICSSSVAHWSPIIEMLKA 264
              A  +   + S      +P  +    
Sbjct: 217 FEEAKNKAFDLGSKPEGTSTPTKDFKAL 244

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 77.3 bits (189), Expect = 1e-16
 Identities = 65/311 (20%), Positives = 108/311 (34%), Gaps = 31/311 (9%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMV----RTTVRDPEDLSKVGFLWELNGAEERLKIMKADL 61
           +TG  GFI ++L++ LL     V            +L +V  L          K ++ D+
Sbjct: 21  ITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQW-SNFKFIQGDI 79

Query: 62  LMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVV 121
                 + A  GVD V H A+   VP   N   T     I G LN+L + + AK      
Sbjct: 80  RNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTY 139

Query: 122 LTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDM 181
             SS       +      P  E     P         YA  K + E  A   ++  G   
Sbjct: 140 AASSS-----TYGDHPGLPKVEDTIGKPLSP------YAVTKYVNELYADVFSRCYGFST 188

Query: 182 VVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYP------NTTVGFVHIDDVVGAHIL 235
           + +    V G    P      ++       ++G+         T+  F +I++ V A++L
Sbjct: 189 IGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLL 248

Query: 236 AMEETRASGRLICSSSVAHWSPIIEMLKA-----TYPSYPYESK---CSKQEGDNSPHSM 287
           A      +   + + +V   + + ++  A           Y  +      +EGD      
Sbjct: 249 AATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLA 308

Query: 288 DTSKLF-ELGF 297
           D SK    LG+
Sbjct: 309 DISKAAKLLGY 319

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 77.1 bits (188), Expect = 1e-16
 Identities = 49/318 (15%), Positives = 109/318 (34%), Gaps = 30/318 (9%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEE--RLKIMKADLLM 63
           +TGG GF+ ++L    L +G  +   V D  +LS+ G    L+        + +  D+  
Sbjct: 5   ITGGCGFLGSNLASFALSQGIDL--IVFD--NLSRKGATDNLHWLSSLGNFEFVHGDIRN 60

Query: 64  EGSFDEAIQGV--DGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVV 121
           +      I     D  FH A  V +    +      +  + GTLN+L + ++  S   ++
Sbjct: 61  KNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNII 120

Query: 122 LTSSCSSIRYRHDAQQV------SPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAK 175
            +S+          +        + +++ +  D      ++  Y  +K  A++     A+
Sbjct: 121 YSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYAR 180

Query: 176 DCGIDMVVVNPSFVVG-----PLLAPQPTSTLLLILAMVKGLRGEYP-----NTTVGFVH 225
             G++ VV   S + G                   + +  G+   +            +H
Sbjct: 181 IFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLH 240

Query: 226 IDDVVGAHILAMEET-RASGRLICSSSVAHWS----PIIEMLKATYPSYPYESKCSKQEG 280
            +D++  +  A+    +  G           S     + ++L+         +    +E 
Sbjct: 241 AEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVRES 300

Query: 281 DNSPHSMDTSKLF-ELGF 297
           D      D  K+   + +
Sbjct: 301 DQRVFVADIKKITNAIDW 318

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 70.9 bits (172), Expect = 1e-14
 Identities = 51/310 (16%), Positives = 95/310 (30%), Gaps = 26/310 (8%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLS----KVGFLWELNGAEERLKIMKADL 61
           +TG TG   ++L + LL KG+ V   +R   + +       ++   N  +  +K+  ADL
Sbjct: 6   ITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADL 65

Query: 62  LMEGSFDEAIQ--GVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKR 119
               S    I     D V++ A+   V     I     D    G L +L + +       
Sbjct: 66  TDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSG 125

Query: 120 VVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGI 179
             +    +       +    P +E+    P         YA +K  A        +  G+
Sbjct: 126 RTVKYYQAGSSEMFGSTP-PPQSETTPFHPRS------PYAASKCAAHWYTVNYREAYGL 178

Query: 180 DMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG-------FVHIDDVVGA 232
                       P        T  +  A+ +   G      +G       +    D V A
Sbjct: 179 FACNGILFNHESPRRGENF-VTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEA 237

Query: 233 HILAMEETRASGRLICSSSVAHWS----PIIEMLKATYPSYPYESKCSKQEGDNSPHSMD 288
             L +++ +    ++ +                L   +  Y    +   +  +      D
Sbjct: 238 MWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGD 297

Query: 289 TSKLF-ELGF 297
            SK    LG+
Sbjct: 298 ASKAKEVLGW 307

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 70.5 bits (171), Expect = 2e-14
 Identities = 59/320 (18%), Positives = 110/320 (34%), Gaps = 32/320 (10%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNG-AEERLKIMKADLLME 64
           VTGG G+I +H V  L++ G+     V D    S    +  L    +  +   + DL   
Sbjct: 6   VTGGAGYIGSHTVVELIENGYDC--VVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDR 63

Query: 65  GSFDEAIQ--GVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVL 122
              ++  +   +D V H A    V     I        I GT+ +L   ++  +V + V 
Sbjct: 64  KGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQ-YNVSKFVF 122

Query: 123 TSSCSSIRYRHDAQQVSPLNESHWSDP----DYCKHYNLWYAYAKTIAEKEAWRIAKDCG 178
           +SS +          + P+ E     P     + K+           ++K++W+ A    
Sbjct: 123 SSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRY 182

Query: 179 IDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYP-----NTTVGFVHIDDVVGAH 233
            + +  +PS ++G      P + L  +  +  G R +         +     I D +   
Sbjct: 183 FNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVV 242

Query: 234 ILAMEETRASGRL--------------ICSSSVAHWSPIIEML-KATYPSYPYESKCSKQ 278
            LA     A   L              + S   +    +     KA+    PY+    ++
Sbjct: 243 DLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVT-GRR 301

Query: 279 EGDNSPHSMDTSKLF-ELGF 297
            GD    +    +   EL +
Sbjct: 302 AGDVLNLTAKPDRAKRELKW 321

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.4 bits (163), Expect = 5e-14
 Identities = 39/271 (14%), Positives = 67/271 (24%), Gaps = 68/271 (25%)

Query: 1   MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKAD 60
           + +  + G TG      +   +  G+ V   VRD   L   G             ++  D
Sbjct: 3   VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGP--------RPAHVVVGD 54

Query: 61  LLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRV 120
           +L     D+ + G D V              + +      +           KA  V +V
Sbjct: 55  VLQAADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVA--------AMKAHGVDKV 106

Query: 121 VLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGID 180
           V  +S                      DP                      ++ ++ G+ 
Sbjct: 107 VACTSA-----------------FLLWDPTKVPPRLQAVTDDHIRMH----KVLRESGLK 145

Query: 181 MVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEET 240
            V V P  +    L    T TL                     +   D+    +  +   
Sbjct: 146 YVAVMPPHIGDQPLTGAYTVTL-------------DGRGPSRVISKHDLGHFMLRCLTTD 192

Query: 241 RASGRLICSSSVAHWSPIIEMLKATYPSYPY 271
              G                   +TYPS+ Y
Sbjct: 193 EYDG------------------HSTYPSHQY 205

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 66.6 bits (161), Expect = 4e-13
 Identities = 28/259 (10%), Positives = 60/259 (23%), Gaps = 36/259 (13%)

Query: 5   CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLL-M 63
            V G TG   A L++     GH VR  V   + L     L  +        + +  LL  
Sbjct: 7   AVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEE-LQAIPNVT----LFQGPLLNN 61

Query: 64  EGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLT 123
               D   +G    F   +                  I    ++  + K+A +++  + +
Sbjct: 62  VPLMDTLFEGAHLAFINTTSQ------------AGDEIAIGKDLADAAKRAGTIQHYIYS 109

Query: 124 SSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVV 183
           S                    H     +         +      ++    +      +  
Sbjct: 110 SMP-----------------DHSLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYN 152

Query: 184 VNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRAS 243
            N + +  PL   +                   P        +   +        +    
Sbjct: 153 NNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEH-DVGPALLQIFKDGPQKWNG 211

Query: 244 GRLICSSSVAHWSPIIEML 262
            R+  +        +    
Sbjct: 212 HRIALTFETLSPVQVCAAF 230

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 61.7 bits (148), Expect = 2e-11
 Identities = 48/261 (18%), Positives = 84/261 (32%), Gaps = 42/261 (16%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNG-AEERLKIMKADLLME 64
           + G TG+I  H+ KA LD GH     VR+    S       L         I+   +   
Sbjct: 8   LIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDH 67

Query: 65  GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
            S  EA++ VD V  T                    I+  +N++ + K+  +VKR   + 
Sbjct: 68  ASLVEAVKNVDVVISTVGS---------------LQIESQVNIIKAIKEVGTVKRFFPSE 112

Query: 125 SCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVV 184
                         + ++  H  +P                      R  +  GI    V
Sbjct: 113 F------------GNDVDNVHAVEPAKSVFEVKAK----------VRRAIEAEGIPYTYV 150

Query: 185 NPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRASG 244
           + +   G  L        L      K +     N  V FV  +D+    I A+++ R   
Sbjct: 151 SSNCFAGYFL-RSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLN 209

Query: 245 R---LICSSSVAHWSPIIEML 262
           +   L   ++    + ++ + 
Sbjct: 210 KTLYLRLPANTLSLNELVALW 230

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 55.2 bits (131), Expect = 2e-09
 Identities = 38/306 (12%), Positives = 80/306 (26%), Gaps = 17/306 (5%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           VTG TGF    L   L   G  V+        +     L+E     + ++    D+  + 
Sbjct: 13  VTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPS---LFETARVADGMQSEIGDIRDQN 69

Query: 66  SFDEAIQGVDGVFHTASPVLVPYDN--NIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLT 123
              E+I+                    +         + GT+ +L + +    VK VV  
Sbjct: 70  KLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNI 129

Query: 124 SSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVV 183
           +S      +               DP            +               G  +  
Sbjct: 130 TSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVAT 189

Query: 184 VNPSFVVGPLLAPQPTSTLLLILAMVKG-----------LRGEYPNTTVGFVHIDDVVGA 232
           V    V+G            ++ A  +               ++    +    +      
Sbjct: 190 VRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLLLAQKLY 249

Query: 233 HILAMEETRASGRLICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKL 292
              A      +     + +    + + +M+K       ++   +    +     +D SK 
Sbjct: 250 TDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHEAHYLKLDCSKA 309

Query: 293 F-ELGF 297
             +LG+
Sbjct: 310 KMQLGW 315

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.0 bits (123), Expect = 3e-08
 Identities = 44/322 (13%), Positives = 99/322 (30%), Gaps = 38/322 (11%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVR-----TTVRDPEDLSKVGFLWELNGAEERLKIMKAD 60
           VTGG G+I +H V  LL+ G++                               ++  + D
Sbjct: 7   VTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMD 66

Query: 61  LLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRV 120
           +L +G+     +    +       L     ++Q     P     +N+  + +  + +K  
Sbjct: 67  ILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQ----KPLDYYRVNLTGTIQLLEIMKAH 122

Query: 121 VLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGID 180
            + +   S              +           Y     + + +          D   +
Sbjct: 123 GVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLC---QADKTWN 179

Query: 181 MVVVNPSFVVGPLLA------PQPTSTLLLILAMVKGLRGEYPNTTVG------------ 222
            V++      G   +      PQ     L+       +         G            
Sbjct: 180 AVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVR 239

Query: 223 -FVHIDDVVGAHILAMEETRASGRL----ICSSSVAHWSPIIEML-KATYPSYPYESKCS 276
            ++H+ D+   HI A+ + +         + + +      +++ + KA+    PY+   +
Sbjct: 240 DYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVV-A 298

Query: 277 KQEGDNSPHSMDTSKLF-ELGF 297
           ++EGD +    + S    ELG+
Sbjct: 299 RREGDVAACYANPSLAQEELGW 320

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.9 bits (120), Expect = 4e-08
 Identities = 31/259 (11%), Positives = 70/259 (27%), Gaps = 45/259 (17%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           + G +G     L+K +L++G   + T+                    R K+   +     
Sbjct: 19  ILGASGETGRVLLKEILEQGLFSKVTLIG------------------RRKLTFDEEA--- 57

Query: 66  SFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSS 125
                       +   +  +V ++                  L + +     +  V    
Sbjct: 58  ------------YKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDR 105

Query: 126 CSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVN 185
              ++    A+     + +  S     K  N  Y   K    +   ++ +       V  
Sbjct: 106 DYVLKSAELAKAGGCKHFNLLSSKGADKSSNFLYLQVK---GEVEAKVEELKFDRYSVFR 162

Query: 186 PSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRASGR 245
           P  ++      +P   L+        L       +   V +  VV A +  +   R    
Sbjct: 163 PGVLLCDRQESRPGEWLVRKF--FGSLPD--SWASGHSVPVVTVVRAMLNNVVRPRDKQM 218

Query: 246 LICSSSVAHWSPIIEMLKA 264
            +  +       I ++ KA
Sbjct: 219 ELLEN-----KAIHDLGKA 232

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 49.8 bits (117), Expect = 7e-08
 Identities = 25/244 (10%), Positives = 56/244 (22%), Gaps = 48/244 (19%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           + G TG    HL+  +L +  + +      + L++   L    G    L           
Sbjct: 7   LAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQL------- 59

Query: 66  SFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSS 125
                   +D  F      +    +      +D                           
Sbjct: 60  -----DGSIDTAFCCLGTTIKEAGSEEAFRAVDFD------------------------- 89

Query: 126 CSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVN 185
                     ++   +   H+              +   +  +    + +     + +  
Sbjct: 90  ----LPLAVGKRALEMGARHYLVVSALGADAKSSIFYNRVKGELEQALQEQGWPQLTIAR 145

Query: 186 PSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRASGR 245
           PS + GP    +    L   +A +              +   D+  A      E     R
Sbjct: 146 PSLLFGPREEFRLAEILAAPIARI-------LPGKYHGIEACDLARALWRLALEEGKGVR 198

Query: 246 LICS 249
            + S
Sbjct: 199 FVES 202

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 49.6 bits (116), Expect = 2e-07
 Identities = 35/210 (16%), Positives = 61/210 (29%), Gaps = 23/210 (10%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVR----TTVRDPEDLSKVGFLWELNGAEERL------- 54
           V GG G+        L  K + V        R  +    +  L  +    +R+       
Sbjct: 6   VIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT 65

Query: 55  ----KIMKADLLMEGSFDEAIQ-----GVDGVFHTASPVLVPYDNNIQATLIDPCIKGTL 105
               ++   D+       E+ +      V       S      D +         + GTL
Sbjct: 66  GKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTL 125

Query: 106 NVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPD---YCKHYNLWYAYA 162
           NVL + K+      +V   +       +   +   +  +H    D   Y K  + +Y  +
Sbjct: 126 NVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLS 185

Query: 163 KTIAEKEAWRIAKDCGIDMVVVNPSFVVGP 192
           K           K  GI    +N   V G 
Sbjct: 186 KVHDSHNIAFTCKAWGIRATDLNQGVVYGV 215

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 47.3 bits (110), Expect = 9e-07
 Identities = 47/295 (15%), Positives = 90/295 (30%), Gaps = 13/295 (4%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           VTGG GFI +++VKAL DKG      V + +D +K   L +LN A+    + K D L++ 
Sbjct: 4   VTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIAD---YMDKEDFLIQI 60

Query: 66  SFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSS 125
              E    V+ +FH  +       +       +      L      ++   +      + 
Sbjct: 61  MAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATY 120

Query: 126 CSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVN 185
                   ++++       +         Y                          V   
Sbjct: 121 GGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEA-------NSQIVGFRYFNVYGP 173

Query: 186 PSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETRASGR 245
                G + +        L       L     N    FV++ DV   ++  +E   +   
Sbjct: 174 REGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGIF 233

Query: 246 LICSSSVAHWSPIIEMLKATY--PSYPYESKCSKQEGDNSPHS-MDTSKLFELGF 297
            + +     +  + +   A +      Y     K +G     +  D + L   G+
Sbjct: 234 NLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGY 288

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 44.9 bits (104), Expect = 5e-06
 Identities = 36/267 (13%), Positives = 77/267 (28%), Gaps = 14/267 (5%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
           + G  GFI  HL + LL + H     +    D+        LN        ++ D+ +  
Sbjct: 5   ILGVNGFIGNHLTERLLREDHYEVYGL----DIGSDAISRFLN--HPHFHFVEGDISIHS 58

Query: 66  SFDE-AIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS 124
            + E  ++  D V    +             + +   +  L ++  C K +       TS
Sbjct: 59  EWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTS 118

Query: 125 SCSSIRYRHDAQQVSPLNESHWSDP-----DYCKHYNLWYAYAKTIAEKEAWRIAKDCGI 179
               +       +          +         K       +A    E   + + +    
Sbjct: 119 EVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNW 178

Query: 180 DMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAME- 238
               ++         +   T  +L ++        +       F  I D + A    +E 
Sbjct: 179 MGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIEN 238

Query: 239 -ETRASGRLICSSSVAHWSPIIEMLKA 264
              R  G +I   +  + + I E+ + 
Sbjct: 239 AGNRCDGEIINIGNPENEASIEELGEM 265

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 42.9 bits (99), Expect = 2e-05
 Identities = 10/42 (23%), Positives = 17/42 (40%)

Query: 6  VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWEL 47
          +TG  G +   + K L  K   V  T     D++ V  + + 
Sbjct: 6  ITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKF 47

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 42.5 bits (98), Expect = 3e-05
 Identities = 57/352 (16%), Positives = 101/352 (28%), Gaps = 61/352 (17%)

Query: 6   VTGGTGFIAAHLVKALL-DKGHMVR---------------TTVRDPEDLSKVGFLWELNG 49
           V GG G+I +H V+ALL D  H V                 T  +     +     +   
Sbjct: 7   VCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPW 66

Query: 50  AEERLKIMKADLLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLS 109
           A+    +   D+  E   +        +                   +       + +L 
Sbjct: 67  ADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILR 126

Query: 110 SCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKE 169
             +     K   +  S S+  + +        N             +  Y  +K IAE+ 
Sbjct: 127 LLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPES-PYGESKLIAERM 185

Query: 170 AWRIAKDCGIDMVVVNPSFVVGP------------------------LLAPQPTSTLLLI 205
               A+  GI  + +      G                         +    P   L + 
Sbjct: 186 IRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIH 245

Query: 206 LAMVKG----LRGEYPNTTVG-----FVHIDDVVGAHILAMEETRASGRL---------- 246
                     + G    T  G     +VH+ D+  AHILA++     G            
Sbjct: 246 EDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFN 305

Query: 247 ICSSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFE-LGF 297
           + +S       +IE+ + T        +C ++EGD +     + K  E LG+
Sbjct: 306 LGTSRGYSVREVIEVARKTTGHPIPVRECGRREGDPAYLVAASDKAREVLGW 357

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 41.9 bits (96), Expect = 6e-05
 Identities = 8/31 (25%), Positives = 15/31 (48%)

Query: 6  VTGGTGFIAAHLVKALLDKGHMVRTTVRDPE 36
          + G TG +   L ++L   G+++   V   E
Sbjct: 5  LFGKTGQVGWELQRSLAPVGNLIALDVHSKE 35

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 39.6 bits (92), Expect = 2e-04
 Identities = 30/254 (11%), Positives = 76/254 (29%), Gaps = 41/254 (16%)

Query: 6   VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG 65
                G I     + L+ +       +   E+ + +  L      +  +     D+ +  
Sbjct: 10  FVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKA-INPKVNITFHTYDVTVPV 68

Query: 66  S-----FDEAIQGVDGVFHTASPVLVPYDNNIQATL---IDPCIKGTLNVLSSCKKAKSV 117
           +       +    +  V    +   +  D+ I+ T+       +  T  +L    K K  
Sbjct: 69  AESKKLLKKIFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGG 128

Query: 118 KRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYC--KHYNLWYAYAKTIAEKEAWRIAK 175
              ++ + CS   +    Q            P Y   K   +  ++  ++A     ++A 
Sbjct: 129 PGGIIANICSVTGFNAIHQV-----------PVYSASKAAVV--SFTNSLA-----KLAP 170

Query: 176 DCGIDMVVVNPSFVVGPLLAPQPTSTLL--LILAMVKGLRGEYPNTTVGFVHIDDVVGAH 233
             G+    +NP     PL+    +   +   +  ++     +            +  G +
Sbjct: 171 ITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTS----------EQCGQN 220

Query: 234 ILAMEETRASGRLI 247
            +   E   +G + 
Sbjct: 221 FVKAIEANKNGAIW 234

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 37.8 bits (86), Expect = 0.001
 Identities = 36/241 (14%), Positives = 66/241 (27%), Gaps = 24/241 (9%)

Query: 6   VTGGTGFIAAHLVKALLD---KGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKAD-- 60
           +TG    +   LVKALL+       + TT R+ E   ++  L + +     L+I   +  
Sbjct: 7   ITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFD 66

Query: 61  -----------LLMEGSFDEAIQGVDGVFHTASPVLVPYD--NNIQATLIDPCIKGTLNV 107
                      +  +   +           +A    V      +   T     I      
Sbjct: 67  AYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKAC 126

Query: 108 LSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAE 167
           L   KKA             +          S L     +       Y    +      +
Sbjct: 127 LPLLKKAAKANESQPMGVGRAAIINMS----SILGSIQGNTDGGMYAYRTSKSALNAATK 182

Query: 168 KEAWRIAKDCGIDMVVVNPSFVVGPLLAPQ-PTSTLLLILAMVKGLRGEYPNTTVGFVHI 226
             +  +     I  V ++P +V   +     P         +V+ +         GFV+ 
Sbjct: 183 SLSVDLYPQ-RIMCVSLHPGWVKTDMGGSSAPLDVPTSTGQIVQTISKLGEKQNGGFVNY 241

Query: 227 D 227
           D
Sbjct: 242 D 242

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	305
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	100.0
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	100.0
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	100.0
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	100.0
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	100.0
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	100.0
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	100.0
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	100.0
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	100.0
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	100.0
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	100.0
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	100.0
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	100.0
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	100.0
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	100.0
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	100.0
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.98
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.97
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.96
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.96
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.95
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.95
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.92
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.9
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.89
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.89
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.89
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.89
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.89
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.89
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.89
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.89
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.89
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.89
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.89
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.88
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.88
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.88
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.88
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.88
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.88
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.88
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.88
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.88
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.88
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.88
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.87
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.87
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.87
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.87
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.87
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.87
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.86
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.86
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.86
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.85
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.85
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.85
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.85
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.85
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.85
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.85
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.84
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.84
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.84
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.83
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.83
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.83
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.83
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.82
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.82
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.81
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.8
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.8
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.78
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.77
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.76
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.76
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.76
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.76
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.74
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.71
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.71
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.69
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.68
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.65
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.6
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.55
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.53
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.39
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.68
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.57
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.53
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	98.51
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	98.4
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	98.36
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.35
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	98.35
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	98.31
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	98.3
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	98.3
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	98.24
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	98.18
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	98.09
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	98.07
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	98.06
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.03
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	98.02
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	98.0
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.99
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	97.98
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.97
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	97.92
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.92
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	97.91
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.91
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	97.9
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.89
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.88
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	97.87
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.84
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.82
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.82
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.8
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.74
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.74
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.72
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.7
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	97.7
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.65
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.65
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.64
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	97.62
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.6
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.6
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.58
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	97.58
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.56
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.47
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.47
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.47
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	97.45
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	97.42
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.38
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.36
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.32
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	97.3
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.3
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.24
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	97.23
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.23
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.2
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.17
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	97.13
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.13
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	97.11
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	97.08
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	97.04
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	96.98
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.96
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.94
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	96.94
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	96.92
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.9
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	96.9
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	96.9
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	96.9
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	96.88
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	96.85
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	96.84
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	96.83
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.81
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	96.78
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	96.76
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.75
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.75
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	96.72
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	96.71
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	96.7
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	96.66
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	96.65
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	96.57
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	96.55
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	96.54
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	96.54
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	96.53
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	96.47
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.46
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	96.4
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	96.39
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	96.37
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	96.35
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.28
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	96.27
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.26
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	96.25
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.21
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.19
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.18
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	96.15
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	96.11
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	96.09
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.08
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	96.02
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	96.01
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	96.0
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	96.0
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	95.92
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	95.91
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.87
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	95.86
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.86
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	95.82
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	95.8
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	95.73
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	95.72
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	95.67
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	95.66
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	95.58
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.57
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	95.54
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	95.52
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	95.5
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	95.47
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.44
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.36
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	95.36
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	95.34
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	95.27
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	95.24
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.23
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	95.22
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.08
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	95.03
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	94.99
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	94.98
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	94.93
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	94.93
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	94.92
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	94.91
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.89
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	94.74
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	94.73
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	94.69
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	94.66
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	94.65
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.58
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	94.49
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	94.47
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	94.46
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	94.41
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	94.41
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	94.32
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	94.26
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	94.24
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	94.2
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	94.19
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	94.18
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	94.17
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	94.14
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	94.13
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	94.12
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	94.11
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.1
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	93.97
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	93.84
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.84
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	93.76
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	93.49
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	93.45
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	93.28
d1k3ta1	190	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.99
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	92.98
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	92.9
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	92.54
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	92.46
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	92.43
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	92.39
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	92.37
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	91.89
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	91.8
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	91.46
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	90.82
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	90.57
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.35
d1w5fa1	194	Cell-division protein FtsZ {Thermotoga maritima [T	89.92
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	89.88
d2b4ro1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.78
d1fmta2	206	Methionyl-tRNAfmet formyltransferase {Escherichia	89.68
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	89.44
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	89.37
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.08
d1u8fo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.88
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.79
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	88.75
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	88.66
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	88.52
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	88.31
d2vapa1	209	Cell-division protein FtsZ {Archaeon Methanococcus	88.24
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	88.11
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	88.05
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	87.94
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	87.9
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	87.72
d3cmco1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.68
d1rm4a1	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.58
d1uwva2	358	rRNA (Uracil-5-)-methyltransferase RumA, catalytic	87.49
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	87.27
d1m6ia1	213	Apoptosis-inducing factor (AIF) {Human (Homo sapie	87.03
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	86.82
d3coxa1	370	Cholesterol oxidase of GMC family {Brevibacterium	86.75
d2afhe1	289	Nitrogenase iron protein {Azotobacter vinelandii [	86.72
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	86.58
d1xk7a1	402	Crotonobetainyl-CoA:carnitine CoA-transferase, Cai	86.46
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	86.17
d1vkza2	90	Glycinamide ribonucleotide synthetase (GAR-syn), N	85.86
d1ofua1	198	Cell-division protein FtsZ {Pseudomonas aeruginosa	85.79
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	85.72
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	85.34
d1qkia1	203	Glucose 6-phosphate dehydrogenase, N-terminal doma	85.12
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	84.77
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	84.67
d1x74a1	359	2-methylacyl-CoA racemase Mcr {Mycobacterium tuber	84.66
d2vjma1	427	Formyl-CoA transferase {Oxalobacter formigenes [Ta	84.63
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	84.43
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	84.29
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	84.22
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	83.61
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	83.6
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	83.25
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	83.0
d1np3a2	182	Class I ketol-acid reductoisomerase (KARI) {Pseudo	82.81
d1ps9a2	162	2,4-dienoyl-CoA reductase, C-terminal domain {Esch	82.75
d1rq2a1	198	Cell-division protein FtsZ {Mycobacterium tubercul	82.71
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	82.56
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	82.47
d1q7ea_	417	Hypothetical protein YfdW {Escherichia coli [TaxId	82.45
d1kdga1	360	Flavoprotein domain of flavocytochrome cellobiose	82.39
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	82.21
d1h9aa1	195	Glucose 6-phosphate dehydrogenase, N-terminal doma	81.95
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	81.94
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	81.88
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	81.78
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	81.42
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	81.39
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	80.25
d2bs2a2	336	Fumarate reductase {Wolinella succinogenes [TaxId:	80.1

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.8e-47  Score=328.27  Aligned_cols=291  Identities=17%  Similarity=0.128  Sum_probs=222.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcc--cchhhhhh-ccCccCceEEEEccCCCcchHHHHhc--CCCE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDL--SKVGFLWE-LNGAEERLKIMKADLLMEGSFDEAIQ--GVDG   76 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~--~~~~~~~~-~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~   76 (305)
                      |.+||||||||||++|+++|+++|++|++++|.....  .....+.. ......+++++++|+.|.+.+.++++  ++|+
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   81 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE   81 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence            6788999999999999999999999999999964321  11111111 11224589999999999999999998  5699


Q ss_pred             EEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCc---cEEEEeccceeeeccCCCCCCcccCCCCCCCccccc
Q 039049           77 VFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSV---KRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCK  153 (305)
Q Consensus        77 Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~  153 (305)
                      |||+|+..+...+.+++..++++|+.++.+|+++|++. ++   +||||+||+++|+...    ..|++|+++..|.   
T Consensus        82 v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~-~~~~~~r~i~~SS~~vYG~~~----~~~~~E~~~~~P~---  153 (357)
T d1db3a_          82 VYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL-GLEKKTRFYQASTSELYGLVQ----EIPQKETTPFYPR---  153 (357)
T ss_dssp             EEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEEEEEEEGGGGTTCC----SSSBCTTSCCCCC---
T ss_pred             EEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCCCcEEEEEEchhhhCCCC----CCCcCCCCCCCCC---
Confidence            99999998877667777889999999999999999987 44   4799999999886532    3689999988876   


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC--chHHHHHHHHhcCCCC--CCC--CCccceeHH
Q 039049          154 HYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPT--STLLLILAMVKGLRGE--YPN--TTVGFVHID  227 (305)
Q Consensus       154 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~--~~~--~~~~~i~v~  227 (305)
                         ++|+.||+++|.+++.++++++++++++||+++|||+......  .....+.....+....  +++  ..++|+|++
T Consensus       154 ---~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~  230 (357)
T d1db3a_         154 ---SPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAK  230 (357)
T ss_dssp             ---SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHH
T ss_pred             ---ChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeec
Confidence               8899999999999999999999999999999999997544321  2234445555555433  333  489999999


Q ss_pred             HHHHHHHHhhcccccCceEEEe-cCCcCHHHHHHHHHHhCCCCC----CCCC-------------C--------------
Q 039049          228 DVVGAHILAMEETRASGRLICS-SSVAHWSPIIEMLKATYPSYP----YESK-------------C--------------  275 (305)
Q Consensus       228 D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~----~~~~-------------~--------------  275 (305)
                      |+|+++..+++++ .++.||++ ++.+|++|+++.+.+.+|...    .+..             +              
T Consensus       231 D~~~a~~~~~~~~-~~~~yni~sg~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (357)
T d1db3a_         231 DYVKMQWMMLQQE-QPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPR  309 (357)
T ss_dssp             HHHHHHHHTTSSS-SCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGG
T ss_pred             hHHHHHHHHHhCC-CCCeEEECCCCceehHHHHHHHHHHhCCccccccccccccchhhhhhcccccccccCceeEeeccc
Confidence            9999999999875 45789985 789999999999999986210    0000             0              


Q ss_pred             CCCCCCCCCcccchhHHHH-hCCCccc-cCCC
Q 039049          276 SKQEGDNSPHSMDTSKLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~-lg~~~~~-~l~e  305 (305)
                      ..++.....+.+|++|+++ ||| +|+ +|+|
T Consensus       310 ~~r~~~~~~~~~d~skakk~LGw-~P~~sl~e  340 (357)
T d1db3a_         310 YFRPAEVETLLGDPTKAHEKLGW-KPEITLRE  340 (357)
T ss_dssp             GCCCCC-CCCCBCCHHHHHHHCC-CCCSCHHH
T ss_pred             cCCCccccccccCHHHHHHHHCC-CcCCCHHH
Confidence            0023344556789999999 999 998 8764

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=100.00  E-value=1.1e-47  Score=327.48  Aligned_cols=289  Identities=21%  Similarity=0.241  Sum_probs=234.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEE------EeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTT------VRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVD   75 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~------~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d   75 (305)
                      |||||||||||||++|++.|+++|++|.+.      .+..... ....+... ....+++++.+|+.+..........+|
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~-~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~d   78 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAG-NRANLAPV-DADPRLRFVHGDIRDAGLLARELRGVD   78 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTC-CGGGGGGG-TTCTTEEEEECCTTCHHHHHHHTTTCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccc-cHhHhhhh-hcCCCeEEEEeccccchhhhccccccc
Confidence            579999999999999999999999865443      3221111 11111111 224589999999999998888888999


Q ss_pred             EEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCccccccc
Q 039049           76 GVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHY  155 (305)
Q Consensus        76 ~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  155 (305)
                      .|+|+|+..............+++|+.++.+++++|.+. ++++|||+||.++|+....    .+++|+++..|.     
T Consensus        79 ~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-~~~~~I~~Ss~~~yg~~~~----~~~~E~~~~~p~-----  148 (322)
T d1r6da_          79 AIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-GVGRVVHVSTNQVYGSIDS----GSWTESSPLEPN-----  148 (322)
T ss_dssp             EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGGGCCCSS----SCBCTTSCCCCC-----
T ss_pred             eEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHc-CCceEEEeecceeecCCCC----CCCCCCCCCCCC-----
Confidence            999999887665455566778899999999999999998 8999999999999887543    688999998887     


Q ss_pred             chhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCC-C--CCCccceeHHHHHHH
Q 039049          156 NLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEY-P--NTTVGFVHIDDVVGA  232 (305)
Q Consensus       156 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~i~v~D~a~~  232 (305)
                       +.|+.+|.++|.+++.+.++++++++++||+++|||+.... .....++..+..++++.+ +  .+.|+|+|++|+|++
T Consensus       149 -~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~-~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~a  226 (322)
T d1r6da_         149 -SPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPE-KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRG  226 (322)
T ss_dssp             -SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT-SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHH
T ss_pred             -CHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcC-cHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHH
Confidence             88999999999999999999999999999999999986543 345667788888877553 3  448999999999999


Q ss_pred             HHHhhcccccCceEEEe-cCCcCHHHHHHHHHHhCCCC-CCCCCCCCCCCCCCCcccchhHHHH-hCCCccc-cCCC
Q 039049          233 HILAMEETRASGRLICS-SSVAHWSPIIEMLKATYPSY-PYESKCSKQEGDNSPHSMDTSKLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       233 ~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-lg~~~~~-~l~e  305 (305)
                      +..+++++..++.||++ ++.+++.|+++.+.+.+|.. +.......++.....+.+|++|+++ ||| +|+ +|+|
T Consensus       227 i~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~-~p~~~~ee  302 (322)
T d1r6da_         227 IALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHDLRYSLDGGKIERELGY-RPQVSFAD  302 (322)
T ss_dssp             HHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEECCCTTCCCBCCBCCHHHHHHHCC-CCCSCHHH
T ss_pred             HHHHHhCCCCCCeeEEeecccchhHHHHHHHHHHhCCCccceeecCCCCCCCceeeeCHHHHHHHHCC-CCCCCHHH
Confidence            99999998888899995 78999999999999999753 2222333455666678899999999 999 998 7764

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=1.4e-46  Score=324.99  Aligned_cols=295  Identities=17%  Similarity=0.193  Sum_probs=227.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi~   79 (305)
                      ||||||||+||||++|+++|+++|++|++..++.........+.... ...+++++++|++|.+.+.++++  ++|+|||
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vih   79 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDIS-ESNRYNFEHADICDSAEITRIFEQYQPDAVMH   79 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTT-TCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhh-hcCCcEEEEccCCCHHHHHHHHHhCCCCEEEE
Confidence            57999999999999999999999998666555433222222232222 24589999999999999999887  6899999


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcC--------CccEEEEeccceeeeccCCCCC------CcccCCCC
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAK--------SVKRVVLTSSCSSIRYRHDAQQ------VSPLNESH  145 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--------~~~~~v~~SS~~~~~~~~~~~~------~~~~~E~~  145 (305)
                      |||......+..++...+++|+.++.+++++|++..        ++++|||+||..+|+.......      .....|++
T Consensus        80 lAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~  159 (361)
T d1kewa_          80 LAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETT  159 (361)
T ss_dssp             CCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTS
T ss_pred             CccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCC
Confidence            999876544455667789999999999999998751        3459999999999986533211      01223555


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCC-C--CCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEY-P--NTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~  222 (305)
                      +..|.      +.||.+|.++|.+++.+.++++++++++||+++|||+.... .....++.++..|+++.+ +  .+.|+
T Consensus       160 ~~~p~------s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~-~~i~~~i~~~~~g~~~~v~g~g~~~r~  232 (361)
T d1kewa_         160 AYAPS------SPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQIRD  232 (361)
T ss_dssp             CCCCC------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHHTCCEEEETTSCCEEE
T ss_pred             CCCCC------CHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcC-cHHHHHHHHHHcCCCcEEeCCCCeEEe
Confidence            55555      88999999999999999999999999999999999976542 345677888888887543 4  34899


Q ss_pred             ceeHHHHHHHHHHhhcccccCceEEEe-cCCcCHHHHHHHHHHhCCCC--------CCCCCCCCCCCCCCCcccchhHHH
Q 039049          223 FVHIDDVVGAHILAMEETRASGRLICS-SSVAHWSPIIEMLKATYPSY--------PYESKCSKQEGDNSPHSMDTSKLF  293 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~  293 (305)
                      |+|++|+|+++..++++...++.||++ +...++.|+++.+.+.++..        ........++.....+.+|++|++
T Consensus       233 ~i~v~D~a~ai~~~~~~~~~~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~  312 (361)
T d1kewa_         233 WLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKIS  312 (361)
T ss_dssp             EEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCBCCBCCHHHH
T ss_pred             CEEHHHHHHHHHHHHhcCCCCCeEEECCCCCcchHHHHhHhhhhcccccccccCcccceeecCCCCCCCceeeeCHHHHH
Confidence            999999999999999998888899995 67899999999998865210        011111235556677889999999


Q ss_pred             H-hCCCccc-cCCC
Q 039049          294 E-LGFVGFK-SVPQ  305 (305)
Q Consensus       294 ~-lg~~~~~-~l~e  305 (305)
                      + ||| +|+ +|+|
T Consensus       313 ~~lgw-~P~~~l~e  325 (361)
T d1kewa_         313 RELGW-KPLETFES  325 (361)
T ss_dssp             HHHCC-CCSCCHHH
T ss_pred             HHHCC-CCCCCHHH
Confidence            9 999 998 8754

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.1e-47  Score=320.05  Aligned_cols=282  Identities=21%  Similarity=0.238  Sum_probs=217.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      ||||||||+||||++|+++|+++|++|++++|.......  .+... ....++.....|+.     ..++.++|+|||+|
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~--~~~~~-~~~~~~d~~~~~~~-----~~~~~~~d~VihlA   73 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKR--NVEHW-IGHENFELINHDVV-----EPLYIEVDQIYHLA   73 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG--GTGGG-TTCTTEEEEECCTT-----SCCCCCCSEEEECC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHH--HHHHh-cCCCceEEEehHHH-----HHHHcCCCEEEECc
Confidence            789999999999999999999999999999874332111  11111 11224455555543     34566899999999


Q ss_pred             cccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCC-----CCCCcccccccc
Q 039049           82 SPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNES-----HWSDPDYCKHYN  156 (305)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~-----~~~~~~~~~~~~  156 (305)
                      +......+..++...+++|+.++.+|+++|++. ++ ||||+||+++|+....    .|++|+     ++..|.      
T Consensus        74 a~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~-~~-k~I~~SS~~vy~~~~~----~~~~e~~~~~~~~~~p~------  141 (312)
T d2b69a1          74 SPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-GA-RLLLASTSEVYGDPEV----HPQSEDYWGHVNPIGPR------  141 (312)
T ss_dssp             SCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TC-EEEEEEEGGGGBSCSS----SSBCTTCCCBCCSSSTT------
T ss_pred             ccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEEChheecCCCC----CCCCccccCCCCCCCCc------
Confidence            987754445566778999999999999999998 75 8999999999886432    345554     334444      


Q ss_pred             hhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC-chHHHHHHHHhcCCCCC-CC--CCccceeHHHHHHH
Q 039049          157 LWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPT-STLLLILAMVKGLRGEY-PN--TTVGFVHIDDVVGA  232 (305)
Q Consensus       157 ~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~-~~--~~~~~i~v~D~a~~  232 (305)
                      +.|+.+|.++|.+++.++++++++++++||+++|||+...... ....++.++..|+++.+ ++  ..++|+|++|++++
T Consensus       142 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~  221 (312)
T d2b69a1         142 ACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNG  221 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHH
Confidence            8899999999999999999999999999999999998765433 34567888888877653 43  48999999999999


Q ss_pred             HHHhhcccccCceEEEe-cCCcCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCcccchhHHHH-hCCCccc-cCCC
Q 039049          233 HILAMEETRASGRLICS-SSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       233 ~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lg~~~~~-~l~e  305 (305)
                      ++.+++.. .++.||++ +..+++.++++.+.+.++..........+..+.....+|++|+++ ||| +|+ +|+|
T Consensus       222 ~~~~~~~~-~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw-~p~~~l~~  295 (312)
T d2b69a1         222 LVALMNSN-VSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGW-EPVVPLEE  295 (312)
T ss_dssp             HHHHHTSS-CCSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEECCCTTCCCCCCBCCHHHHHHHCC-CCCSCHHH
T ss_pred             HHHHHhhc-cCCceEecCCcccchhhHHHHHHHHhCCCCceEECCCCCCCCCeeeECHHHHHHHHCC-CCCCCHHH
Confidence            99988765 46679985 789999999999999997543223334455566778899999999 999 998 8753

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=3.1e-45  Score=315.17  Aligned_cols=293  Identities=17%  Similarity=0.197  Sum_probs=229.3

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCccc-chhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLS-KVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFH   79 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~   79 (305)
                      ||+|||||||||||++|+++|+++|++|.+++++..... ....+..  ....+++++.+|+.|.+.+..++.+++.|+|
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~--~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~   79 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEA--ILGDRVELVVGDIADAELVDKLAAKADAIVH   79 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGG--GCSSSEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHH--hhcCCeEEEEccCCCHHHHHHHHhhhhhhhh
Confidence            899999999999999999999999998887777532211 1111111  1245899999999999999999999999999


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCC--------CCCcccCCCCCCCccc
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDA--------QQVSPLNESHWSDPDY  151 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~--------~~~~~~~E~~~~~~~~  151 (305)
                      +|+......+..++...+++|+.++.++++++... + .++|++||.++|+..+..        ......+|+++..|. 
T Consensus        80 ~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~-~-~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~-  156 (346)
T d1oc2a_          80 YAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-D-IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPS-  156 (346)
T ss_dssp             CCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-T-CEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCC-
T ss_pred             hhhcccccchhhCcccceeeehHhHHhhhhhhccc-c-ccccccccceEecccCccccccccccCcccccccCCCCCCC-
Confidence            99987765444556778999999999999999988 6 589999999988753221        112345666666666 


Q ss_pred             ccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCC-CC--CCCccceeHHH
Q 039049          152 CKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGE-YP--NTTVGFVHIDD  228 (305)
Q Consensus       152 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~i~v~D  228 (305)
                           +.|+.+|.++|.+++.+++.++++++++||+++|||+.... .....++.....+.+.. ++  ...++|+|++|
T Consensus       157 -----s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~-~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D  230 (346)
T d1oc2a_         157 -----SPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE-KFIPRQITNILAGIKPKLYGEGKNVRDWIHTND  230 (346)
T ss_dssp             -----SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT-SHHHHHHHHHHHTCCCEEETTSCCEEECEEHHH
T ss_pred             -----CHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCcc-chhHHHHHHHHcCCceeEeCCCCccccccchhh
Confidence                 88999999999999999999999999999999999975433 34455666666776654 33  44899999999


Q ss_pred             HHHHHHHhhcccccCceEEE-ecCCcCHHHHHHHHHHhCCCCCCC-CCCCCCCCCCCCcccchhHHHH-hCCCccc--cC
Q 039049          229 VVGAHILAMEETRASGRLIC-SSSVAHWSPIIEMLKATYPSYPYE-SKCSKQEGDNSPHSMDTSKLFE-LGFVGFK--SV  303 (305)
Q Consensus       229 ~a~~~~~~~~~~~~~~~~~~-~~~~~s~~el~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-lg~~~~~--~l  303 (305)
                      +|++++.+++++..++.||+ +++..++.++++.+.+.++..... .....++.....+.+|++|+++ ||| +|+  +|
T Consensus       231 ~a~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~LGw-~P~~t~l  309 (346)
T d1oc2a_         231 HSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDASKLRDELGW-TPQFTDF  309 (346)
T ss_dssp             HHHHHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCCTTCCCBCCBCCHHHHHHHCC-CCSCCCH
T ss_pred             HHHHHHHHHhhcccCccccccccccccchHHHHHHHHHhCCCCcceEECCCCCCCCceeeeCHHHHHHHHCC-CCcCCCH
Confidence            99999999999888888887 577999999999999999764322 2222344555667789999999 999 986  46


Q ss_pred             CC
Q 039049          304 PQ  305 (305)
Q Consensus       304 ~e  305 (305)
                      +|
T Consensus       310 ~e  311 (346)
T d1oc2a_         310 SE  311 (346)
T ss_dssp             HH
T ss_pred             HH
Confidence            53

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=4.2e-45  Score=313.78  Aligned_cols=293  Identities=22%  Similarity=0.195  Sum_probs=234.2

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCccc-chhhhhhc--cCccCceEEEEccCCCcchHHHHhcCCCEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLS-KVGFLWEL--NGAEERLKIMKADLLMEGSFDEAIQGVDGV   77 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~~~d~V   77 (305)
                      +|+|||||||||||++|+++|++.|++|++++|...... ....+...  .....++.++.+|+.|...+.......+.|
T Consensus        16 ~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~~v   95 (341)
T d1sb8a_          16 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDYV   95 (341)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccccccccc
Confidence            368999999999999999999999999999987443211 11111111  111347899999999999888888899999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccch
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNL  157 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  157 (305)
                      +|+++......+..++...+++|+.++.+++++|.+. ++++|||+||+++|+....    .|.+|+++..|.      +
T Consensus        96 ~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~-~~~~~i~~SS~~vyg~~~~----~~~~E~~~~~p~------~  164 (341)
T d1sb8a_          96 LHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-KVQSFTYAASSSTYGDHPG----LPKVEDTIGKPL------S  164 (341)
T ss_dssp             EECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGGTTCCC----SSBCTTCCCCCC------S
T ss_pred             ccccccccccccccCccchhheeehhHHHHHHHHHhc-CCceEEEcccceeeCCCCC----CCccCCCCCCCC------C
Confidence            9999877654456667778999999999999999999 8999999999999876432    689999999887      8


Q ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC---chHHHHHHHHhcCCCCC-CC--CCccceeHHHHHH
Q 039049          158 WYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPT---STLLLILAMVKGLRGEY-PN--TTVGFVHIDDVVG  231 (305)
Q Consensus       158 ~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~---~~~~~~~~~~~~~~~~~-~~--~~~~~i~v~D~a~  231 (305)
                      .|+.+|.++|++++.+.+.++++++++||+++||++..+...   ....++..+..|+++.+ ++  ..++|+|++|+|.
T Consensus       165 ~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~  244 (341)
T d1sb8a_         165 PYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQ  244 (341)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccch
Confidence            899999999999999999999999999999999998765432   33466788888877653 44  4899999999999


Q ss_pred             HHHHhhcccc--cCceEEEe-cCCcCHHHHHHHHHHhCCCCCCCC-----CCCCCCCCCCCcccchhHHHH-hCCCccc-
Q 039049          232 AHILAMEETR--ASGRLICS-SSVAHWSPIIEMLKATYPSYPYES-----KCSKQEGDNSPHSMDTSKLFE-LGFVGFK-  301 (305)
Q Consensus       232 ~~~~~~~~~~--~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-lg~~~~~-  301 (305)
                      ++..++....  .++.||++ ++.+|+.|+++.+.+.++...++.     ....+..+.....+|++|+++ ||| +|+ 
T Consensus       245 a~~~~~~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~LGw-~p~~  323 (341)
T d1sb8a_         245 ANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAAKLLGY-APKY  323 (341)
T ss_dssp             HHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEECCCTTCCSBCCBCCHHHHHHTCC-CCCC
T ss_pred             hhhhhhhccccccceeeeecccccchHHHHHHHHHHHhccccccccccccccCCCCCCcCeeeeCHHHHHHHHCC-CcCC
Confidence            9999987654  35579885 678999999999999885432221     112245556667889999999 999 998 


Q ss_pred             cCCC
Q 039049          302 SVPQ  305 (305)
Q Consensus       302 ~l~e  305 (305)
                      +|+|
T Consensus       324 sl~~  327 (341)
T d1sb8a_         324 DVSA  327 (341)
T ss_dssp             CHHH
T ss_pred             CHHH
Confidence            7754

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.3e-44  Score=307.00  Aligned_cols=290  Identities=19%  Similarity=0.198  Sum_probs=216.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccc-hhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSK-VGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi   78 (305)
                      ||||||||+||||++|++.|+++|++|++++|....... .......  ...+++++++|+.|.+.+.++++  ++|+||
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vi   78 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERL--GGKHPTFVEGDIRNEALMTEILHDHAIDTVI   78 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHH--HTSCCEEEECCTTCHHHHHHHHHHTTCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhh--cCCCCEEEEeecCCHHHHHHHHhccCCCEEE
Confidence            569999999999999999999999999999874332211 1111111  13479999999999999999987  799999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCC-CCCcccccccch
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH-WSDPDYCKHYNL  157 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~-~~~~~~~~~~~~  157 (305)
                      |+||......+..++...+++|+.++.+++++|++. ++++||++||.++|+....    .+..|.+ ...|.      +
T Consensus        79 HlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~-~v~~~i~~Ss~~vy~~~~~----~~~~e~~~~~~p~------~  147 (338)
T d1udca_          79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNFIFSSSATVYGDQPK----IPYVESFPTGTPQ------S  147 (338)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCSCCS----SSBCTTSCCCCCS------S
T ss_pred             ECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHh-CCCEEEecCcceEEccccc----cccccccccCCCc------c
Confidence            999987654444566779999999999999999999 9999999999998876543    3344443 33444      7


Q ss_pred             hHHHHHHHHHHHHHHHHHH-cCCcEEEEecCceecCCCCCCC--------CchHH-HHHHHHhcCC-CC-------C--C
Q 039049          158 WYAYAKTIAEKEAWRIAKD-CGIDMVVVNPSFVVGPLLAPQP--------TSTLL-LILAMVKGLR-GE-------Y--P  217 (305)
Q Consensus       158 ~Y~~sK~~~E~~~~~~~~~-~~~~~~i~Rp~~v~G~~~~~~~--------~~~~~-~~~~~~~~~~-~~-------~--~  217 (305)
                      .|+.+|..+|.++..+... .+++++++||+++||+......        ..... ++.....+.. +.       .  +
T Consensus       148 ~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g  227 (338)
T d1udca_         148 PYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDG  227 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTS
T ss_pred             hHHHHHhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCC
Confidence            8999999999999876655 4899999999999998654221        12222 3333333222 11       1  2


Q ss_pred             CCCccceeHHHHHHHHHHhhccccc---CceEEEe-cCCcCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCcccchhHHH
Q 039049          218 NTTVGFVHIDDVVGAHILAMEETRA---SGRLICS-SSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLF  293 (305)
Q Consensus       218 ~~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (305)
                      ...|||+|++|++.++..+......   ++.||++ ++.+|+.|+++.+.+.+|..........++.....+.+|++|++
T Consensus       228 ~~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~  307 (338)
T d1udca_         228 TGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYWADASKAD  307 (338)
T ss_dssp             SCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTSCCCEEEECCCTTCCSBCCBCCHHHH
T ss_pred             CceeeEEEEeehhhhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCCCCceEECCCCCCCCCEeeECHHHHH
Confidence            3379999999999988887664433   3469996 57899999999999999753222223334555667889999999


Q ss_pred             H-hCCCccc-cCCC
Q 039049          294 E-LGFVGFK-SVPQ  305 (305)
Q Consensus       294 ~-lg~~~~~-~l~e  305 (305)
                      + ||| +|+ +|+|
T Consensus       308 ~~lgw-kp~~~l~e  320 (338)
T d1udca_         308 RELNW-RVTRTLDE  320 (338)
T ss_dssp             HHHCC-CCCCCHHH
T ss_pred             HHHCC-CcCCCHHH
Confidence            9 999 998 8764

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.1e-43  Score=305.70  Aligned_cols=286  Identities=16%  Similarity=0.135  Sum_probs=218.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      |||||||||||||++|+++|+++||+|++++|........        .....++..+|+.+.+.+.++++++|+|||+|
T Consensus        16 MKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a   87 (363)
T d2c5aa1          16 LKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE--------DMFCDEFHLVDLRVMENCLKVTEGVDHVFNLA   87 (363)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG--------GGTCSEEEECCTTSHHHHHHHHTTCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhh--------hcccCcEEEeechhHHHHHHHhhcCCeEeecc
Confidence            7899999999999999999999999999998765422111        11256788899999999999999999999999


Q ss_pred             cccccCC-CCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCC---cccCCCCCCCcccccccch
Q 039049           82 SPVLVPY-DNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQV---SPLNESHWSDPDYCKHYNL  157 (305)
Q Consensus        82 ~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~---~~~~E~~~~~~~~~~~~~~  157 (305)
                      +...... ....+......|+.++.+++++|++. ++++|||+||..+|+.....+..   ....|..+..|.      +
T Consensus        88 ~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~-~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~------~  160 (363)
T d2c5aa1          88 ADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN-GIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQ------D  160 (363)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCS------S
T ss_pred             cccccccccccccccccccccchhhHHHHhHHhh-CccccccccccccccccccccccccccccccCCcCCCC------C
Confidence            8776432 24566678899999999999999999 99999999999988865432110   122344444554      8


Q ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCch---HH-HHHHHHhcCC-CCCC--CCCccceeHHHHH
Q 039049          158 WYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTST---LL-LILAMVKGLR-GEYP--NTTVGFVHIDDVV  230 (305)
Q Consensus       158 ~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~---~~-~~~~~~~~~~-~~~~--~~~~~~i~v~D~a  230 (305)
                      .|+.+|.++|++++.+.++++++++++||+++||+.........   .. .......... ..++  ...|+|+|++|++
T Consensus       161 ~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~  240 (363)
T d2c5aa1         161 AFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECV  240 (363)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHH
Confidence            89999999999999999999999999999999999765432211   11 1122222222 2233  3489999999999


Q ss_pred             HHHHHhhcccccCceEEEe-cCCcCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCcccchhHHHH-hCCCccc-cCCC
Q 039049          231 GAHILAMEETRASGRLICS-SSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lg~~~~~-~l~e  305 (305)
                      +++..+++.. .++.||++ +..+|+.|+++.+.+..+.. .+......+.......+|++|+++ ||| +|+ +|+|
T Consensus       241 ~~~~~~~~~~-~~~~~ni~~~~~~s~~~l~~~i~~~~g~~-~~i~~~~~~~~~~~~~~d~ska~~~LGw-~p~~slee  315 (363)
T d2c5aa1         241 EGVLRLTKSD-FREPVNIGSDEMVSMNEMAEMVLSFEEKK-LPIHHIPGPEGVRGRNSDNNLIKEKLGW-APNMRLKE  315 (363)
T ss_dssp             HHHHHHHHSS-CCSCEEECCCCCEEHHHHHHHHHHTTTCC-CCEEEECCCCCCSBCEECCHHHHHHHSC-CCCCCHHH
T ss_pred             HHHHHHHhCC-CCCeEEEecCCcccHHHHHHHHHHHhCCC-CceEeCCCCCCccccccCHHHHHHHhCC-CCCCCHHH
Confidence            9999998764 56789985 78999999999999998753 222223344556677889999999 999 997 8764

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-43  Score=303.79  Aligned_cols=291  Identities=16%  Similarity=0.086  Sum_probs=219.5

Q ss_pred             CcE-EEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCccc--chhhhhh--ccCccCceEEEEccCCCcchHHHHhc--CC
Q 039049            2 PEY-CVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLS--KVGFLWE--LNGAEERLKIMKADLLMEGSFDEAIQ--GV   74 (305)
Q Consensus         2 ~~i-lItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~--~~~~~~~--~~~~~~~~~~~~~D~~d~~~~~~~~~--~~   74 (305)
                      ||| ||||||||||+||+++|+++||+|++++|..+...  ....+..  ......+++++++|+.|.+.+.+++.  ++
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   80 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP   80 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence            688 99999999999999999999999999999764321  1111111  11113478999999999999999986  67


Q ss_pred             CEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCc---cEEEEeccceeeeccCCCCCCcccCCCCCCCccc
Q 039049           75 DGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSV---KRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDY  151 (305)
Q Consensus        75 d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~  151 (305)
                      ++|+|+|+.........+...++++|+.++.+++++|+++ ++   ++|||+||.++|+...    ..+++|+++..|. 
T Consensus        81 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~-~~~~~~~~i~~SS~~vyg~~~----~~~~~E~~~~~P~-  154 (347)
T d1t2aa_          81 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTC-GLINSVKFYQASTSELYGKVQ----EIPQKETTPFYPR-  154 (347)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEEEEEEEGGGTCSCS----SSSBCTTSCCCCC-
T ss_pred             ceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHc-CCCCCcEEEEecchheecCCC----CCCCCCCCCCCCC-
Confidence            8999999987654445566667899999999999999987 44   4899999999987532    3689999998887 


Q ss_pred             ccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCc--hH-HHHHHHHhcCCCC-CCC--CCcccee
Q 039049          152 CKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTS--TL-LLILAMVKGLRGE-YPN--TTVGFVH  225 (305)
Q Consensus       152 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~--~~-~~~~~~~~~~~~~-~~~--~~~~~i~  225 (305)
                           ++|+.||.++|++++.+.+.++++++++||+++|||........  .. .++.....+.+.. +++  ..++|+|
T Consensus       155 -----~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~  229 (347)
T d1t2aa_         155 -----SPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGH  229 (347)
T ss_dssp             -----SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEE
T ss_pred             -----CHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeE
Confidence                 88999999999999999999999999999999999975443211  11 2233333333332 333  3899999


Q ss_pred             HHHHHHHHHHhhcccccCceEEE-ecCCcCHHHHHHHHHHhCCCCCCCCCC---------------------CCCCCCCC
Q 039049          226 IDDVVGAHILAMEETRASGRLIC-SSSVAHWSPIIEMLKATYPSYPYESKC---------------------SKQEGDNS  283 (305)
Q Consensus       226 v~D~a~~~~~~~~~~~~~~~~~~-~~~~~s~~el~~~i~~~~~~~~~~~~~---------------------~~~~~~~~  283 (305)
                      ++|+++++..++++... +.|++ .+...++.++.+.+...++........                     ..++....
T Consensus       230 v~D~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~  308 (347)
T d1t2aa_         230 AKDYVEAMWLMLQNDEP-EDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVD  308 (347)
T ss_dssp             HHHHHHHHHHHHHSSSC-CCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCC
T ss_pred             ecHHHHHHHHHhhcCCC-ccceeccccccccchhhhhhhhhhcceeeecccchhhhhhhhhcCCceeeecccCCCCCCcC
Confidence            99999999999998654 45665 577899999999998888642110000                     01334455


Q ss_pred             CcccchhHHHH-hCCCccc-cCCC
Q 039049          284 PHSMDTSKLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       284 ~~~~~~~~~~~-lg~~~~~-~l~e  305 (305)
                      .+.+|++|+++ ||| +|+ +|+|
T Consensus       309 ~~~~d~skak~~Lgw-~P~~sl~e  331 (347)
T d1t2aa_         309 FLQGDCTKAKQKLNW-KPRVAFDE  331 (347)
T ss_dssp             BCCBCCHHHHHHHCC-CCCSCHHH
T ss_pred             EeeECHHHHHHHHCC-CcCCCHHH
Confidence            67889999999 999 998 8764

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=4.1e-43  Score=298.88  Aligned_cols=290  Identities=17%  Similarity=0.085  Sum_probs=223.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi~   79 (305)
                      |+|||||||||||++|+++|+++||+|++++|....... ..+.... ..++++++++|+.|.+.+.+.+.  ..++++|
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~-~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~   78 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR-WRLRELG-IEGDIQYEDGDMADACSVQRAVIKAQPQEVYN   78 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC-HHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccH-HHHHHhc-ccCCcEEEEccccChHHhhhhhcccccccccc
Confidence            689999999999999999999999999999997653221 2222221 23479999999999999998876  5688999


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhH
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWY  159 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y  159 (305)
                      +|+..........+...++.|+.++.+++++|++.+..++|++.||..+|+...    ..+.+|+++..|.      +.|
T Consensus        79 ~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~----~~~~~E~~~~~p~------~~Y  148 (321)
T d1rpna_          79 LAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQ----AERQDENTPFYPR------SPY  148 (321)
T ss_dssp             CCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCS----SSSBCTTSCCCCC------SHH
T ss_pred             ccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCccc----CCCCCCCCCcccc------Chh
Confidence            988776554555667789999999999999999983344777877777554432    2567899988887      889


Q ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC--chHHHHHHHHhcCCCC--CCC--CCccceeHHHHHHHH
Q 039049          160 AYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPT--STLLLILAMVKGLRGE--YPN--TTVGFVHIDDVVGAH  233 (305)
Q Consensus       160 ~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~--~~~--~~~~~i~v~D~a~~~  233 (305)
                      +.+|.++|.+++.+.+.++++++++||+++|||.......  .....+.+...+....  +++  +.|+|+|++|+|+++
T Consensus       149 ~~sK~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~  228 (321)
T d1rpna_         149 GVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAM  228 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHH
Confidence            9999999999999999999999999999999997544321  2234455555554332  344  489999999999999


Q ss_pred             HHhhcccccCceEEE-ecCCcCHHHHHHHHHHhCCCCC--CCC-C-CCCCCCCCCCcccchhHHHH-hCCCccc-cCCC
Q 039049          234 ILAMEETRASGRLIC-SSSVAHWSPIIEMLKATYPSYP--YES-K-CSKQEGDNSPHSMDTSKLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       234 ~~~~~~~~~~~~~~~-~~~~~s~~el~~~i~~~~~~~~--~~~-~-~~~~~~~~~~~~~~~~~~~~-lg~~~~~-~l~e  305 (305)
                      ..+++++. .+.||+ +++..|+.++++.+.+..+...  ... . ...++.+...+..|++|+++ ||| +|+ +|+|
T Consensus       229 ~~~~~~~~-~~~~ni~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~~~~~d~~k~~k~lG~-~P~~~l~e  305 (321)
T d1rpna_         229 WLMLQQDK-ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLGW-KPRTSLDE  305 (321)
T ss_dssp             HHHHHSSS-CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGCCSSCCCBCCBCTHHHHHHHCC-CCCSCHHH
T ss_pred             HHHHhcCC-cCCceecccccceehhhhHHHHHHhCCCccceeecCCCCCCCCccCCccCCHHHHHHHHCC-CcCCCHHH
Confidence            99998865 466887 4789999999999999986421  111 1 11244556678889999999 999 998 8764

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.5e-42  Score=298.45  Aligned_cols=294  Identities=16%  Similarity=0.163  Sum_probs=220.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcc-cchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDL-SKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi   78 (305)
                      |.|||||||||||+||+++|+++|++|+++++..... .........  ...+++++++|+.|.+.+.+++.  ++|+||
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~--~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi   79 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVL--TKHHIPFYEVDLCDRKGLEKVFKEYKIDSVI   79 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHH--HTSCCCEEECCTTCHHHHHHHHHHSCCCEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhh--cccCCeEEEeecCCHHHHHHHHhccCCCEEE
Confidence            6799999999999999999999999999997643221 111111111  13478999999999999999886  799999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchh
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLW  158 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  158 (305)
                      |+||..........+..+..+|+.++.+++++|++. ++++||++||..+|+.........+++|+.+..|.      +.
T Consensus        80 hlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~-~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~------~~  152 (347)
T d1z45a2          80 HFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-NVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPT------NP  152 (347)
T ss_dssp             ECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCC------SH
T ss_pred             EccccccccccccCcccccccchhhhHHHHHHHHhc-ccceEEeecceeeecCcccCCCCCccccccCCCCC------Ch
Confidence            999987655455566778999999999999999999 99999999999999876544445678888888877      88


Q ss_pred             HHHHHHHHHHHHHHHHHH--cCCcEEEEecCceecCCCCCC--------CCchHHHHHHHHhc--CCCC-CCC-------
Q 039049          159 YAYAKTIAEKEAWRIAKD--CGIDMVVVNPSFVVGPLLAPQ--------PTSTLLLILAMVKG--LRGE-YPN-------  218 (305)
Q Consensus       159 Y~~sK~~~E~~~~~~~~~--~~~~~~i~Rp~~v~G~~~~~~--------~~~~~~~~~~~~~~--~~~~-~~~-------  218 (305)
                      |+.+|.++|++++.+.+.  .+++++++||+++||+.....        .......+.....+  .++. +++       
T Consensus       153 Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~  232 (347)
T d1z45a2         153 YGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDG  232 (347)
T ss_dssp             HHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCS
T ss_pred             hHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCC
Confidence            999999999999998764  489999999999999854321        11233333333333  2222 222       


Q ss_pred             -CCccceeHHHHHHHHHHhhcccc-------cCceEEEe-cCCcCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCcccch
Q 039049          219 -TTVGFVHIDDVVGAHILAMEETR-------ASGRLICS-SSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDT  289 (305)
Q Consensus       219 -~~~~~i~v~D~a~~~~~~~~~~~-------~~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (305)
                       ..+|++++.|++.+++.+++...       ..+.||++ ++++|+.|+++.+.+.+|..........++.+...+.+|+
T Consensus       233 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~  312 (347)
T d1z45a2         233 TPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGRRAGDVLNLTAKP  312 (347)
T ss_dssp             SCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC---------CCCCCBCC
T ss_pred             ceeeeeeeeecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCCCCceEeCCCCCCCCCEeeECH
Confidence             26789999999999988876422       23469995 7899999999999999975322223334556667788999


Q ss_pred             hHHHH-hCCCccc-cCCC
Q 039049          290 SKLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       290 ~~~~~-lg~~~~~-~l~e  305 (305)
                      +|+++ ||| +|+ +|+|
T Consensus       313 sk~~~~lGw-~p~~~lee  329 (347)
T d1z45a2         313 DRAKRELKW-QTELQVED  329 (347)
T ss_dssp             HHHHHHTCC-CCCCCHHH
T ss_pred             HHHHHHHCC-CCCCCHHH
Confidence            99999 999 987 8764

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.5e-42  Score=293.92  Aligned_cols=290  Identities=17%  Similarity=0.208  Sum_probs=215.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC-CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHH-HhcCCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG-HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDE-AIQGVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~d~Vi~   79 (305)
                      |||||||||||||++|+++|+++| ++|+++++........       ...++++++++|+++.+.+.+ +++++|+|||
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~-------~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih   73 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF-------LNHPHFHFVEGDISIHSEWIEYHVKKCDVVLP   73 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGG-------TTCTTEEEEECCTTTCSHHHHHHHHHCSEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhh-------ccCCCeEEEECccCChHHHHHHHHhCCCcccc
Confidence            579999999999999999999999 5899998765422211       113589999999998776655 6678999999


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCccccc-ccchh
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCK-HYNLW  158 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~-~~~~~  158 (305)
                      +|+..........+...+++|+.++.+++++|.+. ++ ++++.||+.+|+....    ....|.....+..+. .+.+.
T Consensus        74 ~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~-~~-~~~~~ss~~~~~~~~~----~~~~~~~~~~~~~~~~~p~~~  147 (342)
T d2blla1          74 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-RK-RIIFPSTSEVYGMCSD----KYFDEDHSNLIVGPVNKPRWI  147 (342)
T ss_dssp             CBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-TC-EEEEECCGGGGBTCCC----SSBCTTTCCCBCCCTTCGGGH
T ss_pred             ccccccccccccCCccccccccccccccccccccc-cc-cccccccccccccccc----cccccccccccccccCCCcch
Confidence            99987765455566678999999999999999988 65 5678899888886543    233333322221111 12277


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCC-------CchHHHHHHHHhcCCCCC-C--CCCccceeHHH
Q 039049          159 YAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQP-------TSTLLLILAMVKGLRGEY-P--NTTVGFVHIDD  228 (305)
Q Consensus       159 Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~-------~~~~~~~~~~~~~~~~~~-~--~~~~~~i~v~D  228 (305)
                      |+.||.++|++++.+++.++++++++||+.+||+......       .....++..++.|+++.+ +  ...++|+|++|
T Consensus       148 Y~~sK~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D  227 (342)
T d2blla1         148 YSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRD  227 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHH
T ss_pred             hhhcccchhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeeccccc
Confidence            9999999999999999999999999999999999654322       123567778888877653 3  44899999999


Q ss_pred             HHHHHHHhhccccc---CceEEEe-cC-CcCHHHHHHHHHHhCCCCCCCCC----C-----------CCCCCCCCCcccc
Q 039049          229 VVGAHILAMEETRA---SGRLICS-SS-VAHWSPIIEMLKATYPSYPYESK----C-----------SKQEGDNSPHSMD  288 (305)
Q Consensus       229 ~a~~~~~~~~~~~~---~~~~~~~-~~-~~s~~el~~~i~~~~~~~~~~~~----~-----------~~~~~~~~~~~~~  288 (305)
                      +|+++..+++++..   ++.||++ ++ .+|+.|+++.+.+.++.......    .           .....+......|
T Consensus       228 ~~~a~~~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  307 (342)
T d2blla1         228 GIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPS  307 (342)
T ss_dssp             HHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------CCCCCBC
T ss_pred             ccceeeeehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccccccCcccccceeccccccccccccccccccC
Confidence            99999999987543   4579995 54 58999999999998753211111    0           1122233456779


Q ss_pred             hhHHHH-hCCCccc-cCCC
Q 039049          289 TSKLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       289 ~~~~~~-lg~~~~~-~l~e  305 (305)
                      ++|+++ ||| +|+ +|+|
T Consensus       308 ~~k~~~~lgw-~P~~slee  325 (342)
T d2blla1         308 IRNAHRCLDW-EPKIDMQE  325 (342)
T ss_dssp             CHHHHHHHCC-CCCCCHHH
T ss_pred             HHHHHHHHCC-CcCCCHHH
Confidence            999999 999 998 8764

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=100.00  E-value=1.3e-41  Score=296.43  Aligned_cols=296  Identities=20%  Similarity=0.215  Sum_probs=220.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHH-cCCeEEEEEe---CCCc------ccch-hhhhh-----ccCccCceEEEEccCCCcc
Q 039049            2 PEYCVTGGTGFIAAHLVKALLD-KGHMVRTTVR---DPED------LSKV-GFLWE-----LNGAEERLKIMKADLLMEG   65 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~-~g~~V~~~~r---~~~~------~~~~-~~~~~-----~~~~~~~~~~~~~D~~d~~   65 (305)
                      ||||||||+||||+||+++|++ .|++|+++++   +...      .... ..+..     ......++.++.+|+.|.+
T Consensus         3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~   82 (383)
T d1gy8a_           3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (383)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHH
Confidence            6899999999999999999986 6899999974   1110      0000 00110     1112346889999999999


Q ss_pred             hHHHHhc---CCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCC---CCCc
Q 039049           66 SFDEAIQ---GVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDA---QQVS  139 (305)
Q Consensus        66 ~~~~~~~---~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~---~~~~  139 (305)
                      .+.++++   ++|+|||+|+..........+...++.|+.++.++++++++. ++++++++||..+|+.....   ....
T Consensus        83 ~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~  161 (383)
T d1gy8a_          83 FLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-KCDKIIFSSSAAIFGNPTMGSVSTNAE  161 (383)
T ss_dssp             HHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred             Hhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhcc-CCccccccccccccccccccccccccc
Confidence            9999885   679999999987765455566778899999999999999999 99999999999887754322   1124


Q ss_pred             ccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC--------chHHHHHHHHhc
Q 039049          140 PLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPT--------STLLLILAMVKG  211 (305)
Q Consensus       140 ~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~--------~~~~~~~~~~~~  211 (305)
                      ++.|+++..|.      +.|+.+|..+|++++.+.+.++++++++||+++|||.......        ..+.++.++..+
T Consensus       162 ~~~e~~~~~p~------~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~  235 (383)
T d1gy8a_         162 PIDINAKKSPE------SPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSD  235 (383)
T ss_dssp             CBCTTSCCBCS------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHH
T ss_pred             ccccccCCCCC------CHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhh
Confidence            67777777776      8899999999999999999999999999999999998765432        112233332211


Q ss_pred             ----------------CCC-------CC--CCCCccceeHHHHHHHHHHhhcccc---------cCceEEE-ecCCcCHH
Q 039049          212 ----------------LRG-------EY--PNTTVGFVHIDDVVGAHILAMEETR---------ASGRLIC-SSSVAHWS  256 (305)
Q Consensus       212 ----------------~~~-------~~--~~~~~~~i~v~D~a~~~~~~~~~~~---------~~~~~~~-~~~~~s~~  256 (305)
                                      .++       ..  +.+.|||+|++|+|++++.+++...         ..++||+ +++.+|+.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~  315 (383)
T d1gy8a_         236 IAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVR  315 (383)
T ss_dssp             HSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHH
T ss_pred             ccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHH
Confidence                            110       11  2336899999999999999987522         2346999 47899999


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCCCCCCCCcccchhHHHH-hCCCccc-cCCC
Q 039049          257 PIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       257 el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lg~~~~~-~l~e  305 (305)
                      |+++.+.+.+|..........++.+...+..|++|+++ ||| +|+ +|+|
T Consensus       316 el~~~i~~~~~~~~~~~~~~~~~~d~~~~~~d~~k~~k~LGw-~P~~~l~e  365 (383)
T d1gy8a_         316 EVIEVARKTTGHPIPVRECGRREGDPAYLVAASDKAREVLGW-KPKYDTLE  365 (383)
T ss_dssp             HHHHHHHHHHCCCCCEEEECCCTTCCSEECBCCHHHHHHTCC-CCSCCSHH
T ss_pred             HHHHHHHHHhCCCCceEECCCCCCCcCEeeeCHHHHHHHHCC-ccCCCHHH
Confidence            99999999987532222333355566778889999999 999 998 8864

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=5.1e-42  Score=294.18  Aligned_cols=292  Identities=17%  Similarity=0.112  Sum_probs=220.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCc--ccchhhhhhcc--CccCceEEEEccCCCcchHHHHhc--CCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPED--LSKVGFLWELN--GAEERLKIMKADLLMEGSFDEAIQ--GVD   75 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~--~~~~~~~~~~~--~~~~~~~~~~~D~~d~~~~~~~~~--~~d   75 (305)
                      |++||||||||||+||+++|+++||+|++++|..+.  ......+....  .....++++.+|+.+.+.+.+.++  ++|
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~D   81 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD   81 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhccc
Confidence            789999999999999999999999999999996542  11111111111  113468899999999999999886  789


Q ss_pred             EEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcC----CccEEEEeccceeeeccCCCCCCcccCCCCCCCccc
Q 039049           76 GVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAK----SVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDY  151 (305)
Q Consensus        76 ~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~  151 (305)
                      +|||+|+........+.+...+..|+.++.+++++++...    ...++++.||+.+++..     ..+.+|+++..|. 
T Consensus        82 ~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~-----~~~~~E~~~~~p~-  155 (339)
T d1n7ha_          82 EVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGST-----PPPQSETTPFHPR-  155 (339)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTS-----CSSBCTTSCCCCC-
T ss_pred             hhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccC-----CCCCCCCCCCCCc-
Confidence            9999999877554455667789999999999999987641    33467888877654432     2578999998887 


Q ss_pred             ccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCc--hHHHHHHHHhcCCCC--CCC--CCcccee
Q 039049          152 CKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTS--TLLLILAMVKGLRGE--YPN--TTVGFVH  225 (305)
Q Consensus       152 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~--~~~--~~~~~i~  225 (305)
                           +.|+.+|.++|.++..+.+.++++++++||+++|||........  ....+.....+....  .++  ..|+|+|
T Consensus       156 -----~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~  230 (339)
T d1n7ha_         156 -----SPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGF  230 (339)
T ss_dssp             -----SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEE
T ss_pred             -----chhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCcccccee
Confidence                 88999999999999999999999999999999999975543211  122233333333322  333  3899999


Q ss_pred             HHHHHHHHHHhhcccccCceEEEecCCcCHHHHHHHHHHhCCCCCC--C--CCCCCCCCCCCCcccchhHHHH-hCCCcc
Q 039049          226 IDDVVGAHILAMEETRASGRLICSSSVAHWSPIIEMLKATYPSYPY--E--SKCSKQEGDNSPHSMDTSKLFE-LGFVGF  300 (305)
Q Consensus       226 v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~-lg~~~~  300 (305)
                      ++|+|+++..+++++...+.++..+...+..++++.+.+.++....  +  .....++.....+..|++|+++ ||| +|
T Consensus       231 v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~d~~Kak~~LGw-~P  309 (339)
T d1n7ha_         231 AGDYVEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGDASKAKEVLGW-KP  309 (339)
T ss_dssp             HHHHHHHHHHHHTSSSCCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGGSCSSCCCBCCBCCHHHHHHHCC-CC
T ss_pred             eehHHHHHHHHHhcCCCCccccccccccccchhhhhhhhhhhcccCceeeeccCCCCCCCCCeeeECHHHHHHHHCC-Cc
Confidence            9999999999999987666666678889999999999999975211  1  1112245556677889999999 999 99


Q ss_pred             c-cCCC
Q 039049          301 K-SVPQ  305 (305)
Q Consensus       301 ~-~l~e  305 (305)
                      + +|+|
T Consensus       310 ~~~le~  315 (339)
T d1n7ha_         310 QVGFEK  315 (339)
T ss_dssp             CSCHHH
T ss_pred             CCCHHH
Confidence            8 8764

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-41  Score=292.94  Aligned_cols=292  Identities=16%  Similarity=0.162  Sum_probs=215.8

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCC------cc-cchhhhhhccCccCceEEEEccCCCcchHHHHhc-
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPE------DL-SKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-   72 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~------~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-   72 (305)
                      -|||||||||||||++|+++|+++|++|++++|...      .. .....+...  ...++.++++|++|.+.+.+++. 
T Consensus         2 ~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~l~~~~~~   79 (346)
T d1ek6a_           2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL--TGRSVEFEEMDILDQGALQRLFKK   79 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH--HTCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHh--cCCCcEEEEeeccccccccccccc
Confidence            157999999999999999999999999999975221      11 111111111  23479999999999999999876 


Q ss_pred             -CCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCccc
Q 039049           73 -GVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDY  151 (305)
Q Consensus        73 -~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~  151 (305)
                       ++++|+|+||......+...+...+++|+.++.++++++++. ++++|||+||..+|+.....   ....+.....+. 
T Consensus        80 ~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~-~v~~~i~~ss~~~~~~~~~~---~~~~~~~~~~~~-  154 (346)
T d1ek6a_          80 YSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-GVKNLVFSSSATVYGNPQYL---PLDEAHPTGGCT-  154 (346)
T ss_dssp             CCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGGCSCSSS---SBCTTSCCCCCS-
T ss_pred             cccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhc-Ccccccccccceeeeccccc---cccccccccccC-
Confidence             567899999987755455566778999999999999999999 99999999999988875432   223333333444 


Q ss_pred             ccccchhHHHHHHHHHHHHHHHHHH-cCCcEEEEecCceecCCCCCC--------CCchHH-HHHHHHhcC-CC------
Q 039049          152 CKHYNLWYAYAKTIAEKEAWRIAKD-CGIDMVVVNPSFVVGPLLAPQ--------PTSTLL-LILAMVKGL-RG------  214 (305)
Q Consensus       152 ~~~~~~~Y~~sK~~~E~~~~~~~~~-~~~~~~i~Rp~~v~G~~~~~~--------~~~~~~-~~~~~~~~~-~~------  214 (305)
                           ++|+.+|..+|+.+..+.+. .+++.+++||+++||+.....        ...... ++....... ++      
T Consensus       155 -----~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~  229 (346)
T d1ek6a_         155 -----NPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGND  229 (346)
T ss_dssp             -----SHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSC
T ss_pred             -----ChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCc
Confidence                 78999999999999988765 489999999999999865321        112222 333333222 11      


Q ss_pred             -CC--CCCCccceeHHHHHHHHHHhhccccc---CceEEEe-cCCcCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCccc
Q 039049          215 -EY--PNTTVGFVHIDDVVGAHILAMEETRA---SGRLICS-SSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSM  287 (305)
Q Consensus       215 -~~--~~~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  287 (305)
                       ..  +.+.|||+|++|+|.++..+++....   +++||++ +..+|+.|+++.+.+.++..........++.+.....+
T Consensus       230 ~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~~~~~~~~~~~e~~~~~~  309 (346)
T d1ek6a_         230 YDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDVAACYA  309 (346)
T ss_dssp             SSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEECCCTTCCSEECB
T ss_pred             ccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCCCCCeEECCCCCCCCCEeeE
Confidence             11  33378999999999999888665433   4479985 67899999999999999753222223345566677889


Q ss_pred             chhHHHH-hCCCccc-cCCC
Q 039049          288 DTSKLFE-LGFVGFK-SVPQ  305 (305)
Q Consensus       288 ~~~~~~~-lg~~~~~-~l~e  305 (305)
                      |++|+++ ||| +|+ +|+|
T Consensus       310 d~~k~~~~lgw-~p~~slee  328 (346)
T d1ek6a_         310 NPSLAQEELGW-TAALGLDR  328 (346)
T ss_dssp             CCHHHHHTTCC-CCCCCHHH
T ss_pred             CHHHHHHHHCC-CcCCCHHH
Confidence            9999999 999 998 8864

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=100.00  E-value=3.9e-41  Score=288.93  Aligned_cols=294  Identities=27%  Similarity=0.364  Sum_probs=217.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      |+||||||+||||++|+++|+++|++|++++|+..+...................+.+|+.|.+.+.+++.++|+|+|+|
T Consensus        12 k~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~~~a   91 (342)
T d1y1pa1          12 SLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAHIA   91 (342)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhhhhc
Confidence            78999999999999999999999999999999865443333222222223345567799999999999999999999999


Q ss_pred             cccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCC----------------CC
Q 039049           82 SPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNE----------------SH  145 (305)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E----------------~~  145 (305)
                      +....   .......++.|+.++.+++++|.+.+++++|||+||+.+++............|                +.
T Consensus        92 ~~~~~---~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~  168 (342)
T d1y1pa1          92 SVVSF---SNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESD  168 (342)
T ss_dssp             CCCSC---CSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTS
T ss_pred             ccccc---cccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccccccC
Confidence            98763   344556789999999999999998767999999999876554322211122233                33


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEecCceecCCCCCCC--CchHHHHHHHHhcCCCC--CCCC
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC--GIDMVVVNPSFVVGPLLAPQP--TSTLLLILAMVKGLRGE--YPNT  219 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~i~Rp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~  219 (305)
                      +..|.      ++|+.+|..+|.+++.+.+++  +++++++||+.+|||...+..  .....++..+..+....  .+.+
T Consensus       169 ~~~p~------~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~  242 (342)
T d1y1pa1         169 PQKSL------WVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMP  242 (342)
T ss_dssp             TTHHH------HHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCC
T ss_pred             CCCCc------CcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcccCCcc
Confidence            33333      779999999999999998876  477889999999999654433  23455667777766543  2445


Q ss_pred             CccceeHHHHHHHHHHhhcccccCceEEE-ecCCcCHHHHHHHHHHhCCCCCCCCCCCCCC--CCCCCcccchhHHHHhC
Q 039049          220 TVGFVHIDDVVGAHILAMEETRASGRLIC-SSSVAHWSPIIEMLKATYPSYPYESKCSKQE--GDNSPHSMDTSKLFELG  296 (305)
Q Consensus       220 ~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~lg  296 (305)
                      .++|+|++|+|++++.+++++...+.+++ +++.+|+.|+++++.+.+|...++.......  ........+.++++.||
T Consensus       243 ~~~~v~v~Dva~~~i~~l~~~~~~g~~~~~~~~~~t~~eia~~i~k~~p~~~~~~~~~~~~~~~~~~~~~~s~~~~k~lg  322 (342)
T d1y1pa1         243 PQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPDQGQDLSKFDTAPSLEILKSLG  322 (342)
T ss_dssp             SEEEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSCCCCCCCCCCCCCCEECCHHHHHHHHHTT
T ss_pred             ceeeeeHHHHHHHHHHhhcCccccceEEEEcCCceEHHHHHHHHHHHcCCCcCCccCCccCcccccccchHHHHHHHHcC
Confidence            78999999999999999999887777666 5779999999999999997765554433221  11222333445555599


Q ss_pred             CCccc-cCCC
Q 039049          297 FVGFK-SVPQ  305 (305)
Q Consensus       297 ~~~~~-~l~e  305 (305)
                      | .+. +|||
T Consensus       323 ~-~~~~~lee  331 (342)
T d1y1pa1         323 R-PGWRSIEE  331 (342)
T ss_dssp             C-CSCCCHHH
T ss_pred             C-CCCcCHHH
Confidence            9 765 7753

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=9.9e-42  Score=298.14  Aligned_cols=297  Identities=15%  Similarity=0.123  Sum_probs=211.1

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEe-------------CCCcccc-hhhhhhc-cCccCceEEEEccCCCcc
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVR-------------DPEDLSK-VGFLWEL-NGAEERLKIMKADLLMEG   65 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r-------------~~~~~~~-~~~~~~~-~~~~~~~~~~~~D~~d~~   65 (305)
                      .|||||||||||||++|+++|+++||+|++++.             +...... ...+... .....+++++++|+.|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            488999999999999999999999999999851             0000000 0001000 011347899999999999


Q ss_pred             hHHHHhc--CCCEEEEeccccccCC---CCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCC--
Q 039049           66 SFDEAIQ--GVDGVFHTASPVLVPY---DNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQV--  138 (305)
Q Consensus        66 ~~~~~~~--~~d~Vi~~a~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~--  138 (305)
                      .+.++++  ++|+|||+||......   ....+..++++|+.++.+++++|++.+..++|++.||..+|+.......+  
T Consensus        81 ~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~~~  160 (393)
T d1i24a_          81 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGY  160 (393)
T ss_dssp             HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCSSE
T ss_pred             HHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccccccccc
Confidence            9999997  5799999999765432   22345567899999999999999998333467777777665543221110  


Q ss_pred             cccCCC-------CCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCC-------------
Q 039049          139 SPLNES-------HWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQP-------------  198 (305)
Q Consensus       139 ~~~~E~-------~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~-------------  198 (305)
                      ....|+       .+..|.      +.|+.+|+++|.+++.++++++++++++||+++|||......             
T Consensus       161 ~~~~~~~~~~~~~~~~~p~------~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~  234 (393)
T d1i24a_         161 ITITHNGRTDTLPYPKQAS------SFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDA  234 (393)
T ss_dssp             EEEEETTEEEEEECCCCCC------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCST
T ss_pred             ccccccccccccccccccc------cHHHHHhhhhcccccccccccceeeeecccccccCCCcccccccccccccccccc
Confidence            111121       122333      789999999999999999999999999999999999754321             


Q ss_pred             ---CchHHHHHHHHhcCCCCC-CCC--CccceeHHHHHHHHHHhhcccccCceEE---EecCCcCHHHHHHHHHHhCCCC
Q 039049          199 ---TSTLLLILAMVKGLRGEY-PNT--TVGFVHIDDVVGAHILAMEETRASGRLI---CSSSVAHWSPIIEMLKATYPSY  269 (305)
Q Consensus       199 ---~~~~~~~~~~~~~~~~~~-~~~--~~~~i~v~D~a~~~~~~~~~~~~~~~~~---~~~~~~s~~el~~~i~~~~~~~  269 (305)
                         .....++.+...++++.+ +++  .|||+|++|+|+++..++++....+.++   .+++.+|+.||++.+.+..+..
T Consensus       235 ~~~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~~~  314 (393)
T d1i24a_         235 VFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKL  314 (393)
T ss_dssp             TTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHTT
T ss_pred             ccccchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHHHhh
Confidence               123556677777776553 444  8999999999999999999887766543   3456899999999998875322


Q ss_pred             --CCCCC---CCCCCCCCCCcccchhHHHHhCCCccc-cCC
Q 039049          270 --PYESK---CSKQEGDNSPHSMDTSKLFELGFVGFK-SVP  304 (305)
Q Consensus       270 --~~~~~---~~~~~~~~~~~~~~~~~~~~lg~~~~~-~l~  304 (305)
                        .++..   ....+.....+..|++|+++||| +|+ +++
T Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~LGw-~P~~~~~  354 (393)
T d1i24a_         315 GLDVKKMTVPNPRVEAEEHYYNAKHTKLMELGL-EPHYLSD  354 (393)
T ss_dssp             TCCCCEEEECCSSCSCSSCCCCBCCCHHHHTTC-CCCCCCH
T ss_pred             CCCcceeeccCCCCCCCccEecCCHHHHHHcCC-ccccCHH
Confidence              11111   12234455567889999988999 998 664

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.4e-41  Score=286.22  Aligned_cols=275  Identities=17%  Similarity=0.185  Sum_probs=205.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi~   79 (305)
                      |||||||||||||++|+++|+++|+.|+++.+..+                      .|+.+.+.+.+++.  ++|.|+|
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~----------------------~~~~~~~~~~~~~~~~~~d~v~~   60 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE----------------------LNLLDSRAVHDFFASERIDQVYL   60 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT----------------------CCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh----------------------ccccCHHHHHHHHhhcCCCEEEE
Confidence            68999999999999999999999999887643321                      47888888888875  6899999


Q ss_pred             eccccccCC-CCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchh
Q 039049           80 TASPVLVPY-DNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLW  158 (305)
Q Consensus        80 ~a~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  158 (305)
                      +|+...... .......++++|+.++.+++++|++. ++++|||+||.++|++...    .+++|+.+...... .+.++
T Consensus        61 ~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~v~~~i~~SS~~vyg~~~~----~~~~E~~~~~~~~~-~~~~~  134 (315)
T d1e6ua_          61 AAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN-DVNKLLFLGSSCIYPKLAK----QPMAESELLQGTLE-PTNEP  134 (315)
T ss_dssp             CCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGGSCTTCC----SSBCGGGTTSSCCC-GGGHH
T ss_pred             cchhccccccchhhHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEECCceEcCCCCC----CCccCCccccCCCC-CCCCH
Confidence            998765321 23345567889999999999999999 9999999999999986543    46666654432211 11267


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC--ch------HHHHHHHHhcCCCC-CCCC--CccceeHH
Q 039049          159 YAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPT--ST------LLLILAMVKGLRGE-YPNT--TVGFVHID  227 (305)
Q Consensus       159 Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~--~~------~~~~~~~~~~~~~~-~~~~--~~~~i~v~  227 (305)
                      |+.+|.++|++++.++++++++++++||++||||+......  ..      .........+.... .+++  .++|+|++
T Consensus       135 Y~~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~  214 (315)
T d1e6ua_         135 YAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVD  214 (315)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEee
Confidence            99999999999999999999999999999999997654322  11      11223333333322 3333  79999999


Q ss_pred             HHHHHHHHhhccccc---------CceEEE-ecCCcCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCcccchhHHHHhCC
Q 039049          228 DVVGAHILAMEETRA---------SGRLIC-SSSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKLFELGF  297 (305)
Q Consensus       228 D~a~~~~~~~~~~~~---------~~~~~~-~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~  297 (305)
                      |++.++..++++...         ...+++ ++...++.++++.+.+..+..........++.....+.+|++|+++|||
T Consensus       215 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~~d~sk~k~Lg~  294 (315)
T d1e6ua_         215 DMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVTRLHQLGW  294 (315)
T ss_dssp             HHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETTSCCCCSBCCBCCHHHHHTTC
T ss_pred             hhHHHHHHhhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCCcceEECCCCCCCCceeccCHHHHHHcCC
Confidence            999999999866432         335777 4778999999999999986533222223344556667899999977999


Q ss_pred             Cccc-cCCC
Q 039049          298 VGFK-SVPQ  305 (305)
Q Consensus       298 ~~~~-~l~e  305 (305)
                       +|+ +|+|
T Consensus       295 -~p~~~l~e  302 (315)
T d1e6ua_         295 -YHEISLEA  302 (315)
T ss_dssp             -CCCCCHHH
T ss_pred             -CCCCCHHH
Confidence             998 8754

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=100.00  E-value=4.4e-39  Score=277.62  Aligned_cols=292  Identities=16%  Similarity=0.119  Sum_probs=218.5

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVF   78 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi   78 (305)
                      .|||||||||||||++|++.|+++|++|++++|+..+.......   ....++++++.+|++|++.+.++++  .+|+|+
T Consensus         8 ~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~---~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~   84 (356)
T d1rkxa_           8 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFET---ARVADGMQSEIGDIRDQNKLLESIREFQPEIVF   84 (356)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHH---TTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhh---hhcccCCeEEEeeccChHhhhhhhhhchhhhhh
Confidence            37899999999999999999999999999999987654432111   1123479999999999999999887  679999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchh
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLW  158 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  158 (305)
                      |+|+......+.+.+...+.+|+.++.++++++++.+..+.+++.||..+++....   ..+..|+++..|.      ++
T Consensus        85 ~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~---~~~~~~~~~~~p~------~~  155 (356)
T d1rkxa_          85 HMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEW---IWGYRENEAMGGY------DP  155 (356)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCS---SSCBCTTSCBCCS------SH
T ss_pred             hhhccccccccccCCccccccccccchhhhhhhhcccccccccccccccccccccc---ccccccccccCCC------Cc
Confidence            99998766545566777999999999999999999845555666666554433332   3567777777776      88


Q ss_pred             HHHHHHHHHHHHHHHHH---------HcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCC--CCCCccceeHH
Q 039049          159 YAYAKTIAEKEAWRIAK---------DCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEY--PNTTVGFVHID  227 (305)
Q Consensus       159 Y~~sK~~~E~~~~~~~~---------~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~  227 (305)
                      |+.+|..+|..+..+..         ++++.++++||+++|||+..........++.....+.+...  +...++++|++
T Consensus       156 y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~  235 (356)
T d1rkxa_         156 YSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVL  235 (356)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETH
T ss_pred             cccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeeccccccccccc
Confidence            99999999999887765         44788999999999999865544444556666666655444  34489999999


Q ss_pred             HHHHHHHHhhcccccCc-----eEEE--e-cCCcCHHHHHHHHHHhCCCC-CCCCCCCCCCCCCCCcccchhHHHH-hCC
Q 039049          228 DVVGAHILAMEETRASG-----RLIC--S-SSVAHWSPIIEMLKATYPSY-PYESKCSKQEGDNSPHSMDTSKLFE-LGF  297 (305)
Q Consensus       228 D~a~~~~~~~~~~~~~~-----~~~~--~-~~~~s~~el~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-lg~  297 (305)
                      |++.++..++++....+     ..+.  . +..+++.++++.+.+..+.. .+......++.+...+.+|++|+++ |||
T Consensus       236 D~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~skak~~LGw  315 (356)
T d1rkxa_         236 EPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHEAHYLKLDCSKAKMQLGW  315 (356)
T ss_dssp             HHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC-------CCCCCCBCCHHHHHHHCC
T ss_pred             cccchhhhhhhhhcccccccccccccccccccccccchhhhhhHHHhCCCccEEEcCCCCCCCcCeeeEcHHHHHHHHCC
Confidence            99999999988755422     2333  2 45789999999999998653 2222222344556667899999999 999


Q ss_pred             Cccc-cCCC
Q 039049          298 VGFK-SVPQ  305 (305)
Q Consensus       298 ~~~~-~l~e  305 (305)
                       +|+ +|+|
T Consensus       316 -~P~~~l~e  323 (356)
T d1rkxa_         316 -HPRWNLNT  323 (356)
T ss_dssp             -CCCCCHHH
T ss_pred             -CcCCCHHH
Confidence             998 7753

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=100.00  E-value=8.4e-39  Score=273.74  Aligned_cols=293  Identities=16%  Similarity=0.144  Sum_probs=214.9

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEEEe
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVFHT   80 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi~~   80 (305)
                      ||||||||||||+||+++|+++|++|+++++-.... ....+.... ...+++++.+|+.|.+.+.++++  ++|+|||+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~-~~~~~~~~~-~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~   79 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKG-ATDNLHWLS-SLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL   79 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTT-HHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccc-chhHHHHhh-ccCCcEEEEcccCCHHHHHHHHHhcCCceEEee
Confidence            799999999999999999999999999987532211 111111111 13489999999999999999987  56999999


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCC-------------CcccCCCCCC
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQ-------------VSPLNESHWS  147 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~-------------~~~~~E~~~~  147 (305)
                      |+.........++...+++|+.|+.+|+++|.+. +++++|++||+.+++.......             .....+.++.
T Consensus        80 aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (338)
T d1orra_          80 AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY-NSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQL  158 (338)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCC
T ss_pred             cccccccccccChHHHHHHHHHHHHHHHHhhhcc-cccccccccccccccccccccccccccccccccccccCcccCCcc
Confidence            9987755445566778999999999999999999 8888877777776665432210             0111223333


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCC--chHHHHHHHHh-----cCCCC-CCC-
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPT--STLLLILAMVK-----GLRGE-YPN-  218 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~--~~~~~~~~~~~-----~~~~~-~~~-  218 (305)
                      .|.      +.|+.+|...|.++..+.+.++...+++|++++|++.......  ....++.....     ++++. +++ 
T Consensus       159 ~~~------~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g  232 (338)
T d1orra_         159 DFH------SPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNG  232 (338)
T ss_dssp             CCC------HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSS
T ss_pred             ccc------cccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCC
Confidence            333      8899999999999999999999999999999999876544322  22334443332     23322 233 


Q ss_pred             -CCccceeHHHHHHHHHHhhcccc--cCceEEEe---cCCcCHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCcccchhHH
Q 039049          219 -TTVGFVHIDDVVGAHILAMEETR--ASGRLICS---SSVAHWSPIIEMLKATYPSYPYESKCSKQEGDNSPHSMDTSKL  292 (305)
Q Consensus       219 -~~~~~i~v~D~a~~~~~~~~~~~--~~~~~~~~---~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (305)
                       ..++|+|++|++++++.++++..  .++.|++.   +..+++.|+++.+.+..+..........++.+...+.+|++|+
T Consensus       233 ~~~r~~~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~  312 (338)
T d1orra_         233 KQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVRESDQRVFVADIKKI  312 (338)
T ss_dssp             CCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECCCSSCCSEECBCCHHH
T ss_pred             ceeEeeecccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCceeEeCCCCCCCcCeeeECHHHH
Confidence             38999999999999999997643  35678873   4578999999999999865322222233455666788899999


Q ss_pred             HH-hCCCccc-cCCC
Q 039049          293 FE-LGFVGFK-SVPQ  305 (305)
Q Consensus       293 ~~-lg~~~~~-~l~e  305 (305)
                      ++ ||| +|+ +|+|
T Consensus       313 ~~~Lg~-~p~~sl~e  326 (338)
T d1orra_         313 TNAIDW-SPKVSAKD  326 (338)
T ss_dssp             HHHHCC-CCCSCHHH
T ss_pred             HHHHCC-CcCCCHHH
Confidence            99 999 998 8764

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=100.00  E-value=2.7e-36  Score=251.60  Aligned_cols=258  Identities=13%  Similarity=0.052  Sum_probs=203.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi~   79 (305)
                      |||||||||||||++|+++|.++||+|++++|+.                       +|+.|.+.+.++++  ++|+|||
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~-----------------------~D~~d~~~~~~~l~~~~~d~vih   58 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD-----------------------LDITNVLAVNKFFNEKKPNVVIN   58 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-----------------------CCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh-----------------------ccCCCHHHHHHHHHHcCCCEEEe
Confidence            6799999999999999999999999999997753                       38889988999887  6799999


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhH
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWY  159 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y  159 (305)
                      +|+......+...+......|+..+.++.+.+... . ..+++.||..+++....    .+..|.+++.+.      +.|
T Consensus        59 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~-~~~~~~ss~~v~~~~~~----~~~~e~~~~~~~------~~~  126 (281)
T d1vl0a_          59 CAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSV-G-AEIVQISTDYVFDGEAK----EPITEFDEVNPQ------SAY  126 (281)
T ss_dssp             CCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH-T-CEEEEEEEGGGSCSCCS----SCBCTTSCCCCC------SHH
T ss_pred             eccccccccccccchhhcccccccccccccccccc-c-ccccccccceeeecccc----ccccccccccch------hhh
Confidence            99987755445566778889999999999888776 4 57888888887765432    678899988877      889


Q ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCC-CCCCCccceeHHHHHHHHHHhhc
Q 039049          160 AYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGE-YPNTTVGFVHIDDVVGAHILAME  238 (305)
Q Consensus       160 ~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~~~~~  238 (305)
                      +.+|..+|.+++    +.+.+++++||+++||++.    .....++..+..+.... .++..++|+|++|+++++..+++
T Consensus       127 ~~~k~~~e~~~~----~~~~~~~i~R~~~vyG~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~  198 (281)
T d1vl0a_         127 GKTKLEGENFVK----ALNPKYYIVRTAWLYGDGN----NFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVID  198 (281)
T ss_dssp             HHHHHHHHHHHH----HHCSSEEEEEECSEESSSS----CHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHH
T ss_pred             hhhhhHHHHHHH----HhCCCccccceeEEeCCCc----ccccchhhhhccCCceeecCCceeccchhhhhhhhhhhhhh
Confidence            999999998874    4578999999999999974    34455666666665433 56778999999999999999998


Q ss_pred             ccccCceEEE-ecCCcCHHHHHHHHHHhCCCC----CCCCC-CCCCCCCCCCcccchhHHHH-hCCCccccCC
Q 039049          239 ETRASGRLIC-SSSVAHWSPIIEMLKATYPSY----PYESK-CSKQEGDNSPHSMDTSKLFE-LGFVGFKSVP  304 (305)
Q Consensus       239 ~~~~~~~~~~-~~~~~s~~el~~~i~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~-lg~~~~~~l~  304 (305)
                      +... +.||+ +++.+|+.|+++.+++.+|..    +++.. .......+...++|++|+++ +|| +|++|+
T Consensus       199 ~~~~-g~~~~~~~~~~s~~e~~~~i~~~~g~~~~i~~i~~~~~~~~a~rp~~~~ld~~k~~~~~g~-~~~~~~  269 (281)
T d1vl0a_         199 EKNY-GTFHCTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSVLRNYMLELTTGD-ITREWK  269 (281)
T ss_dssp             HTCC-EEEECCCBSCEEHHHHHHHHHHHHCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHTTCC-CCCBHH
T ss_pred             hccc-CceeEeCCCccchHHHHHHHHHHhCCCceEEeccHHHcCCcCCCccccccCHHHHHHHhCC-CCCCHH
Confidence            8654 67887 578999999999999999752    11111 11111122344689999999 999 887664

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.1e-33  Score=238.37  Aligned_cols=276  Identities=19%  Similarity=0.188  Sum_probs=180.7

Q ss_pred             EEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcch-HHHH-----hcCCCE
Q 039049            4 YCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGS-FDEA-----IQGVDG   76 (305)
Q Consensus         4 ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~-~~~~-----~~~~d~   76 (305)
                      ||||||+||||++|++.|+++|+ +|+++.+-.. ......+...     .    ..|..+.+. ....     +..+++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~-~~~~~~~~~~-----~----~~~~~~~~~~~~~~~~~~~~~~~~~   71 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKD-GTKFVNLVDL-----N----IADYMDKEDFLIQIMAGEEFGDVEA   71 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSS-GGGGHHHHTS-----C----CSEEEEHHHHHHHHHTTCCCSSCCE
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCC-cchhhccccc-----c----hhhhccchHHHHHHhhhhcccchhh
Confidence            89999999999999999999995 7888854322 1111111111     1    112222222 2222     236789


Q ss_pred             EEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccc
Q 039049           77 VFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYN  156 (305)
Q Consensus        77 Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  156 (305)
                      |+|+|+.....  ..+.......|+.++.+++++++.. +++ +|+.||..++++...    ....|+.+..|.      
T Consensus        72 i~~~aa~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~-~i~-~v~~ss~~~~~~~~~----~~~~~~~~~~~~------  137 (307)
T d1eq2a_          72 IFHEGACSSTT--EWDGKYMMDNNYQYSKELLHYCLER-EIP-FLYASSAATYGGRTS----DFIESREYEKPL------  137 (307)
T ss_dssp             EEECCSCCCTT--CCCHHHHHHHTHHHHHHHHHHHHHH-TCC-EEEEEEGGGGTTCCS----CBCSSGGGCCCS------
T ss_pred             hhhhccccccc--ccccccccccccccccccccccccc-ccc-ccccccccccccccc----cccccccccccc------
Confidence            99999876654  3455557889999999999999988 775 677777776665432    334444444444      


Q ss_pred             hhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCC---CchHHHHHHHHhcCCCCC--CCC--CccceeHHHH
Q 039049          157 LWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQP---TSTLLLILAMVKGLRGEY--PNT--TVGFVHIDDV  229 (305)
Q Consensus       157 ~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~--~~~--~~~~i~v~D~  229 (305)
                      +.|+.+|.++|.+++.+.++++++++++||+++|||......   .....++..+..++....  +++  .++|+|++|+
T Consensus       138 ~~Y~~~K~~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~  217 (307)
T d1eq2a_         138 NVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDV  217 (307)
T ss_dssp             SHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHH
T ss_pred             cccccccchhhhhccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccH
Confidence            789999999999999999999999999999999999764331   122344555665654432  333  7999999999


Q ss_pred             HHHHHHhhcccccCceEEE-ecCCcCHHHHHHHHHHhCCCCCCCCC--CCC-CCCCCCCcccchhHHHH-hCCCccc-cC
Q 039049          230 VGAHILAMEETRASGRLIC-SSSVAHWSPIIEMLKATYPSYPYESK--CSK-QEGDNSPHSMDTSKLFE-LGFVGFK-SV  303 (305)
Q Consensus       230 a~~~~~~~~~~~~~~~~~~-~~~~~s~~el~~~i~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~-lg~~~~~-~l  303 (305)
                      +.++..++++.. .+.||+ +++..|++|+++++.+..+...+...  ... ..........|++|+++ +|| +|. +|
T Consensus       218 ~~~~~~~~~~~~-~~~~~~~~~~~~si~~i~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~~k~~~~~~~-~p~~sl  295 (307)
T d1eq2a_         218 ADVNLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYD-KPFKTV  295 (307)
T ss_dssp             HHHHHHHHHHCC-CEEEEESCSCCBCHHHHHHHC---------------------CCCSCCBCCHHHHHTTCC-CCCCCH
T ss_pred             HHHHHHHhhhcc-ccccccccccchhHHHHHHHHHHhcCCCCeeEeeCCccCCCCCceeeecCHHHHHHHHCC-CCCCCH
Confidence            999999998754 467888 58899999999999887754322211  111 22223345669999999 999 987 87


Q ss_pred             CC
Q 039049          304 PQ  305 (305)
Q Consensus       304 ~e  305 (305)
                      +|
T Consensus       296 ~e  297 (307)
T d1eq2a_         296 AE  297 (307)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=100.00  E-value=2.3e-33  Score=235.43  Aligned_cols=263  Identities=11%  Similarity=0.048  Sum_probs=190.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi~   79 (305)
                      |||||||||||||++|++.|.++|+.| ++.+...                   .+.+|+.|.+.+.++++  ++|+|||
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~~v-~~~~~~~-------------------~~~~Dl~~~~~~~~~i~~~~~D~Vih   60 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGNLI-ALDVHSK-------------------EFCGDFSNPKGVAETVRKLRPDVIVN   60 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSEEE-EECTTCS-------------------SSCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEE-EEECCCc-------------------cccCcCCCHHHHHHHHHHcCCCEEEE
Confidence            569999999999999999999988744 4444322                   12479999999999887  6799999


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhH
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWY  159 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y  159 (305)
                      +||......+.+.+...++.|+.++.+++++|++. + .+++++||+.+|+...    ..|.+|++++.|.      +.|
T Consensus        61 ~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~~~~ss~~~~~~~~----~~~~~E~~~~~p~------~~y  128 (298)
T d1n2sa_          61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANET-G-AWVVHYSTDYVFPGTG----DIPWQETDATSPL------NVY  128 (298)
T ss_dssp             CCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTT-T-CEEEEEEEGGGSCCCT----TCCBCTTSCCCCS------SHH
T ss_pred             ecccccccccccCccccccccccccccchhhhhcc-c-cccccccccccccCCC----CCCCccccccCCC------chH
Confidence            99987665556677778999999999999999887 6 5788889988776543    3688999998887      889


Q ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCC-CCCCCccceeHHHHHHHHHHhhc
Q 039049          160 AYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGE-YPNTTVGFVHIDDVVGAHILAME  238 (305)
Q Consensus       160 ~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~~~~~  238 (305)
                      +.+|..+|..++.+    .....++|++..|+....   .....+...+..+..+. .+...++++|+.|+++++..+++
T Consensus       129 ~~~k~~~e~~~~~~----~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~  201 (298)
T d1n2sa_         129 GKTKLAGEKALQDN----CPKHLIFRTSWVYAGKGN---NFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIR  201 (298)
T ss_dssp             HHHHHHHHHHHHHH----CSSEEEEEECSEECSSSC---CHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHH
T ss_pred             hhhhhhhhhhHHhh----hcccccccccceeeccCC---ccchhhhhhhcccceeecccceeecccccchHHHHHHHHHh
Confidence            99999999988643    345566676666654322   22223334444444433 34457899999999999988875


Q ss_pred             ----ccccCceEEEe-cCCcCHHHHHHHHHHhCCC----CCCCC------C-CCCCCCCCCCcccchhHHHH-hCCCccc
Q 039049          239 ----ETRASGRLICS-SSVAHWSPIIEMLKATYPS----YPYES------K-CSKQEGDNSPHSMDTSKLFE-LGFVGFK  301 (305)
Q Consensus       239 ----~~~~~~~~~~~-~~~~s~~el~~~i~~~~~~----~~~~~------~-~~~~~~~~~~~~~~~~~~~~-lg~~~~~  301 (305)
                          .+...+.||++ ++.++..++++.+.+..+.    ...+.      . .......+....+|++|+++ +|| +|+
T Consensus       202 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~a~RP~~~~ld~~K~~~~~~~-~~~  280 (298)
T d1n2sa_         202 VALNKPEVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDL-ILP  280 (298)
T ss_dssp             HHHHCGGGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHHHTC-CCC
T ss_pred             hhhccccccccccccCCCceecHHHHHHHHhhhhccCccccccceeeeehhhcCccCCCccccccCHHHHHHHHCC-CCC
Confidence                34456789986 5789999999999876522    11110      0 00011112345789999999 999 887


Q ss_pred             cCC
Q 039049          302 SVP  304 (305)
Q Consensus       302 ~l~  304 (305)
                      +|+
T Consensus       281 ~~~  283 (298)
T d1n2sa_         281 QWE  283 (298)
T ss_dssp             BHH
T ss_pred             cHH
Confidence            765

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=2.4e-31  Score=215.06  Aligned_cols=206  Identities=16%  Similarity=0.112  Sum_probs=159.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC--eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH--MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~   79 (305)
                      |+|||||||||||++|+++|+++|+  +|++++|++.+.....        ..+++...+|+.+.+.+.++++++|+|||
T Consensus        15 k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~--------~~~i~~~~~D~~~~~~~~~~~~~~d~vi~   86 (232)
T d2bkaa1          15 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA--------YKNVNQEVVDFEKLDDYASAFQGHDVGFC   86 (232)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG--------GGGCEEEECCGGGGGGGGGGGSSCSEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc--------cceeeeeeecccccccccccccccccccc
Confidence            6799999999999999999999994  8999999875433211        23678888999999999999999999999


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhH
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWY  159 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y  159 (305)
                      +++...   .......+.++|+.++.+++++|++. ++++|||+||..++...                 .      +.|
T Consensus        87 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~a~~~-~v~~fi~~Ss~~~~~~~-----------------~------~~Y  139 (232)
T d2bkaa1          87 CLGTTR---GKAGAEGFVRVDRDYVLKSAELAKAG-GCKHFNLLSSKGADKSS-----------------N------FLY  139 (232)
T ss_dssp             CCCCCH---HHHHHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTTC-----------------S------SHH
T ss_pred             cccccc---cccchhhhhhhcccccceeeeccccc-CccccccCCccccccCc-----------------c------chh
Confidence            998764   33455668899999999999999998 99999999998754321                 1      669


Q ss_pred             HHHHHHHHHHHHHHHHHcCCc-EEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhc
Q 039049          160 AYAKTIAEKEAWRIAKDCGID-MVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAME  238 (305)
Q Consensus       160 ~~sK~~~E~~~~~~~~~~~~~-~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  238 (305)
                      +.+|..+|+.++.    .+++ ++|+||+.+||+.....  ....++.......+  .+......|+++|+|++++.++.
T Consensus       140 ~~~K~~~E~~l~~----~~~~~~~IlRP~~i~G~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~I~~~dvA~a~i~~~~  211 (232)
T d2bkaa1         140 LQVKGEVEAKVEE----LKFDRYSVFRPGVLLCDRQESR--PGEWLVRKFFGSLP--DSWASGHSVPVVTVVRAMLNNVV  211 (232)
T ss_dssp             HHHHHHHHHHHHT----TCCSEEEEEECCEEECTTGGGS--HHHHHHHHHHCSCC--TTGGGGTEEEHHHHHHHHHHHHT
T ss_pred             HHHHHHhhhcccc----ccccceEEecCceeecCCCcCc--HHHHHHHHHhhccC--CcccCCCeEEHHHHHHHHHHHHh
Confidence            9999999998753    4664 89999999999865421  22222233322211  11224567999999999999999


Q ss_pred             ccccCceEEEec
Q 039049          239 ETRASGRLICSS  250 (305)
Q Consensus       239 ~~~~~~~~~~~~  250 (305)
                      ++..++.+.+++
T Consensus       212 ~~~~~~~~i~~~  223 (232)
T d2bkaa1         212 RPRDKQMELLEN  223 (232)
T ss_dssp             SCCCSSEEEEEH
T ss_pred             cCccCCeEEEcH
Confidence            888878777764

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.2e-30  Score=205.45  Aligned_cols=200  Identities=16%  Similarity=0.116  Sum_probs=154.5

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ||||+||||||+||++++++|+++||+|++++|++++....        ...+++++.+|+.|.+++.++++++|+|||+
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~--------~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~   74 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE--------GPRPAHVVVGDVLQAADVDKTVAGQDAVIVL   74 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS--------SCCCSEEEESCTTSHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc--------cccccccccccccchhhHHHHhcCCCEEEEE
Confidence            79999999999999999999999999999999987654321        1237899999999999999999999999999


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHH
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYA  160 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  160 (305)
                      +|.....       .....+..++.+++++++++ +++|||++||..+++....           .+...      ..|.
T Consensus        75 ~g~~~~~-------~~~~~~~~~~~~l~~aa~~~-~v~r~i~~ss~~~~~~~~~-----------~~~~~------~~~~  129 (205)
T d1hdoa_          75 LGTRNDL-------SPTTVMSEGARNIVAAMKAH-GVDKVVACTSAFLLWDPTK-----------VPPRL------QAVT  129 (205)
T ss_dssp             CCCTTCC-------SCCCHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCTTC-----------SCGGG------HHHH
T ss_pred             eccCCch-------hhhhhhHHHHHHHHHHHHhc-CCCeEEEEeeeeccCCCcc-----------ccccc------cccc
Confidence            9875422       13456788999999999999 9999999999876544211           01111      5688


Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhccc
Q 039049          161 YAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       161 ~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  240 (305)
                      ..|..+|++++    +.+++++++||+.+++........             ....+.....+|+++|+|++++.+++++
T Consensus       130 ~~~~~~e~~l~----~~~~~~tiirp~~~~~~~~~~~~~-------------~~~~~~~~~~~i~~~DvA~~~~~~l~~~  192 (205)
T d1hdoa_         130 DDHIRMHKVLR----ESGLKYVAVMPPHIGDQPLTGAYT-------------VTLDGRGPSRVISKHDLGHFMLRCLTTD  192 (205)
T ss_dssp             HHHHHHHHHHH----HTCSEEEEECCSEEECCCCCSCCE-------------EESSSCSSCSEEEHHHHHHHHHHTTSCS
T ss_pred             hHHHHHHHHHH----hcCCceEEEecceecCCCCcccEE-------------EeeCCCCCCCcCCHHHHHHHHHHHhCCC
Confidence            99999998774    579999999999998754321110             0112333678999999999999999987


Q ss_pred             cc-CceEEEec
Q 039049          241 RA-SGRLICSS  250 (305)
Q Consensus       241 ~~-~~~~~~~~  250 (305)
                      +- +..+.++.
T Consensus       193 ~~~g~~~~~s~  203 (205)
T d1hdoa_         193 EYDGHSTYPSH  203 (205)
T ss_dssp             TTTTCEEEEEC
T ss_pred             CCCCEEEecCC
Confidence            74 44455543

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.96  E-value=8.2e-30  Score=214.90  Aligned_cols=232  Identities=17%  Similarity=0.155  Sum_probs=166.6

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccc--hhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSK--VGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      ++||||||||||||++|+++|+++||+|++++|++.....  ...+....  ..+++++++|+.|.+.+.+++.++++++
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~--~~~v~~v~~d~~d~~~~~~~~~~~~~~~   80 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK--QLGAKLIEASLDDHQRLVDALKQVDVVI   80 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH--TTTCEEECCCSSCHHHHHHHHTTCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhc--cCCcEEEEeecccchhhhhhccCcchhh
Confidence            4689999999999999999999999999999998654321  11121111  3478999999999999999999999999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchh
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLW  158 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  158 (305)
                      |+++...           ...|..++.+++++|++. +..++++.||.++...          .+..+..+.      ..
T Consensus        81 ~~~~~~~-----------~~~~~~~~~~~l~~a~~~-~~~~~v~~Ss~g~~~~----------~~~~~~~~~------~~  132 (312)
T d1qyda_          81 SALAGGV-----------LSHHILEQLKLVEAIKEA-GNIKRFLPSEFGMDPD----------IMEHALQPG------SI  132 (312)
T ss_dssp             ECCCCSS-----------SSTTTTTHHHHHHHHHHS-CCCSEEECSCCSSCTT----------SCCCCCSST------TH
T ss_pred             hhhhhcc-----------cccchhhhhHHHHHHHHh-cCCcEEEEeeccccCC----------Ccccccchh------hh
Confidence            9987643           345566788899999888 6677888887554222          222222222      55


Q ss_pred             HHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCC--CCCCccceeHHHHHHHHHHh
Q 039049          159 YAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEY--PNTTVGFVHIDDVVGAHILA  236 (305)
Q Consensus       159 Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~D~a~~~~~~  236 (305)
                      |..+|..+++.    ....+++++++||+.+||+............  ....+....+  ++..++|+|++|+|++++.+
T Consensus       133 ~~~~~~~~~~~----~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~  206 (312)
T d1qyda_         133 TFIDKRKVRRA----IEAASIPYTYVSSNMFAGYFAGSLAQLDGHM--MPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKS  206 (312)
T ss_dssp             HHHHHHHHHHH----HHHTTCCBCEEECCEEHHHHTTTSSCTTCCS--SCCSSEECCBTTSCSEEEEECHHHHHHHHHHH
T ss_pred             hhHHHHHHHHh----hcccccceEEeccceeecCCccchhhHHHHh--hhcccccccccccccccceeeHHHHHHHHHHH
Confidence            77777766654    4567899999999999997644322111000  0011222223  34489999999999999999


Q ss_pred             hcccccC-ce-EEEe-cCCcCHHHHHHHHHHhCCC
Q 039049          237 MEETRAS-GR-LICS-SSVAHWSPIIEMLKATYPS  268 (305)
Q Consensus       237 ~~~~~~~-~~-~~~~-~~~~s~~el~~~i~~~~~~  268 (305)
                      ++++... +. |+++ ++.+|++|+++.+.+.+|.
T Consensus       207 l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~  241 (312)
T d1qyda_         207 IDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQ  241 (312)
T ss_dssp             TTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTC
T ss_pred             hcCccccCceEEEeCCCcCCCHHHHHHHHHHHHCC
Confidence            9987764 44 5555 5689999999999998864

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.96  E-value=2.5e-28  Score=198.74  Aligned_cols=229  Identities=19%  Similarity=0.121  Sum_probs=163.4

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCe--EEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHM--VRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      |++|||||||||||+++++.|+++|++  |+++.|++++....         ..+++++.+|+.+.+.+.++++++|+||
T Consensus         3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~---------~~~~~~~~~d~~~~~~~~~~~~~~d~vi   73 (252)
T d2q46a1           3 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI---------GGEADVFIGDITDADSINPAFQGIDALV   73 (252)
T ss_dssp             CCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT---------TCCTTEEECCTTSHHHHHHHHTTCSEEE
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc---------cCCcEEEEeeeccccccccccccceeeE
Confidence            899999999999999999999999975  56677766432211         2378899999999999999999999999


Q ss_pred             EeccccccCC-------------CCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           79 HTASPVLVPY-------------DNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        79 ~~a~~~~~~~-------------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      |+|+......             ..........+|+.++.+++..+... ..+.+.+.|+..++...             
T Consensus        74 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~-------------  139 (252)
T d2q46a1          74 ILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-GVKHIVVVGSMGGTNPD-------------  139 (252)
T ss_dssp             ECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-TCSEEEEEEETTTTCTT-------------
T ss_pred             EEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccc-cccccccccccccCCCC-------------
Confidence            9998765321             12234556788999999999999888 88888888876543221             


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcccee
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVH  225 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  225 (305)
                        .+.... ....|...+.+.+.    +..+.+++++++||+++||+.......         ..+..........++||
T Consensus       140 --~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~ilRp~~v~g~~~~~~~~---------~~~~~~~~~~~~~~~i~  203 (252)
T d2q46a1         140 --HPLNKL-GNGNILVWKRKAEQ----YLADSGTPYTIIRAGGLLDKEGGVREL---------LVGKDDELLQTDTKTVP  203 (252)
T ss_dssp             --CGGGGG-GGCCHHHHHHHHHH----HHHHSSSCEEEEEECEEECSCTTSSCE---------EEESTTGGGGSSCCEEE
T ss_pred             --cccccc-cccchhhhhhhhhh----hhhcccccceeecceEEECCCcchhhh---------hhccCcccccCCCCeEE
Confidence              111000 01335555555444    346679999999999999997432211         01111122333678999


Q ss_pred             HHHHHHHHHHhhcccccC-ceEEEec----CCcCHHHHHHHHHHhCCC
Q 039049          226 IDDVVGAHILAMEETRAS-GRLICSS----SVAHWSPIIEMLKATYPS  268 (305)
Q Consensus       226 v~D~a~~~~~~~~~~~~~-~~~~~~~----~~~s~~el~~~i~~~~~~  268 (305)
                      ++|+|++++.+++++... ..||+++    ...+++|+.+++.+..++
T Consensus       204 ~~Dva~a~~~~l~~~~~~g~~~~i~~~~~~~~~~~~~~~~lf~~i~~r  251 (252)
T d2q46a1         204 RADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR  251 (252)
T ss_dssp             HHHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHTTCCCC
T ss_pred             HHHHHHHHHHHhCCccccCcEEEEeeCCCCCChhHHHHHHHHHHHHhc
Confidence            999999999999988765 4799853    246788888888776643

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.95  E-value=4e-28  Score=193.45  Aligned_cols=193  Identities=14%  Similarity=0.138  Sum_probs=135.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC--eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHh-cCCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH--MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAI-QGVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-~~~d~Vi   78 (305)
                      |||||||||||||++|+++|+++|+  +|++++|++....            +.+   ..+..|..++.+.+ ..+|+||
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~------------~~~---~~~~~d~~~~~~~~~~~~d~vi   67 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEH------------PRL---DNPVGPLAELLPQLDGSIDTAF   67 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCC------------TTE---ECCBSCHHHHGGGCCSCCSEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhc------------ccc---cccccchhhhhhccccchheee
Confidence            7899999999999999999999997  6777777654211            122   23333433333333 3689999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchh
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLW  158 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  158 (305)
                      ||+|.....  ......+.+.|+.++.+++++|++. ++++|+++||..++...                 .      +.
T Consensus        68 ~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~a~~~-~v~~~i~~Ss~~~~~~~-----------------~------~~  121 (212)
T d2a35a1          68 CCLGTTIKE--AGSEEAFRAVDFDLPLAVGKRALEM-GARHYLVVSALGADAKS-----------------S------IF  121 (212)
T ss_dssp             ECCCCCHHH--HSSHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTTC-----------------S------SH
T ss_pred             eeeeeeccc--cccccccccchhhhhhhcccccccc-ccccccccccccccccc-----------------c------cc
Confidence            999876432  2234568899999999999999998 99999999998764321                 1      66


Q ss_pred             HHHHHHHHHHHHHHHHHHcCC-cEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhh
Q 039049          159 YAYAKTIAEKEAWRIAKDCGI-DMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAM  237 (305)
Q Consensus       159 Y~~sK~~~E~~~~~~~~~~~~-~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~  237 (305)
                      |+.+|..+|+.++    +.++ +++|+||+.+||+........       ...........+...+||++|+|++++.++
T Consensus       122 y~~~K~~~E~~l~----~~~~~~~~I~Rp~~v~G~~~~~~~~~-------~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~  190 (212)
T d2a35a1         122 YNRVKGELEQALQ----EQGWPQLTIARPSLLFGPREEFRLAE-------ILAAPIARILPGKYHGIEACDLARALWRLA  190 (212)
T ss_dssp             HHHHHHHHHHHHT----TSCCSEEEEEECCSEESTTSCEEGGG-------GTTCCCC----CHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHhhhcc----ccccccceeeCCcceeCCcccccHHH-------HHHHHHhhccCCCCcEEEHHHHHHHHHHHH
Confidence            9999999999874    3455 599999999999975432111       001111111122456799999999999999


Q ss_pred             cccccCceE
Q 039049          238 EETRASGRL  246 (305)
Q Consensus       238 ~~~~~~~~~  246 (305)
                      +++..+..|
T Consensus       191 ~~~~~g~~~  199 (212)
T d2a35a1         191 LEEGKGVRF  199 (212)
T ss_dssp             TCCCSEEEE
T ss_pred             cCCCCCCEE
Confidence            987654433

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.95  E-value=5.3e-28  Score=202.89  Aligned_cols=227  Identities=19%  Similarity=0.215  Sum_probs=162.2

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhcc-CccCceEEEEccCCCcchHHHHhcCCCEEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELN-GAEERLKIMKADLLMEGSFDEAIQGVDGVFH   79 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~   79 (305)
                      +|||||||||||||++|+++|++.|++|++++|++............. ....+++++.+|+.+...+.+.+++++.|+|
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi~   82 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS   82 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeeee
Confidence            478999999999999999999999999999999876543222211111 1133688999999999999999999999999


Q ss_pred             eccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhH
Q 039049           80 TASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWY  159 (305)
Q Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y  159 (305)
                      +++...               ..++.++++++... +++++++.||....           .++.....+.      ..+
T Consensus        83 ~~~~~~---------------~~~~~~~~~a~~~~-~~~~~~~~s~~~~~-----------~~~~~~~~~~------~~~  129 (307)
T d1qyca_          83 TVGSLQ---------------IESQVNIIKAIKEV-GTVKRFFPSEFGND-----------VDNVHAVEPA------KSV  129 (307)
T ss_dssp             CCCGGG---------------SGGGHHHHHHHHHH-CCCSEEECSCCSSC-----------TTSCCCCTTH------HHH
T ss_pred             cccccc---------------cchhhHHHHHHHHh-ccccceeeeccccc-----------cccccccccc------ccc
Confidence            987633               33456778888888 88889998875421           1222222222      446


Q ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCC---CCCCCCccceeHHHHHHHHHHh
Q 039049          160 AYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRG---EYPNTTVGFVHIDDVVGAHILA  236 (305)
Q Consensus       160 ~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~v~D~a~~~~~~  236 (305)
                      ...+...+..+    .+.+++++++||+++||+........    +....++...   ..++..++|+|++|+|++++.+
T Consensus       130 ~~~~~~~~~~~----~~~~~~~~i~r~~~v~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  201 (307)
T d1qyca_         130 FEVKAKVRRAI----EAEGIPYTYVSSNCFAGYFLRSLAQA----GLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKA  201 (307)
T ss_dssp             HHHHHHHHHHH----HHHTCCBEEEECCEEHHHHTTTTTCT----TCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTT
T ss_pred             ccccccccchh----hccCCCceecccceecCCCccchhhh----hhhhhhcccceeeecccccccCCcHHHHHHHHHHH
Confidence            66666666554    45689999999999999864332111    1111122211   1245589999999999999999


Q ss_pred             hcccccC-ce-EEEe-cCCcCHHHHHHHHHHhCCC
Q 039049          237 MEETRAS-GR-LICS-SSVAHWSPIIEMLKATYPS  268 (305)
Q Consensus       237 ~~~~~~~-~~-~~~~-~~~~s~~el~~~i~~~~~~  268 (305)
                      ++++... +. |+++ ++.+|+.|+++.+.+++|.
T Consensus       202 l~~~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~G~  236 (307)
T d1qyca_         202 VDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDK  236 (307)
T ss_dssp             SSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTS
T ss_pred             hcChhhcCceeEEeCCCCccCHHHHHHHHHHHHCC
Confidence            9987654 33 5554 6789999999999999975

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.92  E-value=5.5e-25  Score=188.39  Aligned_cols=224  Identities=16%  Similarity=0.127  Sum_probs=159.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcch-HHHHhcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGS-FDEAIQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~-~~~~~~~~d~Vi~~   80 (305)
                      |+|+|||||||||++|++.|+++||+|++++|++++.... .+.    ...+++.+++|+.|..+ +..++.+++.++++
T Consensus         4 ktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~-~~~----~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~   78 (350)
T d1xgka_           4 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAE-ELQ----AIPNVTLFQGPLLNNVPLMDTLFEGAHLAFIN   78 (350)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHH-HHH----TSTTEEEEESCCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhh-hhc----ccCCCEEEEeeCCCcHHHHHHHhcCCceEEee
Confidence            7899999999999999999999999999999987654321 111    13479999999998654 67788899998877


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHH
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYA  160 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~  160 (305)
                      ....            ...++..+.+++++|.++ ++++++++||.........             .+.      ..|.
T Consensus        79 ~~~~------------~~~~~~~~~~~~~aa~~a-gv~~~v~~Ss~~~~~~~~~-------------~~~------~~~~  126 (350)
T d1xgka_          79 TTSQ------------AGDEIAIGKDLADAAKRA-GTIQHYIYSSMPDHSLYGP-------------WPA------VPMW  126 (350)
T ss_dssp             CCST------------TSCHHHHHHHHHHHHHHH-SCCSEEEEEECCCGGGTSS-------------CCC------CTTT
T ss_pred             cccc------------cchhhhhhhHHHHHHHHh-CCCceEEEeeccccccCCc-------------ccc------hhhh
Confidence            5432            234566789999999999 8888888888653222111             011      4467


Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcC----CCCCCCCCccceeH-HHHHHHHHH
Q 039049          161 YAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGL----RGEYPNTTVGFVHI-DDVVGAHIL  235 (305)
Q Consensus       161 ~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~v-~D~a~~~~~  235 (305)
                      .+|...|.++    ...+++++++||+.+++...........  ......+.    ....++..++++++ +|+++++..
T Consensus       127 ~~k~~~~~~~----~~~~~~~~~vr~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~  200 (350)
T d1xgka_         127 APKFTVENYV----RQLGLPSTFVYAGIYNNNFTSLPYPLFQ--MELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQ  200 (350)
T ss_dssp             HHHHHHHHHH----HTSSSCEEEEEECEEGGGCBSSSCSSCB--EEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHH
T ss_pred             hhHHHHHHHH----HhhccCceeeeeceeecccccccccccc--ccccccccceeeecccCCCcceEEEeHHHHHHHHHH
Confidence            7787777765    4568999999999998865332221100  00000111    11224557888886 799999999


Q ss_pred             hhcccc---cCceEEEecCCcCHHHHHHHHHHhCCC
Q 039049          236 AMEETR---ASGRLICSSSVAHWSPIIEMLKATYPS  268 (305)
Q Consensus       236 ~~~~~~---~~~~~~~~~~~~s~~el~~~i~~~~~~  268 (305)
                      +++...   .+..|+++++.+|+.|+++.+.+++|+
T Consensus       201 ~l~~~~~~~~G~~~~~~g~~~T~~eia~~l~~~~G~  236 (350)
T d1xgka_         201 IFKDGPQKWNGHRIALTFETLSPVQVCAAFSRALNR  236 (350)
T ss_dssp             HHHHCHHHHTTCEEEECSEEECHHHHHHHHHHHHTS
T ss_pred             HHhCChhhcCCeEEEEeCCcCCHHHHHHHHHHHHCC
Confidence            987643   255788888889999999999999975

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.90  E-value=1.2e-22  Score=163.38  Aligned_cols=207  Identities=17%  Similarity=0.177  Sum_probs=151.5

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      .|+++||||++.||+++++.|++.|++|++..|+.+...             ++..+++|++|+++++++++       +
T Consensus         7 gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~-------------~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   73 (237)
T d1uzma1           7 SRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK-------------GLFGVEVDVTDSDAVDRAFTAVEEHQGP   73 (237)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-------------TSEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhc-------------CceEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            378999999999999999999999999999999875432             56788999999998887764       6


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|++|||||......    +.+.+...+++|+.++..+.+.+    ++. +..++|++||.....+.+..          
T Consensus        74 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~g~Iv~isS~~~~~~~~~~----------  142 (237)
T d1uzma1          74 VEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN-KFGRMIFIGSVSGLWGIGNQ----------  142 (237)
T ss_dssp             CSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCCCC-----CC----------
T ss_pred             ceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccc-CCCceEEEcchhhccCCccc----------
Confidence            899999999866543    46678889999999998887765    334 55699999998765443221          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                                 ..|+.||...+.+.+.++.+.   |+++..+.|+.+..+.....   ............+      ..-
T Consensus       143 -----------~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~---~~~~~~~~~~~~p------l~R  202 (237)
T d1uzma1         143 -----------ANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL---DERIQQGALQFIP------AKR  202 (237)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS---CHHHHHHHGGGCT------TCS
T ss_pred             -----------HHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhcc---CHHHHHHHHhcCC------CCC
Confidence                       679999999999999888764   89999999999876532111   0111112211111      334


Q ss_pred             ceeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          223 FVHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      +..++|+|.++.+++.....   +..+.+.|.
T Consensus       203 ~~~pedvA~~v~fL~S~~s~~itG~~i~vdGG  234 (237)
T d1uzma1         203 VGTPAEVAGVVSFLASEDASYISGAVIPVDGG  234 (237)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence            68899999999999975432   445666543

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.89  E-value=3e-22  Score=163.15  Aligned_cols=223  Identities=15%  Similarity=0.130  Sum_probs=159.6

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      .|+++||||++.||+++++.|++.|++|++..|+.+................++..+++|+.|+++++++++       +
T Consensus         4 gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~   83 (258)
T d1iy8a_           4 DRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGR   83 (258)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhCC
Confidence            378999999999999999999999999999999876544332222222224478899999999998888764       6


Q ss_pred             CCEEEEeccccccC-----CCCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVP-----YDNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|++|||||.....     .+.+.+...+++|+.++..+.+++...   .+-.++|++||.....+.+..          
T Consensus        84 iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~----------  153 (258)
T d1iy8a_          84 IDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQ----------  153 (258)
T ss_dssp             CSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSB----------
T ss_pred             CCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCc----------
Confidence            89999999965432     145678889999999999999876322   145689999998754433221          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCC-----CCCchHHHHHHHHhcCCCCCC
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAP-----QPTSTLLLILAMVKGLRGEYP  217 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~  217 (305)
                                 ..|+.+|...+.+.+.++.+.   |+++..+.||.+..+....     ................+    
T Consensus       154 -----------~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p----  218 (258)
T d1iy8a_         154 -----------SGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNP----  218 (258)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCT----
T ss_pred             -----------hHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCC----
Confidence                       679999999999999888764   7999999999987653110     00011112222222222    


Q ss_pred             CCCccceeHHHHHHHHHHhhccccc---CceEEEec
Q 039049          218 NTTVGFVHIDDVVGAHILAMEETRA---SGRLICSS  250 (305)
Q Consensus       218 ~~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~  250 (305)
                        ..-+..++|+|.++++++.....   +..+.+.|
T Consensus       219 --l~R~~~p~dvA~~v~fL~S~~s~~itG~~i~VDG  252 (258)
T d1iy8a_         219 --SKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDG  252 (258)
T ss_dssp             --TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             --CCCCcCHHHHHHHHHHHhCchhcCCcCceEEcCc
Confidence              34478899999999999975432   34566654

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.89  E-value=2.5e-22  Score=162.53  Aligned_cols=216  Identities=13%  Similarity=0.060  Sum_probs=155.0

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      .|++|||||++.||+++++.|+++|++|++..|+++..+.....        +..++++|++|.++++++++       +
T Consensus         5 GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~--------~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   76 (248)
T d2d1ya1           5 GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAI--------GGAFFQVDLEDERERVRFVEEAAYALGR   76 (248)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHH--------TCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc--------CCeEEEEeCCCHHHHHHHHHHHHHhcCC
Confidence            37899999999999999999999999999999987643222111        45788999999988887764       6


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      +|++|||||...+..    ..+.+...+++|+.++.++.+++...   .+-.++|++||.....+.+..           
T Consensus        77 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~-----------  145 (248)
T d2d1ya1          77 VDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQEN-----------  145 (248)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTB-----------
T ss_pred             CCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccccccccccc-----------
Confidence            899999999876543    45677889999999999999887432   145699999998765443221           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCC---CCchHHHHHHHHhcCCCCCCCCC
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQ---PTSTLLLILAMVKGLRGEYPNTT  220 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  220 (305)
                                ..|+.+|...+.+.+.++.++   |+++..+.|+.+-.+.....   ...............+      .
T Consensus       146 ----------~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p------l  209 (248)
T d2d1ya1         146 ----------AAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHA------L  209 (248)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTST------T
T ss_pred             ----------chhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCC------C
Confidence                      679999999999998888774   89999999998865421000   0000001111111111      3


Q ss_pred             ccceeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          221 VGFVHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       221 ~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      ..+..++|+|.++.+++.....   +..+.+.|.
T Consensus       210 ~R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG  243 (248)
T d2d1ya1         210 RRLGKPEEVAEAVLFLASEKASFITGAILPVDGG  243 (248)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCcCHHHHHHHHHHHhCchhcCCCCcEEEcCcC
Confidence            4467899999999999975432   445777543

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=3.5e-22  Score=161.43  Aligned_cols=216  Identities=18%  Similarity=0.143  Sum_probs=160.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc---CCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ---GVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~Vi   78 (305)
                      |++|||||++.||+++++.|++.|++|++.+|+.++..+..      ....++..+.+|+.|.++++++++   ++|++|
T Consensus         8 K~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~------~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilV   81 (244)
T d1pr9a_           8 RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLV------RECPGIEPVCVDLGDWEATERALGSVGPVDLLV   81 (244)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH------HHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH------HhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEE
Confidence            68999999999999999999999999999999865433221      112367899999999999999886   579999


Q ss_pred             EeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcc
Q 039049           79 HTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKK----AKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPD  150 (305)
Q Consensus        79 ~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~  150 (305)
                      |||+......    +.+.+...+++|+.++..+.+.+..    ..+..++|++||.....+.+..               
T Consensus        82 nnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~---------------  146 (244)
T d1pr9a_          82 NNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNH---------------  146 (244)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTB---------------
T ss_pred             eccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccch---------------
Confidence            9999876543    4667888999999999988887643    1244689999998754332221               


Q ss_pred             cccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHH
Q 039049          151 YCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHID  227 (305)
Q Consensus       151 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  227 (305)
                            ..|+.||...+.+.+.++.++   ++++..+.||.+..+........ ...........+      ...+..++
T Consensus       147 ------~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~-~~~~~~~~~~~p------l~R~~~pe  213 (244)
T d1pr9a_         147 ------SVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSD-PHKAKTMLNRIP------LGKFAEVE  213 (244)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCS-HHHHHHHHTTCT------TCSCBCHH
T ss_pred             ------hhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccC-hHHHHHHHhcCC------CCCCcCHH
Confidence                  669999999999999988764   79999999999987643221111 222233333222      34478899


Q ss_pred             HHHHHHHHhhcccc---cCceEEEecC
Q 039049          228 DVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       228 D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      |+|.++.+++....   .+..+.+.|.
T Consensus       214 evA~~v~fL~S~~a~~itG~~i~vDGG  240 (244)
T d1pr9a_         214 HVVNAILFLLSDRSGMTTGSTLPVEGG  240 (244)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHhCchhCCcCCcEEEECcc
Confidence            99999999987543   2445666543

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.89  E-value=2.8e-22  Score=162.69  Aligned_cols=217  Identities=13%  Similarity=0.098  Sum_probs=159.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |.++||||++.||+++++.|++.|++|++.+|+.+...+...  .+...+.++.++++|++|++++.++++       .+
T Consensus        11 KvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~--~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i   88 (251)
T d2c07a1          11 KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVD--EIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV   88 (251)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHH--HHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHH--HHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Confidence            679999999999999999999999999999998765443222  222334578999999999998887765       68


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |++||+|+......    ..+.+...+++|+.++..+.+++.    +. +-.++|++||.....+.+..           
T Consensus        89 Dilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~IVnisS~~~~~~~~~~-----------  156 (251)
T d2c07a1          89 DILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN-RYGRIINISSIVGLTGNVGQ-----------  156 (251)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-TCEEEEEECCTHHHHCCTTC-----------
T ss_pred             eeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccC-CCeEEEEECCHHhcCCCCCC-----------
Confidence            99999999876543    456788899999999999988763    33 45699999998765433221           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                                ..|+.||...+.+.+.++.++   |+++..+.||.+-.+.....   ............+      ..-+
T Consensus       157 ----------~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~---~~~~~~~~~~~~p------l~R~  217 (251)
T d2c07a1         157 ----------ANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI---SEQIKKNIISNIP------AGRM  217 (251)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C---CHHHHHHHHTTCT------TSSC
T ss_pred             ----------HHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccccccc---CHHHHHHHHhcCC------CCCC
Confidence                      679999999999999998764   79999999999987754322   1223333333322      3347


Q ss_pred             eeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          224 VHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      ...+|+|.++.+++.....   +..+.+.|.
T Consensus       218 ~~pedvA~~v~fL~S~~s~~itG~~i~vDGG  248 (251)
T d2c07a1         218 GTPEEVANLACFLSSDKSGYINGRVFVIDGG  248 (251)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHHhCchhCCCcCcEEEECCC
Confidence            8899999999999975442   445666543

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=1.9e-22  Score=162.77  Aligned_cols=216  Identities=14%  Similarity=0.110  Sum_probs=159.2

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      .|+++||||++.||+++++.|+++|++|++..|+++...+...   ..  ..++..+++|++|+++++++++       +
T Consensus         4 gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~---~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   78 (243)
T d1q7ba_           4 GKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISD---YL--GANGKGLMLNVTDPASIESVLEKIRAEFGE   78 (243)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---HH--GGGEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---Hh--CCCCcEEEEEecCHHHhhhhhhhhhcccCC
Confidence            3789999999999999999999999999999998654433221   11  2367889999999988887765       6


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      +|++||+|+......    ..+.+...+++|+.++..+.+++...   .+-.++|++||.....+.+..           
T Consensus        79 iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~-----------  147 (243)
T d1q7ba_          79 VDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQ-----------  147 (243)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTC-----------
T ss_pred             cceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCC-----------
Confidence            899999999876653    45678889999999999999887432   144689999998765433221           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                                ..|+.||.+.+.+.+.++.++   |+++..+.||.+-.+.....   ............+      ...+
T Consensus       148 ----------~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~---~~~~~~~~~~~~p------l~R~  208 (243)
T d1q7ba_         148 ----------ANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRAL---SDDQRAGILAQVP------AGRL  208 (243)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS---CHHHHHHHHTTCT------TSSC
T ss_pred             ----------HHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhh---hhhHHHHHHhcCC------CCCC
Confidence                      679999999999999888764   89999999998865532211   1111222222221      3447


Q ss_pred             eeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          224 VHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      ..++|+|.++.+++....   .+..+.+.|.
T Consensus       209 ~~pedvA~~v~fL~S~~s~~itGq~i~vdGG  239 (243)
T d1q7ba_         209 GGAQEIANAVAFLASDEAAYITGETLHVNGG  239 (243)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence            889999999999997543   2445667554

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=3.8e-22  Score=162.21  Aligned_cols=220  Identities=13%  Similarity=0.042  Sum_probs=161.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||++.||+++++.|++.|++|++..|+.++..+...  .+...+.++.++++|++|+++++++++       ++
T Consensus        12 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~--~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~i   89 (255)
T d1fmca_          12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVD--EIQQLGGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHH--HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--HHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999999998765443222  122224578899999999988887664       68


Q ss_pred             CEEEEeccccccCC---CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCCCC
Q 039049           75 DGVFHTASPVLVPY---DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSD  148 (305)
Q Consensus        75 d~Vi~~a~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~  148 (305)
                      |++|||||......   +.+.+...+++|+.++..+.+.+...   .+-.++|++||.....+.+..             
T Consensus        90 DilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~-------------  156 (255)
T d1fmca_          90 DILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINM-------------  156 (255)
T ss_dssp             CEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTC-------------
T ss_pred             CEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhcccccc-------------
Confidence            99999999876543   45678889999999999998876432   144589999997754432221             


Q ss_pred             cccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcccee
Q 039049          149 PDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVH  225 (305)
Q Consensus       149 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  225 (305)
                              ..|+.+|...+.+.+.++.+.   |+++..+.||.+-.+.......  ...........+      ..-+..
T Consensus       157 --------~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~--~e~~~~~~~~~p------l~R~g~  220 (255)
T d1fmca_         157 --------TSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVIT--PEIEQKMLQHTP------IRRLGQ  220 (255)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCC--HHHHHHHHHTCS------SCSCBC
T ss_pred             --------ccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCC--HHHHHHHHhcCC------CCCCcC
Confidence                    679999999999999888764   7999999999987654222111  222333333322      334678


Q ss_pred             HHHHHHHHHHhhcccc---cCceEEEecCC
Q 039049          226 IDDVVGAHILAMEETR---ASGRLICSSSV  252 (305)
Q Consensus       226 v~D~a~~~~~~~~~~~---~~~~~~~~~~~  252 (305)
                      ++|+|.++.+++....   .+..+.+.|..
T Consensus       221 pedvA~~v~fL~S~~s~~itG~~i~vDGG~  250 (255)
T d1fmca_         221 PQDIANAALFLCSPAASWVSGQILTVSGGG  250 (255)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHHHHHHHHHhCchhcCCcCCEEEECcCc
Confidence            9999999999997543   34457776553

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.89  E-value=6.4e-22  Score=159.50  Aligned_cols=210  Identities=14%  Similarity=0.128  Sum_probs=156.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||++.||+++++.|++.|++|++.+|++++..+...  .+   ..++.++++|++|+++++++++       .+
T Consensus         7 K~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~--~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   81 (244)
T d1nffa_           7 KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAA--EL---ADAARYVHLDVTQPAQWKAAVDTAVTAFGGL   81 (244)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HT---GGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--Hh---hCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            789999999999999999999999999999998754332211  11   3468899999999998887764       68


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      |++|||||......    ..+.+...+++|+.++..+.+.+...   .+-.++|++||.....+.+..            
T Consensus        82 dilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~------------  149 (244)
T d1nffa_          82 HVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVAC------------  149 (244)
T ss_dssp             CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTB------------
T ss_pred             eEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccc------------
Confidence            99999999876543    45678889999999999999876322   144689999998754332221            


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccce
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFV  224 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  224 (305)
                               ..|+.+|...+.+.+.++.++   |+++..+.|+.+..+.......            .....  ....+.
T Consensus       150 ---------~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~------------~~~~~--pl~R~~  206 (244)
T d1nffa_         150 ---------HGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPE------------DIFQT--ALGRAA  206 (244)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCT------------TCSCC--SSSSCB
T ss_pred             ---------cchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhH------------HHHhc--cccCCC
Confidence                     669999999999999988774   7999999999987764321110            00001  134478


Q ss_pred             eHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          225 HIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       225 ~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      .++|+|.++.+++....   .+..+.+.|.
T Consensus       207 ~p~diA~~v~fL~s~~s~~itG~~i~vDGG  236 (244)
T d1nffa_         207 EPVEVSNLVVYLASDESSYSTGAEFVVDGG  236 (244)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CHHHHHHHHHHHhChhhCCCcCCEEEECCC
Confidence            99999999999996543   2445677543

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=3.3e-22  Score=161.32  Aligned_cols=216  Identities=17%  Similarity=0.155  Sum_probs=158.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc---CCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ---GVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~Vi   78 (305)
                      |++|||||++.||+++++.|++.|++|++..|+.++..+..      ....++..+.+|+.|+++++++++   ++|++|
T Consensus         6 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~------~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilV   79 (242)
T d1cyda_           6 LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLA------KECPGIEPVCVDLGDWDATEKALGGIGPVDLLV   79 (242)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH------HHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH------HhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEE
Confidence            78999999999999999999999999999999865433221      113368899999999999999887   579999


Q ss_pred             EeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcc
Q 039049           79 HTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKK----AKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPD  150 (305)
Q Consensus        79 ~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~  150 (305)
                      ||||......    +.+.+...+++|+.++..+.+.+..    ...-.++|++||.....+.+..               
T Consensus        80 nnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~---------------  144 (242)
T d1cyda_          80 NNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNL---------------  144 (242)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTB---------------
T ss_pred             ECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCcc---------------
Confidence            9999866543    5667888999999999999886532    2134589999998654332221               


Q ss_pred             cccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHH
Q 039049          151 YCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHID  227 (305)
Q Consensus       151 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  227 (305)
                            ..|+.+|...+.+.+.++.+.   |+++..+.|+.+-.+...... .............+      ...+..++
T Consensus       145 ------~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~-~~~~~~~~~~~~~p------l~R~~~pe  211 (242)
T d1cyda_         145 ------ITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVS-ADPEFARKLKERHP------LRKFAEVE  211 (242)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHT-CCHHHHHHHHHHST------TSSCBCHH
T ss_pred             ------ccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhc-CCHHHHHHHHhcCC------CCCCcCHH
Confidence                  669999999999999988764   799999999998765321111 11122233333222      34478899


Q ss_pred             HHHHHHHHhhcccc---cCceEEEecC
Q 039049          228 DVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       228 D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      |+|.++.+++....   .+..+.+.|.
T Consensus       212 eva~~v~fL~S~~s~~itG~~i~vDGG  238 (242)
T d1cyda_         212 DVVNSILFLLSDRSASTSGGGILVDAG  238 (242)
T ss_dssp             HHHHHHHHHHSGGGTTCCSSEEEESTT
T ss_pred             HHHHHHHHHhCchhcCcCCceEEeCcc
Confidence            99999999986543   2445677554

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.89  E-value=1.5e-21  Score=158.00  Aligned_cols=217  Identities=13%  Similarity=0.107  Sum_probs=152.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |.++||||++.||+++++.|++.|++|++.+|++.+... ..+   ...+.++.++++|++|+++++++++       ++
T Consensus         6 KvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~-~~~---~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~i   81 (247)
T d2ew8a1           6 KLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAE-AAI---RNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRC   81 (247)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHH-HHH---HHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHH-HHH---HHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            789999999999999999999999999999998653221 111   1224578999999999998888764       68


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |++|||||......    +.+.+...+++|+.++..+.+++.    +. +-.++|++||.....+.+..           
T Consensus        82 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~Iv~isS~~~~~~~~~~-----------  149 (247)
T d2ew8a1          82 DILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN-GWGRIINLTSTTYWLKIEAY-----------  149 (247)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGGSCCSSC-----------
T ss_pred             CEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhc-CCCCccccccchhcccCccc-----------
Confidence            99999999876543    456788999999999999998764    33 44689999998754332221           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                                ..|+.||...+.+.+.++.+.   |+++..+.||.+-.+........  .. ........    ....-+
T Consensus       150 ----------~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~--~~-~~~~~~~~----~~l~r~  212 (247)
T d2ew8a1         150 ----------THYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALS--AM-FDVLPNML----QAIPRL  212 (247)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC---------------------CTT----SSSCSC
T ss_pred             ----------ccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccc--hh-HHHHHHHh----ccCCCC
Confidence                      669999999999999888764   79999999999877643221100  00 00001110    112346


Q ss_pred             eeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          224 VHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      ..++|+|.++++++....   .+..+.+.|.
T Consensus       213 ~~pedvA~~v~fL~S~~s~~itG~~i~vDGG  243 (247)
T d2ew8a1         213 QVPLDLTGAAAFLASDDASFITGQTLAVDGG  243 (247)
T ss_dssp             CCTHHHHHHHHHHTSGGGTTCCSCEEEESSS
T ss_pred             CCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence            788999999999997543   2445667554

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.89  E-value=1.6e-21  Score=157.32  Aligned_cols=211  Identities=15%  Similarity=0.108  Sum_probs=154.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||++.||+++++.|+++|++|++.+|+.+...+..   .    .-++.++++|+.|+++++++++       ++
T Consensus         6 K~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~---~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   78 (242)
T d1ulsa_           6 KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAA---E----AVGAHPVVMDVADPASVERGFAEALAHLGRL   78 (242)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---H----TTTCEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH---H----HcCCeEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence            67999999999999999999999999999999865433221   1    1156889999999998887764       68


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      |++|||||......    ..+.+...+++|+.++..+.+++...   .+...++.+||... .+.+.             
T Consensus        79 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~-~~~~~-------------  144 (242)
T d1ulsa_          79 DGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVY-LGNLG-------------  144 (242)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGG-GCCTT-------------
T ss_pred             eEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccc-cCCCC-------------
Confidence            99999999876543    45678889999999999999886543   14456777777432 11111             


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccce
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFV  224 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  224 (305)
                              ...|+.+|...+.+.+.++.++   |+++..+.||.+-.+.....   ............+      ...+.
T Consensus       145 --------~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~---~~~~~~~~~~~~p------l~R~~  207 (242)
T d1ulsa_         145 --------QANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV---PEKVREKAIAATP------LGRAG  207 (242)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS---CHHHHHHHHHTCT------TCSCB
T ss_pred             --------CcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcC---CHHHHHHHHhcCC------CCCCC
Confidence                    1669999999999999888774   79999999999987654322   1222233333322      34467


Q ss_pred             eHHHHHHHHHHhhcccc---cCceEEEec
Q 039049          225 HIDDVVGAHILAMEETR---ASGRLICSS  250 (305)
Q Consensus       225 ~v~D~a~~~~~~~~~~~---~~~~~~~~~  250 (305)
                      .++|+|.++.+++....   .+..+.+.|
T Consensus       208 ~pedia~~v~fL~S~~s~~itG~~i~vDG  236 (242)
T d1ulsa_         208 KPLEVAYAALFLLSDESSFITGQVLFVDG  236 (242)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CHHHHHHHHHHHhchhhCCCCCcEEEECC
Confidence            89999999999997543   244566654

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.89  E-value=1.4e-21  Score=159.15  Aligned_cols=221  Identities=15%  Similarity=0.107  Sum_probs=158.6

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--------
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--------   72 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--------   72 (305)
                      .|++|||||++.||+++++.|+++|++|++.+|+++..++....  .......+.++.+|+.+.++++++++        
T Consensus         6 gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~--~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g   83 (258)
T d1ae1a_           6 GTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEI--WREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   83 (258)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH--HHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH--HHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            37899999999999999999999999999999987654433222  22234478889999999988777653        


Q ss_pred             CCCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           73 GVDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      .+|++||+|+......    ..+.+...+++|+.++..+.+++...   .+..++|++||.....+.+..          
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~----------  153 (258)
T d1ae1a_          84 KLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSV----------  153 (258)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTC----------
T ss_pred             CcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccc----------
Confidence            3799999999877543    46678889999999999998876422   155699999998764432221          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCc---hHHHHHHHHhcCCCCCCCC
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTS---TLLLILAMVKGLRGEYPNT  219 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~---~~~~~~~~~~~~~~~~~~~  219 (305)
                                 ..|+.+|...+.+.+.++.++   ++++..+.||.+..+........   ....+.......+      
T Consensus       154 -----------~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~p------  216 (258)
T d1ae1a_         154 -----------SLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTP------  216 (258)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHST------
T ss_pred             -----------hhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCC------
Confidence                       679999999999999988774   79999999999987754322111   1223334333322      


Q ss_pred             CccceeHHHHHHHHHHhhcccc--cCc-eEEEec
Q 039049          220 TVGFVHIDDVVGAHILAMEETR--ASG-RLICSS  250 (305)
Q Consensus       220 ~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~  250 (305)
                      ...+...+|+|.++.+++....  ..| .+.+.|
T Consensus       217 lgR~~~pediA~~v~fL~S~~s~~itG~~i~vDG  250 (258)
T d1ae1a_         217 MGRAGKPQEVSALIAFLCFPAASYITGQIIWADG  250 (258)
T ss_dssp             TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCCcCHHHHHHHHHHHhChhhCCCcCcEEEeCC
Confidence            3447899999999999996543  244 455644

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.88  E-value=1.4e-21  Score=159.38  Aligned_cols=221  Identities=16%  Similarity=0.182  Sum_probs=159.7

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      .|+++||||++.||+++++.|++.|++|++.+|+.+...+...  .+...+.++..+++|++|+++++++++       .
T Consensus         5 gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~--~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (260)
T d1zema1           5 GKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEA--SVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK   82 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--HHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            3789999999999999999999999999999998765443322  222334578999999999988887764       6


Q ss_pred             CCEEEEecccccc-C----CCCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLV-P----YDNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|++||+||.... .    ...+.+...+++|+.++..+.+++...   .+-.++|++||.....+.+..          
T Consensus        83 iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~----------  152 (260)
T d1zema1          83 IDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNM----------  152 (260)
T ss_dssp             CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTB----------
T ss_pred             CCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcch----------
Confidence            8999999997643 2    146678889999999999999886432   145699999998765433221          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCC-------------CCCCCchHHHHHHHH
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLL-------------APQPTSTLLLILAMV  209 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~-------------~~~~~~~~~~~~~~~  209 (305)
                                 ..|+.+|...+.+.+.++.++   |+++..+.||.|-.+..             .............+.
T Consensus       153 -----------~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (260)
T d1zema1         153 -----------AAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMI  221 (260)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHH
T ss_pred             -----------HHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHH
Confidence                       669999999999999988775   79999999999876521             111111112222333


Q ss_pred             hcCCCCCCCCCccceeHHHHHHHHHHhhcccc---cCceEEEec
Q 039049          210 KGLRGEYPNTTVGFVHIDDVVGAHILAMEETR---ASGRLICSS  250 (305)
Q Consensus       210 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~  250 (305)
                      ...+      ..-+..++|+|.++.+++....   .+..+.+.|
T Consensus       222 ~~~P------l~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDG  259 (260)
T d1zema1         222 GSVP------MRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAG  259 (260)
T ss_dssp             HTST------TSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESC
T ss_pred             hcCC------CCCCcCHHHHHHHHHHHhCchhcCccCCeEEeCC
Confidence            2222      3446789999999999997543   234466543

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.88  E-value=1.7e-21  Score=157.99  Aligned_cols=213  Identities=15%  Similarity=0.143  Sum_probs=155.5

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      .|+++||||++.||+++++.|+++|++|++.+|+.++..+..   .  ....++.++++|++++++++++++       +
T Consensus         5 gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~---~--~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (254)
T d1hdca_           5 GKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATA---R--ELGDAARYQHLDVTIEEDWQRVVAYAREEFGS   79 (254)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---H--TTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH---H--HhCCceEEEEcccCCHHHHHHHHHHHHHHcCC
Confidence            378999999999999999999999999999999875433221   1  123478999999999998888764       6


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|++|||||......    ..+.+...+++|+.++..+.+++.    +. +-.++|++||.....+.+..          
T Consensus        80 iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~-~~G~II~isS~~~~~~~~~~----------  148 (254)
T d1hdca_          80 VDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA-GGGSIVNISSAAGLMGLALT----------  148 (254)
T ss_dssp             CCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCTTC----------
T ss_pred             ccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhc-CCCeecccccchhcccccch----------
Confidence            899999999876543    456788899999999999998874    33 45699999998754433221          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCC-CCCC-C
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGE-YPNT-T  220 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~  220 (305)
                                 ..|+.||...+.+.+.++.++   ++++..+.|+.+..+.           ........... .... .
T Consensus       149 -----------~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~-----------~~~~~~~~~~~~~~~~pl  206 (254)
T d1hdca_         149 -----------SSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM-----------TAETGIRQGEGNYPNTPM  206 (254)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH-----------HHHHTCCCSTTSCTTSTT
T ss_pred             -----------hhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCcc-----------chhcCHHHHHHHHhCCCC
Confidence                       679999999999999988764   7999999999986542           11111111100 1111 1


Q ss_pred             ccc-eeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          221 VGF-VHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       221 ~~~-i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      .-+ ..++|+|.++++++....   .+..+.+.|.
T Consensus       207 ~R~g~~PedvA~~v~fL~S~~a~~itG~~i~vDGG  241 (254)
T d1hdca_         207 GRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGG  241 (254)
T ss_dssp             SSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCCCHHHHHHHHHHHhchhhCCCCCceEEeCCC
Confidence            122 468999999999997543   2445777543

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.88  E-value=3.5e-22  Score=163.24  Aligned_cols=220  Identities=15%  Similarity=0.124  Sum_probs=154.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCc-ccchh-hhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPED-LSKVG-FLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~-~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      |++|||||++.||+++++.|+++|++|++..|+... .++.. .+...  ...++.++++|++|+++++++++       
T Consensus         5 K~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~--~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   82 (260)
T d1x1ta1           5 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQ--HGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHH--HTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHh--cCCcEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            679999999999999999999999999999997532 22211 11111  13478899999999998888774       


Q ss_pred             CCCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCC
Q 039049           73 GVDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNES  144 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~  144 (305)
                      ++|++|||||......    +.+.+...+++|+.++..+.+++.    +. +-.++|++||.....+.+..         
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~G~Iv~isS~~~~~~~~~~---------  152 (260)
T d1x1ta1          83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ-GFGRIINIASAHGLVASANK---------  152 (260)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCTTC---------
T ss_pred             CCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhc-CCceEeecccccceeccCCc---------
Confidence            6899999999876543    566788899999999998887763    33 44699999998764433221         


Q ss_pred             CCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchH--------HHHHH-HHhcC
Q 039049          145 HWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTL--------LLILA-MVKGL  212 (305)
Q Consensus       145 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~--------~~~~~-~~~~~  212 (305)
                                  ..|+.||...+.+.+.++.+.   |+++..+.||.+-.+..........        ..... .....
T Consensus       153 ------------~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (260)
T d1x1ta1         153 ------------SAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQ  220 (260)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHC
T ss_pred             ------------chhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcC
Confidence                        669999999999999988774   7999999999987664322111000        00000 00011


Q ss_pred             CCCCCCCCccceeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          213 RGEYPNTTVGFVHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       213 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      +      ..-+..++|+|.++++++.....   +..+.+.|.
T Consensus       221 P------l~R~g~pediA~~v~fL~S~~a~~itG~~i~vDGG  256 (260)
T d1x1ta1         221 P------SLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGG  256 (260)
T ss_dssp             T------TCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             C------CCCCcCHHHHHHHHHHHhChhhCCCcCCEEEECcc
Confidence            1      34478899999999999975432   345666544

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.88  E-value=9.8e-22  Score=160.27  Aligned_cols=221  Identities=19%  Similarity=0.133  Sum_probs=160.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |.+|||||++.||+++++.|+++|++|++.+|+.+...+...  .+...+.++.++++|++|+++++++++       ++
T Consensus         3 KValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~--~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   80 (257)
T d2rhca1           3 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLK--ELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV   80 (257)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--HHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            567999999999999999999999999999998765443222  122234578999999999998888764       58


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc-----CCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA-----KSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      |++|||||......    +.+.+...+++|+.++..+.+++...     .+..++|++||.....+.+..          
T Consensus        81 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~----------  150 (257)
T d2rhca1          81 DVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHA----------  150 (257)
T ss_dssp             SEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTC----------
T ss_pred             CEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccc----------
Confidence            99999999876543    46678889999999999999987432     155689999998754433221          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCC--------CCCchHHHHHHHHhcCCC
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAP--------QPTSTLLLILAMVKGLRG  214 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~--------~~~~~~~~~~~~~~~~~~  214 (305)
                                 ..|+.+|...+.+.+.++.++   |+++..+.||.+-.+....        ................+ 
T Consensus       151 -----------~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~P-  218 (257)
T d2rhca1         151 -----------APYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVP-  218 (257)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTST-
T ss_pred             -----------hhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCC-
Confidence                       669999999999999998885   6999999999986542100        00011112222222222 


Q ss_pred             CCCCCCccceeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          215 EYPNTTVGFVHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       215 ~~~~~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                           ..-+..++|+|.++++++.....   +..+.+.|.
T Consensus       219 -----lgR~~~pedia~~v~fL~S~~s~~itG~~i~vDGG  253 (257)
T d2rhca1         219 -----IGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG  253 (257)
T ss_dssp             -----TSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             -----CCCCcCHHHHHHHHHHHhCchhcCCcCceEEECcC
Confidence                 34478899999999999965432   445666554

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.88  E-value=3e-21  Score=158.37  Aligned_cols=223  Identities=17%  Similarity=0.167  Sum_probs=159.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |.+|||||++.||+++++.|++.|++|++.+|+.+..++...   ......++.++++|+.|+++++++++       ++
T Consensus         7 KvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~---~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (268)
T d2bgka1           7 KVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCN---NIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL   83 (268)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---HhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence            789999999999999999999999999999998654433221   11223468889999999998888764       68


Q ss_pred             CEEEEeccccccCC------CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           75 DGVFHTASPVLVPY------DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        75 d~Vi~~a~~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      |++|||||......      ..+.+...+++|+.++..+.+++...   .+-.++|++||...+......          
T Consensus        84 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~----------  153 (268)
T d2bgka1          84 DIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGV----------  153 (268)
T ss_dssp             CEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTS----------
T ss_pred             ceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccccccccc----------
Confidence            99999999754321      34567888999999999999886432   144689999987654332110          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                                ...|+.+|...+.+.+.++.++   |+++..+.||.+-.+.......................    ...
T Consensus       154 ----------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~----~gr  219 (268)
T d2bgka1         154 ----------SHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANL----KGT  219 (268)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSS----CSC
T ss_pred             ----------ccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhcccc----CCC
Confidence                      0469999999999999988764   89999999999988765433222222222222211111    234


Q ss_pred             ceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          223 FVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      +..++|+|.++++++....   .+..+.+.|.
T Consensus       220 ~~~pedvA~~v~fL~S~~s~~itGq~i~VDGG  251 (268)
T d2bgka1         220 LLRAEDVADAVAYLAGDESKYVSGLNLVIDGG  251 (268)
T ss_dssp             CCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHhChhhCCccCceEEECcC
Confidence            6789999999999997543   2445777543

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.88  E-value=1.1e-21  Score=159.14  Aligned_cols=221  Identities=16%  Similarity=0.095  Sum_probs=158.8

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchh-hhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVG-FLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      .|+++||||++.||+++++.|++.|++|++.+|+.++..+.. .+...  .+.++.++++|+.|+++++++++       
T Consensus         5 gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~--~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   82 (251)
T d1vl8a_           5 GRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEK--YGVETMAFRCDVSNYEEVKKLLEAVKEKFG   82 (251)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--HCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHH--hCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            378999999999999999999999999999999876543322 22121  13468889999999988887764       


Q ss_pred             CCCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeee-ccCCCCCCcccCCC
Q 039049           73 GVDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIR-YRHDAQQVSPLNES  144 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~-~~~~~~~~~~~~E~  144 (305)
                      ++|++|||||......    ..+.+...+++|+.++..+.+.+...   .+-.++|++||..... +.+..         
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~---------  153 (251)
T d1vl8a_          83 KLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNI---------  153 (251)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSC---------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccc---------
Confidence            6899999999765543    56678889999999999999886432   1456999999865322 11110         


Q ss_pred             CCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCc
Q 039049          145 HWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTV  221 (305)
Q Consensus       145 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (305)
                                  ..|+.+|...+.+.+.++.+.   |+++..+.||.+-.+........ ...........+      ..
T Consensus       154 ------------~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~-~~~~~~~~~~~p------l~  214 (251)
T d1vl8a_         154 ------------SAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSD-PEKLDYMLKRIP------LG  214 (251)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTC-HHHHHHHHHTCT------TS
T ss_pred             ------------cchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCC-HHHHHHHHhcCC------CC
Confidence                        669999999999999888764   79999999999976643211111 122233333322      33


Q ss_pred             cceeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          222 GFVHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      .+..++|+|+++++++.....   +..+.+.|.
T Consensus       215 R~~~pedvA~~v~fL~S~~a~~itG~~i~vDGG  247 (251)
T d1vl8a_         215 RTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGG  247 (251)
T ss_dssp             SCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCHHHHHHHHHHHhCchhCCCcCcEEEeCcC
Confidence            467899999999999875432   445666543

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.88  E-value=1.1e-21  Score=159.84  Aligned_cols=221  Identities=14%  Similarity=0.060  Sum_probs=156.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||++.||+++++.|++.|++|++..|+.++..+. ..........++.++++|++|+++++++++       ++
T Consensus         8 K~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~-~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i   86 (261)
T d1geea_           8 KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANS-VLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKL   86 (261)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHH-HHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHH-HHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            6899999999999999999999999999999986532211 111112224478899999999988887764       68


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKK----AKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |++|||||...+..    +.+.+...+++|+.++..+.+++..    .+...++|++||.....+.+..           
T Consensus        87 DiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~-----------  155 (261)
T d1geea_          87 DVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLF-----------  155 (261)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTC-----------
T ss_pred             CEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccc-----------
Confidence            99999999876543    4667888999999999998887633    3233468999997653332211           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                                ..|+.+|...+.+.+.++.++   |+++..+.|+.+..+...... .............+      ..-+
T Consensus       156 ----------~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~-~~~~~~~~~~~~~p------l~R~  218 (261)
T d1geea_         156 ----------VHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKF-ADPEQRADVESMIP------MGYI  218 (261)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHH-HSHHHHHHHHTTCT------TSSC
T ss_pred             ----------cccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhc-CCHHHHHHHHhcCC------CCCC
Confidence                      669999999999999888774   799999999999766421100 00111122221111      3346


Q ss_pred             eeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          224 VHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      ..++|+|.++++++....   .+..+.+.|.
T Consensus       219 ~~pediA~~v~fL~S~~s~~itG~~i~vDGG  249 (261)
T d1geea_         219 GEPEEIAAVAAWLASSEASYVTGITLFADGG  249 (261)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence            789999999999997543   2445677543

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.88  E-value=1.1e-21  Score=159.86  Aligned_cols=221  Identities=13%  Similarity=0.072  Sum_probs=159.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--------~   73 (305)
                      |+++||||++.||+++++.|++.|++|++.+|+.++..+..  ..+.....++.++++|++|+++++++++        .
T Consensus         9 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~--~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~   86 (259)
T d2ae2a_           9 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCL--TQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   86 (259)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--HHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCC
Confidence            68999999999999999999999999999999866544322  2222234578899999999888776653        4


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      +|++|||||......    +.+.+...+++|+.++..+.+++...   .+-.++|++||.....+.+..           
T Consensus        87 idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~-----------  155 (259)
T d2ae2a_          87 LNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYE-----------  155 (259)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTC-----------
T ss_pred             ceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccc-----------
Confidence            799999999876543    45678889999999999988876432   145689999998753332211           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCc--hHHHHHHHHhcCCCCCCCCCc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTS--TLLLILAMVKGLRGEYPNTTV  221 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  221 (305)
                                ..|+.+|...+.+.+.++.++   ++++..+.|+.+-.+........  ....+.......+      ..
T Consensus       156 ----------~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~p------l~  219 (259)
T d2ae2a_         156 ----------AVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCA------LR  219 (259)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTST------TC
T ss_pred             ----------cchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCC------CC
Confidence                      679999999999999998774   79999999999876532111111  1122333333322      33


Q ss_pred             cceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          222 GFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      -+..++|+|.++++++....   .+..+.+.|.
T Consensus       220 R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  252 (259)
T d2ae2a_         220 RMGEPKELAAMVAFLCFPAASYVTGQIIYVDGG  252 (259)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCcCHHHHHHHHHHHhCchhCCCcCcEEEECCC
Confidence            47789999999999997543   2445666544

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.2e-21  Score=158.68  Aligned_cols=217  Identities=18%  Similarity=0.130  Sum_probs=156.1

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      .|+++||||++.||+++++.|++.|++|++.+|+.+...+..      ...+++.++++|++|+++++++++       +
T Consensus         6 GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~------~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~   79 (250)
T d1ydea1           6 GKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALE------QELPGAVFILCDVTQEDDVKTLVSETIRRFGR   79 (250)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH------HHCTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH------HhcCCCeEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            378999999999999999999999999999999865433221      113367899999999998888764       6


Q ss_pred             CCEEEEeccccccCC-----CCchhhhhhhhhHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           74 VDGVFHTASPVLVPY-----DNNIQATLIDPCIKGTLNVLSSCKKA--KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      +|++|||||......     +.+.+...+++|+.++.++.+++...  .+-.++|++||.....+.+..           
T Consensus        80 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~~~~-----------  148 (250)
T d1ydea1          80 LDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQA-----------  148 (250)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTC-----------
T ss_pred             CCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccccccCc-----------
Confidence            899999999654321     44568889999999999999876432  122589999998764433221           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCC---CCCCchHHHHHHHHhcCCCCCCCCC
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLA---PQPTSTLLLILAMVKGLRGEYPNTT  220 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  220 (305)
                                ..|+.+|...+.+.+.++.++   ++++..+.||.|-.+...   .........+.......+      .
T Consensus       149 ----------~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~p------l  212 (250)
T d1ydea1         149 ----------VPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQP------L  212 (250)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTST------T
T ss_pred             ----------chhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCC------C
Confidence                      679999999999999988764   799999999998654211   001111223333333322      3


Q ss_pred             ccceeHHHHHHHHHHhhcccc--cCceEEEec
Q 039049          221 VGFVHIDDVVGAHILAMEETR--ASGRLICSS  250 (305)
Q Consensus       221 ~~~i~v~D~a~~~~~~~~~~~--~~~~~~~~~  250 (305)
                      .-+..++|+|.++.+++....  ++..+.+.|
T Consensus       213 ~R~g~p~eva~~v~fL~Sda~~itG~~i~vDG  244 (250)
T d1ydea1         213 GRMGQPAEVGAAAVFLASEANFCTGIELLVTG  244 (250)
T ss_dssp             SSCBCHHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred             CCCCCHHHHHHHHHHHhCccCCCcCCeEEECC
Confidence            457899999999999986321  233466654

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.88  E-value=1.1e-21  Score=159.77  Aligned_cols=221  Identities=16%  Similarity=0.117  Sum_probs=155.8

Q ss_pred             Cc-EEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PE-YCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~-ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      || ++||||++.||+++++.|+++|++|++.+|++++..+....  +...+.++.++++|++|++++.++++       +
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~--i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   78 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASE--INQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGG   78 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH--HHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH--HHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence            45 59999999999999999999999999999987654433221  12224578899999999998887764       6


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|++|||||......    +.+.+...+++|+.++.++.+++.    +.+...++|++||.....+.+..          
T Consensus        79 iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~----------  148 (255)
T d1gega_          79 FDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPEL----------  148 (255)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTB----------
T ss_pred             ccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCccc----------
Confidence            899999999876543    456788899999999999988753    22234579999997754332221          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCC--------CchHHHHHHHHhcCCC
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQP--------TSTLLLILAMVKGLRG  214 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~--------~~~~~~~~~~~~~~~~  214 (305)
                                 ..|+.+|...+.+.+.++.+.   |+++..+.||.+-.+......        ..............+ 
T Consensus       149 -----------~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-  216 (255)
T d1gega_         149 -----------AVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRIT-  216 (255)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCT-
T ss_pred             -----------ccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCC-
Confidence                       669999999999999888664   899999999988654210000        000000111111111 


Q ss_pred             CCCCCCccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          215 EYPNTTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       215 ~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                           ...+..++|+|.++++++....   .+..+.+.|.
T Consensus       217 -----l~R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG  251 (255)
T d1gega_         217 -----LGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGG  251 (255)
T ss_dssp             -----TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             -----CCCCcCHHHHHHHHHHHhCchhCCccCcEEEecCC
Confidence                 3447889999999999997543   2445666544

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.88  E-value=1.3e-21  Score=159.22  Aligned_cols=218  Identities=13%  Similarity=0.093  Sum_probs=156.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||++.||+++++.|+++|++|++.+|+.+...+..  ...   +.++.++++|++|+++++++++       .+
T Consensus         6 K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~--~~~---~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i   80 (256)
T d1k2wa_           6 KTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATA--AEI---GPAACAIALDVTDQASIDRCVAELLDRWGSI   80 (256)
T ss_dssp             EEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHH--HHH---CTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--HHh---CCceEEEEeeCCCHHHHHHHHHHHHHHhCCc
Confidence            67999999999999999999999999999999865433221  111   3478899999999998888764       68


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKK----AKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |++||+||......    ..+.+...+++|+.++..+.+++..    .....++|++||.....+.+..           
T Consensus        81 DilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~-----------  149 (256)
T d1k2wa_          81 DILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALV-----------  149 (256)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTC-----------
T ss_pred             cEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccc-----------
Confidence            99999999876543    4567888999999999999886432    2134689999998754332221           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCC--------chHHHHHHHHhcCCCC
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPT--------STLLLILAMVKGLRGE  215 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~--------~~~~~~~~~~~~~~~~  215 (305)
                                ..|+.+|...+.+.+.++.++   |+++..+.||.+-.+.......        .............+  
T Consensus       150 ----------~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P--  217 (256)
T d1k2wa_         150 ----------GVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVP--  217 (256)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHST--
T ss_pred             ----------cchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCC--
Confidence                      679999999999999888764   7999999999887664210000        00001111111111  


Q ss_pred             CCCCCccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          216 YPNTTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       216 ~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                          ..-+...+|+|.++.+++....   .+..+.+.|.
T Consensus       218 ----lgR~~~p~evA~~v~fL~S~~a~~iTG~~i~vDGG  252 (256)
T d1k2wa_         218 ----FGRMGRAEDLTGMAIFLATPEADYIVAQTYNVDGG  252 (256)
T ss_dssp             ----TSSCBCHHHHHHHHHHTTSGGGTTCCSCEEEESTT
T ss_pred             ----CCCCcCHHHHHHHHHHHhCchhCCccCceEEECcc
Confidence                3447889999999999986543   2445777543

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.87  E-value=1.5e-21  Score=158.38  Aligned_cols=218  Identities=15%  Similarity=0.145  Sum_probs=155.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||++.||+++++.|++.|++|++..|+.+...+....   .....++.++++|+.|++++.++++       ++
T Consensus         7 K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   83 (251)
T d1zk4a1           7 KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKS---VGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---HCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH---hCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCc
Confidence            7899999999999999999999999999999986544332221   1224478999999999998887764       68


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCc-cEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSV-KRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~-~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |++||||+......    ..+.+...+++|+.++..+.+++...   .+. .++|++||.....+.+..           
T Consensus        84 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~-----------  152 (251)
T d1zk4a1          84 STLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSL-----------  152 (251)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTC-----------
T ss_pred             eEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCc-----------
Confidence            99999999876543    45667889999999999999886432   132 489999997653332211           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHH-----cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKD-----CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTV  221 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (305)
                                ..|+.+|...+.+.+.++.+     +|+++..+.||.+-.+........  ....    ......|  ..
T Consensus       153 ----------~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~--~~~~----~~~~~~p--l~  214 (251)
T d1zk4a1         153 ----------GAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGA--EEAM----SQRTKTP--MG  214 (251)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTH--HHHH----TSTTTCT--TS
T ss_pred             ----------hhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCH--HHHH----HHHhCCC--CC
Confidence                      66999999999988877643     479999999999876532211111  0111    1111111  33


Q ss_pred             cceeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          222 GFVHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      -+..++|+|.++.+++.....   +..+.+.|.
T Consensus       215 R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG  247 (251)
T d1zk4a1         215 HIGEPNDIAYICVYLASNESKFATGSEFVVDGG  247 (251)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCcCHHHHHHHHHHHhCchhCCCcCcEEEECcc
Confidence            478999999999999875432   345666543

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.87  E-value=3.3e-21  Score=155.21  Aligned_cols=198  Identities=12%  Similarity=0.119  Sum_probs=150.4

Q ss_pred             EEEeCCcchHHHHHHHHHHHcCCe-------EEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc----
Q 039049            4 YCVTGGTGFIAAHLVKALLDKGHM-------VRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ----   72 (305)
Q Consensus         4 ilItG~~G~iG~~l~~~l~~~g~~-------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----   72 (305)
                      ||||||++.||+++++.|++.|++       |+..+|+.++..+....  ....+.++.++++|++|+++++++++    
T Consensus         4 vlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~--~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           4 LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLE--CRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHH--HHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             EEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHH--HHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            799999999999999999999987       88888887654433221  22234578899999999998887764    


Q ss_pred             ---CCCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccC
Q 039049           73 ---GVDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLN  142 (305)
Q Consensus        73 ---~~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~  142 (305)
                         ++|++||||+......    ..+.+...+++|+.++..+.+++...   .+-.++|++||.....+.+..       
T Consensus        82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~-------  154 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHS-------  154 (240)
T ss_dssp             HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC-------
T ss_pred             HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCC-------
Confidence               5899999999876543    46678889999999999988887432   144689999998764433221       


Q ss_pred             CCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCC
Q 039049          143 ESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD---CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNT  219 (305)
Q Consensus       143 E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (305)
                                    ..|+.||...+.+.+.++.+   +|+++..+.||.+-.+.......                  ..
T Consensus       155 --------------~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~------------------~~  202 (240)
T d2bd0a1         155 --------------SIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD------------------EM  202 (240)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS------------------TT
T ss_pred             --------------hHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCH------------------hh
Confidence                          67999999999999888766   47999999999997664321110                  01


Q ss_pred             CccceeHHHHHHHHHHhhccccc
Q 039049          220 TVGFVHIDDVVGAHILAMEETRA  242 (305)
Q Consensus       220 ~~~~i~v~D~a~~~~~~~~~~~~  242 (305)
                      ...+...+|+|+++++++..+..
T Consensus       203 ~~~~~~PedvA~~v~~l~s~~~~  225 (240)
T d2bd0a1         203 QALMMMPEDIAAPVVQAYLQPSR  225 (240)
T ss_dssp             GGGSBCHHHHHHHHHHHHTSCTT
T ss_pred             HhcCCCHHHHHHHHHHHHcCCcc
Confidence            23456789999999999987543

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.87  E-value=9.4e-21  Score=153.81  Aligned_cols=215  Identities=12%  Similarity=0.073  Sum_probs=156.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCC-CcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLL-MEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-d~~~~~~~~~-------~   73 (305)
                      |+||||||++.||..++++|+++|.+|+++.|+.++......+... ....++.++.+|+. +.++++++++       +
T Consensus         6 K~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~   84 (254)
T d1sbya1           6 KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAI-NPKVNITFHTYDVTVPVAESKKLLKKIFDQLKT   84 (254)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHH-CTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhh-CCCCCEEEEEeecCCCHHHHHHHHHHHHHHcCC
Confidence            7899999999999999999999999999999988765444333222 22447889999997 5455655543       6


Q ss_pred             CCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhc------CCccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           74 VDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKA------KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      +|++|||||...    .+.++..+++|+.++.++.+++...      +...++|++||...+.+.+..            
T Consensus        85 iDilvnnAG~~~----~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~------------  148 (254)
T d1sbya1          85 VDILINGAGILD----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQV------------  148 (254)
T ss_dssp             CCEEEECCCCCC----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTS------------
T ss_pred             CCEEEeCCCCCC----HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCC------------
Confidence            899999999765    5677889999999999999877442      123579999998765443221            


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCc--hHHHHHHHHhcCCCCCCCCCcc
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTS--TLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                               ..|+.||.....+.+.++.++   ++++..+.||.|..+........  ....+.....         .+.
T Consensus       149 ---------~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~---------~~~  210 (254)
T d1sbya1         149 ---------PVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLL---------SHP  210 (254)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHT---------TSC
T ss_pred             ---------HHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhccc---------cCC
Confidence                     669999999999988887664   89999999999987521110000  0001111111         234


Q ss_pred             ceeHHHHHHHHHHhhcccccCceEEEecC
Q 039049          223 FVHIDDVVGAHILAMEETRASGRLICSSS  251 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~~~~~~~~~~~  251 (305)
                      ....+++|++++.+++....+..+.+.+.
T Consensus       211 ~~~~e~va~~~~~~~~~~~tG~vi~vdgG  239 (254)
T d1sbya1         211 TQTSEQCGQNFVKAIEANKNGAIWKLDLG  239 (254)
T ss_dssp             CEEHHHHHHHHHHHHHHCCTTCEEEEETT
T ss_pred             CCCHHHHHHHHHHhhhCCCCCCEEEECCC
Confidence            56899999999999987766667777653

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.87  E-value=2.8e-21  Score=157.36  Aligned_cols=218  Identities=13%  Similarity=0.119  Sum_probs=142.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--------~   73 (305)
                      |+++||||++.||+++++.|++.|++|++.+|+.++..+...  .......++..+.+|++++++++++++        .
T Consensus         9 K~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~--~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   86 (259)
T d1xq1a_           9 KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLS--KWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   86 (259)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--HHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--HHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence            789999999999999999999999999999998765443222  122224478999999999888776653        4


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      +|++|||||......    ..+.+...+++|+.++..+.+.+...   .+..++|++||.....+.+..           
T Consensus        87 idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~-----------  155 (259)
T d1xq1a_          87 LDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVG-----------  155 (259)
T ss_dssp             CSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------C-----------
T ss_pred             cccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccccccc-----------
Confidence            799999999876543    45678889999999999999876432   145699999998754432221           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                                ..|+.+|...+.+.+.++.+.   |+++..+.||.+-.+........  ..........+      ...+
T Consensus       156 ----------~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~--~~~~~~~~~~p------l~R~  217 (259)
T d1xq1a_         156 ----------SIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDD--EFKKVVISRKP------LGRF  217 (259)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC---------------------------------
T ss_pred             ----------ccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchH--HHHHHHHhCCC------CCCC
Confidence                      569999999999999888774   89999999999976643221110  01111111111      3346


Q ss_pred             eeHHHHHHHHHHhhcccc---cCceEEEec
Q 039049          224 VHIDDVVGAHILAMEETR---ASGRLICSS  250 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~---~~~~~~~~~  250 (305)
                      ..++|+|.++++++....   ++..+.+.|
T Consensus       218 ~~pedvA~~v~fL~S~~s~~iTG~~i~vDG  247 (259)
T d1xq1a_         218 GEPEEVSSLVAFLCMPAASYITGQTICVDG  247 (259)
T ss_dssp             CCGGGGHHHHHHHTSGGGTTCCSCEEECCC
T ss_pred             cCHHHHHHHHHHHhCchhcCCcCcEEEeCC
Confidence            789999999999986533   233455543

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=3.2e-21  Score=156.93  Aligned_cols=212  Identities=15%  Similarity=0.106  Sum_probs=149.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |.+|||||++.||+++++.|+++|++|++..|+.++.++............++.++++|+.+++++.++++       ++
T Consensus        11 Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g~i   90 (257)
T d1xg5a_          11 RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGV   90 (257)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            57999999999999999999999999999999876544433222222223478899999999998887664       68


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcC-CccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAK-SVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      |++||||+......    +.+.+...+++|+.+...+.+++.    +.+ +-.++|++||.+.....+..          
T Consensus        91 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~----------  160 (257)
T d1xg5a_          91 DICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLS----------  160 (257)
T ss_dssp             SEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCG----------
T ss_pred             CEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCc----------
Confidence            99999999876543    466788899999999998877763    221 23689999998743221110          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHH-----cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCC
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD-----CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTT  220 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (305)
                          .     ...|+.+|...+.+.+.++.+     +++++..+.|+.+-.+.............   ....+      .
T Consensus       161 ----~-----~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~---~~~~~------~  222 (257)
T d1xg5a_         161 ----V-----THFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKA---AATYE------Q  222 (257)
T ss_dssp             ----G-----GHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHH---HHHHC-------
T ss_pred             ----c-----cHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHH---HhcCC------C
Confidence                0     055999999999999888754     47999999998775442111001111111   11111      3


Q ss_pred             ccceeHHHHHHHHHHhhcccc
Q 039049          221 VGFVHIDDVVGAHILAMEETR  241 (305)
Q Consensus       221 ~~~i~v~D~a~~~~~~~~~~~  241 (305)
                      ..++..+|+|.++++++..+.
T Consensus       223 ~r~~~pedvA~~v~fL~s~~a  243 (257)
T d1xg5a_         223 MKCLKPEDVAEAVIYVLSTPA  243 (257)
T ss_dssp             --CBCHHHHHHHHHHHHHSCT
T ss_pred             CCCcCHHHHHHHHHHHhCChh
Confidence            446889999999999997754

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=4.9e-22  Score=161.72  Aligned_cols=224  Identities=13%  Similarity=0.078  Sum_probs=153.0

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      .|++|||||++.||+++++.|+++|++|++.+|+.++..+............++.++++|++|+++++++++       +
T Consensus         3 GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   82 (254)
T d2gdza1           3 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGR   82 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            478999999999999999999999999999999876544332211111224478899999999988887764       6


Q ss_pred             CCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhc----C--CccEEEEeccceeeeccCCCCCCcccCCCCCC
Q 039049           74 VDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKA----K--SVKRVVLTSSCSSIRYRHDAQQVSPLNESHWS  147 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~--~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  147 (305)
                      +|++||+|+...    .++++..+++|+.++.++.+.+...    +  ...++|++||.....+.+..            
T Consensus        83 iDilVnnAg~~~----~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~------------  146 (254)
T d2gdza1          83 LDILVNNAGVNN----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQ------------  146 (254)
T ss_dssp             CCEEEECCCCCC----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTC------------
T ss_pred             cCeecccccccc----cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCc------------
Confidence            899999999876    3467778999999888887776432    1  12479999998754433221            


Q ss_pred             CcccccccchhHHHHHHHHHHHHHH--HHH---HcCCcEEEEecCceecCCCCCCCCc-----hHHHHHHHHhcCCCCCC
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWR--IAK---DCGIDMVVVNPSFVVGPLLAPQPTS-----TLLLILAMVKGLRGEYP  217 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~--~~~---~~~~~~~i~Rp~~v~G~~~~~~~~~-----~~~~~~~~~~~~~~~~~  217 (305)
                               ..|+.||...+.+.+.  ++.   .+|+++..+.||.+-.+........     .......+....+    
T Consensus       147 ---------~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p----  213 (254)
T d2gdza1         147 ---------PVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIK----  213 (254)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHH----
T ss_pred             ---------cchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCC----
Confidence                     6699999999988774  232   3589999999999865421110000     0000001110000    


Q ss_pred             CCCccceeHHHHHHHHHHhhcccccCc-eEEEe-cCCcCH
Q 039049          218 NTTVGFVHIDDVVGAHILAMEETRASG-RLICS-SSVAHW  255 (305)
Q Consensus       218 ~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~-~~~~s~  255 (305)
                        ...+...+|+|++++++++.+...| .+.+. |..+.+
T Consensus       214 --~~r~~~pedvA~~v~fL~s~~~itG~~i~VdGG~~~~~  251 (254)
T d2gdza1         214 --YYGILDPPLIANGLITLIEDDALNGAIMKITTSKGIHF  251 (254)
T ss_dssp             --HHCCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEE
T ss_pred             --CCCCcCHHHHHHHHHHHHcCCCCCCCEEEECCCCeeec
Confidence              2235788999999999998765444 56675 344433

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.86  E-value=3.1e-21  Score=155.77  Aligned_cols=217  Identities=16%  Similarity=0.119  Sum_probs=154.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCC-CcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDP-EDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      +-||||||++.||+++++.|++.|++|++..++. +..++....  ....+.++.++++|+.|+++++++++       +
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~--~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQ--IEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH--HHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH--HHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            4589999999999999999999999998876543 322222211  11223478899999999998887764       6


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      +|++||||+......    +.+.++..+++|+.++..+.+++...   .+-.++|++||.....+.+..           
T Consensus        80 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~-----------  148 (244)
T d1edoa_          80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQ-----------  148 (244)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTC-----------
T ss_pred             CCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCC-----------
Confidence            899999999876543    56678889999999999998887432   144699999998765443221           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                                ..|+.+|...+.+.+.++.++   |+++..+.||.+-.+.....   ............+      ..-+
T Consensus       149 ----------~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~---~~~~~~~~~~~~p------l~R~  209 (244)
T d1edoa_         149 ----------ANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL---GEDMEKKILGTIP------LGRT  209 (244)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT---CHHHHHHHHTSCT------TCSC
T ss_pred             ----------HHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHh---hHHHHHHHHhcCC------CCCC
Confidence                      669999999999999988774   89999999999865532211   1122222222222      3447


Q ss_pred             eeHHHHHHHHHHhhcccc----cCceEEEec
Q 039049          224 VHIDDVVGAHILAMEETR----ASGRLICSS  250 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~----~~~~~~~~~  250 (305)
                      ..++|+|.++.+++..+.    .+..+.+.|
T Consensus       210 ~~p~dvA~~v~fLa~S~~a~~itG~~i~vdG  240 (244)
T d1edoa_         210 GQPENVAGLVEFLALSPAASYITGQAFTIDG  240 (244)
T ss_dssp             BCHHHHHHHHHHHHHCSGGGGCCSCEEEEST
T ss_pred             cCHHHHHHHHHHHHCCchhcCCcCCeEEeCC
Confidence            789999999999864332    234456644

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.86  E-value=2.3e-20  Score=152.60  Aligned_cols=223  Identities=14%  Similarity=0.161  Sum_probs=149.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhh-hhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGF-LWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |.++||||++.||++++++|+++|++|++.+|+.++..+... +........++.++++|++|.++++++++       +
T Consensus         6 KvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~   85 (264)
T d1spxa_           6 KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGK   85 (264)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            679999999999999999999999999999998765443322 22222223468999999999998887764       6


Q ss_pred             CCEEEEeccccccCC--------CCchhhhhhhhhHHHHHHHHHHHHhc--CCccEEEEeccce-eeeccCCCCCCcccC
Q 039049           74 VDGVFHTASPVLVPY--------DNNIQATLIDPCIKGTLNVLSSCKKA--KSVKRVVLTSSCS-SIRYRHDAQQVSPLN  142 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~-~~~~~~~~~~~~~~~  142 (305)
                      +|++|||||...+..        +.+.++..+++|+.++..+.+++...  ++-.++|.++|.. ...+.+..       
T Consensus        86 iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~~~~-------  158 (264)
T d1spxa_          86 LDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDF-------  158 (264)
T ss_dssp             CCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTTS-------
T ss_pred             CCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccccCCCc-------
Confidence            899999999754321        34567889999999999998887432  1223566555543 22222111       


Q ss_pred             CCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCC------CchHHHHHHHHhcCC
Q 039049          143 ESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQP------TSTLLLILAMVKGLR  213 (305)
Q Consensus       143 E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~------~~~~~~~~~~~~~~~  213 (305)
                                    ..|+.+|...+.+.+.++.++   |+++..+.||.|-.+......      ..............+
T Consensus       159 --------------~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~P  224 (264)
T d1spxa_         159 --------------PYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVP  224 (264)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCT
T ss_pred             --------------hhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCC
Confidence                          669999999999999888764   899999999999766432211      011111222222212


Q ss_pred             CCCCCCCccceeHHHHHHHHHHhhcccc----cCceEEEecC
Q 039049          214 GEYPNTTVGFVHIDDVVGAHILAMEETR----ASGRLICSSS  251 (305)
Q Consensus       214 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~----~~~~~~~~~~  251 (305)
                            ..-+...+|+|.++.+++..+.    .+..+.+.|.
T Consensus       225 ------l~R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG  260 (264)
T d1spxa_         225 ------AGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGG  260 (264)
T ss_dssp             ------TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred             ------CCCCcCHHHHHHHHHHHhCCcccCCccCceEEeCCC
Confidence                  3347789999999999997432    3445666543

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=9e-21  Score=157.27  Aligned_cols=222  Identities=13%  Similarity=0.106  Sum_probs=156.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchh-hhhhc--cCccCceEEEEccCCCcchHHHHhc------
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVG-FLWEL--NGAEERLKIMKADLLMEGSFDEAIQ------   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~--~~~~~~~~~~~~D~~d~~~~~~~~~------   72 (305)
                      |+++||||++.||+++++.|++.|++|++..|+.++..+.. .+...  .....++.++++|++|++++.++++      
T Consensus        13 KvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~   92 (297)
T d1yxma1          13 QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTF   92 (297)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHHHHh
Confidence            78999999999999999999999999999999876544322 22211  1224578899999999998887764      


Q ss_pred             -CCCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCCC
Q 039049           73 -GVDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNES  144 (305)
Q Consensus        73 -~~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~  144 (305)
                       ++|++||||+......    ..+.+...+++|+.++..+.+++...   .+..++|++||... ...+.          
T Consensus        93 G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~-~~~~~----------  161 (297)
T d1yxma1          93 GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTK-AGFPL----------  161 (297)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCT-TCCTT----------
T ss_pred             CCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccccc-ccccc----------
Confidence             6899999999766543    45678889999999999998887432   13457888776432 11111          


Q ss_pred             CCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCch-HHHHHHHHhcCCCCCCCCC
Q 039049          145 HWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTST-LLLILAMVKGLRGEYPNTT  220 (305)
Q Consensus       145 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  220 (305)
                                 ...|+.+|...+.+.+.++.++   |+++..+.||.|..+......... ...........    |  .
T Consensus       162 -----------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~----p--l  224 (297)
T d1yxma1         162 -----------AVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKI----P--A  224 (297)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGS----T--T
T ss_pred             -----------cccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcC----C--C
Confidence                       1669999999999999998775   799999999999776432211110 00111111111    1  3


Q ss_pred             ccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          221 VGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       221 ~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      .-+...+|+|.++++++....   .+..+.+.|.
T Consensus       225 gR~g~pedvA~~v~fL~Sd~s~~iTG~~i~VDGG  258 (297)
T d1yxma1         225 KRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGG  258 (297)
T ss_dssp             SSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCcCHHHHHHHHHHHhCchhcCcCCcEEEeCcC
Confidence            346789999999999997543   2445667554

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.85  E-value=2.7e-20  Score=149.44  Aligned_cols=209  Identities=13%  Similarity=0.105  Sum_probs=149.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCc-chHHHHhcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME-GSFDEAIQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~~~d~Vi~~   80 (305)
                      |++|||||++.||+++++.|++.|++|++.+|+.+...+.           ..+++.+|+++. +.+.+.+.++|++|||
T Consensus         5 K~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~-----------~~~~~~~Dv~~~~~~~~~~~g~iD~lVnn   73 (234)
T d1o5ia_           5 KGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS-----------GHRYVVCDLRKDLDLLFEKVKEVDILVLN   73 (234)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT-----------CSEEEECCTTTCHHHHHHHSCCCSEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc-----------CCcEEEcchHHHHHHHHHHhCCCcEEEec
Confidence            7899999999999999999999999999999986432211           346788999763 3444555689999999


Q ss_pred             ccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccc
Q 039049           81 ASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYC  152 (305)
Q Consensus        81 a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~  152 (305)
                      ||......    +.+.+...+++|+.++..+.+++.    +. +..++|++||.....+.+..                 
T Consensus        74 AG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-~~G~ii~i~S~~~~~~~~~~-----------------  135 (234)
T d1o5ia_          74 AGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK-GWGRIVAITSFSVISPIENL-----------------  135 (234)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCTTB-----------------
T ss_pred             ccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccc-cccccccccccccccccccc-----------------
Confidence            99765532    456678889999999988888763    33 44689999997644332211                 


Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHH
Q 039049          153 KHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDV  229 (305)
Q Consensus       153 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  229 (305)
                          ..|+.+|...+.+.+.++.++   |+++..+.||.+-.+.......  ...........+      ...+...+|+
T Consensus       136 ----~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~--~~~~~~~~~~~p------l~R~~~pedi  203 (234)
T d1o5ia_         136 ----YTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLS--EEKKKQVESQIP------MRRMAKPEEI  203 (234)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSC--HHHHHHHHTTST------TSSCBCHHHH
T ss_pred             ----ccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcC--HHHHHHHHhcCC------CCCCcCHHHH
Confidence                669999999999998888764   7999999999887654211111  111122222211      3457889999


Q ss_pred             HHHHHHhhccccc---CceEEEecC
Q 039049          230 VGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       230 a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      |.++.+++.....   +..+.+.|.
T Consensus       204 A~~v~fL~S~~s~~itG~~i~vDGG  228 (234)
T d1o5ia_         204 ASVVAFLCSEKASYLTGQTIVVDGG  228 (234)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHhChhhcCCcCcEEEECcc
Confidence            9999999865432   445666543

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.85  E-value=5.5e-20  Score=150.02  Aligned_cols=222  Identities=15%  Similarity=0.075  Sum_probs=154.8

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcc-cchhhhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDL-SKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      .|++|||||++.||+++++.|++.|++|++..|+.++. +.....  ....+.++..+.+|+.|+++++++++       
T Consensus         6 GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~--~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g   83 (259)
T d1ja9a_           6 GKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAE--LKKLGAQGVAIQADISKPSEVVALFDKAVSHFG   83 (259)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH--HHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHH--HHHcCCCceEecCCCCCHHHHHHHHHHHHHHcC
Confidence            37899999999999999999999999999877665432 222211  22234578999999999888887664       


Q ss_pred             CCCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhcC-CccEEEEecccee-eeccCCCCCCcccCCCCC
Q 039049           73 GVDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKAK-SVKRVVLTSSCSS-IRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~-~~~~~~~~~~~~~~E~~~  146 (305)
                      .+|++||+||......    ..+.++..+++|+.+..++++.+...- .-++++.++|... ..+.+.            
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~~~------------  151 (259)
T d1ja9a_          84 GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPN------------  151 (259)
T ss_dssp             CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCS------------
T ss_pred             CCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCCCC------------
Confidence            6799999999876543    456778899999999999998876531 2235666655432 211111            


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCC---------CCCCCc-hHHHHHHHHhcCC
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLL---------APQPTS-TLLLILAMVKGLR  213 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~---------~~~~~~-~~~~~~~~~~~~~  213 (305)
                               ...|+.+|...+.+.+.++.++   |+++..+.||.+-.+..         ...... ...+........+
T Consensus       152 ---------~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  222 (259)
T d1ja9a_         152 ---------HALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNP  222 (259)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTST
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCC
Confidence                     0669999999999999988764   89999999999864310         011111 1222233333332


Q ss_pred             CCCCCCCccceeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          214 GEYPNTTVGFVHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       214 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                            ...+...+|+++++.+++.....   +..+.+.|.
T Consensus       223 ------l~R~g~p~eVa~~v~fL~S~~a~~itG~~i~vDGG  257 (259)
T d1ja9a_         223 ------LKRIGYPADIGRAVSALCQEESEWINGQVIKLTGG  257 (259)
T ss_dssp             ------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ------CCCCcCHHHHHHHHHHHhCchhcCCcCceEEeCCC
Confidence                  44578999999999999986552   445666654

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.85  E-value=2.6e-20  Score=153.03  Aligned_cols=227  Identities=13%  Similarity=0.152  Sum_probs=156.5

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhh-hhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGF-LWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      .|+++||||++.||+++++.|++.|++|++.+|+.++.++... +...-....++..+.+|++|+++++++++       
T Consensus         4 gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   83 (274)
T d1xhla_           4 GKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFG   83 (274)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            3789999999999999999999999999999998765443322 22222223478999999999988887764       


Q ss_pred             CCCEEEEeccccccCC------CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCCCcccCC
Q 039049           73 GVDGVFHTASPVLVPY------DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSIRYRHDAQQVSPLNE  143 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E  143 (305)
                      .+|++|||||......      +.+.+...+++|+.++..+.+++...   .+..+++++||.....+.+..        
T Consensus        84 ~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~--------  155 (274)
T d1xhla_          84 KIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGY--------  155 (274)
T ss_dssp             CCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTS--------
T ss_pred             CceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCC--------
Confidence            6899999999754321      23457889999999999998887432   244578888876533222111        


Q ss_pred             CCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCC-c-hHHHHHHHHhcCCCCCCC
Q 039049          144 SHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPT-S-TLLLILAMVKGLRGEYPN  218 (305)
Q Consensus       144 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~-~-~~~~~~~~~~~~~~~~~~  218 (305)
                                   ..|+.+|...+.+.+.++.++   |+++..+.||.+-.+....... . ................| 
T Consensus       156 -------------~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iP-  221 (274)
T d1xhla_         156 -------------PYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIP-  221 (274)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCT-
T ss_pred             -------------ceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCC-
Confidence                         669999999999998888764   8999999999997653211111 1 11112222222111112 


Q ss_pred             CCccceeHHHHHHHHHHhhccc----ccCceEEEec
Q 039049          219 TTVGFVHIDDVVGAHILAMEET----RASGRLICSS  250 (305)
Q Consensus       219 ~~~~~i~v~D~a~~~~~~~~~~----~~~~~~~~~~  250 (305)
                       ..-+..++|+|.++++++..+    -.+..+.+.|
T Consensus       222 -lgR~g~pediA~~v~fL~S~d~s~~itG~~i~vDG  256 (274)
T d1xhla_         222 -VGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADG  256 (274)
T ss_dssp             -TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEEST
T ss_pred             -CCCCcCHHHHHHHHHHHcCCccccCccCcEEEeCc
Confidence             334678999999999999642    1344577754

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=5.1e-21  Score=154.18  Aligned_cols=197  Identities=11%  Similarity=0.035  Sum_probs=148.9

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      .|.++||||++.||+++++.|++.|++|++.+|+.++..+.....  ...+.++..+.+|++|++.++++++       .
T Consensus         7 Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~--~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~   84 (244)
T d1yb1a_           7 GEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKC--KGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD   84 (244)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--HHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH--HhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            378999999999999999999999999999999876544332221  2234578999999999998887664       5


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|++|||||......    ..+.+...+++|+.++.++.+.+.    +. +-.++|++||.....+.+..          
T Consensus        85 idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~G~Iv~isS~~~~~~~~~~----------  153 (244)
T d1yb1a_          85 VSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN-NHGHIVTVASAAGHVSVPFL----------  153 (244)
T ss_dssp             CSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCCC-CCCHHHH----------
T ss_pred             CceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhc-CCceEEEeecchhcCCCCCc----------
Confidence            899999999887654    244567889999999999988763    33 55689999998865443221          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHH------cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCC
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD------CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNT  219 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~------~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (305)
                                 ..|+.||.+.+.+.+.++.+      .|++++.+.||.|-.+....    ..   .   .         
T Consensus       154 -----------~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~----~~---~---~---------  203 (244)
T d1yb1a_         154 -----------LAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN----PS---T---S---------  203 (244)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC----TH---H---H---------
T ss_pred             -----------HHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhC----cC---c---c---------
Confidence                       66999999999999888765      37999999999886653221    00   0   0         


Q ss_pred             CccceeHHHHHHHHHHhhccc
Q 039049          220 TVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       220 ~~~~i~v~D~a~~~~~~~~~~  240 (305)
                      ....+..+|+|+.+...+...
T Consensus       204 ~~~~~~pe~va~~i~~~~~~~  224 (244)
T d1yb1a_         204 LGPTLEPEEVVNRLMHGILTE  224 (244)
T ss_dssp             HCCCCCHHHHHHHHHHHHHTT
T ss_pred             ccCCCCHHHHHHHHHHHHhcC
Confidence            123457899999999887764

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.85  E-value=3.4e-20  Score=152.21  Aligned_cols=227  Identities=16%  Similarity=0.182  Sum_probs=152.4

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhh-hhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGF-LWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      .|+++||||++.||+++++.|++.|++|++..|+.++.++... +........++.++++|++|+++++++++       
T Consensus         5 gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g   84 (272)
T d1xkqa_           5 NKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFG   84 (272)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            3789999999999999999999999999999998765443322 22221223468999999999998887764       


Q ss_pred             CCCEEEEeccccccCC--------CCchhhhhhhhhHHHHHHHHHHHHhc--CCccEEEEecc-ceeeeccCCCCCCccc
Q 039049           73 GVDGVFHTASPVLVPY--------DNNIQATLIDPCIKGTLNVLSSCKKA--KSVKRVVLTSS-CSSIRYRHDAQQVSPL  141 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS-~~~~~~~~~~~~~~~~  141 (305)
                      ++|++|||||...+..        ..+.+...+++|+.++..+.+++...  .+-..+|.++| .+...+.+..      
T Consensus        85 ~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~~------  158 (272)
T d1xkqa_          85 KIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDF------  158 (272)
T ss_dssp             CCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSS------
T ss_pred             CceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCCc------
Confidence            6899999999876432        12246778899999999998886432  01134555554 4322222111      


Q ss_pred             CCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCch--HHHHHHHHhcCCCCC
Q 039049          142 NESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTST--LLLILAMVKGLRGEY  216 (305)
Q Consensus       142 ~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~--~~~~~~~~~~~~~~~  216 (305)
                                     ..|+.+|...+.+.+.++.++   |+++..+.||.|-.+.........  ...............
T Consensus       159 ---------------~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (272)
T d1xkqa_         159 ---------------LYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECI  223 (272)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTC
T ss_pred             ---------------chhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCC
Confidence                           669999999999999888664   899999999998765322111111  111111111111111


Q ss_pred             CCCCccceeHHHHHHHHHHhhccc----ccCceEEEec
Q 039049          217 PNTTVGFVHIDDVVGAHILAMEET----RASGRLICSS  250 (305)
Q Consensus       217 ~~~~~~~i~v~D~a~~~~~~~~~~----~~~~~~~~~~  250 (305)
                      |  ..-+..++|+|+++++++..+    -.+..+.+.|
T Consensus       224 P--lgR~g~pediA~~v~fL~S~~as~~iTG~~i~vDG  259 (272)
T d1xkqa_         224 P--IGAAGKPEHIANIILFLADRNLSFYILGQSIVADG  259 (272)
T ss_dssp             T--TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEEST
T ss_pred             C--CCCCcCHHHHHHHHHHHhCcchhCCccCeEEEeCc
Confidence            1  334788999999999998643    2344566654

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.85  E-value=1.8e-20  Score=151.07  Aligned_cols=215  Identities=16%  Similarity=0.123  Sum_probs=155.4

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      .|+++||||++.||+++++.|+++|++|++..|+.++..+.   ..  ....++.++++|++++++++++++       +
T Consensus         5 gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~--~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~   79 (241)
T d2a4ka1           5 GKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEA---VA--ALEAEAIAVVADVSDPKAVEAVFAEALEEFGR   79 (241)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---HH--TCCSSEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH---HH--HcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            37899999999999999999999999999999987643321   11  223478899999999998887664       6


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCCCcccCCCCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKAK-SVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSD  148 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~  148 (305)
                      +|++||||+......    ..+.+...+++|+.++..+.+++.... .-+.++.+||.+.... +               
T Consensus        80 iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~-~---------------  143 (241)
T d2a4ka1          80 LHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGA-F---------------  143 (241)
T ss_dssp             CCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCH-H---------------
T ss_pred             ccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccccc-c---------------
Confidence            899999999876543    466778899999999999999876542 2234555555432111 0               


Q ss_pred             cccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcccee
Q 039049          149 PDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVH  225 (305)
Q Consensus       149 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  225 (305)
                       .     ...|+.+|.+.|.+.+.++.++   ++++..+.||.+-.+....   ..........+..+      ...+..
T Consensus       144 -~-----~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~---~~~~~~~~~~~~~p------~~r~~~  208 (241)
T d2a4ka1         144 -G-----LAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAG---LPPWAWEQEVGASP------LGRAGR  208 (241)
T ss_dssp             -H-----HHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTT---SCHHHHHHHHHTST------TCSCBC
T ss_pred             -C-----ccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHh---hhHhHHHHHHhCCC------CCCCcC
Confidence             0     1569999999999999998885   6999999999996654321   11223333333322      344778


Q ss_pred             HHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          226 IDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       226 v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      ++|+|+++.+++....   .+..+.+.|.
T Consensus       209 p~dva~~v~fL~S~~s~~itG~~i~vDGG  237 (241)
T d2a4ka1         209 PEEVAQAALFLLSEESAYITGQALYVDGG  237 (241)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHHhcchhCCCcCceEEeCCC
Confidence            9999999999997543   2445666543

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.85  E-value=6e-20  Score=149.65  Aligned_cols=218  Identities=12%  Similarity=0.044  Sum_probs=150.3

Q ss_pred             CcEEEeCCcc--hHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            2 PEYCVTGGTG--FIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~~G--~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      |+++||||+|  .||++++++|++.|++|++..|+...........   ....+..++++|+.|+++++++++       
T Consensus         9 K~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (256)
T d1ulua_           9 KKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLA---EALGGALLFRADVTQDEELDALFAGVKEAFG   85 (256)
T ss_dssp             CEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHH---HHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhh---hccCcccccccccCCHHHHHHHHHHHHHhcC
Confidence            6899999998  7999999999999999988888754332222221   223367789999999988887764       


Q ss_pred             CCCEEEEeccccccC--------CCCchhhhhhhhhHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCCCcccCC
Q 039049           73 GVDGVFHTASPVLVP--------YDNNIQATLIDPCIKGTLNVLSSCKKAK-SVKRVVLTSSCSSIRYRHDAQQVSPLNE  143 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~E  143 (305)
                      ++|++||+|+.....        .+.+.+...+++|+.++..+.+.+...- .-.++|++||.....+.+..        
T Consensus        86 ~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~~~--------  157 (256)
T d1ulua_          86 GLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKY--------  157 (256)
T ss_dssp             SEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTC--------
T ss_pred             CceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCCCc--------
Confidence            689999999875321        1344566788999999999998875431 22579999997754432221        


Q ss_pred             CCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCC
Q 039049          144 SHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTT  220 (305)
Q Consensus       144 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (305)
                                   ..|+.+|...+.+.+.++.++   |+++..+.|+.+..+....... .........+..+      .
T Consensus       158 -------------~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~-~~~~~~~~~~~~p------l  217 (256)
T d1ulua_         158 -------------NVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPG-FTKMYDRVAQTAP------L  217 (256)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------CHHHHHHHHHHST------T
T ss_pred             -------------hHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhh-hHHHHHHHHhcCC------C
Confidence                         679999999999999988774   7999999999988765432211 1222333333322      3


Q ss_pred             ccceeHHHHHHHHHHhhccccc---CceEEEec
Q 039049          221 VGFVHIDDVVGAHILAMEETRA---SGRLICSS  250 (305)
Q Consensus       221 ~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~  250 (305)
                      .-+..++|+|.++.+++.....   +..+.+.|
T Consensus       218 ~R~~~pedvA~~v~fL~S~~s~~itG~~i~VDG  250 (256)
T d1ulua_         218 RRNITQEEVGNLGLFLLSPLASGITGEVVYVDA  250 (256)
T ss_dssp             SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCcCHHHHHHHHHHHhCchhCCccCCeEEECc
Confidence            3467899999999999975442   34466654

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.84  E-value=2.8e-20  Score=151.02  Aligned_cols=213  Identities=10%  Similarity=0.005  Sum_probs=152.7

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CCC
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GVD   75 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d   75 (305)
                      +++||||++.||+.+++.|++.|++|++..|+.+...+.....        ..+.++|+.+.++++++++       ++|
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~--------~~~~~~dv~~~~~~~~~~~~~~~~~G~iD   73 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFA--------ETYPQLKPMSEQEPAELIEAVTSAYGQVD   73 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHH--------HHCTTSEECCCCSHHHHHHHHHHHHSCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhh--------CcEEEeccCCHHHHHHHHHHHHHHcCCCC
Confidence            6899999999999999999999999999999876544433221        1344678888877776654       689


Q ss_pred             EEEEecccccc-CC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           76 GVFHTASPVLV-PY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        76 ~Vi~~a~~~~~-~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      ++|||||.... ..    ..+.+...+++|+.++..+.+++.    +. +-.++|++||.....+.+..           
T Consensus        74 iLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~-~~G~IV~isS~~~~~~~~~~-----------  141 (252)
T d1zmta1          74 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKR-KSGHIIFITSATPFGPWKEL-----------  141 (252)
T ss_dssp             EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCSTTTSCCTTC-----------
T ss_pred             EEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhccc-ccceeecccccccccccccc-----------
Confidence            99999986543 21    345678889999999998888763    33 44689999998754432221           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCc-----hHHHHHHHHhcCCCCCCC
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTS-----TLLLILAMVKGLRGEYPN  218 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~-----~~~~~~~~~~~~~~~~~~  218 (305)
                                ..|+.+|...+.+.+.++.++   ++++..+.|+.+-.+........     .........+..+     
T Consensus       142 ----------~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~p-----  206 (252)
T d1zmta1         142 ----------STYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTA-----  206 (252)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSS-----
T ss_pred             ----------cccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCC-----
Confidence                      669999999999999988774   79999999999987754322111     1122233333222     


Q ss_pred             CCccceeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          219 TTVGFVHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       219 ~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                       ..-+...+|+|.++.+++.....   +..+.+.|.
T Consensus       207 -l~R~g~pedvA~~v~fL~S~~s~~iTG~~i~vdGG  241 (252)
T d1zmta1         207 -LQRLGTQKELGELVAFLASGSCDYLTGQVFWLAGG  241 (252)
T ss_dssp             -SSSCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTT
T ss_pred             -CCCCcCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence             23478899999999999975432   445667543

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.84  E-value=9.6e-21  Score=153.66  Aligned_cols=220  Identities=15%  Similarity=0.099  Sum_probs=153.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||++.||+++++.|++.|++|++.+|+.+...+..   ..  ...+..++++|+.|.++++++++       .+
T Consensus         7 K~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~---~~--~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   81 (253)
T d1hxha_           7 KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLA---AE--LGERSMFVRHDVSSEADWTLVMAAVQRRLGTL   81 (253)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH---HH--HCTTEEEECCCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH---HH--hCCCeEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            68999999999999999999999999999999765433221   11  13467889999999888887764       67


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCCCcccCCCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA--KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSD  148 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~  148 (305)
                      |++|||||......    +.+.+...+++|+.++..+.+++...  ..-.++|++||.....+.+..             
T Consensus        82 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~~~~-------------  148 (253)
T d1hxha_          82 NVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQY-------------  148 (253)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTTB-------------
T ss_pred             CeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCcccc-------------
Confidence            99999999876542    45678889999999999988886442  123689999998754332221             


Q ss_pred             cccccccchhHHHHHHHHHHHHHHHHHHc-----CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          149 PDYCKHYNLWYAYAKTIAEKEAWRIAKDC-----GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       149 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                              ..|+.+|...+.+.+.++.+.     ++++..+.||.+..+.........  .............+  ...+
T Consensus       149 --------~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~--~~~~~~~~~~~~~~--~gr~  216 (253)
T d1hxha_         149 --------AGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKG--VSKEMVLHDPKLNR--AGRA  216 (253)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTT--CCHHHHBCBTTTBT--TCCE
T ss_pred             --------ccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcch--hhHHHHHhCccccc--cCCC
Confidence                    669999999999988776543     599999999998765211000000  00111111111001  2347


Q ss_pred             eeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          224 VHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      ..++|+|+++++++....   .+..+++.|.
T Consensus       217 ~~pedvA~~v~fL~S~~s~~itG~~i~VDGG  247 (253)
T d1hxha_         217 YMPERIAQLVLFLASDESSVMSGSELHADNS  247 (253)
T ss_dssp             ECHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             CCHHHHHHHHHHHhChhhCCCcCcEEEECcc
Confidence            889999999999997543   2445777554

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.84  E-value=7.2e-20  Score=149.32  Aligned_cols=225  Identities=19%  Similarity=0.207  Sum_probs=156.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchh-hhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVG-FLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |++|||||++.||+++++.|++.|++|++..|+.++..+.. .+...  .+.++.++++|++|+++++++++       .
T Consensus        10 K~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~--~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   87 (260)
T d1h5qa_          10 KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKE--FGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   87 (260)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHH--HTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHH--hCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            68999999999999999999999999999999987654322 12111  13478899999999998888774       5


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKK----AKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|++||||+......    +.+.+...+++|+.++..+.+++..    ..+..+++..||.........       .-..
T Consensus        88 iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~-------~~~~  160 (260)
T d1h5qa_          88 ISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS-------SLNG  160 (260)
T ss_dssp             EEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE-------ETTE
T ss_pred             CcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccccc-------cccc
Confidence            799999999865543    4567888999999999988877533    224456676666543221100       0000


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                        .+     ....|+.+|...+.+.+.++.++   |+++..+.||.+-.+.....   ............+      ..-
T Consensus       161 --~~-----~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~---~~~~~~~~~~~~p------l~R  224 (260)
T d1h5qa_         161 --SL-----TQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM---DKKIRDHQASNIP------LNR  224 (260)
T ss_dssp             --EC-----SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS---CHHHHHHHHHTCT------TSS
T ss_pred             --Cc-----cccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhcc---CHHHHHHHHhcCC------CCC
Confidence              00     01569999999999999888764   79999999999976643221   1222333333322      334


Q ss_pred             ceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          223 FVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      +..++|+|.++.+++....   .+..+.+.|.
T Consensus       225 ~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  256 (260)
T d1h5qa_         225 FAQPEEMTGQAILLLSDHATYMTGGEYFIDGG  256 (260)
T ss_dssp             CBCGGGGHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred             CcCHHHHHHHHHHHhcchhCCCcCceEEECCC
Confidence            7889999999999987543   2445666554

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.83  E-value=2.8e-19  Score=148.69  Aligned_cols=221  Identities=13%  Similarity=0.079  Sum_probs=151.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchh-hhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVG-FLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |+++||||+|.||++++++|++.|++|++.+|+..+..+.. .+...  ...++..+++|+.+.+.+.++++       +
T Consensus        26 K~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~--~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  103 (294)
T d1w6ua_          26 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQ--TGNKVHAIQCDVRDPDMVQNTVSELIKVAGH  103 (294)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--HSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHh--cCCceEEEEecccChHHHHHHhhhhhhhccc
Confidence            78999999999999999999999999999999876543322 22222  13468899999999988877653       6


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                      +|++||+|+......    ..+.+...+.+|......+...+.    .......++.+||.......+..          
T Consensus       104 iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~----------  173 (294)
T d1w6ua_         104 PNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFV----------  173 (294)
T ss_dssp             CSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTC----------
T ss_pred             cchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhccccc----------
Confidence            899999999876543    234566677888887777665532    22244567777776543332211          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCcc
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVG  222 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (305)
                                 ..|+.+|...+.+.+.++.++   |+++..+.||.+-.+....................+      ..-
T Consensus       174 -----------~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~p------l~R  236 (294)
T d1w6ua_         174 -----------VPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIP------CGR  236 (294)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCT------TSS
T ss_pred             -----------chHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCC------CCC
Confidence                       669999999999999888764   799999999999877543322222222233333222      344


Q ss_pred             ceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          223 FVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       223 ~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      +..++|+|.++.+++....   .+..+.+.|+
T Consensus       237 ~~~pediA~~v~fL~sd~s~~itG~~i~vDGG  268 (294)
T d1w6ua_         237 LGTVEELANLAAFLCSDYASWINGAVIKFDGG  268 (294)
T ss_dssp             CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CCCHHHHHHHHHHHhCchhcCCCCcEEEECCC
Confidence            6789999999999997543   2445666543

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.83  E-value=1.3e-19  Score=148.01  Aligned_cols=208  Identities=19%  Similarity=0.126  Sum_probs=151.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhh-hhhccCccCceEEEEccCCCcchHHHHhc------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGF-LWELNGAEERLKIMKADLLMEGSFDEAIQ------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------~   73 (305)
                      .+||||||+|.||++++++|+++|+ +|++++|+..+.+.... ...+...+.++.++.+|+.|.+++.++++      .
T Consensus        10 gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~~   89 (259)
T d2fr1a1          10 GTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVP   89 (259)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccccc
Confidence            4799999999999999999999998 58888887544333222 22223334579999999999999988875      3


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcccCCCCCCCc
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDP  149 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~  149 (305)
                      +|.|||+++......    ..+.....+++|+.++.++.+.+... +..+||++||.....+.+..              
T Consensus        90 i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~-~~~~iv~~SS~a~~~g~~~~--------------  154 (259)
T d2fr1a1          90 LSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-DLTAFVLFSSFASAFGAPGL--------------  154 (259)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-CCSEEEEEEEHHHHTCCTTC--------------
T ss_pred             ccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhcc-CCceEeeecchhhccCCccc--------------
Confidence            689999999887653    34456778899999999999888776 77899999998866554332              


Q ss_pred             ccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHH
Q 039049          150 DYCKHYNLWYAYAKTIAEKEAWRIAKDCGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDV  229 (305)
Q Consensus       150 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  229 (305)
                             ..|+.+|...+.+.+.+. ..|++++.+.|+.+.+++....          .....   +...-...+..+++
T Consensus       155 -------~~YaAaka~l~~la~~~~-~~Gi~v~~I~pg~~~~~g~~~~----------~~~~~---~~~~G~~~~~~~~~  213 (259)
T d2fr1a1         155 -------GGYAPGNAYLDGLAQQRR-SDGLPATAVAWGTWAGSGMAEG----------PVADR---FRRHGVIEMPPETA  213 (259)
T ss_dssp             -------TTTHHHHHHHHHHHHHHH-HTTCCCEEEEECCBC-------------------------CTTTTEECBCHHHH
T ss_pred             -------HHHHHHHHhHHHHHHHHH-hCCCCEEECCCCcccCCccccc----------hHHHH---HHhcCCCCCCHHHH
Confidence                   559999999998887764 5689999999998877642111          00010   00112345789999


Q ss_pred             HHHHHHhhcccccCce
Q 039049          230 VGAHILAMEETRASGR  245 (305)
Q Consensus       230 a~~~~~~~~~~~~~~~  245 (305)
                      ++++..++.++.....
T Consensus       214 ~~~l~~~l~~~~~~~~  229 (259)
T d2fr1a1         214 CRALQNALDRAEVCPI  229 (259)
T ss_dssp             HHHHHHHHHTTCSSCE
T ss_pred             HHHHHHHHhCCCceEE
Confidence            9999999988665433

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=2.7e-19  Score=144.43  Aligned_cols=215  Identities=14%  Similarity=0.103  Sum_probs=154.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc---CCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ---GVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~Vi   78 (305)
                      |++|||||++.||+++++.|++.|++|++.+|++++..+..   .    ..++....+|+.+.+.++...+   ++|++|
T Consensus         7 K~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~---~----~~~~~~~~~d~~~~~~~~~~~~~~~~id~lV   79 (245)
T d2ag5a1           7 KVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE---K----YPGIQTRVLDVTKKKQIDQFANEVERLDVLF   79 (245)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG---G----STTEEEEECCTTCHHHHHHHHHHCSCCSEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---h----ccCCceeeeeccccccccccccccccceeEE
Confidence            67999999999999999999999999999999865433221   1    2367888899988766666553   789999


Q ss_pred             EeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc---CCccEEEEeccceee-eccCCCCCCcccCCCCCCCcc
Q 039049           79 HTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA---KSVKRVVLTSSCSSI-RYRHDAQQVSPLNESHWSDPD  150 (305)
Q Consensus        79 ~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~-~~~~~~~~~~~~~E~~~~~~~  150 (305)
                      |+||......    +.+.+...+++|+.++..+.+.+...   .+..++|++||.... .+..               . 
T Consensus        80 n~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~---------------~-  143 (245)
T d2ag5a1          80 NVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVV---------------N-  143 (245)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCT---------------T-
T ss_pred             ecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCcc---------------c-
Confidence            9999877643    45678889999999999998876432   144689999986531 1111               0 


Q ss_pred             cccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCC---CCchHHHHHHHHhcCCCCCCCCCccce
Q 039049          151 YCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQ---PTSTLLLILAMVKGLRGEYPNTTVGFV  224 (305)
Q Consensus       151 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i  224 (305)
                           ...|+.+|...+.+.+.++.++   |+++..+.||.+-.+.....   ...............+      ...+.
T Consensus       144 -----~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~p------l~R~~  212 (245)
T d2ag5a1         144 -----RCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQK------TGRFA  212 (245)
T ss_dssp             -----BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCT------TSSCE
T ss_pred             -----hhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCC------CCCCc
Confidence                 1679999999999999998774   79999999999977642110   0011112222222222      34578


Q ss_pred             eHHHHHHHHHHhhcccc---cCceEEEec
Q 039049          225 HIDDVVGAHILAMEETR---ASGRLICSS  250 (305)
Q Consensus       225 ~v~D~a~~~~~~~~~~~---~~~~~~~~~  250 (305)
                      ..+|+|+++.+++....   .+..+.+.|
T Consensus       213 ~pedva~~v~fL~s~~s~~iTG~~i~VDG  241 (245)
T d2ag5a1         213 TAEEIAMLCVYLASDESAYVTGNPVIIDG  241 (245)
T ss_dssp             EHHHHHHHHHHHHSGGGTTCCSCEEEECT
T ss_pred             CHHHHHHHHHHHhChhhCCCcCceEEeCC
Confidence            99999999999997544   244466654

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1.9e-19  Score=148.62  Aligned_cols=218  Identities=17%  Similarity=0.115  Sum_probs=149.1

Q ss_pred             EEEeCCcchHHHHHHHHHHHcCCeEEEEEe---CCCcccchhh-hhhccCccCceEEEEccCCCcchHHHHhc-----CC
Q 039049            4 YCVTGGTGFIAAHLVKALLDKGHMVRTTVR---DPEDLSKVGF-LWELNGAEERLKIMKADLLMEGSFDEAIQ-----GV   74 (305)
Q Consensus         4 ilItG~~G~iG~~l~~~l~~~g~~V~~~~r---~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----~~   74 (305)
                      ||||||++.||+++++.|++.|.+|+.+.+   +.+....... .........++..+++|++|.+++.++++     .+
T Consensus         5 vlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g~i   84 (285)
T d1jtva_           5 VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEGRV   84 (285)
T ss_dssp             EEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTSCC
T ss_pred             EEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccccch
Confidence            689999999999999999999988666554   3322222111 12223345589999999999999888775     47


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      |+++|+|+......    ..+.+...+++|+.++.++.+++    ++. +-.++|++||.....+.+..           
T Consensus        85 dilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~-~~G~Iv~isS~~g~~~~~~~-----------  152 (285)
T d1jtva_          85 DVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRR-GSGRVLVTGSVGGLMGLPFN-----------  152 (285)
T ss_dssp             SEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEEGGGTSCCTTC-----------
T ss_pred             hhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHc-CCCceEEEechhhcCCCCCc-----------
Confidence            99999999877653    45677889999999999988876    334 55799999998754433221           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHH-----------H-HHHHhc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLL-----------I-LAMVKG  211 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~-----------~-~~~~~~  211 (305)
                                ..|+.||...+.+.+.++.+.   |+++..+.||.+-.+............           + ......
T Consensus       153 ----------~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (285)
T d1jtva_         153 ----------DVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHS  222 (285)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred             ----------hHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHH
Confidence                      669999999999998888764   899999999998766433221111100           0 000000


Q ss_pred             CCCCCCCCCccceeHHHHHHHHHHhhcccccCceEE
Q 039049          212 LRGEYPNTTVGFVHIDDVVGAHILAMEETRASGRLI  247 (305)
Q Consensus       212 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~  247 (305)
                      ...    .......++|+|++++.+++.+.+.-.|.
T Consensus       223 ~~~----~~~~~~~PeeVA~~v~~~~~~~~p~~ry~  254 (285)
T d1jtva_         223 KQV----FREAAQNPEEVAEVFLTALRAPKPTLRYF  254 (285)
T ss_dssp             HHH----HHHHCBCHHHHHHHHHHHHHCSSCCSEEE
T ss_pred             hhh----hcccCCCHHHHHHHHHHHHhCCCCCeEEe
Confidence            000    01235678999999999998766544443

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.82  E-value=3.4e-19  Score=144.41  Aligned_cols=172  Identities=19%  Similarity=0.200  Sum_probs=129.2

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHH---cCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-----
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLD---KGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-----   72 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   72 (305)
                      ||+||||||++.||+++++.|++   .|++|++..|+.++..+...+..   ...++.++++|+.|+++++++++     
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~Dvs~~~~v~~~~~~i~~~   78 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAK---NHSNIHILEIDLRNFDAYDKLVADIEGV   78 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHH---HCTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHh---cCCcEEEEEEEeccHHHHHHHHhhhHHH
Confidence            89999999999999999999974   68999999999876654433222   24589999999999988776543     


Q ss_pred             ----CCCEEEEeccccccCC-----CCchhhhhhhhhHHHHHHHHHHHHhc--------------CCccEEEEeccceee
Q 039049           73 ----GVDGVFHTASPVLVPY-----DNNIQATLIDPCIKGTLNVLSSCKKA--------------KSVKRVVLTSSCSSI  129 (305)
Q Consensus        73 ----~~d~Vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~--------------~~~~~~v~~SS~~~~  129 (305)
                          ++|++|||||......     ..+.+...+++|+.++..+.+.+...              .+..++|++||....
T Consensus        79 ~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~  158 (248)
T d1snya_          79 TKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGS  158 (248)
T ss_dssp             HGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGC
T ss_pred             hhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccc
Confidence                5799999999765432     33446778999999999998876321              134689999996532


Q ss_pred             eccCCCCCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCC
Q 039049          130 RYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPL  193 (305)
Q Consensus       130 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~  193 (305)
                      ....             +.+.     ...|+.||.+...+.+.++.+.   ++++..+.||.+-.+.
T Consensus       159 ~~~~-------------~~~~-----~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m  207 (248)
T d1snya_         159 IQGN-------------TDGG-----MYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDM  207 (248)
T ss_dssp             STTC-------------CSCC-----CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTT
T ss_pred             cCCC-------------CCCC-----hHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCc
Confidence            1110             0010     0569999999999988887664   7999999999987654

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.82  E-value=1.5e-19  Score=148.66  Aligned_cols=216  Identities=14%  Similarity=0.126  Sum_probs=150.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||++.||+++++.|++.|++|++..|+.++..+.   ...  ...++..+.+|+.+.++++++++       .+
T Consensus         6 K~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~---~~~--~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   80 (276)
T d1bdba_           6 EAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAEL---ETD--HGDNVLGIVGDVRSLEDQKQAASRCVARFGKI   80 (276)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHH--HGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH---HHH--cCCCeeEEecccccHHHHHHHHHHHHHHhCCc
Confidence            5899999999999999999999999999999986543322   111  13478999999999988877664       68


Q ss_pred             CEEEEeccccccCCC---------CchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCccc
Q 039049           75 DGVFHTASPVLVPYD---------NNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPL  141 (305)
Q Consensus        75 d~Vi~~a~~~~~~~~---------~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~  141 (305)
                      |++||+||.......         .+.+...+++|+.++..+.+++.    +. + .++|++||.....+.+..      
T Consensus        81 dilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~-g~iI~i~S~~~~~~~~~~------  152 (276)
T d1bdba_          81 DTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVAS-R-GNVIFTISNAGFYPNGGG------  152 (276)
T ss_dssp             CEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T-CEEEEECCGGGTSTTSSC------
T ss_pred             ccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhc-C-CCceeeeechhccCCCCC------
Confidence            999999997543211         12367789999999999988764    33 3 578888887643332211      


Q ss_pred             CCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEecCceecCCCCCCCCchH------HHHHHHHhcCC
Q 039049          142 NESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC--GIDMVVVNPSFVVGPLLAPQPTSTL------LLILAMVKGLR  213 (305)
Q Consensus       142 ~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~i~Rp~~v~G~~~~~~~~~~~------~~~~~~~~~~~  213 (305)
                                     ..|+.+|...+.+.+.++.+.  ++++..+.|+.|-.+...+......      .-+...... .
T Consensus       153 ---------------~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~-~  216 (276)
T d1bdba_         153 ---------------PLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKS-V  216 (276)
T ss_dssp             ---------------HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTT-T
T ss_pred             ---------------chHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHh-c
Confidence                           669999999999999888775  4999999999987664322111000      001111111 1


Q ss_pred             CCCCCCCccceeHHHHHHHHHHhhccc---c-cCceEEEec
Q 039049          214 GEYPNTTVGFVHIDDVVGAHILAMEET---R-ASGRLICSS  250 (305)
Q Consensus       214 ~~~~~~~~~~i~v~D~a~~~~~~~~~~---~-~~~~~~~~~  250 (305)
                      ..    ..-+..++|+|.++++++..+   . .+..+++.|
T Consensus       217 ~P----lgR~g~peeva~~v~fL~S~~~a~~itG~~i~VDG  253 (276)
T d1bdba_         217 LP----IGRMPEVEEYTGAYVFFATRGDAAPATGALLNYDG  253 (276)
T ss_dssp             CT----TSSCCCGGGGSHHHHHHHCHHHHTTCSSCEEEESS
T ss_pred             CC----CCCCcCHHHHHHHHHHHcCCcccCCeeCcEEEECc
Confidence            11    334678999999999988532   1 344567754

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.81  E-value=2.9e-18  Score=140.77  Aligned_cols=221  Identities=15%  Similarity=0.033  Sum_probs=153.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCccc-chhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLS-KVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      |+++||||++.||+++++.|++.|++|++..|+.++.. ....  .......++.++++|+.|++++.++++       +
T Consensus        19 K~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~--~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   96 (272)
T d1g0oa_          19 KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVA--AIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK   96 (272)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHH--HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHH--HHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            78999999999999999999999999999988754321 1111  122224478999999999988887764       6


Q ss_pred             CCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhcC-CccEEEEeccceeeec-cCCCCCCcccCCCCCC
Q 039049           74 VDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKAK-SVKRVVLTSSCSSIRY-RHDAQQVSPLNESHWS  147 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~-~~~~~~~~~~~E~~~~  147 (305)
                      +|++||+++......    ..+.+...+++|+.++..+.+++...- .-.++++++|...... ...             
T Consensus        97 idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~~~-------------  163 (272)
T d1g0oa_          97 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPK-------------  163 (272)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSS-------------
T ss_pred             CCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccccccccc-------------
Confidence            799999999876543    456678889999999999999986541 2246777776542111 110             


Q ss_pred             CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCC--------CCC-CCchHHHHH-HHHhcCCC
Q 039049          148 DPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLL--------APQ-PTSTLLLIL-AMVKGLRG  214 (305)
Q Consensus       148 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~--------~~~-~~~~~~~~~-~~~~~~~~  214 (305)
                              ...|+.+|...+.+.+.++.++   |+++..+.||.+-.+..        ... ......... ......+ 
T Consensus       164 --------~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-  234 (272)
T d1g0oa_         164 --------HAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSP-  234 (272)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCT-
T ss_pred             --------hhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCC-
Confidence                    1669999999999999888764   89999999999865421        000 001111111 1111211 


Q ss_pred             CCCCCCccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          215 EYPNTTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       215 ~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                           ..-+...+|+|.++.+++....   .+..+.+.|.
T Consensus       235 -----lgR~~~peevA~~v~fL~s~~s~~itG~~i~vDGG  269 (272)
T d1g0oa_         235 -----LRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGG  269 (272)
T ss_dssp             -----TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -----CCCCcCHHHHHHHHHHHhCchhcCccCceEeECCC
Confidence                 2347899999999999997544   2334666544

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.80  E-value=1.8e-19  Score=149.67  Aligned_cols=224  Identities=14%  Similarity=0.051  Sum_probs=155.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccc---hhhhhhc-cCccCceEEEEccCCCcchHHHHhc-----
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSK---VGFLWEL-NGAEERLKIMKADLLMEGSFDEAIQ-----   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~---~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~-----   72 (305)
                      |+++||||++.||+++++.|+++|++|++.+|+.+....   ...+... ...........+|+.|.+..+++++     
T Consensus         8 KvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~~   87 (302)
T d1gz6a_           8 RVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTALDT   87 (302)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999887542211   0111110 0001134566788888777666553     


Q ss_pred             --CCCEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCCCcccC
Q 039049           73 --GVDGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCK----KAKSVKRVVLTSSCSSIRYRHDAQQVSPLN  142 (305)
Q Consensus        73 --~~d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  142 (305)
                        ++|++|||||......    ..+.+...+++|+.++..+.+++.    +. +-.++|++||.....+.+..       
T Consensus        88 ~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~~G~IV~isS~~~~~~~~~~-------  159 (302)
T d1gz6a_          88 FGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ-NYGRIIMTASASGIYGNFGQ-------  159 (302)
T ss_dssp             TSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHHCCTTC-------
T ss_pred             cCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhC-CCcEEEEeCChhhcCCCCCc-------
Confidence              6899999999877643    456788899999999999998864    33 45699999998765543321       


Q ss_pred             CCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCC
Q 039049          143 ESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNT  219 (305)
Q Consensus       143 E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (305)
                                    ..|+.+|...+.+.+.++.+.   |+++..+.|+.+-...... .                  +..
T Consensus       160 --------------~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~-~------------------~~~  206 (302)
T d1gz6a_         160 --------------ANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETV-M------------------PED  206 (302)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGG-S------------------CHH
T ss_pred             --------------HHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhc-C------------------cHh
Confidence                          679999999999999988774   7999999998763221110 0                  001


Q ss_pred             CccceeHHHHHHHHHHhhcccc--cCceEEEe--------------------cCCcCHHHHHHHHHHhC
Q 039049          220 TVGFVHIDDVVGAHILAMEETR--ASGRLICS--------------------SSVAHWSPIIEMLKATY  266 (305)
Q Consensus       220 ~~~~i~v~D~a~~~~~~~~~~~--~~~~~~~~--------------------~~~~s~~el~~~i~~~~  266 (305)
                      ...++..+|+|.++++++....  .+..+.+.                    +.+.|..++++.+.+..
T Consensus       207 ~~~~~~PedvA~~v~fL~S~~a~itG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~t~e~i~~~~~~i~  275 (302)
T d1gz6a_         207 LVEALKPEYVAPLVLWLCHESCEENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKIC  275 (302)
T ss_dssp             HHHHSCGGGTHHHHHHHTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHT
T ss_pred             hHhcCCHHHHHHHHHHHcCCCcCCCCcEEEeCCCceeEEEEeecCcccccCCCCCCCHHHHHHHHHHHh
Confidence            2234567999999999985322  12223221                    12457778888877766

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.80  E-value=7.2e-19  Score=143.38  Aligned_cols=212  Identities=13%  Similarity=0.041  Sum_probs=147.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHH---cCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc------
Q 039049            2 PEYCVTGGTGFIAAHLVKALLD---KGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ------   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   72 (305)
                      |.++||||++.||++++++|++   +|++|++..|+.++..+............++.++++|+.+++++.++++      
T Consensus         7 KvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~~~   86 (259)
T d1oaaa_           7 AVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELP   86 (259)
T ss_dssp             EEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHhh
Confidence            5689999999999999999986   7999999999876554432221112223478899999999988887753      


Q ss_pred             -----CCCEEEEeccccccCC-------CCchhhhhhhhhHHHHHHHHHHHHhcC---C--ccEEEEeccceeeeccCCC
Q 039049           73 -----GVDGVFHTASPVLVPY-------DNNIQATLIDPCIKGTLNVLSSCKKAK---S--VKRVVLTSSCSSIRYRHDA  135 (305)
Q Consensus        73 -----~~d~Vi~~a~~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~--~~~~v~~SS~~~~~~~~~~  135 (305)
                           ..|++||+||......       ..+.+...+++|+.++..+.+++...-   +  ..++|++||.....+.+..
T Consensus        87 ~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~~~~~  166 (259)
T d1oaaa_          87 RPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGW  166 (259)
T ss_dssp             CCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCTTC
T ss_pred             hhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCCCccc
Confidence                 3479999999754321       235677889999999999999885531   1  3589999998754432221


Q ss_pred             CCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-cCCcEEEEecCceecCCCCCCC--CchHHHHHHHHhcC
Q 039049          136 QQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD-CGIDMVVVNPSFVVGPLLAPQP--TSTLLLILAMVKGL  212 (305)
Q Consensus       136 ~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~~~~~~i~Rp~~v~G~~~~~~~--~~~~~~~~~~~~~~  212 (305)
                                           ..|+.||...+.+.+.++.+ .++++..+.||.+-.+......  ..............
T Consensus       167 ---------------------~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~  225 (259)
T d1oaaa_         167 ---------------------GLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLK  225 (259)
T ss_dssp             ---------------------HHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHH
T ss_pred             ---------------------hHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcC
Confidence                                 67999999999999888766 4899999999998765311000  00011111111111


Q ss_pred             CCCCCCCCccceeHHHHHHHHHHhhccc
Q 039049          213 RGEYPNTTVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       213 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~  240 (305)
                      +      ...+..++|+|++++.+++..
T Consensus       226 ~------~~r~~~p~evA~~i~~ll~~~  247 (259)
T d1oaaa_         226 S------DGALVDCGTSAQKLLGLLQKD  247 (259)
T ss_dssp             H------TTCSBCHHHHHHHHHHHHHHC
T ss_pred             C------CCCCCCHHHHHHHHHHHhhhc
Confidence            1      123578999999999998753

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.78  E-value=3.6e-18  Score=137.14  Aligned_cols=191  Identities=14%  Similarity=0.070  Sum_probs=135.5

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHH-------Hhc-
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDE-------AIQ-   72 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-------~~~-   72 (305)
                      .|+||||||+|.||+++++.|+++|++|.+++|+......            .......|..+.+....       .+. 
T Consensus         2 gK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (236)
T d1dhra_           2 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEAS------------ASVIVKMTDSFTEQADQVTAEVGKLLGD   69 (236)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSS------------EEEECCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc------------ccceeecccCcHHHHHHHHHHHHHHhCC
Confidence            4899999999999999999999999999999887653221            22334455544333322       222 


Q ss_pred             -CCCEEEEeccccccCC-----CCchhhhhhhhhHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCCCcccCCCC
Q 039049           73 -GVDGVFHTASPVLVPY-----DNNIQATLIDPCIKGTLNVLSSCKKA-KSVKRVVLTSSCSSIRYRHDAQQVSPLNESH  145 (305)
Q Consensus        73 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~  145 (305)
                       ++|++|||||......     ..+.++..+++|+.++.++.+++... +.-.++|++||.....+.+..          
T Consensus        70 ~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~----------  139 (236)
T d1dhra_          70 QKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGM----------  139 (236)
T ss_dssp             CCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTB----------
T ss_pred             CCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCccCC----------
Confidence             4799999999543211     23456678999999999999887653 133589999998754333221          


Q ss_pred             CCCcccccccchhHHHHHHHHHHHHHHHHHH-----cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCC
Q 039049          146 WSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD-----CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTT  220 (305)
Q Consensus       146 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (305)
                                 ..|+.||...+.+.+.++.+     .++++..+.|+.+..+.           ........      ..
T Consensus       140 -----------~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~-----------~~~~~~~~------~~  191 (236)
T d1dhra_         140 -----------IGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM-----------NRKSMPEA------DF  191 (236)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH-----------HHHHSTTS------CG
T ss_pred             -----------cccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCc-----------chhhCccc------hh
Confidence                       67999999999999999865     36999999999987652           11111111      13


Q ss_pred             ccceeHHHHHHHHHHhhcccc
Q 039049          221 VGFVHIDDVVGAHILAMEETR  241 (305)
Q Consensus       221 ~~~i~v~D~a~~~~~~~~~~~  241 (305)
                      -.++..+++++.+..++....
T Consensus       192 ~~~~~pe~va~~~~~l~s~~~  212 (236)
T d1dhra_         192 SSWTPLEFLVETFHDWITGNK  212 (236)
T ss_dssp             GGSEEHHHHHHHHHHHHTTTT
T ss_pred             hcCCCHHHHHHHHHHHhCCCc
Confidence            457889999999999987543

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.77  E-value=3.2e-18  Score=137.49  Aligned_cols=188  Identities=13%  Similarity=0.100  Sum_probs=130.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHH-------HHh--c
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFD-------EAI--Q   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~-------~~~--~   72 (305)
                      .|||||||+|.||+++++.|+++|++|++++|++.....            ....+.+|..+.+...       ..+  .
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   70 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD------------SNILVDGNKNWTEQEQSILEQTASSLQGS   70 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS------------EEEECCTTSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhccc------------ccceeccccCchhHHHHHHHHHHHHhcCC
Confidence            479999999999999999999999999999998753221            2233445554433222       222  2


Q ss_pred             CCCEEEEeccccccCC-----CCchhhhhhhhhHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCCCcccCCCCC
Q 039049           73 GVDGVFHTASPVLVPY-----DNNIQATLIDPCIKGTLNVLSSCKKA-KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHW  146 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  146 (305)
                      ++|++|||||......     ..+.++..+++|+.++..+.+.+... +...++|++||.....+.+..           
T Consensus        71 ~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~~~-----------  139 (235)
T d1ooea_          71 QVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSM-----------  139 (235)
T ss_dssp             CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTB-----------
T ss_pred             CeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCcccc-----------
Confidence            5799999999643321     12446667999999999988887553 123589999998754443221           


Q ss_pred             CCcccccccchhHHHHHHHHHHHHHHHHHHc-----CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCc
Q 039049          147 SDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC-----GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTV  221 (305)
Q Consensus       147 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (305)
                                ..|+.||.+.+.+.+.++.+.     ++++..+.|+.+-.+           +......+.      ...
T Consensus       140 ----------~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~-----------~~~~~~~~~------~~~  192 (235)
T d1ooea_         140 ----------IGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP-----------MNRKWMPNA------DHS  192 (235)
T ss_dssp             ----------HHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCH-----------HHHHHSTTC------CGG
T ss_pred             ----------cchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCc-----------chhhhCcCC------ccc
Confidence                      679999999999999988663     677888899887543           122222111      145


Q ss_pred             cceeHHHHHHHHHHhhcc
Q 039049          222 GFVHIDDVVGAHILAMEE  239 (305)
Q Consensus       222 ~~i~v~D~a~~~~~~~~~  239 (305)
                      .++..+|+++.++.++..
T Consensus       193 ~~~~~~~va~~~~~~l~~  210 (235)
T d1ooea_         193 SWTPLSFISEHLLKWTTE  210 (235)
T ss_dssp             GCBCHHHHHHHHHHHHHC
T ss_pred             cCCCHHHHHHHHHHHhcC
Confidence            678999999998765544

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=1.1e-17  Score=136.95  Aligned_cols=201  Identities=14%  Similarity=0.054  Sum_probs=143.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (305)
                      |+++||||++.||+++++.|+++|++|++.+|+.++..+..... .......+..+.+|..+.+......+       .+
T Consensus        15 K~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~   93 (269)
T d1xu9a_          15 KKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHC-LELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGL   93 (269)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-HHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-hhhhcccchhhhhhhhhHHHHHHHHHHHHHHhCCc
Confidence            78999999999999999999999999999999876554332211 11123467788899988776655443       67


Q ss_pred             CEEEEeccccccCC----CCchhhhhhhhhHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCCCcccCCCCCCC
Q 039049           75 DGVFHTASPVLVPY----DNNIQATLIDPCIKGTLNVLSSCKKA--KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSD  148 (305)
Q Consensus        75 d~Vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~  148 (305)
                      |+++|+|+......    ..+.+...+++|+.++..+.+.+...  .+-.++|++||.....+.+..             
T Consensus        94 ~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~p~~-------------  160 (269)
T d1xu9a_          94 DMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMV-------------  160 (269)
T ss_dssp             SEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTC-------------
T ss_pred             cccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCCCCc-------------
Confidence            99999999876543    34456778999999999888876421  022589999998754433221             


Q ss_pred             cccccccchhHHHHHHHHHHHHHHHHHH-----cCCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccc
Q 039049          149 PDYCKHYNLWYAYAKTIAEKEAWRIAKD-----CGIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGF  223 (305)
Q Consensus       149 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (305)
                              ..|+.||...+.+.+.++.+     .++++..+.||.|-.+           +......+..      ....
T Consensus       161 --------~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~-----------~~~~~~~~~~------~~~~  215 (269)
T d1xu9a_         161 --------AAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE-----------TAMKAVSGIV------HMQA  215 (269)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH-----------HHHHHSCGGG------GGGC
T ss_pred             --------hHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCc-----------HHHHhccCCc------cccC
Confidence                    67999999999998888765     3588889999988543           1222222211      3345


Q ss_pred             eeHHHHHHHHHHhhcccc
Q 039049          224 VHIDDVVGAHILAMEETR  241 (305)
Q Consensus       224 i~v~D~a~~~~~~~~~~~  241 (305)
                      ...+++|+.++..+....
T Consensus       216 ~~~e~~a~~i~~~~~~~~  233 (269)
T d1xu9a_         216 APKEECALEIIKGGALRQ  233 (269)
T ss_dssp             BCHHHHHHHHHHHHHTTC
T ss_pred             CCHHHHHHHHHHHhhcCC
Confidence            678999999888766533

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.76  E-value=3.1e-17  Score=133.67  Aligned_cols=220  Identities=13%  Similarity=0.055  Sum_probs=151.6

Q ss_pred             CCcEEEeCCcc--hHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc------
Q 039049            1 MPEYCVTGGTG--FIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ------   72 (305)
Q Consensus         1 m~~ilItG~~G--~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   72 (305)
                      .|++|||||+|  .||+++++.|+++|++|++..|+.........+   .....+....+.|..+..+..+.+.      
T Consensus         5 gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (258)
T d1qsga_           5 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEF---AAQLGSDIVLQCDVAEDASIDTMFAELGKVW   81 (258)
T ss_dssp             TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHH---HHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             CCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---HhhcCCcceeecccchHHHHHHHHHHhhhcc
Confidence            37899999998  799999999999999999999986533332222   2223467788889988776666553      


Q ss_pred             -CCCEEEEeccccccCC---------CCchhhhhhhhhHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCCCccc
Q 039049           73 -GVDGVFHTASPVLVPY---------DNNIQATLIDPCIKGTLNVLSSCKKAK-SVKRVVLTSSCSSIRYRHDAQQVSPL  141 (305)
Q Consensus        73 -~~d~Vi~~a~~~~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~  141 (305)
                       ..|++||+|+......         ..+........|+.+...+.+.+.... .-+.+|++||.....+.+..      
T Consensus        82 ~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~~~------  155 (258)
T d1qsga_          82 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNY------  155 (258)
T ss_dssp             SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTT------
T ss_pred             cccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCCCc------
Confidence             5699999998764432         123345567788888888887775531 33468888887643332211      


Q ss_pred             CCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCC
Q 039049          142 NESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPN  218 (305)
Q Consensus       142 ~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (305)
                                     ..|+.+|.+.+.+.+.++.+.   ++++..++|+.|..+..... ..............+     
T Consensus       156 ---------------~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~-~~~~~~~~~~~~~~p-----  214 (258)
T d1qsga_         156 ---------------NVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI-KDFRKMLAHCEAVTP-----  214 (258)
T ss_dssp             ---------------THHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGS-TTHHHHHHHHHHHST-----
T ss_pred             ---------------HHHHHHHHHHHHHHHHHHHHhCccCceeeccccccccccccccc-chhhhHHHHHHhCCC-----
Confidence                           569999999999999998775   69999999999987754322 222222223332222     


Q ss_pred             CCccceeHHHHHHHHHHhhcccc--c-CceEEEecC
Q 039049          219 TTVGFVHIDDVVGAHILAMEETR--A-SGRLICSSS  251 (305)
Q Consensus       219 ~~~~~i~v~D~a~~~~~~~~~~~--~-~~~~~~~~~  251 (305)
                       ..-+..++|+|.++.+++....  . +..+.+.|.
T Consensus       215 -l~R~~~peeia~~v~fL~s~~s~~itG~~i~vDGG  249 (258)
T d1qsga_         215 -IRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGG  249 (258)
T ss_dssp             -TSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             -CCCCcCHHHHHHHHHHHhCchhcCccCceEEECcC
Confidence             2347889999999999997543  2 344666543

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=5.2e-17  Score=131.44  Aligned_cols=207  Identities=16%  Similarity=0.132  Sum_probs=144.5

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------C
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------G   73 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (305)
                      +|.++||||++.||++++++|+++|++|++.+|+.+...+...  ..   ..+.....+|+.+.+.++....       .
T Consensus         5 GKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~--~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (248)
T d2o23a1           5 GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAK--KL---GNNCVFAPADVTSEKDVQTALALAKGKFGR   79 (248)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHH--HH---CTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH--Hh---CCCccccccccccccccccccccccccccc
Confidence            3789999999999999999999999999999999875543221  11   2367888899988766554432       5


Q ss_pred             CCEEEEeccccccCC----------CCchhhhhhhhhHHHHHHHHHHHHhc---------CCccEEEEeccceeeeccCC
Q 039049           74 VDGVFHTASPVLVPY----------DNNIQATLIDPCIKGTLNVLSSCKKA---------KSVKRVVLTSSCSSIRYRHD  134 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~~v~~SS~~~~~~~~~  134 (305)
                      .|.++++++......          ..+.+...+++|+.++.++.+++...         .+..++|++||.....+.+.
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~  159 (248)
T d2o23a1          80 VDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVG  159 (248)
T ss_dssp             CCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTT
T ss_pred             ccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCCC
Confidence            688888876544321          23467788999999999999887432         12347999999876543322


Q ss_pred             CCCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhc
Q 039049          135 AQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKG  211 (305)
Q Consensus       135 ~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~  211 (305)
                      .                     ..|+.+|...+.+.+.++.++   |+++..+.||.+..+.......   .........
T Consensus       160 ~---------------------~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~---~~~~~~~~~  215 (248)
T d2o23a1         160 Q---------------------AAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPE---KVCNFLASQ  215 (248)
T ss_dssp             C---------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-------------CHHHHT
T ss_pred             c---------------------hHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCH---HHHHHHHhc
Confidence            1                     669999999999999998775   7999999999987664322111   111122222


Q ss_pred             CCCCCCCCCccceeHHHHHHHHHHhhcccc
Q 039049          212 LRGEYPNTTVGFVHIDDVVGAHILAMEETR  241 (305)
Q Consensus       212 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  241 (305)
                      .+  +   ..-+..++|+|+++.++++.+-
T Consensus       216 ~p--l---~~R~g~peevA~~v~fL~s~~~  240 (248)
T d2o23a1         216 VP--F---PSRLGDPAEYAHLVQAIIENPF  240 (248)
T ss_dssp             CS--S---SCSCBCHHHHHHHHHHHHHCTT
T ss_pred             CC--C---CCCCcCHHHHHHHHHHHHhCCC
Confidence            11  0   1236789999999999987543

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.76  E-value=2.9e-17  Score=133.06  Aligned_cols=196  Identities=17%  Similarity=0.171  Sum_probs=133.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC--eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH--MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      |+||||||++.||++++++|+++|+  +|++.+|+.++..+.   ...  ...++.++++|+.|.++++++++       
T Consensus         4 KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l---~~~--~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~   78 (250)
T d1yo6a1           4 GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATEL---KSI--KDSRVHVLPLTVTCDKSLDTFVSKVGEIVG   78 (250)
T ss_dssp             SEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHH---HTC--CCTTEEEEECCTTCHHHHHHHHHHHHHHHG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHH---HHh--hCCceEEEEEecCCHHHHHHHHHHHHHHhC
Confidence            6899999999999999999999995  688888887654332   222  24479999999999887776553       


Q ss_pred             --CCCEEEEeccccccCC-----CCchhhhhhhhhHHHHHHHHHHHHhc--------------CCccEEEEeccceeeec
Q 039049           73 --GVDGVFHTASPVLVPY-----DNNIQATLIDPCIKGTLNVLSSCKKA--------------KSVKRVVLTSSCSSIRY  131 (305)
Q Consensus        73 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~--------------~~~~~~v~~SS~~~~~~  131 (305)
                        ++|++|||||......     ..+.+...+++|+.++.++.+.+...              ....+++.+|+......
T Consensus        79 ~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~  158 (250)
T d1yo6a1          79 SDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSIT  158 (250)
T ss_dssp             GGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCST
T ss_pred             CCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccccccccc
Confidence              3899999999764321     34456789999999999998876321              01236777776543222


Q ss_pred             cCCCCCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHH
Q 039049          132 RHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAM  208 (305)
Q Consensus       132 ~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~  208 (305)
                      ...       .. ....+.      ..|+.||.+...+.+.++.+.   |+++..+.||.|-.+...             
T Consensus       159 ~~~-------~~-~~~~~~------~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~-------------  211 (250)
T d1yo6a1         159 DNT-------SG-SAQFPV------LAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGG-------------  211 (250)
T ss_dssp             TCC-------ST-TSSSCB------HHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------------
T ss_pred             CCc-------cc-ccchhH------HHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCC-------------
Confidence            111       10 111111      569999999999999888764   799999999987544211             


Q ss_pred             HhcCCCCCCCCCccceeHHHHHHHHHHhhccc
Q 039049          209 VKGLRGEYPNTTVGFVHIDDVVGAHILAMEET  240 (305)
Q Consensus       209 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  240 (305)
                                 ....+.+++.++.++..+...
T Consensus       212 -----------~~~~~~~e~~a~~~~~~~~~~  232 (250)
T d1yo6a1         212 -----------KNAALTVEQSTAELISSFNKL  232 (250)
T ss_dssp             ------------------HHHHHHHHHHHTTC
T ss_pred             -----------CCCCCCHHHHHHHHHHHHhcC
Confidence                       011256788888888888653

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.4e-17  Score=136.87  Aligned_cols=202  Identities=19%  Similarity=0.093  Sum_probs=140.5

Q ss_pred             CcE-EEeCCcchHHHHHHHHHHHc-CCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            2 PEY-CVTGGTGFIAAHLVKALLDK-GHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~i-lItG~~G~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      |+| +||||++.||.++++.|++. |++|++..|+.++.++....  +.....++.++++|+.|.++++++++       
T Consensus         3 ~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~--l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g   80 (275)
T d1wmaa1           3 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQ--LQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG   80 (275)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHH--HHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHH--HHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcC
Confidence            566 89999999999999999986 89999999997765433221  22234578999999999988877654       


Q ss_pred             CCCEEEEeccccccCCC----CchhhhhhhhhHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCCCccc------
Q 039049           73 GVDGVFHTASPVLVPYD----NNIQATLIDPCIKGTLNVLSSCKKA-KSVKRVVLTSSCSSIRYRHDAQQVSPL------  141 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~------  141 (305)
                      .+|++|||||.......    .+.+...+++|+.++..+.+.+... +.-.++|++||..........   .|+      
T Consensus        81 ~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~---~~y~~~k~~  157 (275)
T d1wmaa1          81 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSC---SPELQQKFR  157 (275)
T ss_dssp             SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTS---CHHHHHHHH
T ss_pred             CcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceecccccc---chhhhhhhc
Confidence            68999999998765432    2345668899999999999988543 122489999997654332110   000      


Q ss_pred             -----------------------CCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-------cCCcEEEEecCceec
Q 039049          142 -----------------------NESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD-------CGIDMVVVNPSFVVG  191 (305)
Q Consensus       142 -----------------------~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-------~~~~~~i~Rp~~v~G  191 (305)
                                             .......+.      ..|+.||.....+.+.++.+       .++.+..+.||.|-.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T  231 (275)
T d1wmaa1         158 SETITEEELVGLMNKFVEDTKKGVHQKEGWPS------SAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRT  231 (275)
T ss_dssp             CSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCS------CHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCS
T ss_pred             ccccchhhhccccccchhcccccccccCCCch------HHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccC
Confidence                                   000011111      56999999988877665544       279999999999865


Q ss_pred             CCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhc
Q 039049          192 PLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAME  238 (305)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  238 (305)
                      +...+                        .-...++|.|+.+++++.
T Consensus       232 ~m~~~------------------------~~~~~pee~A~~~~~~a~  254 (275)
T d1wmaa1         232 DMAGP------------------------KATKSPEEGAETPVYLAL  254 (275)
T ss_dssp             TTTCT------------------------TCSBCHHHHTHHHHHHHS
T ss_pred             CcccC------------------------cccCCHHHHHHHHHHHHc
Confidence            53211                        112357899998888764

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.71  E-value=3.7e-16  Score=128.96  Aligned_cols=218  Identities=12%  Similarity=0.003  Sum_probs=140.2

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCccc-chh-hhhhccCccCceEE-----------------EEccC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLS-KVG-FLWELNGAEERLKI-----------------MKADL   61 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~-~~~-~~~~~~~~~~~~~~-----------------~~~D~   61 (305)
                      |+-++||||++.||+++++.|++.|++|++..|+..... ... .+....  ......                 ..+|+
T Consensus         2 ~pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~dv   79 (284)
T d1e7wa_           2 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR--PNSAITVQADLSNVATAPVSGADGSAPV   79 (284)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS--TTCEEEEECCCSSSCBCCCC----CCCB
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhc--CCceEEEEeecccccccccccccccccC
Confidence            566899999999999999999999999999887654321 111 111111  112333                 44567


Q ss_pred             CCcchHHHHhc-------CCCEEEEeccccccCCCCc------------------hhhhhhhhhHHHHHHHHHHHHhc--
Q 039049           62 LMEGSFDEAIQ-------GVDGVFHTASPVLVPYDNN------------------IQATLIDPCIKGTLNVLSSCKKA--  114 (305)
Q Consensus        62 ~d~~~~~~~~~-------~~d~Vi~~a~~~~~~~~~~------------------~~~~~~~~n~~~~~~l~~~~~~~--  114 (305)
                      .+.++++++++       ++|++|||||...+....+                  .....+.+|+.++..+.+++.+.  
T Consensus        80 ~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~  159 (284)
T d1e7wa_          80 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA  159 (284)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhh
Confidence            77777777653       6899999999876542111                  12235788999998888775331  


Q ss_pred             -------CCccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEE
Q 039049          115 -------KSVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVV  184 (305)
Q Consensus       115 -------~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~  184 (305)
                             .+..++|+++|.....+....                     ..|+.+|...+.+.+.++.++   |+++..+
T Consensus       160 ~~~~~~~~~~~~ii~~~s~~~~~~~~~~---------------------~~Y~asKaal~~lt~~lA~el~~~gIrvN~I  218 (284)
T d1e7wa_         160 GTPAKHRGTNYSIINMVDAMTNQPLLGY---------------------TIYTMAKGALEGLTRSAALELAPLQIRVNGV  218 (284)
T ss_dssp             TSCGGGSCSCEEEEEECCTTTTSCCTTC---------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred             hhHHHhcCCCCcccccccccccCCccce---------------------eeeccccccchhhhHHHHHHhCCcccccccc
Confidence                   133467777776533222111                     669999999999999988764   8999999


Q ss_pred             ecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          185 NPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       185 Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      .||.+-...     ..............+.     ..-+...+|+|.++++++....   .+..+.+.|.
T Consensus       219 ~PG~t~~~~-----~~~~~~~~~~~~~~pl-----~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG  278 (284)
T d1e7wa_         219 GPGLSVLVD-----DMPPAVWEGHRSKVPL-----YQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGG  278 (284)
T ss_dssp             EESSBCCGG-----GSCHHHHHHHHTTCTT-----TTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ccccccccc-----cCCHHHHHHHHhcCCC-----CCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcC
Confidence            999642221     1112233333333221     1346789999999999997543   2445666543

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.71  E-value=3.9e-16  Score=125.68  Aligned_cols=207  Identities=19%  Similarity=0.143  Sum_probs=143.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc------CCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ------GVD   75 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------~~d   75 (305)
                      |++|||||++.||+++++.|++.|++|++.+|+.+..              +...+++|+.+......+..      ..+
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~--------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~~   67 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGE--------------DLIYVEGDVTREEDVRRAVARAQEEAPLF   67 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSS--------------SSEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcccc--------------cceEeeccccchhhhHHHHHhhhcccccc
Confidence            7899999999999999999999999999999986532              45678899988766555543      345


Q ss_pred             EEEEeccccccCC--------CCchhhhhhhhhHHHHHHHHHHHHhc---------CCccEEEEeccceeeeccCCCCCC
Q 039049           76 GVFHTASPVLVPY--------DNNIQATLIDPCIKGTLNVLSSCKKA---------KSVKRVVLTSSCSSIRYRHDAQQV  138 (305)
Q Consensus        76 ~Vi~~a~~~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~~v~~SS~~~~~~~~~~~~~  138 (305)
                      .++++++......        ..+.+...+++|+.+...+...+...         .+-.++|++||.....+.+..   
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~---  144 (241)
T d1uaya_          68 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQ---  144 (241)
T ss_dssp             EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTC---
T ss_pred             chhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCc---
Confidence            5566555433211        23455667899999888888765322         133589999998765443221   


Q ss_pred             cccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCC
Q 039049          139 SPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGE  215 (305)
Q Consensus       139 ~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  215 (305)
                                        ..|+.+|...+.+.+.++.+.   |+++..+.||.+-.+......   ...........+. 
T Consensus       145 ------------------~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~---~~~~~~~~~~~~~-  202 (241)
T d1uaya_         145 ------------------AAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP---EKAKASLAAQVPF-  202 (241)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC---HHHHHHHHTTCCS-
T ss_pred             ------------------hhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhh---hhHHHHHHhcCCC-
Confidence                              679999999999999998764   799999999998765432211   1122222222221 


Q ss_pred             CCCCCccceeHHHHHHHHHHhhcccccCc-eEEEecC
Q 039049          216 YPNTTVGFVHIDDVVGAHILAMEETRASG-RLICSSS  251 (305)
Q Consensus       216 ~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~~  251 (305)
                          ..-+..++|+|.++.++++.....| .+.+.|.
T Consensus       203 ----~~R~g~pedvA~~v~fL~s~~~iTG~~i~VDGG  235 (241)
T d1uaya_         203 ----PPRLGRPEEYAALVLHILENPMLNGEVVRLDGA  235 (241)
T ss_dssp             ----SCSCCCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             ----CCCCcCHHHHHHHHHHHHhCCCCCCCEEEECCc
Confidence                1235689999999999998544444 4666543

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.69  E-value=1.4e-15  Score=124.78  Aligned_cols=219  Identities=11%  Similarity=0.060  Sum_probs=137.6

Q ss_pred             CcEEEeCCcc--hHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            2 PEYCVTGGTG--FIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~~G--~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      |++|||||+|  .||.++++.|+++|++|++..|+.........+   ........+..+|+.+.+++.++++       
T Consensus         6 K~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l---~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   82 (274)
T d2pd4a1           6 KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPI---AQELNSPYVYELDVSKEEHFKSLYNSVKKDLG   82 (274)
T ss_dssp             CEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHH---HHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---HhhCCceeEeeecccchhhHHHHHHHHHHHcC
Confidence            7899999887  799999999999999999999986433332222   2223467788999999887777663       


Q ss_pred             CCCEEEEeccccccCC-----CCchhhhh---hhhhHHHHHHHHHHHHhcCCcc-EEEEeccceeeeccCCCCCCcccCC
Q 039049           73 GVDGVFHTASPVLVPY-----DNNIQATL---IDPCIKGTLNVLSSCKKAKSVK-RVVLTSSCSSIRYRHDAQQVSPLNE  143 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~~-----~~~~~~~~---~~~n~~~~~~l~~~~~~~~~~~-~~v~~SS~~~~~~~~~~~~~~~~~E  143 (305)
                      .+|++||+++......     ........   ...+......+........+.. .++..|+..........        
T Consensus        83 ~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~~--------  154 (274)
T d2pd4a1          83 SLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHY--------  154 (274)
T ss_dssp             CEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTC--------
T ss_pred             CCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeecccccccccccc--------
Confidence            6799999999765421     11111212   2222223333443333321222 34555544432221111        


Q ss_pred             CCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHhcCCCCCCCCC
Q 039049          144 SHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVKGLRGEYPNTT  220 (305)
Q Consensus       144 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (305)
                                   ..|+.+|...+.+.+.++.+.   |+++..+.|+.+..+........ ...........+      .
T Consensus       155 -------------~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~-~~~~~~~~~~~p------~  214 (274)
T d2pd4a1         155 -------------NVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADF-RMILKWNEINAP------L  214 (274)
T ss_dssp             -------------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTH-HHHHHHHHHHST------T
T ss_pred             -------------hhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCch-HHHHHHHhhhhh------c
Confidence                         679999999999998887664   79999999999887653322111 111122212222      3


Q ss_pred             ccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          221 VGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       221 ~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      .-+..++|+|.++.+++....   .+..+.+.|.
T Consensus       215 ~r~~~pedIA~~v~fL~S~~s~~itG~~i~vDGG  248 (274)
T d2pd4a1         215 RKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAG  248 (274)
T ss_dssp             SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCCcCHHHHHHHHHHHhChhhCCCcCceEEECCC
Confidence            456889999999999998644   2335666544

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.68  E-value=4.9e-15  Score=120.90  Aligned_cols=217  Identities=16%  Similarity=0.103  Sum_probs=137.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccc--hhhhhhccCccCceEEEEccCCCcc----hHHHHh----
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSK--VGFLWELNGAEERLKIMKADLLMEG----SFDEAI----   71 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~D~~d~~----~~~~~~----   71 (305)
                      +..|||||++.||++++++|++.|++|++..|+.++..+  ...+...  ........+.|..+..    .+.+++    
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAA--RAGSAVLCKGDLSLSSSLLDCCEDIIDCSF   79 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--STTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhh--cCCceEEEecccccchhHHHHHHHHHHHHH
Confidence            457999999999999999999999999999998764322  1112111  1335666776665432    233322    


Q ss_pred             ---cCCCEEEEeccccccCCC---------------CchhhhhhhhhHHHHHHHHHHHHhcC--------CccEEEEecc
Q 039049           72 ---QGVDGVFHTASPVLVPYD---------------NNIQATLIDPCIKGTLNVLSSCKKAK--------SVKRVVLTSS  125 (305)
Q Consensus        72 ---~~~d~Vi~~a~~~~~~~~---------------~~~~~~~~~~n~~~~~~l~~~~~~~~--------~~~~~v~~SS  125 (305)
                         ..+|++|||||...+...               .......+..|+..............        ....++.+|+
T Consensus        80 ~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (266)
T d1mxha_          80 RAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD  159 (266)
T ss_dssp             HHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECC
T ss_pred             HHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhh
Confidence               368999999998764321               11233455566666665555544321        2234556665


Q ss_pred             ceeeeccCCCCCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchH
Q 039049          126 CSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTL  202 (305)
Q Consensus       126 ~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~  202 (305)
                      .......+..                     ..|+.||...+.+.+.++.+.   |+++..+.||.+..+...     ..
T Consensus       160 ~~~~~~~~~~---------------------~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~-----~~  213 (266)
T d1mxha_         160 AMTDLPLPGF---------------------CVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAM-----PQ  213 (266)
T ss_dssp             GGGGSCCTTC---------------------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSS-----CH
T ss_pred             ccccccCcch---------------------hhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccC-----CH
Confidence            5432222111                     679999999999999888764   799999999998655322     12


Q ss_pred             HHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          203 LLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      ..........+  +   .+-+..++|+|.++++++....   .+..+.+.|.
T Consensus       214 ~~~~~~~~~~p--l---~r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG  260 (266)
T d1mxha_         214 ETQEEYRRKVP--L---GQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGG  260 (266)
T ss_dssp             HHHHHHHTTCT--T---TSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHhcCC--C---CCCCCCHHHHHHHHHHHhCchhCCccCCeEEECcc
Confidence            22333333222  1   1335789999999999997654   3445777543

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.65  E-value=2.4e-15  Score=122.94  Aligned_cols=220  Identities=12%  Similarity=0.055  Sum_probs=138.4

Q ss_pred             CcEEEeCCcc--hHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-------
Q 039049            2 PEYCVTGGTG--FIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-------   72 (305)
Q Consensus         2 ~~ilItG~~G--~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   72 (305)
                      |++|||||+|  .||++++++|++.|.+|++..|+..+..+  .+..  ....+...+++|+.+.++..++++       
T Consensus         7 K~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~--~~~~--~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~   82 (268)
T d2h7ma1           7 KRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQ--RITD--RLPAKAPLLELDVQNEEHLASLAGRVTEAIG   82 (268)
T ss_dssp             CEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHH--HHHT--TSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHH--HHHH--HcCCceeeEeeecccccccccccchhhhccc
Confidence            7899999754  59999999999999999999988653321  1111  123467889999999876555432       


Q ss_pred             ---CCCEEEEeccccccCC---------CCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCCCcc
Q 039049           73 ---GVDGVFHTASPVLVPY---------DNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYRHDAQQVSP  140 (305)
Q Consensus        73 ---~~d~Vi~~a~~~~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~  140 (305)
                         .+|+++|+|+......         +.+.+...+..|+.........+....+....+.++|.......+..     
T Consensus        83 ~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~p~~-----  157 (268)
T d2h7ma1          83 AGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAY-----  157 (268)
T ss_dssp             TTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCTTT-----
T ss_pred             cCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccccCccc-----
Confidence               4699999999653211         22334445666676777666666554222344444443322221111     


Q ss_pred             cCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCC----CCCC-ch---HHHH-HHH
Q 039049          141 LNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLA----PQPT-ST---LLLI-LAM  208 (305)
Q Consensus       141 ~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~----~~~~-~~---~~~~-~~~  208 (305)
                                      ..|+.+|...+.+.+.++.++   ++++..+.|+.+-.+...    .... ..   ...+ ...
T Consensus       158 ----------------~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (268)
T d2h7ma1         158 ----------------NWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGW  221 (268)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHH
T ss_pred             ----------------chhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHH
Confidence                            679999999999999888764   799999999988654210    0000 00   1111 111


Q ss_pred             HhcCCCCCCCCCccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          209 VKGLRGEYPNTTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       209 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      ....+.     .+.+..++|+|+++.+++....   .+..+.+.|.
T Consensus       222 ~~~~pl-----~rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG  262 (268)
T d2h7ma1         222 DQRAPI-----GWNMKDATPVAKTVCALLSDWLPATTGDIIYADGG  262 (268)
T ss_dssp             HHHCTT-----CCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTT
T ss_pred             HhcCCC-----CCCCCCHHHHHHHHHHHhCchhcCccCCEEEECcC
Confidence            122221     2447789999999999996433   2334666543

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.60  E-value=6.8e-14  Score=115.89  Aligned_cols=223  Identities=12%  Similarity=-0.005  Sum_probs=135.3

Q ss_pred             CcEEEeCCcc--hHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhh-------cc--CccCce-EEEEcc--C------
Q 039049            2 PEYCVTGGTG--FIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWE-------LN--GAEERL-KIMKAD--L------   61 (305)
Q Consensus         2 ~~ilItG~~G--~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~-------~~--~~~~~~-~~~~~D--~------   61 (305)
                      |++|||||+|  .||+++++.|++.|.+|++..|++...........       ..  ...... .....|  +      
T Consensus         9 K~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (297)
T d1d7oa_           9 KRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPEDV   88 (297)
T ss_dssp             CEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSGGGS
T ss_pred             CEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhccccccc
Confidence            7899999887  89999999999999999999886421111000000       00  000011 111222  1      


Q ss_pred             ------------CCcchHHHH-------hcCCCEEEEeccccccC------CCCchhhhhhhhhHHHHHHHHHHHHhcC-
Q 039049           62 ------------LMEGSFDEA-------IQGVDGVFHTASPVLVP------YDNNIQATLIDPCIKGTLNVLSSCKKAK-  115 (305)
Q Consensus        62 ------------~d~~~~~~~-------~~~~d~Vi~~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-  115 (305)
                                  .+....+++       +.++|++||+||.....      .+.+.+...+++|+.+...+.+++.... 
T Consensus        89 ~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~  168 (297)
T d1d7oa_          89 PEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMN  168 (297)
T ss_dssp             CHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE
T ss_pred             hhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHHHhh
Confidence                        222222332       33789999999975321      1455678899999999999998876541 


Q ss_pred             CccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHH----HcCCcEEEEecCceec
Q 039049          116 SVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAK----DCGIDMVVVNPSFVVG  191 (305)
Q Consensus       116 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~~i~Rp~~v~G  191 (305)
                      .-.+.+.+++.+.......              ..      ..|..+|...+.+.+.++.    .+++++..+.||.+..
T Consensus       169 ~~g~~~~~~~~~~~~~~~~--------------~~------~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T  228 (297)
T d1d7oa_         169 PGGASISLTYIASERIIPG--------------YG------GGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGS  228 (297)
T ss_dssp             EEEEEEEEECGGGTSCCTT--------------CT------TTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBC
T ss_pred             cCCcceeeeehhhcccccc--------------cc------cceecccccccccccccchhccccceEEecccccccccc
Confidence            1124555555442211100              00      5599999988877665543    4589999999999987


Q ss_pred             CCCCCCCCchHHHHHHHHhcCCCCCCCCCccceeHHHHHHHHHHhhcccc---cCceEEEecC
Q 039049          192 PLLAPQPTSTLLLILAMVKGLRGEYPNTTVGFVHIDDVVGAHILAMEETR---ASGRLICSSS  251 (305)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~~~~~~  251 (305)
                      +..... .....+........+      ...+...+|+|.++++++....   .+..+.+.|.
T Consensus       229 ~~~~~~-~~~~~~~~~~~~~~P------lgR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG  284 (297)
T d1d7oa_         229 RAAKAI-GFIDTMIEYSYNNAP------IQKTLTADEVGNAAAFLVSPLASAITGATIYVDNG  284 (297)
T ss_dssp             CCSSCC-SHHHHHHHHHHHHSS------SCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             hhhhhc-cCCHHHHHHHHhCCC------CCCCCCHHHHHHHHHHHhCchhcCCcCceEEECcC
Confidence            764321 222233333333332      3346889999999999997543   2344666543

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.55  E-value=1.7e-13  Score=110.95  Aligned_cols=214  Identities=20%  Similarity=0.210  Sum_probs=123.5

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHh--------c
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAI--------Q   72 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~--------~   72 (305)
                      ||.|+||||++.||++++++|++.|++|++++|+....                   ..|+.+.+......        .
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~-------------------~~d~~~~~~~~~~~~~~~~~~~~   61 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV-------------------IADLSTAEGRKQAIADVLAKCSK   61 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE-------------------ECCTTSHHHHHHHHHHHHTTCTT
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHHH-------------------HHHhcCHHHHHHHHHHHHHHhCC
Confidence            88999999999999999999999999999999875421                   23555543333221        2


Q ss_pred             CCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCCCcccC------
Q 039049           73 GVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSC----KKAKSVKRVVLTSSCSSIRYRHDAQQVSPLN------  142 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~------  142 (305)
                      .+|+++|+|+....   .+.......+|..+...+.+..    .+. .......+++..........   .+..      
T Consensus        62 ~id~lv~~Ag~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g  134 (257)
T d1fjha_          62 GMDGLVLCAGLGPQ---TKVLGNVVSVNYFGATELMDAFLPALKKG-HQPAAVVISSVASAHLAFDK---NPLALALEAG  134 (257)
T ss_dssp             CCSEEEECCCCCTT---CSSHHHHHHHHTHHHHHHHHHHHHHHHTS-SSCEEEEECCGGGGSSCGGG---CTTHHHHHHT
T ss_pred             CCcEEEEcCCCCCc---HHHHHHHHHHHHHHHHHHHHHhhhhhhhh-ccCcceeeeeccccchhhhh---hhhhhhccCC
Confidence            57999999987653   3344455677777776666543    222 33445555543321110000   0000      


Q ss_pred             ---------CCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEecCceecCCCCCCCCchHHHHHHHHh
Q 039049          143 ---------ESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKDC---GIDMVVVNPSFVVGPLLAPQPTSTLLLILAMVK  210 (305)
Q Consensus       143 ---------E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~Rp~~v~G~~~~~~~~~~~~~~~~~~~  210 (305)
                               ......+.     ...|+.+|...+.+.+.++.++   |+++..+.||.+-.+........ ........+
T Consensus       135 ~~~~i~s~~~~~~~~~~-----~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~-~~~~~~~~~  208 (257)
T d1fjha_         135 EEAKARAIVEHAGEQGG-----NLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQD-PRYGESIAK  208 (257)
T ss_dssp             CHHHHHHHHHTCCTTHH-----HHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------------------
T ss_pred             cEEEEeeehhccCCCcc-----hHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCC-HHHHHHHHh
Confidence                     00000010     1459999999999998887654   79999999999976643221110 001111111


Q ss_pred             cCCCCCCCCCccceeHHHHHHHHHHhhccccc---CceEEEecC
Q 039049          211 GLRGEYPNTTVGFVHIDDVVGAHILAMEETRA---SGRLICSSS  251 (305)
Q Consensus       211 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~~  251 (305)
                      .. .  |  ..-+...+|+|.++.+++.....   +..+.+.|.
T Consensus       209 ~~-~--P--lgR~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG  247 (257)
T d1fjha_         209 FV-P--P--MGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGG  247 (257)
T ss_dssp             CC-C--S--TTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             cC-C--C--CCCCcCHHHHHHHHHHHhCchhCCccCceEEeCCC
Confidence            10 0  1  33467899999999999975432   344666544

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.53  E-value=1.9e-13  Score=114.63  Aligned_cols=170  Identities=9%  Similarity=0.019  Sum_probs=112.2

Q ss_pred             CcEEEeC--CcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhh----------hccCccCceEEEE-----------
Q 039049            2 PEYCVTG--GTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLW----------ELNGAEERLKIMK-----------   58 (305)
Q Consensus         2 ~~ilItG--~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~~~~~-----------   58 (305)
                      |-+||||  ++..||+++++.|++.|.+|++..++...........          .............           
T Consensus         3 kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (329)
T d1uh5a_           3 DICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDI   82 (329)
T ss_dssp             CEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGGC
T ss_pred             cEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhccc
Confidence            5689999  5569999999999999999999877643211100000          0000000112222           


Q ss_pred             ---------ccCCCcchHHHHh-------cCCCEEEEeccccccC------CCCchhhhhhhhhHHHHHHHHHHHHhc-C
Q 039049           59 ---------ADLLMEGSFDEAI-------QGVDGVFHTASPVLVP------YDNNIQATLIDPCIKGTLNVLSSCKKA-K  115 (305)
Q Consensus        59 ---------~D~~d~~~~~~~~-------~~~d~Vi~~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~-~  115 (305)
                               +|+.+.+.+++++       .++|++||+||.....      ...+.+...+++|+.+...+.+++... +
T Consensus        83 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~  162 (329)
T d1uh5a_          83 DEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMK  162 (329)
T ss_dssp             CHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE
T ss_pred             chhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhcc
Confidence                     2444555555543       3789999999965431      134567888999999999998887654 1


Q ss_pred             CccEEEEeccceeeeccCCCCCCcccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH----cCCcEEEEecCceec
Q 039049          116 SVKRVVLTSSCSSIRYRHDAQQVSPLNESHWSDPDYCKHYNLWYAYAKTIAEKEAWRIAKD----CGIDMVVVNPSFVVG  191 (305)
Q Consensus       116 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~i~Rp~~v~G  191 (305)
                      .-.++|.+||.+.....+.              ..      ..|+.+|...+.+.+.++.+    +|+++..+.||.|-.
T Consensus       163 ~~GsIv~iss~~~~~~~p~--------------y~------~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T  222 (329)
T d1uh5a_         163 PQSSIISLTYHASQKVVPG--------------YG------GGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKS  222 (329)
T ss_dssp             EEEEEEEEECGGGTSCCTT--------------CT------TTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC
T ss_pred             cccccccceeehhcccccc--------------cc------hhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccc
Confidence            2357999988664322111              11      56999999999998887744    589999999998743

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.39  E-value=1.2e-13  Score=106.53  Aligned_cols=103  Identities=17%  Similarity=0.098  Sum_probs=77.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      |+|+||||+|.||+.+++.|++.|.+|+++.|+.++..........   ..++....+|+.|.+.+++++.++|+|||+|
T Consensus        24 K~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~iDilin~A  100 (191)
T d1luaa1          24 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNK---RFKVNVTAAETADDASRAEAVKGAHFVFTAG  100 (191)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH---HHTCCCEEEECCSHHHHHHHTTTCSEEEECC
T ss_pred             CEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHh---ccchhhhhhhcccHHHHHHHhcCcCeeeecC
Confidence            7899999999999999999999999999999997654433221111   2256778899999999999999999999999


Q ss_pred             cccccCCCCchhhhhhhhhHHHHHHH
Q 039049           82 SPVLVPYDNNIQATLIDPCIKGTLNV  107 (305)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~n~~~~~~l  107 (305)
                      +........+.+...++.|+.+..+.
T Consensus       101 g~g~~~~~~e~~~~~~~~nv~~~~~~  126 (191)
T d1luaa1         101 AIGLELLPQAAWQNESSIEIVADYNA  126 (191)
T ss_dssp             CTTCCCBCHHHHHTCTTCCEEEECCC
T ss_pred             ccccccCCHHHHHhhhcceeehhHhh
Confidence            97543334444444555555444433

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.68  E-value=3.9e-08  Score=70.26  Aligned_cols=71  Identities=20%  Similarity=0.174  Sum_probs=57.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHH-hcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEA-IQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~Vi~~   80 (305)
                      |+|+|+|+ |.+|+++++.|.+.|++|+++.++++.....   ...    .+..++.+|..|++.+.++ ++++|.++-+
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~---~~~----~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~   72 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKA---SAE----IDALVINGDCTKIKTLEDAGIEDADMYIAV   72 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHH----CSSEEEESCTTSHHHHHHTTTTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhh---hhh----hhhhhccCcccchhhhhhcChhhhhhhccc
Confidence            78999997 9999999999999999999998887643322   111    1568899999999998887 5688988865

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.57  E-value=2.2e-07  Score=66.94  Aligned_cols=114  Identities=16%  Similarity=0.117  Sum_probs=77.2

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCC--eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGH--MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ||.|+||+|.+|++++..|..+|.  ++.+++.++.+..   .+ .+.+.. .+.....- .......+.++++|+||.+
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~---a~-Dl~~~~-~~~~~~~~-~~~~~~~~~~~~aDivVit   75 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV---AA-DLSHIE-TRATVKGY-LGPEQLPDCLKGCDVVVIP   75 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH---HH-HHTTSS-SSCEEEEE-ESGGGHHHHHTTCSEEEEC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh---hH-HHhhhh-hhcCCCeE-EcCCChHHHhCCCCEEEEC
Confidence            799999999999999999998884  7888877543211   11 111111 11111111 2244567788999999999


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEecc
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSS  125 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS  125 (305)
                      ||.....  .....+.++.|+...+.+++.+.++ +.+-++.+-|
T Consensus        76 ag~~~~~--g~sR~~ll~~N~~i~~~i~~~i~~~-~p~~iiivvt  117 (144)
T d1mlda1          76 AGVPRKP--GMTRDDLFNTNATIVATLTAACAQH-CPDAMICIIS  117 (144)
T ss_dssp             CSCCCCT--TCCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEEECS
T ss_pred             CCcCCCC--CCCcchHHHHHHHHHHHHHHHHHhc-CCCeEEEEec
Confidence            9975433  2344558899999999999999998 5555555444

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.53  E-value=2.4e-07  Score=66.93  Aligned_cols=113  Identities=12%  Similarity=0.125  Sum_probs=72.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC--CeEEEEEeCCCcccc-hhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG--HMVRTTVRDPEDLSK-VGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      |||.|+|+ |.+|+.++..|+..|  .+|.++++++..... ...+..............+|.   +    .+.++|+||
T Consensus         6 ~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~----~~~~adivv   77 (146)
T d1ez4a1           6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---S----DCKDADLVV   77 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---G----GGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---H----HhccccEEE
Confidence            68999996 999999999999988  589999887643221 111221111122334444543   2    256899999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEecc
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSS  125 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS  125 (305)
                      .+|+.....  .....+....|+...+.+.+.+.+. +.+-++.+-|
T Consensus        78 itag~~~~~--g~~r~~l~~~N~~i~~~~~~~i~~~-~p~aivivvt  121 (146)
T d1ez4a1          78 ITAGAPQKP--GESRLDLVNKNLNILSSIVKPVVDS-GFDGIFLVAA  121 (146)
T ss_dssp             ECCCC------------CHHHHHHHHHHHHHHHHHT-TCCSEEEECS
T ss_pred             EecccccCC--CCCHHHHHHHHHHHHHHHHHHHhhc-CCCcEEEEeC
Confidence            999876543  2345557899999999999999988 5555554443

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.51  E-value=1.1e-06  Score=63.24  Aligned_cols=115  Identities=10%  Similarity=0.001  Sum_probs=75.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC--CeEEEEEeCCCccc---chhhhhhc-cCccCceEEEEccCCCcchHHHHhcCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG--HMVRTTVRDPEDLS---KVGFLWEL-NGAEERLKIMKADLLMEGSFDEAIQGVD   75 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~---~~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~d   75 (305)
                      |||.|+||+|.+|++++..|+..|  .++.++++++....   ....+... .....+.+....--.|.    +.++++|
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~----~~l~~aD   76 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENL----RIIDESD   76 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCG----GGGTTCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchH----HHhccce
Confidence            579999999999999999999988  48999988753211   11122221 11122233322111122    3467899


Q ss_pred             EEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEe
Q 039049           76 GVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLT  123 (305)
Q Consensus        76 ~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  123 (305)
                      +||-+||....+  .....+.++.|....+.+.+.+.+. +-+.++.+
T Consensus        77 vVVitAG~~~~~--g~sR~dl~~~Na~iv~~i~~~i~~~-~~~~iivV  121 (145)
T d1hyea1          77 VVIITSGVPRKE--GMSRMDLAKTNAKIVGKYAKKIAEI-CDTKIFVI  121 (145)
T ss_dssp             EEEECCSCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHH-CCCEEEEC
T ss_pred             EEEEecccccCC--CCChhhhhhhhHHHHHHHHHHHhcc-CCCeEEEE
Confidence            999999975533  2345568899999999999999888 54444433

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=98.40  E-value=6.2e-07  Score=63.95  Aligned_cols=72  Identities=19%  Similarity=0.209  Sum_probs=57.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHH-hcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEA-IQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~Vi~~   80 (305)
                      |+++|+|+ |-+|+++++.|.+.|++|+++..+++......        ......+.+|..+++.+.++ ++++|.||-+
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~--------~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~   71 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA--------SYATHAVIANATEENELLSLGIRNFEYVIVA   71 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT--------TTCSEEEECCTTCTTHHHHHTGGGCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH--------HhCCcceeeecccchhhhccCCccccEEEEE
Confidence            67999986 99999999999999999999988776433221        12457788999999998887 6789988855


Q ss_pred             cc
Q 039049           81 AS   82 (305)
Q Consensus        81 a~   82 (305)
                      .+
T Consensus        72 ~~   73 (134)
T d2hmva1          72 IG   73 (134)
T ss_dssp             CC
T ss_pred             cC
Confidence            43

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.36  E-value=3.6e-06  Score=60.39  Aligned_cols=114  Identities=18%  Similarity=0.100  Sum_probs=72.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHH-cC--CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLD-KG--HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~-~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      |||.|+|++|.+|++++-.|.. .+  .++..++..+......-.+.....   ....-.  ....... +.+++.|+||
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~---~~~~~~--~~~~~~~-~~~~~aDvvv   74 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPT---AVKIKG--FSGEDAT-PALEGADVVL   74 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCS---SCEEEE--ECSSCCH-HHHTTCSEEE
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCcc---ccCCcE--EEcCCCc-cccCCCCEEE
Confidence            6899999999999999988754 34  688888765321111111222111   111111  1122223 3577999999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccE-EEEec
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKR-VVLTS  124 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~v~~S  124 (305)
                      .+||....+  .....+.++.|....+.+.+.+.+. +.+. +|.+|
T Consensus        75 itaG~~~k~--g~~R~dl~~~N~~i~~~v~~~i~~~-~p~aivivvt  118 (145)
T d2cmda1          75 ISAGVRRKP--GMDRSDLFNVNAGIVKNLVQQVAKT-CPKACIGIIT  118 (145)
T ss_dssp             ECCSCCCCT--TCCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEEECS
T ss_pred             ECCCccCCC--CcchhhHHHHHHHHHHHHHHHHHhh-CCCcEEEEcc
Confidence            999986533  2344558899999999999999988 4343 45544

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.35  E-value=4.3e-07  Score=68.18  Aligned_cols=73  Identities=19%  Similarity=0.264  Sum_probs=55.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      |+|+|+|| |++|++++++|++.||+|++++|+.++.....   .   ..+.......+..+.......+...|.++.+.
T Consensus         3 K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~---~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~   75 (182)
T d1e5qa1           3 KSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLS---A---GVQHSTPISLDVNDDAALDAEVAKHDLVISLI   75 (182)
T ss_dssp             CEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHH---T---TCTTEEEEECCTTCHHHHHHHHTTSSEEEECS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHH---h---cccccccccccccchhhhHhhhhccceeEeec
Confidence            78999997 99999999999999999999999877544322   1   12244555566666677777888889888654

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.35  E-value=9.7e-07  Score=63.45  Aligned_cols=36  Identities=11%  Similarity=0.141  Sum_probs=29.1

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcC-C---eEEEEEeCCC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKG-H---MVRTTVRDPE   36 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g-~---~V~~~~r~~~   36 (305)
                      ||||.|+||||++|+.+++.|++.. +   +++++.++..
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s   40 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQL   40 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSST
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccc
Confidence            9999999999999999999887753 2   5666665543

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=98.31  E-value=1.1e-06  Score=66.05  Aligned_cols=81  Identities=16%  Similarity=0.084  Sum_probs=53.7

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      .|||.|+|+ |-+|..++..|++.|++|.+++|+++...............+.............++.+.++++|+||-+
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~   79 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV   79 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEE
Confidence            379999997 9999999999999999999999986544332221111111112222222222234577888999999987


Q ss_pred             cc
Q 039049           81 AS   82 (305)
Q Consensus        81 a~   82 (305)
                      ..
T Consensus        80 v~   81 (184)
T d1bg6a2          80 VP   81 (184)
T ss_dssp             SC
T ss_pred             Ec
Confidence            53

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=98.30  E-value=3.2e-06  Score=60.34  Aligned_cols=110  Identities=13%  Similarity=0.022  Sum_probs=72.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC--eEEEEEeCCCccc---chhhhhhccCccCceEEEEccCCCcchHHHHhcCCCE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH--MVRTTVRDPEDLS---KVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDG   76 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   76 (305)
                      .||.|+||+|.+|++++..|+.++.  ++.+++.......   ....+........+.....+|.   ++    +.++|+
T Consensus         1 sKV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~~----~~~aDi   73 (142)
T d1o6za1           1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---ED----TAGSDV   73 (142)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---GG----GTTCSE
T ss_pred             CeEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---HH----hhhcCE
Confidence            4799999999999999999999884  7888775322111   1112222111122344444443   22    568999


Q ss_pred             EEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEE
Q 039049           77 VFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVV  121 (305)
Q Consensus        77 Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v  121 (305)
                      ||-+||....+  .....+.++.|....+.+.+.+++. +.+-++
T Consensus        74 VvitaG~~~~~--g~~R~dl~~~N~~I~~~i~~~i~~~-~p~~i~  115 (142)
T d1o6za1          74 VVITAGIPRQP--GQTRIDLAGDNAPIMEDIQSSLDEH-NDDYIS  115 (142)
T ss_dssp             EEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHTT-CSCCEE
T ss_pred             EEEeccccccc--CCchhhHHHHHHHHHHHHHHHHHhc-CCCceE
Confidence            99999975433  2345668999999999999999988 444333

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=98.30  E-value=4.1e-06  Score=59.93  Aligned_cols=112  Identities=13%  Similarity=0.053  Sum_probs=70.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC--eEEEEEeCCCcccc-hhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH--MVRTTVRDPEDLSK-VGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      +||.|+|+ |.+|+.++-.|+.++.  ++.+++++++.... ...+..............+|   +    +.++++|+|+
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~---~----~~~~~adivv   73 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD---Y----SDVKDCDVIV   73 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C---G----GGGTTCSEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc---H----HHhCCCceEE
Confidence            68999997 9999999999999874  89999988764331 11222211112233332222   2    2367899999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccE-EEEec
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKR-VVLTS  124 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~v~~S  124 (305)
                      -+|+.....  .....+.+..|+.....+++.+.+. +.+- ++.+|
T Consensus        74 itag~~~~~--~~~r~~l~~~N~~i~~~i~~~i~~~-~p~ai~ivvt  117 (142)
T d1y6ja1          74 VTAGANRKP--GETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILVVS  117 (142)
T ss_dssp             ECCCC--------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEECS
T ss_pred             EecccccCc--CcchhHHhhHHHHHHHHHHHHhhcc-CCCceEEEec
Confidence            999976543  2345568899999999999999987 4443 44433

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.24  E-value=4.4e-06  Score=59.67  Aligned_cols=111  Identities=18%  Similarity=0.138  Sum_probs=72.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC--CeEEEEEeCCCcccc-hhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG--HMVRTTVRDPEDLSK-VGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      |||.|+|+ |.+|++++..|+.++  .++.++++++..... ...+........+......|   .+    .++++|+||
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~~----~~~~adivv   72 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---YA----DLKGSDVVI   72 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---GG----GGTTCSEEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---HH----HhcCCCEEE
Confidence            68999997 999999999998887  489998877543221 11111111112233433333   22    367899999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEe
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLT  123 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  123 (305)
                      -+|+.....  .....+.+..|....+.+++.+.+. +.+-++.+
T Consensus        73 itag~~~~~--g~~r~dl~~~N~~I~~~i~~~i~~~-~p~aiviv  114 (140)
T d1a5za1          73 VAAGVPQKP--GETRLQLLGRNARVMKEIARNVSKY-APDSIVIV  114 (140)
T ss_dssp             ECCCCCCCS--SCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEE
T ss_pred             EecccccCC--CcchhhhhccccchHHHHHHHHHhc-CCCcEEEE
Confidence            999876543  2334557888999999999999988 44444444

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.18  E-value=8.5e-06  Score=58.73  Aligned_cols=112  Identities=17%  Similarity=0.181  Sum_probs=73.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC--eEEEEEeCCCccc-chhhhhhccCc-cCceEEEEccCCCcchHHHHhcCCCEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH--MVRTTVRDPEDLS-KVGFLWELNGA-EERLKIMKADLLMEGSFDEAIQGVDGV   77 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~-~~~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~V   77 (305)
                      +||.|+|+ |.+|++++..|+.+|.  ++.+++++++... ....+...... ...+.....|.       +.++++|+|
T Consensus         7 ~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~-------~~l~daDvv   78 (148)
T d1ldna1           7 ARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY-------DDCRDADLV   78 (148)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG-------GGTTTCSEE
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH-------HHhccceeE
Confidence            47999997 9999999999999884  7999987764322 11112221111 12333333443       236689999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCcc-EEEEec
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVK-RVVLTS  124 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~S  124 (305)
                      |.+|+.....  .....+.+..|....+.+.+.++++ +.+ .++.+|
T Consensus        79 vitag~~~~~--~~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~~ivvt  123 (148)
T d1ldna1          79 VICAGANQKP--GETRLDLVDKNIAIFRSIVESVMAS-GFQGLFLVAT  123 (148)
T ss_dssp             EECCSCCCCT--TTCSGGGHHHHHHHHHHHHHHHHHH-TCCSEEEECS
T ss_pred             EEeccccccc--CcchhHHHHHHHHHHHHHHHHHHhh-CCCceEEEec
Confidence            9999976543  3334557899999999999999888 433 344433

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=98.09  E-value=1.2e-05  Score=57.65  Aligned_cols=113  Identities=13%  Similarity=0.074  Sum_probs=71.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC--CeEEEEEeCCCcccch-hhhhhc-cCccCceEEEEccCCCcchHHHHhcCCCEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG--HMVRTTVRDPEDLSKV-GFLWEL-NGAEERLKIMKADLLMEGSFDEAIQGVDGV   77 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~-~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~d~V   77 (305)
                      +||.|+|+ |.+|+.++..|+.+|  .++.++++++.+.... ..+... ............|   ++    .++++|+|
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d---~~----~l~~adiV   73 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---WA----ALADADVV   73 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---GG----GGTTCSEE
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC---HH----HhccccEE
Confidence            78999995 999999999999887  4888888765432211 112211 1111123333333   22    25789999


Q ss_pred             EEeccccccCC--CCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEe
Q 039049           78 FHTASPVLVPY--DNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLT  123 (305)
Q Consensus        78 i~~a~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  123 (305)
                      |-+||......  ......+.++.|....+.+.+.+++. +.+-++.+
T Consensus        74 VitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~-~p~aiviv  120 (146)
T d1hyha1          74 ISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKES-GFHGVLVV  120 (146)
T ss_dssp             EECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHT-TCCSEEEE
T ss_pred             EEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhc-CCCeEEEE
Confidence            99999765321  11223457788999999999999888 44444443

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=98.07  E-value=1.9e-05  Score=56.37  Aligned_cols=112  Identities=17%  Similarity=0.149  Sum_probs=73.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC--eEEEEEeCCCcccc-hhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH--MVRTTVRDPEDLSK-VGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      .||.|+|+ |.+|++++..|+.+|.  ++.++++++..... ...+...............+  +.    +.++++|+||
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~--~~----~~~~daDvVV   74 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD--DP----EICRDADMVV   74 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEES--CG----GGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCC--CH----HHhhCCcEEE
Confidence            47999996 9999999999999884  89999877643321 11122221112233333321  22    2366789999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEe
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLT  123 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  123 (305)
                      -+||.....  .....+.+..|....+.+.+.+++. +.+.++.+
T Consensus        75 itaG~~~~~--g~~R~dl~~~N~~i~~~i~~~i~~~-~p~ai~iv  116 (143)
T d1llda1          75 ITAGPRQKP--GQSRLELVGATVNILKAIMPNLVKV-APNAIYML  116 (143)
T ss_dssp             ECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEE
T ss_pred             EecccccCC--CCchhhhhhhhHHHHHHHHHHHHhh-CCCeEEEE
Confidence            999976533  2334558899999999999999888 54444433

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=98.06  E-value=2.2e-05  Score=56.82  Aligned_cols=118  Identities=17%  Similarity=0.056  Sum_probs=75.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccch-hhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKV-GFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~   79 (305)
                      +||.|+|+ |.+|+.++..|+..+. ++.+++.++...... ..+.........-..+.    .....+..++++|+|+-
T Consensus         8 ~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~----~~~~~~~~~~~adiVvi   82 (154)
T d1pzga1           8 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVR----AEYSYEAALTGADCVIV   82 (154)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEE----EECSHHHHHTTCSEEEE
T ss_pred             CcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEe----ccCchhhhhcCCCeEEE
Confidence            58999997 9999999998888884 888887776533211 11111100000001111    12234567889999999


Q ss_pred             eccccccCCC---CchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEecc
Q 039049           80 TASPVLVPYD---NNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSS  125 (305)
Q Consensus        80 ~a~~~~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS  125 (305)
                      +|+.......   .....+.+..|....+.+++.+.+. +.+-++.+-|
T Consensus        83 tag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~-~p~aiviivs  130 (154)
T d1pzga1          83 TAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKY-CPKTFIIVVT  130 (154)
T ss_dssp             CCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEECC
T ss_pred             ecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhc-CCCcEEEEeC
Confidence            9987654321   1234557889999999999999988 5555555444

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.03  E-value=1.2e-06  Score=66.86  Aligned_cols=38  Identities=26%  Similarity=0.329  Sum_probs=34.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCccc
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLS   39 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~   39 (305)
                      |||.|+||+|.+|++|++.|++.||+|++.+|++++..
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~   38 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAE   38 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence            67999999999999999999999999999999876543

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=98.02  E-value=1.9e-05  Score=56.47  Aligned_cols=111  Identities=15%  Similarity=-0.003  Sum_probs=72.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC--CeEEEEEeCCCcccchh-hhhhc-cCccCceEEEEccCCCcchHHHHhcCCCEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG--HMVRTTVRDPEDLSKVG-FLWEL-NGAEERLKIMKADLLMEGSFDEAIQGVDGV   77 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~~~-~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~d~V   77 (305)
                      |||.|+|+ |.+|++++..|+..|  .++.++++++....... .+... .....+..+...  .|.    +.++++|+|
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~----~~~~dadvv   73 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDY----ADTANSDIV   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCG----GGGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCH----HHhcCCeEE
Confidence            67999996 999999999999987  58999988876433211 11110 000112333322  222    236789999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEE
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVL  122 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~  122 (305)
                      +-+||.....  .....+.++.|....+.+++.+.+. +.+-++.
T Consensus        74 vitag~~~~~--g~~r~~l~~~N~~i~~~i~~~i~~~-~p~aivi  115 (142)
T d1guza1          74 IITAGLPRKP--GMTREDLLMKNAGIVKEVTDNIMKH-SKNPIII  115 (142)
T ss_dssp             EECCSCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHH-CSSCEEE
T ss_pred             EEEEecCCCC--CCchHHHHHHHHHHHHHHHHHhhcc-CCCeEEE
Confidence            9999875533  2334567899999999999999887 4343443

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.00  E-value=1.7e-05  Score=56.61  Aligned_cols=113  Identities=13%  Similarity=0.051  Sum_probs=72.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC--CeEEEEEeCCCcccc-hhhhhhcc-CccCceEEEE-ccCCCcchHHHHhcCCCE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG--HMVRTTVRDPEDLSK-VGFLWELN-GAEERLKIMK-ADLLMEGSFDEAIQGVDG   76 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g--~~V~~~~r~~~~~~~-~~~~~~~~-~~~~~~~~~~-~D~~d~~~~~~~~~~~d~   76 (305)
                      |||.|+|+ |.+|.+++..|+.+|  .++.+++++++.... ...+.... .......... .|.       +.++++|+
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~-------~~~~~adi   72 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY-------SLLKGSEI   72 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCG-------GGGTTCSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCH-------HHhccccE
Confidence            68999996 999999999999887  479999877643221 11121111 0011122222 232       24678999


Q ss_pred             EEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEecc
Q 039049           77 VFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSS  125 (305)
Q Consensus        77 Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS  125 (305)
                      ||-.|+.....  .....+.+..|......+.+.+++. +.+-++.+-|
T Consensus        73 Vvitag~~~~~--g~~r~~l~~~n~~i~~~i~~~i~~~-~p~aivivvt  118 (142)
T d1ojua1          73 IVVTAGLARKP--GMTRLDLAHKNAGIIKDIAKKIVEN-APESKILVVT  118 (142)
T ss_dssp             EEECCCCCCCS--SCCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEECS
T ss_pred             EEEeccccCCC--CCchHHHHHHhhHHHHHHHHHHHhh-CCCcEEEEec
Confidence            99999865543  3345568889999999999999888 4444444433

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.99  E-value=4.2e-06  Score=61.76  Aligned_cols=37  Identities=27%  Similarity=0.372  Sum_probs=33.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCccc
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLS   39 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~   39 (305)
                      |||+|+|+ |.+|+.++..|++.|++|+++.|++....
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~   37 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYC   37 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhh
Confidence            78999997 99999999999999999999999887544

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.98  E-value=1.1e-05  Score=60.35  Aligned_cols=79  Identities=14%  Similarity=0.177  Sum_probs=50.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhc-cCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWEL-NGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      |+|.|+|+ |-.|.+++..|+++|++|++.+|..+... ...+... ....-.......++.-.+++.++++++|+||.+
T Consensus         1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~-~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~a   78 (180)
T d1txga2           1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEI-LKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLG   78 (180)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHH-HHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHH-HHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhcc
Confidence            78999996 99999999999999999999988643211 1111110 000001111112233356788899999999976


Q ss_pred             cc
Q 039049           81 AS   82 (305)
Q Consensus        81 a~   82 (305)
                      ..
T Consensus        79 vp   80 (180)
T d1txga2          79 VS   80 (180)
T ss_dssp             SC
T ss_pred             cc
Confidence            54

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.97  E-value=5.4e-05  Score=55.91  Aligned_cols=115  Identities=16%  Similarity=0.084  Sum_probs=69.9

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcC-----C--eEEEEEeCCCcccchhhhhh-ccC-ccCceEEEEccCCCcchHHHHhcC
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKG-----H--MVRTTVRDPEDLSKVGFLWE-LNG-AEERLKIMKADLLMEGSFDEAIQG   73 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g-----~--~V~~~~r~~~~~~~~~~~~~-~~~-~~~~~~~~~~D~~d~~~~~~~~~~   73 (305)
                      ||.|+||+|.||.+++-.|++.+     .  .+..+..+... .....+.. ... ..+....+..    .....+.+++
T Consensus        26 kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~-~~l~g~~mdl~d~a~~~~~~~~~----~~~~~~~~~~  100 (175)
T d7mdha1          26 NIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSF-QALEGVAMELEDSLYPLLREVSI----GIDPYEVFED  100 (175)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGH-HHHHHHHHHHHTTTCTTEEEEEE----ESCHHHHTTT
T ss_pred             EEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCcccc-chhcchhhhhcccccccccCccc----cccchhhccC
Confidence            69999999999999999998742     1  33344333211 11111110 111 0111222221    2235677889


Q ss_pred             CCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCC-ccEEEEec
Q 039049           74 VDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKS-VKRVVLTS  124 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~S  124 (305)
                      +|+||-.||....+  .....+.++.|....+.+.+++.+... -.+++.+|
T Consensus       101 aDvVvi~ag~~rkp--g~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1         101 VDWALLIGAKPRGP--GMERAALLDINGQIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             CSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             CceEEEeeccCCCC--CCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence            99999999886533  445556889999999999999988622 22455554

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.92  E-value=1e-05  Score=58.00  Aligned_cols=34  Identities=21%  Similarity=0.250  Sum_probs=27.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC---eEEEEEeCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH---MVRTTVRDP   35 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~---~V~~~~r~~   35 (305)
                      |||.|+||||++|+.|++.|.+++|   ++..+..+.
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~   39 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAE   39 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecc
Confidence            6899999999999999999986654   676665443

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.92  E-value=1.8e-05  Score=59.24  Aligned_cols=83  Identities=14%  Similarity=0.078  Sum_probs=61.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ++|+|+|+ |..|++++..|.+.|. ++++++|+++...+...+...............|+.+.+.+...+.++|+|||+
T Consensus        19 k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~diiIN~   97 (182)
T d1vi2a1          19 KTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNG   97 (182)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEEEC
T ss_pred             CEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhcccceeccc
Confidence            68999996 8999999999999985 799999988765543332221111123445567888888888888899999999


Q ss_pred             ccccc
Q 039049           81 ASPVL   85 (305)
Q Consensus        81 a~~~~   85 (305)
                      .....
T Consensus        98 Tp~G~  102 (182)
T d1vi2a1          98 TKVGM  102 (182)
T ss_dssp             SSTTS
T ss_pred             cCCcc
Confidence            87654

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=97.91  E-value=1.7e-06  Score=65.33  Aligned_cols=80  Identities=15%  Similarity=0.149  Sum_probs=52.3

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      |+||+|+|| |-.|++++..|+++|++|++..|+++.......-...+...+++.. .-++.-..++.++++++|+||-+
T Consensus         7 m~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l-~~~i~~t~~l~~a~~~ad~iiia   84 (189)
T d1n1ea2           7 LNKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQL-ASNITFTSDVEKAYNGAEIILFV   84 (189)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBC-CTTEEEESCHHHHHTTCSCEEEC
T ss_pred             eceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhccccccccccccc-ccccccchhhhhccCCCCEEEEc
Confidence            678999996 9999999999999999999999976533322111111111112211 11222234588889999999976


Q ss_pred             cc
Q 039049           81 AS   82 (305)
Q Consensus        81 a~   82 (305)
                      ..
T Consensus        85 vP   86 (189)
T d1n1ea2          85 IP   86 (189)
T ss_dssp             SC
T ss_pred             Cc
Confidence            53

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.91  E-value=5.9e-05  Score=54.69  Aligned_cols=112  Identities=13%  Similarity=0.027  Sum_probs=73.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC--eEEEEEeCCCccc-chhhhhhccCc-cCceEEEEccCCCcchHHHHhcCCCEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH--MVRTTVRDPEDLS-KVGFLWELNGA-EERLKIMKADLLMEGSFDEAIQGVDGV   77 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~-~~~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~V   77 (305)
                      +||.|+|+ |.+|+.++..|+.+|.  ++.+++++++... ....+...... ........+|..       .++++|+|
T Consensus        21 ~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~-------~~~~adiV   92 (160)
T d1i0za1          21 NKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYS-------VTANSKIV   92 (160)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGG-------GGTTCSEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchh-------hcccccEE
Confidence            58999996 9999999999999985  8999987754332 11112211111 112222223332       26689999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccE-EEEec
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKR-VVLTS  124 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~v~~S  124 (305)
                      |..||.....  .....+.++.|+...+.++..+++. +.+- ++.+|
T Consensus        93 VitAg~~~~~--g~tR~~l~~~N~~i~~~i~~~i~~~-~p~aiiivvt  137 (160)
T d1i0za1          93 VVTAGVRQQE--GESRLNLVQRNVNVFKFIIPQIVKY-SPDCIIIVVS  137 (160)
T ss_dssp             EECCSCCCCT--TCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEECS
T ss_pred             EEecCCcccc--CcchHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEeC
Confidence            9999986543  2344568899999999999999988 4443 44444

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=97.90  E-value=1.8e-05  Score=56.49  Aligned_cols=94  Identities=14%  Similarity=0.119  Sum_probs=53.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC-C---eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG-H---MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGV   77 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g-~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~V   77 (305)
                      |||.|+||||++|+.|++.|++.. |   ++..++.+......       +....... ...+..+    ...++++|+|
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~-------~~~~~~~~-~~~~~~~----~~~~~~~Dvv   68 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPA-------PNFGKDAG-MLHDAFD----IESLKQLDAV   68 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBC-------CCSSSCCC-BCEETTC----HHHHTTCSEE
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccc-------cccCCcce-eeecccc----hhhhccccEE
Confidence            579999999999999999888643 3   55555443321111       00000000 0111122    2346789999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCcc-EEEEeccc
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVK-RVVLTSSC  126 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~SS~  126 (305)
                      |.|.....                  +..+...+.+. +.+ .+|=.||.
T Consensus        69 F~alp~~~------------------s~~~~~~l~~~-g~~~~VIDlSsd   99 (147)
T d1mb4a1          69 ITCQGGSY------------------TEKVYPALRQA-GWKGYWIDAAST   99 (147)
T ss_dssp             EECSCHHH------------------HHHHHHHHHHT-TCCSEEEESSST
T ss_pred             EEecCchH------------------HHHHhHHHHHc-CCceEEEeCCcc
Confidence            98864422                  44555566666 654 46666664

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.89  E-value=1.1e-05  Score=60.29  Aligned_cols=32  Identities=19%  Similarity=0.298  Sum_probs=27.5

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcC-CeEEEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKG-HMVRTTV   32 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~   32 (305)
                      |+||.|+|||||+|+.|++.|.+.. .++..+.
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~   33 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALT   33 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCceEeeE
Confidence            9999999999999999999999874 4666554

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.88  E-value=5.2e-05  Score=54.90  Aligned_cols=117  Identities=15%  Similarity=0.043  Sum_probs=69.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC----e-E-EEEEeCCCcccchhhhhh-cc-CccCceEEEEccCCCcchHHHHhcC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH----M-V-RTTVRDPEDLSKVGFLWE-LN-GAEERLKIMKADLLMEGSFDEAIQG   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~----~-V-~~~~r~~~~~~~~~~~~~-~~-~~~~~~~~~~~D~~d~~~~~~~~~~   73 (305)
                      +||.|+||+|++|++++..|+..+.    . + +-+............... .. ........+..    .....+.+++
T Consensus         5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~   80 (154)
T d1y7ta1           5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEA----TDDPKVAFKD   80 (154)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE----ESCHHHHTTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhcccccccccccc----CCchhhhccc
Confidence            3899999999999999999987653    1 1 111112212222111111 11 11112223332    2234577889


Q ss_pred             CCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCc-cEEEEec
Q 039049           74 VDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSV-KRVVLTS  124 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~v~~S  124 (305)
                      +|+||-+||....+  .....+.+..|+...+.+.+.+.+...- ..++.+|
T Consensus        81 advViitaG~~~~p--g~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          81 ADYALLVGAAPRKA--GMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             CSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             ccEEEeecCcCCCC--CCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence            99999999986543  3345557899999999999999886221 2344444

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=97.87  E-value=3.8e-05  Score=52.10  Aligned_cols=66  Identities=9%  Similarity=0.073  Sum_probs=53.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi   78 (305)
                      .||.|+|| |.+|+-++....+.|++|++++.+++.....  +        --.++.+|+.|.+.+.+...  ++|+|-
T Consensus        12 ~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~~--v--------a~~~i~~~~~d~~~l~~~~~~~~~DviT   79 (111)
T d1kjqa2          12 TRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAMH--V--------AHRSHVINMLDGDALRRVVELEKPHYIV   79 (111)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGGG--G--------SSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchhh--c--------CCeEEECCCCCHHHHHHHHHhhCCceEE
Confidence            57999996 9999999999999999999998887643321  0        22678899999999888774  678886

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.84  E-value=2.6e-05  Score=56.43  Aligned_cols=37  Identities=16%  Similarity=0.253  Sum_probs=34.1

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCc
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPED   37 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~   37 (305)
                      |+||.|+||.|.+|+.+++.|.+.||+|.+.+|+...
T Consensus         9 ~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~   45 (152)
T d2pv7a2           9 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA   45 (152)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG
T ss_pred             CCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccccc
Confidence            6899999999999999999999999999999887653

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.82  E-value=9.7e-05  Score=53.36  Aligned_cols=74  Identities=19%  Similarity=0.239  Sum_probs=56.5

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHH-hcCCCEEEEec
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEA-IQGVDGVFHTA   81 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~Vi~~a   81 (305)
                      +|+|+|. |-+|..+++.|.+.|++|+++..+++.....  .....  ..++.++.+|..|++.++++ +++++.||-+.
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~--~~~~~--~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~   79 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQ--LEQRL--GDNADVIPGDSNDSSVLKKAGIDRCRAILALS   79 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHH--HHHHH--CTTCEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHH--HHHhh--cCCcEEEEccCcchHHHHHhccccCCEEEEcc
Confidence            5899996 9999999999999999999998876532211  11111  23789999999999988876 46889998663

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.82  E-value=6e-05  Score=53.70  Aligned_cols=111  Identities=14%  Similarity=0.086  Sum_probs=67.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccc-hhhhhhccC-ccCceEEE-EccCCCcchHHHHhcCCCEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSK-VGFLWELNG-AEERLKIM-KADLLMEGSFDEAIQGVDGV   77 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~-~~~~~~~~~-~~~~~~~~-~~D~~d~~~~~~~~~~~d~V   77 (305)
                      +||.|+|+ |.+|++++-.|+.++. ++.+++.+++.... ...+..... ......+. ..|..       .+.+.|+|
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~-------~~~~advv   73 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYA-------DTANSDVI   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGG-------GGTTCSEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHH-------HhcCCCEE
Confidence            68999996 9999999999988874 88888876653321 111111100 01112222 12222       25678999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEe
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLT  123 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  123 (305)
                      |-+||.....  .....+.+..|....+.+++.+.+. +.+-++.+
T Consensus        74 vitag~~~~~--~~~r~dl~~~N~~i~~~i~~~i~k~-~p~aiviv  116 (142)
T d1uxja1          74 VVTSGAPRKP--GMSREDLIKVNADITRACISQAAPL-SPNAVIIM  116 (142)
T ss_dssp             EECCSCC-----------CHHHHHHHHHHHHHHHGGG-CTTCEEEE
T ss_pred             EEeeeccCCc--CcchhHHHhHHHHHHHHHHHHHhcc-CCCceEEE
Confidence            9999976532  2334457889999999999999887 44444444

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.80  E-value=1.1e-05  Score=59.43  Aligned_cols=35  Identities=29%  Similarity=0.375  Sum_probs=31.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCc
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPED   37 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~   37 (305)
                      |||.|+|. |.+|+.+++.|.+.|++|++.+|+++.
T Consensus         1 MkI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~   35 (165)
T d2f1ka2           1 MKIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQST   35 (165)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchH
Confidence            67999985 999999999999999999999988654

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.74  E-value=1.9e-05  Score=58.43  Aligned_cols=34  Identities=21%  Similarity=0.284  Sum_probs=28.3

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcC-CeEEEEEeC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKG-HMVRTTVRD   34 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~r~   34 (305)
                      |+||.|+||||++|+.|++.|++.. .++..+..+
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~   35 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSR   35 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECS
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeecc
Confidence            8999999999999999999998754 366666543

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.74  E-value=5.8e-05  Score=54.68  Aligned_cols=112  Identities=16%  Similarity=0.105  Sum_probs=71.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC--eEEEEEeCCCccc-chhhhhhccCccCceEEE-EccCCCcchHHHHhcCCCEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH--MVRTTVRDPEDLS-KVGFLWELNGAEERLKIM-KADLLMEGSFDEAIQGVDGV   77 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~-~~D~~d~~~~~~~~~~~d~V   77 (305)
                      .||.|+|+ |.+|.+++..|...|.  ++.+++++++... ....+.........-..+ ..|..       .+.++|+|
T Consensus        20 ~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~-------~~~~adiv   91 (159)
T d2ldxa1          20 CKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYN-------VSANSKLV   91 (159)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGG-------GGTTEEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchh-------hhccccEE
Confidence            47999996 9999999999999885  8999987654322 111222211111112222 23322       25688999


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCcc-EEEEec
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVK-RVVLTS  124 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~S  124 (305)
                      |.+||..... . ....+.++.|+...+.+...+.+. +.+ .++.+|
T Consensus        92 vitag~~~~~-~-~~R~dll~~N~~i~~~i~~~i~~~-~p~~ivivvt  136 (159)
T d2ldxa1          92 IITAGARMVS-G-QTRLDLLQRNVAIMKAIVPGVIQN-SPDCKIIVVT  136 (159)
T ss_dssp             EECCSCCCCT-T-TCSSCTTHHHHHHHHHHTTTHHHH-STTCEEEECS
T ss_pred             EEecccccCC-C-CCHHHHHHHHHHHHHHHHHHHhcc-CCCeEEEEeC
Confidence            9999876644 2 333457889999999999888877 433 344444

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.72  E-value=2.5e-05  Score=56.89  Aligned_cols=72  Identities=17%  Similarity=0.115  Sum_probs=53.1

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEE
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFH   79 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~   79 (305)
                      +++|||+|+ |-+|+.+++.|.+.|. ++++.+|+.++......   ..    +..     ..+.+++.+.+.++|+||.
T Consensus        24 ~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~---~~----~~~-----~~~~~~~~~~l~~~Divi~   90 (159)
T d1gpja2          24 DKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELAR---DL----GGE-----AVRFDELVDHLARSDVVVS   90 (159)
T ss_dssp             TCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH---HH----TCE-----ECCGGGHHHHHHTCSEEEE
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHH---hh----hcc-----cccchhHHHHhccCCEEEE
Confidence            478999997 9999999999999997 69999988654433221   11    112     2345578888899999999


Q ss_pred             eccccc
Q 039049           80 TASPVL   85 (305)
Q Consensus        80 ~a~~~~   85 (305)
                      +.+...
T Consensus        91 atss~~   96 (159)
T d1gpja2          91 ATAAPH   96 (159)
T ss_dssp             CCSSSS
T ss_pred             ecCCCC
Confidence            987644

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.70  E-value=4.7e-05  Score=56.37  Aligned_cols=74  Identities=15%  Similarity=0.093  Sum_probs=48.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCC-cchHHHHh--cCCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLM-EGSFDEAI--QGVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~--~~~d~Vi   78 (305)
                      .+|||+||+|-+|+..++.+...|.+|++.++++++......+      ..... +  |-.+ .++..+..  +++|+||
T Consensus        33 ~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~l------Ga~~v-i--~~~~~~~~~~~~~~~~gvD~vi  103 (176)
T d1xa0a2          33 GPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVL------GAKEV-L--AREDVMAERIRPLDKQRWAAAV  103 (176)
T ss_dssp             CCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHT------TCSEE-E--ECC---------CCSCCEEEEE
T ss_pred             CEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhc------cccee-e--ecchhHHHHHHHhhccCcCEEE
Confidence            4699999999999999999989999999999988765433322      11111 1  2111 11122222  2789999


Q ss_pred             Eecccc
Q 039049           79 HTASPV   84 (305)
Q Consensus        79 ~~a~~~   84 (305)
                      ++.+-.
T Consensus       104 d~vgg~  109 (176)
T d1xa0a2         104 DPVGGR  109 (176)
T ss_dssp             ECSTTT
T ss_pred             EcCCch
Confidence            998753

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.70  E-value=2e-05  Score=60.02  Aligned_cols=82  Identities=17%  Similarity=0.149  Sum_probs=49.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCce-EE-----EEccCCCcchHHHHhcCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERL-KI-----MKADLLMEGSFDEAIQGVD   75 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~-----~~~D~~d~~~~~~~~~~~d   75 (305)
                      |||.|+| .||+|..++..|++.|++|++++.+.+.......-.. +...+.. +.     ....+.-..++.++++++|
T Consensus         1 MkI~ViG-lG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~g~~-p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~d   78 (202)
T d1mv8a2           1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKS-PIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSD   78 (202)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCC-SSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCS
T ss_pred             CEEEEEC-CCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhcccCC-cccchhhhhhhhhhhcccccccCCCHHHHHhhCC
Confidence            6799997 5999999999999999999999876542221110000 0000000 00     0001111334667778899


Q ss_pred             EEEEeccccc
Q 039049           76 GVFHTASPVL   85 (305)
Q Consensus        76 ~Vi~~a~~~~   85 (305)
                      +++-|.+...
T Consensus        79 ~i~i~VpTP~   88 (202)
T d1mv8a2          79 VSFICVGTPS   88 (202)
T ss_dssp             EEEECCCCCB
T ss_pred             EEEEecCccc
Confidence            9999988754

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.65  E-value=2e-05  Score=57.72  Aligned_cols=67  Identities=19%  Similarity=0.212  Sum_probs=48.8

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      |+||.|+| .|.+|+.+++.|++.||+|.+.+|++++.......        .       ........+++..+|+|+-+
T Consensus         1 M~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~--------~-------~~~~~~~~e~~~~~diii~~   64 (162)
T d3cuma2           1 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAA--------G-------ASAARSARDAVQGADVVISM   64 (162)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHT--------T-------CEECSSHHHHHTSCSEEEEC
T ss_pred             CCEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhh--------h-------ccccchhhhhccccCeeeec
Confidence            89999998 69999999999999999999999886543322111        0       11122356777788988877


Q ss_pred             ccc
Q 039049           81 ASP   83 (305)
Q Consensus        81 a~~   83 (305)
                      ...
T Consensus        65 v~~   67 (162)
T d3cuma2          65 LPA   67 (162)
T ss_dssp             CSC
T ss_pred             ccc
Confidence            643

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.65  E-value=2.9e-05  Score=56.29  Aligned_cols=116  Identities=16%  Similarity=0.065  Sum_probs=68.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC-----C--eEEEEEeCCCcccchhhhhh--ccCccCceEEEEccCCCcchHHHHhc
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG-----H--MVRTTVRDPEDLSKVGFLWE--LNGAEERLKIMKADLLMEGSFDEAIQ   72 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g-----~--~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~~~D~~d~~~~~~~~~   72 (305)
                      +||.|+||+|.+|++++-.|++.+     .  ++..+..+.. ......+..  ..........+..    .....+.++
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~-~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~   78 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPM-MGVLDGVLMELQDCALPLLKDVIA----TDKEEIAFK   78 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGG-HHHHHHHHHHHHHTCCTTEEEEEE----ESCHHHHTT
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccc-hhhhhhhhhhhccccccccccccc----CcccccccC
Confidence            589999999999999999998653     1  2333322221 112122211  0111112222222    122456788


Q ss_pred             CCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCcc-EEEEec
Q 039049           73 GVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVK-RVVLTS  124 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~S  124 (305)
                      ++|+||-++|.....  .....+.++.|....+.+.+.+.+..+-. .++.+|
T Consensus        79 ~~dvVVitag~~~~~--g~sr~dll~~N~~i~k~~~~~i~k~a~~~~~iivvs  129 (154)
T d5mdha1          79 DLDVAILVGSMPRRD--GMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVG  129 (154)
T ss_dssp             TCSEEEECCSCCCCT--TCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             CceEEEEecccCCCC--CCchhHHHHHhHHHHHHHHHHHHhhCCCceEEEEec
Confidence            999999999886643  22334478999999999999987752322 344444

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.64  E-value=0.00027  Score=50.58  Aligned_cols=115  Identities=16%  Similarity=0.063  Sum_probs=72.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC-CeEEEEEeCCCcccch-hhhhhccC-ccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG-HMVRTTVRDPEDLSKV-GFLWELNG-AEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~-~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      +||.|+|+ |.+|++++..|...+ .++.+++++++..... ..+..... ...+......+  +.    +.++++|+||
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~----~~~~~advvv   76 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TY----DDLAGADVVI   76 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CG----GGGTTCSEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cc----cccCCCcEEE
Confidence            58999996 999999998777776 4888888876543311 11111100 01122233221  22    2356889999


Q ss_pred             EeccccccCC-C--CchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEec
Q 039049           79 HTASPVLVPY-D--NNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS  124 (305)
Q Consensus        79 ~~a~~~~~~~-~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  124 (305)
                      -+|+...... +  .......+..|....+.+.+.+++. +.+-++.+-
T Consensus        77 itag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~-~p~aivivv  124 (150)
T d1t2da1          77 VTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKN-CPNAFIIVV  124 (150)
T ss_dssp             ECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEEEC
T ss_pred             EecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhc-CCCeEEEEe
Confidence            9999765331 1  1234567899999999999999988 544444443

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=97.62  E-value=0.00012  Score=51.11  Aligned_cols=87  Identities=16%  Similarity=0.173  Sum_probs=58.5

Q ss_pred             CcEEEeCCc---chHHHHHHHHHHHcC-CeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEE
Q 039049            2 PEYCVTGGT---GFIAAHLVKALLDKG-HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGV   77 (305)
Q Consensus         2 ~~ilItG~~---G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~V   77 (305)
                      ++|.|+|++   +..|..+.+.|.+.| ++|+.+..+.....             ++.. .-++.      ++-..+|.+
T Consensus         9 ksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~-------------G~~~-y~sl~------dlp~~vDlv   68 (129)
T d2csua1           9 KGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQ-------------GVKA-YKSVK------DIPDEIDLA   68 (129)
T ss_dssp             SEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEET-------------TEEC-BSSTT------SCSSCCSEE
T ss_pred             CeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccC-------------CeEe-ecchh------hcCCCCceE
Confidence            579999998   999999999987766 68998854432110             1111 11333      333468998


Q ss_pred             EEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccce
Q 039049           78 FHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCS  127 (305)
Q Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  127 (305)
                      +-+.....                  +..+++.|.+. |++.++.+|+..
T Consensus        69 vi~vp~~~------------------~~~~~~~~~~~-g~~~~vi~s~Gf   99 (129)
T d2csua1          69 IIVVPKRF------------------VKDTLIQCGEK-GVKGVVIITAGF   99 (129)
T ss_dssp             EECSCHHH------------------HHHHHHHHHHH-TCCEEEECCCSS
T ss_pred             EEecChHH------------------hHHHHHHHHHc-CCCEEEEecccc
Confidence            86653311                  55677888888 999999988754

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.60  E-value=3e-05  Score=57.97  Aligned_cols=73  Identities=19%  Similarity=0.127  Sum_probs=49.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcch---HHHHh--cCCCE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGS---FDEAI--QGVDG   76 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~---~~~~~--~~~d~   76 (305)
                      .+|||+||+|-+|...++.+...|.+|+++++++++.+   .+...     +...+ .|..+.+.   +.+..  +++|+
T Consensus        27 ~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~---~l~~~-----Ga~~v-i~~~~~~~~~~v~~~t~~~g~d~   97 (183)
T d1pqwa_          27 ERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKRE---MLSRL-----GVEYV-GDSRSVDFADEILELTDGYGVDV   97 (183)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH---HHHTT-----CCSEE-EETTCSTHHHHHHHHTTTCCEEE
T ss_pred             CEEEEECCCCCcccccchhhccccccceeeeccccccc---ccccc-----ccccc-ccCCccCHHHHHHHHhCCCCEEE
Confidence            47999999999999999999899999999998765332   22211     22222 24444433   33332  36899


Q ss_pred             EEEeccc
Q 039049           77 VFHTASP   83 (305)
Q Consensus        77 Vi~~a~~   83 (305)
                      ||++.+.
T Consensus        98 v~d~~g~  104 (183)
T d1pqwa_          98 VLNSLAG  104 (183)
T ss_dssp             EEECCCT
T ss_pred             EEecccc
Confidence            9999874

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.60  E-value=5e-05  Score=56.08  Aligned_cols=72  Identities=19%  Similarity=0.129  Sum_probs=48.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      ++|+|+||+|-+|...++.+...|.+|+++++++++......+        ++..+ .|..+.........++|+||++.
T Consensus        29 ~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~l--------Ga~~~-i~~~~~~~~~~~~~g~D~v~d~~   99 (171)
T d1iz0a2          29 EKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLAL--------GAEEA-ATYAEVPERAKAWGGLDLVLEVR   99 (171)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHT--------TCSEE-EEGGGHHHHHHHTTSEEEEEECS
T ss_pred             CEEEEEeccccchhhhhhhhccccccccccccccccccccccc--------cccee-eehhhhhhhhhcccccccccccc
Confidence            5799999999999999999989999999999886544322221        22222 13322222222335799999987


Q ss_pred             c
Q 039049           82 S   82 (305)
Q Consensus        82 ~   82 (305)
                      |
T Consensus       100 G  100 (171)
T d1iz0a2         100 G  100 (171)
T ss_dssp             C
T ss_pred             c
Confidence            6

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.58  E-value=4.4e-05  Score=56.56  Aligned_cols=73  Identities=12%  Similarity=0.086  Sum_probs=49.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHH---hc--CCCE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEA---IQ--GVDG   76 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~---~~--~~d~   76 (305)
                      .+|||+||+|-+|...++.+...|.+|+++++++++...   ..+.     +...+ .|..+.+..+++   ..  ++|+
T Consensus        30 ~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~---~~~~-----Ga~~v-i~~~~~~~~~~i~~~t~~~g~d~  100 (174)
T d1yb5a2          30 ESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKI---VLQN-----GAHEV-FNHREVNYIDKIKKYVGEKGIDI  100 (174)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH---HHHT-----TCSEE-EETTSTTHHHHHHHHHCTTCEEE
T ss_pred             CEEEEEeccccccccccccccccCccccccccccccccc---cccc-----Ccccc-cccccccHHHHhhhhhccCCceE
Confidence            479999999999999999998999999999987643322   1111     22222 255554433333   22  5899


Q ss_pred             EEEeccc
Q 039049           77 VFHTASP   83 (305)
Q Consensus        77 Vi~~a~~   83 (305)
                      ||++.+.
T Consensus       101 v~d~~g~  107 (174)
T d1yb5a2         101 IIEMLAN  107 (174)
T ss_dssp             EEESCHH
T ss_pred             EeecccH
Confidence            9998764

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=97.58  E-value=0.00013  Score=52.59  Aligned_cols=65  Identities=15%  Similarity=0.133  Sum_probs=45.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      |||.|+| .|-+|+.+++.|++.|++|++..|++.........        ++..       .+...++.+++|+||-+.
T Consensus         1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~--------~~~~-------~~~~~e~~~~~diIi~~v   64 (152)
T d1i36a2           1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERAR--------TVGV-------TETSEEDVYSCPVVISAV   64 (152)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHH--------HHTC-------EECCHHHHHTSSEEEECS
T ss_pred             CEEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhh--------cccc-------cccHHHHHhhcCeEEEEe
Confidence            5799998 59999999999999999999888776533221111        1111       122456778899999775


Q ss_pred             c
Q 039049           82 S   82 (305)
Q Consensus        82 ~   82 (305)
                      .
T Consensus        65 ~   65 (152)
T d1i36a2          65 T   65 (152)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.56  E-value=5.8e-05  Score=56.32  Aligned_cols=76  Identities=12%  Similarity=0.054  Sum_probs=49.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi~   79 (305)
                      .+|||+||+|-+|...++.....|.+|+++++++++.+...   ..   .....+..-|-...+.+.+...  ++|+||+
T Consensus        31 ~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~---~~---Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v~D  104 (182)
T d1v3va2          31 ETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK---QI---GFDAAFNYKTVNSLEEALKKASPDGYDCYFD  104 (182)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH---HT---TCSEEEETTSCSCHHHHHHHHCTTCEEEEEE
T ss_pred             CEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHH---hh---hhhhhcccccccHHHHHHHHhhcCCCceeEE
Confidence            57999999999999999999999999999998865432221   11   1111122222222233333333  6999999


Q ss_pred             eccc
Q 039049           80 TASP   83 (305)
Q Consensus        80 ~a~~   83 (305)
                      +.|.
T Consensus       105 ~vG~  108 (182)
T d1v3va2         105 NVGG  108 (182)
T ss_dssp             SSCH
T ss_pred             ecCc
Confidence            9874

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.47  E-value=0.00013  Score=53.52  Aligned_cols=75  Identities=13%  Similarity=-0.032  Sum_probs=51.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      .+|+|+|+ |.+|...++.+...|.+|+++++++++.+....+        +...+.....+.+..++..+++|+|+.+.
T Consensus        29 ~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~l--------Ga~~~i~~~~~~~~~~~~~~~~d~vi~~~   99 (168)
T d1piwa2          29 KKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKM--------GADHYIATLEEGDWGEKYFDTFDLIVVCA   99 (168)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH--------TCSEEEEGGGTSCHHHHSCSCEEEEEECC
T ss_pred             CEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhcc--------CCcEEeeccchHHHHHhhhcccceEEEEe
Confidence            57999996 9999999998888899999999988765543332        22222211123344445556889999997


Q ss_pred             cccc
Q 039049           82 SPVL   85 (305)
Q Consensus        82 ~~~~   85 (305)
                      +...
T Consensus       100 ~~~~  103 (168)
T d1piwa2         100 SSLT  103 (168)
T ss_dssp             SCST
T ss_pred             cCCc
Confidence            7644

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.47  E-value=6.5e-05  Score=55.83  Aligned_cols=73  Identities=10%  Similarity=0.008  Sum_probs=51.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHH---hc--CCCE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEA---IQ--GVDG   76 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~---~~--~~d~   76 (305)
                      .+|+|+||+|.+|..+++.+...|.+|+++++++++.+....+        +...+ .|..+.+..+++   -.  ++|+
T Consensus        30 ~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~l--------Ga~~v-i~~~~~d~~~~v~~~t~g~g~d~  100 (179)
T d1qora2          30 EQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKA--------GAWQV-INYREEDLVERLKEITGGKKVRV  100 (179)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH--------TCSEE-EETTTSCHHHHHHHHTTTCCEEE
T ss_pred             CEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhc--------CCeEE-EECCCCCHHHHHHHHhCCCCeEE
Confidence            4799999999999999999999999999999987654332222        22222 255554433333   22  5799


Q ss_pred             EEEeccc
Q 039049           77 VFHTASP   83 (305)
Q Consensus        77 Vi~~a~~   83 (305)
                      |+++.+.
T Consensus       101 v~d~~g~  107 (179)
T d1qora2         101 VYDSVGR  107 (179)
T ss_dssp             EEECSCG
T ss_pred             EEeCccH
Confidence            9999865

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.47  E-value=6.6e-05  Score=47.01  Aligned_cols=37  Identities=24%  Similarity=0.214  Sum_probs=33.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcc
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDL   38 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~   38 (305)
                      ++|+|+||+|-+|...++.+...|.+|+++++++++.
T Consensus        33 ~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~   69 (77)
T d1o8ca2          33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTH   69 (77)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGH
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHH
Confidence            4699999999999999998888999999999987644

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.45  E-value=0.00043  Score=48.00  Aligned_cols=30  Identities=23%  Similarity=0.423  Sum_probs=26.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTT   31 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~   31 (305)
                      |||.|.|++|-+|+.+.+.+.++|+++.+.
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~   30 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLK   30 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEE
Confidence            579999999999999999999999887655

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=97.42  E-value=7.5e-05  Score=55.03  Aligned_cols=36  Identities=25%  Similarity=0.455  Sum_probs=30.7

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCC--eEEEEEeCCCc
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGH--MVRTTVRDPED   37 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~~~   37 (305)
                      ||+|+|+| .|.+|..+++.|.+.|+  +|++.+|+++.
T Consensus         1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~   38 (171)
T d2g5ca2           1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPES   38 (171)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHH
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHH
Confidence            89999998 59999999999999996  67777776543

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.38  E-value=6.2e-05  Score=55.22  Aligned_cols=39  Identities=26%  Similarity=0.256  Sum_probs=34.7

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccch
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKV   41 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~   41 (305)
                      +|||+||+|-+|...++.....|.+|+++++++++....
T Consensus        26 ~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~   64 (167)
T d1tt7a2          26 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL   64 (167)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             EEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHH
Confidence            699999999999999998888999999999998765443

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.36  E-value=0.00031  Score=53.90  Aligned_cols=74  Identities=15%  Similarity=0.090  Sum_probs=51.7

Q ss_pred             CcEEEeCC----------------cchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccC-CC-
Q 039049            2 PEYCVTGG----------------TGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADL-LM-   63 (305)
Q Consensus         2 ~~ilItG~----------------~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~d-   63 (305)
                      ++||||+|                ||..|.+|++++..+|++|+++.-......           ...+..+...- .+ 
T Consensus         7 ~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~-----------p~~~~~~~~~t~~~m   75 (223)
T d1u7za_           7 LNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPT-----------PPFVKRVDVMTALEM   75 (223)
T ss_dssp             CEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCC-----------CTTEEEEECCSHHHH
T ss_pred             CEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccCc-----------ccccccceehhhHHH
Confidence            68889876                599999999999999999999976543111           11445554321 11 


Q ss_pred             cchHHHHhcCCCEEEEecccccc
Q 039049           64 EGSFDEAIQGVDGVFHTASPVLV   86 (305)
Q Consensus        64 ~~~~~~~~~~~d~Vi~~a~~~~~   86 (305)
                      .+.+.+.+.+.|++|++|+....
T Consensus        76 ~~~~~~~~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          76 EAAVNASVQQQNIFIGCAAVADY   98 (223)
T ss_dssp             HHHHHHHGGGCSEEEECCBCCSE
T ss_pred             HHHHHhhhccceeEeeeechhhh
Confidence            12344455689999999998765

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.32  E-value=6.2e-05  Score=54.97  Aligned_cols=65  Identities=17%  Similarity=0.221  Sum_probs=47.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      |||.|+| .|.+|+.+++.|++.|++|++.+|++++.......        ....       .+...++.+++|+||-|.
T Consensus         1 MkIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~--------~~~~-------~~~~~e~~~~~d~ii~~v   64 (161)
T d1vpda2           1 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAA--------GAET-------ASTAKAIAEQCDVIITML   64 (161)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT--------TCEE-------CSSHHHHHHHCSEEEECC
T ss_pred             CEEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHh--------hhhh-------cccHHHHHhCCCeEEEEc
Confidence            5799998 59999999999999999999999987643332211        1111       123566677889999775


Q ss_pred             c
Q 039049           82 S   82 (305)
Q Consensus        82 ~   82 (305)
                      .
T Consensus        65 ~   65 (161)
T d1vpda2          65 P   65 (161)
T ss_dssp             S
T ss_pred             C
Confidence            3

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=97.30  E-value=0.00061  Score=47.40  Aligned_cols=68  Identities=16%  Similarity=0.188  Sum_probs=51.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHH-hcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEA-IQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~Vi~~   80 (305)
                      |.|+|+|. |-+|+.+++.|  +|++|.++..++.......        ..++.++.+|.++++.+.++ +++++.+|-+
T Consensus         1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~--------~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~   69 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKVL--------RSGANFVHGDPTRVSDLEKANVRGARAVIVN   69 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHHH--------HTTCEEEESCTTSHHHHHHTTCTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHHH--------hcCccccccccCCHHHHHHhhhhcCcEEEEe
Confidence            56899985 88999999999  4678888877766433221        22688999999999888876 4688888854

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.30  E-value=0.0006  Score=44.43  Aligned_cols=70  Identities=17%  Similarity=0.125  Sum_probs=47.5

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      .|+|+|+|. |-.|..+++.|.+.|++|++.+.+...... ..+      .....+..+...     ...+.++|.||-.
T Consensus         5 ~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~-~~~------~~~~~~~~~~~~-----~~~~~~~d~vi~S   71 (93)
T d2jfga1           5 GKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGL-DKL------PEAVERHTGSLN-----DEWLMAADLIVAS   71 (93)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTG-GGS------CTTSCEEESBCC-----HHHHHHCSEEEEC
T ss_pred             CCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhH-HHH------hhccceeecccc-----hhhhccCCEEEEC
Confidence            378999997 999999999999999999999876542211 111      113344444321     2345678999976


Q ss_pred             ccc
Q 039049           81 ASP   83 (305)
Q Consensus        81 a~~   83 (305)
                      -|.
T Consensus        72 PGi   74 (93)
T d2jfga1          72 PGI   74 (93)
T ss_dssp             TTS
T ss_pred             CCC
Confidence            665

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.24  E-value=0.0029  Score=42.62  Aligned_cols=92  Identities=11%  Similarity=0.059  Sum_probs=60.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      ++|+|+|| |-+|..-++.|++.|.+|++++.......  ..+.    ...+++++.....+.     .+.+++.|+.+.
T Consensus        13 k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~--~~~~----~~~~i~~~~~~~~~~-----dl~~~~lv~~at   80 (113)
T d1pjqa1          13 RDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQF--TVWA----NEGMLTLVEGPFDET-----LLDSCWLAIAAT   80 (113)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHH--HHHH----TTTSCEEEESSCCGG-----GGTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHH--HHHH----hcCCceeeccCCCHH-----HhCCCcEEeecC
Confidence            78999997 99999999999999999999976554221  1111    123677777665542     256778888553


Q ss_pred             cccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEecc
Q 039049           82 SPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSS  125 (305)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS  125 (305)
                      +.        ...         ...+.+.|++. +  .+|++..
T Consensus        81 ~d--------~~~---------n~~i~~~a~~~-~--ilVNv~D  104 (113)
T d1pjqa1          81 DD--------DTV---------NQRVSDAAESR-R--IFCNVVD  104 (113)
T ss_dssp             SC--------HHH---------HHHHHHHHHHT-T--CEEEETT
T ss_pred             CC--------HHH---------HHHHHHHHHHc-C--CEEEeCC
Confidence            22        111         34667778777 4  4666543

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=97.23  E-value=0.00021  Score=51.54  Aligned_cols=24  Identities=29%  Similarity=0.462  Sum_probs=21.7

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCC
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGH   26 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~   26 (305)
                      ||.|+|||||+|..|++.|.+..+
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCCS
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCC
Confidence            799999999999999999987754

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.23  E-value=0.00033  Score=51.39  Aligned_cols=74  Identities=14%  Similarity=0.087  Sum_probs=49.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      |+|+|+|+ |..+++++..|.+.|.+|+++.|+.++.......   ......++.+.  +.+.     ...++|+|||+.
T Consensus        19 k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~---~~~~~~~~~~~--~~~~-----~~~~~dliIN~T   87 (170)
T d1nyta1          19 LRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKL---FAHTGSIQALS--MDEL-----EGHEFDLIINAT   87 (170)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH---TGGGSSEEECC--SGGG-----TTCCCSEEEECC
T ss_pred             CEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHH---Hhhcccccccc--cccc-----cccccceeeccc
Confidence            68999996 9999999999999999999999987654433221   11111233322  2211     124689999997


Q ss_pred             ccccc
Q 039049           82 SPVLV   86 (305)
Q Consensus        82 ~~~~~   86 (305)
                      .....
T Consensus        88 p~G~~   92 (170)
T d1nyta1          88 SSGIS   92 (170)
T ss_dssp             SCGGG
T ss_pred             ccCcc
Confidence            76553

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.20  E-value=0.00036  Score=51.20  Aligned_cols=73  Identities=15%  Similarity=0.144  Sum_probs=49.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      ++|+|+|+ |..|++++..|.+.+-+|++++|+.++........   ....++..+..|-..       +.++|+|||+.
T Consensus        19 k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~---~~~~~~~~~~~~~~~-------~~~~diiIN~t   87 (171)
T d1p77a1          19 QHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERF---QPYGNIQAVSMDSIP-------LQTYDLVINAT   87 (171)
T ss_dssp             CEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHH---GGGSCEEEEEGGGCC-------CSCCSEEEECC
T ss_pred             CEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHH---hhccccchhhhcccc-------ccccceeeecc
Confidence            68999996 88899999999988889999999976544332221   112244555544222       45789999998


Q ss_pred             cccc
Q 039049           82 SPVL   85 (305)
Q Consensus        82 ~~~~   85 (305)
                      ....
T Consensus        88 p~g~   91 (171)
T d1p77a1          88 SAGL   91 (171)
T ss_dssp             CC--
T ss_pred             cccc
Confidence            7654

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.17  E-value=0.0015  Score=47.57  Aligned_cols=74  Identities=23%  Similarity=0.152  Sum_probs=48.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccC--CCcchHHHHh-----cCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADL--LMEGSFDEAI-----QGV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~--~d~~~~~~~~-----~~~   74 (305)
                      .+|+|+| +|-+|...++.+...|.+|+++.+++.+.+....+      .....+ ..|-  .+...+.+.+     .++
T Consensus        28 ~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~------ga~~~~-~~~~~~~~~~~~~~~~~~~~g~g~   99 (170)
T d1e3ja2          28 TTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNC------GADVTL-VVDPAKEEESSIIERIRSAIGDLP   99 (170)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT------TCSEEE-ECCTTTSCHHHHHHHHHHHSSSCC
T ss_pred             CEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHHc------CCcEEE-eccccccccchhhhhhhcccccCC
Confidence            4799997 69999999999989999999999887654332222      112222 2222  2223333333     268


Q ss_pred             CEEEEeccc
Q 039049           75 DGVFHTASP   83 (305)
Q Consensus        75 d~Vi~~a~~   83 (305)
                      |+||.+++.
T Consensus       100 D~vid~~g~  108 (170)
T d1e3ja2         100 NVTIDCSGN  108 (170)
T ss_dssp             SEEEECSCC
T ss_pred             ceeeecCCC
Confidence            999999876

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=97.13  E-value=0.00022  Score=51.33  Aligned_cols=65  Identities=20%  Similarity=0.171  Sum_probs=46.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      |||.|+| +|-+|+++++.|++.|++|++..|+.++......   ..    ++.       -..+..++++++|+||-+.
T Consensus         1 MkIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~---~~----g~~-------~~~~~~~~~~~~dvIilav   65 (152)
T d2ahra2           1 MKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAE---QL----ALP-------YAMSHQDLIDQVDLVILGI   65 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHH---HH----TCC-------BCSSHHHHHHTCSEEEECS
T ss_pred             CEEEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcc---cc----cee-------eechhhhhhhccceeeeec
Confidence            6799998 5999999999999999999999888654333211   11    111       1124667778899999765

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.13  E-value=0.00017  Score=53.32  Aligned_cols=38  Identities=24%  Similarity=0.206  Sum_probs=34.3

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccc
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSK   40 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~   40 (305)
                      +|||+||+|-+|...++.....|.+|++++|++++...
T Consensus        34 ~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~   71 (177)
T d1o89a2          34 EIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEY   71 (177)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHH
T ss_pred             cEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHH
Confidence            79999999999999999999999999999998876543

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=97.11  E-value=0.00046  Score=51.24  Aligned_cols=32  Identities=19%  Similarity=0.397  Sum_probs=26.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC-CeEEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG-HMVRTTVR   33 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~r   33 (305)
                      .||.|+||||++|+.|++.|.+.. .++..+..
T Consensus         6 ikVaIlGATGyvG~elirLL~~HP~~ei~~l~S   38 (183)
T d2cvoa1           6 VRIAVLGASGYTGAEIVRLLANHPQFRIKVMTA   38 (183)
T ss_dssp             EEEEEESCSSHHHHHHHHHHTTCSSEEEEEEEC
T ss_pred             cEEEEECcccHHHHHHHHHHHhCCCceEEEEec
Confidence            479999999999999999998765 36666643

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=97.08  E-value=0.0018  Score=43.87  Aligned_cols=82  Identities=21%  Similarity=0.270  Sum_probs=54.1

Q ss_pred             CcEEEeCCc---chHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            2 PEYCVTGGT---GFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~---G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      |+|.|+|++   +..|..+.+.|++.||+|+.+..+..   +.                 ..+.-..++.++-+.+|+++
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~---~i-----------------~G~~~y~sl~~lp~~~D~vv   61 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYD---EI-----------------EGLKCYRSVRELPKDVDVIV   61 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCS---EE-----------------TTEECBSSGGGSCTTCCEEE
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccc---cc-----------------cCccccccchhccccceEEE
Confidence            689999988   78999999999999999988843322   10                 01111223444445779888


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEE
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVL  122 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~  122 (305)
                      -+.....                  +..+++.|.+. |++.+++
T Consensus        62 i~vp~~~------------------~~~~l~~~~~~-g~k~v~~   86 (116)
T d1y81a1          62 FVVPPKV------------------GLQVAKEAVEA-GFKKLWF   86 (116)
T ss_dssp             ECSCHHH------------------HHHHHHHHHHT-TCCEEEE
T ss_pred             EEeCHHH------------------HHHHHHHHHhc-CCceEEe
Confidence            6643311                  45667778787 8886654

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=97.04  E-value=0.00043  Score=47.60  Aligned_cols=34  Identities=24%  Similarity=0.379  Sum_probs=31.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPE   36 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~   36 (305)
                      ++++|+|| |++|.+++..|.+.|.+|+++.+++.
T Consensus        31 ~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          31 SRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            57999997 99999999999999999999998865

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.98  E-value=0.00052  Score=46.86  Aligned_cols=34  Identities=29%  Similarity=0.367  Sum_probs=31.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPE   36 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~   36 (305)
                      ++++|+|| |++|..++..|.+.|.+|+++.|.+.
T Consensus        23 ~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          23 KSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            57999997 99999999999999999999988765

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.96  E-value=0.00067  Score=49.56  Aligned_cols=73  Identities=12%  Similarity=0.053  Sum_probs=50.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      .+|+|.|+ |-+|...++.+...|.+++++++++++.+....+        +...+ .|..+.+......+++|++|.+.
T Consensus        32 ~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~l--------Gad~~-i~~~~~~~~~~~~~~~D~vid~~  101 (168)
T d1uufa2          32 KKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKAL--------GADEV-VNSRNADEMAAHLKSFDFILNTV  101 (168)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH--------TCSEE-EETTCHHHHHTTTTCEEEEEECC
T ss_pred             CEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHhcc--------CCcEE-EECchhhHHHHhcCCCceeeeee
Confidence            57999986 8899999999988999999988877643322222        22221 34455554555556899999998


Q ss_pred             ccc
Q 039049           82 SPV   84 (305)
Q Consensus        82 ~~~   84 (305)
                      +..
T Consensus       102 g~~  104 (168)
T d1uufa2         102 AAP  104 (168)
T ss_dssp             SSC
T ss_pred             ecc
Confidence            763

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.94  E-value=0.0013  Score=48.58  Aligned_cols=61  Identities=23%  Similarity=0.257  Sum_probs=47.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      ++|.|+| .|-||+.+++.|..-|.+|++.+|++...                     +..-.+++++++..+|+|+.+.
T Consensus        43 k~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~~~~---------------------~~~~~~~l~ell~~sDiv~~~~  100 (181)
T d1qp8a1          43 EKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTPKEG---------------------PWRFTNSLEEALREARAAVCAL  100 (181)
T ss_dssp             CEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSCCCS---------------------SSCCBSCSHHHHTTCSEEEECC
T ss_pred             ceEEEec-cccccccceeeeecccccccccccccccc---------------------ceeeeechhhhhhccchhhccc
Confidence            6899999 59999999999999999999998875421                     1111235788999999999877


Q ss_pred             ccc
Q 039049           82 SPV   84 (305)
Q Consensus        82 ~~~   84 (305)
                      ...
T Consensus       101 pl~  103 (181)
T d1qp8a1         101 PLN  103 (181)
T ss_dssp             CCS
T ss_pred             ccc
Confidence            654

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.94  E-value=0.00088  Score=49.25  Aligned_cols=84  Identities=14%  Similarity=0.185  Sum_probs=48.2

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcC-CeEEEEEeCCCcccchhhhhhcc---CccCceEEE-EccCCCcchHHHHhcCCC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKG-HMVRTTVRDPEDLSKVGFLWELN---GAEERLKIM-KADLLMEGSFDEAIQGVD   75 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~-~~D~~d~~~~~~~~~~~d   75 (305)
                      |-||.|-| .|.||+.+++.|.+++ .+|+++............+..-.   ...+....+ ...+.-...+..++.++|
T Consensus         1 MIKVaING-fGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vD   79 (178)
T d1b7go1           1 MVNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSD   79 (178)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCS
T ss_pred             CeEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhhcCC
Confidence            78999999 7999999999999865 68888865433222111111000   000000000 011112234556666899


Q ss_pred             EEEEeccccc
Q 039049           76 GVFHTASPVL   85 (305)
Q Consensus        76 ~Vi~~a~~~~   85 (305)
                      +||-|.+...
T Consensus        80 iViecTG~f~   89 (178)
T d1b7go1          80 IVVDTTPNGV   89 (178)
T ss_dssp             EEEECCSTTH
T ss_pred             EEEECCCCcC
Confidence            9999988743

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.92  E-value=0.00089  Score=41.63  Aligned_cols=35  Identities=31%  Similarity=0.334  Sum_probs=31.8

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPE   36 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~   36 (305)
                      ||+|.|+|| |.+|+-++..-...|++|.+++-++.
T Consensus         1 ~k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~   35 (78)
T d3etja2           1 MKQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAE   35 (78)
T ss_dssp             CEEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSC
T ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCC
Confidence            899999996 99999999999999999999976654

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.90  E-value=0.00038  Score=50.06  Aligned_cols=37  Identities=24%  Similarity=0.335  Sum_probs=32.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC-CeEEEEEeCCCccc
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG-HMVRTTVRDPEDLS   39 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~   39 (305)
                      |||.++|+ |-+|+++++.|++.| ++|++.+|++++..
T Consensus         1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~   38 (152)
T d1yqga2           1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRE   38 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHH
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHH
Confidence            67999996 999999999999887 89999999876443

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.90  E-value=0.00071  Score=46.61  Aligned_cols=34  Identities=21%  Similarity=0.263  Sum_probs=31.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPE   36 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~   36 (305)
                      ++|+|+|| |++|..++..|.+.|.+|+++.|.+.
T Consensus        31 k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~~   64 (123)
T d1nhpa2          31 NNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILDR   64 (123)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CEEEEECC-hHHHHHHHHHhhccceEEEEEEecCc
Confidence            58999997 99999999999999999999988754

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=96.90  E-value=0.00052  Score=46.86  Aligned_cols=34  Identities=21%  Similarity=0.326  Sum_probs=31.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPE   36 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~   36 (305)
                      ++|+|+|| |++|.+++..|+..|.+|+++.|.+.
T Consensus        23 ~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   56 (117)
T d1onfa2          23 KKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNR   56 (117)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred             CEEEEECC-chHHHHHHHHHHhccccceeeehhcc
Confidence            58999997 99999999999999999999998754

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.90  E-value=0.00057  Score=47.07  Aligned_cols=34  Identities=21%  Similarity=0.343  Sum_probs=31.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPE   36 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~   36 (305)
                      ++++|+|| |+||..++..|.+.|.+|+++.|++.
T Consensus        24 ~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          24 KRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CeEEEECC-CchHHHHHHHHHhhCcceeEEEeccc
Confidence            57999997 99999999999999999999988764

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=96.88  E-value=0.00072  Score=46.28  Aligned_cols=34  Identities=21%  Similarity=0.151  Sum_probs=31.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPE   36 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~   36 (305)
                      ++++|+|| |+||..++..|++.|.+|+++.|+..
T Consensus        23 ~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          23 GKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence            57999997 99999999999999999999998765

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.85  E-value=0.0045  Score=45.05  Aligned_cols=73  Identities=14%  Similarity=0.089  Sum_probs=48.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhhhhhccCccCceE-EEEccCCCcchHHHHhc-----CC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGFLWELNGAEERLK-IMKADLLMEGSFDEAIQ-----GV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~d~~~~~~~~~-----~~   74 (305)
                      .+|+|+|+ |.+|...++.+...|. +|+++++++.+......+        +.. ++..+-.+.....+.++     ++
T Consensus        28 d~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~--------Ga~~~~~~~~~~~~~~~~~~~~~~g~g~   98 (171)
T d1pl8a2          28 HKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEI--------GADLVLQISKESPQEIARKVEGQLGCKP   98 (171)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT--------TCSEEEECSSCCHHHHHHHHHHHHTSCC
T ss_pred             CEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHh--------CCcccccccccccccccccccccCCCCc
Confidence            47999986 9999999999999997 799998876644322221        222 22233334433444332     68


Q ss_pred             CEEEEeccc
Q 039049           75 DGVFHTASP   83 (305)
Q Consensus        75 d~Vi~~a~~   83 (305)
                      |+||.+.|.
T Consensus        99 Dvvid~~G~  107 (171)
T d1pl8a2          99 EVTIECTGA  107 (171)
T ss_dssp             SEEEECSCC
T ss_pred             eEEEeccCC
Confidence            999999876

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=96.84  E-value=0.0013  Score=47.45  Aligned_cols=98  Identities=21%  Similarity=0.276  Sum_probs=54.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHc-CCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDK-GHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      +||+|.|++|-+|+.+++.+.+. +.++.+..-++..................-..+.      .++..+++.+|+||.+
T Consensus         5 ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~------~~~~~~~~~~DViIDF   78 (162)
T d1diha1           5 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQ------SSLDAVKDDFDVFIDF   78 (162)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEE------SCSTTTTTSCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceee------ccHHHHhcccceEEEe
Confidence            58999999999999999999876 5676555432221111000111111000001112      2234456789999977


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEecc
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSS  125 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS  125 (305)
                      .-+-                  ++..+++.|.+. ++ .+|.=+|
T Consensus        79 s~p~------------------~~~~~~~~a~~~-~~-~~ViGTT  103 (162)
T d1diha1          79 TRPE------------------GTLNHLAFCRQH-GK-GMVIGTT  103 (162)
T ss_dssp             SCHH------------------HHHHHHHHHHHT-TC-EEEECCC
T ss_pred             ccHH------------------HHHHHHHHHHhc-cc-eeEEecC
Confidence            4331                  155677788887 64 4555444

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=96.83  E-value=0.00071  Score=46.09  Aligned_cols=34  Identities=18%  Similarity=0.166  Sum_probs=31.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPE   36 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~   36 (305)
                      ++|+|+|| |++|..++..|.+.|.+|+++.|.+.
T Consensus        22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CEEEEECC-ChhhHHHHHHhhccccEEEEEeecch
Confidence            57999997 99999999999999999999988764

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.81  E-value=0.00041  Score=50.06  Aligned_cols=74  Identities=18%  Similarity=0.197  Sum_probs=56.3

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEecc
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTAS   82 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a~   82 (305)
                      +|+|+|+ |-.|..-++.....|.+|++++++.+........   .  ..+++...   .+.+.+.+.+.++|+||.++-
T Consensus        34 ~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~---~--~~~~~~~~---~~~~~l~~~~~~aDivI~aal  104 (168)
T d1pjca1          34 KVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETL---F--GSRVELLY---SNSAEIETAVAEADLLIGAVL  104 (168)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---H--GGGSEEEE---CCHHHHHHHHHTCSEEEECCC
T ss_pred             EEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHh---h--cccceeeh---hhhhhHHHhhccCcEEEEeee
Confidence            7999997 9999999999999999999999987644332221   1  11334433   456778899999999999988


Q ss_pred             ccc
Q 039049           83 PVL   85 (305)
Q Consensus        83 ~~~   85 (305)
                      ...
T Consensus       105 ipG  107 (168)
T d1pjca1         105 VPG  107 (168)
T ss_dssp             CTT
T ss_pred             cCC
Confidence            755

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.78  E-value=0.00087  Score=46.08  Aligned_cols=33  Identities=24%  Similarity=0.236  Sum_probs=30.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDP   35 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~   35 (305)
                      ++++|+|| |+||..++..|.+.|.+|+++.|++
T Consensus        21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~~   53 (122)
T d1h6va2          21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRSI   53 (122)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             CeEEEECC-CccHHHHHHHHhhcCCeEEEEEech
Confidence            47999997 9999999999999999999998763

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=96.76  E-value=0.00073  Score=46.49  Aligned_cols=34  Identities=32%  Similarity=0.471  Sum_probs=30.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPE   36 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~   36 (305)
                      ++++|+|| |++|..++..|.+.|.+|+++.|++.
T Consensus        33 ~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          33 GEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             SEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CcEEEECC-cHHHHHHHHHhhcccceEEEEecccc
Confidence            57899997 99999999999999999999988754

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.75  E-value=0.0013  Score=48.46  Aligned_cols=74  Identities=9%  Similarity=0.097  Sum_probs=50.4

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      +.+|.|+| .|.+|..+++.|++.||+|++.+|++++.......   .... . .. . -....+.+......+|.+|-+
T Consensus         2 ~~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~---~~~~-~-~~-~-~a~~~~~~~~~~~~~~~ii~~   73 (176)
T d2pgda2           2 QADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLAN---EAKG-T-KV-L-GAHSLEEMVSKLKKPRRIILL   73 (176)
T ss_dssp             CBSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHT---TTTT-S-SC-E-ECSSHHHHHHHBCSSCEEEEC
T ss_pred             CCcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHh---cccc-c-cc-c-chhhhhhhhhhhcccceEEEe
Confidence            46899999 59999999999999999999999988754432211   0000 0 00 0 123455667777788888876


Q ss_pred             cc
Q 039049           81 AS   82 (305)
Q Consensus        81 a~   82 (305)
                      ..
T Consensus        74 ~~   75 (176)
T d2pgda2          74 VK   75 (176)
T ss_dssp             SC
T ss_pred             cC
Confidence            53

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.75  E-value=0.00082  Score=49.02  Aligned_cols=67  Identities=19%  Similarity=0.192  Sum_probs=45.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ++|+|+|+ |..|++++..|.+.|. +|++++|+.++......   ..    +...+  +...       ..++|+|||+
T Consensus        18 ~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~---~~----~~~~~--~~~~-------~~~~DliINa   80 (167)
T d1npya1          18 AKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAA---LY----GYAYI--NSLE-------NQQADILVNV   80 (167)
T ss_dssp             SCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHH---HH----TCEEE--SCCT-------TCCCSEEEEC
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHH---hh----hhhhh--hccc-------ccchhhheec
Confidence            68999996 9999999999999995 89999998765433221   11    11221  1111       1367999998


Q ss_pred             ccccc
Q 039049           81 ASPVL   85 (305)
Q Consensus        81 a~~~~   85 (305)
                      -....
T Consensus        81 TpiGm   85 (167)
T d1npya1          81 TSIGM   85 (167)
T ss_dssp             SSTTC
T ss_pred             cccCC
Confidence            76554

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=96.72  E-value=0.0012  Score=48.70  Aligned_cols=37  Identities=24%  Similarity=0.292  Sum_probs=33.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCccc
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLS   39 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~   39 (305)
                      |||-|+| .|.+|.++++.|++.||+|++.+|++++..
T Consensus         2 MkIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~~   38 (178)
T d1pgja2           2 MDVGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKSE   38 (178)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHH
T ss_pred             CEEEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHHH
Confidence            6899999 699999999999999999999999876443

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=96.71  E-value=0.00095  Score=49.40  Aligned_cols=37  Identities=19%  Similarity=0.188  Sum_probs=31.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCccc
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLS   39 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~   39 (305)
                      .+|+|+|+ |-+|...++.+...|. +|+++++++++.+
T Consensus        30 ~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~   67 (182)
T d1vj0a2          30 KTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLK   67 (182)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHH
T ss_pred             CEEEEECC-Cccchhheeccccccccccccccccccccc
Confidence            47999996 9999999999999996 7999998876443

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.70  E-value=0.00097  Score=46.04  Aligned_cols=34  Identities=21%  Similarity=0.372  Sum_probs=31.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPE   36 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~   36 (305)
                      ++++|+|| |++|..++..|...|.+|+++.|++.
T Consensus        23 k~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~   56 (125)
T d3grsa2          23 GRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDK   56 (125)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CEEEEEcC-CccHHHHHHHHhcCCcEEEEEeeccc
Confidence            57999997 99999999999999999999999764

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.66  E-value=0.0011  Score=48.39  Aligned_cols=72  Identities=15%  Similarity=0.144  Sum_probs=47.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhhhhhccCccCce-EEEEccCCCcchHHHHh-----cCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGFLWELNGAEERL-KIMKADLLMEGSFDEAI-----QGV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~d~~~~~~~~-----~~~   74 (305)
                      .+|+|+|++|-+|...++.+...|. +|++..+++.+......+        +. ..+  |..+.+..++..     .++
T Consensus        29 ~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~--------Ga~~~i--~~~~~~~~~~~~~~~~~~~~   98 (170)
T d1jvba2          29 KTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA--------GADYVI--NASMQDPLAEIRRITESKGV   98 (170)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH--------TCSEEE--ETTTSCHHHHHHHHTTTSCE
T ss_pred             CEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHc--------CCceee--ccCCcCHHHHHHHHhhcccc
Confidence            4799999999999999999988884 888888776543322221        22 222  233333333333     258


Q ss_pred             CEEEEeccc
Q 039049           75 DGVFHTASP   83 (305)
Q Consensus        75 d~Vi~~a~~   83 (305)
                      |+||.+++.
T Consensus        99 d~vid~~g~  107 (170)
T d1jvba2          99 DAVIDLNNS  107 (170)
T ss_dssp             EEEEESCCC
T ss_pred             hhhhccccc
Confidence            999999875

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.65  E-value=0.00098  Score=45.26  Aligned_cols=34  Identities=26%  Similarity=0.340  Sum_probs=30.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPE   36 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~   36 (305)
                      ++++|+|| |++|..++..|.+.|.+|+++.|.+.
T Consensus        22 ~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          22 QHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHhhcccceEEEeeecc
Confidence            57999997 99999999999999999999988754

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=96.57  E-value=0.0011  Score=49.40  Aligned_cols=38  Identities=16%  Similarity=0.210  Sum_probs=31.9

Q ss_pred             CcEEE-eCCcchHHHHHHHHHHHcCCeEEEEEeCCCccc
Q 039049            2 PEYCV-TGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLS   39 (305)
Q Consensus         2 ~~ilI-tG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~   39 (305)
                      .+++| .||+|-+|...++.....|.+|++++|+.++.+
T Consensus        30 ~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~   68 (189)
T d1gu7a2          30 KDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLD   68 (189)
T ss_dssp             TCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHH
T ss_pred             CEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccc
Confidence            35777 589999999999998889999999998876543

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=96.55  E-value=0.001  Score=45.79  Aligned_cols=34  Identities=21%  Similarity=0.240  Sum_probs=31.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPE   36 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~   36 (305)
                      ++++|+|| |+||..++..|.+.|.+|+++.|++.
T Consensus        26 ~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          26 KKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             SEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccc
Confidence            57999997 99999999999999999999998775

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=96.54  E-value=0.0058  Score=45.55  Aligned_cols=65  Identities=18%  Similarity=0.064  Sum_probs=47.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      ++|.|+| .|-||+.+++.|..-|.+|++.++........                  +....+.+.+++.++|+|+.+.
T Consensus        44 k~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~------------------~~~~~~~l~~~l~~sDii~~~~  104 (197)
T d1j4aa1          44 QVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPELEK------------------KGYYVDSLDDLYKQADVISLHV  104 (197)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHH------------------TTCBCSCHHHHHHHCSEEEECS
T ss_pred             CeEEEec-ccccchhHHHhHhhhcccccccCccccccccc------------------ceeeeccccccccccccccccC
Confidence            6899999 69999999999999999999987654321110                  1112345778888889888776


Q ss_pred             cccc
Q 039049           82 SPVL   85 (305)
Q Consensus        82 ~~~~   85 (305)
                      ....
T Consensus       105 plt~  108 (197)
T d1j4aa1         105 PDVP  108 (197)
T ss_dssp             CCCG
T ss_pred             Cccc
Confidence            6543

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=96.54  E-value=0.0014  Score=45.73  Aligned_cols=34  Identities=18%  Similarity=0.300  Sum_probs=31.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPE   36 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~   36 (305)
                      ++|+|+|| |++|..++..|.+.|.+|+++.+.+.
T Consensus        36 k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          36 NRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CEEEEECC-chHHHHHHHHHHhhCcceeeeeeccc
Confidence            57999997 99999999999999999999988764

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=96.53  E-value=0.0039  Score=43.63  Aligned_cols=84  Identities=20%  Similarity=0.089  Sum_probs=55.4

Q ss_pred             CcEEEeCCc---chHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            2 PEYCVTGGT---GFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~---G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      ++|+|+|++   +-.|..+++.|.+.||+|+.+.-+..   +..          +...       ...+.++-..+|.|+
T Consensus        20 ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~---~i~----------G~~~-------~~sl~dlp~~iD~v~   79 (139)
T d2d59a1          20 KKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYE---EVL----------GRKC-------YPSVLDIPDKIEVVD   79 (139)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCS---EET----------TEEC-------BSSGGGCSSCCSEEE
T ss_pred             CeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCccc---ccC----------CCcc-------cccccccCccceEEE
Confidence            579999998   78999999999999999988843322   100          1111       222334444678887


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEec
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTS  124 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  124 (305)
                      -+....                  ....+++.|.+. +++.+++.+
T Consensus        80 i~vp~~------------------~~~~~~~e~~~~-g~k~v~~~~  106 (139)
T d2d59a1          80 LFVKPK------------------LTMEYVEQAIKK-GAKVVWFQY  106 (139)
T ss_dssp             ECSCHH------------------HHHHHHHHHHHH-TCSEEEECT
T ss_pred             EEeCHH------------------HHHHHHHHHHHh-CCCEEEEec
Confidence            664332                  155777788888 887665533

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=96.47  E-value=0.015  Score=37.04  Aligned_cols=70  Identities=16%  Similarity=0.134  Sum_probs=45.8

Q ss_pred             CCcEEEeCCcchHHH-HHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEE
Q 039049            1 MPEYCVTGGTGFIAA-HLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFH   79 (305)
Q Consensus         1 m~~ilItG~~G~iG~-~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~   79 (305)
                      .|+|-++|- |.+|. .|++.|.++|++|.+-++....  ....|...     ++++..+  .+++.    ++++|.||.
T Consensus         1 ~~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~--~t~~L~~~-----Gi~i~~g--h~~~~----i~~~d~vV~   66 (89)
T d1j6ua1           1 HMKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETE--RTAYLRKL-----GIPIFVP--HSADN----WYDPDLVIK   66 (89)
T ss_dssp             CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCH--HHHHHHHT-----TCCEESS--CCTTS----CCCCSEEEE
T ss_pred             CcEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCCh--hHHHHHHC-----CCeEEee--ecccc----cCCCCEEEE
Confidence            377888886 44444 7899999999999999887532  22223221     4555543  22222    357899998


Q ss_pred             ecccc
Q 039049           80 TASPV   84 (305)
Q Consensus        80 ~a~~~   84 (305)
                      ..|..
T Consensus        67 SsAI~   71 (89)
T d1j6ua1          67 TPAVR   71 (89)
T ss_dssp             CTTCC
T ss_pred             ecCcC
Confidence            88873

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.46  E-value=0.00097  Score=49.82  Aligned_cols=35  Identities=23%  Similarity=0.361  Sum_probs=32.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCc
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPED   37 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~   37 (305)
                      ++|.|+|+ |.+|+.++..++..|++|++.+++++.
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~   39 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDI   39 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHH
Confidence            78999997 999999999999999999999998754

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=96.40  E-value=0.0025  Score=46.48  Aligned_cols=107  Identities=21%  Similarity=0.144  Sum_probs=62.3

Q ss_pred             CcEEEeCCcchHHHH--HHHHHHHc----CCeEEEEEeCCCcccchhh-hhh-ccCccCceEEEEccCCCcchHHHHhcC
Q 039049            2 PEYCVTGGTGFIAAH--LVKALLDK----GHMVRTTVRDPEDLSKVGF-LWE-LNGAEERLKIMKADLLMEGSFDEAIQG   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~--l~~~l~~~----g~~V~~~~r~~~~~~~~~~-~~~-~~~~~~~~~~~~~D~~d~~~~~~~~~~   73 (305)
                      |||.|+|| |.+|..  ++..|+..    +.++..+++++++...... +.. ......+..+..     ..+..+++++
T Consensus         3 mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~-----~td~~eaL~d   76 (171)
T d1obba1           3 VKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEK-----TMNLDDVIID   76 (171)
T ss_dssp             CEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEE-----ESCHHHHHTT
T ss_pred             cEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEE-----eCChhhcccC
Confidence            68999997 888865  34445432    4589999988764432111 111 111111222222     2346778899


Q ss_pred             CCEEEEeccccccCCCCchh------------------------hhhhhhhHHHHHHHHHHHHhc
Q 039049           74 VDGVFHTASPVLVPYDNNIQ------------------------ATLIDPCIKGTLNVLSSCKKA  114 (305)
Q Consensus        74 ~d~Vi~~a~~~~~~~~~~~~------------------------~~~~~~n~~~~~~l~~~~~~~  114 (305)
                      +|+|++.++......+.+..                        ......|+...+.+++.+++.
T Consensus        77 ad~Vv~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~  141 (171)
T d1obba1          77 ADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKL  141 (171)
T ss_dssp             CSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHH
T ss_pred             CCeEeeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHH
Confidence            99999998875432110000                        001234788888899888887

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=96.39  E-value=0.017  Score=41.74  Aligned_cols=78  Identities=14%  Similarity=0.242  Sum_probs=47.8

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcC-CeEEEEEeCCCcccchhhhhhccCccCceEEEEc-----------cCCCcchHH
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKG-HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKA-----------DLLMEGSFD   68 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-----------D~~d~~~~~   68 (305)
                      |++|.|-| .|-||+.+++.|..++ .+|+++.......... .+...     +......           .+.-...+.
T Consensus         1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~-~l~~~-----~~~~~~~~~~~~~~~~~~~~~v~g~~~   73 (171)
T d1cf2o1           1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVSKTRPDFEAR-MALKK-----GYDLYVAIPERVKLFEKAGIEVAGTVD   73 (171)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHH-HHHHT-----TCCEEESSGGGHHHHHHTTCCCCEEHH
T ss_pred             CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEecCCcHHHHH-HHHhc-----CCceEecccccceeecccCcccCCChh
Confidence            89999998 7999999999998776 5777776543322111 11111     1111111           111122455


Q ss_pred             HHhcCCCEEEEeccccc
Q 039049           69 EAIQGVDGVFHTASPVL   85 (305)
Q Consensus        69 ~~~~~~d~Vi~~a~~~~   85 (305)
                      .++.++|+||-|-|...
T Consensus        74 ~~~~~vDvViEcTG~f~   90 (171)
T d1cf2o1          74 DMLDEADIVIDCTPEGI   90 (171)
T ss_dssp             HHHHTCSEEEECCSTTH
T ss_pred             HhhcCCCEEEEccCCCC
Confidence            66778999999988854

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=96.37  E-value=0.0018  Score=44.56  Aligned_cols=34  Identities=15%  Similarity=0.185  Sum_probs=31.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPE   36 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~   36 (305)
                      ++++|+|| |+||..++..|.+.|.+|+++.|.+.
T Consensus        27 ~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~   60 (125)
T d1ojta2          27 GKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDG   60 (125)
T ss_dssp             SEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeecc
Confidence            57999997 99999999999999999999988764

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.35  E-value=0.018  Score=39.82  Aligned_cols=29  Identities=21%  Similarity=0.306  Sum_probs=24.0

Q ss_pred             cEEEeCCcchHHHHHHHHHHHc-CCeEEEE
Q 039049            3 EYCVTGGTGFIAAHLVKALLDK-GHMVRTT   31 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~-g~~V~~~   31 (305)
                      ||.|+|++|-+|+.+++.+.+. ++++.+.
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~   30 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAE   30 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEE
Confidence            6999999999999999988764 4666554

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.28  E-value=0.0021  Score=47.15  Aligned_cols=73  Identities=14%  Similarity=0.089  Sum_probs=47.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCc---chHHHHhc--CCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME---GSFDEAIQ--GVD   75 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~---~~~~~~~~--~~d   75 (305)
                      .+|+|+|+ |.+|...++.+...|. +|+++++++.+......+        +...+ .|..+.   +.+.++..  ++|
T Consensus        29 ~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~l--------Ga~~~-i~~~~~~~~~~v~~~t~g~G~D   98 (174)
T d1jqba2          29 SSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFY--------GATDI-LNYKNGHIEDQVMKLTNGKGVD   98 (174)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHH--------TCSEE-ECGGGSCHHHHHHHHTTTSCEE
T ss_pred             CEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHhh--------Ccccc-ccccchhHHHHHHHHhhccCcc
Confidence            47999986 9999999999988896 799998876544333222        22111 233332   33344433  589


Q ss_pred             EEEEecccc
Q 039049           76 GVFHTASPV   84 (305)
Q Consensus        76 ~Vi~~a~~~   84 (305)
                      +||.+++..
T Consensus        99 ~vid~~g~~  107 (174)
T d1jqba2          99 RVIMAGGGS  107 (174)
T ss_dssp             EEEECSSCT
T ss_pred             eEEEccCCH
Confidence            999998863

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=96.27  E-value=0.0019  Score=50.84  Aligned_cols=34  Identities=21%  Similarity=0.259  Sum_probs=31.2

Q ss_pred             CCc---EEEeCCcchHHHHHHHHHHHcCCeEEEEEeCC
Q 039049            1 MPE---YCVTGGTGFIAAHLVKALLDKGHMVRTTVRDP   35 (305)
Q Consensus         1 m~~---ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~   35 (305)
                      |++   |+|+|| |.+|..++.+|+++|.+|+++.++.
T Consensus         1 m~~~~DvvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           1 MKRHYEAVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             CCSEEEEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CCccCCEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            775   999997 9999999999999999999998864

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.26  E-value=0.0014  Score=48.72  Aligned_cols=36  Identities=14%  Similarity=0.206  Sum_probs=32.8

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCc
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPED   37 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~   37 (305)
                      +++|.|+|+ |.+|+.++..++..|++|++++++++.
T Consensus         4 I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~   39 (186)
T d1wdka3           4 VKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHG   39 (186)
T ss_dssp             CSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence            478999997 999999999999999999999998754

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=96.25  E-value=0.005  Score=44.89  Aligned_cols=82  Identities=15%  Similarity=-0.006  Sum_probs=53.0

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCc-----cCceEE-------EEccC--CCcchHH
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGA-----EERLKI-------MKADL--LMEGSFD   68 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~-------~~~D~--~d~~~~~   68 (305)
                      +|+|+|| |-.|.+-++.....|.+|++++.+.........+......     ....+.       ...+.  ...+.+.
T Consensus        31 ~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~~l~  109 (183)
T d1l7da1          31 RVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVL  109 (183)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHHHHH
T ss_pred             EEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHHHHH
Confidence            7999997 9999999999999999999999988765544433111100     000000       00011  1234566


Q ss_pred             HHhcCCCEEEEeccccc
Q 039049           69 EAIQGVDGVFHTASPVL   85 (305)
Q Consensus        69 ~~~~~~d~Vi~~a~~~~   85 (305)
                      +.+.++|+||-.+-...
T Consensus       110 ~~l~~aDlVI~talipG  126 (183)
T d1l7da1         110 KELVKTDIAITTALIPG  126 (183)
T ss_dssp             HHHTTCSEEEECCCCTT
T ss_pred             HHHHhhhhheeeeecCC
Confidence            77789999998887765

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.21  E-value=0.0032  Score=46.05  Aligned_cols=71  Identities=11%  Similarity=0.102  Sum_probs=43.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEE-EEeCCCcccchhhhhhccCccCce-EEEEccCCCcchHHH---Hhc-CCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRT-TVRDPEDLSKVGFLWELNGAEERL-KIMKADLLMEGSFDE---AIQ-GVD   75 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~d~~~~~~---~~~-~~d   75 (305)
                      .+|+|+|+ |.+|...++.+...|.+++. ..+++.+.+....+        +. +++  |..+.+..++   +.. ++|
T Consensus        30 ~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~--------Ga~~~i--~~~~~~~~~~i~~~t~gg~D   98 (174)
T d1f8fa2          30 SSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL--------GATHVI--NSKTQDPVAAIKEITDGGVN   98 (174)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH--------TCSEEE--ETTTSCHHHHHHHHTTSCEE
T ss_pred             CEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHHc--------CCeEEE--eCCCcCHHHHHHHHcCCCCc
Confidence            47999997 99999999998888876554 45554433222221        12 233  3334333333   322 589


Q ss_pred             EEEEeccc
Q 039049           76 GVFHTASP   83 (305)
Q Consensus        76 ~Vi~~a~~   83 (305)
                      +||.+.+.
T Consensus        99 ~vid~~G~  106 (174)
T d1f8fa2          99 FALESTGS  106 (174)
T ss_dssp             EEEECSCC
T ss_pred             EEEEcCCc
Confidence            99999876

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.19  E-value=0.012  Score=42.93  Aligned_cols=73  Identities=16%  Similarity=0.067  Sum_probs=45.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhhhhhccCccCceEEEE-ccCCC--cchHHHHh--cCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGFLWELNGAEERLKIMK-ADLLM--EGSFDEAI--QGVD   75 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~D~~d--~~~~~~~~--~~~d   75 (305)
                      .+|+|+|+ |.||...++.+...|. +|++..+++.+.+....+        +...+. ..-.+  .+.+.+..  .++|
T Consensus        30 ~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~--------Ga~~~i~~~~~~~~~~~~~~~~~~~G~d  100 (174)
T d1e3ia2          30 STCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKAL--------GATDCLNPRELDKPVQDVITELTAGGVD  100 (174)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT--------TCSEEECGGGCSSCHHHHHHHHHTSCBS
T ss_pred             CEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHh--------CCCcccCCccchhhhhhhHhhhhcCCCc
Confidence            47999985 9999999999999997 677777776644332222        222222 11111  11222222  3799


Q ss_pred             EEEEeccc
Q 039049           76 GVFHTASP   83 (305)
Q Consensus        76 ~Vi~~a~~   83 (305)
                      +||.++|.
T Consensus       101 ~vie~~G~  108 (174)
T d1e3ia2         101 YSLDCAGT  108 (174)
T ss_dssp             EEEESSCC
T ss_pred             EEEEeccc
Confidence            99999887

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.18  E-value=0.0064  Score=44.39  Aligned_cols=74  Identities=14%  Similarity=0.081  Sum_probs=46.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC-CeEEEEEeCCCcccchhhhhhccCccCceEEEE--ccCCC-cchHHHHh--cCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG-HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMK--ADLLM-EGSFDEAI--QGVD   75 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~D~~d-~~~~~~~~--~~~d   75 (305)
                      .+|+|.|+ |.+|...+..+...| .+|+++++++.+.+....+        ......  .+-.+ .+...+..  .++|
T Consensus        30 dtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~--------Ga~~~i~~~~~~~~~~~~~~~~~~~G~D  100 (176)
T d2jhfa2          30 STCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV--------GATECVNPQDYKKPIQEVLTEMSNGGVD  100 (176)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT--------TCSEEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred             CEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHh--------CCeeEEecCCchhHHHHHHHHHhcCCCC
Confidence            47999998 668999999998888 5888888887654433222        122222  22222 11222222  2799


Q ss_pred             EEEEecccc
Q 039049           76 GVFHTASPV   84 (305)
Q Consensus        76 ~Vi~~a~~~   84 (305)
                      +||.+.+..
T Consensus       101 ~vid~~G~~  109 (176)
T d2jhfa2         101 FSFEVIGRL  109 (176)
T ss_dssp             EEEECSCCH
T ss_pred             EEEecCCch
Confidence            999998773

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=96.15  E-value=0.0033  Score=42.86  Aligned_cols=34  Identities=21%  Similarity=0.142  Sum_probs=31.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPE   36 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~   36 (305)
                      ++|+|+|| |++|..++..|...|.+|+++.|.+.
T Consensus        23 ~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          23 STVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            57999997 99999999999999999999998764

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=96.11  E-value=0.0031  Score=48.92  Aligned_cols=33  Identities=30%  Similarity=0.312  Sum_probs=30.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDP   35 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~   35 (305)
                      ++|+|+|| |..|...+..|+++|++|+++.|+.
T Consensus         7 ~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           7 KRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            57999997 9999999999999999999999864

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=96.09  E-value=0.015  Score=39.05  Aligned_cols=72  Identities=18%  Similarity=0.132  Sum_probs=51.1

Q ss_pred             CcEEEeCC----------cchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHh
Q 039049            2 PEYCVTGG----------TGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAI   71 (305)
Q Consensus         2 ~~ilItG~----------~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~   71 (305)
                      ++|||+|+          --|-+.+.++.|.+.|++++.++-+|+.-.....         -..-+...-...+.+.+++
T Consensus         5 kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d---------~aD~lYfeplt~e~v~~Ii   75 (121)
T d1a9xa4           5 EKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYD---------TSDRLYFEPVTLEDVLEIV   75 (121)
T ss_dssp             CEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTT---------SSSEEECCCCSHHHHHHHH
T ss_pred             CEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChh---------hcCceEEccCCHHHHHHHH
Confidence            68999998          3478999999999999999999988875543211         1223334445566777776


Q ss_pred             c--CCCEEEEecc
Q 039049           72 Q--GVDGVFHTAS   82 (305)
Q Consensus        72 ~--~~d~Vi~~a~   82 (305)
                      +  ++|.|+-..|
T Consensus        76 ~~E~p~~ii~~~G   88 (121)
T d1a9xa4          76 RIEKPKGVIVQYG   88 (121)
T ss_dssp             HHHCCSEEECSSS
T ss_pred             HHhCCCEEEeehh
Confidence            4  7888874443

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.08  E-value=0.0067  Score=44.21  Aligned_cols=73  Identities=12%  Similarity=0.082  Sum_probs=44.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHh-----cCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAI-----QGVD   75 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-----~~~d   75 (305)
                      .+|+|.|+ |.+|...++.+...|. .|++.++++.+.+....+        +...+.-.-.+.+.+.+.+     .++|
T Consensus        30 ~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~l--------Ga~~~i~~~~~~~~~~~~~~~~~~~g~D  100 (176)
T d2fzwa2          30 SVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF--------GATECINPQDFSKPIQEVLIEMTDGGVD  100 (176)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH--------TCSEEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred             CEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHh--------CCcEEEeCCchhhHHHHHHHHHcCCCCc
Confidence            47999997 6789999999988996 566666665543322222        2222221111222233332     2689


Q ss_pred             EEEEeccc
Q 039049           76 GVFHTASP   83 (305)
Q Consensus        76 ~Vi~~a~~   83 (305)
                      +||.+.|.
T Consensus       101 ~vid~~G~  108 (176)
T d2fzwa2         101 YSFECIGN  108 (176)
T ss_dssp             EEEECSCC
T ss_pred             EeeecCCC
Confidence            99999876

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=96.02  E-value=0.039  Score=35.56  Aligned_cols=70  Identities=17%  Similarity=0.126  Sum_probs=45.3

Q ss_pred             CCcEEEeCCcchHH-HHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEE
Q 039049            1 MPEYCVTGGTGFIA-AHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFH   79 (305)
Q Consensus         1 m~~ilItG~~G~iG-~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~   79 (305)
                      +++|.++|. |.+| +.|++.|.++|++|.+-++....  ....+..     .++.+..++-  ++    .++++|.||.
T Consensus         8 ~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~--~~~~L~~-----~Gi~v~~g~~--~~----~i~~~d~vV~   73 (96)
T d1p3da1           8 VQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGV--VTQRLAQ-----AGAKIYIGHA--EE----HIEGASVVVV   73 (96)
T ss_dssp             CCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSH--HHHHHHH-----TTCEEEESCC--GG----GGTTCSEEEE
T ss_pred             CCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCCh--hhhHHHH-----CCCeEEECCc--cc----cCCCCCEEEE
Confidence            367888875 4444 67899999999999999887532  1222221     1455555432  22    2457899998


Q ss_pred             ecccc
Q 039049           80 TASPV   84 (305)
Q Consensus        80 ~a~~~   84 (305)
                      ..|..
T Consensus        74 S~AI~   78 (96)
T d1p3da1          74 SSAIK   78 (96)
T ss_dssp             CTTSC
T ss_pred             CCCcC
Confidence            88773

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=96.01  E-value=0.0036  Score=50.53  Aligned_cols=35  Identities=26%  Similarity=0.411  Sum_probs=31.6

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPE   36 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~   36 (305)
                      +|+|+|+|| |+-|...|..|++.|++|+++-++..
T Consensus         2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            589999996 99999999999999999999977653

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=96.00  E-value=0.019  Score=42.72  Aligned_cols=63  Identities=17%  Similarity=0.103  Sum_probs=46.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      ++|.|+| .|-||+.+++.|..-|.+|++.++.......           ..+        +..++.+++..+|+|+.+.
T Consensus        46 ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~-----------~~~--------~~~~l~~l~~~~D~v~~~~  105 (199)
T d1dxya1          46 QTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPMKGDH-----------PDF--------DYVSLEDLFKQSDVIDLHV  105 (199)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSSCC-----------TTC--------EECCHHHHHHHCSEEEECC
T ss_pred             eeeeeee-cccccccccccccccceeeeccCCccchhhh-----------cch--------hHHHHHHHHHhcccceeee
Confidence            6799999 5999999999999999999999876542211           011        1234777888889888776


Q ss_pred             ccc
Q 039049           82 SPV   84 (305)
Q Consensus        82 ~~~   84 (305)
                      ...
T Consensus       106 plt  108 (199)
T d1dxya1         106 PGI  108 (199)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            554

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.00  E-value=0.017  Score=42.51  Aligned_cols=64  Identities=13%  Similarity=-0.033  Sum_probs=46.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      ++|.|+| .|.||+.+++.|..-|.+|+..++.......            ..       ...+.+++++..+|+|+.++
T Consensus        45 ~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~------------~~-------~~~~~l~ell~~sDii~i~~  104 (188)
T d1sc6a1          45 KKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKLPLG------------NA-------TQVQHLSDLLNMSDVVSLHV  104 (188)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCCCT------------TC-------EECSCHHHHHHHCSEEEECC
T ss_pred             eEEEEee-cccchhhhhhhcccccceEeeccccccchhh------------hh-------hhhhhHHHHHhhccceeecc
Confidence            5788998 6999999999999999999999876432211            00       11235778888889888777


Q ss_pred             cccc
Q 039049           82 SPVL   85 (305)
Q Consensus        82 ~~~~   85 (305)
                      ....
T Consensus       105 plt~  108 (188)
T d1sc6a1         105 PENP  108 (188)
T ss_dssp             CSST
T ss_pred             cCCc
Confidence            6544

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=95.92  E-value=0.0037  Score=44.28  Aligned_cols=36  Identities=19%  Similarity=0.255  Sum_probs=30.7

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHc--CCeEEEEEeCCC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDK--GHMVRTTVRDPE   36 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~--g~~V~~~~r~~~   36 (305)
                      ||+|.|.|+||-||....+-+.+.  .++|.+++-+..
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N   38 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKN   38 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSC
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCc
Confidence            899999999999999999988876  368888876543

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.91  E-value=0.0065  Score=43.85  Aligned_cols=36  Identities=19%  Similarity=0.088  Sum_probs=31.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcc
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDL   38 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~   38 (305)
                      .+|+|.|+ |-+|...++.+...|.+|+++++++.+.
T Consensus        29 ~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~   64 (166)
T d1llua2          29 QWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKL   64 (166)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred             CEEEEeec-cccHHHHHHHHHHcCCccceecchhhHH
Confidence            47999886 9999999998888999999999886644

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.87  E-value=0.046  Score=39.43  Aligned_cols=77  Identities=16%  Similarity=0.217  Sum_probs=47.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC-CeEEEEEeCCCcccchhhhhhccCccCceEEEEcc-----------CCCcchHHH
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG-HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKAD-----------LLMEGSFDE   69 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D-----------~~d~~~~~~   69 (305)
                      +||.|-| .|-||+.+++.+..++ .+|+++.-..+.. ....+...     ++.....+           +.....+..
T Consensus         3 irIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~~~-~~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (172)
T d2czca2           3 VKVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKPDF-EAYRAKEL-----GIPVYAASEEFIPRFEKEGFEVAGTLND   75 (172)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSCSH-HHHHHHHT-----TCCEEESSGGGHHHHHHHTCCCSCBHHH
T ss_pred             EEEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCChH-HHHHhhhc-----CceeecccccceeeecccCccccchhhh
Confidence            5899999 5999999999998765 5788776532221 11111111     11121111           122334666


Q ss_pred             HhcCCCEEEEeccccc
Q 039049           70 AIQGVDGVFHTASPVL   85 (305)
Q Consensus        70 ~~~~~d~Vi~~a~~~~   85 (305)
                      +++++|+||-|.|...
T Consensus        76 ~~~~vDvViEcTG~f~   91 (172)
T d2czca2          76 LLEKVDIIVDATPGGI   91 (172)
T ss_dssp             HHTTCSEEEECCSTTH
T ss_pred             hhccCCEEEECCCCCC
Confidence            6779999999998854

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=95.86  E-value=0.011  Score=43.03  Aligned_cols=74  Identities=11%  Similarity=0.042  Sum_probs=48.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC-CeEEEEEeCCCcccchhhhhhccCccCceEEEE--ccCCC-cchHHHHh--cCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG-HMVRTTVRDPEDLSKVGFLWELNGAEERLKIMK--ADLLM-EGSFDEAI--QGVD   75 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~D~~d-~~~~~~~~--~~~d   75 (305)
                      .+|+|+|+ |-+|...++.+...| .+|+++++++++.+....+        +...+.  -|-.+ .+.+.+..  .++|
T Consensus        31 ~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~--------GA~~~in~~~~~~~~~~~~~~~~g~G~d  101 (176)
T d1d1ta2          31 STCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAV--------GATECISPKDSTKPISEVLSEMTGNNVG  101 (176)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHH--------TCSEEECGGGCSSCHHHHHHHHHTSCCC
T ss_pred             CEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhc--------CCcEEECccccchHHHHHHHHhccccce
Confidence            46999986 999999999999999 4899999888765433332        222222  12111 12233333  3799


Q ss_pred             EEEEecccc
Q 039049           76 GVFHTASPV   84 (305)
Q Consensus        76 ~Vi~~a~~~   84 (305)
                      +||.+.+..
T Consensus       102 ~vi~~~g~~  110 (176)
T d1d1ta2         102 YTFEVIGHL  110 (176)
T ss_dssp             EEEECSCCH
T ss_pred             EEEEeCCch
Confidence            999998773

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.86  E-value=0.0051  Score=44.00  Aligned_cols=65  Identities=23%  Similarity=0.126  Sum_probs=46.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      |+++|+| .|.+|+.+++.|...|.+|++..++|....+..                .|-.....+++++...|+||-+.
T Consensus        25 k~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~----------------~dG~~v~~~~~a~~~adivvtaT   87 (163)
T d1li4a1          25 KVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINALQAA----------------MEGYEVTTMDEACQEGNIFVTTT   87 (163)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH----------------HTTCEECCHHHHTTTCSEEEECS
T ss_pred             CEEEEec-cccccHHHHHHHHhCCCeeEeeecccchhHHhh----------------cCceEeeehhhhhhhccEEEecC
Confidence            6889998 899999999999999999999987764322111                12222234667777788888776


Q ss_pred             cc
Q 039049           82 SP   83 (305)
Q Consensus        82 ~~   83 (305)
                      +.
T Consensus        88 Gn   89 (163)
T d1li4a1          88 GC   89 (163)
T ss_dssp             SC
T ss_pred             CC
Confidence            64

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.82  E-value=0.0055  Score=45.33  Aligned_cols=34  Identities=12%  Similarity=0.079  Sum_probs=30.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPE   36 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~   36 (305)
                      +||+|+|| |..|...+..|++.|+ +|+++.|++.
T Consensus         5 ~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           5 AKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            78999997 9999999999999998 5999988754

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=95.80  E-value=0.0057  Score=44.80  Aligned_cols=34  Identities=21%  Similarity=0.234  Sum_probs=31.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPE   36 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~   36 (305)
                      |+|+|+|| |..|...+..|+++||+|+++.+++.
T Consensus        44 k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          44 KNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             cEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence            68999997 99999999999999999999988754

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=95.73  E-value=0.0076  Score=41.36  Aligned_cols=92  Identities=10%  Similarity=0.034  Sum_probs=58.1

Q ss_pred             cEEEeCCcchHHHHHHHHHHH-cCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc-CCCEEEEe
Q 039049            3 EYCVTGGTGFIAAHLVKALLD-KGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ-GVDGVFHT   80 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-~~d~Vi~~   80 (305)
                      +|+|.|| |.+|+.|++++.. .+++++++.-+.......        .-.++.++.     .+.+.++.+ .+++++-+
T Consensus         5 ~v~I~Ga-G~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G~--------~I~Gi~V~~-----~~~l~~~~~~~i~iai~~   70 (126)
T d2dt5a2           5 GLCIVGM-GRLGSALADYPGFGESFELRGFFDVDPEKVGR--------PVRGGVIEH-----VDLLPQRVPGRIEIALLT   70 (126)
T ss_dssp             EEEEECC-SHHHHHHHHCSCCCSSEEEEEEEESCTTTTTC--------EETTEEEEE-----GGGHHHHSTTTCCEEEEC
T ss_pred             eEEEEcC-CHHHHHHHHhHhhcCCcEEEEEEeCchHhcCC--------EECCEEEec-----HHHHHHHHhhcccEEEEe
Confidence            6999996 9999999998753 478999987765422110        011445442     345666654 45555544


Q ss_pred             ccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccce
Q 039049           81 ASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCS  127 (305)
Q Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  127 (305)
                      ....                  ..+.+++.|.+. +++.+..++...
T Consensus        71 i~~~------------------~~~~I~d~l~~~-gIk~I~~f~~~~   98 (126)
T d2dt5a2          71 VPRE------------------AAQKAADLLVAA-GIKGILNFAPVV   98 (126)
T ss_dssp             SCHH------------------HHHHHHHHHHHH-TCCEEEECSSSC
T ss_pred             CCHH------------------HHHHHHHHHHHc-CCCEEeecCcee
Confidence            3221                  134677788888 998888776644

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=95.72  E-value=0.02  Score=38.81  Aligned_cols=73  Identities=16%  Similarity=0.154  Sum_probs=53.7

Q ss_pred             CcEEEeCC----------cchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHh
Q 039049            2 PEYCVTGG----------TGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAI   71 (305)
Q Consensus         2 ~~ilItG~----------~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~   71 (305)
                      +||||+|+          --|-+.+.++.|.+.|++++.++-+++.-......         ..-+...-...+.+.+++
T Consensus         8 kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d~---------aD~lYfePlt~e~v~~Ii   78 (127)
T d1a9xa3           8 KSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEM---------ADATYIEPIHWEVVRKII   78 (127)
T ss_dssp             CEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGG---------SSEEECSCCCHHHHHHHH
T ss_pred             CEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChhh---------cceeeeecCCHHHHHHHH
Confidence            68999998          45789999999999999999999888765432221         123344556677788887


Q ss_pred             c--CCCEEEEeccc
Q 039049           72 Q--GVDGVFHTASP   83 (305)
Q Consensus        72 ~--~~d~Vi~~a~~   83 (305)
                      +  ++|.|+-..|-
T Consensus        79 ~~E~pd~il~~~GG   92 (127)
T d1a9xa3          79 EKERPDAVLPTMGG   92 (127)
T ss_dssp             HHHCCSEEECSSSH
T ss_pred             HHhCcCCeEEEeee
Confidence            5  89998855443

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.67  E-value=0.0044  Score=45.86  Aligned_cols=74  Identities=16%  Similarity=0.054  Sum_probs=43.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEE-EEeCCCcccchhhhhhccCccCceEEEEccCCCcc---hHHHHh-cCCCE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRT-TVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG---SFDEAI-QGVDG   76 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~~~~~~-~~~d~   76 (305)
                      .+|||+||+|-+|+..++.+...|.++++ .++++++...   +....    +... ..|..+.+   .+.++. +++|+
T Consensus        32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~---l~~~~----gad~-vi~~~~~~~~~~~~~~~~~GvDv  103 (187)
T d1vj1a2          32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLF---LTSEL----GFDA-AVNYKTGNVAEQLREACPGGVDV  103 (187)
T ss_dssp             CEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHH---HHHHS----CCSE-EEETTSSCHHHHHHHHCTTCEEE
T ss_pred             CEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhh---hhhcc----cceE-EeeccchhHHHHHHHHhccCceE
Confidence            46999999999999999988888976544 4444332211   11111    1111 22333322   233332 26999


Q ss_pred             EEEeccc
Q 039049           77 VFHTASP   83 (305)
Q Consensus        77 Vi~~a~~   83 (305)
                      ||.+.|.
T Consensus       104 v~D~vGg  110 (187)
T d1vj1a2         104 YFDNVGG  110 (187)
T ss_dssp             EEESSCH
T ss_pred             EEecCCc
Confidence            9999864

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=95.66  E-value=0.0028  Score=47.19  Aligned_cols=67  Identities=12%  Similarity=-0.036  Sum_probs=46.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      +++.|+| .|-||+.+++.|..-|.+|++.++.........                ......+++.+++..+|+|+.+.
T Consensus        50 ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~----------------~~~~~~~~l~~ll~~sD~i~~~~  112 (193)
T d1mx3a1          50 ETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSDGVERA----------------LGLQRVSTLQDLLFHSDCVTLHC  112 (193)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCTTHHHH----------------HTCEECSSHHHHHHHCSEEEECC
T ss_pred             ceEEEec-cccccccceeeeeccccceeeccCcccccchhh----------------hccccccchhhccccCCEEEEee
Confidence            6899998 599999999999999999999987654321110                01112335777788888887776


Q ss_pred             cccc
Q 039049           82 SPVL   85 (305)
Q Consensus        82 ~~~~   85 (305)
                      ....
T Consensus       113 plt~  116 (193)
T d1mx3a1         113 GLNE  116 (193)
T ss_dssp             CCCT
T ss_pred             cccc
Confidence            5543

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.58  E-value=0.0007  Score=49.93  Aligned_cols=36  Identities=17%  Similarity=0.137  Sum_probs=30.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCccc
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLS   39 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~   39 (305)
                      |+|+|+|+ |..+++++..|.+.| +|+++.|+.++..
T Consensus        19 k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~   54 (177)
T d1nvta1          19 KNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAE   54 (177)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHH
T ss_pred             CEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHH
Confidence            68999996 889999999997766 9999999876544

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.57  E-value=0.012  Score=43.41  Aligned_cols=68  Identities=15%  Similarity=-0.008  Sum_probs=47.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      +++.|+| .|-||+.+++.|..-|.+|...+|...........               .+.....+.++++++|+|+.+.
T Consensus        45 ~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~---------------~~~~~~~l~~~l~~sD~v~~~~  108 (188)
T d2naca1          45 MHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKEL---------------NLTWHATREDMYPVCDVVTLNC  108 (188)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHH---------------TCEECSSHHHHGGGCSEEEECS
T ss_pred             cceeecc-ccccchhhhhhhhccCceEEEEeeccccccccccc---------------cccccCCHHHHHHhccchhhcc
Confidence            5788888 59999999999999999999998875432221111               1112345677788888887666


Q ss_pred             cccc
Q 039049           82 SPVL   85 (305)
Q Consensus        82 ~~~~   85 (305)
                      ....
T Consensus       109 plt~  112 (188)
T d2naca1         109 PLHP  112 (188)
T ss_dssp             CCCT
T ss_pred             cccc
Confidence            5543

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=95.54  E-value=0.0046  Score=49.46  Aligned_cols=34  Identities=21%  Similarity=0.302  Sum_probs=31.2

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDP   35 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~   35 (305)
                      |..|+|+|| |+.|..+|+.|++.|++|.++-+++
T Consensus         1 M~dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~   34 (298)
T d1i8ta1           1 MYDYIIVGS-GLFGAVCANELKKLNKKVLVIEKRN   34 (298)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred             CccEEEECC-cHHHHHHHHHHHhCCCcEEEEECCC
Confidence            788999997 9999999999999999999997654

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=95.52  E-value=0.0067  Score=47.09  Aligned_cols=34  Identities=26%  Similarity=0.318  Sum_probs=31.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPE   36 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~   36 (305)
                      +||+|+|| |..|..++..|++.|++|+++-|++.
T Consensus         5 ~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           5 DRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            68999997 99999999999999999999987654

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.50  E-value=0.0056  Score=48.49  Aligned_cols=34  Identities=21%  Similarity=0.150  Sum_probs=31.4

Q ss_pred             CC-cEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCC
Q 039049            1 MP-EYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDP   35 (305)
Q Consensus         1 m~-~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~   35 (305)
                      || +|+|+|| |..|..++..|.+.|++|.++-|++
T Consensus         1 mk~~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~   35 (292)
T d1k0ia1           1 MKTQVAIIGA-GPSGLLLGQLLHKAGIDNVILERQT   35 (292)
T ss_dssp             CBCSEEEECC-SHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             CCCCEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            77 6999997 9999999999999999999998765

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=95.47  E-value=0.017  Score=41.94  Aligned_cols=72  Identities=14%  Similarity=-0.041  Sum_probs=46.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhhhhhccCccCceEEEEccCC--C--cchHHHHh--cCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLL--M--EGSFDEAI--QGV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~--d--~~~~~~~~--~~~   74 (305)
                      .+|+|+|+ |.+|...++.+...|. +|+++++++++.+....+        +.+.+. |..  |  .+...+..  .++
T Consensus        29 ~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~l--------Ga~~~i-~~~~~d~~~~~~~~~~~~~G~   98 (174)
T d1p0fa2          29 STCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIEL--------GATECL-NPKDYDKPIYEVICEKTNGGV   98 (174)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHT--------TCSEEE-CGGGCSSCHHHHHHHHTTSCB
T ss_pred             CEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHHc--------CCcEEE-cCCCchhHHHHHHHHhcCCCC
Confidence            47999996 9999999999999995 788888877654433222        222222 222  2  12222222  268


Q ss_pred             CEEEEeccc
Q 039049           75 DGVFHTASP   83 (305)
Q Consensus        75 d~Vi~~a~~   83 (305)
                      |+||.+++.
T Consensus        99 d~vid~~g~  107 (174)
T d1p0fa2          99 DYAVECAGR  107 (174)
T ss_dssp             SEEEECSCC
T ss_pred             cEEEEcCCC
Confidence            999999876

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.44  E-value=0.012  Score=43.30  Aligned_cols=66  Identities=15%  Similarity=0.043  Sum_probs=46.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      +++.|+| .|-||+.+++.+..-|.+|++.++......... .        .+        ....+.+++.++|+|+.+.
T Consensus        45 k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~-~--------~~--------~~~~l~ell~~sDiv~~~~  106 (184)
T d1ygya1          45 KTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQ-L--------GI--------ELLSLDDLLARADFISVHL  106 (184)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHHHHHH-H--------TC--------EECCHHHHHHHCSEEEECC
T ss_pred             eeeeecc-ccchhHHHHHHhhhccceEEeecCCCChhHHhh-c--------Cc--------eeccHHHHHhhCCEEEEcC
Confidence            5788888 599999999999988999999987654322110 0        11        1234677888889888776


Q ss_pred             cccc
Q 039049           82 SPVL   85 (305)
Q Consensus        82 ~~~~   85 (305)
                      ....
T Consensus       107 Plt~  110 (184)
T d1ygya1         107 PKTP  110 (184)
T ss_dssp             CCST
T ss_pred             CCCc
Confidence            6544

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.36  E-value=0.016  Score=41.47  Aligned_cols=55  Identities=15%  Similarity=0.151  Sum_probs=42.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      |+|+|+|-+..+|+.|+..|.++|..|+.......                             .+.+...+.|+||.++
T Consensus        38 K~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~-----------------------------~l~~~~~~ADivI~a~   88 (166)
T d1b0aa1          38 LNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK-----------------------------NLRHHVENADLLIVAV   88 (166)
T ss_dssp             CEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS-----------------------------CHHHHHHHCSEEEECS
T ss_pred             ceEEEEeccccccHHHHHHHHHhhccccccccccc-----------------------------hhHHHHhhhhHhhhhc
Confidence            78999999999999999999999998887733221                             2344455678888888


Q ss_pred             cccc
Q 039049           82 SPVL   85 (305)
Q Consensus        82 ~~~~   85 (305)
                      |...
T Consensus        89 G~p~   92 (166)
T d1b0aa1          89 GKPG   92 (166)
T ss_dssp             CCTT
T ss_pred             cCcc
Confidence            7644

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=95.36  E-value=0.018  Score=39.98  Aligned_cols=32  Identities=19%  Similarity=0.100  Sum_probs=28.2

Q ss_pred             CcEEEeCCc---chHHHHHHHHHHHcCCeEEEEEe
Q 039049            2 PEYCVTGGT---GFIAAHLVKALLDKGHMVRTTVR   33 (305)
Q Consensus         2 ~~ilItG~~---G~iG~~l~~~l~~~g~~V~~~~r   33 (305)
                      ++|.|+|++   +-.|..+.+.|.+.|++++.+.-
T Consensus        14 ksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~   48 (136)
T d1iuka_          14 KTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNP   48 (136)
T ss_dssp             CEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECG
T ss_pred             CeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEe
Confidence            579999998   67999999999999999988743

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=95.34  E-value=0.011  Score=42.14  Aligned_cols=34  Identities=24%  Similarity=0.236  Sum_probs=28.2

Q ss_pred             cEEEe-CCcchHHHHHHHHHHHcCCeEEEEEeCCC
Q 039049            3 EYCVT-GGTGFIAAHLVKALLDKGHMVRTTVRDPE   36 (305)
Q Consensus         3 ~ilIt-G~~G~iG~~l~~~l~~~g~~V~~~~r~~~   36 (305)
                      .++|. .|.||+|..+++.|++.|.+|+++.+.+.
T Consensus        41 ~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          41 RVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             EEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             ceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            45555 23499999999999999999999998764

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=95.27  E-value=0.008  Score=47.52  Aligned_cols=33  Identities=18%  Similarity=0.234  Sum_probs=30.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDP   35 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~   35 (305)
                      |+|+|+|| |.-|...+..|++.|++|+++-+++
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            67999997 9999999999999999999997654

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.24  E-value=0.0065  Score=45.22  Aligned_cols=33  Identities=21%  Similarity=0.245  Sum_probs=28.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPE   36 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~   36 (305)
                      |||.|+| .||+|..++..| +.|++|++++-++.
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~~   33 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILPS   33 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCHH
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECCHH
Confidence            6799997 699999999766 57999999987654

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.23  E-value=0.016  Score=42.77  Aligned_cols=68  Identities=13%  Similarity=-0.006  Sum_probs=47.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      +++.|+| .|-||+.+++.+..-|.+|.+.++...........               .....+++.+++..+|+|+.+.
T Consensus        48 ~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~---------------~~~~~~~l~~ll~~sD~v~l~~  111 (191)
T d1gdha1          48 KTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRASSSDEASY---------------QATFHDSLDSLLSVSQFFSLNA  111 (191)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHH---------------TCEECSSHHHHHHHCSEEEECC
T ss_pred             cceEEee-cccchHHHHHHHHhhccccccccccccccchhhcc---------------cccccCCHHHHHhhCCeEEecC
Confidence            6789999 59999999999999999999997765432211100               0111245778888888887766


Q ss_pred             cccc
Q 039049           82 SPVL   85 (305)
Q Consensus        82 ~~~~   85 (305)
                      ....
T Consensus       112 plt~  115 (191)
T d1gdha1         112 PSTP  115 (191)
T ss_dssp             CCCT
T ss_pred             CCCc
Confidence            5543

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=95.22  E-value=0.0098  Score=43.15  Aligned_cols=34  Identities=21%  Similarity=0.089  Sum_probs=29.2

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCC--eEEEEEeCC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGH--MVRTTVRDP   35 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~   35 (305)
                      .|||+|+|| |++|..++..|.+.+.  +|+++.+++
T Consensus         2 gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           2 GRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            479999997 9999999999999885  788887665

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.08  E-value=0.036  Score=39.81  Aligned_cols=34  Identities=21%  Similarity=0.152  Sum_probs=29.7

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRD   34 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~   34 (305)
                      .|+|+|+|-+..+|+.|+..|+++|..|+.....
T Consensus        39 Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~   72 (170)
T d1a4ia1          39 GRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK   72 (170)
T ss_dssp             TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             cceEEEEecCCccchHHHHHHHhccCceEEEecc
Confidence            3789999999999999999999999988887443

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=95.03  E-value=0.033  Score=36.75  Aligned_cols=35  Identities=20%  Similarity=0.024  Sum_probs=29.5

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPE   36 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~   36 (305)
                      .|+|+|+|+ |--|.-++..|+...-+|+...|+..
T Consensus        32 gK~VlVVG~-g~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          32 GESVLVVGG-ASSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             TCCEEEECS-SHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             CCeEEEECC-CCCHHHHHHHHHHhcCEEEEEEecCc
Confidence            378999996 99999999999988878777777654

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.99  E-value=0.019  Score=41.49  Aligned_cols=116  Identities=12%  Similarity=0.008  Sum_probs=62.0

Q ss_pred             CcEEEeCC-cchHHHHHHHHHHHcC----CeEEEEEeCCCc--ccchhhhhh--ccCccCceEEEEccCCCcchHHHHhc
Q 039049            2 PEYCVTGG-TGFIAAHLVKALLDKG----HMVRTTVRDPED--LSKVGFLWE--LNGAEERLKIMKADLLMEGSFDEAIQ   72 (305)
Q Consensus         2 ~~ilItG~-~G~iG~~l~~~l~~~g----~~V~~~~r~~~~--~~~~~~~~~--~~~~~~~~~~~~~D~~d~~~~~~~~~   72 (305)
                      +||.|+|| +.+.+..++..+....    -++..++.++..  .........  ......+.....     ..+..+.++
T Consensus         2 ~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~-----~td~~~al~   76 (169)
T d1s6ya1           2 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHL-----TLDRRRALD   76 (169)
T ss_dssp             EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEE-----ESCHHHHHT
T ss_pred             cEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeee-----cCCchhhcC
Confidence            68999997 3345566666555432    378888776542  111111110  010111122222     233566788


Q ss_pred             CCCEEEEeccccccCCCCch------------------hhhhhhhhHHHHHHHHHHHHhcCCccEEEEe
Q 039049           73 GVDGVFHTASPVLVPYDNNI------------------QATLIDPCIKGTLNVLSSCKKAKSVKRVVLT  123 (305)
Q Consensus        73 ~~d~Vi~~a~~~~~~~~~~~------------------~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  123 (305)
                      ++|+||..|+......+...                  .......|+...+.+++.+++. ....++..
T Consensus        77 gaDvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~-~pda~~i~  144 (169)
T d1s6ya1          77 GADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEEL-CPDAWLIN  144 (169)
T ss_dssp             TCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEE
T ss_pred             CCCEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhc-CCCeEEEE
Confidence            99999999997653211000                  0112346777788888888887 44444443

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=94.98  E-value=0.011  Score=46.92  Aligned_cols=34  Identities=18%  Similarity=0.091  Sum_probs=30.7

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDP   35 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~   35 (305)
                      .|||+|+|| |.-|...+..|++.|++|+++-+++
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            389999997 9999999999999999999997654

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=94.93  E-value=0.018  Score=38.77  Aligned_cols=34  Identities=21%  Similarity=0.344  Sum_probs=28.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHH---cCCeEEEEEeCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLD---KGHMVRTTVRDPE   36 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~---~g~~V~~~~r~~~   36 (305)
                      ++++|+|| |++|-.++..|.+   .|.+|+++.|++.
T Consensus        19 ~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~   55 (117)
T d1feca2          19 KRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDM   55 (117)
T ss_dssp             SEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred             CeEEEECC-ChHHHHHHHHhHhhcccccccceeccccc
Confidence            58999997 9999999987655   3789999998764

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=94.93  E-value=0.042  Score=39.57  Aligned_cols=34  Identities=12%  Similarity=0.160  Sum_probs=26.1

Q ss_pred             CC--cEEEeCCcchHHHHHHHHHHHc-CCeEEEEEeCC
Q 039049            1 MP--EYCVTGGTGFIAAHLVKALLDK-GHMVRTTVRDP   35 (305)
Q Consensus         1 m~--~ilItG~~G~iG~~l~~~l~~~-g~~V~~~~r~~   35 (305)
                      |+  ||.|.| +|.+|+.+++.|.+. +.+++++....
T Consensus         1 M~kirvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~   37 (170)
T d1f06a1           1 MTNIRVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRR   37 (170)
T ss_dssp             CCCEEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESS
T ss_pred             CCcceEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEecc
Confidence            54  579999 599999999999875 46777665443

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=94.92  E-value=0.012  Score=47.68  Aligned_cols=35  Identities=23%  Similarity=0.220  Sum_probs=30.5

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHcC--CeEEEEEeCCC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDKG--HMVRTTVRDPE   36 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~g--~~V~~~~r~~~   36 (305)
                      ||+|+|+|| |.-|...+..|+++|  ++|+++-|+..
T Consensus         4 ~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           4 IRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            689999997 999999999998876  69999988753

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=94.91  E-value=0.011  Score=41.67  Aligned_cols=35  Identities=17%  Similarity=0.108  Sum_probs=30.0

Q ss_pred             CCcEEEeCCcchHHHHHHHHHHHc--CCeEEEEEeCC
Q 039049            1 MPEYCVTGGTGFIAAHLVKALLDK--GHMVRTTVRDP   35 (305)
Q Consensus         1 m~~ilItG~~G~iG~~l~~~l~~~--g~~V~~~~r~~   35 (305)
                      ||+|.|.|+||-||....+-+.+.  .++|.+++-+.
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~   38 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR   38 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC
Confidence            689999999999999999998775  47898887654

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.89  E-value=0.014  Score=43.28  Aligned_cols=33  Identities=15%  Similarity=0.072  Sum_probs=28.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC--CeEEEEEeCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG--HMVRTTVRDP   35 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g--~~V~~~~r~~   35 (305)
                      |||+|+|| |++|..++..|.+.+  .+|+++.|++
T Consensus         1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            67999997 999999999998874  5788888764

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=94.74  E-value=0.069  Score=40.95  Aligned_cols=106  Identities=16%  Similarity=0.127  Sum_probs=59.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhh----------------h-hhccCccCceEEEEccC-C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGF----------------L-WELNGAEERLKIMKADL-L   62 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~----------------~-~~~~~~~~~~~~~~~D~-~   62 (305)
                      .+|+|+|+ |.+|++++..|+..|. ++++++.+.-..+....                . ..+...++.+.+...+. .
T Consensus        31 ~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~~~~  109 (247)
T d1jw9b_          31 SRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL  109 (247)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred             CCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhhhhh
Confidence            57999995 9999999999999996 67777544221111100                0 00111123444444332 2


Q ss_pred             CcchHHHHhcCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccce
Q 039049           63 MEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCS  127 (305)
Q Consensus        63 d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  127 (305)
                      +.......+.+.|+||.+...                 ......+-+.|.+. +++ +|+.+...
T Consensus       110 ~~~~~~~~~~~~divid~~d~-----------------~~~~~~in~~~~~~-~ip-~i~g~~~~  155 (247)
T d1jw9b_         110 DDAELAALIAEHDLVLDCTDN-----------------VAVRNQLNAGCFAA-KVP-LVSGAAIR  155 (247)
T ss_dssp             CHHHHHHHHHTSSEEEECCSS-----------------HHHHHHHHHHHHHH-TCC-EEEEEEEB
T ss_pred             hhccccccccccceeeeccch-----------------hhhhhhHHHHHHHh-CCC-cccccccc
Confidence            334455666788999876422                 11133445566676 654 66654433

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.73  E-value=0.014  Score=41.92  Aligned_cols=72  Identities=19%  Similarity=0.098  Sum_probs=45.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCC---cchHHHHhcCCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLM---EGSFDEAIQGVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d---~~~~~~~~~~~d~Vi   78 (305)
                      .+|+|.|+ |-+|...++.+...|.+|+++++++++......+        ++..+. |..+   .+.+.+...+.+.+|
T Consensus        29 ~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~~--------Ga~~~~-~~~~~~~~~~~~~~~~~~~~~v   98 (168)
T d1rjwa2          29 EWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKEL--------GADLVV-NPLKEDAAKFMKEKVGGVHAAV   98 (168)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT--------TCSEEE-CTTTSCHHHHHHHHHSSEEEEE
T ss_pred             CEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhhhc--------Ccceec-ccccchhhhhcccccCCCceEE
Confidence            47889875 9999999999999999999998876643322211        233332 2222   223444455677777


Q ss_pred             Eeccc
Q 039049           79 HTASP   83 (305)
Q Consensus        79 ~~a~~   83 (305)
                      .+++.
T Consensus        99 ~~~~~  103 (168)
T d1rjwa2          99 VTAVS  103 (168)
T ss_dssp             ESSCC
T ss_pred             eecCC
Confidence            66543

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=94.69  E-value=0.019  Score=40.75  Aligned_cols=66  Identities=18%  Similarity=0.115  Sum_probs=47.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      |+++|+| -|.+|+-+++.|...|.+|++.-.+|-...+..        .++++        ...+.++++..|+||-+-
T Consensus        24 k~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~--------mdGf~--------v~~~~~a~~~aDi~vTaT   86 (163)
T d1v8ba1          24 KIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQAV--------MEGFN--------VVTLDEIVDKGDFFITCT   86 (163)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH--------TTTCE--------ECCHHHHTTTCSEEEECC
T ss_pred             CEEEEec-ccccchhHHHHHHhCCCEEEEEecCchhhHHHH--------hcCCc--------cCchhHccccCcEEEEcC
Confidence            6888998 799999999999999999999977764322210        11222        334667777788888766


Q ss_pred             ccc
Q 039049           82 SPV   84 (305)
Q Consensus        82 ~~~   84 (305)
                      |..
T Consensus        87 Gn~   89 (163)
T d1v8ba1          87 GNV   89 (163)
T ss_dssp             SSS
T ss_pred             CCC
Confidence            553

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.66  E-value=0.014  Score=41.30  Aligned_cols=32  Identities=19%  Similarity=0.284  Sum_probs=29.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRD   34 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~   34 (305)
                      ++|||+|| |.+|..-++.|++.|.+|++++-.
T Consensus        14 krvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          14 KRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             CEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            68999998 999999999999999999999653

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=94.65  E-value=0.019  Score=41.80  Aligned_cols=34  Identities=12%  Similarity=0.163  Sum_probs=29.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPE   36 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~   36 (305)
                      ++|+|+|| |++|..++..|.+.|.+|.++.+.+.
T Consensus         4 ~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~~~   37 (185)
T d1q1ra1           4 DNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVGDA   37 (185)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred             CCEEEECC-cHHHHHHHHHHHHcCCceEEEEecCc
Confidence            57999997 99999999999999998877766543

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.58  E-value=0.028  Score=40.50  Aligned_cols=78  Identities=17%  Similarity=0.082  Sum_probs=48.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccC--CCcchHHHHhcCCCEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADL--LMEGSFDEAIQGVDGVFH   79 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~--~d~~~~~~~~~~~d~Vi~   79 (305)
                      |+++|+|-+.-+|+.|+..|+++|..|+....+.........  ...    -......|+  ...+.+++....+|+||.
T Consensus        30 K~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~~~~~lk~~~~~aDIvIs  103 (171)
T d1edza1          30 KKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGE--SLK----LNKHHVEDLGEYSEDLLKKCSLDSDVVIT  103 (171)
T ss_dssp             CEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCC--CSS----CCCCEEEEEEECCHHHHHHHHHHCSEEEE
T ss_pred             CEEEEECCccccHHHHHHHHHHCCCEEEEecccccccccccc--cee----eeeeccccccccchhHHhhccccCCEEEE
Confidence            789999999999999999999999999877543211100000  000    000011122  224457777778999998


Q ss_pred             eccccc
Q 039049           80 TASPVL   85 (305)
Q Consensus        80 ~a~~~~   85 (305)
                      .+|...
T Consensus       104 avG~p~  109 (171)
T d1edza1         104 GVPSEN  109 (171)
T ss_dssp             CCCCTT
T ss_pred             ccCCCc
Confidence            887754

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=94.49  E-value=0.016  Score=46.41  Aligned_cols=33  Identities=18%  Similarity=0.262  Sum_probs=30.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDP   35 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~   35 (305)
                      ++|+|+|| |..|...+..|+++|++|+++-+++
T Consensus        31 kkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          31 KHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             CEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            58999997 9999999999999999999996654

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=94.47  E-value=0.02  Score=43.62  Aligned_cols=34  Identities=18%  Similarity=0.273  Sum_probs=31.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPE   36 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~   36 (305)
                      ++|+|+|| |+.|...+..|++.|++|+++.++..
T Consensus        50 k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          50 DSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             ceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence            68999997 99999999999999999999977654

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=94.46  E-value=0.045  Score=40.46  Aligned_cols=73  Identities=15%  Similarity=0.088  Sum_probs=46.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcc---hHHHHhc--CCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG---SFDEAIQ--GVD   75 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~~~~~~~--~~d   75 (305)
                      .+|+|+|+ |-+|...+..+...|. +|++.++++++.+....+        +...+. |-.+.+   .+.++..  ++|
T Consensus        27 ~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~--------Ga~~~~-~~~~~~~~~~i~~~t~g~g~D   96 (195)
T d1kola2          27 STVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ--------GFEIAD-LSLDTPLHEQIAALLGEPEVD   96 (195)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT--------TCEEEE-TTSSSCHHHHHHHHHSSSCEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhhc--------cccEEE-eCCCcCHHHHHHHHhCCCCcE
Confidence            47999986 9999888888777775 788888776544332222        233332 323322   3334333  689


Q ss_pred             EEEEecccc
Q 039049           76 GVFHTASPV   84 (305)
Q Consensus        76 ~Vi~~a~~~   84 (305)
                      ++|.+.|..
T Consensus        97 ~vid~vG~~  105 (195)
T d1kola2          97 CAVDAVGFE  105 (195)
T ss_dssp             EEEECCCTT
T ss_pred             EEEECcccc
Confidence            999998843

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.41  E-value=0.0035  Score=48.16  Aligned_cols=27  Identities=22%  Similarity=0.272  Sum_probs=24.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVR   29 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~   29 (305)
                      |||+|+|| |.+|...+.+|+++|++|+
T Consensus         1 mkV~VIGa-Gi~GlstA~~L~~~G~~v~   27 (246)
T d1kifa1           1 MRVVVIGA-GVIGLSTALCIHERYHSVL   27 (246)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHHTTTS
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCCce
Confidence            67999997 9999999999999998643

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=94.41  E-value=0.02  Score=38.52  Aligned_cols=34  Identities=21%  Similarity=0.260  Sum_probs=27.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHc---CCeEEEEEeCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDK---GHMVRTTVRDPE   36 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~---g~~V~~~~r~~~   36 (305)
                      ++++|+|| |++|..++..|.+.   |.+|+++.|.+.
T Consensus        21 ~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~   57 (117)
T d1aoga2          21 RRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM   57 (117)
T ss_dssp             SEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred             CeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence            57999997 99999999777654   457999988654

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=94.32  E-value=0.033  Score=40.19  Aligned_cols=74  Identities=16%  Similarity=0.026  Sum_probs=43.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhc--CCCEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQ--GVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~Vi   78 (305)
                      .+|+|.|+ |.+|...++.+...|. .|++.++++++......+      . ..+++..+-.+.+...+...  ++|+||
T Consensus        34 ~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~------g-a~~~i~~~~~~~~~~~~~~~~~g~d~vi  105 (172)
T d1h2ba2          34 AYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERL------G-ADHVVDARRDPVKQVMELTRGRGVNVAM  105 (172)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHT------T-CSEEEETTSCHHHHHHHHTTTCCEEEEE
T ss_pred             CEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhhc------c-cceeecCcccHHHHHHHhhCCCCceEEE
Confidence            46889885 9999999998888885 666666665433322211      1 11333222111222333322  589999


Q ss_pred             Eeccc
Q 039049           79 HTASP   83 (305)
Q Consensus        79 ~~a~~   83 (305)
                      .+++.
T Consensus       106 d~~g~  110 (172)
T d1h2ba2         106 DFVGS  110 (172)
T ss_dssp             ESSCC
T ss_pred             EecCc
Confidence            99886

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=94.26  E-value=0.021  Score=45.29  Aligned_cols=33  Identities=21%  Similarity=0.551  Sum_probs=29.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDP   35 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~   35 (305)
                      .+|+|+|| |.+|..++.+|+++|+ +|+++.|+.
T Consensus         2 ~dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           2 PRIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CCEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            47999997 9999999999999996 699998874

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.24  E-value=0.031  Score=46.73  Aligned_cols=77  Identities=18%  Similarity=0.122  Sum_probs=47.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhh--hh---------------hccCccC--ceEEEEccC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGF--LW---------------ELNGAEE--RLKIMKADL   61 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~--~~---------------~~~~~~~--~~~~~~~D~   61 (305)
                      +||||+|+ |.+|.++++.|+..|. ++++++.+.-..+...+  +.               .+...++  +++....++
T Consensus        38 ~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~~i  116 (426)
T d1yovb1          38 CKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKI  116 (426)
T ss_dssp             CCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEECSCG
T ss_pred             CeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeeeccc
Confidence            47999997 7799999999999996 78888665321111100  00               0011112  344555555


Q ss_pred             CCcchHHHHhcCCCEEEEec
Q 039049           62 LMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus        62 ~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      .+..  ...++++|+||.+.
T Consensus       117 ~~~~--~~~~~~~DlVi~~~  134 (426)
T d1yovb1         117 QDFN--DTFYRQFHIIVCGL  134 (426)
T ss_dssp             GGBC--HHHHTTCSEEEECC
T ss_pred             cchH--HHHHHhcchheecc
Confidence            4433  46778999999764

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.20  E-value=0.072  Score=41.92  Aligned_cols=28  Identities=25%  Similarity=0.164  Sum_probs=24.9

Q ss_pred             CcchHHHHHHHHHHHcCCeEEEEEeCCC
Q 039049            9 GTGFIAAHLVKALLDKGHMVRTTVRDPE   36 (305)
Q Consensus         9 ~~G~iG~~l~~~l~~~g~~V~~~~r~~~   36 (305)
                      +||..|.+|++.|+.+|++|+.+.+...
T Consensus        44 SSGk~G~alA~~~~~~Ga~V~li~g~~s   71 (290)
T d1p9oa_          44 SSGRRGATSAEAFLAAGYGVLFLYRARS   71 (290)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred             CchHHHHHHHHHHHHcCCEEEEEecCCc
Confidence            3599999999999999999999987654

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=94.19  E-value=0.023  Score=40.92  Aligned_cols=78  Identities=18%  Similarity=0.128  Sum_probs=43.9

Q ss_pred             cEEEeCCcchHHHH-HHHHHHHc-----CCeEEEEEeCCCcccchhh-hhhccC-ccCceEEEEccCCCcchHHHHhcCC
Q 039049            3 EYCVTGGTGFIAAH-LVKALLDK-----GHMVRTTVRDPEDLSKVGF-LWELNG-AEERLKIMKADLLMEGSFDEAIQGV   74 (305)
Q Consensus         3 ~ilItG~~G~iG~~-l~~~l~~~-----g~~V~~~~r~~~~~~~~~~-~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~   74 (305)
                      ||.|+|| |.+|.. ++..|+..     +.++.+++.++++...... +..... .........     ..+..++++++
T Consensus         5 KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~eal~~A   78 (167)
T d1u8xx1           5 SIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAA-----TTDPEEAFTDV   78 (167)
T ss_dssp             EEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEE-----ESCHHHHHSSC
T ss_pred             eEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEe-----cCChhhccCCC
Confidence            6999998 555554 44444432     2378899887665432111 111100 011222222     22467788999


Q ss_pred             CEEEEecccccc
Q 039049           75 DGVFHTASPVLV   86 (305)
Q Consensus        75 d~Vi~~a~~~~~   86 (305)
                      |+||..|+....
T Consensus        79 D~Vvitag~~~~   90 (167)
T d1u8xx1          79 DFVMAHIRVGKY   90 (167)
T ss_dssp             SEEEECCCTTHH
T ss_pred             CEEEECCCcCCC
Confidence            999999998653

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=94.18  E-value=0.11  Score=37.23  Aligned_cols=73  Identities=15%  Similarity=0.126  Sum_probs=44.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCc----chHHHHh--cCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLME----GSFDEAI--QGV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~----~~~~~~~--~~~   74 (305)
                      .+|+|+|+ |-+|...+..+...|. +|+++++++++.+....+        +...+. |..+.    +...+..  .++
T Consensus        30 ~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~--------GAd~~i-n~~~~~~~~~~~~~~~~~~G~   99 (175)
T d1cdoa2          30 STCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVF--------GATDFV-NPNDHSEPISQVLSKMTNGGV   99 (175)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT--------TCCEEE-CGGGCSSCHHHHHHHHHTSCB
T ss_pred             CEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHHc--------CCcEEE-cCCCcchhHHHHHHhhccCCc
Confidence            47999997 5577777777777764 788888877654433222        222222 22211    2233333  279


Q ss_pred             CEEEEecccc
Q 039049           75 DGVFHTASPV   84 (305)
Q Consensus        75 d~Vi~~a~~~   84 (305)
                      |+||.+.|..
T Consensus       100 d~vid~~G~~  109 (175)
T d1cdoa2         100 DFSLECVGNV  109 (175)
T ss_dssp             SEEEECSCCH
T ss_pred             ceeeeecCCH
Confidence            9999998863

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.17  E-value=0.027  Score=39.06  Aligned_cols=34  Identities=26%  Similarity=0.373  Sum_probs=28.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHH----HcCCeEEEEEeCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALL----DKGHMVRTTVRDPE   36 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~----~~g~~V~~~~r~~~   36 (305)
                      ++++|+|| ||+|..++..|.    +.|.+|+.+.+++.
T Consensus        38 k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~   75 (137)
T d1m6ia2          38 KSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKG   75 (137)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEeccccc
Confidence            57999997 999999999885    35889999987654

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=94.14  E-value=0.016  Score=42.24  Aligned_cols=32  Identities=25%  Similarity=0.265  Sum_probs=26.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRD   34 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~   34 (305)
                      .+|+|+|| |++|-+++..|.+.|.+|.++.++
T Consensus         4 a~VvIIGg-G~~G~e~A~~l~~~g~~v~i~~~~   35 (183)
T d1d7ya1           4 APVVVLGA-GLASVSFVAELRQAGYQGLITVVG   35 (183)
T ss_dssp             SSEEEECC-SHHHHHHHHHHHHHTCCSCEEEEE
T ss_pred             CCEEEECc-cHHHHHHHHHHHhcCCceEEEEEe
Confidence            36999996 999999999999999876665544

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=94.13  E-value=0.024  Score=44.40  Aligned_cols=31  Identities=16%  Similarity=0.030  Sum_probs=28.8

Q ss_pred             EEEeCCcchHHHHHHHHHHHcCCeEEEEEeCC
Q 039049            4 YCVTGGTGFIAAHLVKALLDKGHMVRTTVRDP   35 (305)
Q Consensus         4 ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~   35 (305)
                      |+|+|| |..|..++.+|+++|++|+++.+..
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            899997 9999999999999999999998754

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.12  E-value=0.064  Score=39.84  Aligned_cols=33  Identities=21%  Similarity=0.286  Sum_probs=28.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDP   35 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~   35 (305)
                      |||+++| ++..|..+.+.|.+.|++|.++.-.+
T Consensus         1 MkI~~~G-~~~~~~~~l~~L~~~~~~i~~V~t~p   33 (203)
T d2bw0a2           1 MKIAVIG-QSLFGQEVYCHLRKEGHEVVGVFTVP   33 (203)
T ss_dssp             CEEEEEC-CHHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHCCCcEEEEEcCC
Confidence            6799998 57889999999999999998876543

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=94.11  E-value=0.0038  Score=46.70  Aligned_cols=34  Identities=21%  Similarity=0.248  Sum_probs=29.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPE   36 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~   36 (305)
                      ++|+|-| .|-+|+++++.|.+.|.+|++.+.+..
T Consensus        28 k~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~   61 (201)
T d1c1da1          28 LTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTE   61 (201)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHH
Confidence            6899998 699999999999999999998866543

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=94.10  E-value=0.17  Score=36.10  Aligned_cols=82  Identities=15%  Similarity=0.114  Sum_probs=48.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccC----ceEE------------EEccCCCcc
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEE----RLKI------------MKADLLMEG   65 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~----~~~~------------~~~D~~d~~   65 (305)
                      |||.|=| -|-||+.+.+.|..++.+|.++.-. .+.+....+.....-++    .++.            ....-.+++
T Consensus         1 ikigING-fGRIGR~~~R~l~~~~i~iv~INd~-~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p~   78 (168)
T d2g82a1           1 MKVGING-FGRIGRQVFRILHSRGVEVALINDL-TDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPK   78 (168)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCEEEEECS-SCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGG
T ss_pred             CEEEEEC-CcHHHHHHHHHHhcCCCEEEEECCC-cchhhhhheeecccccCccccccccccceeEecceeEEEEecCChH
Confidence            5688887 5999999999999999999888743 34444444433222111    1110            011112333


Q ss_pred             hHHHHhcCCCEEEEeccccc
Q 039049           66 SFDEAIQGVDGVFHTASPVL   85 (305)
Q Consensus        66 ~~~~~~~~~d~Vi~~a~~~~   85 (305)
                      .+.=.-.++|+|+-|-|...
T Consensus        79 ~i~W~~~gvdiViEcTG~f~   98 (168)
T d2g82a1          79 EIPWAEAGVGVVIESTGVFT   98 (168)
T ss_dssp             GCCTGGGTEEEEEECSSSCC
T ss_pred             HCcccccCCceeEecccccc
Confidence            33222237899999998865

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=93.97  E-value=0.0086  Score=42.52  Aligned_cols=36  Identities=17%  Similarity=0.230  Sum_probs=23.7

Q ss_pred             EEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccc
Q 039049            4 YCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSK   40 (305)
Q Consensus         4 ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~   40 (305)
                      |-++| +|.+|+++++.|.+.++.+.+.+|++++...
T Consensus         2 IgfIG-~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~   37 (153)
T d2i76a2           2 LNFVG-TGTLTRFFLECLKDRYEIGYILSRSIDRARN   37 (153)
T ss_dssp             CEEES-CCHHHHHHHHTTC----CCCEECSSHHHHHH
T ss_pred             EEEEe-CcHHHHHHHHHHHhCCCEEEEEeCChhhhcc
Confidence            34677 6999999999886644444678887765443

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=93.84  E-value=0.028  Score=40.12  Aligned_cols=32  Identities=22%  Similarity=0.266  Sum_probs=27.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDP   35 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~   35 (305)
                      .||+|+|| |++|.+++..|. ++.+|+++.|.+
T Consensus         1 ~rVvIIGg-G~~G~e~A~~l~-~~~~Vtvv~~~~   32 (167)
T d1xhca1           1 SKVVIVGN-GPGGFELAKQLS-QTYEVTVIDKEP   32 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred             CeEEEECC-cHHHHHHHHHHH-cCCCEEEEeccc
Confidence            37999997 999999999885 578999998754

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=93.84  E-value=0.24  Score=35.25  Aligned_cols=82  Identities=12%  Similarity=0.169  Sum_probs=48.1

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCcc----CceEE------------EEccCCCcch
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAE----ERLKI------------MKADLLMEGS   66 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~----~~~~~------------~~~D~~d~~~   66 (305)
                      ||.|-| -|-||+.+.+.+++++.+|.++.-...+.+....+.+...-+    ..++.            ....-.++++
T Consensus         2 kIgING-fGRIGR~~~R~~~~~~~~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p~~   80 (169)
T d1dssg1           2 KIGING-FGRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPEN   80 (169)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred             eEEEEC-CcHHHHHHHHHHHhCCCcEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCChHH
Confidence            677877 699999999999999999888865433333333333322111    11111            0111123333


Q ss_pred             HHHHhcCCCEEEEeccccc
Q 039049           67 FDEAIQGVDGVFHTASPVL   85 (305)
Q Consensus        67 ~~~~~~~~d~Vi~~a~~~~   85 (305)
                      +.=.-.++|+||-|-|...
T Consensus        81 i~W~~~gvD~ViEcTG~f~   99 (169)
T d1dssg1          81 IPWSKAGAEYIVESTGVFT   99 (169)
T ss_dssp             CCHHHHTCCEEEECSSSCC
T ss_pred             CCccccCCCEEEecCceEc
Confidence            2211227899999999865

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.76  E-value=0.029  Score=42.72  Aligned_cols=31  Identities=23%  Similarity=0.185  Sum_probs=28.5

Q ss_pred             EEEeCCcchHHHHHHHHHHHcCCeEEEEEeCC
Q 039049            4 YCVTGGTGFIAAHLVKALLDKGHMVRTTVRDP   35 (305)
Q Consensus         4 ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~   35 (305)
                      |+|+|| |..|...+..|++.|++|.++-+++
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            799995 9999999999999999999997764

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.49  E-value=0.18  Score=43.22  Aligned_cols=111  Identities=10%  Similarity=0.059  Sum_probs=61.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCCcccchhh-----------------hhhccCccCc--eEEEEccC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPEDLSKVGF-----------------LWELNGAEER--LKIMKADL   61 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~-----------------~~~~~~~~~~--~~~~~~D~   61 (305)
                      .+|+|+|+ |.+|.++++.|+-.|. ++++++.+.-.......                 ...+...++.  ++.+..+.
T Consensus        26 s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v~i~~~~~~~  104 (529)
T d1yova1          26 AHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEESP  104 (529)
T ss_dssp             CEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTSBCCEESSCH
T ss_pred             CCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCCcEEEEcCCc
Confidence            47999997 7899999999999995 77777543221111100                 0011111222  23333322


Q ss_pred             CCc-chHHHHhcCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeecc
Q 039049           62 LME-GSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYR  132 (305)
Q Consensus        62 ~d~-~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~  132 (305)
                      .+. +.-...+.++|+||.+...                 ......+.+.|++. ++ .||+.++.+.+|..
T Consensus       105 ~~~~~~~~~~~~~~dvVv~~~~~-----------------~~~~~~l~~~c~~~-~i-p~i~~~~~G~~G~v  157 (529)
T d1yova1         105 ENLLDNDPSFFCRFTVVVATQLP-----------------ESTSLRLADVLWNS-QI-PLLICRTYGLVGYM  157 (529)
T ss_dssp             HHHHHSCGGGGGGCSEEEEESCC-----------------HHHHHHHHHHHHHH-TC-CEEEEEEETTEEEE
T ss_pred             hhhhhhHHHHhcCCCEEEECCCC-----------------HHHHHHHHHHHHHc-CC-CEEEEeccCCEEEE
Confidence            110 0011235578999966321                 22244567778887 76 48888877766643

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.45  E-value=0.046  Score=42.40  Aligned_cols=34  Identities=21%  Similarity=0.182  Sum_probs=30.0

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPE   36 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~   36 (305)
                      ++|+|+|| |..|..++..|.+.|. +|.++-|++.
T Consensus         2 ~~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           2 IDILIAGA-GIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            57999997 9999999999999995 8999988654

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=93.28  E-value=0.044  Score=42.09  Aligned_cols=33  Identities=21%  Similarity=0.242  Sum_probs=29.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDP   35 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~   35 (305)
                      ++|+|+|| |..|...+..|.++|+ +|+++-+++
T Consensus         1 P~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           1 PRVIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CCEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            47999997 9999999999999996 799997654

>d1k3ta1 c.2.1.3 (A:1-164,A:334-359) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=92.99  E-value=0.37  Score=35.04  Aligned_cols=43  Identities=21%  Similarity=0.220  Sum_probs=29.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC-----CeEEEEEeCCCcccchhhhh
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG-----HMVRTTVRDPEDLSKVGFLW   45 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g-----~~V~~~~r~~~~~~~~~~~~   45 (305)
                      +||.|=| -|-||+.+.+.+.+++     .+|.++.-...+.+....+.
T Consensus         3 ikigING-FGRIGR~vlR~~~~~~~~~~~i~iv~Ind~~~~~~~~ayLl   50 (190)
T d1k3ta1           3 IKVGING-FGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQM   50 (190)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHTTCBTTTEEEEEEEESCCCHHHHHHHH
T ss_pred             eEEEEEC-CChHHHHHHHHHHHcCCCCCCeEEEEEecCCCCHHHHHHHh
Confidence            5899988 6999999999998764     25666654433444444433

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=92.98  E-value=0.2  Score=37.00  Aligned_cols=79  Identities=15%  Similarity=0.103  Sum_probs=45.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccc---hhhhhhccCccCceEEEE-ccCCCcchHHHHhc-CCCE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSK---VGFLWELNGAEERLKIMK-ADLLMEGSFDEAIQ-GVDG   76 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~~~~~-~D~~d~~~~~~~~~-~~d~   76 (305)
                      |||+++|. +-.|..+.+.|.+.|++|.++.-.+++...   ...+.... ...++.++. .++.+.+.++.+.+ ++|+
T Consensus         1 Mkiv~~~~-~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a-~~~~i~~~~~~~~~~~~~~~~i~~~~~Dl   78 (203)
T d2blna2           1 MKTVVFAY-HDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLA-AERGIPVYAPDNVNHPLWVERIAQLSPDV   78 (203)
T ss_dssp             CEEEEEEC-HHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHH-HHHTCCEECCSCCCSHHHHHHHHHTCCSE
T ss_pred             CeEEEEec-CHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHH-HHcCCcceecccccchhhhhhhhhhcccc
Confidence            56888875 668999999999999999877643322110   00011100 011455555 45666554444333 7898


Q ss_pred             EEEecc
Q 039049           77 VFHTAS   82 (305)
Q Consensus        77 Vi~~a~   82 (305)
                      +|.+..
T Consensus        79 ii~~g~   84 (203)
T d2blna2          79 IFSFYY   84 (203)
T ss_dssp             EEEESC
T ss_pred             eeeeec
Confidence            886654

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.90  E-value=0.05  Score=43.56  Aligned_cols=32  Identities=16%  Similarity=0.121  Sum_probs=28.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRD   34 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~   34 (305)
                      .||+|+|| |.-|...+..|.+.|++|+++=++
T Consensus         6 ~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           6 GKVIIIGS-GVSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             CEEEEECC-BHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence            47999997 999999999999999999999544

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=92.46  E-value=0.28  Score=37.30  Aligned_cols=32  Identities=16%  Similarity=0.084  Sum_probs=28.7

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRD   34 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~   34 (305)
                      ++|+|-| .|-+|+++++.|.+.|.+|++++-+
T Consensus        32 ~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD~   63 (242)
T d1v9la1          32 KTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSDI   63 (242)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCeEEEeecc
Confidence            6889998 6999999999999999999988754

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=92.43  E-value=0.19  Score=39.23  Aligned_cols=32  Identities=19%  Similarity=0.249  Sum_probs=28.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRD   34 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~   34 (305)
                      ++|+|-| .|-+|+++++.|.+.|.+|++++-+
T Consensus        37 ktvaIqG-fGnVG~~~A~~L~e~Gakvv~vsD~   68 (293)
T d1hwxa1          37 KTFAVQG-FGNVGLHSMRYLHRFGAKCVAVGES   68 (293)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEcc
Confidence            5788988 5999999999999999999998754

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=91.80  E-value=0.082  Score=41.81  Aligned_cols=33  Identities=21%  Similarity=0.281  Sum_probs=29.7

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCC
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPE   36 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~   36 (305)
                      .|+|+|| |+.|...+.+|.+.|.+|+++-+.+.
T Consensus         9 dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~~   41 (298)
T d1w4xa1           9 DVLVVGA-GFSGLYALYRLRELGRSVHVIETAGD   41 (298)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence            5899997 99999999999999999999977654

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.46  E-value=0.11  Score=41.62  Aligned_cols=31  Identities=29%  Similarity=0.294  Sum_probs=28.4

Q ss_pred             EEEeCCcchHHHHHHHHHHHcCCeEEEEEeCC
Q 039049            4 YCVTGGTGFIAAHLVKALLDKGHMVRTTVRDP   35 (305)
Q Consensus         4 ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~   35 (305)
                      |+|+|| |..|...+..|++.|++|+++-++.
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            789996 9999999999999999999997654

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=90.82  E-value=0.12  Score=39.25  Aligned_cols=33  Identities=18%  Similarity=0.171  Sum_probs=29.8

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCC
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPE   36 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~   36 (305)
                      -|+|+|| |..|...+..|++.|++|.++.+++.
T Consensus         4 DViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~   36 (251)
T d2i0za1           4 DVIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNK   36 (251)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            3899997 99999999999999999999987654

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.57  E-value=0.15  Score=35.75  Aligned_cols=34  Identities=24%  Similarity=0.097  Sum_probs=28.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-eEEEEEeCCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-MVRTTVRDPE   36 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-~V~~~~r~~~   36 (305)
                      ++|+|+|| |.+|...+..+++.|. .|+++.|.+.
T Consensus        46 ~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~~   80 (153)
T d1gtea3          46 GAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKGF   80 (153)
T ss_dssp             SEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSCG
T ss_pred             CEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCCh
Confidence            57999997 9999999999999986 5778877653

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=90.35  E-value=2  Score=30.16  Aligned_cols=82  Identities=12%  Similarity=0.112  Sum_probs=47.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC-CeEEEEEeCCCcccchhhhhhccCccC----ceEEE------------EccCCCc
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG-HMVRTTVRDPEDLSKVGFLWELNGAEE----RLKIM------------KADLLME   64 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~----~~~~~------------~~D~~d~   64 (305)
                      +||.|-| -|-||+.+.+.+.++. .+|.++.- ..+.+....+.....-++    .+.+-            ...-.++
T Consensus         2 ikigING-FGRIGR~v~R~~~~~~~i~ivaINd-~~~~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~p   79 (166)
T d1gado1           2 IKVGING-FGRIGRIVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDP   79 (166)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTCSSEEEEEEEC-SSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred             eEEEEEC-CcHHHHHHHHHHhhCCCeEEEEEeC-CCCHHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCCh
Confidence            5788888 6999999999999875 57777764 334444444433222111    12110            0111233


Q ss_pred             chHHHHhcCCCEEEEeccccc
Q 039049           65 GSFDEAIQGVDGVFHTASPVL   85 (305)
Q Consensus        65 ~~~~~~~~~~d~Vi~~a~~~~   85 (305)
                      +.+.=--.++|+||-|-|...
T Consensus        80 ~~i~W~~~gvDiViEcTG~f~  100 (166)
T d1gado1          80 ANLKWDEVGVDVVAEATGLFL  100 (166)
T ss_dssp             GGGCHHHHTCSEEEECSSSCC
T ss_pred             HHCCccccCCCEEEEcccccc
Confidence            332211227899999999865

>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=89.92  E-value=1.1  Score=32.60  Aligned_cols=94  Identities=18%  Similarity=0.116  Sum_probs=59.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC---eEEEEEeCCCcccchhhhhhccCccCceEEEEc-cC----------------
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH---MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKA-DL----------------   61 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-D~----------------   61 (305)
                      +||.|+| -|.-|..++..|.+.|.   +.++++-+.+.      +...+.   ......+ +.                
T Consensus         1 ~kI~viG-vGGaG~n~v~~l~~~~~~~v~~iainTD~~~------L~~~~a---~~ki~iG~~~t~G~G~g~~p~~g~~a   70 (194)
T d1w5fa1           1 LKIKVIG-VGGAGNNAINRMIEIGIHGVEFVAVNTDLQV------LEASNA---DVKIQIGENITRGLGAGGRPEIGEQA   70 (194)
T ss_dssp             CCEEEEE-EHHHHHHHHHHHHHHCCTTEEEEEEESCHHH------HHTCCC---SEEEECCTTTTTTSCCTTCHHHHHHH
T ss_pred             CeEEEEE-eCchHHHHHHHHHHcCCCceEEEEEcCCHHH------HhcCCc---ceEEecccccCCCcccccCchhhHhH
Confidence            4799999 59999999999998774   44555443321      111111   1122222 11                


Q ss_pred             --CCcchHHHHhcCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCcc
Q 039049           62 --LMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVK  118 (305)
Q Consensus        62 --~d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  118 (305)
                        .+.+.+.+.++++|.||-+||.....            -.-++-.+.+.|++. ++.
T Consensus        71 a~e~~~~I~~~l~~~d~vfi~AGlGGgT------------GtgaapviA~~ake~-g~l  116 (194)
T d1w5fa1          71 ALESEEKIREVLQDTHMVFITAGFGGGT------------GTGASPVIAKIAKEM-GIL  116 (194)
T ss_dssp             HHHTHHHHHHHTTTCSEEEEEEETTSSH------------HHHHHHHHHHHHHHT-TCE
T ss_pred             HHHHHHHHHHHhcCCCeEEEEEecCCCc------------ccchHHHHHHHHHHc-CCc
Confidence              23456778888999999999997732            233466778888887 753

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=89.88  E-value=0.16  Score=38.15  Aligned_cols=33  Identities=24%  Similarity=0.345  Sum_probs=28.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHc--CCeEEEEEeCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDK--GHMVRTTVRDP   35 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~--g~~V~~~~r~~   35 (305)
                      +||+|+|| |.-|...++.|.+.  |++|+++.+.+
T Consensus         2 ~kv~iIGa-GpaGl~aA~~L~~~~~~~~V~v~e~~~   36 (230)
T d1cjca2           2 PQICVVGS-GPAGFYTAQHLLKHHSRAHVDIYEKQL   36 (230)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSSCEEEEECSSS
T ss_pred             CeEEEECc-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            68999996 99999999999765  78999997764

>d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=89.78  E-value=1.5  Score=30.77  Aligned_cols=82  Identities=15%  Similarity=0.103  Sum_probs=44.9

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcC-CeEEEEEeCCCcccchhhhhhccCccC----ceEEE-----------E-ccCCCcc
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKG-HMVRTTVRDPEDLSKVGFLWELNGAEE----RLKIM-----------K-ADLLMEG   65 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~----~~~~~-----------~-~D~~d~~   65 (305)
                      ||.|=| -|-||+.+.+.++.+. .+|.++.-...+.+....+.+...-++    .++.-           + ..-.+++
T Consensus         2 kigING-fGRIGR~v~R~~~~~~~~~iv~INd~~~d~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~i~~~~~p~   80 (166)
T d2b4ro1           2 KLGING-FGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPS   80 (166)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEESSCEEEEECCSSGG
T ss_pred             eEEEEC-CCHHHHHHHHHHhhCCCcEEEEECCCCCChHHhhhhhhcccccccceeeeccCCceEEecCcEEEEEeCCChH
Confidence            566666 5889999999999764 577777643233333344333221111    11110           0 1113343


Q ss_pred             hHHHHhcCCCEEEEeccccc
Q 039049           66 SFDEAIQGVDGVFHTASPVL   85 (305)
Q Consensus        66 ~~~~~~~~~d~Vi~~a~~~~   85 (305)
                      .+.=.-.++|+|+-|-|...
T Consensus        81 ~i~W~~~gvdiViEcTG~f~  100 (166)
T d2b4ro1          81 QIPWGKCQVDVVCESTGVFL  100 (166)
T ss_dssp             GCCHHHHTCSEEEECSSSCC
T ss_pred             HccccccCCCEEEEeccccc
Confidence            32211228999999999865

>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]

Probab=89.68  E-value=0.43  Score=35.16  Aligned_cols=79  Identities=23%  Similarity=0.214  Sum_probs=45.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchh------hhhhccCccCceEEEEccCCCcchHHHHhc--C
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVG------FLWELNGAEERLKIMKADLLMEGSFDEAIQ--G   73 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~   73 (305)
                      |||+++| ++..+..+.+.|.+.|++|.++.-.+++.....      ..... ....++........+.+.+.+.++  +
T Consensus         4 mKI~f~G-~~~~~~~~L~~L~~~~~~i~~Vit~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (206)
T d1fmta2           4 LRIIFAG-TPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVL-AEEKGLPVFQPVSLRPQENQQLVAELQ   81 (206)
T ss_dssp             CEEEEEE-CSHHHHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHH-HHHTTCCEECCSCSCSHHHHHHHHHTT
T ss_pred             cEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEeCCCcccccCccccccchhhh-hhccCccccccccccchhhHHHHhhhc
Confidence            7799998 478899999999999999877764432211100      00000 001245555555544455555554  6


Q ss_pred             CCEEEEecc
Q 039049           74 VDGVFHTAS   82 (305)
Q Consensus        74 ~d~Vi~~a~   82 (305)
                      +|+++-+..
T Consensus        82 ~d~~v~~~~   90 (206)
T d1fmta2          82 ADVMVVVAY   90 (206)
T ss_dssp             CSEEEEESC
T ss_pred             ceEEEeecc
Confidence            787775544

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.44  E-value=0.38  Score=34.60  Aligned_cols=30  Identities=17%  Similarity=0.110  Sum_probs=24.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHc-CCeEEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDK-GHMVRTTV   32 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~-g~~V~~~~   32 (305)
                      .||.|+| +|.+|+..++.|... +.+|+++.
T Consensus         2 iki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~   32 (184)
T d1ydwa1           2 IRIGVMG-CADIARKVSRAIHLAPNATISGVA   32 (184)
T ss_dssp             EEEEEES-CCTTHHHHHHHHHHCTTEEEEEEE
T ss_pred             eEEEEEc-CCHHHHHHHHHHHhCCCCEEEEEE
Confidence            4799999 599999999999775 46777663

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=89.37  E-value=0.16  Score=41.02  Aligned_cols=30  Identities=23%  Similarity=0.106  Sum_probs=27.8

Q ss_pred             EEEeCCcchHHHHHHHHHHHcCCeEEEEEeC
Q 039049            4 YCVTGGTGFIAAHLVKALLDKGHMVRTTVRD   34 (305)
Q Consensus         4 ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~   34 (305)
                      |+|+|+ |+-|..++..|++.|++|.++-+.
T Consensus         5 VIVVGs-G~aG~v~A~rLaeaG~~VlvLEaG   34 (367)
T d1n4wa1           5 AVVIGT-GYGAAVSALRLGEAGVQTLMLEMG   34 (367)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEeCc-CHHHHHHHHHHHHCcCeEEEEecC
Confidence            789995 999999999999999999999875

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=89.08  E-value=1.3  Score=31.40  Aligned_cols=31  Identities=16%  Similarity=0.264  Sum_probs=23.5

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC----CeEEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG----HMVRTTVR   33 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g----~~V~~~~r   33 (305)
                      +||.|=| -|-||+.+.+.+++++    .+|.++.-
T Consensus         2 ikigING-fGRIGR~v~R~~~~~~~~~~~~vvaINd   36 (173)
T d1obfo1           2 IRVAING-YGRIGRNILRAHYEGGKSHDIEIVAIND   36 (173)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHTTSCSSEEEEEEEC
T ss_pred             eEEEEEC-CcHHHHHHHHHHHhCCCCCCeEEEEEcC
Confidence            5788888 6999999999998753    35655543

>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Human(Homo sapiens), liver isoform [TaxId: 9606]

Probab=88.88  E-value=1.6  Score=30.84  Aligned_cols=43  Identities=19%  Similarity=0.237  Sum_probs=29.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC-CeEEEEEeCCCcccchhhhh
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG-HMVRTTVRDPEDLSKVGFLW   45 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~~   45 (305)
                      -||.|=| -|-||+.+.+.+++++ .+|.++.-...+.+....+.
T Consensus         2 ikIgING-FGRIGR~v~R~~~~~~~~~ivaINd~~~~~~~~ayLl   45 (169)
T d1u8fo1           2 VKVGVNG-FGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMF   45 (169)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHH
T ss_pred             cEEEEEC-CcHHHHHHHHHHHHCCCcEEEEecCCCccHHHHHHHH
Confidence            3688888 6999999999998765 68877765333333344433

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=88.79  E-value=2.3  Score=29.88  Aligned_cols=81  Identities=12%  Similarity=0.090  Sum_probs=44.4

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcC---CeEEEEEeCCCcccchhhhhhccCcc----CceEE------------EEccCCC
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKG---HMVRTTVRDPEDLSKVGFLWELNGAE----ERLKI------------MKADLLM   63 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~----~~~~~------------~~~D~~d   63 (305)
                      ||.|=| -|-||+.+.+.++++.   .+|.++.-. .+.+....+.+...-+    ..++.            ....-.+
T Consensus         2 kIgING-fGRIGR~v~R~~~~~~~~~i~vvaINd~-~~~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~   79 (169)
T d1hdgo1           2 RVAING-FGRIGRLVYRIIYERKNPDIEVVAINDL-TDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPD   79 (169)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCTTCEEEEEECS-SCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSS
T ss_pred             EEEEEC-CChHHHHHHHHHHhccCCCEEEEEeccC-ccHHHHHHHHhccccccccCceEEEECCEEEECCEEEEEEeCCC
Confidence            577777 6889999999998643   577777543 3344433333322111    11111            0011123


Q ss_pred             cchHHHHhcCCCEEEEeccccc
Q 039049           64 EGSFDEAIQGVDGVFHTASPVL   85 (305)
Q Consensus        64 ~~~~~~~~~~~d~Vi~~a~~~~   85 (305)
                      ++.+.=--.++|+||-|-|...
T Consensus        80 p~~i~W~~~gvD~ViEcTG~f~  101 (169)
T d1hdgo1          80 PSKLPWKDLGVDFVIESTGVFR  101 (169)
T ss_dssp             GGGSCHHHHTCCEEEECSSSCC
T ss_pred             hhhCCccccCCCEEEEecceec
Confidence            4332211127899999999865

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=88.75  E-value=0.4  Score=33.82  Aligned_cols=76  Identities=24%  Similarity=0.152  Sum_probs=43.8

Q ss_pred             CcEEEeCCcchHHHHHHHH-HHHc-----CCeEEEEEeCCCcccchhhhhh-ccCccCceEEEEccCCCcchHHHHhcCC
Q 039049            2 PEYCVTGGTGFIAAHLVKA-LLDK-----GHMVRTTVRDPEDLSKVGFLWE-LNGAEERLKIMKADLLMEGSFDEAIQGV   74 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~-l~~~-----g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~d~~~~~~~~~~~   74 (305)
                      |||.|+|| |-+|...+-. |+..     ..++.+++.++++......+.. ....  ......     .....+.++++
T Consensus         1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~--~~~~~~-----t~~~~~~l~~a   72 (162)
T d1up7a1           1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKD--RFKVLI-----SDTFEGAVVDA   72 (162)
T ss_dssp             CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTT--SSEEEE-----CSSHHHHHTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhcc--CceEEE-----ecCcccccCCC
Confidence            67999998 6566555532 3321     3589999887665433222211 1111  222222     12345778899


Q ss_pred             CEEEEeccccc
Q 039049           75 DGVFHTASPVL   85 (305)
Q Consensus        75 d~Vi~~a~~~~   85 (305)
                      |+||..|+...
T Consensus        73 DvVVita~~~~   83 (162)
T d1up7a1          73 KYVIFQFRPGG   83 (162)
T ss_dssp             SEEEECCCTTH
T ss_pred             CEEEEecccCC
Confidence            99999998754

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=88.66  E-value=0.25  Score=36.57  Aligned_cols=31  Identities=16%  Similarity=0.139  Sum_probs=28.2

Q ss_pred             EEEeCCcchHHHHHHHHHHHcCCeEEEEEeCC
Q 039049            4 YCVTGGTGFIAAHLVKALLDKGHMVRTTVRDP   35 (305)
Q Consensus         4 ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~   35 (305)
                      ++|+|| |+.|...+..+++.|.+|.++-++.
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~~   35 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAKE   35 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEeccC
Confidence            789997 9999999999999999999997653

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=88.52  E-value=0.19  Score=40.19  Aligned_cols=32  Identities=16%  Similarity=0.177  Sum_probs=28.1

Q ss_pred             EEEeCCcchHHHHHHHHHHH-----cCCeEEEEEeCCC
Q 039049            4 YCVTGGTGFIAAHLVKALLD-----KGHMVRTTVRDPE   36 (305)
Q Consensus         4 ilItG~~G~iG~~l~~~l~~-----~g~~V~~~~r~~~   36 (305)
                      |+|+|| |..|..++..|++     .|++|+++-|++.
T Consensus        10 V~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~~   46 (360)
T d1pn0a1          10 VLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRST   46 (360)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCCC
Confidence            899997 9999999999974     6999999988654

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=88.31  E-value=0.22  Score=39.10  Aligned_cols=31  Identities=23%  Similarity=0.246  Sum_probs=28.7

Q ss_pred             EEEeCCcchHHHHHHHHHHHcCCeEEEEEeCC
Q 039049            4 YCVTGGTGFIAAHLVKALLDKGHMVRTTVRDP   35 (305)
Q Consensus         4 ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~   35 (305)
                      |+|+|| |..|...+..|++.|.+|+++.+.+
T Consensus        19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          19 VVVVGS-GGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            899996 9999999999999999999997764

>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=88.24  E-value=2.5  Score=30.93  Aligned_cols=96  Identities=22%  Similarity=0.131  Sum_probs=59.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC---eEEEEEeCCCcccchhhhhhccCccCceEEEEcc-C----------------
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH---MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKAD-L----------------   61 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D-~----------------   61 (305)
                      .||.|+| -|.-|..+++.|.+.|.   +.++++-+.+..      ...+   ....+..+. +                
T Consensus        16 ~ki~ViG-vGGaG~n~v~~l~~~~~~~v~~iainTD~~~L------~~~~---~~~ki~ig~~~t~g~Gag~~p~~g~~a   85 (209)
T d2vapa1          16 AKITVVG-CGGAGNNTITRLKMEGIEGAKTVAINTDAQQL------IRTK---ADKKILIGKKLTRGLGAGGNPKIGEEA   85 (209)
T ss_dssp             CCEEEEE-EHHHHHHHHHHHHHHTCTTEEEEEEESBHHHH------HTSC---CSEEEECCTTTTTTBCCTTCHHHHHHH
T ss_pred             CcEEEEE-eCChHHHHHHHHHHcCCCceEEEEEeCCHHHH------hcCC---cchhcccccccccccccccchHHHHHH
Confidence            3799999 49999999999998874   344554432211      1111   011122211 1                


Q ss_pred             --CCcchHHHHhcCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEE
Q 039049           62 --LMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRV  120 (305)
Q Consensus        62 --~d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~  120 (305)
                        .+.+.+.+.++++|.||-+||.....            -.-++-.+.+.+++. ++..+
T Consensus        86 a~e~~~~I~~~l~~~d~vfi~AGlGGGT------------Gsgaapvia~~ake~-g~lvv  133 (209)
T d2vapa1          86 AKESAEEIKAAIQDSDMVFITCGLGGGT------------GTGSAPVVAEISKKI-GALTV  133 (209)
T ss_dssp             HHHTHHHHHHHHTTCSEEEEEEETTSSH------------HHHHHHHHHHHHHHT-TCEEE
T ss_pred             HHHHHHHHHHhccCCCEEEEEEeCCCCc------------cccHHHHHHHHHHHc-CCcEE
Confidence              23447778888999999999997732            233355677788887 75433

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=88.11  E-value=0.27  Score=38.07  Aligned_cols=32  Identities=13%  Similarity=0.084  Sum_probs=28.8

Q ss_pred             EEEeCCcchHHHHHHHHHHHc-CCeEEEEEeCCC
Q 039049            4 YCVTGGTGFIAAHLVKALLDK-GHMVRTTVRDPE   36 (305)
Q Consensus         4 ilItG~~G~iG~~l~~~l~~~-g~~V~~~~r~~~   36 (305)
                      |+|+|| |.-|...+..|+++ |++|.++.+++.
T Consensus        36 ViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~~   68 (278)
T d1rp0a1          36 VVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSVS   68 (278)
T ss_dssp             EEEECC-SHHHHHHHHHHHTSTTSCEEEEESSSS
T ss_pred             EEEECC-CHHHHHHHHHHHHccCCeEEEEecCCC
Confidence            899997 99999999999875 999999988753

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=88.05  E-value=0.28  Score=34.50  Aligned_cols=34  Identities=24%  Similarity=0.330  Sum_probs=22.8

Q ss_pred             CcEEEeCCcchHHHHH-HHHHHHcC-CeEEEEE-eCCC
Q 039049            2 PEYCVTGGTGFIAAHL-VKALLDKG-HMVRTTV-RDPE   36 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l-~~~l~~~g-~~V~~~~-r~~~   36 (305)
                      .|+.|+| +|.+|+.+ .+.|.... .+++++. |+.+
T Consensus         5 irvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~   41 (157)
T d1nvmb1           5 LKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAA   41 (157)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTT
T ss_pred             cEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchh
Confidence            3799999 89999865 45554433 4777764 5544

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=87.94  E-value=0.22  Score=41.00  Aligned_cols=33  Identities=21%  Similarity=0.192  Sum_probs=24.8

Q ss_pred             CcEEEeC---------CcchHHHHHHHHHHHcCCeEEEEEeC
Q 039049            2 PEYCVTG---------GTGFIAAHLVKALLDKGHMVRTTVRD   34 (305)
Q Consensus         2 ~~ilItG---------~~G~iG~~l~~~l~~~g~~V~~~~r~   34 (305)
                      ||||+++         |-|-.-.+|++.|++.||+|++++..
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp~   42 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPS   42 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEecC
Confidence            6788855         44444467799999999999999743

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=87.90  E-value=0.14  Score=35.97  Aligned_cols=33  Identities=15%  Similarity=0.101  Sum_probs=27.0

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCc
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPED   37 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~   37 (305)
                      ||.++| .|.+|..+++.|++.|+.| ...|+.++
T Consensus         2 kIg~IG-lG~MG~~ma~~L~~~g~~~-~~~~~~~~   34 (156)
T d2cvza2           2 KVAFIG-LGAMGYPMAGHLARRFPTL-VWNRTFEK   34 (156)
T ss_dssp             CEEEEC-CSTTHHHHHHHHHTTSCEE-EECSSTHH
T ss_pred             eEEEEe-HHHHHHHHHHHHHhCCCEE-EEeCCHHH
Confidence            689999 5999999999999988865 56666543

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=87.72  E-value=0.28  Score=37.33  Aligned_cols=33  Identities=18%  Similarity=0.179  Sum_probs=30.1

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCC
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPE   36 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~   36 (305)
                      .|+|+|| |-.|...+..|++.|.+|.++.+++.
T Consensus         6 DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~   38 (253)
T d2gqfa1           6 ENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKK   38 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             cEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCC
Confidence            4999997 99999999999999999999988764

>d3cmco1 c.2.1.3 (O:0-148,O:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Bacillus stearothermophilus, nca 1503 [TaxId: 1422]

Probab=87.68  E-value=1.7  Score=30.75  Aligned_cols=40  Identities=20%  Similarity=0.233  Sum_probs=27.8

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcC-CeEEEEEeCCCcccchhhh
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKG-HMVRTTVRDPEDLSKVGFL   44 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~   44 (305)
                      ||.|-| -|-||+.+.+.++++. .+|.++.- +.+.+....+
T Consensus         3 kIgING-fGRIGR~v~R~~l~~~~~~ivaINd-~~d~~~~ayl   43 (171)
T d3cmco1           3 KVGING-FGRIGRNVFRAALKNPDIEVVAVND-LTDANTLAHL   43 (171)
T ss_dssp             EEEEES-CSHHHHHHHHHHTTCTTEEEEEEEC-SSCHHHHHHH
T ss_pred             EEEEEC-CCHHHHHHHHHHhhCCCcEEEEEcC-CCCHHHHhhh
Confidence            577777 5889999999998774 57777764 3344433333

>d1rm4a1 c.2.1.3 (A:1-148,A:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Spinach (Spinacia oleracea) [TaxId: 3562]

Probab=87.58  E-value=2.7  Score=29.61  Aligned_cols=31  Identities=13%  Similarity=0.156  Sum_probs=23.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcC---CeEEEEEe
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKG---HMVRTTVR   33 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g---~~V~~~~r   33 (305)
                      |||.|-| -|-||+.+.+.++++.   .+|.++.-
T Consensus         1 ikIgING-fGRIGR~v~R~~~~~~~~~i~ivaINd   34 (172)
T d1rm4a1           1 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVIND   34 (172)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHCSSCSEEEEEEEC
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEEcC
Confidence            4788888 6999999999988654   46666654

>d1uwva2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: (Uracil-5-)-methyltransferase
domain: rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain
species: Escherichia coli [TaxId: 562]

Probab=87.49  E-value=0.35  Score=39.03  Aligned_cols=96  Identities=17%  Similarity=0.051  Sum_probs=55.2

Q ss_pred             EeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcc-hHHHHhcCCCEEEEecccc
Q 039049            6 VTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG-SFDEAIQGVDGVFHTASPV   84 (305)
Q Consensus         6 ItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~-~~~~~~~~~d~Vi~~a~~~   84 (305)
                      +.+|+|.+|..|+    +.+.+|+++-.+++.......-.. .....+++++.+|..+.- ........+|+||-     
T Consensus       219 LycG~G~fsl~La----~~~~~V~gvE~~~~ai~~A~~na~-~n~i~n~~~~~~~~~~~~~~~~~~~~~~d~vil-----  288 (358)
T d1uwva2         219 LFCGMGNFTLPLA----TQAASVVGVEGVPALVEKGQQNAR-LNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLL-----  288 (358)
T ss_dssp             ESCTTTTTHHHHH----TTSSEEEEEESCHHHHHHHHHHHH-HTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEE-----
T ss_pred             ecccccccchhcc----ccccEEEeccCcHHHHHHHHHhHH-hcccccceeeecchhhhhhhhhhhhccCceEEe-----
Confidence            3578899998765    466899999776643222211111 122347899999876532 22222346788872     


Q ss_pred             ccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEecc
Q 039049           85 LVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSS  125 (305)
Q Consensus        85 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS  125 (305)
                      .|+      ..-       ...+++.+.+. +.+++||+|-
T Consensus       289 DPP------R~G-------~~~~~~~l~~~-~~~~ivYVSC  315 (358)
T d1uwva2         289 DPA------RAG-------AAGVMQQIIKL-EPIRIVYVSC  315 (358)
T ss_dssp             CCC------TTC-------CHHHHHHHHHH-CCSEEEEEES
T ss_pred             CCC------Ccc-------HHHHHHHHHHc-CCCEEEEEeC
Confidence            222      211       11234455555 6789999984

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=87.27  E-value=0.28  Score=39.47  Aligned_cols=30  Identities=20%  Similarity=0.253  Sum_probs=27.5

Q ss_pred             EEEeCCcchHHHHHHHHHHHcCCeEEEEEeC
Q 039049            4 YCVTGGTGFIAAHLVKALLDKGHMVRTTVRD   34 (305)
Q Consensus         4 ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~   34 (305)
                      ++|+|+ |.-|..++..|++.|++|.++-+.
T Consensus         7 viIVGs-G~aG~v~A~~La~~G~kVlvLEaG   36 (379)
T d2f5va1           7 VVIVGS-GPIGCTYARELVGAGYKVAMFDIG   36 (379)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHhhCCCeEEEEecC
Confidence            789995 999999999999999999999664

>d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.03  E-value=0.31  Score=36.09  Aligned_cols=32  Identities=22%  Similarity=0.373  Sum_probs=26.8

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCC--eEEEEEeCC
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGH--MVRTTVRDP   35 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~--~V~~~~r~~   35 (305)
                      +++|+|| |++|-.++..|.+.|+  +|+++++.+
T Consensus         6 ~~vIvG~-G~aG~~~A~~Lr~~~~~~~I~li~~e~   39 (213)
T d1m6ia1           6 PFLLIGG-GTAAFAAARSIRARDPGARVLIVSEDP   39 (213)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHHSTTCEEEEEESSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhcCCCCcEEEEeCCC
Confidence            4788886 9999999999998875  588887653

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=86.82  E-value=0.37  Score=35.58  Aligned_cols=31  Identities=13%  Similarity=0.053  Sum_probs=28.4

Q ss_pred             EEEeCCcchHHHHHHHHHHHcCCeEEEEEeCC
Q 039049            4 YCVTGGTGFIAAHLVKALLDKGHMVRTTVRDP   35 (305)
Q Consensus         4 ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~   35 (305)
                      ++|+|| |..|...+..+++.|.+|.++.+++
T Consensus         6 vvVIGg-GpaGl~aA~~aa~~G~kV~vie~~~   36 (221)
T d1dxla1           6 VVIIGG-GPGGYVAAIKAAQLGFKTTCIEKRG   36 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence            789997 9999999999999999999997754

>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Brevibacterium sterolicum [TaxId: 1702]

Probab=86.75  E-value=0.3  Score=39.43  Aligned_cols=30  Identities=20%  Similarity=0.147  Sum_probs=27.4

Q ss_pred             EEEeCCcchHHHHHHHHHHHcCCeEEEEEeC
Q 039049            4 YCVTGGTGFIAAHLVKALLDKGHMVRTTVRD   34 (305)
Q Consensus         4 ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~   34 (305)
                      ++|+|+ |+-|..++..|++.|++|.++=+.
T Consensus        10 vIVVGs-G~aG~v~A~rLaeaG~~VlvLEaG   39 (370)
T d3coxa1          10 ALVIGS-GYGGAVAALRLTQAGIPTQIVEMG   39 (370)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCeEEEEeCC
Confidence            789995 999999999999999999999764

>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Azotobacter vinelandii [TaxId: 354]

Probab=86.72  E-value=0.42  Score=37.18  Aligned_cols=37  Identities=32%  Similarity=0.463  Sum_probs=29.1

Q ss_pred             CCcEEEeC--Ccch--HHHHHHHHHHHcCCeEEEEEeCCCc
Q 039049            1 MPEYCVTG--GTGF--IAAHLVKALLDKGHMVRTTVRDPED   37 (305)
Q Consensus         1 m~~ilItG--~~G~--iG~~l~~~l~~~g~~V~~~~r~~~~   37 (305)
                      |++|.|.|  |.|.  +..+|+..|++.|++|.+++-+++.
T Consensus         2 Mr~IaisgKGGVGKTT~a~NLA~~LA~~G~rVLlID~DpQ~   42 (289)
T d2afhe1           2 MRQCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCDPKA   42 (289)
T ss_dssp             CEEEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEECSSS
T ss_pred             ccEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEecCCCC
Confidence            78898884  4443  4556888999999999999988753

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=86.58  E-value=0.92  Score=31.77  Aligned_cols=30  Identities=13%  Similarity=0.089  Sum_probs=26.3

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTT   31 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~   31 (305)
                      +++.|++.+|..|.-++..+...|.++--+
T Consensus         4 ~rvaiit~sGG~~~l~aD~~~~~Gl~l~~l   33 (163)
T d2csua3           4 NKVAIMTNAGGPGVLTADELDKRGLKLATL   33 (163)
T ss_dssp             SEEEEEESCHHHHHHHHHHHHTTTCEECCC
T ss_pred             CeEEEEECChHHHHHHHHHHHHcCCccCCC
Confidence            579999999999999999999999776555

>d1xk7a1 c.123.1.1 (A:4-405) Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB
species: Escherichia coli [TaxId: 562]

Probab=86.46  E-value=0.69  Score=37.82  Aligned_cols=109  Identities=6%  Similarity=0.011  Sum_probs=63.7

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhcc-CccCceEEEEccCCCcc---hHHHHhcCCCEEE
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELN-GAEERLKIMKADLLMEG---SFDEAIQGVDGVF   78 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~---~~~~~~~~~d~Vi   78 (305)
                      +|+=++ +..-|-...+.|++.|.+|+-+-+.... +..+...... ..+-+-..+..|+.+++   .+.++++++|+||
T Consensus        13 rVld~~-~~~agp~~~~~Lad~GAeVIkvE~p~~g-d~~r~~~~~~~~~n~~K~si~ldl~~~~G~~~~~~Lv~~aDv~i   90 (402)
T d1xk7a1          13 RVVFSG-IEIAGPFAGQMFAEWGAEVIWIENVAWA-DTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDIFI   90 (402)
T ss_dssp             EEEEEC-CSSHHHHHHHHHHHTTCEEEEEECSSSC-CGGGGSSSHHHHHTTTCEEEEECTTSHHHHHHHHHHHTTCSEEE
T ss_pred             EEEEeC-ChhHHHHHHHHHHHhCCeEEEECCCCCC-CccccCCchhHHhCCCCeEEEEeCcCHHHHHHHHHHHhhcCCce
Confidence            344334 3455788888889999999999653311 1111100000 11235678899998864   5677888999999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeec
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRY  131 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~  131 (305)
                      ++--+.......=.               .+.+++. + +++||+|-+. ||.
T Consensus        91 ~n~rpg~~~~lGl~---------------~~~L~~~-n-P~lI~~sisg-fG~  125 (402)
T d1xk7a1          91 EASKGPAFARRGIT---------------DEVLWQH-N-PKLVIAHLSG-FGQ  125 (402)
T ss_dssp             EECSSSHHHHTTCC---------------HHHHHHH-C-TTCEEEEEES-SCS
T ss_pred             eeeccccccccccc---------------ccchhhc-c-ccccceeeec-ccC
Confidence            99665431100001               1234444 4 6799988755 664

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=86.17  E-value=2.4  Score=29.99  Aligned_cols=31  Identities=16%  Similarity=0.260  Sum_probs=21.9

Q ss_pred             CC--cEEEeCCcchHHHH-HHHHHHHcC--CeEEEEE
Q 039049            1 MP--EYCVTGGTGFIAAH-LVKALLDKG--HMVRTTV   32 (305)
Q Consensus         1 m~--~ilItG~~G~iG~~-l~~~l~~~g--~~V~~~~   32 (305)
                      |+  +|.|+| +|.+|+. .+..+.+.+  .+|+++.
T Consensus         1 MkkirigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~   36 (181)
T d1zh8a1           1 LRKIRLGIVG-CGIAARELHLPALKNLSHLFEITAVT   36 (181)
T ss_dssp             CCCEEEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEE
T ss_pred             CCCcEEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEE
Confidence            66  689999 5999986 466676544  4677664

>d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain
species: Thermotoga maritima [TaxId: 2336]

Probab=85.86  E-value=0.56  Score=29.33  Aligned_cols=30  Identities=17%  Similarity=0.048  Sum_probs=25.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTV   32 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~   32 (305)
                      |||||+|+ |-=-.+|+..|.+..++|++.-
T Consensus         1 MkVLviGs-GgREHAia~~l~~s~~~v~~~p   30 (90)
T d1vkza2           1 VRVHILGS-GGREHAIGWAFAKQGYEVHFYP   30 (90)
T ss_dssp             CEEEEEEC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHhcCCCeEEEec
Confidence            78999995 7778899999998888988873

>d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=85.79  E-value=1.3  Score=32.19  Aligned_cols=93  Identities=16%  Similarity=0.105  Sum_probs=59.1

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCC---eEEEEEeCCCcccchhhhhhccCccCceEEEEcc-------------------
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGH---MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKAD-------------------   60 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D-------------------   60 (305)
                      +|.|+| -|.-|..++..|.+.+.   +.++++-+.+......         ....+..++                   
T Consensus         3 ~IkViG-vGGaG~n~v~~~~~~~~~~v~~iainTD~~~L~~~~---------~~~ki~iG~~~~~g~G~gg~p~~g~~aa   72 (198)
T d1ofua1           3 VIKVIG-VGGGGGNAVNHMAKNNVEGVEFICANTDAQALKNIA---------ARTVLQLGPGVTKGLGAGANPEVGRQAA   72 (198)
T ss_dssp             CEEEEE-EHHHHHHHHHHHHHTTCCSEEEEEEESBTGGGSSCS---------CSEEEECCHHHHTTBCCCSCHHHHHHHH
T ss_pred             eEEEEE-ECchHHHHHHHHHHcCCCCeEEEEEeCcHHHHhcCC---------ccceeccccccccCCCCCCChHHHHHHH
Confidence            478888 59999999999999874   5566655443222110         011111111                   


Q ss_pred             CCCcchHHHHhcCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCcc
Q 039049           61 LLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVK  118 (305)
Q Consensus        61 ~~d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  118 (305)
                      ..+.+.+.+.+++.|.||-+||.....            -.-++-.+.+.|++. ++.
T Consensus        73 ~e~~~~I~~~l~~~d~vfi~AGlGGGT------------GtgaapviA~~ake~-g~l  117 (198)
T d1ofua1          73 LEDRERISEVLEGADMVFITTGMGGGT------------GTGAAPIIAEVAKEM-GIL  117 (198)
T ss_dssp             HHTHHHHHHHHTTCSEEEEEEETTSSH------------HHHHHHHHHHHHHHT-TCE
T ss_pred             HHHHHHHHHHhCCCCeEEEEecCCCCc------------cccHHHHHHHHHHHc-CCC
Confidence            124556788889999999999998732            233455678888887 753

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=85.72  E-value=0.39  Score=38.04  Aligned_cols=34  Identities=24%  Similarity=0.322  Sum_probs=23.5

Q ss_pred             CcEEEeCC-cc-hH--HHHHHHHHHHcCCeEEEEEeCC
Q 039049            2 PEYCVTGG-TG-FI--AAHLVKALLDKGHMVRTTVRDP   35 (305)
Q Consensus         2 ~~ilItG~-~G-~i--G~~l~~~l~~~g~~V~~~~r~~   35 (305)
                      |||+|++| || =+  +.+|+++|.++||+|..++...
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~~   38 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTAD   38 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeCC
Confidence            67888774 33 11  2248889999999999887543

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=85.34  E-value=1.5  Score=32.76  Aligned_cols=32  Identities=16%  Similarity=0.163  Sum_probs=27.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHH-cCCeEEEEEeC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLD-KGHMVRTTVRD   34 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~-~g~~V~~~~r~   34 (305)
                      ++|+|-| .|-+|+++++.|.+ .|.+|++++-+
T Consensus        32 ~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vsd~   64 (234)
T d1b26a1          32 ATVAVQG-FGNVGQFAALLISQELGSKVVAVSDS   64 (234)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEEET
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHhcCCceEEeecC
Confidence            6788888 69999999999975 59999988743

>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.12  E-value=0.38  Score=35.38  Aligned_cols=81  Identities=15%  Similarity=0.158  Sum_probs=49.5

Q ss_pred             cEEEeCCcchHHHHHHH----HHHHc-----CCeEEEEEeCCCcccchhhhhh------------ccCccCceEEEEccC
Q 039049            3 EYCVTGGTGFIAAHLVK----ALLDK-----GHMVRTTVRDPEDLSKVGFLWE------------LNGAEERLKIMKADL   61 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~----~l~~~-----g~~V~~~~r~~~~~~~~~~~~~------------~~~~~~~~~~~~~D~   61 (305)
                      +++|+||||=+.+.-.-    .|...     +..|++++|++-+.+.......            ......++.++.+|+
T Consensus        22 t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s~e~fr~~~~~~~~~~~~~~~~~~~f~~~~~Y~~~d~  101 (203)
T d1qkia1          22 IFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVAGQY  101 (203)
T ss_dssp             EEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCSCHHHHHHHSCCTTCCGGGHHHHHHHHTTEECCBCCT
T ss_pred             EEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHhhccccCcC
Confidence            58999999988764221    22333     3579999998754332211100            000124788999999


Q ss_pred             CCcchHHHHhc---------CCCEEEEeccc
Q 039049           62 LMEGSFDEAIQ---------GVDGVFHTASP   83 (305)
Q Consensus        62 ~d~~~~~~~~~---------~~d~Vi~~a~~   83 (305)
                      .|++.+.++-+         +...|+++|-+
T Consensus       102 ~~~~~~~~L~~~l~~~~~~~~~~rifYLAvp  132 (203)
T d1qkia1         102 DDAASYQRLNSHMNALHLGSQANRLFYLALP  132 (203)
T ss_dssp             TCHHHHHHHHHHHHHTTTTTTSEEEEEECSC
T ss_pred             CChhhHHHHHHHHHHHhcCCCcceEEEEecC
Confidence            99887766532         23578888755

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=84.77  E-value=1  Score=31.66  Aligned_cols=34  Identities=21%  Similarity=0.200  Sum_probs=22.4

Q ss_pred             CcEEEeCCcchHHHH-HHHHHHHcC-CeEEEEEeCCC
Q 039049            2 PEYCVTGGTGFIAAH-LVKALLDKG-HMVRTTVRDPE   36 (305)
Q Consensus         2 ~~ilItG~~G~iG~~-l~~~l~~~g-~~V~~~~r~~~   36 (305)
                      +||.|+|. |.+|+. ....|.+.+ .++.+.+++++
T Consensus         2 irvgiiG~-G~~~~~~~~~~l~~~~~~~~~~~d~~~~   37 (167)
T d1xeaa1           2 LKIAMIGL-GDIAQKAYLPVLAQWPDIELVLCTRNPK   37 (167)
T ss_dssp             EEEEEECC-CHHHHHTHHHHHTTSTTEEEEEECSCHH
T ss_pred             eEEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEECCHH
Confidence            68999995 888865 556665553 46665555443

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=84.67  E-value=0.3  Score=37.51  Aligned_cols=36  Identities=25%  Similarity=0.372  Sum_probs=29.1

Q ss_pred             CCcEEEeCCcchHH-----HHHHHHHHHcCCeEEEEEeCCCc
Q 039049            1 MPEYCVTGGTGFIA-----AHLVKALLDKGHMVRTTVRDPED   37 (305)
Q Consensus         1 m~~ilItG~~G~iG-----~~l~~~l~~~g~~V~~~~r~~~~   37 (305)
                      |++|.|+| -|.+|     .+|+..|++.|++|.+++-++..
T Consensus         1 mr~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q~   41 (269)
T d1cp2a_           1 MRQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPKA   41 (269)
T ss_dssp             CEEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTTS
T ss_pred             CCEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCCC
Confidence            88999997 55555     56677999999999999998753

>d1x74a1 c.123.1.1 (A:2-360) 2-methylacyl-CoA racemase Mcr {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: 2-methylacyl-CoA racemase Mcr
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=84.66  E-value=0.99  Score=36.17  Aligned_cols=70  Identities=19%  Similarity=0.044  Sum_probs=45.6

Q ss_pred             chHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcc---hHHHHhcCCCEEEEeccccc
Q 039049           11 GFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG---SFDEAIQGVDGVFHTASPVL   85 (305)
Q Consensus        11 G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~~~~~~~~~d~Vi~~a~~~~   85 (305)
                      ..-|-...+.|+..|.+|+-+-+..... ...    ....+-+-..+..|+.+++   .+.++++++|+||++-....
T Consensus        15 ~~agp~~~~~lad~GA~VikvE~p~~~~-~~~----~~~~nr~K~si~lDl~~~~g~~~~~~Lv~~aDv~i~n~~pg~   87 (359)
T d1x74a1          15 IGPGPHAAMILGDLGADVVRIDRPSSVD-GIS----RDAMLRNRRIVTADLKSDQGLELALKLIAKADVLIEGYRPGV   87 (359)
T ss_dssp             STHHHHHHHHHHHTTCEEEEEECC------CC----CCGGGCSCEEEECCTTSHHHHHHHHHHHTTCSEEEECSCTTH
T ss_pred             chHHHHHHHHHHHhCCEEEEECCCCCCC-chh----hhhhhCCCeEEEEeCcCHHHHHHHHHHHhhCCEEEecCCCCc
Confidence            4556777788888999999985532211 111    1111235678889998754   56778889999999976543

>d2vjma1 c.123.1.1 (A:2-428) Formyl-CoA transferase {Oxalobacter formigenes [TaxId: 847]}

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: Formyl-CoA transferase
species: Oxalobacter formigenes [TaxId: 847]

Probab=84.63  E-value=1.1  Score=36.81  Aligned_cols=103  Identities=11%  Similarity=-0.034  Sum_probs=61.6

Q ss_pred             chHHHHHHHHHHHcCCeEEEEEeCCCcccchhhh-h------h--ccCccCceEEEEccCCCcc---hHHHHhcCCCEEE
Q 039049           11 GFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFL-W------E--LNGAEERLKIMKADLLMEG---SFDEAIQGVDGVF   78 (305)
Q Consensus        11 G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~-~------~--~~~~~~~~~~~~~D~~d~~---~~~~~~~~~d~Vi   78 (305)
                      ..-|-...+.|++.|.+|+-+-+...... .+.. .      .  ....+-+-..+..|+.+++   .+.++++.+|+||
T Consensus        15 ~~agp~~~~~LadlGAeVIkvE~p~~gd~-~R~~~~~~~~~~s~~~~~~nr~K~si~lDL~~~~g~~~~~~Lv~~aDv~i   93 (427)
T d2vjma1          15 VQAGPACTQMMGFLGANVIKIERRGSGDM-TRGWLQDKPNVDSLYFTMFNCNKRSIELDMKTPEGKELLEQMIKKADVMV   93 (427)
T ss_dssp             TTHHHHHHHHHHHTTCEEEEEECTTTCSG-GGGSSCSSTTSCCHHHHTTCSSCEEEECCTTSHHHHHHHHHHHHHCSEEE
T ss_pred             hhHHHHHHHHHHHhCCeEEEECCCCCCCc-ccccCCCCCCCccHHHHHhCCCCeEEEEeCcCHHHHHHHHHHHHhCCeee
Confidence            44577777888899999999975421111 1100 0      0  0111235678999998865   5777888999999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeecc
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYR  132 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~  132 (305)
                      ++-.+.......=.               .+.+++. + +++||+|-+. ||..
T Consensus        94 ~n~~pg~~~rlGL~---------------~~~l~~~-N-P~LI~~sisg-fG~~  129 (427)
T d2vjma1          94 ENFGPGALDRMGFT---------------WEYIQEL-N-PRVILASVKG-YAEG  129 (427)
T ss_dssp             ECCSTTHHHHTTCC---------------HHHHHHH-C-TTCEEEEEES-SCTT
T ss_pred             ECCCcchHHHcCCC---------------chhhhhh-C-Cccceeeeec-cccc
Confidence            99665432111001               1234454 4 6799988754 6643

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=84.43  E-value=0.43  Score=37.65  Aligned_cols=32  Identities=19%  Similarity=0.188  Sum_probs=29.0

Q ss_pred             EEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCC
Q 039049            4 YCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPE   36 (305)
Q Consensus         4 ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~   36 (305)
                      |+|+|| |..|...+..|++.|.+|+++.+.+.
T Consensus        26 VvVIG~-G~aGl~aA~~la~~G~~V~llEk~~~   57 (322)
T d1d4ca2          26 VVIIGS-GGAGLAAAVSARDAGAKVILLEKEPI   57 (322)
T ss_dssp             EEEECS-SHHHHHHHHHHHTTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            899996 99999999999999999999987643

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=84.29  E-value=0.51  Score=36.04  Aligned_cols=32  Identities=22%  Similarity=0.165  Sum_probs=28.6

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRD   34 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~   34 (305)
                      ++|+|-| .|-+|+++++.|.+.|.+|++++-+
T Consensus        37 ~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD~   68 (255)
T d1bgva1          37 KTVALAG-FGNVAWGAAKKLAELGAKAVTLSGP   68 (255)
T ss_dssp             CEEEECC-SSHHHHHHHHHHHHHTCEEEEEEET
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCeEEEEecC
Confidence            6889999 6999999999999999999988653

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=84.22  E-value=0.27  Score=36.45  Aligned_cols=75  Identities=15%  Similarity=0.213  Sum_probs=50.5

Q ss_pred             CcEEEeC-CcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEe
Q 039049            2 PEYCVTG-GTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHT   80 (305)
Q Consensus         2 ~~ilItG-~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~   80 (305)
                      ++||=+| |+|..-.+|++.. ..| +|+++.-++.-........   ...+++.++.+|..++......+..+|+|+|.
T Consensus        58 ~~VLDlGcG~G~~~~~la~~v-~~g-~V~gvDis~~~i~~a~~~a---~~~~ni~~i~~d~~~~~~~~~~~~~vd~v~~~  132 (209)
T d1nt2a_          58 ERVLYLGAASGTTVSHLADIV-DEG-IIYAVEYSAKPFEKLLELV---RERNNIIPLLFDASKPWKYSGIVEKVDLIYQD  132 (209)
T ss_dssp             CEEEEETCTTSHHHHHHHHHT-TTS-EEEEECCCHHHHHHHHHHH---HHCSSEEEECSCTTCGGGTTTTCCCEEEEEEC
T ss_pred             CEEEEeCCcCCHHHHHHHHhc-cCC-eEEEEeCCHHHHHHHHHHh---hccCCceEEEeeccCccccccccceEEEEEec
Confidence            3566566 4688888887755 445 8999988765433322221   22348999999999887766666678888775


Q ss_pred             c
Q 039049           81 A   81 (305)
Q Consensus        81 a   81 (305)
                      .
T Consensus       133 ~  133 (209)
T d1nt2a_         133 I  133 (209)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=83.61  E-value=0.47  Score=34.31  Aligned_cols=33  Identities=12%  Similarity=-0.050  Sum_probs=29.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDP   35 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~   35 (305)
                      ++|+|+|| |..|..-+..|++.|.+|+++.+..
T Consensus         6 ~~VvIIGg-GpaGl~aA~~~ar~g~~v~vie~~~   38 (192)
T d1vdca1           6 TRLCIVGS-GPAAHTAAIYAARAELKPLLFEGWM   38 (192)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCCcEEEEEeec
Confidence            57999997 9999999999999999999996544

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=83.60  E-value=0.67  Score=34.70  Aligned_cols=33  Identities=27%  Similarity=0.260  Sum_probs=28.9

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDP   35 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~   35 (305)
                      ++|+|-| .|-+|+++++.|.+.|.+|++.+.+.
T Consensus        40 ~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~   72 (230)
T d1leha1          40 LAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNK   72 (230)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccH
Confidence            6788988 59999999999999999999886543

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=83.25  E-value=2.6  Score=33.01  Aligned_cols=74  Identities=18%  Similarity=0.080  Sum_probs=43.1

Q ss_pred             eCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcc-hHHHHhcCCCEEEEeccccc
Q 039049            7 TGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEG-SFDEAIQGVDGVFHTASPVL   85 (305)
Q Consensus         7 tG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~-~~~~~~~~~d~Vi~~a~~~~   85 (305)
                      .-|+|..+.+++    ..+.+|+++..++.............+ ..+++++.+|..+.. .+.+.-+.+|+||.......
T Consensus       153 ~~gtG~~s~~~a----~g~~~V~~vD~s~~al~~a~~n~~~ng-l~~~~~i~~d~~~~~~~~~~~~~~fD~Vi~DpP~~~  227 (318)
T d1wxxa2         153 FSYAGGFALHLA----LGFREVVAVDSSAEALRRAEENARLNG-LGNVRVLEANAFDLLRRLEKEGERFDLVVLDPPAFA  227 (318)
T ss_dssp             TCTTTHHHHHHH----HHEEEEEEEESCHHHHHHHHHHHHHTT-CTTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCSC
T ss_pred             CCCCcHHHHHHH----hcCCcEEeecchHHHHHHHHHHHHHcC-CCCcceeeccHHHHhhhhHhhhcCCCEEEEcCCccc
Confidence            345676665544    346789999988754333222222222 246889999886632 22222347899998765443

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=83.00  E-value=4.7  Score=27.76  Aligned_cols=65  Identities=18%  Similarity=0.167  Sum_probs=38.2

Q ss_pred             CcEEEeCCcchHHHH-HHHHHHHc-CCeEEEEE-eCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEE
Q 039049            2 PEYCVTGGTGFIAAH-LVKALLDK-GHMVRTTV-RDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVF   78 (305)
Q Consensus         2 ~~ilItG~~G~iG~~-l~~~l~~~-g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi   78 (305)
                      ++|.|+| +|.+|+. ....|... +.+++++. +++++..+..   ...    ++     +.  .+.+..+++++|+|+
T Consensus         2 iri~iIG-~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~---~~~----~~-----~~--~~~~~~l~~~~D~V~   66 (164)
T d1tlta1           2 LRIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPIC---ESW----RI-----PY--ADSLSSLAASCDAVF   66 (164)
T ss_dssp             EEEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHH---HHH----TC-----CB--CSSHHHHHTTCSEEE
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhh---hcc----cc-----cc--cccchhhhhhccccc
Confidence            5799999 5999975 56666554 56777665 4444332221   111    11     12  234566678899988


Q ss_pred             Eec
Q 039049           79 HTA   81 (305)
Q Consensus        79 ~~a   81 (305)
                      -+.
T Consensus        67 I~t   69 (164)
T d1tlta1          67 VHS   69 (164)
T ss_dssp             ECS
T ss_pred             ccc
Confidence            654

>d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class I ketol-acid reductoisomerase (KARI)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=82.81  E-value=1.8  Score=30.66  Aligned_cols=65  Identities=18%  Similarity=0.141  Sum_probs=48.1

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      |+|.|+| -|-.|++=+.-|...|.+|++-.|...+.-+...       .++++        .-.+.++.+..|+|..+.
T Consensus        17 k~IaViG-YGsQG~AhAlNLrDSG~~V~VGLr~gs~s~~~A~-------~~Gf~--------v~~~~eA~~~aDiim~L~   80 (182)
T d1np3a2          17 KKVAIIG-YGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAE-------AHGLK--------VADVKTAVAAADVVMILT   80 (182)
T ss_dssp             SCEEEEC-CSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHH-------HTTCE--------EECHHHHHHTCSEEEECS
T ss_pred             CEEEEEe-eCcHhHHHHhhhhhcCCCEEEEcCCCCccHHHHh-------hhccc--------cccHHHHhhhcCeeeeec
Confidence            7899999 7999999999999999999998887653211111       11233        345778888999999886


Q ss_pred             c
Q 039049           82 S   82 (305)
Q Consensus        82 ~   82 (305)
                      .
T Consensus        81 P   81 (182)
T d1np3a2          81 P   81 (182)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1ps9a2 c.3.1.1 (A:466-627) 2,4-dienoyl-CoA reductase, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=82.75  E-value=0.28  Score=34.45  Aligned_cols=26  Identities=19%  Similarity=0.179  Sum_probs=23.4

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeE
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMV   28 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V   28 (305)
                      ++++|+|| |++|..++..++..|.++
T Consensus        30 krVvVIGg-G~~g~d~a~~~~r~G~~~   55 (162)
T d1ps9a2          30 NKVAIIGC-GGIGFDTAMYLSQPGEST   55 (162)
T ss_dssp             SEEEEECC-HHHHHHHHHHHTCCSSCG
T ss_pred             CceEEEcC-chhHHHHHHHHHHcCCcc
Confidence            68999997 999999999999998654

>d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=82.71  E-value=5.3  Score=28.78  Aligned_cols=95  Identities=22%  Similarity=0.183  Sum_probs=58.8

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCC---eEEEEEeCCCcccchhhhhhccCccCceEEEEc-----------c--------
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGH---MVRTTVRDPEDLSKVGFLWELNGAEERLKIMKA-----------D--------   60 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-----------D--------   60 (305)
                      +|-|+| -|.-|..++.+|.+.+.   +.++++-+....      ....   .......+           |        
T Consensus         3 ~IkViG-vGGaG~n~vn~~~~~~~~~v~~iainTD~~~L------~~~~---~~~ki~iG~~~t~G~Gagg~p~~g~~aa   72 (198)
T d1rq2a1           3 VIKVVG-IGGGGVNAVNRMIEQGLKGVEFIAINTDAQAL------LMSD---ADVKLDVGRDSTRGLGAGADPEVGRKAA   72 (198)
T ss_dssp             CEEEEE-EHHHHHHHHHHHHHTTCCSEEEEEEESCHHHH------HHCC---CSEEEECCTTTC-----CCCHHHHHHHH
T ss_pred             eEEEEE-eCchHHHHHHHHHHcCCCCceEEEEcchHHHH------hcCC---cchhhccccccccCCCcCcChhhhHhhH
Confidence            467788 48889999999999874   445554332211      1111   11122222           1        


Q ss_pred             CCCcchHHHHhcCCCEEEEeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEE
Q 039049           61 LLMEGSFDEAIQGVDGVFHTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRV  120 (305)
Q Consensus        61 ~~d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~  120 (305)
                      ..+.+.+.+++++.|.||-+||.....            -.-++-.+.+.|++. ++-.+
T Consensus        73 ~e~~~~I~~~l~~~d~vfi~AGlGGgT------------GtGaaPviA~iake~-g~l~v  119 (198)
T d1rq2a1          73 EDAKDEIEELLRGADMVFVTAGEGGGT------------GTGGAPVVASIARKL-GALTV  119 (198)
T ss_dssp             HHTHHHHHHHHTTCSEEEEEEETTSSH------------HHHHHHHHHHHHHHH-TCEEE
T ss_pred             HHHHHHHHHHhcCCCEEEEEEecCCCC------------CcchHHHHHHHHHHc-CCcEE
Confidence            134567888888999999999997732            234466677888887 75433

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=82.56  E-value=0.66  Score=32.96  Aligned_cols=30  Identities=17%  Similarity=0.029  Sum_probs=27.4

Q ss_pred             EEEeCCcchHHHHHHHHHHHcCCeEEEEEeC
Q 039049            4 YCVTGGTGFIAAHLVKALLDKGHMVRTTVRD   34 (305)
Q Consensus         4 ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~   34 (305)
                      |+|+|| |..|..-+..+.+.|.+|.++.++
T Consensus         4 ViIIGg-GpaGl~AAi~aar~G~~v~iie~~   33 (184)
T d1fl2a1           4 VLIVGS-GPAGAAAAIYSARKGIRTGLMGER   33 (184)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCeEEEEEEe
Confidence            789997 999999999999999999999764

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=82.47  E-value=0.47  Score=35.32  Aligned_cols=33  Identities=21%  Similarity=0.145  Sum_probs=28.8

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCC-------eEEEEEeCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGH-------MVRTTVRDP   35 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~-------~V~~~~r~~   35 (305)
                      .+|+|+|| |.-|...+.+|++.||       +|+++-+.+
T Consensus         3 ~~VaVIGa-GpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~   42 (239)
T d1lqta2           3 YYIAIVGS-GPSAFFAAASLLKAADTTEDLDMAVDMLEMLP   42 (239)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEEEEESSS
T ss_pred             cEEEEECc-CHHHHHHHHHHHHcCCccccCCCceEEEecCC
Confidence            37999996 9999999999999884       799998765

>d1q7ea_ c.123.1.1 (A:) Hypothetical protein YfdW {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: Hypothetical protein YfdW
species: Escherichia coli [TaxId: 562]

Probab=82.45  E-value=2.3  Score=34.72  Aligned_cols=103  Identities=9%  Similarity=-0.046  Sum_probs=59.4

Q ss_pred             chHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhh---------hccCccCceEEEEccCCCcc---hHHHHhcCCCEEE
Q 039049           11 GFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLW---------ELNGAEERLKIMKADLLMEG---SFDEAIQGVDGVF   78 (305)
Q Consensus        11 G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~---------~~~~~~~~~~~~~~D~~d~~---~~~~~~~~~d~Vi   78 (305)
                      ..-|-...+.|++.|.+|+-+-+..... ..+...         .....+-+-..+..|+.+++   .+.++++++|+||
T Consensus        16 ~~agp~~~~~Lad~GAeVIkvE~p~~gd-~~R~~~~~~~~~~s~~~~~~nr~K~si~lDL~~~~g~~~~~~Li~~aDv~i   94 (417)
T d1q7ea_          16 VQSGPSCTQMLAWFGADVIKIERPGVGD-VTRHQLRDIPDIDALYFTMLNSNKRSIELNTKTAEGKEVMEKLIREADILV   94 (417)
T ss_dssp             TTHHHHHHHHHHHTTCEEEEEECTTTCC-GGGTTTCSSTTSCCHHHHTTCTTCEEEECCTTSHHHHHHHHHHHHHCSEEE
T ss_pred             hhHHHHHHHHHHHhCCeEEEECCCCCCC-chhccCCCCCCCccHHHHHhCCCCeEEEEeCcCHHHHHHHHHHHhcCcccE
Confidence            4456677778888999999997532111 101000         01112335678999998865   4667888999999


Q ss_pred             EeccccccCCCCchhhhhhhhhHHHHHHHHHHHHhcCCccEEEEeccceeeecc
Q 039049           79 HTASPVLVPYDNNIQATLIDPCIKGTLNVLSSCKKAKSVKRVVLTSSCSSIRYR  132 (305)
Q Consensus        79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~  132 (305)
                      ++--........=.               .+.+++. + +++||+|-+. ||..
T Consensus        95 ~n~~pg~~~rlGl~---------------~~~l~~~-n-P~lI~~sisg-fG~~  130 (417)
T d1q7ea_          95 ENFHPGAIDHMGFT---------------WEHIQEI-N-PRLIFGSIKG-FDEC  130 (417)
T ss_dssp             ECCCC-------CC---------------HHHHHHH-C-TTCEEEEEES-SCTT
T ss_pred             eccCCCcHhhcCCC---------------HHHHHhh-C-CCEEEEeeec-cccc
Confidence            99766542211111               1234444 4 6799988755 6643

>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain
species: Fungus (Phanerochaete chrysosporium) [TaxId: 5306]

Probab=82.39  E-value=0.62  Score=37.47  Aligned_cols=31  Identities=23%  Similarity=0.232  Sum_probs=27.8

Q ss_pred             EEEeCCcchHHHHHHHHHHHcCCeEEEEEeCC
Q 039049            4 YCVTGGTGFIAAHLVKALLDKGHMVRTTVRDP   35 (305)
Q Consensus         4 ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~   35 (305)
                      ++|+|+ |.-|.-++.+|++.|.+|.++=+..
T Consensus         5 ~IIVGs-G~aG~v~A~rLae~g~~VlvLEaG~   35 (360)
T d1kdga1           5 YIIVGA-GPGGIIAADRLSEAGKKVLLLERGG   35 (360)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHhhCCCeEEEEEccC
Confidence            688895 9999999999999999999997764

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=82.21  E-value=0.56  Score=34.38  Aligned_cols=30  Identities=23%  Similarity=0.202  Sum_probs=23.8

Q ss_pred             CcEEEeCCcch-----HHHHHHHHHHHcCCeEEEE
Q 039049            2 PEYCVTGGTGF-----IAAHLVKALLDKGHMVRTT   31 (305)
Q Consensus         2 ~~ilItG~~G~-----iG~~l~~~l~~~g~~V~~~   31 (305)
                      |+++|+|-...     +-..|+..|+++|++|..+
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~i   36 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGY   36 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEE
Confidence            68999985324     4457888999999999998

>d1h9aa1 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate dehydrogenase, N-terminal domain {Leuconostoc mesenteroides [TaxId: 1245]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Leuconostoc mesenteroides [TaxId: 1245]

Probab=81.95  E-value=2.6  Score=30.42  Aligned_cols=80  Identities=15%  Similarity=0.145  Sum_probs=47.2

Q ss_pred             EEEeCCcchHHHH-----HHHHHHHc----CCeEEEEEeCCCcccchhhh-----hhc-------cCccCceEEEEccCC
Q 039049            4 YCVTGGTGFIAAH-----LVKALLDK----GHMVRTTVRDPEDLSKVGFL-----WEL-------NGAEERLKIMKADLL   62 (305)
Q Consensus         4 ilItG~~G~iG~~-----l~~~l~~~----g~~V~~~~r~~~~~~~~~~~-----~~~-------~~~~~~~~~~~~D~~   62 (305)
                      ++|+||||=+.+-     |-+...+.    +..|++++|+.-+.+.....     ...       .....++.++++|+.
T Consensus         8 lVIFGaTGDLa~RKL~PAL~~L~~~g~lp~~~~Iig~aR~~~~~e~f~~~v~~~l~~~~~~~~~~~~~~~~~~y~~~~~~   87 (195)
T d1h9aa1           8 VTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALNDDEFKQLVRDSIKDFTDDQAQAEAFIEHFSYRAHDVT   87 (195)
T ss_dssp             EEEETTTSHHHHHTHHHHHHHHHHTTSSCSSEEEEEEESSCCCHHHHHHHHHHHHGGGCSCHHHHHHHHTTEEEEECCTT
T ss_pred             EEEECcccHHHHhHHHHHHHHHHHcCCCCCCCEEEEEECCcCcHHHHHHHHHHHHhhccchHhhHHHHhhccceeeEeec
Confidence            4478999998874     33322221    35799999987654432211     110       111247889999998


Q ss_pred             CcchHHHHhc-----------CCCEEEEeccc
Q 039049           63 MEGSFDEAIQ-----------GVDGVFHTASP   83 (305)
Q Consensus        63 d~~~~~~~~~-----------~~d~Vi~~a~~   83 (305)
                      +++.+.++.+           +...|+.+|-+
T Consensus        88 ~~~~~~~l~~~l~~~~~~~~~~~~rifYLAvp  119 (195)
T d1h9aa1          88 DAASYAVLKEAIEEAADKFDIDGNRIFYMSVA  119 (195)
T ss_dssp             CTTTHHHHHHHHHHHHHHHTCCSCEEEEECSC
T ss_pred             cHhhHHHHHHHHHHHHhhcCCCcceEEEEecC
Confidence            8765554321           23578888754

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=81.94  E-value=0.65  Score=34.22  Aligned_cols=31  Identities=13%  Similarity=-0.053  Sum_probs=28.1

Q ss_pred             cEEEeCCcchHHHHHHHHHHHcCCeEEEEEeC
Q 039049            3 EYCVTGGTGFIAAHLVKALLDKGHMVRTTVRD   34 (305)
Q Consensus         3 ~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~   34 (305)
                      .++|+|| |..|...+..+++.|.+|.++-++
T Consensus         7 DlvVIG~-GpaGl~aA~~aa~~G~~V~liE~~   37 (220)
T d1lvla1           7 TLLIIGG-GPGGYVAAIRAGQLGIPTVLVEGQ   37 (220)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCcEEEEecC
Confidence            4899996 999999999999999999999654

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=81.88  E-value=0.58  Score=33.65  Aligned_cols=33  Identities=6%  Similarity=-0.117  Sum_probs=29.2

Q ss_pred             CcEEEeCCcchHHHHHHHHHHHcCCeEEEEEeCC
Q 039049            2 PEYCVTGGTGFIAAHLVKALLDKGHMVRTTVRDP   35 (305)
Q Consensus         2 ~~ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~   35 (305)
                      ++|+|+|| |..|..-+..+++.|.+|+++.|..
T Consensus         6 ~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~~   38 (190)
T d1trba1           6 SKLLILGS-GPAGYTAAVYAARANLQPVLITGME   38 (190)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTTTCCCEEECCSS
T ss_pred             CcEEEECC-CHHHHHHHHHHHHcCCceEEEEeec
Confidence            46999997 9999999999999999999997654

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=81.78  E-value=0.92  Score=33.46  Aligned_cols=31  Identities=13%  Similarity=0.086  Sum_probs=28.4

Q ss_pred             EEEeCCcchHHHHHHHHHHHcCCeEEEEEeCC
Q 039049            4 YCVTGGTGFIAAHLVKALLDKGHMVRTTVRDP   35 (305)
Q Consensus         4 ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~   35 (305)
                      |+|+|| |..|...+.++++.|.+|.++.+.+
T Consensus         8 viVIG~-GpAGl~aA~~aa~~G~kV~lie~~~   38 (233)
T d1v59a1           8 VVIIGG-GPAGYVAAIKAAQLGFNTACVEKRG   38 (233)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence            899997 9999999999999999999998654

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.42  E-value=0.95  Score=33.17  Aligned_cols=31  Identities=19%  Similarity=0.214  Sum_probs=27.9

Q ss_pred             EEEeCCcchHHHHHHHHHHHcCCeEEEEEeCC
Q 039049            4 YCVTGGTGFIAAHLVKALLDKGHMVRTTVRDP   35 (305)
Q Consensus         4 ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~   35 (305)
                      ++|+|| |..|...+..+++.|.+|.++.+..
T Consensus         6 viIIG~-GpaG~~aA~~aar~G~kV~vIEk~~   36 (221)
T d3grsa1           6 YLVIGG-GSGGLASARRAAELGARAAVVESHK   36 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEeccC
Confidence            789997 9999999999999999999997643

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=81.39  E-value=0.63  Score=36.60  Aligned_cols=31  Identities=23%  Similarity=0.170  Sum_probs=28.5

Q ss_pred             EEEeCCcchHHHHHHHHHHHcCCeEEEEEeCC
Q 039049            4 YCVTGGTGFIAAHLVKALLDKGHMVRTTVRDP   35 (305)
Q Consensus         4 ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~   35 (305)
                      |+|+|| |..|...+..+++.|.+|+++.+.+
T Consensus        22 VvVIGa-G~aGl~AA~~aa~~G~~V~vlEK~~   52 (317)
T d1qo8a2          22 VLVVGA-GSAGFNASLAAKKAGANVILVDKAP   52 (317)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            899996 9999999999999999999997764

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=80.25  E-value=0.9  Score=32.58  Aligned_cols=66  Identities=21%  Similarity=0.237  Sum_probs=39.8

Q ss_pred             CcchHHHHHHHHHHHcCCeEEEEEeCCCcccchhhhhhccCccCceEEEEccCCCcchHHHHhcCCCEEEEec
Q 039049            9 GTGFIAAHLVKALLDKGHMVRTTVRDPEDLSKVGFLWELNGAEERLKIMKADLLMEGSFDEAIQGVDGVFHTA   81 (305)
Q Consensus         9 ~~G~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~Vi~~a   81 (305)
                      |+|.++.++    ++.+.+|+++..++........-....+..++++++++|..+   ...-...+|.|+-..
T Consensus        43 GsG~~s~~l----A~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~---~~~~~~~~D~v~~~~  108 (186)
T d1l3ia_          43 GTGGVTLEL----AGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE---ALCKIPDIDIAVVGG  108 (186)
T ss_dssp             TTSHHHHHH----HTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH---HHTTSCCEEEEEESC
T ss_pred             CeEcccccc----cccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchhh---cccccCCcCEEEEeC
Confidence            467776554    445679999998876443332222223334589999998643   222234789888553

>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Fumarate reductase
species: Wolinella succinogenes [TaxId: 844]

Probab=80.10  E-value=0.79  Score=36.15  Aligned_cols=31  Identities=26%  Similarity=0.231  Sum_probs=28.2

Q ss_pred             EEEeCCcchHHHHHHHHHHHcCCeEEEEEeCC
Q 039049            4 YCVTGGTGFIAAHLVKALLDKGHMVRTTVRDP   35 (305)
Q Consensus         4 ilItG~~G~iG~~l~~~l~~~g~~V~~~~r~~   35 (305)
                      |+|+|| |..|..-+-++++.|.+|+++.+.+
T Consensus         8 VvVIG~-G~AGl~AAl~aa~~G~~V~liEK~~   38 (336)
T d2bs2a2           8 SLVIGG-GLAGLRAAVATQQKGLSTIVLSLIP   38 (336)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEecCC
Confidence            899996 9999999999999999999997654