Citrus Sinensis ID: 039060
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1040 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SWW6 | 1026 | Cellulose synthase A cata | yes | no | 0.983 | 0.997 | 0.866 | 0.0 | |
| Q69P51 | 1055 | Cellulose synthase A cata | yes | no | 0.998 | 0.983 | 0.824 | 0.0 | |
| A2Z1C8 | 1055 | Cellulose synthase A cata | N/A | no | 0.998 | 0.983 | 0.824 | 0.0 | |
| Q84ZN6 | 1081 | Probable cellulose syntha | no | no | 0.971 | 0.934 | 0.688 | 0.0 | |
| Q69V23 | 1093 | Probable cellulose syntha | no | no | 0.994 | 0.946 | 0.671 | 0.0 | |
| Q941L0 | 1065 | Cellulose synthase A cata | no | no | 0.967 | 0.944 | 0.687 | 0.0 | |
| Q84M43 | 1073 | Probable cellulose syntha | no | no | 0.960 | 0.931 | 0.686 | 0.0 | |
| A2XN66 | 1073 | Probable cellulose syntha | N/A | no | 0.960 | 0.931 | 0.686 | 0.0 | |
| Q851L8 | 1092 | Probable cellulose syntha | no | no | 0.997 | 0.949 | 0.678 | 0.0 | |
| A2XNT2 | 1092 | Probable cellulose syntha | N/A | no | 0.997 | 0.949 | 0.678 | 0.0 |
| >sp|Q9SWW6|CESA7_ARATH Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1 | Back alignment and function desciption |
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Score = 1848 bits (4786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 904/1043 (86%), Positives = 969/1043 (92%), Gaps = 20/1043 (1%)
Query: 1 MEASAGLVAGSHNRNELVVIHNHEEPKPLKNLDAQVCEICGDEIGLTVDGDLFVACNECG 60
MEASAGLVAGSHNRNELVVIHNHEEPKPLKNLD Q CEICGD+IGLTV+GDLFVACNECG
Sbjct: 1 MEASAGLVAGSHNRNELVVIHNHEEPKPLKNLDGQFCEICGDQIGLTVEGDLFVACNECG 60
Query: 61 FPVCRPCYEYERREGTQVCPQCKTRYKRLKGSPRVEGDEDEEDIDDIEHEFNIEDEKNKE 120
FP CRPCYEYERREGTQ CPQCKTRYKRL+GSPRVEGDEDEEDIDDIE+EFNIE E++K
Sbjct: 61 FPACRPCYEYERREGTQNCPQCKTRYKRLRGSPRVEGDEDEEDIDDIEYEFNIEHEQDKH 120
Query: 121 KHVAD-MLHGKMSYGRGPDSDENSQFPPVIAGGRSRPVSGEFPVGGYGHGDQMLSSSLHK 179
KH A+ ML+GKMSYGRGP+ DEN +FPPVIAGG S GEFPVG G LHK
Sbjct: 121 KHSAEAMLYGKMSYGRGPEDDENGRFPPVIAGGHS----GEFPVG---GGYGNGEHGLHK 173
Query: 180 RVHPYPVSEPGSARWDERKEGGWKDRMDDWKMQQGNLGPETDDANDPDMAMVDEARQPLS 239
RVHPYP SE GS EGGW++RMDDWK+Q GNLGPE DD DP+M ++DEARQPLS
Sbjct: 174 RVHPYPSSEAGS-------EGGWRERMDDWKLQHGNLGPEPDD--DPEMGLIDEARQPLS 224
Query: 240 RKVPIASSKINPYRMVIVARLVILAFFFRYRILNPVHDAIGLWLISVICEIWFAISWILD 299
RKVPIASSKINPYRMVIVARLVILA F RYR+LNPVHDA+GLWL SVICEIWFA+SWILD
Sbjct: 225 RKVPIASSKINPYRMVIVARLVILAVFLRYRLLNPVHDALGLWLTSVICEIWFAVSWILD 284
Query: 300 QFPKWFPIDRETYLDRLSFRYEREGEPNMLAPVDIFVSTVDPLKEPPLVTANTVLSILAM 359
QFPKWFPI+RETYLDRLS RYEREGEPNMLAPVD+FVSTVDPLKEPPLVT+NTVLSILAM
Sbjct: 285 QFPKWFPIERETYLDRLSLRYEREGEPNMLAPVDVFVSTVDPLKEPPLVTSNTVLSILAM 344
Query: 360 DYPVDKISCYISDDGASIITFDALAETAEFARKWVPFCKKFAIEPRAPEMYFTLKVDYLK 419
DYPV+KISCY+SDDGAS++TF++L+ETAEFARKWVPFCKKF+IEPRAPEMYFTLKVDYL+
Sbjct: 345 DYPVEKISCYVSDDGASMLTFESLSETAEFARKWVPFCKKFSIEPRAPEMYFTLKVDYLQ 404
Query: 420 DKVQPTFVKERRAMKREYEEFKVRINAIVARASKIPPEGWIMPDGTPWPGNNTRDHPGMI 479
DKV PTFVKERRAMKREYEEFKVRINA VA+ASK+P EGWIM DGTPWPGNNT+DHPGMI
Sbjct: 405 DKVHPTFVKERRAMKREYEEFKVRINAQVAKASKVPLEGWIMQDGTPWPGNNTKDHPGMI 464
Query: 480 QVFLGQSGGHDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSGVLTNAPFMLNLD 539
QVFLG SGG D EG+ELPRLVYVSREKRPGFQHHKKAGAMNALVRV+GVLTNAPFMLNLD
Sbjct: 465 QVFLGHSGGFDVEGHELPRLVYVSREKRPGFQHHKKAGAMNALVRVAGVLTNAPFMLNLD 524
Query: 540 CDHYVNNSKAVRESMCFLMDPQTGRKVCYVQFPQRFDGIDRHDRYANRNTVFFDINMRGL 599
CDHYVNNSKAVRE+MCFLMDPQ G+KVCYVQFPQRFDGID +DRYANRNTVFFDINM+GL
Sbjct: 525 CDHYVNNSKAVREAMCFLMDPQIGKKVCYVQFPQRFDGIDTNDRYANRNTVFFDINMKGL 584
Query: 600 DGIQGPVYVGTGCVFRRQALYGYEPPKGPKRPKMVSCDCCPCFGRRK--KKYSKHSANGE 657
DGIQGPVYVGTGCVF+RQALYGYEPPKGPKRPKM+SC CCPCFGRR+ KK+SK+ NG+
Sbjct: 585 DGIQGPVYVGTGCVFKRQALYGYEPPKGPKRPKMISCGCCPCFGRRRKNKKFSKNDMNGD 644
Query: 658 NANLGGMDDDKELLMSQMNFEKKFGQSAIFVTSTLMEQGGVPPSSSPASLLKEAIHVISC 717
A LGG + DKE LMS+MNFEK FGQS+IFVTSTLME+GGVPPSSSPA LLKEAIHVISC
Sbjct: 645 VAALGGAEGDKEHLMSEMNFEKTFGQSSIFVTSTLMEEGGVPPSSSPAVLLKEAIHVISC 704
Query: 718 GYEDKTEWGLELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRAAFKGSAPINLSDRLNQ 777
GYEDKTEWG ELGWIYGSITEDILTGFKMHCRGWRSIYCMPKR AFKGSAPINLSDRLNQ
Sbjct: 705 GYEDKTEWGTELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRPAFKGSAPINLSDRLNQ 764
Query: 778 VLRWALGSVEIFFSRHSPVWYGYKGGNLRFLERFAYVNTTIYPFTSIPLLAYCVLPAICL 837
VLRWALGSVEIFFSRHSP+WYGYKGG L++LERFAY NTTIYPFTSIPLLAYC+LPAICL
Sbjct: 765 VLRWALGSVEIFFSRHSPLWYGYKGGKLKWLERFAYANTTIYPFTSIPLLAYCILPAICL 824
Query: 838 LTDKFIMPEISTFASLFFIALFISIFTTGILELRWSGVSIEEWWRNEQFWVIGGISAHLF 897
LTDKFIMP ISTFASLFFI+LF+SI TGILELRWSGVSIEEWWRNEQFWVIGGISAHLF
Sbjct: 825 LTDKFIMPPISTFASLFFISLFMSIIVTGILELRWSGVSIEEWWRNEQFWVIGGISAHLF 884
Query: 898 AVVQGLLKILAGIDTNFTVTSKATDEDEEFGELYSFKWTTLLIPPTTVLIINLVGVVAGI 957
AVVQGLLKILAGIDTNFTVTSKATD D++FGELY+FKWTTLLIPPTTVLIIN+VGVVAGI
Sbjct: 885 AVVQGLLKILAGIDTNFTVTSKATD-DDDFGELYAFKWTTLLIPPTTVLIINIVGVVAGI 943
Query: 958 SDAINNGYQSWGPLFGKLFFAFWVILHLYPFLKGLMGRQNRTPTIVVIWSILLASIFSLL 1017
SDAINNGYQSWGPLFGKLFF+FWVI+HLYPFLKGLMGRQNRTPTIVVIWS+LLASIFSLL
Sbjct: 944 SDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLL 1003
Query: 1018 WVRIDPFVMKTKGPATTKCGINC 1040
WVRIDPFV+KTKGP T+KCGINC
Sbjct: 1004 WVRIDPFVLKTKGPDTSKCGINC 1026
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Catalytic subunit of cellulose synthase terminal complexes ('rosettes'), required for beta-1,4-glucan microfibril crystallization, a major mechanism of the cell wall formation. Involved in the secondary cell wall formation. Required for the xylem cell wall thickening. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 2 |
| >sp|Q69P51|CESA9_ORYSJ Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1 | Back alignment and function description |
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| >sp|A2Z1C8|CESA9_ORYSI Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q84ZN6|CESA8_ORYSJ Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA8 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q69V23|CESA3_ORYSJ Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA3 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q941L0|CESA3_ARATH Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana GN=CESA3 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q84M43|CESA2_ORYSJ Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA2 PE=2 SV=1 | Back alignment and function description |
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| >sp|A2XN66|CESA2_ORYSI Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA2 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q851L8|CESA5_ORYSJ Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA5 PE=2 SV=1 | Back alignment and function description |
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| >sp|A2XNT2|CESA5_ORYSI Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA5 PE=2 SV=1 | Back alignment and function description |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1040 | ||||||
| TAIR|locus:2178935 | 1026 | IRX3 "IRREGULAR XYLEM 3" [Arab | 0.982 | 0.996 | 0.823 | 0.0 | |
| TAIR|locus:2124167 | 985 | IRX1 "IRREGULAR XYLEM 1" [Arab | 0.813 | 0.858 | 0.675 | 0.0 | |
| TAIR|locus:2178193 | 1069 | CESA5 "cellulose synthase 5" [ | 0.620 | 0.603 | 0.616 | 0.0 | |
| TAIR|locus:2040080 | 1065 | CESA10 "cellulose synthase 10" | 0.624 | 0.609 | 0.569 | 0.0 | |
| TAIR|locus:2136308 | 1084 | CESA2 "cellulose synthase A2" | 0.439 | 0.421 | 0.729 | 0.0 | |
| TAIR|locus:2176090 | 1084 | CESA6 "cellulose synthase 6" [ | 0.487 | 0.467 | 0.664 | 0.0 | |
| TAIR|locus:2172457 | 1049 | CESA4 "cellulose synthase A4" | 0.444 | 0.440 | 0.730 | 0.0 | |
| TAIR|locus:2156789 | 1065 | CEV1 "CONSTITUTIVE EXPRESSION | 0.443 | 0.432 | 0.728 | 0.0 | |
| TAIR|locus:2052576 | 1088 | CESA9 "cellulose synthase A9" | 0.435 | 0.416 | 0.713 | 0.0 | |
| TAIR|locus:2127776 | 1081 | CESA1 "cellulose synthase 1" [ | 0.460 | 0.443 | 0.669 | 0.0 |
| TAIR|locus:2178935 IRX3 "IRREGULAR XYLEM 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 4632 (1635.6 bits), Expect = 0., P = 0.
Identities = 860/1044 (82%), Positives = 923/1044 (88%)
Query: 1 MEASAGLVAGSHNRNELVVIHNHEEPKPLKNLDAQVCEICGDEIGLTVDGDLFVACNECG 60
MEASAGLVAGSHNRNELVVIHNHEEPKPLKNLD Q CEICGD+IGLTV+GDLFVACNECG
Sbjct: 1 MEASAGLVAGSHNRNELVVIHNHEEPKPLKNLDGQFCEICGDQIGLTVEGDLFVACNECG 60
Query: 61 FPVCRPCYEYERREGTQVCPQCKTRYKRLKGSPRVXXXXXXXXXXXXXXXXXXXXXKNKE 120
FP CRPCYEYERREGTQ CPQCKTRYKRL+GSPRV ++K
Sbjct: 61 FPACRPCYEYERREGTQNCPQCKTRYKRLRGSPRVEGDEDEEDIDDIEYEFNIEHEQDKH 120
Query: 121 KHVAD-MLHGKMSYGRGPDSDENSQFPPVIAGGRSRPVSGEFPVGG-YGHGDQMLSSSLH 178
KH A+ ML+GKMSYGRGP+ DEN +FPPVIAGG S GEFPVGG YG+G+ LH
Sbjct: 121 KHSAEAMLYGKMSYGRGPEDDENGRFPPVIAGGHS----GEFPVGGGYGNGEH----GLH 172
Query: 179 KRVHPYPVSEPGSARWDERKEGGWKDRMDDWKMQQGNLGPETDDANDPDMAMVDEARQPL 238
KRVHPYP SE GS EGGW++RMDDWK+Q GNLGPE DD DP+M ++DEARQPL
Sbjct: 173 KRVHPYPSSEAGS-------EGGWRERMDDWKLQHGNLGPEPDD--DPEMGLIDEARQPL 223
Query: 239 SRKVPIASSKINPYRMVIVARLVILAFFFRYRILNPVHDAIGLWLISVICEIWFAISWIL 298
SRKVPIASSKINPYRMVIVARLVILA F RYR+LNPVHDA+GLWL SVICEIWFA+SWIL
Sbjct: 224 SRKVPIASSKINPYRMVIVARLVILAVFLRYRLLNPVHDALGLWLTSVICEIWFAVSWIL 283
Query: 299 DQFPKWFPIDRETYLDRLSFRYEREGEPNMLAPVDIFVSTVDPLKEPPLVTANTVLSILA 358
DQFPKWFPI+RETYLDRLS RYEREGEPNMLAPVD+FVSTVDPLKEPPLVT+NTVLSILA
Sbjct: 284 DQFPKWFPIERETYLDRLSLRYEREGEPNMLAPVDVFVSTVDPLKEPPLVTSNTVLSILA 343
Query: 359 MDYPVDKISCYISDDGASIITFDALAETAEFARKWVPFCKKFAIEPRAPEMYFTLKVDYL 418
MDYPV+KISCY+SDDGAS++TF++L+ETAEFARKWVPFCKKF+IEPRAPEMYFTLKVDYL
Sbjct: 344 MDYPVEKISCYVSDDGASMLTFESLSETAEFARKWVPFCKKFSIEPRAPEMYFTLKVDYL 403
Query: 419 KDKVQPTFVKERRAMKREYEEFKVRINAIVARASKIPPEGWIMPDGTPWPGNNTRDHPGM 478
+DKV PTFVKERRAMKREYEEFKVRINA VA+ASK+P EGWIM DGTPWPGNNT+DHPGM
Sbjct: 404 QDKVHPTFVKERRAMKREYEEFKVRINAQVAKASKVPLEGWIMQDGTPWPGNNTKDHPGM 463
Query: 479 IQVFLGQSGGHDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSGVLTNAPFMLNL 538
IQVFLG SGG D EG+ELPRLVYVSREKRPGFQHHKKAGAMNALVRV+GVLTNAPFMLNL
Sbjct: 464 IQVFLGHSGGFDVEGHELPRLVYVSREKRPGFQHHKKAGAMNALVRVAGVLTNAPFMLNL 523
Query: 539 DCDHYVNNSKAVRESMCFLMDPQTGRKVCYVQFPQRFDGIDRHDRYANRNTVFFDINMRG 598
DCDHYVNNSKAVRE+MCFLMDPQ G+KVCYVQFPQRFDGID +DRYANRNTVFFDINM+G
Sbjct: 524 DCDHYVNNSKAVREAMCFLMDPQIGKKVCYVQFPQRFDGIDTNDRYANRNTVFFDINMKG 583
Query: 599 LDGIQGPVYVGTGCVFRRQALYGYEPPKGPKRPKMVSCDCCPCFGRRKK--KYSKHSANG 656
LDGIQGPVYVGTGCVF+RQALYGYEPPKGPKRPKM+SC CCPCFGRR+K K+SK+ NG
Sbjct: 584 LDGIQGPVYVGTGCVFKRQALYGYEPPKGPKRPKMISCGCCPCFGRRRKNKKFSKNDMNG 643
Query: 657 ENANLGGMDDDKELLMSQMNFEKKFGQSAIFVTSTLMEQGGVPPSSSPASLLKEAIHVIS 716
+ A LGG + DKE LMS+MNFEK FGQS+IFVTSTLME+GGVPPSSSPA LLKEAIHVIS
Sbjct: 644 DVAALGGAEGDKEHLMSEMNFEKTFGQSSIFVTSTLMEEGGVPPSSSPAVLLKEAIHVIS 703
Query: 717 CGYEDKTEWGLELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRAAFKGSAPINLSDRLN 776
CGYEDKTEWG ELGWIYGSITEDILTGFKMHCRGWRSIYCMPKR AFKGSAPINLSDRLN
Sbjct: 704 CGYEDKTEWGTELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRPAFKGSAPINLSDRLN 763
Query: 777 QVLRWALGSVEIFFSRHSPVWYGYKGGNLRFLERFAYVNTTIYPFTSIPLLAYCVLPAIC 836
QVLRWALGSVEIFFSRHSP+WYGYKGG L++LERFAY NTTIYPFTSIPLLAYC+LPAIC
Sbjct: 764 QVLRWALGSVEIFFSRHSPLWYGYKGGKLKWLERFAYANTTIYPFTSIPLLAYCILPAIC 823
Query: 837 LLTDKFIMPEIXXXXXXXXXXXXXXXXXXGILELRWSGVSIEEWWRNEQFWVIGGISAHL 896
LLTDKFIMP I GILELRWSGVSIEEWWRNEQFWVIGGISAHL
Sbjct: 824 LLTDKFIMPPISTFASLFFISLFMSIIVTGILELRWSGVSIEEWWRNEQFWVIGGISAHL 883
Query: 897 FAVVQGLLKILAGIDTNFTVTSKATDEDEEFGELYSFKWXXXXXXXXXXXXXXXVGVVAG 956
FAVVQGLLKILAGIDTNFTVTSKATD+D+ FGELY+FKW VGVVAG
Sbjct: 884 FAVVQGLLKILAGIDTNFTVTSKATDDDD-FGELYAFKWTTLLIPPTTVLIINIVGVVAG 942
Query: 957 ISDAINNGYQSWGPLFGKLFFAFWVILHLYPFLKGLMGRQNRTPTIVVIWSILLASIFSL 1016
ISDAINNGYQSWGPLFGKLFF+FWVI+HLYPFLKGLMGRQNRTPTIVVIWS+LLASIFSL
Sbjct: 943 ISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSL 1002
Query: 1017 LWVRIDPFVMKTKGPATTKCGINC 1040
LWVRIDPFV+KTKGP T+KCGINC
Sbjct: 1003 LWVRIDPFVLKTKGPDTSKCGINC 1026
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| TAIR|locus:2124167 IRX1 "IRREGULAR XYLEM 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2178193 CESA5 "cellulose synthase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2040080 CESA10 "cellulose synthase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2136308 CESA2 "cellulose synthase A2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2176090 CESA6 "cellulose synthase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2172457 CESA4 "cellulose synthase A4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2156789 CEV1 "CONSTITUTIVE EXPRESSION OF VSP 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2052576 CESA9 "cellulose synthase A9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2127776 CESA1 "cellulose synthase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| A2XN66 | CESA2_ORYSI | 2, ., 4, ., 1, ., 1, 2 | 0.6869 | 0.9605 | 0.9310 | N/A | no |
| A2Z1C8 | CESA9_ORYSI | 2, ., 4, ., 1, ., 1, 2 | 0.8249 | 0.9980 | 0.9838 | N/A | no |
| Q69P51 | CESA9_ORYSJ | 2, ., 4, ., 1, ., 1, 2 | 0.8249 | 0.9980 | 0.9838 | yes | no |
| A2XNT2 | CESA5_ORYSI | 2, ., 4, ., 1, ., 1, 2 | 0.6782 | 0.9971 | 0.9496 | N/A | no |
| A2Y0X2 | CESA1_ORYSI | 2, ., 4, ., 1, ., 1, 2 | 0.6759 | 0.9932 | 0.9600 | N/A | no |
| A2WV32 | CESA4_ORYSI | 2, ., 4, ., 1, ., 1, 2 | 0.6114 | 0.9144 | 0.9615 | N/A | no |
| Q9SWW6 | CESA7_ARATH | 2, ., 4, ., 1, ., 1, 2 | 0.8667 | 0.9836 | 0.9970 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 2.4.1.12 | 0.994 |
| 3rd Layer | 2.4.1 | 0.998 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00017182001 | SubName- Full=Chromosome chr11 scaffold_14, whole genome shotgun sequence; (1031 aa) | ||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1040 | |||
| PLN02189 | 1040 | PLN02189, PLN02189, cellulose synthase | 0.0 | |
| PLN02436 | 1094 | PLN02436, PLN02436, cellulose synthase A | 0.0 | |
| PLN02638 | 1079 | PLN02638, PLN02638, cellulose synthase A (UDP-form | 0.0 | |
| PLN02400 | 1085 | PLN02400, PLN02400, cellulose synthase | 0.0 | |
| PLN02915 | 1044 | PLN02915, PLN02915, cellulose synthase A [UDP-form | 0.0 | |
| PLN02195 | 977 | PLN02195, PLN02195, cellulose synthase A | 0.0 | |
| pfam03552 | 716 | pfam03552, Cellulose_synt, Cellulose synthase | 0.0 | |
| PLN02248 | 1135 | PLN02248, PLN02248, cellulose synthase-like protei | 0.0 | |
| PLN02893 | 734 | PLN02893, PLN02893, Cellulose synthase-like protei | 1e-165 | |
| PLN02190 | 756 | PLN02190, PLN02190, cellulose synthase-like protei | 1e-141 | |
| cd06421 | 234 | cd06421, CESA_CelA_like, CESA_CelA_like are involv | 1e-14 | |
| TIGR03030 | 713 | TIGR03030, CelA, cellulose synthase catalytic subu | 2e-13 | |
| cd06421 | 234 | cd06421, CESA_CelA_like, CESA_CelA_like are involv | 2e-11 | |
| COG1215 | 439 | COG1215, COG1215, Glycosyltransferases, probably i | 3e-10 | |
| TIGR03030 | 713 | TIGR03030, CelA, cellulose synthase catalytic subu | 3e-08 | |
| PRK11498 | 852 | PRK11498, bcsA, cellulose synthase catalytic subun | 3e-08 | |
| pfam14446 | 55 | pfam14446, Prok-RING_1, Prokaryotic RING finger fa | 4e-07 | |
| TIGR03030 | 713 | TIGR03030, CelA, cellulose synthase catalytic subu | 1e-05 | |
| cd06421 | 234 | cd06421, CESA_CelA_like, CESA_CelA_like are involv | 7e-05 | |
| pfam13632 | 194 | pfam13632, Glyco_trans_2_3, Glycosyl transferase f | 1e-04 | |
| cd06423 | 180 | cd06423, CESA_like, CESA_like is the cellulose syn | 2e-04 | |
| TIGR03937 | 407 | TIGR03937, PgaC_IcaA, poly-beta-1,6 N-acetyl-D-glu | 7e-04 | |
| PRK14583 | 444 | PRK14583, hmsR, N-glycosyltransferase; Provisional | 0.002 | |
| PRK11498 | 852 | PRK11498, bcsA, cellulose synthase catalytic subun | 0.004 |
| >gnl|CDD|215121 PLN02189, PLN02189, cellulose synthase | Back alignment and domain information |
|---|
Score = 2180 bits (5650), Expect = 0.0
Identities = 943/1042 (90%), Positives = 1003/1042 (96%), Gaps = 4/1042 (0%)
Query: 1 MEASAGLVAGSHNRNELVVIHNHEEPKPLKNLDAQVCEICGDEIGLTVDGDLFVACNECG 60
MEASAGLVAGSHNRNELVVIH HEEPKPL+NLD QVCEICGDEIGLTVDGDLFVACNECG
Sbjct: 1 MEASAGLVAGSHNRNELVVIHGHEEPKPLRNLDGQVCEICGDEIGLTVDGDLFVACNECG 60
Query: 61 FPVCRPCYEYERREGTQVCPQCKTRYKRLKGSPRVEGDEDEEDIDDIEHEFNIEDEKNKE 120
FPVCRPCYEYERREGTQ CPQCKTRYKRLKGSPRVEGD+DEEDIDDIEHEFNI+DE++K
Sbjct: 61 FPVCRPCYEYERREGTQNCPQCKTRYKRLKGSPRVEGDDDEEDIDDIEHEFNIDDEQDKN 120
Query: 121 KHVAD-MLHGKMSYGRGPDSDENSQFPPVIAGGRSRPVSGEFPVG-GYGHGDQMLSSSLH 178
KH+ + MLHGKMSYGRGPD DEN+QFPPVI G RSRPVSGEFP+G GYGHG+QMLSSSLH
Sbjct: 121 KHITEAMLHGKMSYGRGPDDDENNQFPPVITGVRSRPVSGEFPIGSGYGHGEQMLSSSLH 180
Query: 179 KRVHPYPVSEPGSARWDERKEGGWKDRMDDWKMQQGNLGPETDDANDPDMAMVDEARQPL 238
KRVHPYPVSEPGSA+WDE+KEGGWK+RMDDWKMQQGNLGP+ DD D DMA++DEARQPL
Sbjct: 181 KRVHPYPVSEPGSAKWDEKKEGGWKERMDDWKMQQGNLGPDPDDY-DADMALIDEARQPL 239
Query: 239 SRKVPIASSKINPYRMVIVARLVILAFFFRYRILNPVHDAIGLWLISVICEIWFAISWIL 298
SRKVPIASSK+NPYRMVIVARLV+LAFF RYRIL+PVHDAIGLWL S+ICEIWFA+SWIL
Sbjct: 240 SRKVPIASSKVNPYRMVIVARLVVLAFFLRYRILHPVHDAIGLWLTSIICEIWFAVSWIL 299
Query: 299 DQFPKWFPIDRETYLDRLSFRYEREGEPNMLAPVDIFVSTVDPLKEPPLVTANTVLSILA 358
DQFPKWFPIDRETYLDRLS RYEREGEPNML+PVDIFVSTVDPLKEPPLVTANTVLSILA
Sbjct: 300 DQFPKWFPIDRETYLDRLSLRYEREGEPNMLSPVDIFVSTVDPLKEPPLVTANTVLSILA 359
Query: 359 MDYPVDKISCYISDDGASIITFDALAETAEFARKWVPFCKKFAIEPRAPEMYFTLKVDYL 418
MDYPVDKISCY+SDDGAS++TF+AL+ETAEFARKWVPFCKKF+IEPRAPE YF+LKVDYL
Sbjct: 360 MDYPVDKISCYVSDDGASMLTFEALSETAEFARKWVPFCKKFSIEPRAPEFYFSLKVDYL 419
Query: 419 KDKVQPTFVKERRAMKREYEEFKVRINAIVARASKIPPEGWIMPDGTPWPGNNTRDHPGM 478
KDKVQPTFVKERRAMKREYEEFKVRINAIVA+A K+PPEGWIM DGTPWPGNNTRDHPGM
Sbjct: 420 KDKVQPTFVKERRAMKREYEEFKVRINAIVAKAQKVPPEGWIMQDGTPWPGNNTRDHPGM 479
Query: 479 IQVFLGQSGGHDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSGVLTNAPFMLNL 538
IQVFLG SGGHD EGNELPRLVYVSREKRPGFQHHKKAGAMNAL+RVS VLTNAPFMLNL
Sbjct: 480 IQVFLGHSGGHDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNL 539
Query: 539 DCDHYVNNSKAVRESMCFLMDPQTGRKVCYVQFPQRFDGIDRHDRYANRNTVFFDINMRG 598
DCDHY+NNSKAVRE+MCFLMDPQ GRKVCYVQFPQRFDGID HDRYANRNTVFFDINM+G
Sbjct: 540 DCDHYINNSKAVREAMCFLMDPQIGRKVCYVQFPQRFDGIDTHDRYANRNTVFFDINMKG 599
Query: 599 LDGIQGPVYVGTGCVFRRQALYGYEPPKGPKRPKMVSCDCCPCFGRRKKKYSKHSANGEN 658
LDGIQGPVYVGTGCVFRRQALYGY+PPKGPKRPKMV+CDCCPCFGRRKKK++K+ NGE
Sbjct: 600 LDGIQGPVYVGTGCVFRRQALYGYDPPKGPKRPKMVTCDCCPCFGRRKKKHAKNGLNGEV 659
Query: 659 ANLGGMDDDKELLMSQMNFEKKFGQSAIFVTSTLMEQGGVPPSSSPASLLKEAIHVISCG 718
A LGGM+ DKE+LMSQMNFEKKFGQSAIFVTSTLME+GGVPPSSSPA+LLKEAIHVISCG
Sbjct: 660 AALGGMESDKEMLMSQMNFEKKFGQSAIFVTSTLMEEGGVPPSSSPAALLKEAIHVISCG 719
Query: 719 YEDKTEWGLELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRAAFKGSAPINLSDRLNQV 778
YEDKT+WGLELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRAAFKGSAPINLSDRLNQV
Sbjct: 720 YEDKTDWGLELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRAAFKGSAPINLSDRLNQV 779
Query: 779 LRWALGSVEIFFSRHSPVWYGYKGGNLRFLERFAYVNTTIYPFTSIPLLAYCVLPAICLL 838
LRWALGSVEIFFSRHSP+ YGYKGGNL++LERFAYVNTTIYPFTS+PLLAYC LPAICLL
Sbjct: 780 LRWALGSVEIFFSRHSPLLYGYKGGNLKWLERFAYVNTTIYPFTSLPLLAYCTLPAICLL 839
Query: 839 TDKFIMPEISTFASLFFIALFISIFTTGILELRWSGVSIEEWWRNEQFWVIGGISAHLFA 898
T KFIMP ISTFASLFFIALF+SIF TGILELRWSGVSIEEWWRNEQFWVIGG+SAHLFA
Sbjct: 840 TGKFIMPPISTFASLFFIALFMSIFATGILELRWSGVSIEEWWRNEQFWVIGGVSAHLFA 899
Query: 899 VVQGLLKILAGIDTNFTVTSKATDEDEEFGELYSFKWTTLLIPPTTVLIINLVGVVAGIS 958
VVQGLLK+LAGIDTNFTVTSKATD D+EFGELY+FKWTTLLIPPTT+LIIN+VGVVAGIS
Sbjct: 900 VVQGLLKVLAGIDTNFTVTSKATD-DDEFGELYAFKWTTLLIPPTTLLIINIVGVVAGIS 958
Query: 959 DAINNGYQSWGPLFGKLFFAFWVILHLYPFLKGLMGRQNRTPTIVVIWSILLASIFSLLW 1018
DAINNGYQSWGPLFGKLFFAFWVI+HLYPFLKGLMGRQNRTPTIVVIWS+LLASIFSLLW
Sbjct: 959 DAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLW 1018
Query: 1019 VRIDPFVMKTKGPATTKCGINC 1040
VRIDPFV+KTKGP +CGINC
Sbjct: 1019 VRIDPFVLKTKGPDVKQCGINC 1040
|
Length = 1040 |
| >gnl|CDD|215239 PLN02436, PLN02436, cellulose synthase A | Back alignment and domain information |
|---|
| >gnl|CDD|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit | Back alignment and domain information |
|---|
| >gnl|CDD|215224 PLN02400, PLN02400, cellulose synthase | Back alignment and domain information |
|---|
| >gnl|CDD|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit | Back alignment and domain information |
|---|
| >gnl|CDD|215124 PLN02195, PLN02195, cellulose synthase A | Back alignment and domain information |
|---|
| >gnl|CDD|217611 pfam03552, Cellulose_synt, Cellulose synthase | Back alignment and domain information |
|---|
| >gnl|CDD|215138 PLN02248, PLN02248, cellulose synthase-like protein | Back alignment and domain information |
|---|
| >gnl|CDD|215483 PLN02893, PLN02893, Cellulose synthase-like protein | Back alignment and domain information |
|---|
| >gnl|CDD|215122 PLN02190, PLN02190, cellulose synthase-like protein | Back alignment and domain information |
|---|
| >gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
| >gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) | Back alignment and domain information |
|---|
| >gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
| >gnl|CDD|224136 COG1215, COG1215, Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) | Back alignment and domain information |
|---|
| >gnl|CDD|236918 PRK11498, bcsA, cellulose synthase catalytic subunit; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|222758 pfam14446, Prok-RING_1, Prokaryotic RING finger family 1 | Back alignment and domain information |
|---|
| >gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) | Back alignment and domain information |
|---|
| >gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
| >gnl|CDD|222273 pfam13632, Glyco_trans_2_3, Glycosyl transferase family group 2 | Back alignment and domain information |
|---|
| >gnl|CDD|133045 cd06423, CESA_like, CESA_like is the cellulose synthase superfamily | Back alignment and domain information |
|---|
| >gnl|CDD|188452 TIGR03937, PgaC_IcaA, poly-beta-1,6 N-acetyl-D-glucosamine synthase | Back alignment and domain information |
|---|
| >gnl|CDD|184755 PRK14583, hmsR, N-glycosyltransferase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|236918 PRK11498, bcsA, cellulose synthase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1040 | |||
| PLN02400 | 1085 | cellulose synthase | 100.0 | |
| PLN02436 | 1094 | cellulose synthase A | 100.0 | |
| PLN02189 | 1040 | cellulose synthase | 100.0 | |
| PLN02638 | 1079 | cellulose synthase A (UDP-forming), catalytic subu | 100.0 | |
| PLN02915 | 1044 | cellulose synthase A [UDP-forming], catalytic subu | 100.0 | |
| PLN02195 | 977 | cellulose synthase A | 100.0 | |
| PLN02248 | 1135 | cellulose synthase-like protein | 100.0 | |
| PF03552 | 720 | Cellulose_synt: Cellulose synthase; InterPro: IPR0 | 100.0 | |
| PLN02190 | 756 | cellulose synthase-like protein | 100.0 | |
| PLN02893 | 734 | Cellulose synthase-like protein | 100.0 | |
| TIGR03030 | 713 | CelA cellulose synthase catalytic subunit (UDP-for | 100.0 | |
| PRK11498 | 852 | bcsA cellulose synthase catalytic subunit; Provisi | 100.0 | |
| PF14569 | 80 | zf-UDP: Zinc-binding RING-finger; PDB: 1WEO_A. | 100.0 | |
| PRK05454 | 691 | glucosyltransferase MdoH; Provisional | 100.0 | |
| cd04191 | 254 | Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon | 100.0 | |
| COG1215 | 439 | Glycosyltransferases, probably involved in cell wa | 100.0 | |
| PRK14583 | 444 | hmsR N-glycosyltransferase; Provisional | 99.97 | |
| PRK11204 | 420 | N-glycosyltransferase; Provisional | 99.97 | |
| TIGR03111 | 439 | glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 | 99.97 | |
| PRK14716 | 504 | bacteriophage N4 adsorption protein B; Provisional | 99.96 | |
| PRK11234 | 727 | nfrB bacteriophage N4 adsorption protein B; Provis | 99.95 | |
| cd06421 | 234 | CESA_CelA_like CESA_CelA_like are involved in the | 99.95 | |
| cd06437 | 232 | CESA_CaSu_A2 Cellulose synthase catalytic subunit | 99.94 | |
| cd06427 | 241 | CESA_like_2 CESA_like_2 is a member of the cellulo | 99.93 | |
| cd06435 | 236 | CESA_NdvC_like NdvC_like proteins in this family a | 99.93 | |
| PF13641 | 228 | Glyco_tranf_2_3: Glycosyltransferase like family 2 | 99.9 | |
| PRK15489 | 703 | nfrB bacteriophage N4 adsorption protein B; Provis | 99.88 | |
| TIGR03472 | 373 | HpnI hopanoid biosynthesis associated glycosyl tra | 99.88 | |
| cd04190 | 244 | Chitin_synth_C C-terminal domain of Chitin Synthas | 99.87 | |
| cd04192 | 229 | GT_2_like_e Subfamily of Glycosyltransferase Famil | 99.86 | |
| cd02520 | 196 | Glucosylceramide_synthase Glucosylceramide synthas | 99.84 | |
| COG2943 | 736 | MdoH Membrane glycosyltransferase [Cell envelope b | 99.83 | |
| cd06434 | 235 | GT2_HAS Hyaluronan synthases catalyze polymerizati | 99.82 | |
| TIGR03469 | 384 | HonB hopene-associated glycosyltransferase HpnB. T | 99.81 | |
| cd06439 | 251 | CESA_like_1 CESA_like_1 is a member of the cellulo | 99.8 | |
| cd02525 | 249 | Succinoglycan_BP_ExoA ExoA is involved in the bios | 99.74 | |
| cd06436 | 191 | GlcNAc-1-P_transferase N-acetyl-glucosamine transf | 99.67 | |
| PF13632 | 193 | Glyco_trans_2_3: Glycosyl transferase family group | 99.66 | |
| cd06438 | 183 | EpsO_like EpsO protein participates in the methano | 99.56 | |
| cd04184 | 202 | GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot | 99.54 | |
| cd04195 | 201 | GT2_AmsE_like GT2_AmsE_like is involved in exopoly | 99.48 | |
| cd06433 | 202 | GT_2_WfgS_like WfgS and WfeV are involved in O-ant | 99.35 | |
| cd02510 | 299 | pp-GalNAc-T pp-GalNAc-T initiates the formation of | 99.34 | |
| cd04196 | 214 | GT_2_like_d Subfamily of Glycosyltransferase Famil | 99.32 | |
| cd02522 | 221 | GT_2_like_a GT_2_like_a represents a glycosyltrans | 99.29 | |
| cd06420 | 182 | GT2_Chondriotin_Pol_N N-terminal domain of Chondro | 99.28 | |
| PF13506 | 175 | Glyco_transf_21: Glycosyl transferase family 21 | 99.27 | |
| cd06913 | 219 | beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran | 99.25 | |
| PLN02726 | 243 | dolichyl-phosphate beta-D-mannosyltransferase | 99.25 | |
| cd04186 | 166 | GT_2_like_c Subfamily of Glycosyltransferase Famil | 99.24 | |
| PF03142 | 527 | Chitin_synth_2: Chitin synthase; InterPro: IPR0048 | 99.22 | |
| cd06442 | 224 | DPM1_like DPM1_like represents putative enzymes si | 99.2 | |
| cd04185 | 202 | GT_2_like_b Subfamily of Glycosyltransferase Famil | 99.18 | |
| cd06423 | 180 | CESA_like CESA_like is the cellulose synthase supe | 99.17 | |
| cd02526 | 237 | GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr | 99.15 | |
| PF00535 | 169 | Glycos_transf_2: Glycosyl transferase family 2; In | 99.11 | |
| PF14570 | 48 | zf-RING_4: RING/Ubox like zinc-binding domain; PDB | 99.09 | |
| PRK10073 | 328 | putative glycosyl transferase; Provisional | 99.02 | |
| cd04188 | 211 | DPG_synthase DPG_synthase is involved in protein N | 99.01 | |
| PRK10018 | 279 | putative glycosyl transferase; Provisional | 98.97 | |
| PRK10063 | 248 | putative glycosyl transferase; Provisional | 98.91 | |
| cd04179 | 185 | DPM_DPG-synthase_like DPM_DPG-synthase_like is a m | 98.88 | |
| TIGR01556 | 281 | rhamnosyltran L-rhamnosyltransferase. Rhamnolipids | 98.84 | |
| PTZ00260 | 333 | dolichyl-phosphate beta-glucosyltransferase; Provi | 98.71 | |
| cd04187 | 181 | DPM1_like_bac Bacterial DPM1_like enzymes are rela | 98.67 | |
| cd00761 | 156 | Glyco_tranf_GTA_type Glycosyltransferase family A | 98.64 | |
| COG1216 | 305 | Predicted glycosyltransferases [General function p | 98.64 | |
| PF10111 | 281 | Glyco_tranf_2_2: Glycosyltransferase like family 2 | 98.61 | |
| PRK13915 | 306 | putative glucosyl-3-phosphoglycerate synthase; Pro | 98.5 | |
| KOG2571 | 862 | consensus Chitin synthase/hyaluronan synthase (gly | 98.43 | |
| PRK10714 | 325 | undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi | 98.24 | |
| COG0463 | 291 | WcaA Glycosyltransferases involved in cell wall bi | 97.86 | |
| KOG2547 | 431 | consensus Ceramide glucosyltransferase [Lipid tran | 97.8 | |
| cd02511 | 229 | Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 | 97.79 | |
| COG5175 | 480 | MOT2 Transcriptional repressor [Transcription] | 96.85 | |
| PF14446 | 54 | Prok-RING_1: Prokaryotic RING finger family 1 | 96.14 | |
| cd02514 | 334 | GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es | 96.13 | |
| TIGR00570 | 309 | cdk7 CDK-activating kinase assembly factor MAT1. A | 95.47 | |
| KOG2978 | 238 | consensus Dolichol-phosphate mannosyltransferase [ | 95.32 | |
| PF02364 | 817 | Glucan_synthase: 1,3-beta-glucan synthase componen | 94.31 | |
| KOG2977 | 323 | consensus Glycosyltransferase [General function pr | 93.42 | |
| PF05290 | 140 | Baculo_IE-1: Baculovirus immediate-early protein ( | 89.23 | |
| cd00162 | 45 | RING RING-finger (Really Interesting New Gene) dom | 88.5 | |
| smart00504 | 63 | Ubox Modified RING finger domain. Modified RING fi | 82.97 | |
| KOG3737 | 603 | consensus Predicted polypeptide N-acetylgalactosam | 80.73 |
| >PLN02400 cellulose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-310 Score=2746.30 Aligned_cols=1024 Identities=70% Similarity=1.267 Sum_probs=948.6
Q ss_pred CCCCccceecccCCceEEEEecCCC--CCCCCCCCCcccccccccccccCCCCeeecCCCCCCCcccchhHHHHhhCCCC
Q 039060 1 MEASAGLVAGSHNRNELVVIHNHEE--PKPLKNLDAQVCEICGDEIGLTVDGDLFVACNECGFPVCRPCYEYERREGTQV 78 (1040)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~c~iCg~~vg~~~~G~~fvaC~eC~FpvCRpCyeyerkeG~~~ 78 (1040)
||+++|||||||||||||+|++|++ +||++++++|+||||||+||+|+|||+|||||||||||||||||||||||||+
T Consensus 1 ~~~~~glvaGSh~Rnelv~i~~d~~~g~kp~~~~~gqiCqICGD~VG~t~dGe~FVAC~eCaFPVCRpCYEYERkeGnq~ 80 (1085)
T PLN02400 1 MEANAGMVAGSYRRNELVRIRHDSDSGPKPLKNLNGQICQICGDDVGVTETGDVFVACNECAFPVCRPCYEYERKDGTQC 80 (1085)
T ss_pred CCCccccccccccccceeeecccccccCCCccccCCceeeecccccCcCCCCCEEEEEccCCCccccchhheecccCCcc
Confidence 9999999999999999999998854 58999999999999999999999999999999999999999999999999999
Q ss_pred CCCChhhhhcccCCCCCCCCCCcccccchhcccccchh-hhhhhhhhhhccccccCCCCCCC-----CCCCCCCCcccCC
Q 039060 79 CPQCKTRYKRLKGSPRVEGDEDEEDIDDIEHEFNIEDE-KNKEKHVADMLHGKMSYGRGPDS-----DENSQFPPVIAGG 152 (1040)
Q Consensus 79 CpqCkt~Ykr~kg~p~v~gd~~e~~~~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 152 (1040)
|||||||||||||||||+|||||||+||+||||||..+ +.++++++ |++.+- +..+++| +|++|
T Consensus 81 CPQCkTrYkR~KgsprV~GDeeedd~DDlenEf~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~p-~lt~g 150 (1085)
T PLN02400 81 CPQCKTRYRRHKGSPRVEGDEDEDDVDDLENEFNYAQGNGKARHQWQ---------GEDIELSSSSRHESQPIP-LLTHG 150 (1085)
T ss_pred CcccCCccccccCCCCCCcccccccchhhhhhhcccccccccccccc---------ccCccccCcccccCCCCc-cccCC
Confidence 99999999999999999999999999999999999642 22222321 333221 1124577 99999
Q ss_pred CCCCCCCCCCCCCCCCCcccccCC------CCCccccCCCCCCCC----CccCCcCCCC--------cchhhhHHhhhhc
Q 039060 153 RSRPVSGEFPVGGYGHGDQMLSSS------LHKRVHPYPVSEPGS----ARWDERKEGG--------WKDRMDDWKMQQG 214 (1040)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~----~~~~~~~~~~--------~~~~~~~~~~~~~ 214 (1040)
|. ++||+++++++|+ . +.++ .|+||||+||+|+.+ ..+||+||++ ||||||+||.||+
T Consensus 151 ~~--~s~ei~~~~~~~~-~-~~~~~~~~~~~~~~vh~~p~~d~~~~~~~~~~d~~~~~~~~g~g~~~wkerv~~wk~~~~ 226 (1085)
T PLN02400 151 QP--VSGEIPCATPDNQ-S-VRTTSGPLGPAERNANSSPYIDPRQPVPVRIVDPSKDLNSYGLGNVDWKERVEGWKLKQD 226 (1085)
T ss_pred cc--cCCCCCCCCCccc-c-ccCCcccccccCCcccccCccCcccCCCccccCccccccccccCcHHHHHHHHHHHhhhh
Confidence 85 7999998776664 2 3443 358999999999764 3399999977 9999999999996
Q ss_pred CC----------C--CC--CCCCCCccchhhhccCCCceeEeeccCCCcchhHHHHHHHHHHHHHHHHHHhhcCccchHH
Q 039060 215 NL----------G--PE--TDDANDPDMAMVDEARQPLSRKVPIASSKINPYRMVIVARLVILAFFFRYRILNPVHDAIG 280 (1040)
Q Consensus 215 ~~----------~--~~--~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~~yR~~~~~~l~~l~~~l~wR~~~~~~~a~~ 280 (1040)
+. + ++ +++++++|+++||++++||+||+++++++|+|||++++++|+++++||+||++|++++++|
T Consensus 227 k~~~~~~~~~~~~~~g~~~~~~~~~~d~~~~~~~~~pL~~~~~i~~~~~~~yR~~~~~~lv~l~~~l~yRi~~~~~~~~~ 306 (1085)
T PLN02400 227 KNMMQMTNKYHEGKGGDMEGTGSNGDELQMADDARLPMSRVVPIPSSRLTPYRIVIILRLIILGFFLQYRVTHPVKDAYG 306 (1085)
T ss_pred hhccccccccccccccCCCCCCCCcccccccccccCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCcccHH
Confidence 21 1 12 1133467899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCccccccccchhhhhhhhhccCCCCCCCCCeEEEEecCCCCCCChHHHHHHHHHHHcCC
Q 039060 281 LWLISVICEIWFAISWILDQFPKWFPIDRETYLDRLSFRYEREGEPNMLAPVDIFVSTVDPLKEPPLVTANTVLSILAMD 360 (1040)
Q Consensus 281 lwl~~~~~Ei~f~~~wiL~q~~kw~Pv~R~~~~drL~~r~~~~~~~~~lp~VDV~V~t~nP~kEp~~~v~~Tv~s~la~d 360 (1040)
+|+++++||+||+|+|+|+|++||+||+|+||+|||++||++++++++||+|||||+|+||.||||++|+|||||+||+|
T Consensus 307 ~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~D 386 (1085)
T PLN02400 307 LWLTSVICEIWFALSWLLDQFPKWYPINRETYLDRLALRYDRDGEPSQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVD 386 (1085)
T ss_pred HHHHHHHHHHHHHHHHHHccCcccccccceeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999988889999999999999999999999999999999999
Q ss_pred CCCCCeEEEEecCCCChhhHHHHHHHHHHhhhhhhhhhhhcCCCCCcccccccccccccCCCChhHHHHHHHHHHHHHHH
Q 039060 361 YPVDKISCYISDDGASIITFDALAETAEFARKWVPFCKKFAIEPRAPEMYFTLKVDYLKDKVQPTFVKERRAMKREYEEF 440 (1040)
Q Consensus 361 YP~~kl~vyv~DDG~~~lt~~al~Eaa~fA~~WvPFCkk~~iepR~Pe~YFs~k~d~~~~~~~~~f~~err~mkreYee~ 440 (1040)
||+|||+|||||||+++||||||.|||+|||+||||||||+|||||||+||++|.|+++++.+|+|++|||+||||||||
T Consensus 387 YP~eKlscYvSDDGgS~LTf~Al~Eaa~FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~ 466 (1085)
T PLN02400 387 YPVDKVSCYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEF 466 (1085)
T ss_pred ccccceEEEEecCCchHHHHHHHHHHHHHHHhhcchhhhcCCCcCCHHHHhccCCCcccCCCchhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCccCCCCCCCCCCCCCCCccceeeeccCCCCCCCCCCCcCcEEEEecccCCCCCCCCchhhhH
Q 039060 441 KVRINAIVARASKIPPEGWIMPDGTPWPGNNTRDHPGMIQVFLGQSGGHDAEGNELPRLVYVSREKRPGFQHHKKAGAMN 520 (1040)
Q Consensus 441 k~ri~~l~~k~~~vp~e~w~m~dg~~w~g~~~rdHp~iiqv~l~~~g~~d~~~~~lP~lvYvsRekRpg~~hh~KAGALN 520 (1040)
|+|||+|+++++++|+++|+|+||++|||++++|||+|||||++++|+.|.+|++||+||||||||||||+||+||||||
T Consensus 467 k~RIe~l~~~~~~~~~~~~~m~dgt~W~g~~~~dHp~iIqVll~~~~~~d~~g~~LP~LVYVSREKRP~~~Hh~KAGAMN 546 (1085)
T PLN02400 467 KVRINALVAKAQKIPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMN 546 (1085)
T ss_pred HHHHHHHHhhhccCCccccccccCccCCCCCCCCCchhhhhhhcCCCCcccccccCceeEEEeccCCCCCCcchhhhhhH
Confidence 99999999999999999999999999999999999999999999999989999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCEEEEecCCCCCCchHHHHHHHHhhcCCCCCCceEEEecCccccCCCchhhhhhhhhhhhhhhccccc
Q 039060 521 ALVRVSGVLTNAPFMLNLDCDHYVNNSKAVRESMCFLMDPQTGRKVCYVQFPQRFDGIDRHDRYANRNTVFFDINMRGLD 600 (1040)
Q Consensus 521 allrvSav~tngp~Il~lDcD~~~~~p~~Lr~amcff~Dp~~g~~va~VQ~PQ~F~nid~~D~y~n~~~vFfdi~~~gld 600 (1040)
+|+||||+|||||||||||||||+|||+++|+||||||||+.|+++|||||||+|+|+|++|+|+|+++||||++|+|+|
T Consensus 547 aLlRVSavmTNaP~ILNlDCDmY~Nns~a~r~AMCf~lD~~~g~~~afVQFPQrF~gi~~~D~Y~n~~~vffdi~~~Gld 626 (1085)
T PLN02400 547 ALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMMDPAIGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINLKGLD 626 (1085)
T ss_pred HHHHHhhhhcCCceEEecccccccCCchhHHhhhhheeccCCCceeEEEeCCcccCCCCCCCCcccceeEEeeccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccccccccchhhhhhcCCCCCCCCCCCCCccCCCCCCCCcccccccccc---------c----CCccccCC-----
Q 039060 601 GIQGPVYVGTGCVFRRQALYGYEPPKGPKRPKMVSCDCCPCFGRRKKKYSKHS---------A----NGENANLG----- 662 (1040)
Q Consensus 601 g~qgp~yvGTGcvfRR~ALyG~~p~~~~~~~~~~~~~~~~c~~~~~~~~~~~~---------~----~~~~~~~~----- 662 (1040)
|+|||+|+||||+|||+||||++|+..+..... ...|++||+.|+++++++. + ..++++++
T Consensus 627 GlqGP~YvGTGC~frR~aLYG~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 705 (1085)
T PLN02400 627 GIQGPVYVGTGCCFNRQALYGYDPVLTEEDLEP-NIIVKSCCGSRKKGKGSKKYNIDKKRAMKRTESNVPIFNMEDIEEG 705 (1085)
T ss_pred cCCCccccccCcceeeeeeccCCCccccccccc-cccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999999999998765332111 2234557776655432210 0 12445544
Q ss_pred --CCChhhHHHhhhhhHhhhcCcchHHHhhhhhhhCCCCCCCCchhHHHHHHHhccccccccCccccccCcccccccchH
Q 039060 663 --GMDDDKELLMSQMNFEKKFGQSAIFVTSTLMEQGGVPPSSSPASLLKEAIHVISCGYEDKTEWGLELGWIYGSITEDI 740 (1040)
Q Consensus 663 --~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~~~~~~~~~a~~v~sC~YE~~T~WG~evGW~ygsvTED~ 740 (1040)
+++++++.++++++++++||+|.+|++|++++.||.+...+++++++||++|+||+||++|+||+||||+|||+|||+
T Consensus 706 ~~~~~~~~~~~~~~~~l~~~fG~S~~fi~S~~~~~~~~~~~~~~~~ll~eA~~V~sC~YE~~T~WG~evGwiYGSvTED~ 785 (1085)
T PLN02400 706 VEGYDDERSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDI 785 (1085)
T ss_pred cccccchhhhhhhhhhhhhhccccHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhhccCCccCCchhhhhCeeccceechH
Confidence 466788888999999999999999999999999999988899999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCcEEEEeCCCcccccccCCCCHHHHHHHHHHhhccchhHHhhcCCcccccccCCCCCccchhhhhhhhhhh
Q 039060 741 LTGFKMHCRGWRSIYCMPKRAAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPVWYGYKGGNLRFLERFAYVNTTIYP 820 (1040)
Q Consensus 741 ~tg~rLh~~GWrsvY~~~~~~af~G~aP~tl~~~l~QR~RWA~G~lQil~sk~~PL~~g~~~~~L~l~QRL~Yl~~~ly~ 820 (1040)
.||++||++||||+|++|++++|.|+||+|+.++++||+|||+|++||+++++||+++|+. ++|+++|||+|+++++||
T Consensus 786 ~TG~~LH~rGWrSvY~~p~r~af~GlAP~~l~d~L~Qr~RWA~G~lqI~~sr~nPl~~G~~-~~L~l~QRL~Yl~~~~y~ 864 (1085)
T PLN02400 786 LTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYN-GRLKLLERLAYINTIVYP 864 (1085)
T ss_pred HHHHHHHccCCceEecCCCcHhhcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccC-CCCCHHHHHHHHHHHHHH
Confidence 9999999999999999998999999999999999999999999999999999999998763 469999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhCCCccccchhHHHHHHHHHHHHHHHHHHHHhhhcCccchhhhcccchhhHHHHHHHHHHHH
Q 039060 821 FTSIPLLAYCVLPAICLLTDKFIMPEISTFASLFFIALFISIFTTGILELRWSGVSIEEWWRNEQFWVIGGISAHLFAVV 900 (1040)
Q Consensus 821 l~slp~liy~llP~l~Ll~G~~iip~~s~~~~~~fi~lfls~~~~~lLe~rwsG~si~~wWrne~~W~I~~~sa~lfav~ 900 (1040)
++++|+++|+++|++||++|++++|.++++++++|+++|+++++++++|++|+|+++++||||||||+|+++|+||||++
T Consensus 865 ~~slp~liY~llP~l~LltG~~i~P~vs~~~~~~fi~lf~~~~~~~lLE~~~sG~si~~WWrnQq~w~I~~~Sa~Lfavl 944 (1085)
T PLN02400 865 ITSIPLLAYCVLPAFCLITNKFIIPEISNYASMWFILLFISIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVF 944 (1085)
T ss_pred HHHHHHHHHHHHHHHHHHcCCccCCccchHHHHHHHHHHHHHHHHHHHHHhhcCccHHHhhhccceeeehhhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCeEeccCCCCccccccceeeeccccchHHHHHHHHHHHHHHHHHHHHhHhcCCCCCchhhHHHHHHHH
Q 039060 901 QGLLKILAGIDTNFTVTSKATDEDEEFGELYSFKWTTLLIPPTTVLIINLVGVVAGISDAINNGYQSWGPLFGKLFFAFW 980 (1040)
Q Consensus 901 ~allkvL~g~~~~F~VTpK~~~~~~~~~~ly~f~ws~L~iP~~tLlllnliaiv~Gi~~~i~~g~~~w~~l~g~l~~~~W 980 (1040)
++++|+|++++++|.||+|..++++.++++|+|+|+++++|++|++++||+|+++|+++++++++++|+++++++||++|
T Consensus 945 ~~ilKvLgg~~~~F~VTsK~~d~~~~~~ely~f~~s~L~iP~ttl~llNlvaiv~Gv~~~i~~g~~~~g~l~~~~~~~~w 1024 (1085)
T PLN02400 945 QGLLKVLAGIDTNFTVTSKASDEDGDFAELYVFKWTSLLIPPTTVLLVNLVGIVAGVSYAINSGYQSWGPLFGKLFFAIW 1024 (1085)
T ss_pred HHHHHHhcCCcccceecCCcccccccccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHH
Confidence 99999999999999999999875556789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHhheeeccCCccCCCC-cccccCCCC
Q 039060 981 VILHLYPFLKGLMGRQNRTPTIVVIWSILLASIFSLLWVRIDPFVMKTKGP-ATTKCGINC 1040 (1040)
Q Consensus 981 vi~~l~Pfl~gL~gR~~r~P~~v~~~s~~la~~f~~l~v~i~~~~~~~~~~-~~~~~~~~~ 1040 (1040)
|++|+|||+||||||++|+|+||++||++||++|+||||+|+||+++++|| ++++|||+|
T Consensus 1025 vvv~l~Pf~kgL~gR~~r~P~~v~~~s~lla~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~ 1085 (1085)
T PLN02400 1025 VIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRIDPFVSDTTKAAANGQCGVNC 1085 (1085)
T ss_pred HHHHHHHHHHHHhccCCCCceeHHHHHHHHHHHHHHHheeccccccCCCCchhHhhcCcCC
Confidence 999999999999999999999999999999999999999999999999999 899999999
|
|
| >PLN02436 cellulose synthase A | Back alignment and domain information |
|---|
| >PLN02189 cellulose synthase | Back alignment and domain information |
|---|
| >PLN02638 cellulose synthase A (UDP-forming), catalytic subunit | Back alignment and domain information |
|---|
| >PLN02915 cellulose synthase A [UDP-forming], catalytic subunit | Back alignment and domain information |
|---|
| >PLN02195 cellulose synthase A | Back alignment and domain information |
|---|
| >PLN02248 cellulose synthase-like protein | Back alignment and domain information |
|---|
| >PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals | Back alignment and domain information |
|---|
| >PLN02190 cellulose synthase-like protein | Back alignment and domain information |
|---|
| >PLN02893 Cellulose synthase-like protein | Back alignment and domain information |
|---|
| >TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming) | Back alignment and domain information |
|---|
| >PRK11498 bcsA cellulose synthase catalytic subunit; Provisional | Back alignment and domain information |
|---|
| >PF14569 zf-UDP: Zinc-binding RING-finger; PDB: 1WEO_A | Back alignment and domain information |
|---|
| >PRK05454 glucosyltransferase MdoH; Provisional | Back alignment and domain information |
|---|
| >cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan | Back alignment and domain information |
|---|
| >COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >PRK14583 hmsR N-glycosyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK11204 N-glycosyltransferase; Provisional | Back alignment and domain information |
|---|
| >TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 | Back alignment and domain information |
|---|
| >PRK14716 bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
| >PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
| >cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
| >cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex | Back alignment and domain information |
|---|
| >cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily | Back alignment and domain information |
|---|
| >cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase | Back alignment and domain information |
|---|
| >PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A | Back alignment and domain information |
|---|
| >PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
| >TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI | Back alignment and domain information |
|---|
| >cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin | Back alignment and domain information |
|---|
| >cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
| >cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis | Back alignment and domain information |
|---|
| >COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan | Back alignment and domain information |
|---|
| >TIGR03469 HonB hopene-associated glycosyltransferase HpnB | Back alignment and domain information |
|---|
| >cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily | Back alignment and domain information |
|---|
| >cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan | Back alignment and domain information |
|---|
| >cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine | Back alignment and domain information |
|---|
| >PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2 | Back alignment and domain information |
|---|
| >cd06438 EpsO_like EpsO protein participates in the methanolan synthesis | Back alignment and domain information |
|---|
| >cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis | Back alignment and domain information |
|---|
| >cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis | Back alignment and domain information |
|---|
| >cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis | Back alignment and domain information |
|---|
| >cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans | Back alignment and domain information |
|---|
| >cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
| >cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function | Back alignment and domain information |
|---|
| >cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase | Back alignment and domain information |
|---|
| >PF13506 Glyco_transf_21: Glycosyl transferase family 21 | Back alignment and domain information |
|---|
| >cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine | Back alignment and domain information |
|---|
| >PLN02726 dolichyl-phosphate beta-D-mannosyltransferase | Back alignment and domain information |
|---|
| >cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
| >PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2 | Back alignment and domain information |
|---|
| >cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1 | Back alignment and domain information |
|---|
| >cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
| >cd06423 CESA_like CESA_like is the cellulose synthase superfamily | Back alignment and domain information |
|---|
| >cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase | Back alignment and domain information |
|---|
| >PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
| >PF14570 zf-RING_4: RING/Ubox like zinc-binding domain; PDB: 1E4U_A 1UR6_B | Back alignment and domain information |
|---|
| >PRK10073 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
| >cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation | Back alignment and domain information |
|---|
| >PRK10018 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
| >PRK10063 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
| >cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily | Back alignment and domain information |
|---|
| >TIGR01556 rhamnosyltran L-rhamnosyltransferase | Back alignment and domain information |
|---|
| >PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 | Back alignment and domain information |
|---|
| >cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold | Back alignment and domain information |
|---|
| >COG1216 Predicted glycosyltransferases [General function prediction only] | Back alignment and domain information |
|---|
| >PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ] | Back alignment and domain information |
|---|
| >PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional | Back alignment and domain information |
|---|
| >KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
| >PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional | Back alignment and domain information |
|---|
| >COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
| >cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide | Back alignment and domain information |
|---|
| >COG5175 MOT2 Transcriptional repressor [Transcription] | Back alignment and domain information |
|---|
| >PF14446 Prok-RING_1: Prokaryotic RING finger family 1 | Back alignment and domain information |
|---|
| >cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides | Back alignment and domain information |
|---|
| >TIGR00570 cdk7 CDK-activating kinase assembly factor MAT1 | Back alignment and domain information |
|---|
| >KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only] | Back alignment and domain information |
|---|
| >PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
| >KOG2977 consensus Glycosyltransferase [General function prediction only] | Back alignment and domain information |
|---|
| >PF05290 Baculo_IE-1: Baculovirus immediate-early protein (IE-0); InterPro: IPR007954 This entry contains the Baculovirus immediate-early protein IE-0 | Back alignment and domain information |
|---|
| >cd00162 RING RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in mediating protein-protein interactions; identified in a proteins with a wide range of functions such as viral replication, signal transduction, and development; has two variants, the C3HC4-type and a C3H2C3-type (RING-H2 finger), which have different cysteine/histidine pattern; a subset of RINGs are associated with B-Boxes (C-X2-H-X7-C-X7-C-X2-C-H-X2-H) | Back alignment and domain information |
|---|
| >smart00504 Ubox Modified RING finger domain | Back alignment and domain information |
|---|
| >KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1040 | ||||
| 1weo_A | 93 | Solution Structure Of Ring-Finger In The Catalytic | 1e-33 | ||
| 4hg6_A | 802 | Structure Of A Cellulose Synthase - Cellulose Trans | 8e-06 |
| >pdb|1WEO|A Chain A, Solution Structure Of Ring-Finger In The Catalytic Subunit (Irx3) Of Cellulose Synthase Length = 93 | Back alignment and structure |
|
| >pdb|4HG6|A Chain A, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate Length = 802 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1 Length = 93 | Back alignment and structure |
|---|
Score = 157 bits (399), Expect = 1e-45
Identities = 73/88 (82%), Positives = 76/88 (86%)
Query: 23 HEEPKPLKNLDAQVCEICGDEIGLTVDGDLFVACNECGFPVCRPCYEYERREGTQVCPQC 82
PKPLKNLD Q CEICGD+IGLTV+GDLFVACNECGFP CRPCYEYERREGTQ CPQC
Sbjct: 5 SSGPKPLKNLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQC 64
Query: 83 KTRYKRLKGSPRVEGDEDEEDIDDIEHE 110
KTRYKRL+GSPRVEGDEDEEDID
Sbjct: 65 KTRYKRLRGSPRVEGDEDEEDIDSGPSS 92
|
| >1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B Length = 78 | Back alignment and structure |
|---|
| >2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus} Length = 153 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1040 | |||
| 4hg6_A | 802 | Cellulose synthase subunit A; membrane translocati | 100.0 | |
| 1weo_A | 93 | Cellulose synthase, catalytic subunit (IRX3); stru | 100.0 | |
| 2z86_A | 625 | Chondroitin synthase; GT-A, glycosyltransferase A, | 99.61 | |
| 1xhb_A | 472 | Polypeptide N-acetylgalactosaminyltransferase 1; g | 99.55 | |
| 3bcv_A | 240 | Putative glycosyltransferase protein; protein stru | 99.54 | |
| 2d7i_A | 570 | Polypeptide N-acetylgalactosaminyltransferase 10; | 99.53 | |
| 1qg8_A | 255 | Protein (spore coat polysaccharide biosynthesis P | 99.51 | |
| 2ffu_A | 501 | Ppgalnact-2, polypeptide N-acetylgalactosaminyltra | 99.48 | |
| 2z86_A | 625 | Chondroitin synthase; GT-A, glycosyltransferase A, | 99.43 | |
| 3ckj_A | 329 | Putative uncharacterized protein; mycobacteria, un | 99.13 | |
| 3l7i_A | 729 | Teichoic acid biosynthesis protein F; GT-B fold, m | 99.11 | |
| 4fix_A | 657 | UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 | 99.1 | |
| 2fy7_A | 287 | Beta-1,4-galactosyltransferase 1; M339H mutant, AP | 98.85 | |
| 3f1y_A | 387 | Mannosyl-3-phosphoglycerate synthase; GT-A type gl | 98.52 | |
| 2nxv_A | 249 | ATP synthase subunits region ORF 6; majastridin, A | 98.13 | |
| 1fo8_A | 343 | Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetyl | 96.83 | |
| 2bo4_A | 397 | Mannosylglycerate synthase; catalysis, glycosyltra | 96.74 | |
| 1e4u_A | 78 | Transcriptional repressor NOT4; gene regulation, t | 96.61 | |
| 2zu9_A | 394 | Mannosyl-3-phosphoglycerate synthase; GT-A fold, g | 96.13 | |
| 2wvl_A | 391 | Mannosyl-3-phosphoglycerate synthase; GT-A fold, t | 96.05 | |
| 1vyx_A | 60 | ORF K3, K3RING; zinc-binding protein, ring domain, | 88.46 | |
| 2ea6_A | 69 | Ring finger protein 4; RNF4, RES4-26, ring domain, | 87.11 | |
| 2d8s_A | 80 | Cellular modulator of immune recognition; C-MIR, m | 87.05 | |
| 1g25_A | 65 | CDK-activating kinase assembly factor MAT1; ring f | 86.21 | |
| 2csz_A | 76 | Synaptotagmin-like protein 4; exophilin 2, granuph | 85.32 | |
| 1t1h_A | 78 | Gspef-atpub14, armadillo repeat containing protein | 85.19 | |
| 2ect_A | 78 | Ring finger protein 126; metal binding protein, st | 84.59 | |
| 2xeu_A | 64 | Ring finger protein 4; transcription, zinc-finger, | 83.63 | |
| 2ckl_B | 165 | Ubiquitin ligase protein RING2; BMI1, RING1B, poly | 82.88 | |
| 1iym_A | 55 | EL5; ring-H2 finger, ubiquitin ligase, DNA binding | 82.4 | |
| 2ecm_A | 55 | Ring finger and CHY zinc finger domain- containing | 81.4 | |
| 2c2l_A | 281 | CHIP, carboxy terminus of HSP70-interacting protei | 81.38 | |
| 3ng2_A | 71 | RNF4, snurf, ring finger protein 4; ring domain, E | 81.14 | |
| 2ysl_A | 73 | Tripartite motif-containing protein 31; ring-type | 81.08 |
| >4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-51 Score=500.66 Aligned_cols=491 Identities=23% Similarity=0.365 Sum_probs=375.0
Q ss_pred hHH-HHHHHHHHHHHHHHHHhhcCccc-----hHHHHHHHHHHHHHHHHHHHHhhcCccccccccchhhhhhhhhccCCC
Q 039060 252 YRM-VIVARLVILAFFFRYRILNPVHD-----AIGLWLISVICEIWFAISWILDQFPKWFPIDRETYLDRLSFRYEREGE 325 (1040)
Q Consensus 252 yR~-~~~~~l~~l~~~l~wR~~~~~~~-----a~~lwl~~~~~Ei~f~~~wiL~q~~kw~Pv~R~~~~drL~~r~~~~~~ 325 (1040)
.|+ ++++.+++.++|++||++.+++. ++++|++++++|+++.+.|++..+..+.|..|...++ ..
T Consensus 65 ~~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~~~~~~~~r~~~~~---------~~ 135 (802)
T 4hg6_A 65 PRFLLLSAASMLVMRYWFWRLFETLPPPALDASFLFALLLFAVETFSISIFFLNGFLSADPTDRPFPRP---------LQ 135 (802)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCCCC---------CC
T ss_pred hHHHHHHHHHHHHHHHHHHHhheecCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCC---------CC
Confidence 354 45666667789999999987652 3567888999999999999999999999998875432 13
Q ss_pred CCCCCCeEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEecCCCChhhHHHHHHHHHHhhhhhhhhhhhcCCCC
Q 039060 326 PNMLAPVDIFVSTVDPLKEPPLVTANTVLSILAMDYPVDKISCYISDDGASIITFDALAETAEFARKWVPFCKKFAIEPR 405 (1040)
Q Consensus 326 ~~~lp~VDV~V~t~nP~kEp~~~v~~Tv~s~la~dYP~~kl~vyv~DDG~~~lt~~al~Eaa~fA~~WvPFCkk~~iepR 405 (1040)
++++|.|+|+||+|| |++.++++||.|+++++||.++++|+|+|||+++-|.+.
T Consensus 136 ~~~~P~VSViIPtyN---e~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~----------------------- 189 (802)
T 4hg6_A 136 PEELPTVDILVPSYN---EPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMS----------------------- 189 (802)
T ss_dssp TTTCCCEEEEEECTT---CCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTC-----------------------
T ss_pred ccCCCcEEEEEEECC---CCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCcccccc-----------------------
Confidence 567999999999998 999999999999999999999999999999999865431
Q ss_pred CcccccccccccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccCCCCCCCCCCCCCCCccceeeeccC
Q 039060 406 APEMYFTLKVDYLKDKVQPTFVKERRAMKREYEEFKVRINAIVARASKIPPEGWIMPDGTPWPGNNTRDHPGMIQVFLGQ 485 (1040)
Q Consensus 406 ~Pe~YFs~k~d~~~~~~~~~f~~err~mkreYee~k~ri~~l~~k~~~vp~e~w~m~dg~~w~g~~~rdHp~iiqv~l~~ 485 (1040)
.+|+.+++..+ .+++ ++.++++.
T Consensus 190 ----------------~d~~i~~~~~~---~~~~----l~~~~~~~---------------------------------- 212 (802)
T 4hg6_A 190 ----------------PDPELAQKAQE---RRRE----LQQLCREL---------------------------------- 212 (802)
T ss_dssp ----------------SSHHHHHHHHH---HHHH----HHHHHHHH----------------------------------
T ss_pred ----------------CCHHHHHHHHh---hhHH----HHHHHHhc----------------------------------
Confidence 11222222211 1122 22232210
Q ss_pred CCCCCCCCCCcCcEEEEecccCCCCCCCCchhhhHHHHHHhcCCCCCCEEEEecCCCCCCchHHHHHHHHhh-cCCCCCC
Q 039060 486 SGGHDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSGVLTNAPFMLNLDCDHYVNNSKAVRESMCFL-MDPQTGR 564 (1040)
Q Consensus 486 ~g~~d~~~~~lP~lvYvsRekRpg~~hh~KAGALNallrvSav~tngp~Il~lDcD~~~~~p~~Lr~amcff-~Dp~~g~ 564 (1040)
++.|+.|++ ++++||||+|.+++. ++++||+++|||++ +.|++|++++.+| .||
T Consensus 213 ------------~v~~i~~~~----~~~GKa~alN~gl~~----a~gd~Il~lDaD~~-~~pd~L~~lv~~~~~dp---- 267 (802)
T 4hg6_A 213 ------------GVVYSTRER----NEHAKAGNMSAALER----LKGELVVVFDADHV-PSRDFLARTVGYFVEDP---- 267 (802)
T ss_dssp ------------TCEEEECSS----CCSHHHHHHHHHHHH----CCCSEEEECCTTEE-ECTTHHHHHHHHHHHSS----
T ss_pred ------------CcEEEEecC----CCCcchHHHHHHHHh----cCCCEEEEECCCCC-cChHHHHHHHHHHhcCC----
Confidence 268899887 677899999999997 68999999999999 5899999999998 588
Q ss_pred ceEEEecCccccCCCch-------hhhhhhhhhhhhhhccccccCCCccccccccchhhhhhcCCCCCCCCCCCCCccCC
Q 039060 565 KVCYVQFPQRFDGIDRH-------DRYANRNTVFFDINMRGLDGIQGPVYVGTGCVFRRQALYGYEPPKGPKRPKMVSCD 637 (1040)
Q Consensus 565 ~va~VQ~PQ~F~nid~~-------D~y~n~~~vFfdi~~~gldg~qgp~yvGTGcvfRR~ALyG~~p~~~~~~~~~~~~~ 637 (1040)
++++||+|+.+.|.++. .++.+++..||....++.+.+++++++|++++|||+++
T Consensus 268 ~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al------------------ 329 (802)
T 4hg6_A 268 DLFLVQTPHFFINPDPIQRNLALGDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRAL------------------ 329 (802)
T ss_dssp SCCEEECCCCBSSCCHHHHHHTCCTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHH------------------
T ss_pred CeEEEeccEEEeCCchHhhhhhHHhhhhHHHHHHHHHHHhhHhhcCCceecccchhhhHHHH------------------
Confidence 88999999999997743 33456678899999999999999999999999999887
Q ss_pred CCCCCCcccccccccccCCccccCCCCChhhHHHhhhhhHhhhcCcchHHHhhhhhhhCCCCCCCCchhHHHHHHHhccc
Q 039060 638 CCPCFGRRKKKYSKHSANGENANLGGMDDDKELLMSQMNFEKKFGQSAIFVTSTLMEQGGVPPSSSPASLLKEAIHVISC 717 (1040)
Q Consensus 638 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~~~~~~~~~~~~~a~~v~sC 717 (1040)
+++||+++
T Consensus 330 -------------------------------------------------------~~vGgf~~----------------- 337 (802)
T 4hg6_A 330 -------------------------------------------------------DEAGGFAG----------------- 337 (802)
T ss_dssp -------------------------------------------------------HHHTTCCC-----------------
T ss_pred -------------------------------------------------------HHcCCcCC-----------------
Confidence 45677654
Q ss_pred cccccCccccccCcccccccchHHHHHHHHhCCcEEEEeCCCcccccccCCCCHHHHHHHHHHhhccchhHHhhcCCccc
Q 039060 718 GYEDKTEWGLELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRAAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPVW 797 (1040)
Q Consensus 718 ~YE~~T~WG~evGW~ygsvTED~~tg~rLh~~GWrsvY~~~~~~af~G~aP~tl~~~l~QR~RWA~G~lQil~sk~~PL~ 797 (1040)
++++||.+++++++++||+++|+++.. +++.+|+|+.++++||.||++|.+|+++.+ +|++
T Consensus 338 ----------------~~~~ED~~l~~rl~~~G~ri~~~~~~~--~~~~~p~t~~~~~~Qr~RW~~G~~q~l~~~-~pl~ 398 (802)
T 4hg6_A 338 ----------------ETITEDAETALEIHSRGWKSLYIDRAM--IAGLQPETFASFIQQRGRWATGMMQMLLLK-NPLF 398 (802)
T ss_dssp ----------------SSSSHHHHHHHHHHTTTCCEEECCCCC--EEECCCCSHHHHHHHHHHHHHHHHHHHHHS-CTTS
T ss_pred ----------------CCcchHHHHHHHHHHcCCeEEEecCCE--EEecCCCCHHHHHHHHHHHHccHHHHHHHh-Cccc
Confidence 578899999999999999999997644 589999999999999999999999999854 6776
Q ss_pred ccccCCCCCccchhhhhhhhhhhhhHHHHHHHHHHHHHHHHhCCCccccchhHHHHHHHHHHH-HHHHHHHHHhhhcCcc
Q 039060 798 YGYKGGNLRFLERFAYVNTTIYPFTSIPLLAYCVLPAICLLTDKFIMPEISTFASLFFIALFI-SIFTTGILELRWSGVS 876 (1040)
Q Consensus 798 ~g~~~~~L~l~QRL~Yl~~~ly~l~slp~liy~llP~l~Ll~G~~iip~~s~~~~~~fi~lfl-s~~~~~lLe~rwsG~s 876 (1040)
.+++++.||+.|+...++++.+++.++++++|+++++++..+++.....++.+++.+++ .+.+...+ +.+..
T Consensus 399 ----~~~l~~~~rl~~l~~~~~~~~~~~~li~ll~p~~~ll~~~~~~~~~~~~~~~~~lp~~l~~~~~~~~~---~~~~r 471 (802)
T 4hg6_A 399 ----RRGLGIAQRLCYLNSMSFWFFPLVRMMFLVAPLIYLFFGIEIFVATFEEVLAYMPGYLAVSFLVQNAL---FARQR 471 (802)
T ss_dssp ----CSSCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHCCCCSCCCHHHHHHHHHHHHHHHHHHHHHH---HTTTS
T ss_pred ----cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHHHHHH---hcCcH
Confidence 45799999999999999999999999999999999999998876543332222222221 22222221 11111
Q ss_pred chhhhcccchhhHHHHHHHHHHHHHHHHH-HHcCCCCCeEeccCCCCccccccceeeeccccchHHHHHHHHHHHHHHHH
Q 039060 877 IEEWWRNEQFWVIGGISAHLFAVVQGLLK-ILAGIDTNFTVTSKATDEDEEFGELYSFKWTTLLIPPTTVLIINLVGVVA 955 (1040)
Q Consensus 877 i~~wWrne~~W~I~~~sa~lfav~~allk-vL~g~~~~F~VTpK~~~~~~~~~~ly~f~ws~L~iP~~tLlllnliaiv~ 955 (1040)
..|| ++.|+.+.+ +..+.+++. .+++++.+|+||+|+...+..+ + + .++.|+++++++|++++++
T Consensus 472 -~~~~-~~l~~~~~~-----~~~~~a~l~~l~~~~~~~f~VT~Kg~~~~~~~-----~-~-~~~~p~~~~~~l~~~~~~~ 537 (802)
T 4hg6_A 472 -WPLV-SEVYEVAQA-----PYLARAIVTTLLRPRSARFAVTAKDETLSENY-----I-S-PIYRPLLFTFLLCLSGVLA 537 (802)
T ss_dssp -CTTH-HHHHHHHHH-----HHHHHHHHHHHHSTTCCCCCCCCCCCCCSSCC-----B-C-TTCHHHHHHHHHHHHHHHH
T ss_pred -HHHH-HHHHHHHHH-----HHHHHHHHHHHhCCCCCcceECCCCccccccc-----h-h-hHHHHHHHHHHHHHHHHHH
Confidence 1233 233332221 112344443 3456889999999998643322 1 2 4788999999999999999
Q ss_pred HHHHhHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHhh
Q 039060 956 GISDAINNGYQSWGPLFGKLFFAFWVILHLYPFLKGLM 993 (1040)
Q Consensus 956 Gi~~~i~~g~~~w~~l~g~l~~~~Wvi~~l~Pfl~gL~ 993 (1040)
|+++...... +..+.+++++|+++|++.+.-++.
T Consensus 538 ~~~~~~~~~~----~~~~~~~~~~w~~~~l~~l~~~~~ 571 (802)
T 4hg6_A 538 TLVRWVAFPG----DRSVLLVVGGWAVLNVLLVGFALR 571 (802)
T ss_dssp HHHHHHHCGG----GHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhccCC----ccchhhhhhHHHHHHHHHHHHHHH
Confidence 9998875432 356678999999999999888773
|
| >1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1 | Back alignment and structure |
|---|
| >2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* | Back alignment and structure |
|---|
| >1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 | Back alignment and structure |
|---|
| >3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis} | Back alignment and structure |
|---|
| >2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* | Back alignment and structure |
|---|
| >1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* | Back alignment and structure |
|---|
| >2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* | Back alignment and structure |
|---|
| >2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* | Back alignment and structure |
|---|
| >3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A | Back alignment and structure |
|---|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* | Back alignment and structure |
|---|
| >4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* | Back alignment and structure |
|---|
| >2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ... | Back alignment and structure |
|---|
| >3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A* | Back alignment and structure |
|---|
| >2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A* | Back alignment and structure |
|---|
| >1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A* | Back alignment and structure |
|---|
| >2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A* | Back alignment and structure |
|---|
| >1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B | Back alignment and structure |
|---|
| >2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A* | Back alignment and structure |
|---|
| >2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A* | Back alignment and structure |
|---|
| >1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3 | Back alignment and structure |
|---|
| >2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1 | Back alignment and structure |
|---|
| >2csz_A Synaptotagmin-like protein 4; exophilin 2, granuphilin, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2 | Back alignment and structure |
|---|
| >2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} | Back alignment and structure |
|---|
| >2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens} | Back alignment and structure |
|---|
| >2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B | Back alignment and structure |
|---|
| >1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1 | Back alignment and structure |
|---|
| >2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A | Back alignment and structure |
|---|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 | Back alignment and structure |
|---|
| >3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
| >2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1040 | ||||
| d1weoa_ | 93 | g.44.1.1 (A:) Cellulose synthase A catalytic subun | 2e-52 | |
| d1g25a_ | 65 | g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapi | 1e-05 | |
| d1vfya_ | 67 | g.50.1.1 (A:) vps27p protein {Baker's yeast (Sacch | 0.004 |
| >d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 93 | Back information, alignment and structure |
|---|
class: Small proteins fold: RING/U-box superfamily: RING/U-box family: RING finger domain, C3HC4 domain: Cellulose synthase A catalytic subunit 7, IRX3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 175 bits (446), Expect = 2e-52
Identities = 73/84 (86%), Positives = 76/84 (90%)
Query: 23 HEEPKPLKNLDAQVCEICGDEIGLTVDGDLFVACNECGFPVCRPCYEYERREGTQVCPQC 82
PKPLKNLD Q CEICGD+IGLTV+GDLFVACNECGFP CRPCYEYERREGTQ CPQC
Sbjct: 5 SSGPKPLKNLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQC 64
Query: 83 KTRYKRLKGSPRVEGDEDEEDIDD 106
KTRYKRL+GSPRVEGDEDEEDID
Sbjct: 65 KTRYKRLRGSPRVEGDEDEEDIDS 88
|
| >d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]} Length = 65 | Back information, alignment and structure |
|---|
| >d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 67 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1040 | |||
| d1weoa_ | 93 | Cellulose synthase A catalytic subunit 7, IRX3 {Th | 100.0 | |
| d1xhba2 | 328 | Polypeptide N-acetylgalactosaminyltransferase 1, N | 99.59 | |
| d1qg8a_ | 255 | Spore coat polysaccharide biosynthesis protein Sps | 99.25 | |
| d1omza_ | 265 | Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga | 98.89 | |
| d2bo4a1 | 381 | Mannosylglycerate synthase, MGS {Rhodothermus mari | 96.18 | |
| d1ur6b_ | 52 | Not-4 N-terminal RING finger domain {Human (Homo s | 95.99 | |
| d1g25a_ | 65 | TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9 | 95.46 | |
| d1vyxa_ | 60 | IE1B protein (ORF K3), N-terminal domain {Kaposi's | 94.27 | |
| d1chca_ | 68 | Immediate early protein, IEEHV {Equine herpesvirus | 90.75 | |
| d1rmda2 | 86 | V(D)J recombination activating protein 1 (RAG1), d | 80.31 |
| >d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Small proteins fold: RING/U-box superfamily: RING/U-box family: RING finger domain, C3HC4 domain: Cellulose synthase A catalytic subunit 7, IRX3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=2.8e-45 Score=322.67 Aligned_cols=83 Identities=88% Similarity=1.615 Sum_probs=80.3
Q ss_pred CCCCCCCCCCCcccccccccccccCCCCeeecCCCCCCCcccchhHHHHhhCCCCCCCChhhhhcccCCCCCCCCCCccc
Q 039060 24 EEPKPLKNLDAQVCEICGDEIGLTVDGDLFVACNECGFPVCRPCYEYERREGTQVCPQCKTRYKRLKGSPRVEGDEDEED 103 (1040)
Q Consensus 24 ~~~~~~~~~~~~~c~iCg~~vg~~~~G~~fvaC~eC~FpvCRpCyeyerkeG~~~CpqCkt~Ykr~kg~p~v~gd~~e~~ 103 (1040)
..+||++++++|+||||||+||+++|||+|||||||+|||||||||||||||||+|||||||||||||||||+||++||+
T Consensus 6 ~g~kp~~~~~~q~CqiCGd~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCkt~Ykr~kgsprv~gDe~e~~ 85 (93)
T d1weoa_ 6 SGPKPLKNLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYKRLRGSPRVEGDEDEED 85 (93)
T ss_dssp SSSSCCSCCSSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCCCCTTCCCCTTSCCCCC
T ss_pred CCCCChhhcccchhhhcccccccCCCCCEEEEecccCCccchHHHHHHHhccCccCcccCChhhhhcCCCCCCCCccccc
Confidence 34799999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccc
Q 039060 104 IDD 106 (1040)
Q Consensus 104 ~~d 106 (1040)
+||
T Consensus 86 ~d~ 88 (93)
T d1weoa_ 86 IDS 88 (93)
T ss_dssp SCC
T ss_pred ccc
Confidence 886
|
| >d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
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| >d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} | Back information, alignment and structure |
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| >d1ur6b_ g.44.1.1 (B:) Not-4 N-terminal RING finger domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain {Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8 [TaxId: 37296]} | Back information, alignment and structure |
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| >d1chca_ g.44.1.1 (A:) Immediate early protein, IEEHV {Equine herpesvirus 1 [TaxId: 10326]} | Back information, alignment and structure |
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| >d1rmda2 g.44.1.1 (A:1-86) V(D)J recombination activating protein 1 (RAG1), dimerization domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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