Citrus Sinensis ID: 039165
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 956 | ||||||
| 225433442 | 978 | PREDICTED: non-lysosomal glucosylceramid | 0.998 | 0.976 | 0.830 | 0.0 | |
| 255554158 | 968 | conserved hypothetical protein [Ricinus | 1.0 | 0.987 | 0.826 | 0.0 | |
| 224072655 | 966 | predicted protein [Populus trichocarpa] | 0.988 | 0.978 | 0.814 | 0.0 | |
| 356576421 | 950 | PREDICTED: non-lysosomal glucosylceramid | 0.988 | 0.994 | 0.802 | 0.0 | |
| 449442371 | 993 | PREDICTED: non-lysosomal glucosylceramid | 1.0 | 0.962 | 0.784 | 0.0 | |
| 356535470 | 949 | PREDICTED: non-lysosomal glucosylceramid | 0.987 | 0.994 | 0.792 | 0.0 | |
| 357440847 | 992 | Non-lysosomal glucosylceramidase [Medica | 1.0 | 0.963 | 0.782 | 0.0 | |
| 297831192 | 950 | hypothetical protein ARALYDRAFT_479911 [ | 0.990 | 0.996 | 0.777 | 0.0 | |
| 22331303 | 950 | Beta-glucosidase, GBA2 type family prote | 0.990 | 0.996 | 0.783 | 0.0 | |
| 11994237 | 937 | unnamed protein product [Arabidopsis tha | 0.976 | 0.996 | 0.770 | 0.0 |
| >gi|225433442|ref|XP_002285674.1| PREDICTED: non-lysosomal glucosylceramidase-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1644 bits (4256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 813/979 (83%), Positives = 875/979 (89%), Gaps = 24/979 (2%)
Query: 1 MVSGNLFHCRKHSWPPEEYVGRATLQLLDFDSAAPPEQAWRRRLNSHANILKEFSVTFME 60
MVSGN+FHCRKHSWPPEEY+ R TL LLDFDSAAPPEQAWRRRLNSHANILKEFSVTF E
Sbjct: 1 MVSGNIFHCRKHSWPPEEYINRTTLHLLDFDSAAPPEQAWRRRLNSHANILKEFSVTFTE 60
Query: 61 AIKMVRLGIRLWSYVREEASHGRKAPIDPFTRISCKPSASQGVPLGGMGSGSISRGFRGE 120
AIKM+RLGIRLWSY+REEAS GRKAPIDPFTR +CKPSASQGVPLGGMGSGSISRGFRGE
Sbjct: 61 AIKMIRLGIRLWSYIREEASQGRKAPIDPFTRETCKPSASQGVPLGGMGSGSISRGFRGE 120
Query: 121 FRQWQIVPGTCEPSPVMANQFSIFISRDGGNKHYASVLAPGQHEGLGKAGDQGIDSWGWN 180
FR WQIVPGTC+ SP+MANQFSIFISR+GGNK YASVLAPGQHEGLGK+GDQGI SWGWN
Sbjct: 121 FRHWQIVPGTCDASPIMANQFSIFISREGGNKKYASVLAPGQHEGLGKSGDQGISSWGWN 180
Query: 181 LSGQHSTYHALFPRAWTIYDGEPDPELKISCRQISPFIPHNYRDSSLPTAVFVYTLVNTG 240
LSGQHSTYHALFPRAWTIYDGEPDPELK+SCRQISPFIPHNYRDSSLPTAVFVYTLVNTG
Sbjct: 181 LSGQHSTYHALFPRAWTIYDGEPDPELKVSCRQISPFIPHNYRDSSLPTAVFVYTLVNTG 240
Query: 241 KDRAKVSLLFTWANSIGGISHLSGDHVNEPFLGDDGVSGVLLHHKTARGNPPVTFAVAAC 300
K+RAKVSLLFTWANSIGGISHLSGDHVNEPF+G+DGVSGVLLHHKTA+ NPPVTFA+AAC
Sbjct: 241 KERAKVSLLFTWANSIGGISHLSGDHVNEPFIGEDGVSGVLLHHKTAKENPPVTFAIAAC 300
Query: 301 ETQNVNVTVLPCFGLSEGSCVTAKGMWGTMVQDGQFDRENFKSGPSMPSSPGEALCAAVS 360
ETQNV+VTVLP FGLSEGS +TAK MWG MVQDGQFDREN SG SMPSSPGE LCAAVS
Sbjct: 301 ETQNVSVTVLPSFGLSEGSHITAKDMWGKMVQDGQFDRENCYSGRSMPSSPGETLCAAVS 360
Query: 361 ASAWVEPHGKCTVAFALAWSSPKVKFLKGSSYHRRYTKFYGTSEGVAQDLVHDALMNYKR 420
ASAWVEPHGKCTVAFALAWSSPKVKFLKGSSYHRRYTK+YGTSE A ++VHDAL NYK+
Sbjct: 361 ASAWVEPHGKCTVAFALAWSSPKVKFLKGSSYHRRYTKYYGTSERAALNIVHDALTNYKQ 420
Query: 421 WEEDIEKWQNPILRDDRLPEWYKFTLFNELYFLVAGGTVWIDSRLPAPDKRN--HRNG-- 476
WEE+IEKWQ+PILRDDRLPEWYKFTLFNELYFLVAGGTVWIDS LPA +N H++
Sbjct: 421 WEEEIEKWQSPILRDDRLPEWYKFTLFNELYFLVAGGTVWIDSSLPATSSKNSLHQSAAV 480
Query: 477 EKTDVKGTEAEVNLSDGALVKYTTTSDY---------YSEDE----------SVVNHEGS 517
E T+V T A+ N GA V+ + T Y Y E+E V+ E S
Sbjct: 481 ENTNVNVTVAKGNSRRGAAVENSVTDGYDAISRKGLEYDEEEIHTRNTCEEKPVIPQE-S 539
Query: 518 NSYSQHHPITLLNEENDSDDGGRFLYLEGVEYVMWCTYDVHFYASFALLELFPKIELNIQ 577
NS+ H TL + ++++DD GRFLYLEGVEY+MWCTYDVHFYASFALLELFPKIEL+IQ
Sbjct: 540 NSHHSIHKDTLKDPQDETDDVGRFLYLEGVEYIMWCTYDVHFYASFALLELFPKIELSIQ 599
Query: 578 RDFAKAVLSEDGRKVKFLAEGNTGIRKLRGAVPHDLGTHDPWNEMNAYNIHDTSQWKDLN 637
R+FAKAVLSEDGR+VKFLAEGN GIRK+RGAVPHDLGTHDPW+EMNAYNIHDTSQWKDLN
Sbjct: 600 REFAKAVLSEDGRRVKFLAEGNWGIRKVRGAVPHDLGTHDPWHEMNAYNIHDTSQWKDLN 659
Query: 638 PKFVLQVYRDFAATGDMSFGVDVWPAVRAAMEYMEQFDRDGDCLIENDGFPDQTYDTWTV 697
PKFVLQVYRDFAAT D SFG DVWPAVRAAMEYMEQFDRD D LIENDGFPDQTYDTWTV
Sbjct: 660 PKFVLQVYRDFAATRDFSFGADVWPAVRAAMEYMEQFDRDSDGLIENDGFPDQTYDTWTV 719
Query: 698 HGVSAYCGCLWLAALQAAAAMALQLGDKPFAEYCKGKFLKAKSVFEEKLWNGSYFNYDSG 757
HG+SAYCGCLWLAALQAAAAMALQLGDKPFAE CK KF KAK VFEEKLWNGSYFNYDSG
Sbjct: 720 HGISAYCGCLWLAALQAAAAMALQLGDKPFAEKCKSKFFKAKLVFEEKLWNGSYFNYDSG 779
Query: 758 SSSNSKSIQTDQLAGQWYTASSGLPSLFDEAQIKSTLQKIFDFNVMKVKGGRMGAVNGMH 817
SSSNSKSIQ DQLAGQWYTASSGLPSLFD+ +IKS+L KI+DFNVMKVKGG+MGAVNGMH
Sbjct: 780 SSSNSKSIQADQLAGQWYTASSGLPSLFDDYKIKSSLHKIYDFNVMKVKGGKMGAVNGMH 839
Query: 818 PNGKVDETCMQSREIWTGVTYGVAATMILAGMEKEAFTTAEGIFTAGWSEEGYGYWFQTP 877
PNGKVDE+CMQSREIWTGVTYGVAATMIL+GME++AFTTAEGIFTAGWSEEGYGYWFQTP
Sbjct: 840 PNGKVDESCMQSREIWTGVTYGVAATMILSGMEEQAFTTAEGIFTAGWSEEGYGYWFQTP 899
Query: 878 EAWTMDGHFRSLIYMRPLSIWGMQWALSMPKTVLQAPEINIMDRISISPSAAAISHEFGV 937
E WT+DGHFRSLIYMRPL+IWGMQWALSMP+ +L AP IN M+RI +SP A + HE GV
Sbjct: 900 EGWTIDGHFRSLIYMRPLAIWGMQWALSMPRAILDAPTINFMERIHVSPHNARLPHETGV 959
Query: 938 RKITNKAKCFGAAVFHCSC 956
RKI KAKCFG +VFHCSC
Sbjct: 960 RKIATKAKCFGNSVFHCSC 978
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255554158|ref|XP_002518119.1| conserved hypothetical protein [Ricinus communis] gi|223542715|gb|EEF44252.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|224072655|ref|XP_002303825.1| predicted protein [Populus trichocarpa] gi|222841257|gb|EEE78804.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|356576421|ref|XP_003556330.1| PREDICTED: non-lysosomal glucosylceramidase-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|449442371|ref|XP_004138955.1| PREDICTED: non-lysosomal glucosylceramidase-like [Cucumis sativus] gi|449520930|ref|XP_004167485.1| PREDICTED: non-lysosomal glucosylceramidase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|356535470|ref|XP_003536268.1| PREDICTED: non-lysosomal glucosylceramidase-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|357440847|ref|XP_003590701.1| Non-lysosomal glucosylceramidase [Medicago truncatula] gi|355479749|gb|AES60952.1| Non-lysosomal glucosylceramidase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|297831192|ref|XP_002883478.1| hypothetical protein ARALYDRAFT_479911 [Arabidopsis lyrata subsp. lyrata] gi|297329318|gb|EFH59737.1| hypothetical protein ARALYDRAFT_479911 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|22331303|ref|NP_189060.2| Beta-glucosidase, GBA2 type family protein [Arabidopsis thaliana] gi|79313355|ref|NP_001030757.1| Beta-glucosidase, GBA2 type family protein [Arabidopsis thaliana] gi|17529232|gb|AAL38843.1| unknown protein [Arabidopsis thaliana] gi|110742225|dbj|BAE99039.1| hypothetical protein [Arabidopsis thaliana] gi|332643347|gb|AEE76868.1| Beta-glucosidase, GBA2 type family protein [Arabidopsis thaliana] gi|332643348|gb|AEE76869.1| Beta-glucosidase, GBA2 type family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|11994237|dbj|BAB01359.1| unnamed protein product [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 956 | ||||||
| TAIR|locus:2093701 | 950 | AT3G24180 [Arabidopsis thalian | 0.991 | 0.997 | 0.748 | 0.0 | |
| TAIR|locus:2158819 | 957 | AT5G49900 [Arabidopsis thalian | 0.905 | 0.904 | 0.511 | 4.1e-239 | |
| TAIR|locus:2012708 | 947 | AT1G33700 [Arabidopsis thalian | 0.900 | 0.909 | 0.474 | 4.6e-224 | |
| TAIR|locus:2140588 | 922 | AT4G10060 [Arabidopsis thalian | 0.459 | 0.476 | 0.476 | 5.7e-224 | |
| ZFIN|ZDB-GENE-070522-3 | 851 | gba2 "glucosidase, beta (bile | 0.383 | 0.431 | 0.464 | 3.1e-164 | |
| MGI|MGI:2654325 | 918 | Gba2 "glucosidase beta 2" [Mus | 0.382 | 0.398 | 0.470 | 6.6e-162 | |
| RGD|1305598 | 912 | Gba2 "glucosidase beta 2" [Rat | 0.382 | 0.401 | 0.459 | 6.6e-162 | |
| UNIPROTKB|Q5M868 | 912 | Gba2 "Non-lysosomal glucosylce | 0.382 | 0.401 | 0.459 | 6.6e-162 | |
| UNIPROTKB|J9P6J8 | 1081 | GBA2 "Uncharacterized protein" | 0.380 | 0.336 | 0.470 | 1.1e-161 | |
| DICTYBASE|DDB_G0292446 | 1302 | DDB_G0292446 "Non-lysosomal gl | 0.421 | 0.309 | 0.406 | 1.4e-161 |
| TAIR|locus:2093701 AT3G24180 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3864 (1365.3 bits), Expect = 0., P = 0.
Identities = 717/958 (74%), Positives = 786/958 (82%)
Query: 1 MVSGNLFHCRKHSWPPEEYVGRATLQLLDFDSAAPPEQAWRRRLNSHANILKEFSVTFME 60
MV LFH RKHSWP EE++ R+TLQLLDFDSAAPP AWRRRLN HANILKEF++TF E
Sbjct: 1 MVGATLFHRRKHSWPTEEFISRSTLQLLDFDSAAPPPHAWRRRLNCHANILKEFTITFRE 60
Query: 61 AIKMVRLGIRLWSYVREEASHGRKAPIDPFTRISCKPSASQGVPLGGMGSGSISRGFRGE 120
AIKMVRLGIRLWSYVREEASHGRKAPIDPFT+ +CKPSASQGVPLGGMGSGSISRGFRGE
Sbjct: 61 AIKMVRLGIRLWSYVREEASHGRKAPIDPFTKENCKPSASQGVPLGGMGSGSISRGFRGE 120
Query: 121 FRQWQIVPGTCEPSPVMANQFSIFISRDGGNKHYASVLAPGQHEGLGKAGDQGIDSWGWN 180
F+QWQI PGTC+PSP+M+NQFSIFISRDGG+K YASVL+PGQH LGK+ D+G+ SWGWN
Sbjct: 121 FKQWQITPGTCDPSPMMSNQFSIFISRDGGHKKYASVLSPGQHGSLGKSRDKGLSSWGWN 180
Query: 181 LSGQHSTYHALFPRAWTIYDGEPDPELKISCRQISPFIPHNYRDSSLPTAVFVYTLVNTG 240
L+GQHSTYHALFPRAWTIYDGEPDPELKISCRQISPFIP+NYRDSSLP AVFVYTLVNTG
Sbjct: 181 LNGQHSTYHALFPRAWTIYDGEPDPELKISCRQISPFIPNNYRDSSLPAAVFVYTLVNTG 240
Query: 241 KDRAKVSLLFTWANSIGGISHLSGDHVNEPFLGDDGVSGVLLHHKTARGNPPVTFAVAAC 300
K+RAKVSLLFTWANS+GG SH+SG HVNEPF+G+DGVSGVLLHHKT +GNPPVTFA+AA
Sbjct: 241 KERAKVSLLFTWANSMGGTSHMSGGHVNEPFIGEDGVSGVLLHHKTGKGNPPVTFAIAAS 300
Query: 301 ETQNVNVTVLPCFGLSEGSCVTAKGMWGTMVQDGQFDRENFKSGPSMPSSPGEALCAAVS 360
ETQNVNVTVLPCFGLSE S TAK MW TM QDG+FD+ENF SGPS PS G+ +CAAVS
Sbjct: 301 ETQNVNVTVLPCFGLSEDSSFTAKDMWDTMEQDGKFDQENFNSGPSTPSLAGDTICAAVS 360
Query: 361 ASAWVEPHGKCTVAFALAWSSPKVKFLKGSSYHRRYTKFYGTSEGVAQDLVHDALMNYKR 420
ASAWVE HGKCTV+FAL+WSSPKVKF KGS+Y RRYTKFYGTS A DLVHDAL NYKR
Sbjct: 361 ASAWVEAHGKCTVSFALSWSSPKVKFSKGSTYDRRYTKFYGTSPRAALDLVHDALTNYKR 420
Query: 421 WEEDIEKWQNPILRDDRLPEWYKFTLFNELYFLVAGGTVWIDSR-LPAPDKRNHRNGEKT 479
WEEDIE WQNPILRD+RLPEWYKFTLFNELYFLVAGGTVWIDS L A H+
Sbjct: 421 WEEDIEAWQNPILRDERLPEWYKFTLFNELYFLVAGGTVWIDSSSLNANGNSQHQQSGLG 480
Query: 480 DVKGTEAEVNLSDGALVKYTTTS-DYYSEDESVVNHEGSNSYSQHHPITLLNEENDSDDG 538
+ G ++++D S S DE H + + + +D DD
Sbjct: 481 NSDGKVGGLDINDQRNDLGNGNSVGVKSNDEVSAIHNRNGLFVDTPHV------DDGDDV 534
Query: 539 GRFLYLEGVEYVMWCTYDVHFYASFALLELFPKIELNIQRDFAKAVLSEDGRKVKFLAEG 598
GRFLYLEGVEYVMWCTYDVHFYAS+ALL LFPKIELNIQRDFAKAVLSEDGRKVKFLAEG
Sbjct: 535 GRFLYLEGVEYVMWCTYDVHFYASYALLMLFPKIELNIQRDFAKAVLSEDGRKVKFLAEG 594
Query: 599 NTGIRKLRGAVPHDLGTHDPWNEMNAYNIHDTSQWKDLNPKFVLQVYRDFAATGDMSFGV 658
N GIRK+RGAVPHDLG HDPWNEMNAYNIHDTS+WKDLNPKFVLQVYRDFAATGD FG+
Sbjct: 595 NVGIRKVRGAVPHDLGMHDPWNEMNAYNIHDTSRWKDLNPKFVLQVYRDFAATGDYQFGI 654
Query: 659 DVWPAVRAAMEYMEQFDRDGDCLIENDGFPDQTYDTWTVHGVSAYCGCXXXXXXXXXXXX 718
DVWPAVRAAMEYMEQFDRD D LIENDGFPDQTYDTWTVHGVSAYCGC
Sbjct: 655 DVWPAVRAAMEYMEQFDRDNDDLIENDGFPDQTYDTWTVHGVSAYCGCLWLAALQAAAAM 714
Query: 719 XXXXGDKPFAEYCKGKFLKAKSVFEEKLWXXXXXXXXXXXXXXXXXIQTDQLAGQWYTAS 778
GDK FAE CK KFL AK+ E KLW IQTDQLAGQWY AS
Sbjct: 715 ALQIGDKFFAELCKNKFLNAKAALETKLWNGSYFNYDSGSSSNSKSIQTDQLAGQWYAAS 774
Query: 779 SGLPSLFDEAQIKSTLQKIFDFNVMKVKGGRMGAVNGMHPNGKVDETCMQSREIWTGVTY 838
SGLP LF+E++I+ST+QKIFDFNVMK KGG+MGAVNGMHP+GKVD+TCMQSREIWTGVTY
Sbjct: 775 SGLPPLFEESKIRSTMQKIFDFNVMKTKGGKMGAVNGMHPDGKVDDTCMQSREIWTGVTY 834
Query: 839 GVAATMILAGMEKEAFTTAEGIFTAGWSEEGYGYWFQTPEAWTMDGHFRSLIYMRPLSIW 898
AATMIL+GME++ FTTAEGIFTAGWSEEG+GYWFQTPE WTMDGH+RSLIYMRPL+IW
Sbjct: 835 AAAATMILSGMEEQGFTTAEGIFTAGWSEEGFGYWFQTPEGWTMDGHYRSLIYMRPLAIW 894
Query: 899 GMQWALSMPKTVLQAPEINIMDRXXXXXXXXXXXHEFGVRKITNKAKCFGAAVFHCSC 956
GMQWALS+PK +L AP+IN+MDR + F V K +KAKCFG + CSC
Sbjct: 895 GMQWALSLPKAILDAPQINMMDRVHLSPRSRRFSNNFKVVK--HKAKCFGNSALSCSC 950
|
|
| TAIR|locus:2158819 AT5G49900 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2012708 AT1G33700 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2140588 AT4G10060 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-070522-3 gba2 "glucosidase, beta (bile acid) 2" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:2654325 Gba2 "glucosidase beta 2" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| RGD|1305598 Gba2 "glucosidase beta 2" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q5M868 Gba2 "Non-lysosomal glucosylceramidase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|J9P6J8 GBA2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0292446 DDB_G0292446 "Non-lysosomal glucosylceramidase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 956 | |||
| pfam04685 | 357 | pfam04685, DUF608, Protein of unknown function, DU | 1e-173 | |
| COG4354 | 721 | COG4354, COG4354, Predicted bile acid beta-glucosi | 8e-77 | |
| pfam12215 | 311 | pfam12215, GBA2_N, beta-Glucocerebrosidase 2 N ter | 3e-62 | |
| COG4354 | 721 | COG4354, COG4354, Predicted bile acid beta-glucosi | 1e-28 | |
| TIGR01561 | 575 | TIGR01561, gde_arch, glycogen debranching enzyme, | 2e-07 | |
| COG3408 | 641 | COG3408, GDB1, Glycogen debranching enzyme [Carboh | 6e-07 | |
| pfam06202 | 367 | pfam06202, GDE_C, Amylo-alpha-1,6-glucosidase | 7e-04 |
| >gnl|CDD|218212 pfam04685, DUF608, Protein of unknown function, DUF608 | Back alignment and domain information |
|---|
Score = 506 bits (1306), Expect = e-173
Identities = 181/368 (49%), Positives = 228/368 (61%), Gaps = 15/368 (4%)
Query: 539 GRFLYLEGVEYVMWCTYDVHFYASFALLELFPKIELNIQRDFAKAVLSEDGRKVKFLAEG 598
GRF YLEG EY M+ T DV FY SFALL LFP++E +++RDFA+A+ +D
Sbjct: 1 GRFAYLEGPEYRMYNTIDVTFYYSFALLLLFPELERSLRRDFARAIQDDDNTTRIIG--- 57
Query: 599 NTGIRKLRGAVPHDLGTH--DPWNEMNAYNIHDTSQWKDLNPKFVLQVYRDFAATGDMSF 656
+GA+PHDLG DPW+ NAY HDT +WKDLN FVLQVYRD+ TGD F
Sbjct: 58 -----DGKGAIPHDLGLPIEDPWDRTNAYIYHDTYRWKDLNLGFVLQVYRDYKLTGDKEF 112
Query: 657 GVDVWPAVRAAMEYMEQFDRDGDCLIENDGFPDQTYDTWTVHGVSAYCGCLWLAALQAAA 716
D+WPAV+ AM+Y+ +D+DGD L EN G PDQTYD W ++GVS+YCG LWLAAL+AA
Sbjct: 113 LKDMWPAVKKAMDYLISWDKDGDGLPENSGHPDQTYDDWPLYGVSSYCGSLWLAALRAAI 172
Query: 717 AMALQLGDKPFAEYCKGKFLKAKSVFEEKLWNGSYFN--YDSGSSSNSKSIQTDQLAGQW 774
MA LGD A + KA+ +E KLWNG YF DS S S S DQL GQW
Sbjct: 173 EMAKILGDTEDAARYRELLEKARKAYERKLWNGEYFIQWIDS-SYQYSDSCMADQLLGQW 231
Query: 775 YTASSGLPSLFDEAQIKSTLQKIFDFNVMKVKGGRMGAVNGMHPNGKVDETCMQSREIWT 834
Y GL + DE +IKS L+ I+ +N K G GAVNGM P+G VD +QS E+WT
Sbjct: 232 YARLLGLGDVLDEEKIKSALRSIYKYNFKKFLNGEAGAVNGMWPDGSVDTPSVQSLEVWT 291
Query: 835 GVTYGVAATMILAGMEKEAFTTAEGIFTAGWSEEGYGYWFQTPEAWTMDGHFRSLIYMRP 894
G+ Y +AA MI GM +E A+G++ G + TPEA T +G +R YMRP
Sbjct: 292 GIEYALAAHMIQEGMVEEGLKIAKGVYDRYDGR--LGNPWNTPEAITANGTYRGSHYMRP 349
Query: 895 LSIWGMQW 902
++IW +Q
Sbjct: 350 MAIWAIQL 357
|
This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. Length = 357 |
| >gnl|CDD|226800 COG4354, COG4354, Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|221464 pfam12215, GBA2_N, beta-Glucocerebrosidase 2 N terminal | Back alignment and domain information |
|---|
| >gnl|CDD|226800 COG4354, COG4354, Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|130624 TIGR01561, gde_arch, glycogen debranching enzyme, archaeal type, putative | Back alignment and domain information |
|---|
| >gnl|CDD|225942 COG3408, GDB1, Glycogen debranching enzyme [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|114894 pfam06202, GDE_C, Amylo-alpha-1,6-glucosidase | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 956 | |||
| KOG2119 | 879 | consensus Predicted bile acid beta-glucosidase [Ca | 100.0 | |
| COG4354 | 721 | Predicted bile acid beta-glucosidase [Carbohydrate | 100.0 | |
| PF04685 | 365 | DUF608: Protein of unknown function, DUF608; Inter | 100.0 | |
| PF12215 | 299 | GBA2_N: beta-Glucocerebrosidase 2 N terminal; Inte | 100.0 | |
| PF06202 | 370 | GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR | 99.93 | |
| TIGR01577 | 616 | oligosac_amyl oligosaccharide amylase. The name of | 99.87 | |
| TIGR01561 | 575 | gde_arch glycogen debranching enzyme, archaeal typ | 99.85 | |
| COG3408 | 641 | GDB1 Glycogen debranching enzyme [Carbohydrate tra | 99.85 | |
| PRK10137 | 786 | alpha-glucosidase; Provisional | 99.8 | |
| COG3459 | 1056 | Cellobiose phosphorylase [Carbohydrate transport a | 99.75 | |
| TIGR01531 | 1464 | glyc_debranch glycogen debranching enzymye. glycog | 99.7 | |
| PF03512 | 428 | Glyco_hydro_52: Glycosyl hydrolase family 52; Inte | 99.64 | |
| TIGR01535 | 648 | glucan_glucosid glucan 1,4-alpha-glucosidase. Gluc | 99.64 | |
| PF05592 | 509 | Bac_rhamnosid: Bacterial alpha-L-rhamnosidase; Int | 99.26 | |
| PF01204 | 512 | Trehalase: Trehalase; InterPro: IPR001661 O-Glycos | 99.14 | |
| PRK13271 | 569 | treA trehalase; Provisional | 99.11 | |
| PLN02567 | 554 | alpha,alpha-trehalase | 99.07 | |
| COG3387 | 612 | SGA1 Glucoamylase and related glycosyl hydrolases | 99.02 | |
| PRK13272 | 542 | treA trehalase; Provisional | 99.02 | |
| PLN03005 | 550 | beta-fructofuranosidase | 99.02 | |
| PLN02973 | 571 | beta-fructofuranosidase | 98.92 | |
| PRK13270 | 549 | treF trehalase; Provisional | 98.91 | |
| PLN02703 | 618 | beta-fructofuranosidase | 98.87 | |
| PF12899 | 436 | Glyco_hydro_100: Alkaline and neutral invertase; I | 98.65 | |
| PF03200 | 801 | Glyco_hydro_63: Mannosyl oligosaccharide glucosida | 98.24 | |
| PF00723 | 448 | Glyco_hydro_15: Glycosyl hydrolases family 15; Int | 98.08 | |
| KOG0602 | 600 | consensus Neutral trehalase [Carbohydrate transpor | 97.81 | |
| COG1626 | 558 | TreA Neutral trehalase [Carbohydrate transport and | 97.54 | |
| PF03632 | 370 | Glyco_hydro_65m: Glycosyl hydrolase family 65 cent | 96.0 | |
| PF06824 | 424 | DUF1237: Protein of unknown function (DUF1237); In | 95.89 | |
| PF08760 | 171 | DUF1793: Domain of unknown function (DUF1793); Int | 95.41 | |
| KOG3625 | 1521 | consensus Alpha amylase [Carbohydrate transport an | 94.99 | |
| cd07430 | 260 | GH15_N Glycoside hydrolase family 15, N-terminal d | 94.94 | |
| PRK13807 | 756 | maltose phosphorylase; Provisional | 94.39 | |
| KOG4125 | 682 | consensus Acid trehalase [Carbohydrate transport a | 93.93 | |
| cd00249 | 384 | AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d | 93.24 | |
| KOG2161 | 849 | consensus Glucosidase I [Carbohydrate transport an | 91.44 | |
| COG3538 | 434 | Uncharacterized conserved protein [Function unknow | 91.26 | |
| cd00249 | 384 | AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d | 88.92 | |
| KOG2119 | 879 | consensus Predicted bile acid beta-glucosidase [Ca | 85.12 | |
| COG4225 | 357 | Predicted unsaturated glucuronyl hydrolase involve | 84.52 |
| >KOG2119 consensus Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-231 Score=1929.38 Aligned_cols=858 Identities=57% Similarity=0.992 Sum_probs=803.3
Q ss_pred CCcccccccccCCCCcccccCccchhhccCCCCCCChhhhhccccccccccccccccHHHHHhhhhhhhhhhhhhHHHhh
Q 039165 1 MVSGNLFHCRKHSWPPEEYVGRATLQLLDFDSAAPPEQAWRRRLNSHANILKEFSVTFMEAIKMVRLGIRLWSYVREEAS 80 (956)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 80 (956)
|+..+++|.|+++||.++. ++|.+.++.+||||++|++ +++|.++++|+|+|+| |+|.|+++|+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~---------~~~~a~~~a~~~rr~~~~~---~r~f~~~~~e~~~l~~---r~~~~~~~e~~ 65 (879)
T KOG2119|consen 1 MLIAQSMTSRKSTMPFEHR---------DLDGAGWKARGWRRPLDSN---PREFFLSIREAIKLVP---RLWLYTREEAW 65 (879)
T ss_pred CccccccccccccCCcccc---------cccccCCcccccccccCCC---CccCchhHHHHhhhhh---hhhhhhhhhhh
Confidence 6778999999999999976 4889999999999999966 9999999999999999 99999999999
Q ss_pred CCCCCCccCCCCCcCCCCCccccccccccccceeecCCcceEEEEEeCCCCCCCccCCCCeEEEEEecCCceeEEeecCC
Q 039165 81 HGRKAPIDPFTRISCKPSASQGVPLGGMGSGSISRGFRGEFRQWQIVPGTCEPSPVMANQFSIFISRDGGNKHYASVLAP 160 (956)
Q Consensus 81 ~~~~~~~d~~~~~~~~~~~~~GvPLGGIG~GsI~r~~~G~f~~w~i~~g~~~~~~~~~~qF~v~~~~~~g~~~~~~vL~~ 160 (956)
+||+.|||+|++.++|. .+||||||||+|+|||+++|+||||||+||+|++.++++|||+++|++++| ++||+||||
T Consensus 66 ~grk~~id~f~k~~~~~--~~gVPlGGiG~GsIgr~frGeF~~f~l~Pgi~e~~~~~~nQF~~~vs~~~g-~iy~svLs~ 142 (879)
T KOG2119|consen 66 NGRKAFIDIFNKENHKS--SHGVPLGGIGCGSIGRDFRGEFQRFQLFPGICEEEPVLANQFIVFVSRPGG-KIYQSVLSP 142 (879)
T ss_pred CCcccceeccccccccc--cccccccccccccccCccCCccceEEecCcccccchhhhceEEEEEEcCCc-eEEEEeecC
Confidence 99999999999999986 699999999999999999999999999999999999999999999998887 999999998
Q ss_pred CCCCCCCCCCCCCCCcCCCCCCCCceeEEeecceeEeeecCCCCCCceEEEEEecccccCCCccCCCceEEEEEEEEeCC
Q 039165 161 GQHEGLGKAGDQGIDSWGWNLSGQHSTYHALFPRAWTIYDGEPDPELKISCRQISPFIPHNYRDSSLPTAVFVYTLVNTG 240 (956)
Q Consensus 161 ~~~~~~~~~~~~~l~~w~~~~~~~~~~y~alyPrawt~Y~~~~~~~v~v~~~q~SP~IP~dykdSSlPvavF~~~v~N~~ 240 (956)
+.|. .+...+.+|++|+|++.+++++|||||||+||+|+++|++ ++|+|||+||||||||+|||||+|+|+|+|+|++
T Consensus 143 ~~~~-c~~~~~~gl~sWd~ni~~~~~~Y~~L~PRsWt~y~~~~~~-l~v~~rqvsp~ip~~y~dsslP~a~fv~~v~N~~ 220 (879)
T KOG2119|consen 143 GDPQ-CGQRPATGLSSWDWNIPGEKSTYHGLFPRSWTEYDGEPDG-LTVVCRQVSPVIPHNYRDSSLPVAVFVFTVENTG 220 (879)
T ss_pred CCcc-cccCCCCCccccccccCCcceeEeeecCceeEEeeccccc-cEEEEeecccccccccccccCcceEEEEEccccc
Confidence 8776 3445678999999999999999999999999999998888 9999999999999999999999999999999999
Q ss_pred CCcEEEEEEEEecccccccccCCCCcccccccCCCCceeEEEeeccCCCCCCceEEEEEeecCCeEEEEecccCCCCCcc
Q 039165 241 KDRAKVSLLFTWANSIGGISHLSGDHVNEPFLGDDGVSGVLLHHKTARGNPPVTFAVAACETQNVNVTVLPCFGLSEGSC 320 (956)
Q Consensus 241 ~~~~~vsi~ft~~N~~G~~~~~~~~~~n~~~~~~~~v~Gv~l~~~~~~~~~p~t~aiaa~~~~~v~vs~~~~f~~~~~~~ 320 (956)
.++++|||+|||+|++|+.+..+++++|++.+..+...|+.+.|. ++.+|+||||||+++++++||+||+|+|+|+
T Consensus 221 ~~e~~vsl~ft~~n~~g~~~~~~~~~~~s~~~~~~~~~~~~~~~~--~~~~P~Tyaiaa~~t~~~~VT~cp~Fdpsg~-- 296 (879)
T KOG2119|consen 221 KEEAEVSLLFTFRNGTGNRSGLSGGHFNSQKIQLKTMVGVSLRTT--NGHMPVTYAIAARETEGVTVTVCPCFDPSGT-- 296 (879)
T ss_pred cceEEEEEEEEEecCCCccccccccccchhhhhhcccccceeecc--CCCCCeeEEeeeeccCCceEEEecccccCCc--
Confidence 999999999999999999999999999999888788889988876 4579999999999999999999999999996
Q ss_pred cchhhHHHHHhhCCCCCCCCCCCCCCCCCCCCCceeeEEEEEEEecCCCeEEEEEEEEeeCCceecc-CCcccccccccc
Q 039165 321 VTAKGMWGTMVQDGQFDRENFKSGPSMPSSPGEALCAAVSASAWVEPHGKCTVAFALAWSSPKVKFL-KGSSYHRRYTKF 399 (956)
Q Consensus 321 ~~~~~~W~~~~~~G~l~~~~~~~~~~~~s~~~~~~~~ava~~~~l~pg~~~tv~F~LaW~~P~~~f~-~g~~~~rrYt~f 399 (956)
+++||++++++|+|++.+ .++.|+.+|+.+|+|||++++|+|+++++++|+|+||||+|+|+ +++.|+||||||
T Consensus 297 --g~~lW~~lkq~G~~d~~~---~~s~ps~~g~~ig~AVc~s~~v~P~~~~~~~FsLsWdmPkv~Fg~~~~ty~RrYTrF 371 (879)
T KOG2119|consen 297 --GKDLWDDLKQNGSLDSLT---SPSEPSKPGDSIGAAVCASVKVPPGGSHTVTFSLSWDMPKVHFGTKERTYHRRYTRF 371 (879)
T ss_pred --HHHHHHHHHhcCCCCCCC---CCCccCCCCCeeeEEEEEeeEeCCCCceeEEEEEEecCcccccccccceeeeeeehh
Confidence 499999999999999864 36789999999999999999999999999999999999999998 699999999999
Q ss_pred cCCCcccHHHHHHHHHHhhHHHHHHHHHhccccccCCCCchhhhhhhhhhhheeecCceeeecCCCCCCCcccCCCCccc
Q 039165 400 YGTSEGVAQDLVHDALMNYKRWEEDIEKWQNPILRDDRLPEWYKFTLFNELYFLVAGGTVWIDSRLPAPDKRNHRNGEKT 479 (956)
Q Consensus 400 f~~~~~~a~~va~~al~~~~~we~~i~~wq~pil~d~~LP~Wyk~alfNelY~l~~Ggt~W~~~~~~~~~~~~~~~~~~~ 479 (956)
|+..|++|.+||||||.||.+||++|++||+|||+|++||+|||+|||||||||+||||+|+++...+ +
T Consensus 372 fg~~g~aa~ai~h~AL~~~~~WE~~IeaWQ~PiL~D~~LPeWYk~alFNELYfi~dGGTvW~e~~~~s-----------l 440 (879)
T KOG2119|consen 372 FGGAGDAAAAICHDALRNYSTWEEKIEAWQSPILNDEKLPEWYKSALFNELYFINDGGTVWFESYDSS-----------L 440 (879)
T ss_pred cCCCcchHHHHHHHHHhchhHHHHHHHHhhccccccccchHHHHHhhhhheEEEecCcEEEEeeecCC-----------c
Confidence 99999999999999999999999999999999999999999999999999999999999999931100 0
Q ss_pred ccccccccccccccccccccccCCCcccccccccccCCCCcCCCCcccccccCCCCCCCCcceeeeccccccccccchhh
Q 039165 480 DVKGTEAEVNLSDGALVKYTTTSDYYSEDESVVNHEGSNSYSQHHPITLLNEENDSDDGGRFLYLEGVEYVMWCTYDVHF 559 (956)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~GrF~~lEG~ey~~~nT~DVh~ 559 (956)
. + +| ++ +... .++..+++|||+||||+||+|||||||||
T Consensus 441 ~--------------~------------eE-~~----~~~~----------~~~~~~~~GrFgYLEg~EYrM~NTYDVHF 479 (879)
T KOG2119|consen 441 G--------------A------------EE-LH----ASHT----------TEDTEKEIGRFGYLEGWEYRMYNTYDVHF 479 (879)
T ss_pred c--------------h------------hh-hc----cccc----------cccchhhccceeeeeeeEEEEEEeeeeee
Confidence 0 0 11 11 1100 12556799999999999999999999999
Q ss_pred HHHHHhhhcChHHHHHHHHHHHHHhccccCcceeeeccCcccccccCCCCCCCCC--CCCCCCcCcccccccCcccccCC
Q 039165 560 YASFALLELFPKIELNIQRDFAKAVLSEDGRKVKFLAEGNTGIRKLRGAVPHDLG--THDPWNEMNAYNIHDTSQWKDLN 637 (956)
Q Consensus 560 YaS~all~LfPeL~rsil~~fa~~~~~~D~~~~~~~~~g~~~~~k~~G~vPhdlG--~~~Pw~~~~~y~~~D~~~WkDln 637 (956)
|+||||+||||+||.++|++||++++++|++.++++++|.++++|++|.||||+| ..+||.++|+|++||+..|||||
T Consensus 480 YaSfALl~LwPklElSiQ~DFa~av~~~d~~~~k~l~~G~~~~rK~~~~VPHDlG~p~~dPW~~~NaY~iHdT~rWKDLN 559 (879)
T KOG2119|consen 480 YASFALLMLWPKLELSIQRDFADAVLREDNTKRKFLSEGEWMTRKVLGAVPHDLGDPDNDPWIETNAYNIHDTGRWKDLN 559 (879)
T ss_pred ehhHHHHHhchhhhhHHHHHHHHHHHhhcCccceeeecCcEEeeeecCcCCcccCCCCcCchhhhceeeeccccchhhcC
Confidence 9999999999999999999999999999999999999999999999999999999 47899999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCCCCccCCcccccchHHHHHHHHHHHHHHHH
Q 039165 638 PKFVLQVYRDFAATGDMSFGVDVWPAVRAAMEYMEQFDRDGDCLIENDGFPDQTYDTWTVHGVSAYCGCLWLAALQAAAA 717 (956)
Q Consensus 638 ~~fVl~vyr~~~~TgD~~fL~~~wp~vk~ale~l~~~D~DgDGLie~~G~~dqTyD~w~~~G~say~~~Lw~aAL~aaa~ 717 (956)
+||||+|||||..|||..||+.+||+|++||+++++||+|+||||||+|++|||||.|.++|+|+||++||+|||++|++
T Consensus 560 ~KFVLqvYRD~~~tgd~~flk~~wpsv~~ime~l~~fDKD~DGmIEN~GfpDQTYD~W~~tGvSAYCGgLWlAALqa~~a 639 (879)
T KOG2119|consen 560 LKFVLQVYRDYVATGDEKFLKAVWPSVYAIMEYLEQFDKDNDGMIENEGFPDQTYDAWSMTGVSAYCGGLWLAALQAASA 639 (879)
T ss_pred ceeEEEEEeeeEEeccHHHHHHHHHHHHHHHHHHHhhcccCCcccccCCCCCccccceEEecchhhhhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCchHHHHHHHHHHHHHHHHHHhCcCCceeEecCCCCCCCcccccccchhhHHHHhcCCCCCCCHHHHHHHHHHH
Q 039165 718 MALQLGDKPFAEYCKGKFLKAKSVFEEKLWNGSYFNYDSGSSSNSKSIQTDQLAGQWYTASSGLPSLFDEAQIKSTLQKI 797 (956)
Q Consensus 718 mA~~LGd~~~A~~~~~~a~~~k~~~~~~lWnG~yy~yD~~~~~~~~si~adQl~Gqw~a~~~GL~~il~~e~~~saL~~V 797 (956)
||+++|+++.+..|+.+++++|++++++||||.||+||..++.++++||+|||+||||+.+|||+++++++++++||++|
T Consensus 640 mA~~~g~~~~~~~f~~klekak~~ye~kLWNGsYfnyD~s~s~~s~sImaDQlaGqWy~~a~gl~~i~~~~~vrsAL~tI 719 (879)
T KOG2119|consen 640 MARQIGDPNTQDYFNNKLEKAKDVYEKKLWNGSYFNYDESSSGSSSSIMADQLAGQWYARACGLPPIFPEEKVRSALDTI 719 (879)
T ss_pred HHHHhCChhHHHHHHHHHHHHHHHHHHhhcCCceeccccCCCCcchhhHHHhHhhHHHHHhcCCCccCchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999987767889999999999999999999999999999999999
Q ss_pred HhhcCccccCCcccccccccCCCCCCCCCCCCCCcchHHHHHHHHHHHHcCChHHHHHHHHHHHHhcccccccCccCCCc
Q 039165 798 FDFNVMKVKGGRMGAVNGMHPNGKVDETCMQSREIWTGVTYGVAATMILAGMEKEAFTTAEGIFTAGWSEEGYGYWFQTP 877 (956)
Q Consensus 798 ~~~nv~~~~~g~~G~vng~~p~G~~d~~s~qs~evW~gvty~vAa~mi~~G~~eeA~~i~~~v~~~~w~~~~~g~~~qtP 877 (956)
|++||+++.+|.+|+||||.|+|++|.+++|++|||+||||+||+.||++|+.++||+++.++|+++|++.|+||+||||
T Consensus 720 y~~NVm~~~~G~~GAVNGm~p~G~VD~ssiQS~EvW~GvtYalAAtMIqeG~~e~~FqTA~G~y~~~w~~~glg~~FqTP 799 (879)
T KOG2119|consen 720 YDFNVMKFKGGRMGAVNGMLPSGKVDTSSIQSREVWAGVTYALAATMIQEGLVEKGFQTASGIYEAIWSETGLGYAFQTP 799 (879)
T ss_pred HhhceeeecCCceeccccccCCCccccccceehhhhccHHHHHHHHHHHHhhHHhhhhhhhhhHHHHhhhcccceEEECc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCcccccccCcchhhHHHHHHhhcCCccccc-CCcccccccccCCcchhhhhcccchhhhhccccccC
Q 039165 878 EAWTMDGHFRSLIYMRPLSIWGMQWALSMPKTVLQ-APEINIMDRISISPSAAAISHEFGVRKITNKAKCFG 948 (956)
Q Consensus 878 E~~~~~g~~rs~~YmRplsiWa~~~Al~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 948 (956)
|+|+.++.|||++||||||||+|||||+++++..+ .|++. +.. .+.++.+|.|++++++--.
T Consensus 800 Ea~~~~~~yRsl~YMRPLsIWamQwaL~~~~~~~~~~~e~~--------~~i-~~~~~~~f~~~s~~~s~~~ 862 (879)
T KOG2119|consen 800 EAWYMEDEYRSLGYMRPLAIWAMQWALTKPQAKPEVVPELA--------PSI-SLQQGKGFGKVSRDLSLLP 862 (879)
T ss_pred hhhhcchhhhhhhhcchhHHHHHHHHHhcccccCCCCcccc--------ccc-hhhcCCCcccHHHhhcCCc
Confidence 99999999999999999999999999999888765 22221 222 5677888888888776544
|
|
| >COG4354 Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF04685 DUF608: Protein of unknown function, DUF608; InterPro: IPR006775 This domain is found in non-lysosomal glucosylceramidases that catalyze the conversion of glucosylceramide to free glucose and ceramide [] | Back alignment and domain information |
|---|
| >PF12215 GBA2_N: beta-Glucocerebrosidase 2 N terminal; InterPro: IPR024462 This entry represents a domain found in beta-glucosidase 2 (also known as beta-glucocerebrosidase 2, acid beta-glucosidase, D-glucosyl-N-acylsphingosine glucohydrolase, or GCase), which is typically between 320 to 354 amino acids in length | Back alignment and domain information |
|---|
| >PF06202 GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR010401 This family includes human glycogen branching enzyme P35573 from SWISSPROT | Back alignment and domain information |
|---|
| >TIGR01577 oligosac_amyl oligosaccharide amylase | Back alignment and domain information |
|---|
| >TIGR01561 gde_arch glycogen debranching enzyme, archaeal type, putative | Back alignment and domain information |
|---|
| >COG3408 GDB1 Glycogen debranching enzyme [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PRK10137 alpha-glucosidase; Provisional | Back alignment and domain information |
|---|
| >COG3459 Cellobiose phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR01531 glyc_debranch glycogen debranching enzymye | Back alignment and domain information |
|---|
| >PF03512 Glyco_hydro_52: Glycosyl hydrolase family 52; InterPro: IPR000852 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >TIGR01535 glucan_glucosid glucan 1,4-alpha-glucosidase | Back alignment and domain information |
|---|
| >PF05592 Bac_rhamnosid: Bacterial alpha-L-rhamnosidase; InterPro: IPR008902 This entry consists of bacterial rhamnosidase A and B enzymes | Back alignment and domain information |
|---|
| >PF01204 Trehalase: Trehalase; InterPro: IPR001661 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PRK13271 treA trehalase; Provisional | Back alignment and domain information |
|---|
| >PLN02567 alpha,alpha-trehalase | Back alignment and domain information |
|---|
| >COG3387 SGA1 Glucoamylase and related glycosyl hydrolases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PRK13272 treA trehalase; Provisional | Back alignment and domain information |
|---|
| >PLN03005 beta-fructofuranosidase | Back alignment and domain information |
|---|
| >PLN02973 beta-fructofuranosidase | Back alignment and domain information |
|---|
| >PRK13270 treF trehalase; Provisional | Back alignment and domain information |
|---|
| >PLN02703 beta-fructofuranosidase | Back alignment and domain information |
|---|
| >PF12899 Glyco_hydro_100: Alkaline and neutral invertase; InterPro: IPR024746 This is a family of endo-alpha-N-acetylgalactosaminidases | Back alignment and domain information |
|---|
| >PF03200 Glyco_hydro_63: Mannosyl oligosaccharide glucosidase; InterPro: IPR004888 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PF00723 Glyco_hydro_15: Glycosyl hydrolases family 15; InterPro: IPR011613 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >KOG0602 consensus Neutral trehalase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >COG1626 TreA Neutral trehalase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF03632 Glyco_hydro_65m: Glycosyl hydrolase family 65 central catalytic domain; InterPro: IPR005195 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PF06824 DUF1237: Protein of unknown function (DUF1237); InterPro: IPR008313 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
| >PF08760 DUF1793: Domain of unknown function (DUF1793); InterPro: IPR014870 This domain is found at the C terminus of a glutaminase protein from fungi [] | Back alignment and domain information |
|---|
| >KOG3625 consensus Alpha amylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >cd07430 GH15_N Glycoside hydrolase family 15, N-terminal domain | Back alignment and domain information |
|---|
| >PRK13807 maltose phosphorylase; Provisional | Back alignment and domain information |
|---|
| >KOG4125 consensus Acid trehalase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid | Back alignment and domain information |
|---|
| >KOG2161 consensus Glucosidase I [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >COG3538 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid | Back alignment and domain information |
|---|
| >KOG2119 consensus Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 956 | |||
| 3cih_A | 739 | Putative alpha-rhamnosidase; structural genomics, | 4e-10 | |
| 2okx_A | 956 | Rhamnosidase B; alpha barrel, glycoside hydrolase | 2e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-04 | |
| 1v7w_A | 807 | Chitobiose phosphorylase; beta-sandwich, (alpha/al | 8e-08 | |
| 3rrs_A | 822 | Cellobiose phosphorylase; GH94, alpha barrel, disa | 2e-07 | |
| 3qde_A | 811 | Cellobiose phosphorylase; cellulase, phosphate, tr | 9e-07 |
| >3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482} Length = 739 | Back alignment and structure |
|---|
Score = 62.8 bits (152), Expect = 4e-10
Identities = 32/190 (16%), Positives = 70/190 (36%), Gaps = 14/190 (7%)
Query: 612 DLGTHDPWNEMNAYNIHDTSQWKDLNPKFVLQVYRDFAATGDMSFGVDVWPAVRAAMEYM 671
L DP ++ I D + + + L VY + +GD F ++P ++ M+Y+
Sbjct: 368 LLRGKDPVT-SHSNTIMDYTFY------WFLSVYDYYMYSGDRHFVNQLYPRMQTMMDYV 420
Query: 672 E-QFDRDG--DCLIENDGFPDQTYDTWTVHGVSAYCGCLWLAALQAAAAMALQLGDKPFA 728
+ +++G + + + F D G ++ L+ +L+ A A +GDK
Sbjct: 421 LGRTNKNGMVEGMSGDWVFVDWADGYLDKKGELSFEQVLFCRSLETMALCADLVGDKDGQ 480
Query: 729 EYCKGKFLKAKSVFEEKLWNGSYFNYDSGSSSNSKSIQTDQLAGQWYTASSGLPSLFDEA 788
+ + K+ E WN + +S + A + +
Sbjct: 481 QKYEKLASALKAKLEPTFWNNQKQAFVHNCVDGRQSDAVTRYANMFSV----FFDYLNAD 536
Query: 789 QIKSTLQKIF 798
+ ++ Q +
Sbjct: 537 KQQAIKQSVL 546
|
| >2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP} Length = 956 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A* Length = 807 | Back alignment and structure |
|---|
| >3rrs_A Cellobiose phosphorylase; GH94, alpha barrel, disaccharide phosphorylase, transferase; 1.70A {Cellulomonas uda} PDB: 2cqs_A* 2cqt_A* 3qfy_A* 3qfz_A* 3qg0_A* 3act_A* 3acs_A* 3afj_A* Length = 822 | Back alignment and structure |
|---|
| >3qde_A Cellobiose phosphorylase; cellulase, phosphate, transferase; 2.40A {Clostridium thermocellum} Length = 811 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 956 | |||
| 3qde_A | 811 | Cellobiose phosphorylase; cellulase, phosphate, tr | 99.95 | |
| 3rrs_A | 822 | Cellobiose phosphorylase; GH94, alpha barrel, disa | 99.95 | |
| 1v7w_A | 807 | Chitobiose phosphorylase; beta-sandwich, (alpha/al | 99.91 | |
| 3c68_A | 761 | Uncharacterized protein YGJK; GH63, processing alp | 99.85 | |
| 1lf6_A | 684 | Glucoamylase; (alpha/alpha) barrel, 6 alpha-helica | 99.74 | |
| 2z07_A | 420 | Putative uncharacterized protein TTHA0978; unchara | 99.73 | |
| 2jg0_A | 535 | Periplasmic trehalase; family 37, hydrolase, inhib | 99.71 | |
| 2okx_A | 956 | Rhamnosidase B; alpha barrel, glycoside hydrolase | 99.7 | |
| 1ulv_A | 1020 | Glucodextranase; GH family 15, (alpha-alpha)6-barr | 99.64 | |
| 3cih_A | 739 | Putative alpha-rhamnosidase; structural genomics, | 99.61 | |
| 2p0v_A | 489 | Hypothetical protein BT3781; alpha-beta protein, s | 99.1 | |
| 2fba_A | 492 | Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hy | 98.9 | |
| 1gai_A | 472 | Glucoamylase-471; hydrolase, glycosidase, polysacc | 98.88 | |
| 2vn4_A | 599 | Glucoamylase; hydrolase, carbohydrate binding, gly | 98.68 | |
| 3p2c_A | 463 | Putative glycosyl hydrolase; structural genomics, | 98.52 | |
| 3qt9_A | 427 | Putative uncharacterized protein CPE0426; alpha-al | 98.36 | |
| 3qry_B | 426 | Putative uncharacterized protein; alpha-alpha six | 98.22 | |
| 2rdy_A | 803 | BH0842 protein; PSI-II, structural genomics, prote | 96.74 | |
| 1h54_A | 754 | Maltose phosphorylase; hydrolase, maltose metaboli | 95.17 | |
| 2eab_A | 899 | Alpha-fucosidase; glycoside hydrolase; 1.12A {Bifi | 93.9 | |
| 2gz6_A | 388 | N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C | 91.98 | |
| 2gz6_A | 388 | N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C | 88.69 | |
| 3gt5_A | 402 | N-acetylglucosamine 2-epimerase; structural genomi | 86.16 |
| >3qde_A Cellobiose phosphorylase; cellulase, phosphate, transferase; 2.40A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.3e-26 Score=283.60 Aligned_cols=541 Identities=15% Similarity=0.140 Sum_probs=320.0
Q ss_pred eEEeecceeEeeecCCCCCCceEEEEEecccccCCCccCCCceEEEEEEEEeCCCCcEEEEEEEEecccccccccCCCCc
Q 039165 187 TYHALFPRAWTIYDGEPDPELKISCRQISPFIPHNYRDSSLPTAVFVYTLVNTGKDRAKVSLLFTWANSIGGISHLSGDH 266 (956)
Q Consensus 187 ~y~alyPrawt~Y~~~~~~~v~v~~~q~SP~IP~dykdSSlPvavF~~~v~N~~~~~~~vsi~ft~~N~~G~~~~~~~~~ 266 (956)
.|...+=..+++|+. ...+|+++++.|=|. + -||=+-.++|+|+++++.+++|..-.+=..+... ..-.|
T Consensus 94 ~y~~~hg~gyt~f~~-~~~gI~~e~~~fVp~---~-----d~vev~rl~l~N~s~~~R~L~ltsy~E~~l~~~~-~D~~~ 163 (811)
T 3qde_A 94 SYECRHGLGYTKIAG-KRNGIKAEVTFFVPL---N-----YNGEVQKLILKNEGQDKKKITLFSFIEFCLWNAY-DDMTN 163 (811)
T ss_dssp EEEEEECSSEEEEEE-EETTEEEEEEEECCT---T-----CSEEEEEEEEEECSSSCEEEEEECCEEEEEECHH-HHHHC
T ss_pred cEEEEEcCCEEEEEE-ecCCEEEEEEEEEcC---C-----CCEEEEEEEEEECCCCcEEEEEEEEEeeccCCch-hHHhh
Confidence 588999999999985 578899999887654 2 2899999999999999999998653221111100 00002
Q ss_pred ccccccCC--CCceeEEEeeccCCCCCCceEEEEEeecCCeEEEEe-cccCCCCCcccchhhHHHHHhhCCCCCCCCCCC
Q 039165 267 VNEPFLGD--DGVSGVLLHHKTARGNPPVTFAVAACETQNVNVTVL-PCFGLSEGSCVTAKGMWGTMVQDGQFDRENFKS 343 (956)
Q Consensus 267 ~n~~~~~~--~~v~Gv~l~~~~~~~~~p~t~aiaa~~~~~v~vs~~-~~f~~~~~~~~~~~~~W~~~~~~G~l~~~~~~~ 343 (956)
++..|... +-..|++++.+... ..+..+++++...+..+.+.- ..|-..+.+ ..+. ..+ ++|.|.+.
T Consensus 164 ~~~~~~~te~~~~~~~i~~~~~~~-~~~~~~~f~~~~~~~~~~~tdR~~FiGr~gs---~~~P-~a~-~~g~Ls~~---- 233 (811)
T 3qde_A 164 FQRNFSTGEVEIEGSVIYHKTEYR-ERRNHYAFYSVNAKISGFDSDRDSFIGLYNG---FDAP-QAV-VNGKSNNS---- 233 (811)
T ss_dssp HHHHTTTCBEEEETTEEEECTTTT-TTCCEEEEEEESSCCSEEEEEHHHHHCTTCC---TTSC-HHH-HHTSCCCC----
T ss_pred hhceeEEEEEeccCCEEEEECCCC-CCCCeEEEEEecCCCceEEcchheEEeCCCC---cccc-hhh-hCCCCCCC----
Confidence 33323211 11246777765432 223335555544333222110 012111100 0110 112 34555432
Q ss_pred CCCCCCCCCCceeeEEEEEEEecCCCeEEEEEEEEeeC-Cce-eccC-C---cccccccccccCCCcccHHHHHHHHHHh
Q 039165 344 GPSMPSSPGEALCAAVSASAWVEPHGKCTVAFALAWSS-PKV-KFLK-G---SSYHRRYTKFYGTSEGVAQDLVHDALMN 417 (956)
Q Consensus 344 ~~~~~s~~~~~~~~ava~~~~l~pg~~~tv~F~LaW~~-P~~-~f~~-g---~~~~rrYt~ff~~~~~~a~~va~~al~~ 417 (956)
...+...++|+...++|+||+++++.|.|.--- |.- +|.. + +.--+...+-|.+ .+-++.++.+
T Consensus 234 -----~~~~~dp~~al~~~i~L~PGe~~~i~f~lG~~~~~~~~~~~~~~~~~~e~a~~l~~ky~~-----~~~~~~a~~~ 303 (811)
T 3qde_A 234 -----VADGWAPIASHSIEIELNPGEQKEYVFIIGYVENKDEEKWESKGVINKKKAYEMIEQFNT-----VEKVDKAFEE 303 (811)
T ss_dssp -----CCBSSCEEEEEEEEEEECTTCEEEEEEEEEEEECCGGGSEEETTEECCHHHHHHHHHTSS-----HHHHHHHHHH
T ss_pred -----ccCCcCCEEEEEEEEEECCCCEEEEEEEEEEECCcccccccccccchHHHHHHHHHHHcC-----hhHHHHHHHH
Confidence 234455688999999999999999999998631 110 0000 0 0000111111111 1112223332
Q ss_pred hH-HHHHHHHHhccccccCCCCchhhhhhhhhhhheeecCceeeecCCCCCCCcccCCCCcccccccccccccccccccc
Q 039165 418 YK-RWEEDIEKWQNPILRDDRLPEWYKFTLFNELYFLVAGGTVWIDSRLPAPDKRNHRNGEKTDVKGTEAEVNLSDGALV 496 (956)
Q Consensus 418 ~~-~we~~i~~wq~pil~d~~LP~Wyk~alfNelY~l~~Ggt~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (956)
.. .|++.+...|-. -|+ .-||.|+- .|+.. |+
T Consensus 304 ~~~yW~~~l~~~~v~------tpd----~~~d~~~N------~wl~~-------------------q~------------ 336 (811)
T 3qde_A 304 LKSYWNALLSKYFLE------SHD----EKLNRMVN------IWNQY-------------------QC------------ 336 (811)
T ss_dssp HHHHHHHHHTTEEEE------CSC----HHHHHHHH------THHHH-------------------HH------------
T ss_pred HHHHHHHHhCceEec------CCc----HHHHHHHH------HHHHH-------------------HH------------
Confidence 22 244444333311 121 23333331 02110 00
Q ss_pred cccccCCCcccccccccccCCCCcCCCCcccccccCCCCCCCCcceeeeccccccccccchhhHHHHHhhhcChHHHHHH
Q 039165 497 KYTTTSDYYSEDESVVNHEGSNSYSQHHPITLLNEENDSDDGGRFLYLEGVEYVMWCTYDVHFYASFALLELFPKIELNI 576 (956)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~GrF~~lEG~ey~~~nT~DVh~YaS~all~LfPeL~rsi 576 (956)
....+ -+.++ .+.| . .| -..+.+=|.. ..+++++++.|+++|+.
T Consensus 337 -----------~~~~~---~~rs~------s~~~--~----g~---------~~~~G~RD~~-qd~~~~~~~~p~~~r~~ 380 (811)
T 3qde_A 337 -----------MVTFN---MSRSA------SYFE--S----GI---------GRGMGFRDSN-QDLLGFVHQIPERARER 380 (811)
T ss_dssp -----------HHHHH---HTTSB------SSSS--B----SS---------SCCEEHHHHH-HHHHTTTTTCHHHHHHH
T ss_pred -----------HHHhh---hccCc------ceee--c----CC---------cCCCccHHHH-HHHHHHHhcCHHHHHHH
Confidence 00000 00000 0111 0 01 0011123766 44589999999999999
Q ss_pred HHHHHHHhccccCcceeeeccCcccccccCCCCCCCCCCCCCCCcC-c---ccccccCcccccCCHHHHHHHHHHHHHhC
Q 039165 577 QRDFAKAVLSEDGRKVKFLAEGNTGIRKLRGAVPHDLGTHDPWNEM-N---AYNIHDTSQWKDLNPKFVLQVYRDFAATG 652 (956)
Q Consensus 577 l~~fa~~~~~~D~~~~~~~~~g~~~~~k~~G~vPhdlG~~~Pw~~~-~---~y~~~D~~~WkDln~~fVl~vyr~~~~Tg 652 (956)
+..++..| .+| |.+||.... +... + .+...|..+| +|+++++|++.||
T Consensus 381 il~~~~~Q-~~d------------------G~~~h~~~p---~~~~g~~~~~~~~~D~~lW------~i~av~~Y~~~TG 432 (811)
T 3qde_A 381 LLDLAATQ-LED------------------GSAYHQYQP---LTKKGNNEIGSNFNDDPLW------LILATAAYIKETG 432 (811)
T ss_dssp HHHHHTTB-CTT------------------SCBCSEECT---TTCCEECTTCCCBTTHHHH------HHHHHHHHHHHHC
T ss_pred HHHHHhhc-ccC------------------CCccceecC---CCCCCCCCCCCCcccchhH------HHHHHHHHHHHHC
Confidence 99998877 344 667766531 1110 0 1334566666 9999999999999
Q ss_pred CHHHHHH-------------HHHHHHHHHHHHH-hcCCCCCCcccCCCCCCCccCCcc--------------------cc
Q 039165 653 DMSFGVD-------------VWPAVRAAMEYME-QFDRDGDCLIENDGFPDQTYDTWT--------------------VH 698 (956)
Q Consensus 653 D~~fL~~-------------~wp~vk~ale~l~-~~D~DgDGLie~~G~~dqTyD~w~--------------------~~ 698 (956)
|.+||++ +|++++++++|+. +.++ +||+.. |..| +.|++. ..
T Consensus 433 D~~~L~e~~p~~~~~~~~~tl~eh~~ra~~~~~~~~g~--~GL~~~-g~~D-WnD~ln~~~~~~~vg~~~~~vtp~~~~~ 508 (811)
T 3qde_A 433 DYSILKEQVPFNNDPSKADTMFEHLTRSFYHVVNNLGP--HGLPLI-GRAD-WNDCLNLNCFSTVPDESFQTTTSKDGKV 508 (811)
T ss_dssp CGGGGGSEEEETTEEEEEEEHHHHHHHHHHHHHTCBCT--TSSBBC-BTCS-SSTTCCSSCCCCCTTSCTTTSCCCCCSS
T ss_pred CHHHHHhhhhhhcCCcccccHHHHHHHHHHHHHhcCCC--CCCccc-ccCC-chhhccccccccccCccccccccccCCc
Confidence 9999985 6889999999987 4654 799874 3333 122221 35
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhCcCCceeE--ecCCCC-CC---Ccccccccchh
Q 039165 699 GVSAYCGCLWLAALQAAAAMALQLGDKPFAEYCKGKFLKAKSVFEEKLWNGSYFN--YDSGSS-SN---SKSIQTDQLAG 772 (956)
Q Consensus 699 G~say~~~Lw~aAL~aaa~mA~~LGd~~~A~~~~~~a~~~k~~~~~~lWnG~yy~--yD~~~~-~~---~~si~adQl~G 772 (956)
|+|++++++||.||+.+++||+.+|+++.|++|++.+++++++|+++||||+||+ +|..+. .. +..+..+ +.+
T Consensus 509 gesv~~~al~y~AL~~~a~lA~~lGd~~~A~~~~~~A~~lk~a~~~~~Wdg~~y~ra~~~dg~~~gs~~~~~~qi~-~~~ 587 (811)
T 3qde_A 509 AESVMIAGMFVFIGKDYVKLCEYMGLEEEARKAQQHIDAMKEAILKYGYDGEWFLRAYDDFGRKVGSKENEEGKIF-IES 587 (811)
T ss_dssp CEEHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSBCSSSBCCEECTTSCEESSTTSSSCCEE-SHH
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhccCcCeEEEEEcCCCCCCCccCCCCceEE-ecc
Confidence 8999999999999999999999999999999999999999999999999999875 443321 11 1223333 358
Q ss_pred hHHHHhcCCCCCCCHH-HHHHHHHHHHhhcCccccCCcccccccccCC--------CCC---CCCCCCCCCcchHHHHHH
Q 039165 773 QWYTASSGLPSLFDEA-QIKSTLQKIFDFNVMKVKGGRMGAVNGMHPN--------GKV---DETCMQSREIWTGVTYGV 840 (956)
Q Consensus 773 qw~a~~~GL~~il~~e-~~~saL~~V~~~nv~~~~~g~~G~vng~~p~--------G~~---d~~s~qs~evW~gvty~v 840 (956)
|.|+.++| +++++ +++++|++|.++++.++ |+.. +.|. |.+ .......+.+|++.+.++
T Consensus 588 q~~avlsG---ia~~e~ra~~~m~~v~~~L~t~~-----Glrl-l~p~f~~~~~d~g~~~~Y~pg~~enG~iy~H~~~w~ 658 (811)
T 3qde_A 588 QGFCVMAE---IGLEDGKALKALDSVKKYLDTPY-----GLVL-QNPAFTRYYIEYGEISTYPPGYKENAGIFCHNNAWI 658 (811)
T ss_dssp HHHHHHTT---CSSSSSHHHHHHHHHHHHHCCTT-----CCCS-EESCCCSCCTTTGGGGTSCTTSTTTTCEEHHHHHHH
T ss_pred hhHHHHhC---CCCchHHHHHHHHHHHHHhCCCc-----ceEe-ecCCccccCCCCCceeccCCCccccccccchHHHHH
Confidence 99999988 56999 99999999999888664 2211 1121 100 011235778999999999
Q ss_pred HHHHHHcCChHHHHHHHHHHHHhcccccccCccCCCccccccC
Q 039165 841 AATMILAGMEKEAFTTAEGIFTAGWSEEGYGYWFQTPEAWTMD 883 (956)
Q Consensus 841 Aa~mi~~G~~eeA~~i~~~v~~~~w~~~~~g~~~qtPE~~~~~ 883 (956)
+.++.++|..++|+++++.+....-.. ..-.--+.||.++.+
T Consensus 659 ~~a~a~~G~~~~A~~~~~~l~p~~~~~-~~~~~~~~Py~~~~~ 700 (811)
T 3qde_A 659 ICAETVVGRGDMAFDYYRKIAPAYIED-VSDIHKLEPYVYAQM 700 (811)
T ss_dssp HHHHHHTTCHHHHHHHHHHHCGGGSGG-GHHHHCSCTTSCEEE
T ss_pred HHHHHHcCCHHHHHHHHHHhChhhhcc-hhhhcCcCcEEeccc
Confidence 999999999999999999987643220 011113788887754
|
| >3rrs_A Cellobiose phosphorylase; GH94, alpha barrel, disaccharide phosphorylase, transferase; 1.70A {Cellulomonas uda} PDB: 3rsy_A* 3s4a_A* 3s4b_A* 3s4c_A* 3s4d_A* 2cqs_A* 2cqt_A* 3qfy_A* 3qfz_A* 3qg0_A* 3act_A* 3acs_A* 3afj_A* | Back alignment and structure |
|---|
| >1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A* | Back alignment and structure |
|---|
| >1lf6_A Glucoamylase; (alpha/alpha) barrel, 6 alpha-helical hairpin torroid, super beta sandwich, carbohydrase family GH15; 2.10A {Thermoanaerobacteriumthermosaccharolyticum} SCOP: a.102.1.5 b.30.5.5 PDB: 1lf9_A* | Back alignment and structure |
|---|
| >2z07_A Putative uncharacterized protein TTHA0978; uncharacterized conserved protein, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
| >2jg0_A Periplasmic trehalase; family 37, hydrolase, inhibitor, glycoside hydrolase, glycosidase, 1-thiatrehazolin; HET: TTZ; 1.50A {Escherichia coli} SCOP: a.102.1.9 PDB: 2jf4_A* 2jjb_A* 2wyn_A* | Back alignment and structure |
|---|
| >2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP} | Back alignment and structure |
|---|
| >1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A* | Back alignment and structure |
|---|
| >3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
| >2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8 | Back alignment and structure |
|---|
| >2fba_A Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hydrolase; 1.10A {Saccharomycopsis fibuligera} SCOP: a.102.1.1 PDB: 1ayx_A* 2f6d_A | Back alignment and structure |
|---|
| >1gai_A Glucoamylase-471; hydrolase, glycosidase, polysaccharide degradation, glycoPro; HET: MAN NAG BMA GAC; 1.70A {Aspergillus awamori} SCOP: a.102.1.1 PDB: 1gah_A* 3gly_A* 1dog_A* 1glm_A* 1agm_A* 3eqa_A* | Back alignment and structure |
|---|
| >2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A* | Back alignment and structure |
|---|
| >3p2c_A Putative glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE PGE; 1.60A {Bacteroides ovatus} SCOP: a.102.1.8 PDB: 3on6_A* | Back alignment and structure |
|---|
| >3qt9_A Putative uncharacterized protein CPE0426; alpha-alpha six fold, glycoside hydrolase, mannosidase, HYDR; HET: YDR; 2.05A {Clostridium perfringens} SCOP: a.102.1.8 PDB: 3qt3_A* 2nvp_A | Back alignment and structure |
|---|
| >3qry_B Putative uncharacterized protein; alpha-alpha six fold, glycoside hydrolase, mannosidase, 1- deoxymannojirimycin, hydrolase; HET: DMJ; 1.75A {Streptococcus pneumoniae} SCOP: a.102.1.0 PDB: 3qpf_A* 3qsp_A* | Back alignment and structure |
|---|
| >2rdy_A BH0842 protein; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.03A {Bacillus halodurans c-125} | Back alignment and structure |
|---|
| >1h54_A Maltose phosphorylase; hydrolase, maltose metabolism; 2.15A {Lactobacillus brevis} SCOP: a.102.1.4 b.30.5.3 | Back alignment and structure |
|---|
| >2eab_A Alpha-fucosidase; glycoside hydrolase; 1.12A {Bifidobacterium bifidum} PDB: 2eac_A* 2ead_A* 2eae_A* | Back alignment and structure |
|---|
| >2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} | Back alignment and structure |
|---|
| >2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} | Back alignment and structure |
|---|
| >3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 956 | ||||
| d1v7wa1 | 531 | a.102.1.4 (A:271-801) Chitobiose phosphorylase Chb | 8e-12 |
| >d1v7wa1 a.102.1.4 (A:271-801) Chitobiose phosphorylase ChbP {Vibrio proteolyticus [TaxId: 671]} Length = 531 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: Glycosyltransferase family 36 C-terminal domain domain: Chitobiose phosphorylase ChbP species: Vibrio proteolyticus [TaxId: 671]
Score = 66.5 bits (161), Expect = 8e-12
Identities = 50/388 (12%), Positives = 98/388 (25%), Gaps = 21/388 (5%)
Query: 543 YLEGVEYVMWCTYDVHFYASFALLELFPKIELNIQRDFAKAVLSEDGRKVKFLAEGNTGI 602
++E D A ++ P++ D + G + L + +
Sbjct: 67 FIEVGGRTGLGYRDTAQDA-ISVPHANPEMTRKRIVDLL-RGQVKAGYGLH-LFDPDWFD 123
Query: 603 RKLRGAVPHDLGTHDPWNEMNAYNIHDTSQWKDLNPKFVLQVYRDFAATGDMSFGVDVWP 662
+ P T P D + + + + TG+ SF + P
Sbjct: 124 PEKEDVAPSKSPTVVPTPSDEDKIHGIKDTCSDDHLWLIPTICKYVMETGETSFFDQMIP 183
Query: 663 AVRAAMEYM-EQFDRDGDCLIEN---DGFPDQTYDTWT-----VHGVSAYCGCLWLAALQ 713
+ E D E G W G S+ L ALQ
Sbjct: 184 YADGGEASVYEHMKAALDFSAEYVGQTGICKGLRADWNDCLNLGGGESSMVSFLHFWALQ 243
Query: 714 AAAAMALQLGDKPFAEYCKGKFLKAKSVFEEKLWNGSYFNYDSGSSSNSKSIQT-DQLAG 772
+A LG + E LW+ Y G + N I T Q G
Sbjct: 244 EFIDLAKFLGKDQDVNTYTEMAANVREACETHLWDDEGGWYIRGLTKNGDKIGTAQQQEG 303
Query: 773 QWYTASSGLPSLF---DEAQIKSTLQKIF-----DFNVMKVKGGRMGAVNGMHPNGKVDE 824
+ + S+ L L + + + + + + + + + +V +
Sbjct: 304 RVHLESNTLAVLSGLASQERGEQAMDAVDEHLFSPYGLHLNAPSFSTPNDDIGFVTRVYQ 363
Query: 825 TCMQSREIWTGVTYGVAATMILAGMEKEAFTTAEGIFTAGWSEEGYGYWFQTPEAWTMDG 884
++ I++ G A + + ++ +
Sbjct: 364 GVKENGAIFSHPNPWAWVAETKLGRGDRAMKFYDALNPYNQNDIIEKRIAEPYSYVQFIM 423
Query: 885 HFRSLIYMRPLSIWGMQWALSMPKTVLQ 912
+ R W + V
Sbjct: 424 GRDHQDHGRANHPWLTGTSGWAYFAVTN 451
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 956 | |||
| d1v7wa1 | 531 | Chitobiose phosphorylase ChbP {Vibrio proteolyticu | 99.59 | |
| d2jg0a1 | 511 | Periplasmic trehalase TreA {Escherichia coli [TaxI | 99.36 | |
| d1ulva1 | 413 | Glucodextranase, domain A {Arthrobacter globiformi | 99.04 | |
| d1lf6a1 | 397 | Bacterial glucoamylase, C-terminal domain {Thermoa | 99.01 | |
| d1gaia_ | 472 | Glucoamylase {Aspergillus awamori, variant x100 [T | 98.76 | |
| d2fbaa1 | 492 | Glucoamylase {Yeast (Saccharomycopsis fibuligera) | 98.57 | |
| d1v7wa2 | 270 | Chitobiose phosphorylase ChbP {Vibrio proteolyticu | 96.94 | |
| d2p0va1 | 443 | Hypothetical protein BT3781 {Bacteroides thetaiota | 96.8 | |
| d2nvpa1 | 426 | Hypothetical protein CPF0428 {Clostridium perfring | 96.56 | |
| d1h54a1 | 485 | Lactobacillus maltose phosphorylase, central domai | 95.55 |
| >d1v7wa1 a.102.1.4 (A:271-801) Chitobiose phosphorylase ChbP {Vibrio proteolyticus [TaxId: 671]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha/alpha toroid superfamily: Six-hairpin glycosidases family: Glycosyltransferase family 36 C-terminal domain domain: Chitobiose phosphorylase ChbP species: Vibrio proteolyticus [TaxId: 671]
Probab=99.59 E-value=1.5e-14 Score=165.97 Aligned_cols=289 Identities=14% Similarity=0.132 Sum_probs=180.5
Q ss_pred cchhhHHHHHhhhcChHHHHHHHHHHHHHhccccCcceeeec-cCcccccccCCCCCCCCCCC--CC----CCcCccccc
Q 039165 555 YDVHFYASFALLELFPKIELNIQRDFAKAVLSEDGRKVKFLA-EGNTGIRKLRGAVPHDLGTH--DP----WNEMNAYNI 627 (956)
Q Consensus 555 ~DVh~YaS~all~LfPeL~rsil~~fa~~~~~~D~~~~~~~~-~g~~~~~k~~G~vPhdlG~~--~P----w~~~~~y~~ 627 (956)
-|..+++ ++++++.|+++|++|+.+++.| ..++...+... .|...+ +..+ .+...+.. .| +........
T Consensus 79 rD~~~~~-~~~~~~~pe~Ar~~L~~~~~~q-~~~g~~~~~~~~~g~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (531)
T d1v7wa1 79 RDTAQDA-ISVPHANPEMTRKRIVDLLRGQ-VKAGYGLHLFDPDWFDPE-KEDV-APSKSPTVVPTPSDEDKIHGIKDTC 154 (531)
T ss_dssp HHHHHHT-TSCTTTCHHHHHHHHHHHHHTB-CTTSCBCSEECGGGGCC------------------------CCCGGGCB
T ss_pred cHHHHHH-HHHHhcCHHHHHHHHHHHHhhh-hhcccchhhcCCCcCcCC-cccc-cccccCcCCCCCccccccccccccc
Confidence 3776554 8889999999999999888876 44544332221 111100 0000 00011100 00 000111122
Q ss_pred ccCcccccCCHHHHHHHHHHHHHhCCHHHHHH-----------HHHHHHHHHHHHHhcCCCCCCcccCCCCCCCccCCcc
Q 039165 628 HDTSQWKDLNPKFVLQVYRDFAATGDMSFGVD-----------VWPAVRAAMEYMEQFDRDGDCLIENDGFPDQTYDTWT 696 (956)
Q Consensus 628 ~D~~~WkDln~~fVl~vyr~~~~TgD~~fL~~-----------~wp~vk~ale~l~~~D~DgDGLie~~G~~dqTyD~w~ 696 (956)
.|.+.| +++++++|++.|||.+||++ +|.++++++++....+ +++||+.. | ++..-|...
T Consensus 155 ~d~~~~------i~~a~~~Y~~~TgD~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~gl~~~-g-~~dw~d~~~ 225 (531)
T d1v7wa1 155 SDDHLW------LIPTICKYVMETGETSFFDQMIPYADGGEASVYEHMKAALDFSAEYV-GQTGICKG-L-RADWNDCLN 225 (531)
T ss_dssp SSGGGG------HHHHHHHHHHHHCCGGGGGCEEECTTSCEEEHHHHHHHHHHHHHHSB-CTTSCBEE-E-TCSSSTTCC
T ss_pred cccHHH------HHHHHHHHHHhhCCHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhhee-CCCCCccc-C-CCccccccc
Confidence 344555 99999999999999999987 5666777777766543 46788753 2 111111111
Q ss_pred -cccchHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhCcCCc--eeE--ecCCCC----CCCccccc
Q 039165 697 -VHGVSAYCGCLWLAALQAAAAMALQLGDKPFAEYCKGKFLKAKSVFEEKLWNGS--YFN--YDSGSS----SNSKSIQT 767 (956)
Q Consensus 697 -~~G~say~~~Lw~aAL~aaa~mA~~LGd~~~A~~~~~~a~~~k~~~~~~lWnG~--yy~--yD~~~~----~~~~si~a 767 (956)
-.|.+++++++++.||+.+++||+.+|+++.+++|+++++++++.|++++|+.+ +|. ++..+. ..+.....
T Consensus 226 ~~~~~~~~~~~~~~~al~~~~~la~~~g~~~~a~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (531)
T d1v7wa1 226 LGGGESSMVSFLHFWALQEFIDLAKFLGKDQDVNTYTEMAANVREACETHLWDDEGGWYIRGLTKNGDKIGTAQQQEGRV 305 (531)
T ss_dssp CEEEEEHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHSEETTTTEECCEECTTSCEESCTTCSSCCE
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCCccccceeEEEcCCCCcccccCcccccc
Confidence 237899999999999999999999999999999999999999999999999854 332 232211 01111111
Q ss_pred ccchhhHHHHhcCCCCCCCHHHHHHHHHHHHhhcCccccCCcccccccccCC-----CCC---CCCCCCCCCcchHHHHH
Q 039165 768 DQLAGQWYTASSGLPSLFDEAQIKSTLQKIFDFNVMKVKGGRMGAVNGMHPN-----GKV---DETCMQSREIWTGVTYG 839 (956)
Q Consensus 768 dQl~Gqw~a~~~GL~~il~~e~~~saL~~V~~~nv~~~~~g~~G~vng~~p~-----G~~---d~~s~qs~evW~gvty~ 839 (956)
+ ..++-++.+.| ++++++++++++.+.+.++.+.. .......... +.. +......+.+|+..+..
T Consensus 306 ~-~~~~~~~l~~g---~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 378 (531)
T d1v7wa1 306 H-LESNTLAVLSG---LASQERGEQAMDAVDEHLFSPYG---LHLNAPSFSTPNDDIGFVTRVYQGVKENGAIFSHPNPW 378 (531)
T ss_dssp E-HHHHHHHHHTT---CSCHHHHHHHHHHHHHHHEETTE---ECSEESCCCSCCTTTCGGGGSCTTBTTBTSEESTTHHH
T ss_pred c-hhhcchhhhcC---CCCHHHHHHHHHHHHHhhcCchh---hhccccccccchhhcccccccCCccccCCCcCcHHHHH
Confidence 1 34566676666 57999999999999887664321 0000000000 000 11123456799999999
Q ss_pred HHHHHHHcCChHHHHHHHHHHHHh
Q 039165 840 VAATMILAGMEKEAFTTAEGIFTA 863 (956)
Q Consensus 840 vAa~mi~~G~~eeA~~i~~~v~~~ 863 (956)
+|..+.+.|..++|.++.+.+...
T Consensus 379 ~~~al~~~G~~d~A~~~~~~~~~~ 402 (531)
T d1v7wa1 379 AWVAETKLGRGDRAMKFYDALNPY 402 (531)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHCGG
T ss_pred HHHHHHHcCCHHHHHHHHHhhchh
Confidence 999999999999999999886543
|
| >d2jg0a1 a.102.1.9 (A:37-547) Periplasmic trehalase TreA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1ulva1 a.102.1.5 (A:274-686) Glucodextranase, domain A {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
| >d1lf6a1 a.102.1.5 (A:288-684) Bacterial glucoamylase, C-terminal domain {Thermoanaerobacterium thermosaccharolyticum [TaxId: 1517]} | Back information, alignment and structure |
|---|
| >d1gaia_ a.102.1.1 (A:) Glucoamylase {Aspergillus awamori, variant x100 [TaxId: 105351]} | Back information, alignment and structure |
|---|
| >d2fbaa1 a.102.1.1 (A:1-492) Glucoamylase {Yeast (Saccharomycopsis fibuligera) [TaxId: 4944]} | Back information, alignment and structure |
|---|
| >d1v7wa2 b.30.5.3 (A:1-270) Chitobiose phosphorylase ChbP {Vibrio proteolyticus [TaxId: 671]} | Back information, alignment and structure |
|---|
| >d2p0va1 a.102.1.8 (A:39-481) Hypothetical protein BT3781 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
| >d2nvpa1 a.102.1.8 (A:2-427) Hypothetical protein CPF0428 {Clostridium perfringens [TaxId: 1502]} | Back information, alignment and structure |
|---|
| >d1h54a1 a.102.1.4 (A:269-753) Lactobacillus maltose phosphorylase, central domain {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|