Citrus Sinensis ID: 039280
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 487 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SFU3 | 532 | Purple acid phosphatase 1 | yes | no | 0.960 | 0.879 | 0.704 | 0.0 | |
| O48840 | 545 | Purple acid phosphatase 1 | no | no | 0.958 | 0.856 | 0.596 | 1e-159 | |
| Q6TPH1 | 458 | Purple acid phosphatase 2 | no | no | 0.856 | 0.910 | 0.579 | 1e-144 | |
| Q8S340 | 434 | Purple acid phosphatase 2 | no | no | 0.724 | 0.813 | 0.392 | 1e-73 | |
| Q9LXI7 | 427 | Probable purple acid phos | no | no | 0.700 | 0.798 | 0.401 | 1e-69 | |
| Q9LXI4 | 437 | Purple acid phosphatase 2 | no | no | 0.706 | 0.787 | 0.379 | 2e-68 | |
| Q9LJU7 | 437 | Purple acid phosphatase 1 | no | no | 0.706 | 0.787 | 0.385 | 5e-67 | |
| Q9C510 | 466 | Purple acid phosphatase 6 | no | no | 0.611 | 0.639 | 0.381 | 6e-58 | |
| Q9SDZ9 | 465 | Purple acid phosphatase 2 | N/A | no | 0.611 | 0.640 | 0.369 | 6e-56 | |
| Q9SIV9 | 468 | Purple acid phosphatase 1 | no | no | 0.720 | 0.75 | 0.326 | 1e-54 |
| >sp|Q9SFU3|PPA15_ARATH Purple acid phosphatase 15 OS=Arabidopsis thaliana GN=PAP15 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 685 bits (1767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/474 (70%), Positives = 385/474 (81%), Gaps = 6/474 (1%)
Query: 6 AIGIPTTLEGPFKPVTAPLDKNLRLNVSDLPYV-LQNNAQGEGFQPEQIFVSLSARYDSV 64
A IP+TL+GPF PVT PLD +LR DLP + + GF+PEQI +SLS+ +DS+
Sbjct: 19 AHSIPSTLDGPFVPVTVPLDTSLRGQAIDLPDTDPRVRRRVIGFEPEQISLSLSSDHDSI 78
Query: 65 WISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYT 124
W+SWITGEFQIG + PLDP + S+V F R SL+++A+G+SLVY+QLYP DGL NYT
Sbjct: 79 WVSWITGEFQIGKKVKPLDPTSINSVVQFGTLRHSLSHEAKGHSLVYSQLYPFDGLLNYT 138
Query: 125 SGIIHHVLITGLQPNTLYEYECGDPSISAMSSSHYFRTMPVSGPSDYPNRIAVVGDLGLT 184
SGIIHHV ITGL+P+T+Y Y CGDPS AMS H+FRTMPVS PS YP RIAVVGDLGLT
Sbjct: 139 SGIIHHVRITGLKPSTIYYYRCGDPSRRAMSKIHHFRTMPVSSPSSYPGRIAVVGDLGLT 198
Query: 185 YNTTTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYW 244
YNTT T++HL+ N PDL+LLIGD+SYA+LYLTNGT S CY C E+PI ETYQPRWDYW
Sbjct: 199 YNTTDTISHLIHNSPDLILLIGDVSYANLYLTNGTSSDCYSCSFPETPIHETYQPRWDYW 258
Query: 245 GRYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGI 304
GR+M+ L S VP MVIEG HEIE QAEN+TF AYSSRFAFP ESGSSS+LYYSFNAGGI
Sbjct: 259 GRFMENLTSKVPLMVIEGNHEIELQAENKTFEAYSSRFAFPFNESGSSSTLYYSFNAGGI 318
Query: 305 HFVMLSAYIDYDKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRV 364
HFVML AYI YDKS++QY+WL+ DL VDR VTPWL+A+WHPPWYS+Y+AHYRE ECM+
Sbjct: 319 HFVMLGAYIAYDKSAEQYEWLKKDLAKVDRSVTPWLVASWHPPWYSSYTAHYREAECMKE 378
Query: 365 EMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDGGNVEGLDIVHADEP 424
ME+LLY YG DIVFNGHVHAYERSNRVYNY LDPCGPVYI++GDGGN E + I HAD+P
Sbjct: 379 AMEELLYSYGTDIVFNGHVHAYERSNRVYNYELDPCGPVYIVIGDGGNREKMAIEHADDP 438
Query: 425 GNCPEPSTTPD--MGGSCAFNFTSGPASGKFCWDRQPDYSAYRESSFGHGILEV 476
G CPEP TTPD MGG CA+NFT S KFCWDRQPDYSA RESSFGHGILE+
Sbjct: 439 GKCPEPLTTPDPVMGGFCAWNFT---PSDKFCWDRQPDYSALRESSFGHGILEM 489
|
Acid phosphatase activity with p-nitrophenyl phosphate (pNPP), D-myoinositol 1-phosphate (Ins(1)P1), phytic acid and Myo-inositol hexakisphosphate. Low or no activity with Glc-6-P and ATP. Confers shoot growth stimulation, enhanced salt and osmotic stress tolerance, and ABA insensitivity. May modulate ascorbic acid (AsA) levels by controlling the input of myoinositol into this branch of AsA biosynthesis. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 2 |
| >sp|O48840|PPA13_ARATH Purple acid phosphatase 13 OS=Arabidopsis thaliana GN=PAP13 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 561 bits (1445), Expect = e-159, Method: Compositional matrix adjust.
Identities = 290/486 (59%), Positives = 342/486 (70%), Gaps = 19/486 (3%)
Query: 8 GIPTTLEGPFKPVTAPLDKNLRLNVSDLPYVLQNNAQ--GEGFQPEQIFVSLSARYDSVW 65
G P+TL+GP PVTAPLD NL DLP + + E PEQI VSLS +DSVW
Sbjct: 25 GFPSTLDGPLNPVTAPLDPNLNPIAFDLPESDPSFVKPISEFLLPEQISVSLSYSFDSVW 84
Query: 66 ISWITGEFQIGDNIS-PLDPELVQSIVYFRVF--RSSLTYQAEGYSLVYNQLYPPD-GLQ 121
ISW+TGE+QIG+ S PLDP VQSIV +R F R + A G+S+VYNQ Y + G
Sbjct: 85 ISWVTGEYQIGEKDSAPLDPNCVQSIVQYREFDVRRTRKQNATGHSIVYNQQYSSENGFM 144
Query: 122 NYTSGIIHHVLITGLQPNTLYEYECGDPSISAMSSSHYFRTMPVSGPSDYPNRIAVVGDL 181
NYTSGIIHHV +TGL+PNTLY Y+CGDPS+SAMS +YFRTMP S +YP+RI V GDL
Sbjct: 145 NYTSGIIHHVQLTGLKPNTLYRYQCGDPSLSAMSKEYYFRTMPKSTSENYPHRIVVAGDL 204
Query: 182 GLTYNTTTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQ------- 234
GLTYNT+T + H++SNHPDL++L+G SYAD YL N TK C C ++
Sbjct: 205 GLTYNTSTVLGHILSNHPDLVVLLGGFSYADTYLANKTKLDCSSCHCDQNGTSSDCGSCY 264
Query: 235 ---ETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIERQAENQ-TFAAYSSRFAFPSEESG 290
ETYQPRWDYWGR+M+PL +NVPTM++ GEHEIE Q EN TFAAYSSRFAFPS ESG
Sbjct: 265 SSGETYQPRWDYWGRFMEPLTANVPTMMVAGEHEIEPQTENNLTFAAYSSRFAFPSNESG 324
Query: 291 SSSSLYYSFNAGGIHFVMLSAYIDYDKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYS 350
S S LYYSFNAGG HF++L++Y YD SSDQY WLESDL ++R TPW++A W PWYS
Sbjct: 325 SFSPLYYSFNAGGAHFIVLNSYTLYDNSSDQYIWLESDLIKINRSETPWVVATWSLPWYS 384
Query: 351 TYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDG 410
T+ HYRE E MR+ +EDLLY Y VDIVFN HV AYERSNRVYNY+LD CGPVYI G G
Sbjct: 385 TFKGHYREAESMRIHLEDLLYNYRVDIVFNSHVDAYERSNRVYNYTLDQCGPVYITTGAG 444
Query: 411 GNVEGLDIVHADEPGNCPEPSTTPDMGGSCAFNFTSGPASGKFCWDRQPDYSAYRESSFG 470
G L+ H D+PGN P+PS S N T P + C +QP+YSAYRESSFG
Sbjct: 445 G-AGKLETQHVDDPGNIPDPSQNYSCRSS-GLNSTLEPVKDETCPVKQPEYSAYRESSFG 502
Query: 471 HGILEV 476
GILEV
Sbjct: 503 FGILEV 508
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q6TPH1|PPA23_ARATH Purple acid phosphatase 23 OS=Arabidopsis thaliana GN=PAP23 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 511 bits (1315), Expect = e-144, Method: Compositional matrix adjust.
Identities = 245/423 (57%), Positives = 309/423 (73%), Gaps = 6/423 (1%)
Query: 9 IPTTLEGPFKPVTAPLDKNLRLNVSDLPY---VLQNNAQGEGFQPEQIFVSLSARYDSVW 65
IPTTL+GPFKP+T + +LR DLP L+ F PEQI ++LS S+W
Sbjct: 22 IPTTLDGPFKPLTRRFEPSLRRGSDDLPMDHPRLRKRNVSSDF-PEQIALALSTP-TSMW 79
Query: 66 ISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTS 125
+SW+TG+ +G ++ PLDP + S V++ + + + +G + VY+QLYP DGL NYTS
Sbjct: 80 VSWVTGDAIVGKDVKPLDPSSIASEVWYGKEKGNYMLKKKGNATVYSQLYPSDGLLNYTS 139
Query: 126 GIIHHVLITGLQPNTLYEYECGDPSISAMSSSHYFRTMPVSGPSDYPNRIAVVGDLGLTY 185
GIIHHVLI GL+P T Y Y CGD S+ AMS F T+P+ YP+RIA VGDLGLT
Sbjct: 140 GIIHHVLIDGLEPETRYYYRCGDSSVPAMSEEISFETLPLPSKDAYPHRIAFVGDLGLTS 199
Query: 186 NTTTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKS-SCYLCQSIESPIQETYQPRWDYW 244
NTTTT+ HLM N P L++++GDL+YA+ Y T G K C+ C ++PI+ETYQPRWD W
Sbjct: 200 NTTTTIDHLMENDPSLVIIVGDLTYANQYRTIGGKGVPCFSCSFPDAPIRETYQPRWDAW 259
Query: 245 GRYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGI 304
GR+M+PL S VPTMVIEG HEIE QA TF +YS RFA P+ ESGS+S+LYYSF+AGG+
Sbjct: 260 GRFMEPLTSKVPTMVIEGNHEIEPQASGITFKSYSERFAVPASESGSNSNLYYSFDAGGV 319
Query: 305 HFVMLSAYIDYDKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRV 364
HFVML AY+DY+ + QY WL+ DL VDR VTPWL+A HPPWY++YS+HY+E ECMR
Sbjct: 320 HFVMLGAYVDYNNTGLQYAWLKEDLSKVDRAVTPWLVATMHPPWYNSYSSHYQEFECMRQ 379
Query: 365 EMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDGGNVEGLDIVHADEP 424
EME+LLY Y VDIVF GHVHAYER NR+YNY+LDPCGPVYI +GDGGN+E +D+ AD+P
Sbjct: 380 EMEELLYQYRVDIVFAGHVHAYERMNRIYNYTLDPCGPVYITIGDGGNIEKVDVDFADDP 439
Query: 425 GNC 427
G C
Sbjct: 440 GKC 442
|
Acid phosphatase activity with ATP, ADP, dATP, pyrophosphate, polyphosphate, phosphoserine and phosphothreonine. Low or no activity with phosphotyrosine, AMP and phytate. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q8S340|PPA22_ARATH Purple acid phosphatase 22 OS=Arabidopsis thaliana GN=PAP22 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 277 bits (709), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 175/446 (39%), Positives = 234/446 (52%), Gaps = 93/446 (20%)
Query: 36 PYVLQNNAQGEGFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRV 95
P V +N + + P+Q+ +SL+ + D + +++IT + + V+S+V +
Sbjct: 34 PIVFVHNDRSKS-DPQQVHISLAGK-DHMRVTFITEDNK------------VESVVEYGK 79
Query: 96 FRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGIIHHVLITGLQPNTLYEYECGD--PSISA 153
+A G Y + Y SG IHHV I LQ NT Y Y CG P S
Sbjct: 80 QPGKYDGKATGECTSYKYFF-------YKSGKIHHVKIGPLQANTTYYYRCGGNGPEFS- 131
Query: 154 MSSSHYFRTMPVSGPSDYPNRIAVVGDLGLTYNTTTTVAHLMSNHPDLLLLIGDLSYADL 213
F+T PS +P A+VGDLG T T T++H+ S D+ LL GDLSYAD
Sbjct: 132 ------FKT----PPSTFPVEFAIVGDLGQTEWTAATLSHINSQDYDVFLLPGDLSYAD- 180
Query: 214 YLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIE--RQAE 271
T+QP WD +GR ++PL S P MV EG HEIE E
Sbjct: 181 ----------------------THQPLWDSFGRLVEPLASKRPWMVTEGNHEIEFFPIIE 218
Query: 272 NQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYIDYDKSSDQYKWLESDLGD 331
+ TF +Y++R+ P ES S+S+LYYSF+ G+H VML +Y D+D SDQY+WL++DL
Sbjct: 219 HTTFKSYNARWLMPHTESFSTSNLYYSFDVAGVHTVMLGSYTDFDCESDQYQWLQADLAK 278
Query: 332 VDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNR 391
VDR+ TPW++ H PWY+T AH E E MR ME LL+ VD+VF+GHVHAYER R
Sbjct: 279 VDRKTTPWVVVLLHAPWYNTNEAHEGEGESMREAMESLLFNARVDVVFSGHVHAYERFKR 338
Query: 392 VYNYSLDPCGPVYILVGDGGNVEGLDIVHADEPGNCPEPSTTPDMGGSCAFNFTSGPASG 451
VYN DPCGP++I +GDGGN EGL A +F P+
Sbjct: 339 VYNNKADPCGPIHITIGDGGNREGL------------------------ALSFKKPPSP- 373
Query: 452 KFCWDRQPDYSAYRESSFGHGILEVL 477
S +RESSFGHG L+V+
Sbjct: 374 ---------LSEFRESSFGHGRLKVM 390
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9LXI7|PPA20_ARATH Probable purple acid phosphatase 20 OS=Arabidopsis thaliana GN=PAP20 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 264 bits (675), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 174/433 (40%), Positives = 231/433 (53%), Gaps = 92/433 (21%)
Query: 50 PEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQ--AEGY 107
P+Q+ +SL D + ISWIT +ISP S+VY V S Y+ A G
Sbjct: 44 PDQVHISLVGP-DKMRISWITQS-----SISP-------SVVYGTV---SGKYEGSANGT 87
Query: 108 SLVYNQLYPPDGLQNYTSGIIHHVLITGLQPNTLYEYECGDPSISAMSSSHYFRTMPVSG 167
S Y+ L Y SG I+ V+I L+PNT+Y Y+CG PS + S FRT
Sbjct: 88 SSSYHYLLI------YRSGQINDVVIGPLKPNTVYYYKCGGPSSTQEFS---FRT----P 134
Query: 168 PSDYPNRIAVVGDLGLTYNTTTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQ 227
PS +P + AV GDLG + + +T+ H+ D+ +L GDLSYA++Y
Sbjct: 135 PSKFPIKFAVSGDLGTSEWSKSTLEHVSKWDYDVFILPGDLSYANMY------------- 181
Query: 228 SIESPIQETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIERQ--AENQTFAAYSSRFAFP 285
QP WD +GR +QPL S P MV G HE+E+ + F AY+ R+ P
Sbjct: 182 ----------QPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPILHSNPFTAYNKRWRMP 231
Query: 286 SEESGSSSSLYYSFNAGGIHFVMLSAYIDYDKSSDQYKWLESDLGDVDREVTPWLIAAWH 345
EESGSSS+LYYSFN G+H +ML +Y D++ S+QY+WLE++L +DR+ TPW++A H
Sbjct: 232 FEESGSSSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVH 291
Query: 346 PPWYSTYSAHYREVEC--MRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPV 403
PWY++ AH E E M+ ME LLY VD+VF GHVHAYER +RVY D CGPV
Sbjct: 292 APWYNSNEAHQGEKESVEMKESMETLLYKARVDLVFAGHVHAYERFSRVYQDKFDKCGPV 351
Query: 404 YILVGDGGNVEGLDIVHADEPGNCPEPSTTPDMGGSCAFNFTSGPASGKFCWDRQPDYSA 463
YI +GDGGN+EGL + D P+ S
Sbjct: 352 YINIGDGGNLEGLATKYRDP----------------------------------NPEISL 377
Query: 464 YRESSFGHGILEV 476
+RE+SFGHG L V
Sbjct: 378 FREASFGHGQLVV 390
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9LXI4|PPA21_ARATH Purple acid phosphatase 21 OS=Arabidopsis thaliana GN=PAP21 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 260 bits (664), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 164/432 (37%), Positives = 211/432 (48%), Gaps = 88/432 (20%)
Query: 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGY 107
F P+Q+ +SL+ + D + +++ T + + S+V + + G
Sbjct: 49 FYPQQVHISLAGK-DHMRVTYTTDDLNVA------------SMVEYGKHPKKYDKKTAGE 95
Query: 108 SLVYNQLYPPDGLQNYTSGIIHHVLITGLQPNTLYEYECGDPSISAMSSSHYFRTMPVSG 167
S Y + Y SG IHHV I L+PNT Y Y CG F+T
Sbjct: 96 STSYTYFF-------YNSGKIHHVKIGPLKPNTKYYYRCG-----GHGDEFSFKT----P 139
Query: 168 PSDYPNRIAVVGDLGLTYNTTTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQ 227
PS +P AV GDLG T T T+ + D+ LL GDLSYAD
Sbjct: 140 PSKFPIEFAVAGDLGQTDWTVRTLDQIRKRDFDVFLLPGDLSYAD--------------- 184
Query: 228 SIESPIQETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIERQAENQ--TFAAYSSRFAFP 285
T+QP WD +GR ++ L S P MV EG HEIE N +F +Y++R+ P
Sbjct: 185 --------THQPLWDSFGRLLETLASTRPWMVTEGNHEIESFPTNDHISFKSYNARWLMP 236
Query: 286 SEESGSSSSLYYSFNAGGIHFVMLSAYIDYDKSSDQYKWLESDLGDVDREVTPWLIAAWH 345
ES S S+LYYSF+ G+H VML +Y Y+ SDQY WL++DL VDR+ TPWL+ H
Sbjct: 237 HAESLSHSNLYYSFDVAGVHTVMLGSYTPYESHSDQYHWLQADLRKVDRKKTPWLVVVMH 296
Query: 346 PPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPVYI 405
PWYST AHY E E MR +E LLY VD+VF GHVH YER +YN DPCGP+YI
Sbjct: 297 TPWYSTNKAHYGEGEKMRSALESLLYRAQVDVVFAGHVHTYERFKPIYNKKADPCGPMYI 356
Query: 406 LVGDGGNVEGLDIVHADEPGNCPEPSTTPDMGGSCAFNFTSGPASGKFCWDRQPDYSAYR 465
+GDGGN EGL A F Q S +R
Sbjct: 357 TIGDGGNREGL------------------------ALRFKKP----------QSPLSEFR 382
Query: 466 ESSFGHGILEVL 477
ESSFGHG L ++
Sbjct: 383 ESSFGHGRLRII 394
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9LJU7|PPA18_ARATH Purple acid phosphatase 18 OS=Arabidopsis thaliana GN=PAP18 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 255 bits (652), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 166/431 (38%), Positives = 221/431 (51%), Gaps = 87/431 (20%)
Query: 50 PEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSL 109
PEQ+ +SL+ + ++W+T D SP S V + +Y +G S
Sbjct: 47 PEQVHISLAGD-KHMRVTWVTN-----DKSSP-------SFVEYGTSPGKYSYLGQGEST 93
Query: 110 VYNQLYPPDGLQNYTSGIIHHVLITGLQPNTLYEYECGDPSISAMSSSHYFRTMPVSGPS 169
Y+ + Y SG IHH +I L+ +T+Y Y CG + P P+
Sbjct: 94 SYSYIM-------YRSGKIHHTVIGPLEADTVYYYRCGG------EGPEFHLKTP---PA 137
Query: 170 DYPNRIAVVGDLGLTYNTTTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSI 229
+P AV GDLG T T +T+ H+ + LL GDLSYAD
Sbjct: 138 QFPITFAVAGDLGQTGWTKSTLDHIDQCKYAVHLLPGDLSYADYM--------------- 182
Query: 230 ESPIQETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIERQA-ENQTFAAYSSRFAFPSEE 288
Q +WD +G +QPL S P MV +G HE E F +++SR+ P EE
Sbjct: 183 --------QHKWDTFGELVQPLASVRPWMVTQGNHEKESIPFIVDEFVSFNSRWKMPYEE 234
Query: 289 SGSSSSLYYSFNAGGIHFVMLSAYIDYDKSSDQYKWLESDLGDVDREVTPWLIAAWHPPW 348
SGS+S+LYYSF G+H +ML +Y DYD+ SDQY WL++DL VDRE TPWLI +H PW
Sbjct: 235 SGSNSNLYYSFEVAGVHAIMLGSYTDYDRYSDQYSWLKADLSKVDRERTPWLIVLFHVPW 294
Query: 349 YSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVG 408
Y++ +AH E + M EME LLY GVDIVF GHVHAYER+ RV N DPCGPV+I +G
Sbjct: 295 YNSNNAHQHEGDEMMAEMEPLLYASGVDIVFTGHVHAYERTKRVNNGKSDPCGPVHITIG 354
Query: 409 DGGNVEGLDIVHADEPGNCPEPSTTPDMGGSCAFNFTSGPASGKFCWDRQPDYSAYRESS 468
DGGN EGL + D PS P++S +RE+S
Sbjct: 355 DGGNREGLARKYKD-------PS---------------------------PEWSVFREAS 380
Query: 469 FGHGILEVLIS 479
FGHG L+++ S
Sbjct: 381 FGHGELQMVNS 391
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9C510|PPA6_ARATH Purple acid phosphatase 6 OS=Arabidopsis thaliana GN=PAP6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 225 bits (573), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 142/372 (38%), Positives = 190/372 (51%), Gaps = 74/372 (19%)
Query: 122 NYTSGIIHHVLITGLQPNTLYEYECG-DPSISAMSSSHYFRTMPVSGPSDYPNRIAVVGD 180
+Y+SG +HH I GL+ +T Y YE G D S+ S F T P GP D P ++GD
Sbjct: 110 DYSSGFLHHATIKGLEYDTKYIYEVGTDKSVRQFS----FTTPPKIGP-DVPYTFGIIGD 164
Query: 181 LGLTYNTTTTVAHLMSN-HPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQP 239
LG TY + T+ H MSN +L GDLSYAD + P + Q
Sbjct: 165 LGQTYASNETLYHYMSNPKGQAVLFAGDLSYAD-----------------DHPNHD--QR 205
Query: 240 RWDYWGRYMQPLVSNVPTMVIEGEHEIE---RQAENQTFAAYSSRFAFPSEESGSSSSLY 296
+WD WGR+M+P + P + G HEI+ E F Y+ R+ + S S+S L+
Sbjct: 206 KWDTWGRFMEPCAAYQPFIFAAGNHEIDFVPNIGEPHAFKPYTHRYPNAYKASQSTSPLW 265
Query: 297 YSFNAGGIHFVMLSAYIDYDKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHY 356
YS H ++LS+Y Y K + QY WLE +L +V+RE TPWLI H PWY++ + HY
Sbjct: 266 YSVRRASAHIIVLSSYSAYGKYTPQYIWLEQELKNVNREETPWLIVIVHSPWYNSNNYHY 325
Query: 357 REVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYN--YSL---------DPCGPVYI 405
E E MRV E L VD+V +GHVHAYERS R+ N Y++ DP P+YI
Sbjct: 326 MEGESMRVMFESWLVNSKVDLVLSGHVHAYERSERISNIKYNITNGLSSPVKDPNAPIYI 385
Query: 406 LVGDGGNVEGLDIVHADEPGNCPEPSTTPDMGGSCAFNFTSGPASGKFCWDRQPDYSAYR 465
+GDGGN+EG+ + F D QP YSAYR
Sbjct: 386 TIGDGGNIEGI---------------------------------ANSFV-DPQPSYSAYR 411
Query: 466 ESSFGHGILEVL 477
E+SFGH +LE++
Sbjct: 412 EASFGHAVLEIM 423
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9SDZ9|PPAF2_IPOBA Purple acid phosphatase 2 OS=Ipomoea batatas GN=PAP2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 218 bits (556), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 137/371 (36%), Positives = 184/371 (49%), Gaps = 73/371 (19%)
Query: 122 NYTSGIIHHVLITGLQPNTLYEYECGDPSISAMSSSHYFRTMPVSGPSDYPNRIAVVGDL 181
NYTSG IHH I L+ NT Y YE G I + S +F T P GP D P ++GDL
Sbjct: 110 NYTSGYIHHCTIRNLEYNTKYYYEVG---IGNTTRSFWFTTPPEVGP-DVPYTFGLIGDL 165
Query: 182 GLTYNTTTTVAHLMSN--HPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQP 239
G ++++ T+ H N +L +GDLSYAD Y +
Sbjct: 166 GQSFDSNRTLTHYERNPIKGQAVLFVGDLSYADNYPNHD-------------------NV 206
Query: 240 RWDYWGRYMQPLVSNVPTMVIEGEHEIE---RQAENQTFAAYSSRFAFPSEESGSSSSLY 296
RWD WGR+++ + P + G HEI+ E + F ++ R+ P + SGS+ + +
Sbjct: 207 RWDTWGRFVERSTAYQPWIWTAGNHEIDFAPEIGETKPFKPFTKRYHVPYKASGSTETFW 266
Query: 297 YSFNAGGIHFVMLSAYIDYDKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHY 356
Y + ++LS+Y Y K + QYKWLE +L V+R TPWLI H PWY++Y+ HY
Sbjct: 267 YPIKRASAYIIVLSSYSAYGKYTPQYKWLEEELPKVNRTETPWLIVLMHSPWYNSYNYHY 326
Query: 357 REVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSL-----------DPCGPVYI 405
E E MRV E + VD+VF GHVHAYERS RV N + D PVYI
Sbjct: 327 MEGETMRVMYEPWFVQHKVDLVFAGHVHAYERSERVSNVAYDIVNGKCTPVRDQSAPVYI 386
Query: 406 LVGDGGNVEGLDIVHADEPGNCPEPSTTPDMGGSCAFNFTSGPASGKFCWDRQPDYSAYR 465
+GDGGN+EGL A N T D QP+YSA+R
Sbjct: 387 TIGDGGNLEGL------------------------ATNMT----------DPQPEYSAFR 412
Query: 466 ESSFGHGILEV 476
E+SFGH L++
Sbjct: 413 EASFGHATLDI 423
|
Ipomoea batatas (taxid: 4120) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9SIV9|PPA10_ARATH Purple acid phosphatase 10 OS=Arabidopsis thaliana GN=PAP10 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 145/444 (32%), Positives = 207/444 (46%), Gaps = 93/444 (20%)
Query: 50 PEQIFVSLS-ARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYS 108
P+Q+ ++ +V +SW+T E + G N ++Y++ S+ ++A G +
Sbjct: 59 PQQVHITQGDVEGKAVIVSWVTQEAK-GSN----------KVIYWKE-NSTKKHKAHGKT 106
Query: 109 LVYNQLYPPDGLQNYTSGIIHHVLITGLQPNTLYEYECGDPSISAMSSSHYFRTMPVSGP 168
Y NYTSG IHH I L+ +T Y Y G + +F T P GP
Sbjct: 107 NTYK-------FYNYTSGFIHHCPIRNLEYDTKYYYVLG---VGQTERKFWFFTPPEIGP 156
Query: 169 SDYPNRIAVVGDLGLTYNTTTTVAHLMSN--HPDLLLLIGDLSYADLYLTNGTKSSCYLC 226
D P ++GDLG +Y++ T+ H +N +L +GD+SYAD Y + +
Sbjct: 157 -DVPYTFGLIGDLGQSYDSNITLTHYENNPTKGQAVLFVGDISYADTYPDHDNR------ 209
Query: 227 QSIESPIQETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIE---RQAENQTFAAYSSRFA 283
RWD WGR+ + + P + G HE++ EN+ F ++ R+
Sbjct: 210 -------------RWDSWGRFAERSTAYQPWIWTTGNHELDFAPEIGENRPFKPFTHRYR 256
Query: 284 FPSEESGSSSSLYYSFNAGGIHFVMLSAYIDYDKSSDQYKWLESDLGDVDREVTPWLIAA 343
P SGS+ +YS G + ++L++Y Y K + QY+WLE + V+R TPWLI
Sbjct: 257 TPYRSSGSTEPFWYSIKRGPAYIIVLASYSAYGKYTPQYQWLEEEFPKVNRTETPWLIVL 316
Query: 344 WHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSL------ 397
H PWY++Y HY E E MRV E Y VD+VF GHVHAYERS RV N +
Sbjct: 317 MHSPWYNSYDYHYMEGETMRVMYEAWFVKYKVDVVFAGHVHAYERSERVSNIAYNVVNGI 376
Query: 398 -----DPCGPVYILVGDGGNVEGLDIVHADEPGNCPEPSTTPDMGGSCAFNFTSGPASGK 452
D PVYI +GDGGN+EGL EP
Sbjct: 377 CTPVKDQSAPVYITIGDGGNIEGL-ATKMTEP---------------------------- 407
Query: 453 FCWDRQPDYSAYRESSFGHGILEV 476
QP YSA+RE+SFGH I +
Sbjct: 408 -----QPKYSAFREASFGHAIFSI 426
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 487 | ||||||
| 356569147 | 582 | PREDICTED: purple acid phosphatase 15-li | 0.969 | 0.810 | 0.769 | 0.0 | |
| 357462713 | 693 | Purple acid phosphatase [Medicago trunca | 0.958 | 0.673 | 0.756 | 0.0 | |
| 357462711 | 543 | Purple acid phosphatase [Medicago trunca | 0.958 | 0.860 | 0.761 | 0.0 | |
| 62177683 | 543 | phytase [Medicago truncatula] | 0.958 | 0.860 | 0.759 | 0.0 | |
| 359477949 | 537 | PREDICTED: purple acid phosphatase 15-li | 0.989 | 0.897 | 0.715 | 0.0 | |
| 449442385 | 547 | PREDICTED: purple acid phosphatase 15-li | 0.954 | 0.850 | 0.753 | 0.0 | |
| 224141249 | 542 | predicted protein [Populus trichocarpa] | 0.971 | 0.872 | 0.720 | 0.0 | |
| 255554090 | 566 | acid phosphatase, putative [Ricinus comm | 0.956 | 0.823 | 0.729 | 0.0 | |
| 145839433 | 551 | purple acid phosphatase [Nicotiana tabac | 0.956 | 0.845 | 0.716 | 0.0 | |
| 225469592 | 540 | PREDICTED: purple acid phosphatase 15 [V | 0.960 | 0.866 | 0.707 | 0.0 |
| >gi|356569147|ref|XP_003552767.1| PREDICTED: purple acid phosphatase 15-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/482 (76%), Positives = 404/482 (83%), Gaps = 10/482 (2%)
Query: 1 CVDGDAIGIPTTLEGPFKPVTAPLDKNLRLNVSDL----PYVLQNNAQGEGFQPEQIFVS 56
CV D G+PTTL+GPFKPVT PLD++ R N DL P V + EGFQPEQI +S
Sbjct: 14 CVIVDG-GVPTTLDGPFKPVTVPLDQSFRGNAVDLTDTDPLVQRTV---EGFQPEQISLS 69
Query: 57 LSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYP 116
LSA +DSVWISWITGEFQIGDNI PLDPE V SIV + F S+ +QA GYSLVY+QLYP
Sbjct: 70 LSASHDSVWISWITGEFQIGDNIEPLDPETVASIVQYGRFGRSMRHQATGYSLVYSQLYP 129
Query: 117 PDGLQNYTSGIIHHVLITGLQPNTLYEYECGDPSISAMSSSHYFRTMPVSGPSDYPNRIA 176
+GLQNYTSGIIHHV +TGL+PNTLY+Y+CGDPS+S MS HYFRTMP SGP YP+RIA
Sbjct: 130 FEGLQNYTSGIIHHVRLTGLRPNTLYQYKCGDPSLSGMSDVHYFRTMPASGPKSYPSRIA 189
Query: 177 VVGDLGLTYNTTTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQET 236
VVGDLGLTYNTT+TV H+ SNHPDL+LL+GD+S A+LYLTNGT + CY C +PI ET
Sbjct: 190 VVGDLGLTYNTTSTVNHMTSNHPDLILLVGDVSCANLYLTNGTGADCYSCSFPNTPIHET 249
Query: 237 YQPRWDYWGRYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLY 296
YQPRWDYWGRYMQPL+S+VP MVIEG HEIE QAENQTF AYSSRFAFPSEESGSSS+ Y
Sbjct: 250 YQPRWDYWGRYMQPLISSVPIMVIEGNHEIEEQAENQTFVAYSSRFAFPSEESGSSSTFY 309
Query: 297 YSFNAGGIHFVMLSAYIDYDKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHY 356
YSFNAGGIHF+ML AYI YDKS DQYKWLE DL VDREVTPWLIA WH PWYSTY AHY
Sbjct: 310 YSFNAGGIHFIMLGAYISYDKSGDQYKWLERDLASVDREVTPWLIATWHAPWYSTYKAHY 369
Query: 357 REVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDGGNVEGL 416
RE ECMRVEMEDLLY YGVDIVFNGHVHAYERSNRVYNY+LDPCGPVYI VGDGGN E +
Sbjct: 370 REAECMRVEMEDLLYKYGVDIVFNGHVHAYERSNRVYNYTLDPCGPVYITVGDGGNREKM 429
Query: 417 DIVHADEPGNCPEPSTTPD--MGGSCAFNFTSGPASGKFCWDRQPDYSAYRESSFGHGIL 474
I HADEPG CPEPSTTPD MGG CAFNFTSGPA G FCWDRQPDYSA+RESSFGHGIL
Sbjct: 430 AITHADEPGQCPEPSTTPDDYMGGFCAFNFTSGPAEGNFCWDRQPDYSAFRESSFGHGIL 489
Query: 475 EV 476
EV
Sbjct: 490 EV 491
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357462713|ref|XP_003601638.1| Purple acid phosphatase [Medicago truncatula] gi|355490686|gb|AES71889.1| Purple acid phosphatase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 764 bits (1973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/484 (75%), Positives = 406/484 (83%), Gaps = 17/484 (3%)
Query: 8 GIPTTLEGPFKPVTAPLDKNLRLNVSDLPY---VLQNNAQGEGFQPEQIFVSLSARYDSV 64
G+PTTL+GPFKPVT PLDK+ R N D+P ++Q N E FQPEQI +SLS +DSV
Sbjct: 28 GVPTTLDGPFKPVTVPLDKSFRGNAVDIPDTDPLVQRNV--EAFQPEQISLSLSTSHDSV 85
Query: 65 WISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYT 124
WISWITGEFQIG+NI PLDPE V SIV + F S+ QA GYSLVY+QLYP +GLQNYT
Sbjct: 86 WISWITGEFQIGENIEPLDPETVDSIVQYGRFGRSMNVQAVGYSLVYSQLYPFEGLQNYT 145
Query: 125 SGIIHHVLITGLQPNTLYEYECGDPSISAMSSSHYFRTMPVSGPSDYPNRIAVVGDLGLT 184
SGIIHHV +TGL+PNTLY+Y+CGDPS+ AMS HYFRTMPVSGP YP+RIAVVGDLGLT
Sbjct: 146 SGIIHHVRLTGLKPNTLYQYQCGDPSLPAMSDVHYFRTMPVSGPKSYPSRIAVVGDLGLT 205
Query: 185 YNTTTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYW 244
YNTT+TV H+ NHPDL+LL+GD+SYA+LYLTNGT S CY C SPIQETYQPRWDYW
Sbjct: 206 YNTTSTVNHMTGNHPDLILLVGDVSYANLYLTNGTGSDCYSCSFSNSPIQETYQPRWDYW 265
Query: 245 GRYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGI 304
GRYM+PL+++VP MV+EG HEIE QAEN+TF AYSSRFAFPSEESGSSS+ YYSFNAGGI
Sbjct: 266 GRYMEPLIASVPIMVVEGNHEIEEQAENKTFVAYSSRFAFPSEESGSSSTFYYSFNAGGI 325
Query: 305 HFVMLSAYIDYDKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRV 364
HF+ML AYI YDKS DQYKWLE DL +DREVTPWL+A WH PWYSTY AHYREVECMRV
Sbjct: 326 HFIMLGAYISYDKSGDQYKWLEKDLASLDREVTPWLVATWHAPWYSTYIAHYREVECMRV 385
Query: 365 EMEDLLYYYGVDIVFNGH----------VHAYERSNRVYNYSLDPCGPVYILVGDGGNVE 414
EMEDLLY YGVDIVFNGH VHAYERSNRVYNY+LDPCGPVYI VGDGGN E
Sbjct: 386 EMEDLLYKYGVDIVFNGHIQNSHENIEQVHAYERSNRVYNYTLDPCGPVYITVGDGGNRE 445
Query: 415 GLDIVHADEPGNCPEPSTTPD--MGGSCAFNFTSGPASGKFCWDRQPDYSAYRESSFGHG 472
+ I HADEPGNCPEPSTTPD MGG CAFNFTSGPA+GKFCWD+QPDYSA+RESSFGHG
Sbjct: 446 KMAIAHADEPGNCPEPSTTPDKFMGGFCAFNFTSGPAAGKFCWDQQPDYSAFRESSFGHG 505
Query: 473 ILEV 476
ILEV
Sbjct: 506 ILEV 509
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357462711|ref|XP_003601637.1| Purple acid phosphatase [Medicago truncatula] gi|355490685|gb|AES71888.1| Purple acid phosphatase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 761 bits (1966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/474 (76%), Positives = 404/474 (85%), Gaps = 7/474 (1%)
Query: 8 GIPTTLEGPFKPVTAPLDKNLRLNVSDLPY---VLQNNAQGEGFQPEQIFVSLSARYDSV 64
G+PTTL+GPFKPVT PLDK+ R N D+P ++Q N E FQPEQI +SLS +DSV
Sbjct: 28 GVPTTLDGPFKPVTVPLDKSFRGNAVDIPDTDPLVQRNV--EAFQPEQISLSLSTSHDSV 85
Query: 65 WISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYT 124
WISWITGEFQIG+NI PLDPE V SIV + F S+ QA GYSLVY+QLYP +GLQNYT
Sbjct: 86 WISWITGEFQIGENIEPLDPETVGSIVQYGRFGRSMNGQAVGYSLVYSQLYPFEGLQNYT 145
Query: 125 SGIIHHVLITGLQPNTLYEYECGDPSISAMSSSHYFRTMPVSGPSDYPNRIAVVGDLGLT 184
SGIIHHV +TGL+PNTLY+Y+CGDPS+SAMS HYFRTMPVSGP YP+RIAVVGDLGLT
Sbjct: 146 SGIIHHVRLTGLKPNTLYQYQCGDPSLSAMSDVHYFRTMPVSGPKSYPSRIAVVGDLGLT 205
Query: 185 YNTTTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYW 244
YNTT+TV H++SNHPDL+LL+GD SYA++YLTNGT S CY C +PI ETYQPRWDYW
Sbjct: 206 YNTTSTVNHMISNHPDLILLVGDASYANMYLTNGTGSDCYSCSFSNTPIHETYQPRWDYW 265
Query: 245 GRYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGI 304
GRYM+PL+S+VP MV+EG HEIE QAEN+TF AYSSRFAFPSEESGSSS+LYYSFNAGGI
Sbjct: 266 GRYMEPLISSVPVMVVEGNHEIEEQAENKTFVAYSSRFAFPSEESGSSSTLYYSFNAGGI 325
Query: 305 HFVMLSAYIDYDKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRV 364
HF+ML +YI YDKS DQYKWLE DL +DREVTPWL+A WH PWYSTY +HYRE ECMRV
Sbjct: 326 HFIMLGSYISYDKSGDQYKWLEKDLASLDREVTPWLVATWHAPWYSTYKSHYREAECMRV 385
Query: 365 EMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDGGNVEGLDIVHADEP 424
MEDLLY YGVDIVFNGHVHAYERSNRVYNY+LDPCGPVYI VGDGGN E + I HADEP
Sbjct: 386 NMEDLLYKYGVDIVFNGHVHAYERSNRVYNYTLDPCGPVYITVGDGGNREKMAITHADEP 445
Query: 425 GNCPEPSTTPD--MGGSCAFNFTSGPASGKFCWDRQPDYSAYRESSFGHGILEV 476
GNCPEP TTPD M G CAFNFTSGPA+GKFCWD+QPDYSA+RESSFGHGILEV
Sbjct: 446 GNCPEPLTTPDKFMRGFCAFNFTSGPAAGKFCWDQQPDYSAFRESSFGHGILEV 499
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|62177683|gb|AAX71115.1| phytase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 759 bits (1959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/474 (75%), Positives = 403/474 (85%), Gaps = 7/474 (1%)
Query: 8 GIPTTLEGPFKPVTAPLDKNLRLNVSDLPY---VLQNNAQGEGFQPEQIFVSLSARYDSV 64
G+PTTL+GPFKPVT PLDK+ R N D+P ++Q N E FQPEQI +SLS +DSV
Sbjct: 28 GVPTTLDGPFKPVTVPLDKSFRGNAVDIPDTDPLVQRNV--EAFQPEQISLSLSTSHDSV 85
Query: 65 WISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYT 124
WISWITGEFQIG+NI PLDPE V SIV + F S+ QA GYSLVY+QLYP +GLQNYT
Sbjct: 86 WISWITGEFQIGENIEPLDPETVGSIVQYGRFGRSMNGQAVGYSLVYSQLYPFEGLQNYT 145
Query: 125 SGIIHHVLITGLQPNTLYEYECGDPSISAMSSSHYFRTMPVSGPSDYPNRIAVVGDLGLT 184
SGIIHHV +TGL+PNTLY+Y+CGDPS+SAMS HYFRTMPVSGP YP+RIAVVGDLGLT
Sbjct: 146 SGIIHHVRLTGLKPNTLYQYQCGDPSLSAMSDVHYFRTMPVSGPKSYPSRIAVVGDLGLT 205
Query: 185 YNTTTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYW 244
YNTT+TV H++SNHPDL+LL+GD SYA++YLTNGT S CY C +PI ETYQPRWDYW
Sbjct: 206 YNTTSTVNHMISNHPDLILLVGDASYANMYLTNGTGSDCYSCSFSNTPIHETYQPRWDYW 265
Query: 245 GRYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGI 304
GRYM+PL+S+VP MV+EG HEIE QA N+TF AYSSRFAFPSEESGSSS+LYYSFNAGGI
Sbjct: 266 GRYMEPLISSVPVMVVEGNHEIEEQAVNKTFVAYSSRFAFPSEESGSSSTLYYSFNAGGI 325
Query: 305 HFVMLSAYIDYDKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRV 364
HF+ML +YI YDKS DQYKWLE DL +DREVTPWL+A WH PWYSTY +HYRE ECMRV
Sbjct: 326 HFIMLGSYISYDKSGDQYKWLEKDLASLDREVTPWLVATWHAPWYSTYKSHYREAECMRV 385
Query: 365 EMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDGGNVEGLDIVHADEP 424
MEDLLY YGVDIVFNGHVHAYERSNRVYNY+LDPCGPVYI VGDGGN E + I HADEP
Sbjct: 386 NMEDLLYKYGVDIVFNGHVHAYERSNRVYNYTLDPCGPVYITVGDGGNREKMAITHADEP 445
Query: 425 GNCPEPSTTPD--MGGSCAFNFTSGPASGKFCWDRQPDYSAYRESSFGHGILEV 476
GNCPEP TTPD M G CAFNFTSGPA+GKFCWD+QPDYSA+RESSFGHGILEV
Sbjct: 446 GNCPEPLTTPDKFMRGFCAFNFTSGPAAGKFCWDQQPDYSAFRESSFGHGILEV 499
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359477949|ref|XP_002265845.2| PREDICTED: purple acid phosphatase 15-like [Vitis vinifera] gi|298205249|emb|CBI17308.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 745 bits (1923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/492 (71%), Positives = 409/492 (83%), Gaps = 10/492 (2%)
Query: 1 CVDGDAIGIPTTLEGPFKPVTAPLDKNLRLNVSDLPYV---LQNNAQGEGFQPEQIFVSL 57
CVDGD GIPTTL+GPFKPVT PLD + R N DLP+ LQ QG F+PEQI V+L
Sbjct: 21 CVDGD--GIPTTLDGPFKPVTVPLDTSFRGNAVDLPHTDPRLQRTVQG--FEPEQISVTL 76
Query: 58 SARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPP 117
SA YDSVWISW+TGEFQIGDNI PLDP+ V S V++ + L + + G+SLVYNQLYP
Sbjct: 77 SATYDSVWISWVTGEFQIGDNIKPLDPKSVASQVFYGKKKHRLVHMSNGHSLVYNQLYPF 136
Query: 118 DGLQNYTSGIIHHVLITGLQPNTLYEYECGDPSISAMSSSHYFRTMPVSGPSDYPNRIAV 177
+GLQNYTSGIIHHV +TGL+P T+Y Y+CGD SI A+S H+F+TM SGP YPNRIAV
Sbjct: 137 EGLQNYTSGIIHHVRLTGLKPETVYYYQCGDASIPALSDIHHFKTMVASGPRGYPNRIAV 196
Query: 178 VGDLGLTYNTTTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETY 237
VGDLGLTYNTT+T++HLMSN+PDL++ +GD+ YA++YLTNGT S CY C ++PI ETY
Sbjct: 197 VGDLGLTYNTTSTISHLMSNNPDLIVFVGDVCYANMYLTNGTGSDCYSCSFSQTPIHETY 256
Query: 238 QPRWDYWGRYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYY 297
QPRWDYWGR+MQPL+S +P MV+EG HEIE QAENQTF AYSSRFAFPS+ESGSSS+ YY
Sbjct: 257 QPRWDYWGRFMQPLISKIPIMVVEGNHEIEEQAENQTFVAYSSRFAFPSKESGSSSTFYY 316
Query: 298 SFNAGGIHFVMLSAYIDYDKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYR 357
SFNAGGIHF+ML AYI YDKS +QYKWLE DL VDR+VTPW++A WHPPWYSTY AHYR
Sbjct: 317 SFNAGGIHFIMLGAYISYDKSGEQYKWLERDLKKVDRKVTPWMVATWHPPWYSTYKAHYR 376
Query: 358 EVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDGGNVEGLD 417
E ECMRV +EDLLY YGVDIVF+GHVHAYERSNRVYNY+LDPCGPV+I VGDGGN E +
Sbjct: 377 EAECMRVALEDLLYNYGVDIVFSGHVHAYERSNRVYNYTLDPCGPVHITVGDGGNREKMA 436
Query: 418 IVHADEPGNCPEPSTTPD--MGGSCAFNFTSGPASGKFCWDRQPDYSAYRESSFGHGILE 475
I HADE G CPEPSTTPD MGG CAFNFTSGPA+G+FCWDRQPDYSAYRE+SFGHGILE
Sbjct: 437 IPHADEHGQCPEPSTTPDKYMGGFCAFNFTSGPAAGRFCWDRQPDYSAYRETSFGHGILE 496
Query: 476 VLISLSIALTTF 487
+ + ++AL T+
Sbjct: 497 -MKNETVALWTW 507
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449442385|ref|XP_004138962.1| PREDICTED: purple acid phosphatase 15-like [Cucumis sativus] gi|449505298|ref|XP_004162428.1| PREDICTED: purple acid phosphatase 15-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 741 bits (1914), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/475 (75%), Positives = 400/475 (84%), Gaps = 10/475 (2%)
Query: 9 IPTTLEGPFKPVTAPLDKNLRLNVSDLP----YVLQNNAQGEGFQPEQIFVSLSARYDSV 64
IP+T EGPFKPVT PLDK+ R DLP V +N AQ FQPEQI VSLS YDSV
Sbjct: 26 IPSTAEGPFKPVTIPLDKSFRGVAEDLPETDPRVQKNGAQ---FQPEQISVSLSVDYDSV 82
Query: 65 WISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYT 124
WISWITG+FQIGD+I PLDPE V SIV + F + QAEGYSL+YNQLYP +GL+NYT
Sbjct: 83 WISWITGDFQIGDDIQPLDPEEVASIVMYGKFSMPMDNQAEGYSLIYNQLYPFEGLRNYT 142
Query: 125 SGIIHHVLITGLQPNTLYEYECGDPSISA-MSSSHYFRTMPVSGPSDYPNRIAVVGDLGL 183
SGIIHHV +TGL+P+TLY+Y+CGDPS++ MS ++FRTMPVSGP YPNRIAVVGDLGL
Sbjct: 143 SGIIHHVRLTGLEPDTLYQYQCGDPSVAEEMSDVYFFRTMPVSGPKSYPNRIAVVGDLGL 202
Query: 184 TYNTTTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDY 243
TYNTT+TV H++SNHPDL+LLIGD+SYA+LYLTNGT S CY C E+PI ETYQPRWD+
Sbjct: 203 TYNTTSTVNHILSNHPDLVLLIGDVSYANLYLTNGTGSDCYSCSFPETPIHETYQPRWDF 262
Query: 244 WGRYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGG 303
WGRYMQPLVS VP MV+EG HEIE QAENQTFAAYSSRF+FPSEES S S+ YYSFNAGG
Sbjct: 263 WGRYMQPLVSEVPLMVVEGNHEIEPQAENQTFAAYSSRFSFPSEESNSYSTFYYSFNAGG 322
Query: 304 IHFVMLSAYIDYDKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMR 363
IHF+ML AYI YDKSSDQYKWLE DL VDR+VTPWLIA WHPPWYS+Y+AHYRE ECM+
Sbjct: 323 IHFIMLGAYISYDKSSDQYKWLEQDLAKVDRKVTPWLIATWHPPWYSSYTAHYREAECMK 382
Query: 364 VEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDGGNVEGLDIVHADE 423
+ MEDLLY Y VDIVFNGHVHAYERSNRVY+Y+LD CGPVYI VGDGGN E + I HADE
Sbjct: 383 MAMEDLLYKYKVDIVFNGHVHAYERSNRVYDYTLDRCGPVYITVGDGGNREKMAIEHADE 442
Query: 424 PGNCPEPSTTPD--MGGSCAFNFTSGPASGKFCWDRQPDYSAYRESSFGHGILEV 476
PGNCP+P +TPD MGG CAFNFTSGPA GKFCWD+QPDYSAYRESSFGHGILEV
Sbjct: 443 PGNCPDPFSTPDEYMGGFCAFNFTSGPAEGKFCWDQQPDYSAYRESSFGHGILEV 497
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224141249|ref|XP_002323987.1| predicted protein [Populus trichocarpa] gi|222866989|gb|EEF04120.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 740 bits (1911), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/480 (72%), Positives = 396/480 (82%), Gaps = 7/480 (1%)
Query: 2 VDGDAIGIPTTLEGPFKPVTAPLDKNLRLNVSDLPYV---LQNNAQGEGFQPEQIFVSLS 58
D +GIPTTL+GPFKPVT PLDK R + DLP +Q QG F+PEQI VSLS
Sbjct: 21 TDNIVVGIPTTLDGPFKPVTVPLDKTFRGHAVDLPDTDPRVQRVVQG--FEPEQISVSLS 78
Query: 59 ARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPD 118
+DSVWISWITG+FQIGD I PL+P+ V S+V + R L ++A GYSLVYNQLYP
Sbjct: 79 TTHDSVWISWITGDFQIGDRIKPLNPKTVASVVRYGRLRIPLIHKATGYSLVYNQLYPFV 138
Query: 119 GLQNYTSGIIHHVLITGLQPNTLYEYECGDPSISAMSSSHYFRTMPVSGPSDYPNRIAVV 178
GLQNYTSGIIHHV +TGL+PNTLY Y+CGDPSI AMSS +YF+TMP SGP YP+RIA+V
Sbjct: 139 GLQNYTSGIIHHVRLTGLKPNTLYHYQCGDPSIPAMSSKYYFKTMPASGPKSYPSRIAIV 198
Query: 179 GDLGLTYNTTTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQ 238
GDLGLTYNTT+TV H++ N+PDL+LL+GD+ YA+LYLTNGT + CY C ++PI ETYQ
Sbjct: 199 GDLGLTYNTTSTVDHVIGNNPDLILLVGDVCYANLYLTNGTGADCYSCSFSQTPIHETYQ 258
Query: 239 PRWDYWGRYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYS 298
PRWDYWGRYMQP+ S +P MV+EG HEIE+Q ENQTF AYSSRFAFPS+ESGSSS+ YYS
Sbjct: 259 PRWDYWGRYMQPVTSKIPIMVVEGNHEIEKQVENQTFVAYSSRFAFPSKESGSSSTFYYS 318
Query: 299 FNAGGIHFVMLSAYIDYDKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYRE 358
FNAGGIHF+ML YI Y+KS+ QYKWL+ DL VDR+VTPWL+A WHPPWYSTY AHYRE
Sbjct: 319 FNAGGIHFIMLGGYIAYNKSAHQYKWLKKDLAKVDRKVTPWLVATWHPPWYSTYKAHYRE 378
Query: 359 VECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDGGNVEGLDI 418
ECMR MEDLLY YGVDI+FNGH+HAYERSNRVYNY+LDPCGPV+I VGDGGN E + I
Sbjct: 379 AECMRTAMEDLLYQYGVDIIFNGHIHAYERSNRVYNYTLDPCGPVHITVGDGGNREKMAI 438
Query: 419 VHADEPGNCPEPSTTPD--MGGSCAFNFTSGPASGKFCWDRQPDYSAYRESSFGHGILEV 476
HADEP NCP+PSTTPD MGG CAFNFTSGPA+GKFCWDRQPDYSAYRESSFGHGI EV
Sbjct: 439 AHADEPRNCPDPSTTPDEYMGGFCAFNFTSGPAAGKFCWDRQPDYSAYRESSFGHGIFEV 498
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255554090|ref|XP_002518085.1| acid phosphatase, putative [Ricinus communis] gi|223542681|gb|EEF44218.1| acid phosphatase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 733 bits (1893), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/473 (72%), Positives = 398/473 (84%), Gaps = 7/473 (1%)
Query: 9 IPTTLEGPFKPVTAPLDKNLRLNVSDLPYV---LQNNAQGEGFQPEQIFVSLSARYDSVW 65
IPTTLEGPFKP T PLD++ R + DLP +Q + F+PEQI VSLS+ +DSVW
Sbjct: 50 IPTTLEGPFKPRTVPLDQSFRGHAIDLPDSDPRVQRTVRD--FEPEQISVSLSSTHDSVW 107
Query: 66 ISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTS 125
ISWITG++QIGDNI PL+P S+V + LT+QA GYSLVYNQLYP +GL+NYTS
Sbjct: 108 ISWITGDYQIGDNIKPLNPSATASVVLYGRSIFPLTHQATGYSLVYNQLYPFEGLKNYTS 167
Query: 126 GIIHHVLITGLQPNTLYEYECGDPSISAMSSSHYFRTMPVSGPSDYPNRIAVVGDLGLTY 185
G+IHHV +TGL+PNT Y Y+CGDPSI AMS ++FRTMP SGP +P +IA+VGDLGLTY
Sbjct: 168 GVIHHVRLTGLKPNTTYFYQCGDPSIPAMSDIYHFRTMPASGPKSFPGKIAIVGDLGLTY 227
Query: 186 NTTTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWG 245
NTT+TV HL+SN+PDL+LL+GD +YA+LYLTNGT + CY C ++PI ETYQPRWDYWG
Sbjct: 228 NTTSTVDHLISNNPDLILLVGDATYANLYLTNGTGADCYKCAFPQTPIHETYQPRWDYWG 287
Query: 246 RYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIH 305
RYMQPL+S +P MV+EG HEIE+QA+NQTFAAYSSRFAFPS+ESGS S+ YYSFNAGGIH
Sbjct: 288 RYMQPLISRIPIMVVEGNHEIEQQAQNQTFAAYSSRFAFPSKESGSPSTFYYSFNAGGIH 347
Query: 306 FVMLSAYIDYDKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVE 365
FVML AYI Y+KS DQYKWLE DL +VDREVTPWL+A WHPPWY+TY AHYRE ECMRV
Sbjct: 348 FVMLGAYISYNKSGDQYKWLERDLANVDREVTPWLVATWHPPWYNTYKAHYREAECMRVA 407
Query: 366 MEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDGGNVEGLDIVHADEPG 425
ME+LLY YGVD+VFNGHVHAYERSNRVYNY+LDPCGPV+I VGDGGN E + I HADEPG
Sbjct: 408 MEELLYKYGVDMVFNGHVHAYERSNRVYNYTLDPCGPVHITVGDGGNREKMAITHADEPG 467
Query: 426 NCPEPSTTPD--MGGSCAFNFTSGPASGKFCWDRQPDYSAYRESSFGHGILEV 476
NCP+PSTTPD MGG CAFNFTSGPA+GKFCWDRQPDYSAYRESSFGHGILEV
Sbjct: 468 NCPDPSTTPDEFMGGFCAFNFTSGPAAGKFCWDRQPDYSAYRESSFGHGILEV 520
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|145839433|gb|ABP96799.1| purple acid phosphatase [Nicotiana tabacum] | Back alignment and taxonomy information |
|---|
Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/473 (71%), Positives = 395/473 (83%), Gaps = 7/473 (1%)
Query: 9 IPTTLEGPFKPVTAPLDKNLRLNVSDLPYV---LQNNAQGEGFQPEQIFVSLSARYDSVW 65
IPTT++GPFKPVT PLD++ R + DLP +Q +G F+PEQI VSLS+ YDSVW
Sbjct: 28 IPTTVDGPFKPVTVPLDQSFRGHAVDLPDTDPRVQRTVKG--FEPEQISVSLSSTYDSVW 85
Query: 66 ISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTS 125
ISWITGE+QIGDNI PLDP V S+V + +SSL ++A G SL+YNQLYP +GLQNYTS
Sbjct: 86 ISWITGEYQIGDNIKPLDPSKVGSVVQYGKDKSSLRHKAIGESLIYNQLYPFEGLQNYTS 145
Query: 126 GIIHHVLITGLQPNTLYEYECGDPSISAMSSSHYFRTMPVSGPSDYPNRIAVVGDLGLTY 185
GIIHHV +TGL+PNTLY Y+CGDPSI AMS+ ++F+TMP+S P YP RIA+VGDLGLTY
Sbjct: 146 GIIHHVQLTGLKPNTLYYYQCGDPSIPAMSTIYHFKTMPISSPKSYPKRIAIVGDLGLTY 205
Query: 186 NTTTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWG 245
NTT+TV+HLM N P+L+LL+GD++YA+LYL+NGT S CY C ++PI ETYQPRWDYWG
Sbjct: 206 NTTSTVSHLMGNDPNLVLLVGDVTYANLYLSNGTGSDCYSCSFNDTPIHETYQPRWDYWG 265
Query: 246 RYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIH 305
RYMQPLVS +P MV+EG HEIE QAENQTFAAY SRFAFPS+ESGSSS YYSFNAGGIH
Sbjct: 266 RYMQPLVSKIPIMVVEGNHEIEEQAENQTFAAYRSRFAFPSKESGSSSPFYYSFNAGGIH 325
Query: 306 FVMLSAYIDYDKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVE 365
F+ML Y+ Y+KS DQYKWLE DL +VDR VTPWL+A WHPPWYSTY+AHYRE ECM+V
Sbjct: 326 FIMLGGYVAYNKSDDQYKWLERDLANVDRTVTPWLVATWHPPWYSTYTAHYREAECMKVA 385
Query: 366 MEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDGGNVEGLDIVHADEPG 425
ME+LLY GVD+VFNGHVHAYERSNRVYNY+LDPCGPVYI VGDGGN E + I HADEP
Sbjct: 386 MEELLYECGVDLVFNGHVHAYERSNRVYNYTLDPCGPVYITVGDGGNREKMAIEHADEPR 445
Query: 426 NCPEPSTTPD--MGGSCAFNFTSGPASGKFCWDRQPDYSAYRESSFGHGILEV 476
CP+P +TPD MGG CA+NF SGPA+G FCWD+QPDYSAYRESSFGHGILEV
Sbjct: 446 KCPKPDSTPDKFMGGFCAYNFISGPAAGNFCWDQQPDYSAYRESSFGHGILEV 498
|
Source: Nicotiana tabacum Species: Nicotiana tabacum Genus: Nicotiana Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225469592|ref|XP_002272478.1| PREDICTED: purple acid phosphatase 15 [Vitis vinifera] gi|296088799|emb|CBI38249.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/471 (70%), Positives = 386/471 (81%), Gaps = 3/471 (0%)
Query: 9 IPTTLEGPFKPVTAPLDKNLRLNVSDLPYV-LQNNAQGEGFQPEQIFVSLSARYDSVWIS 67
IPTTL+GPF PVT P D++LR DLP + + +GF+PEQI V+LSA +DSVWIS
Sbjct: 23 IPTTLDGPFTPVTVPFDQSLRGKAVDLPDTDPRVRRRVKGFEPEQISVALSASFDSVWIS 82
Query: 68 WITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127
WITGEFQIG NI PL+P+ V S+V + R L + GYSLVYNQLYP +GLQNYTSGI
Sbjct: 83 WITGEFQIGYNIKPLNPKTVSSVVRYGTLRYPLRRKVMGYSLVYNQLYPFEGLQNYTSGI 142
Query: 128 IHHVLITGLQPNTLYEYECGDPSISAMSSSHYFRTMPVSGPSDYPNRIAVVGDLGLTYNT 187
IHHV + GL+P+T Y Y CGDP+I AMS+ + FRTMPVSGP YP +I ++GDLGLTYN+
Sbjct: 143 IHHVRLAGLKPSTRYYYRCGDPTIGAMSNIYSFRTMPVSGPRSYPRKIGIIGDLGLTYNS 202
Query: 188 TTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRY 247
T T+ HL+SN PDL+LL+GD++YA+ YLTNGT S CY C ++PI ETYQPRWDYWGR+
Sbjct: 203 TATIDHLISNKPDLVLLVGDVTYANQYLTNGTGSDCYSCSFPQTPIHETYQPRWDYWGRF 262
Query: 248 MQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFV 307
MQ LVS VP MVIEG HEIE QAE + F AYSSRFAFPS+ESGS+S+ YYSFNAGGIHF+
Sbjct: 263 MQNLVSKVPMMVIEGNHEIEEQAEKKNFVAYSSRFAFPSKESGSASTFYYSFNAGGIHFI 322
Query: 308 MLSAYIDYDKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEME 367
ML AY Y+KS+DQYKWLE DL VDR +TPWLIAAWHPPWYS+Y AHYREVECMR EME
Sbjct: 323 MLGAYAAYNKSADQYKWLERDLAKVDRSITPWLIAAWHPPWYSSYKAHYREVECMRQEME 382
Query: 368 DLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDGGNVEGLDIVHADEPGNC 427
+LLY YGVDIVFNGHVHAYERSNRVYNY+LDPCGPV+I+VGDGGN E + I HAD PG C
Sbjct: 383 ELLYSYGVDIVFNGHVHAYERSNRVYNYTLDPCGPVHIMVGDGGNREKMAIEHADAPGKC 442
Query: 428 PEPSTTPD--MGGSCAFNFTSGPASGKFCWDRQPDYSAYRESSFGHGILEV 476
PEPSTTPD +GG CA NFT GPA+GKFCWDRQPD+SA+RESSFGHGILEV
Sbjct: 443 PEPSTTPDTFIGGFCATNFTFGPAAGKFCWDRQPDFSAFRESSFGHGILEV 493
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 487 | ||||||
| TAIR|locus:2098500 | 532 | PAP15 "purple acid phosphatase | 0.960 | 0.879 | 0.685 | 1.6e-182 | |
| TAIR|locus:2046407 | 545 | PAP13 "purple acid phosphatase | 0.870 | 0.777 | 0.598 | 9.2e-139 | |
| TAIR|locus:2083218 | 437 | PAP21 "purple acid phosphatase | 0.373 | 0.416 | 0.494 | 2.3e-70 | |
| TAIR|locus:2083288 | 427 | PAP20 [Arabidopsis thaliana (t | 0.381 | 0.435 | 0.468 | 9.3e-67 | |
| TAIR|locus:2085770 | 437 | PAP18 "purple acid phosphatase | 0.367 | 0.409 | 0.505 | 3.8e-64 | |
| TAIR|locus:2083238 | 434 | PAP22 "purple acid phosphatase | 0.478 | 0.536 | 0.431 | 1.3e-53 | |
| TAIR|locus:2010753 | 466 | PAP6 "purple acid phosphatase | 0.507 | 0.530 | 0.376 | 9.8e-50 | |
| TAIR|locus:2042689 | 468 | PAP10 "AT2G16430" [Arabidopsis | 0.486 | 0.506 | 0.363 | 2.9e-46 | |
| TAIR|locus:2184657 | 475 | PAP26 "AT5G34850" [Arabidopsis | 0.611 | 0.627 | 0.344 | 1.2e-45 | |
| TAIR|locus:2053149 | 441 | PAP11 "purple acid phosphatase | 0.478 | 0.528 | 0.349 | 2e-45 |
| TAIR|locus:2098500 PAP15 "purple acid phosphatase 15" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1771 (628.5 bits), Expect = 1.6e-182, P = 1.6e-182
Identities = 325/474 (68%), Positives = 374/474 (78%)
Query: 6 AIGIPTTLEGPFKPVTAPLDKNLRLNVSDLPYVLQN-NAQGEGFQPEQIFVSLSARYDSV 64
A IP+TL+GPF PVT PLD +LR DLP + GF+PEQI +SLS+ +DS+
Sbjct: 19 AHSIPSTLDGPFVPVTVPLDTSLRGQAIDLPDTDPRVRRRVIGFEPEQISLSLSSDHDSI 78
Query: 65 WISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYT 124
W+SWITGEFQIG + PLDP + S+V F R SL+++A+G+SLVY+QLYP DGL NYT
Sbjct: 79 WVSWITGEFQIGKKVKPLDPTSINSVVQFGTLRHSLSHEAKGHSLVYSQLYPFDGLLNYT 138
Query: 125 SGIIHHVLITGLQPNTLYEYECGDPSISAMSSSHYFRTMPVSGPSDYPNRIAVVGDLGLT 184
SGIIHHV ITGL+P+T+Y Y CGDPS AMS H+FRTMPVS PS YP RIAVVGDLGLT
Sbjct: 139 SGIIHHVRITGLKPSTIYYYRCGDPSRRAMSKIHHFRTMPVSSPSSYPGRIAVVGDLGLT 198
Query: 185 YNTTTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYW 244
YNTT T++HL+ N PDL+LLIGD+SYA+LYLTNGT S CY C E+PI ETYQPRWDYW
Sbjct: 199 YNTTDTISHLIHNSPDLILLIGDVSYANLYLTNGTSSDCYSCSFPETPIHETYQPRWDYW 258
Query: 245 GRYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPXXXXXXXXXXXXXFNAGGI 304
GR+M+ L S VP MVIEG HEIE QAEN+TF AYSSRFAFP FNAGGI
Sbjct: 259 GRFMENLTSKVPLMVIEGNHEIELQAENKTFEAYSSRFAFPFNESGSSSTLYYSFNAGGI 318
Query: 305 HFVMLSAYIDYDKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRV 364
HFVML AYI YDKS++QY+WL+ DL VDR VTPWL+A+WHPPWYS+Y+AHYRE ECM+
Sbjct: 319 HFVMLGAYIAYDKSAEQYEWLKKDLAKVDRSVTPWLVASWHPPWYSSYTAHYREAECMKE 378
Query: 365 EMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDGGNVEGLDIVHADEP 424
ME+LLY YG DIVFNGHVHAYERSNRVYNY LDPCGPVYI++GDGGN E + I HAD+P
Sbjct: 379 AMEELLYSYGTDIVFNGHVHAYERSNRVYNYELDPCGPVYIVIGDGGNREKMAIEHADDP 438
Query: 425 GNCPEPSTTPD--MGGSCAFNFTSGPASGKFCWDRQPDYSAYRESSFGHGILEV 476
G CPEP TTPD MGG CA+NFT P S KFCWDRQPDYSA RESSFGHGILE+
Sbjct: 439 GKCPEPLTTPDPVMGGFCAWNFT--P-SDKFCWDRQPDYSALRESSFGHGILEM 489
|
|
| TAIR|locus:2046407 PAP13 "purple acid phosphatase 13" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1358 (483.1 bits), Expect = 9.2e-139, P = 9.2e-139
Identities = 265/443 (59%), Positives = 313/443 (70%)
Query: 50 PEQIFVSLSARYDSVWISWITGEFQIGDNIS-PLDPELVQSIVYFRVF--RSSLTYQAEG 106
PEQI VSLS +DSVWISW+TGE+QIG+ S PLDP VQSIV +R F R + A G
Sbjct: 69 PEQISVSLSYSFDSVWISWVTGEYQIGEKDSAPLDPNCVQSIVQYREFDVRRTRKQNATG 128
Query: 107 YSLVYNQLYPPD-GLQNYTSGIIHHVLITGLQPNTLYEYECGDPSISAMSSSHYFRTMPV 165
+S+VYNQ Y + G NYTSGIIHHV +TGL+PNTLY Y+CGDPS+SAMS +YFRTMP
Sbjct: 129 HSIVYNQQYSSENGFMNYTSGIIHHVQLTGLKPNTLYRYQCGDPSLSAMSKEYYFRTMPK 188
Query: 166 SGPSDYPNRIAVVGDLGLTYNTTTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTK---SS 222
S +YP+RI V GDLGLTYNT+T + H++SNHPDL++L+G SYAD YL N TK SS
Sbjct: 189 STSENYPHRIVVAGDLGLTYNTSTVLGHILSNHPDLVVLLGGFSYADTYLANKTKLDCSS 248
Query: 223 CYL--------CQSIESPIQETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIERQAENQ- 273
C+ C S S ETYQPRWDYWGR+M+PL +NVPTM++ GEHEIE Q EN
Sbjct: 249 CHCDQNGTSSDCGSCYSS-GETYQPRWDYWGRFMEPLTANVPTMMVAGEHEIEPQTENNL 307
Query: 274 TFAAYSSRFAFPXXXXXXXXXXXXXFNAGGIHFVMLSAYIDYDKSSDQYKWLESDLGDVD 333
TFAAYSSRFAFP FNAGG HF++L++Y YD SSDQY WLESDL ++
Sbjct: 308 TFAAYSSRFAFPSNESGSFSPLYYSFNAGGAHFIVLNSYTLYDNSSDQYIWLESDLIKIN 367
Query: 334 REVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVY 393
R TPW++A W PWYST+ HYRE E MR+ +EDLLY Y VDIVFN HV AYERSNRVY
Sbjct: 368 RSETPWVVATWSLPWYSTFKGHYREAESMRIHLEDLLYNYRVDIVFNSHVDAYERSNRVY 427
Query: 394 NYSLDPCGPVYILVGDGGNVEGLDIVHADEPGNCPEPSTTPDMGGSCAFNFTSGPASGKF 453
NY+LD CGPVYI G GG + L+ H D+PGN P+PS S N T P +
Sbjct: 428 NYTLDQCGPVYITTGAGGAGK-LETQHVDDPGNIPDPSQNYSCRSS-GLNSTLEPVKDET 485
Query: 454 CWDRQPDYSAYRESSFGHGILEV 476
C +QP+YSAYRESSFG GILEV
Sbjct: 486 CPVKQPEYSAYRESSFGFGILEV 508
|
|
| TAIR|locus:2083218 PAP21 "purple acid phosphatase 21" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 493 (178.6 bits), Expect = 2.3e-70, Sum P(4) = 2.3e-70
Identities = 91/184 (49%), Positives = 114/184 (61%)
Query: 235 ETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIERQAENQ--TFAAYSSRFAFPXXXXXXX 292
+T+QP WD +GR ++ L S P MV EG HEIE N +F +Y++R+ P
Sbjct: 184 DTHQPLWDSFGRLLETLASTRPWMVTEGNHEIESFPTNDHISFKSYNARWLMPHAESLSH 243
Query: 293 XXXXXXFNAGGIHFVMLSAYIDYDKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTY 352
F+ G+H VML +Y Y+ SDQY WL++DL VDR+ TPWL+ H PWYST
Sbjct: 244 SNLYYSFDVAGVHTVMLGSYTPYESHSDQYHWLQADLRKVDRKKTPWLVVVMHTPWYSTN 303
Query: 353 SAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDGGN 412
AHY E E MR +E LLY VD+VF GHVH YER +YN DPCGP+YI +GDGGN
Sbjct: 304 KAHYGEGEKMRSALESLLYRAQVDVVFAGHVHTYERFKPIYNKKADPCGPMYITIGDGGN 363
Query: 413 VEGL 416
EGL
Sbjct: 364 REGL 367
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| TAIR|locus:2083288 PAP20 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 478 (173.3 bits), Expect = 9.3e-67, Sum P(3) = 9.3e-67
Identities = 89/190 (46%), Positives = 117/190 (61%)
Query: 237 YQPRWDYWGRYMQPLVSNVPTMVIEGEHEIERQA--ENQTFAAYSSRFAFPXXXXXXXXX 294
YQP WD +GR +QPL S P MV G HE+E+ + F AY+ R+ P
Sbjct: 181 YQPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPILHSNPFTAYNKRWRMPFEESGSSSN 240
Query: 295 XXXXFNAGGIHFVMLSAYIDYDKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSA 354
FN G+H +ML +Y D++ S+QY+WLE++L +DR+ TPW++A H PWY++ A
Sbjct: 241 LYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEA 300
Query: 355 HYREVEC--MRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDGGN 412
H E E M+ ME LLY VD+VF GHVHAYER +RVY D CGPVYI +GDGGN
Sbjct: 301 HQGEKESVEMKESMETLLYKARVDLVFAGHVHAYERFSRVYQDKFDKCGPVYINIGDGGN 360
Query: 413 VEGLDIVHAD 422
+EGL + D
Sbjct: 361 LEGLATKYRD 370
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| TAIR|locus:2085770 PAP18 "purple acid phosphatase 18" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 477 (173.0 bits), Expect = 3.8e-64, Sum P(3) = 3.8e-64
Identities = 91/180 (50%), Positives = 113/180 (62%)
Query: 238 QPRWDYWGRYMQPLVSNVPTMVIEGEHEIER-QAENQTFAAYSSRFAFPXXXXXXXXXXX 296
Q +WD +G +QPL S P MV +G HE E F +++SR+ P
Sbjct: 183 QHKWDTFGELVQPLASVRPWMVTQGNHEKESIPFIVDEFVSFNSRWKMPYEESGSNSNLY 242
Query: 297 XXFNAGGIHFVMLSAYIDYDKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHY 356
F G+H +ML +Y DYD+ SDQY WL++DL VDRE TPWLI +H PWY++ +AH
Sbjct: 243 YSFEVAGVHAIMLGSYTDYDRYSDQYSWLKADLSKVDRERTPWLIVLFHVPWYNSNNAHQ 302
Query: 357 REVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDGGNVEGL 416
E + M EME LLY GVDIVF GHVHAYER+ RV N DPCGPV+I +GDGGN EGL
Sbjct: 303 HEGDEMMAEMEPLLYASGVDIVFTGHVHAYERTKRVNNGKSDPCGPVHITIGDGGNREGL 362
|
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| TAIR|locus:2083238 PAP22 "purple acid phosphatase 22" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 514 (186.0 bits), Expect = 1.3e-53, Sum P(2) = 1.3e-53
Identities = 104/241 (43%), Positives = 136/241 (56%)
Query: 196 SNHPDLLLLIGDLSY-----ADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYMQP 250
S P ++GDL A L N +L + +T+QP WD +GR ++P
Sbjct: 137 STFPVEFAIVGDLGQTEWTAATLSHINSQDYDVFLLPG-DLSYADTHQPLWDSFGRLVEP 195
Query: 251 LVSNVPTMVIEGEHEIE--RQAENQTFAAYSSRFAFPXXXXXXXXXXXXXFNAGGIHFVM 308
L S P MV EG HEIE E+ TF +Y++R+ P F+ G+H VM
Sbjct: 196 LASKRPWMVTEGNHEIEFFPIIEHTTFKSYNARWLMPHTESFSTSNLYYSFDVAGVHTVM 255
Query: 309 LSAYIDYDKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMED 368
L +Y D+D SDQY+WL++DL VDR+ TPW++ H PWY+T AH E E MR ME
Sbjct: 256 LGSYTDFDCESDQYQWLQADLAKVDRKTTPWVVVLLHAPWYNTNEAHEGEGESMREAMES 315
Query: 369 LLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDGGNVEGLDIVHADEPGNCP 428
LL+ VD+VF+GHVHAYER RVYN DPCGP++I +GDGGN EGL + P
Sbjct: 316 LLFNARVDVVFSGHVHAYERFKRVYNNKADPCGPIHITIGDGGNREGLALSFKKPPSPLS 375
Query: 429 E 429
E
Sbjct: 376 E 376
|
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| TAIR|locus:2010753 PAP6 "purple acid phosphatase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 445 (161.7 bits), Expect = 9.8e-50, Sum P(2) = 9.8e-50
Identities = 108/287 (37%), Positives = 143/287 (49%)
Query: 160 FRTMPVSGPSDYPNRIAVVGDLGLTYNTTTTVAHLMSNHP-DLLLLIGDLSYADLYLTNG 218
F T P GP D P ++GDLG TY + T+ H MSN +L GDLSYAD
Sbjct: 145 FTTPPKIGP-DVPYTFGIIGDLGQTYASNETLYHYMSNPKGQAVLFAGDLSYAD------ 197
Query: 219 TKSSCYLCQSIESPIQETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIE---RQAENQTF 275
+ P + Q +WD WGR+M+P + P + G HEI+ E F
Sbjct: 198 -----------DHPNHD--QRKWDTWGRFMEPCAAYQPFIFAAGNHEIDFVPNIGEPHAF 244
Query: 276 AAYSSRFAFPXXXXXXXXXXXXXFNAGGIHFVMLSAYIDYDKSSDQYKWLESDLGDVDRE 335
Y+ R+ H ++LS+Y Y K + QY WLE +L +V+RE
Sbjct: 245 KPYTHRYPNAYKASQSTSPLWYSVRRASAHIIVLSSYSAYGKYTPQYIWLEQELKNVNRE 304
Query: 336 VTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYN- 394
TPWLI H PWY++ + HY E E MRV E L VD+V +GHVHAYERS R+ N
Sbjct: 305 ETPWLIVIVHSPWYNSNNYHYMEGESMRVMFESWLVNSKVDLVLSGHVHAYERSERISNI 364
Query: 395 -YSL---------DPCGPVYILVGDGGNVEGLDIVHADEPGNCPEPS 431
Y++ DP P+YI +GDGGN+EG+ D P+PS
Sbjct: 365 KYNITNGLSSPVKDPNAPIYITIGDGGNIEGIANSFVD-----PQPS 406
|
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| TAIR|locus:2042689 PAP10 "AT2G16430" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 431 (156.8 bits), Expect = 2.9e-46, Sum P(2) = 2.9e-46
Identities = 100/275 (36%), Positives = 139/275 (50%)
Query: 159 YFRTMPVSGPSDYPNRIAVVGDLGLTYNTTTTVAHLMSNHP---DLLLLIGDLSYADLYL 215
+F T P GP D P ++GDLG +Y++ T+ H N+P +L +GD+SYAD Y
Sbjct: 147 WFFTPPEIGP-DVPYTFGLIGDLGQSYDSNITLTHY-ENNPTKGQAVLFVGDISYADTYP 204
Query: 216 TNGTKSSCYLCQSIESPIQETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIE---RQAEN 272
+ + RWD WGR+ + + P + G HE++ EN
Sbjct: 205 DHDNR-------------------RWDSWGRFAERSTAYQPWIWTTGNHELDFAPEIGEN 245
Query: 273 QTFAAYSSRFAFPXXXXXXXXXXXXXFNAGGIHFVMLSAYIDYDKSSDQYKWLESDLGDV 332
+ F ++ R+ P G + ++L++Y Y K + QY+WLE + V
Sbjct: 246 RPFKPFTHRYRTPYRSSGSTEPFWYSIKRGPAYIIVLASYSAYGKYTPQYQWLEEEFPKV 305
Query: 333 DREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRV 392
+R TPWLI H PWY++Y HY E E MRV E Y VD+VF GHVHAYERS RV
Sbjct: 306 NRTETPWLIVLMHSPWYNSYDYHYMEGETMRVMYEAWFVKYKVDVVFAGHVHAYERSERV 365
Query: 393 YN--YSL---------DPCGPVYILVGDGGNVEGL 416
N Y++ D PVYI +GDGGN+EGL
Sbjct: 366 SNIAYNVVNGICTPVKDQSAPVYITIGDGGNIEGL 400
|
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| TAIR|locus:2184657 PAP26 "AT5G34850" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 415 (151.1 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 115/334 (34%), Positives = 155/334 (46%)
Query: 98 SSLTYQA-EG-YSLVYNQLYPPDGLQNYTSGIIHHVLITGLQPNTLYEYECGDPSISAMS 155
S + Y A +G Y V Y Y SG IHH L++ L+ +T Y Y+ S
Sbjct: 82 SQVHYGAVQGKYEFVAQGTYHNYTFYKYKSGFIHHCLVSDLEHDTKYYYKIES---GESS 138
Query: 156 SSHYFRTMPVSGPSDYPNRIAVVGDLGLTYNTTTTVAHLMSNHPDLLLLIGDLSYADLYL 215
+F T P P D + ++GD+G T+N+ +T+ H M + +L +GDLSYAD Y
Sbjct: 139 REFWFVTPPHVHP-DASYKFGIIGDMGQTFNSLSTLEHYMESGAQAVLFLGDLSYADRYQ 197
Query: 216 TN--GTKSSCYLCQSIESPIQETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIERQAENQ 273
N G + + + +E YQP W W V +P M E
Sbjct: 198 YNDVGVRWDSW-GRFVER--STAYQP-W-LWSAGNHE-VDYMPYM-----------GEVT 240
Query: 274 TFAAYSSRFAFPXXXXXXXXXXXXXFNAGGIHFVMLSAYIDYDKSSDQYKWLESDLGDVD 333
F Y R+ P H ++LS+Y + K + Q+ WL +L VD
Sbjct: 241 PFRNYLQRYTTPYLASKSSSPLWYAVRRASAHIIVLSSYSPFVKYTPQWHWLSEELTRVD 300
Query: 334 REVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRV- 392
RE TPWLI H P Y++ AH+ E E MR E+ + VD++F GHVHAYERS R+
Sbjct: 301 REKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFEEWFVQHKVDVIFAGHVHAYERSYRIS 360
Query: 393 ---YNYSL-------DPCGPVYILVGDGGNVEGL 416
YN S D PVYI VGDGGN EGL
Sbjct: 361 NVRYNVSSGDRYPVPDKSAPVYITVGDGGNQEGL 394
|
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| TAIR|locus:2053149 PAP11 "purple acid phosphatase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 371 (135.7 bits), Expect = 2.0e-45, Sum P(3) = 2.0e-45
Identities = 95/272 (34%), Positives = 132/272 (48%)
Query: 175 IAVVGDLGLTYNTTTTVAHLMSNHP-DLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPI 233
I DLG TY + T+ + MSN +L +GDLSYAD + P
Sbjct: 140 IRYYSDLGQTYASNQTLYNYMSNPKGQAVLFVGDLSYAD-----------------DHPN 182
Query: 234 QETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIERQ---AENQTFAAYSSRFAFPXXXXX 290
+ Q +WD +GR+++P + P G +EI+ +E Q F Y +R+ P
Sbjct: 183 HD--QRKWDSYGRFVEPSAAYQPWSWAAGNYEIDYAQSISETQPFKPYKNRYHVPYKASQ 240
Query: 291 XXXXXXXXFNAGGIHFVMLSAYIDYDKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYS 350
+ ++LS+Y YDK + Q WL+ +L V+R T WLI H PWY+
Sbjct: 241 STSPLWYSIKRASTYIIVLSSYSAYDKYTPQNSWLQDELKKVNRSETSWLIVLVHAPWYN 300
Query: 351 TYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYN--YSL---------DP 399
+ + HY E E MRV E VDIVF GHVHAYERS R+ N Y++ D
Sbjct: 301 SNNYHYMEGESMRVTFEPWFVENKVDIVFAGHVHAYERSKRISNIHYNITDGMSTPVKDQ 360
Query: 400 CGPVYILVGDGGNVEGLDIVHADEPGNCPEPS 431
P+YI +GDGGN+EG+ D P+PS
Sbjct: 361 NAPIYITIGDGGNIEGIANSFTD-----PQPS 387
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9SFU3 | PPA15_ARATH | 3, ., 1, ., 3, ., 2 | 0.7046 | 0.9609 | 0.8796 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| GSVIVG00031672001 | SubName- Full=Chromosome chr5 scaffold_58, whole genome shotgun sequence; (537 aa) | ||||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 487 | |||
| PLN02533 | 427 | PLN02533, PLN02533, probable purple acid phosphata | 2e-93 | |
| cd00839 | 294 | cd00839, MPP_PAPs, purple acid phosphatases of the | 6e-91 | |
| pfam00149 | 185 | pfam00149, Metallophos, Calcineurin-like phosphoes | 6e-17 | |
| cd00838 | 131 | cd00838, MPP_superfamily, metallophosphatase super | 2e-07 | |
| cd07378 | 277 | cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 | 4e-07 | |
| pfam14008 | 62 | pfam14008, Metallophos_C, Iron/zinc purple acid ph | 1e-04 | |
| cd07395 | 262 | cd07395, MPP_CSTP1, Homo sapiens CSTP1 and related | 2e-04 |
| >gnl|CDD|215292 PLN02533, PLN02533, probable purple acid phosphatase | Back alignment and domain information |
|---|
Score = 289 bits (741), Expect = 2e-93
Identities = 174/444 (39%), Positives = 233/444 (52%), Gaps = 88/444 (19%)
Query: 37 YVLQNNAQGEGFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVF 96
V+ + + + P+Q+ +SL D + ISWIT D+I P S+VY V
Sbjct: 31 LVIHPDNEDDPTHPDQVHISLVGP-DKMRISWITQ-----DSIPP-------SVVYGTV- 76
Query: 97 RSSLTYQAEGYSLVYNQLYPPDGLQNYTSGIIHHVLITGLQPNTLYEYECGDPSISAMSS 156
A G S Y+ L Y SG I+ V+I L+PNT+Y Y+CG PS + S
Sbjct: 77 SGKYEGSANGTSSSYHYLLI------YRSGQINDVVIGPLKPNTVYYYKCGGPSSTQEFS 130
Query: 157 SHYFRTMPVSGPSDYPNRIAVVGDLGLTYNTTTTVAHLMSNHPDLLLLIGDLSYADLYLT 216
FRT PS +P + AV GDLG + T +T+ H+ D+ +L GDLSYA+ Y
Sbjct: 131 ---FRT----PPSKFPIKFAVSGDLGTSEWTKSTLEHVSKWDYDVFILPGDLSYANFY-- 181
Query: 217 NGTKSSCYLCQSIESPIQETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIER--QAENQT 274
QP WD +GR +QPL S P MV G HE+E+ +
Sbjct: 182 ---------------------QPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPILHPEK 220
Query: 275 FAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYIDYDKSSDQYKWLESDLGDVDR 334
F AY++R+ P EESGS+S+LYYSFN G+H +ML +Y D++ S+QY+WLE++L +DR
Sbjct: 221 FTAYNARWRMPFEESGSTSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDR 280
Query: 335 EVTPWLIAAWHPPWYSTYSAHYREVEC--MRVEMEDLLYYYGVDIVFNGHVHAYERSNRV 392
+ TPW++A H PWY++ AH E E M+ ME LLY VD+VF GHVHAYER +RV
Sbjct: 281 KTTPWVVAVVHAPWYNSNEAHQGEKESVGMKESMETLLYKARVDLVFAGHVHAYERFDRV 340
Query: 393 YNYSLDPCGPVYILVGDGGNVEGLDIVHADEPGNCPEPSTTPDMGGSCAFNFTSGPASGK 452
Y D CGPVYI +GDGGN EGL + D
Sbjct: 341 YQGKTDKCGPVYITIGDGGNREGLATKYIDP----------------------------- 371
Query: 453 FCWDRQPDYSAYRESSFGHGILEV 476
+PD S +RE+SFGHG L V
Sbjct: 372 -----KPDISLFREASFGHGQLNV 390
|
Length = 427 |
| >gnl|CDD|163615 cd00839, MPP_PAPs, purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 278 bits (713), Expect = 6e-91
Identities = 123/324 (37%), Positives = 158/324 (48%), Gaps = 72/324 (22%)
Query: 169 SDYPNRIAVVGDLGL-TYNTTTTVAHLMS--NHPDLLLLIGDLSYADLYLTNGTKSSCYL 225
D P + AV GD+G T N+T T+ HL + D +L +GDL+YAD Y
Sbjct: 1 DDTPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADGYNN--------- 51
Query: 226 CQSIESPIQETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFP 285
RWD + R ++PL S VP MV G HE + A+ RF FP
Sbjct: 52 ------------GSRWDTFMRQIEPLASYVPYMVTPGNHEADYNFSFYKIKAFFPRFRFP 99
Query: 286 SEESGSSSSLYYSFNAGGIHFVMLSAYIDY---DKSSDQYKWLESDLGDVDREVTPWLIA 342
SGS+S+L+YSF+ G +HFV LS +D+ S QY WLE+DL VDR TPW+I
Sbjct: 100 HSPSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDWLEADLAKVDRSKTPWIIV 159
Query: 343 AWHPPWYSTYSAHY--REVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYN------ 394
H P Y + + H E E MR +EDL Y YGVD+V +GHVHAYER+ VYN
Sbjct: 160 MGHRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVVGD 219
Query: 395 --YSLDPCGPVYILVGDGGNVEGLDIVHADEPGNCPEPSTTPDMGGSCAFNFTSGPASGK 452
+P GPV+I++G GGN EGLD A
Sbjct: 220 CNPYSNPKGPVHIVIGAGGNDEGLDPFSAPP----------------------------- 250
Query: 453 FCWDRQPDYSAYRESSFGHGILEV 476
P +SA+RES +G G L V
Sbjct: 251 ------PAWSAFRESDYGFGRLTV 268
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 294 |
| >gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase | Back alignment and domain information |
|---|
Score = 78.6 bits (193), Expect = 6e-17
Identities = 38/217 (17%), Positives = 64/217 (29%), Gaps = 36/217 (16%)
Query: 174 RIAVVGDLGLTYNTTTTVAHLM----SNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSI 229
RI V+GDL + + L+ PDL+L +GDL
Sbjct: 1 RILVIGDLHGGLDDLDLLLLLLELLGEPKPDLVLFLGDLVDRGPP--------------- 45
Query: 230 ESPIQETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEES 289
+ L + P ++ G H+ + F + +
Sbjct: 46 ---------SLEVLALLFALKLKAPGPVYLVRGNHDFDSGNSELGFYLECAGLPYVLG-- 94
Query: 290 GSSSSLYYSFNAGGIHFVMLSAYIDYDKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWY 349
+ G + + LS+ ++LE + + I H P
Sbjct: 95 ------NGDVSNGTVEIIGLSSLYGKGGGLVWEEFLELLDLLLLAALVDGKILLVHGPLS 148
Query: 350 STYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAY 386
+ + +EDLL GVD+V GH H
Sbjct: 149 PSLDSGDDIYLFGEEALEDLLKDNGVDLVLRGHTHVP 185
|
This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues. Length = 185 |
| >gnl|CDD|163614 cd00838, MPP_superfamily, metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 2e-07
Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Query: 341 IAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPC 400
I H P Y + + + +LL YGVD+V +GH H YER D
Sbjct: 70 ILLTHGPPYDPLDELSPDEDPGSEALLELLEKYGVDLVLSGHTHVYER------REPDGG 123
Query: 401 GPVYILVG 408
G +YI G
Sbjct: 124 GTLYINPG 131
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 131 |
| >gnl|CDD|163621 cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 51.1 bits (123), Expect = 4e-07
Identities = 59/283 (20%), Positives = 84/283 (29%), Gaps = 83/283 (29%)
Query: 174 RIAVVGDLGLTYNTT---TTVAHLMSN-----HPDLLLLIGDLSYADLYLTNGTKSSCYL 225
R +GD G T VA M+ PD +L +GD Y
Sbjct: 2 RFLALGDWG--GGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFY--------------- 44
Query: 226 CQSIESPIQETYQPRWD------YWGRYMQPLVSNVPTMVIEGEHEIERQAENQ---TFA 276
+ + PR++ Y +Q VP ++ G H+ Q T
Sbjct: 45 ----DDGVGSVDDPRFETTFEDVYSAPSLQ-----VPWYLVLGNHDYSGNVSAQIDYTKR 95
Query: 277 AYSSRFAFPSEESGSSSSLYYSFNAGG-----------IHFVMLSAYIDYDKS------- 318
S R+ P+ YY + I V L D S
Sbjct: 96 PNSPRWTMPAY--------YYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIASPYGPPNG 147
Query: 319 ---SDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGV 375
+Q WLE L W I H P YS S + C+ + LL Y V
Sbjct: 148 KLAEEQLAWLEKTL---AASTADWKIVVGHHPIYS--SGEHGPTSCLVDRLLPLLKKYKV 202
Query: 376 DIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDGGNVEGLDI 418
D +GH H + + D G +++ G G
Sbjct: 203 DAYLSGHDHNLQ------HIKDDGSGTSFVVSGAGSKARPSVK 239
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 277 |
| >gnl|CDD|206178 pfam14008, Metallophos_C, Iron/zinc purple acid phosphatase-like protein C | Back alignment and domain information |
|---|
Score = 39.8 bits (94), Expect = 1e-04
Identities = 19/77 (24%), Positives = 26/77 (33%), Gaps = 37/77 (48%)
Query: 401 GPVYILVGDGGNVEGLDIVHADEPGNCPEPSTTPDMGGSCAFNFTSGPASGKFCWDRQPD 460
PV+I+VG GN F D QP
Sbjct: 2 APVHIVVGAAGNGLD------------------------------------PF-PDPQPP 24
Query: 461 YSAYRESSFGHGILEVL 477
+SA+R+S +G+G L V
Sbjct: 25 WSAFRDSDYGYGRLTVH 41
|
This domain is found at the C-terminus of Purple acid phosphatase proteins. Length = 62 |
| >gnl|CDD|163638 cd07395, MPP_CSTP1, Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 2e-04
Identities = 33/152 (21%), Positives = 58/152 (38%), Gaps = 26/152 (17%)
Query: 246 RYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIH 305
+ L ++P + + G H++ ++ Y F G Y+SF GG+
Sbjct: 78 DVLSLLDPDIPLVCVCGNHDVGNTPTEESIKDYRDVF-------GDD---YFSFWVGGVF 127
Query: 306 FVMLSAYIDYDKS------SDQYKWLESDLGD-VDREVTPWLIAAWHPPWYST------Y 352
F++L++ + +D S Q WLE L + + ++ P + Y
Sbjct: 128 FIVLNSQLFFDPSEVPELAQAQDVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSY 187
Query: 353 SAHYREVECMRVEMEDLLYYYGVDIVFNGHVH 384
+ V R + D GV VF+GH H
Sbjct: 188 FNIPKSV---RKPLLDKFKKAGVKAVFSGHYH 216
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 262 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 487 | |||
| KOG1378 | 452 | consensus Purple acid phosphatase [Carbohydrate tr | 100.0 | |
| PLN02533 | 427 | probable purple acid phosphatase | 100.0 | |
| cd00839 | 294 | MPP_PAPs purple acid phosphatases of the metalloph | 100.0 | |
| cd07378 | 277 | MPP_ACP5 Homo sapiens acid phosphatase 5 and relat | 100.0 | |
| PTZ00422 | 394 | glideosome-associated protein 50; Provisional | 99.97 | |
| cd07395 | 262 | MPP_CSTP1 Homo sapiens CSTP1 and related proteins, | 99.95 | |
| PF09423 | 453 | PhoD: PhoD-like phosphatase; InterPro: IPR018946 T | 99.92 | |
| cd07402 | 240 | MPP_GpdQ Enterobacter aerogenes GpdQ and related p | 99.92 | |
| cd07396 | 267 | MPP_Nbla03831 Homo sapiens Nbla03831 and related p | 99.91 | |
| COG3540 | 522 | PhoD Phosphodiesterase/alkaline phosphatase D [Ino | 99.89 | |
| KOG2679 | 336 | consensus Purple (tartrate-resistant) acid phospha | 99.89 | |
| cd07401 | 256 | MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal | 99.87 | |
| PRK11148 | 275 | cyclic 3',5'-adenosine monophosphate phosphodieste | 99.86 | |
| cd07399 | 214 | MPP_YvnB Bacillus subtilis YvnB and related protei | 99.82 | |
| cd00842 | 296 | MPP_ASMase acid sphingomyelinase and related prote | 99.79 | |
| PF00149 | 200 | Metallophos: Calcineurin-like phosphoesterase; Int | 99.72 | |
| cd08163 | 257 | MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related | 99.72 | |
| cd07393 | 232 | MPP_DR1119 Deinococcus radiodurans DR1119 and rela | 99.68 | |
| cd07383 | 199 | MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase | 99.64 | |
| cd07392 | 188 | MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel | 99.64 | |
| TIGR03729 | 239 | acc_ester putative phosphoesterase. Members of thi | 99.63 | |
| TIGR03767 | 496 | P_acnes_RR metallophosphoesterase, PPA1498 family. | 99.63 | |
| COG1409 | 301 | Icc Predicted phosphohydrolases [General function | 99.55 | |
| cd07385 | 223 | MPP_YkuE_C Bacillus subtilis YkuE and related prot | 99.55 | |
| cd07400 | 144 | MPP_YydB Bacillus subtilis YydB and related protei | 99.54 | |
| cd07404 | 166 | MPP_MS158 Microscilla MS158 and related proteins, | 99.5 | |
| cd07388 | 224 | MPP_Tt1561 Thermus thermophilus Tt1561 and related | 99.48 | |
| PRK11340 | 271 | phosphodiesterase YaeI; Provisional | 99.45 | |
| cd00840 | 223 | MPP_Mre11_N Mre11 nuclease, N-terminal metallophos | 99.43 | |
| TIGR03768 | 492 | RPA4764 metallophosphoesterase, RPA4764 family. Th | 99.4 | |
| PF14008 | 62 | Metallophos_C: Iron/zinc purple acid phosphatase-l | 99.39 | |
| cd00838 | 131 | MPP_superfamily metallophosphatase superfamily, me | 99.31 | |
| KOG1432 | 379 | consensus Predicted DNA repair exonuclease SIA1 [G | 99.26 | |
| cd07389 | 228 | MPP_PhoD Bacillus subtilis PhoD and related protei | 99.22 | |
| cd07397 | 238 | MPP_DevT Myxococcus xanthus DevT and related prote | 99.22 | |
| cd07379 | 135 | MPP_239FB Homo sapiens 239FB and related proteins, | 99.18 | |
| PF12850 | 156 | Metallophos_2: Calcineurin-like phosphoesterase su | 99.17 | |
| COG1408 | 284 | Predicted phosphohydrolases [General function pred | 99.14 | |
| PRK05340 | 241 | UDP-2,3-diacylglucosamine hydrolase; Provisional | 99.1 | |
| TIGR00040 | 158 | yfcE phosphoesterase, MJ0936 family. Members of th | 99.0 | |
| cd00841 | 155 | MPP_YfcE Escherichia coli YfcE and related protein | 98.96 | |
| cd08166 | 195 | MPP_Cdc1_like_1 uncharacterized subgroup related t | 98.95 | |
| KOG3770 | 577 | consensus Acid sphingomyelinase and PHM5 phosphate | 98.92 | |
| cd07403 | 129 | MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel | 98.88 | |
| COG2129 | 226 | Predicted phosphoesterases, related to the Icc pro | 98.87 | |
| PF14582 | 255 | Metallophos_3: Metallophosphoesterase, calcineurin | 98.85 | |
| COG1768 | 230 | Predicted phosphohydrolase [General function predi | 98.85 | |
| cd08165 | 156 | MPP_MPPE1 human MPPE1 and related proteins, metall | 98.84 | |
| TIGR01854 | 231 | lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. | 98.84 | |
| cd07384 | 171 | MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re | 98.82 | |
| cd07394 | 178 | MPP_Vps29 Homo sapiens Vps29 and related proteins, | 98.75 | |
| cd07398 | 217 | MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat | 98.69 | |
| cd00845 | 252 | MPP_UshA_N_like Escherichia coli UshA-like family, | 98.69 | |
| PRK09453 | 182 | phosphodiesterase; Provisional | 98.66 | |
| cd07410 | 277 | MPP_CpdB_N Escherichia coli CpdB and related prote | 98.64 | |
| cd08164 | 193 | MPP_Ted1 Saccharomyces cerevisiae Ted1 and related | 98.63 | |
| cd07406 | 257 | MPP_CG11883_N Drosophila melanogaster CG11883 and | 98.58 | |
| TIGR00583 | 405 | mre11 DNA repair protein (mre11). All proteins in | 98.47 | |
| cd00844 | 262 | MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t | 98.46 | |
| COG0420 | 390 | SbcD DNA repair exonuclease [DNA replication, reco | 98.42 | |
| cd07411 | 264 | MPP_SoxB_N Thermus thermophilus SoxB and related p | 98.41 | |
| COG2908 | 237 | Uncharacterized protein conserved in bacteria [Fun | 98.35 | |
| cd07408 | 257 | MPP_SA0022_N Staphylococcus aureus SA0022 and rela | 98.35 | |
| cd07412 | 288 | MPP_YhcR_N Bacillus subtilis YhcR endonuclease and | 98.33 | |
| COG0622 | 172 | Predicted phosphoesterase [General function predic | 98.23 | |
| cd07382 | 255 | MPP_DR1281 Deinococcus radiodurans DR1281 and rela | 98.22 | |
| PRK04036 | 504 | DNA polymerase II small subunit; Validated | 98.21 | |
| cd07409 | 281 | MPP_CD73_N CD73 ecto-5'-nucleotidase and related p | 98.19 | |
| cd07407 | 282 | MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and | 98.17 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.11 | |
| cd07424 | 207 | MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do | 98.08 | |
| TIGR00282 | 266 | metallophosphoesterase, MG_246/BB_0505 family. A m | 98.07 | |
| cd07386 | 243 | MPP_DNA_pol_II_small_archeal_C archeal DNA polymer | 98.05 | |
| KOG3662 | 410 | consensus Cell division control protein/predicted | 98.04 | |
| cd07425 | 208 | MPP_Shelphs Shewanella-like phosphatases, metallop | 97.98 | |
| TIGR00619 | 253 | sbcd exonuclease SbcD. This family is based on the | 97.98 | |
| cd07405 | 285 | MPP_UshA_N Escherichia coli UshA and related prote | 97.92 | |
| PRK11439 | 218 | pphA serine/threonine protein phosphatase 1; Provi | 97.91 | |
| cd07390 | 168 | MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro | 97.85 | |
| COG0737 | 517 | UshA 5'-nucleotidase/2',3'-cyclic phosphodiesteras | 97.84 | |
| PRK10966 | 407 | exonuclease subunit SbcD; Provisional | 97.83 | |
| PHA02546 | 340 | 47 endonuclease subunit; Provisional | 97.77 | |
| cd07380 | 150 | MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re | 97.72 | |
| cd08162 | 313 | MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA | 97.69 | |
| TIGR01530 | 550 | nadN NAD pyrophosphatase/5'-nucleotidase NadN. Thi | 97.67 | |
| PRK09558 | 551 | ushA bifunctional UDP-sugar hydrolase/5'-nucleotid | 97.58 | |
| PRK11907 | 814 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.43 | |
| cd07391 | 172 | MPP_PF1019 Pyrococcus furiosus PF1019 and related | 97.33 | |
| PRK09418 | 780 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.15 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.12 | |
| PHA02239 | 235 | putative protein phosphatase | 97.12 | |
| KOG2863 | 456 | consensus RNA lariat debranching enzyme [RNA proce | 97.1 | |
| COG1311 | 481 | HYS2 Archaeal DNA polymerase II, small subunit/DNA | 97.04 | |
| cd07423 | 234 | MPP_PrpE Bacillus subtilis PrpE and related protei | 96.99 | |
| PRK00166 | 275 | apaH diadenosine tetraphosphatase; Reviewed | 96.95 | |
| cd07387 | 257 | MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2 | 96.92 | |
| PRK13625 | 245 | bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision | 96.84 | |
| COG4186 | 186 | Predicted phosphoesterase or phosphohydrolase [Gen | 96.76 | |
| TIGR00024 | 225 | SbcD_rel_arch putative phosphoesterase, SbcD/Mre11 | 96.74 | |
| PRK09420 | 649 | cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosp | 96.71 | |
| TIGR01390 | 626 | CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphod | 96.67 | |
| COG1692 | 266 | Calcineurin-like phosphoesterase [General function | 96.34 | |
| cd07413 | 222 | MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat | 96.34 | |
| PRK09968 | 218 | serine/threonine-specific protein phosphatase 2; P | 96.23 | |
| PF13277 | 253 | YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C. | 96.16 | |
| PF00041 | 85 | fn3: Fibronectin type III domain; InterPro: IPR003 | 96.11 | |
| COG5555 | 392 | Cytolysin, a secreted calcineurin-like phosphatase | 96.01 | |
| cd07422 | 257 | MPP_ApaH Escherichia coli ApaH and related protein | 96.01 | |
| cd00144 | 225 | MPP_PPP_family phosphoprotein phosphatases of the | 95.93 | |
| cd07381 | 239 | MPP_CapA CapA and related proteins, metallophospha | 95.91 | |
| TIGR00668 | 279 | apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric | 95.81 | |
| cd07421 | 304 | MPP_Rhilphs Rhilph phosphatases, metallophosphatas | 95.76 | |
| smart00854 | 239 | PGA_cap Bacterial capsule synthesis protein PGA_ca | 95.59 | |
| COG1407 | 235 | Predicted ICC-like phosphoesterases [General funct | 95.12 | |
| PF09587 | 250 | PGA_cap: Bacterial capsule synthesis protein PGA_c | 94.1 | |
| cd07416 | 305 | MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca | 92.87 | |
| cd07420 | 321 | MPP_RdgC Drosophila melanogaster RdgC and related | 92.76 | |
| KOG4419 | 602 | consensus 5' nucleotidase [Nucleotide transport an | 92.66 | |
| smart00156 | 271 | PP2Ac Protein phosphatase 2A homologues, catalytic | 92.57 | |
| KOG2310 | 646 | consensus DNA repair exonuclease MRE11 [Replicatio | 92.57 | |
| cd07414 | 293 | MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme | 91.82 | |
| cd07415 | 285 | MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein | 91.51 | |
| PTZ00239 | 303 | serine/threonine protein phosphatase 2A; Provision | 90.8 | |
| cd07418 | 377 | MPP_PP7 PP7, metallophosphatase domain. PP7 is a p | 90.77 | |
| PTZ00480 | 320 | serine/threonine-protein phosphatase; Provisional | 90.12 | |
| PTZ00244 | 294 | serine/threonine-protein phosphatase PP1; Provisio | 89.23 | |
| cd07417 | 316 | MPP_PP5_C PP5, C-terminal metallophosphatase domai | 87.75 | |
| cd07419 | 311 | MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a | 87.52 | |
| KOG4221 | 1381 | consensus Receptor mediating netrin-dependent axon | 87.47 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 86.42 | |
| cd00063 | 93 | FN3 Fibronectin type 3 domain; One of three types | 85.55 | |
| smart00060 | 83 | FN3 Fibronectin type 3 domain. One of three types | 83.22 | |
| PF04042 | 209 | DNA_pol_E_B: DNA polymerase alpha/epsilon subunit | 82.66 | |
| KOG3325 | 183 | consensus Membrane coat complex Retromer, subunit | 81.19 |
| >KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-81 Score=626.88 Aligned_cols=395 Identities=39% Similarity=0.631 Sum_probs=334.1
Q ss_pred CCCccccCCCCcccccCCCCCCCCCCCCCcccccCCCCCCCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCC
Q 039280 8 GIPTTLEGPFKPVTAPLDKNLRLNVSDLPYVLQNNAQGEGFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELV 87 (487)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~ 87 (487)
+++...-|+..+...++.|++......++.. .+...+.|+||||++++..++|+|+|.|.+..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~peQvhlS~~~~~~~m~VswvT~~~~------------- 69 (452)
T KOG1378|consen 7 SQSEINPKHTLHDINPLPGTLHLLSESEQLT----FPSVVNSPEQVHLSFTDNLNEMRVSWVTGDGE------------- 69 (452)
T ss_pred eeeeccCCCccccccccCccccccccccccc----CcccCCCCCeEEEeccCCCCcEEEEEeCCCCC-------------
Confidence 3456677788888888888877777665553 11125679999999999888999999999752
Q ss_pred ccEEEEeccCCCCceE-EEEEEEEeeeecCCCCCCccccCcEEEEEeCCCCCCCEEEEEEecCCCCCcCceEEEEcCCCC
Q 039280 88 QSIVYFRVFRSSLTYQ-AEGYSLVYNQLYPPDGLQNYTSGIIHHVLITGLQPNTLYEYECGDPSISAMSSSHYFRTMPVS 166 (487)
Q Consensus 88 ~~~V~yg~~~~~~~~~-~~g~~~~~~~~~~~~g~~~~~~~~~h~v~l~gL~P~T~Y~Y~vg~~~~~~~s~~~~F~T~p~~ 166 (487)
.++|+||+..++.... +.+.+..+...+.. .+++++++|+|+|++|+|+|+||||||++. .||++|+|+|+|.
T Consensus 70 ~~~V~Yg~~~~~~~~~~~~~~~~~~~~~y~~---~~~~sg~ih~~~~~~L~~~t~YyY~~Gs~~--~wS~~f~F~t~p~- 143 (452)
T KOG1378|consen 70 ENVVRYGEVKDKLDNSAARGMTEAWTDGYAN---GWRDSGYIHDAVMKNLEPNTRYYYQVGSDL--KWSEIFSFKTPPG- 143 (452)
T ss_pred CceEEEeecCCCccccccccceEEEeccccc---ccceeeeEeeeeecCCCCCceEEEEeCCCC--CcccceEeECCCC-
Confidence 3799999876653332 35555555433222 136789999999999999999999999986 6999999999982
Q ss_pred CCCCCCcEEEEEecCCCCCChHHHHHHHHHc-CCCEEEEcCccccccccccCCCccccccccCCCCcccchhh-HHHHHH
Q 039280 167 GPSDYPNRIAVVGDLGLTYNTTTTVAHLMSN-HPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQ-PRWDYW 244 (487)
Q Consensus 167 ~~~~~~~~f~v~gD~~~~~~~~~~l~~l~~~-~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~-~~w~~~ 244 (487)
+..+.+|+++||+|.......++....+. ++|+|||+|||+|++++ + .+||+|
T Consensus 144 --~~~~~~~~i~GDlG~~~~~~s~~~~~~~~~k~d~vlhiGDlsYa~~~-----------------------~n~~wD~f 198 (452)
T KOG1378|consen 144 --QDSPTRAAIFGDMGCTEPYTSTLRNQEENLKPDAVLHIGDLSYAMGY-----------------------SNWQWDEF 198 (452)
T ss_pred --ccCceeEEEEccccccccccchHhHHhcccCCcEEEEecchhhcCCC-----------------------CccchHHH
Confidence 23589999999999987776777777665 49999999999998654 2 489999
Q ss_pred HHhhhccccCCCEEEecCCcccccCccchhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCcccC--CCChHHH
Q 039280 245 GRYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYIDY--DKSSDQY 322 (487)
Q Consensus 245 ~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~~--~~~~~Q~ 322 (487)
+++++++++.+|+|++.||||++..... .|..|.+||.||.+++.+..++||||++|++|||+|+|+.++ ....+|+
T Consensus 199 ~r~vEp~As~vPymv~~GNHE~d~~~~~-~F~~y~~Rf~mP~~~s~s~~~l~YSfd~G~vhfv~lsse~~~~~~~~~~QY 277 (452)
T KOG1378|consen 199 GRQVEPIASYVPYMVCSGNHEIDWPPQP-CFVPYSARFNMPGNSSESDSNLYYSFDVGGVHFVVLSTETYYNFLKGTAQY 277 (452)
T ss_pred HhhhhhhhccCceEEecccccccCCCcc-cccccceeeccCCCcCCCCCceeEEEeeccEEEEEEeccccccccccchHH
Confidence 9999999999999999999999865443 699999999999998877788999999999999999999875 3478999
Q ss_pred HHHHHHhcccCCCCCCeEEEEcCCCccccCCC-CcchhH--HHHHHHHHHHHHcCCcEEEeCccccceecccccCCcc--
Q 039280 323 KWLESDLGDVDREVTPWLIAAWHPPWYSTYSA-HYREVE--CMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSL-- 397 (487)
Q Consensus 323 ~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~-~~~~~~--~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~p~~~~~~-- 397 (487)
+||+++|++++|+++||+||+.|+|||+++.. +..+.+ .+|+.||+||.+|+||+||+||+|+|||++|++|.++
T Consensus 278 ~WL~~dL~~v~r~~tPWlIv~~HrP~Y~S~~~~~~reG~~~~~~~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~~~ 357 (452)
T KOG1378|consen 278 QWLERDLASVDRKKTPWLIVQGHRPMYCSSNDAHYREGEFESMREGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTCGT 357 (452)
T ss_pred HHHHHHHHHhcccCCCeEEEEecccceecCCchhhccCcchhhHHHHHHHHHHhceeEEEeccceehhccchhhcceeec
Confidence 99999999999887999999999999998865 555555 7899999999999999999999999999999999887
Q ss_pred --------CCCCcEEEEeCCccccCCcccccCCCCCCCCCCCCCCCCCCccccccccCCCCCCcccCCCCCccceecCCc
Q 039280 398 --------DPCGPVYILVGDGGNVEGLDIVHADEPGNCPEPSTTPDMGGSCAFNFTSGPASGKFCWDRQPDYSAYRESSF 469 (487)
Q Consensus 398 --------~~~g~vyIv~G~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~r~~~~ 469 (487)
+++||+||++|+||+.|+++.. . .+||+|||||+.+|
T Consensus 358 ~~~~~~~~d~~aPvyI~~G~~G~~e~~~~~-------------------------~----------~~~p~~Sa~R~~df 402 (452)
T KOG1378|consen 358 GWGPVHLVDGMAPIYITVGDGGNHEHLDPF-------------------------S----------SPQPEWSAFREGDF 402 (452)
T ss_pred cCCcccccCCCCCEEEEEccCCcccccCcc-------------------------c----------CCCCcccccccccC
Confidence 8899999999999999988741 1 26899999999999
Q ss_pred ceEEEEEEccceeEEee
Q 039280 470 GHGILEVLISLSIALTT 486 (487)
Q Consensus 470 G~~~l~~~n~t~~~~~~ 486 (487)
||++|++.|.||++|++
T Consensus 403 G~~~L~v~N~TH~~~~~ 419 (452)
T KOG1378|consen 403 GYTRLTAKNGTHAHVHW 419 (452)
T ss_pred CeEEEEEecCceEEEEE
Confidence 99999999999999986
|
|
| >PLN02533 probable purple acid phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-77 Score=616.76 Aligned_cols=357 Identities=46% Similarity=0.814 Sum_probs=310.0
Q ss_pred CCCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCcccc
Q 039280 46 EGFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTS 125 (487)
Q Consensus 46 ~~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~ 125 (487)
....|+||||++++ +++|+|+|.|.+. ..+.|+||++++.+..++.|++.+|... ..+.+
T Consensus 40 ~~~~P~qvhls~~~-~~~m~V~W~T~~~-------------~~~~V~yG~~~~~l~~~a~g~~~~~~~~------~~~~~ 99 (427)
T PLN02533 40 DPTHPDQVHISLVG-PDKMRISWITQDS-------------IPPSVVYGTVSGKYEGSANGTSSSYHYL------LIYRS 99 (427)
T ss_pred CCCCCceEEEEEcC-CCeEEEEEECCCC-------------CCCEEEEecCCCCCcceEEEEEEEEecc------ccccC
Confidence 36789999999998 8999999999874 2479999999999999999998887631 13567
Q ss_pred CcEEEEEeCCCCCCCEEEEEEecCCCCCcCceEEEEcCCCCCCCCCCcEEEEEecCCCCCChHHHHHHHHHcCCCEEEEc
Q 039280 126 GIIHHVLITGLQPNTLYEYECGDPSISAMSSSHYFRTMPVSGPSDYPNRIAVVGDLGLTYNTTTTVAHLMSNHPDLLLLI 205 (487)
Q Consensus 126 ~~~h~v~l~gL~P~T~Y~Y~vg~~~~~~~s~~~~F~T~p~~~~~~~~~~f~v~gD~~~~~~~~~~l~~l~~~~pdfvl~~ 205 (487)
+++|+|+|+||+|+|+|+||||.. .+|++++|+|+|.. .++||+++||+|.......+++++.+.+|||||++
T Consensus 100 g~iH~v~l~~L~p~T~Y~Yrvg~~---~~s~~~~F~T~p~~----~~~~f~v~GDlG~~~~~~~tl~~i~~~~pD~vl~~ 172 (427)
T PLN02533 100 GQINDVVIGPLKPNTVYYYKCGGP---SSTQEFSFRTPPSK----FPIKFAVSGDLGTSEWTKSTLEHVSKWDYDVFILP 172 (427)
T ss_pred CeEEEEEeCCCCCCCEEEEEECCC---CCccceEEECCCCC----CCeEEEEEEeCCCCcccHHHHHHHHhcCCCEEEEc
Confidence 899999999999999999999964 46899999998853 37999999999977656678899988999999999
Q ss_pred CccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhhhccccCCCEEEecCCcccccCc--cchhhHHhhcccC
Q 039280 206 GDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIERQA--ENQTFAAYSSRFA 283 (487)
Q Consensus 206 GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~~~l~~~~P~~~v~GNHD~~~~~--~~~~~~~y~~~f~ 283 (487)
||++|++. |+.+|+.|++.++++.+.+|+|+++||||..... ....|..|..+|.
T Consensus 173 GDl~y~~~-----------------------~~~~wd~f~~~i~~l~s~~P~m~~~GNHE~~~~~~~~~~~f~~y~~rf~ 229 (427)
T PLN02533 173 GDLSYANF-----------------------YQPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPILHPEKFTAYNARWR 229 (427)
T ss_pred Cccccccc-----------------------hHHHHHHHHHHhhhHhhcCceEEeCccccccccccccCcCccchhhccc
Confidence 99999642 3578999999999999999999999999986432 2346778999999
Q ss_pred CCCCCCCCCCcceEEEEeCCEEEEEEcCcccCCCChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcch--hHH
Q 039280 284 FPSEESGSSSSLYYSFNAGGIHFVMLSAYIDYDKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYRE--VEC 361 (487)
Q Consensus 284 ~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~--~~~ 361 (487)
||.++.+...+.||||++|++|||+||++.++....+|++||+++|++++|+.+||+||++|+|+|++...+..+ ...
T Consensus 230 mP~~~~g~~~~~yYSfd~g~vhfI~Lds~~~~~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~y~s~~~~~~~~~~~~ 309 (427)
T PLN02533 230 MPFEESGSTSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVG 309 (427)
T ss_pred CCccccCCCCCceEEEEECCEEEEEEeCCccccCchHHHHHHHHHHHhhcccCCCEEEEEeCCCeeecccccCCcchhHH
Confidence 998766666789999999999999999998887889999999999999988889999999999999876544322 345
Q ss_pred HHHHHHHHHHHcCCcEEEeCccccceecccccCCccCCCCcEEEEeCCccccCCcccccCCCCCCCCCCCCCCCCCCccc
Q 039280 362 MRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDGGNVEGLDIVHADEPGNCPEPSTTPDMGGSCA 441 (487)
Q Consensus 362 ~r~~l~~l~~~~~VdlvlsGH~H~yeR~~p~~~~~~~~~g~vyIv~G~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (487)
+|+.|++||++|+|||+|+||+|.|||++|+++++++++|++||++|+||+.|++...+
T Consensus 310 ~r~~le~Ll~~~~VdlvlsGH~H~YeR~~p~~~~~~~~~gpvyiv~G~gG~~e~~~~~~--------------------- 368 (427)
T PLN02533 310 MKESMETLLYKARVDLVFAGHVHAYERFDRVYQGKTDKCGPVYITIGDGGNREGLATKY--------------------- 368 (427)
T ss_pred HHHHHHHHHHHhCCcEEEecceecccccccccCCccCCCCCEEEEeCCCcccccccccc---------------------
Confidence 78899999999999999999999999999999999999999999999999998764211
Q ss_pred cccccCCCCCCcccCCCCCccceecCCcceEEEEEEccceeEEee
Q 039280 442 FNFTSGPASGKFCWDRQPDYSAYRESSFGHGILEVLISLSIALTT 486 (487)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~s~~r~~~~G~~~l~~~n~t~~~~~~ 486 (487)
..++|+||+||+.+|||++|+|+|+|||+||.
T Consensus 369 -------------~~~~~~~s~~r~~~~G~~~l~v~n~t~l~~~~ 400 (427)
T PLN02533 369 -------------IDPKPDISLFREASFGHGQLNVVDANTMEWTW 400 (427)
T ss_pred -------------CCCCCCceeEEeccCCEEEEEEEcCCeEEEEE
Confidence 14678999999999999999999999999985
|
|
| >cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-45 Score=363.19 Aligned_cols=260 Identities=47% Similarity=0.789 Sum_probs=205.9
Q ss_pred CCcEEEEEecCCCC-CChHHHHHHHHH--cCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHh
Q 039280 171 YPNRIAVVGDLGLT-YNTTTTVAHLMS--NHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRY 247 (487)
Q Consensus 171 ~~~~f~v~gD~~~~-~~~~~~l~~l~~--~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~ 247 (487)
.++||+++||+|.. .....++++|.+ .+|||||++||++|+++.. .+.+|+.|++.
T Consensus 3 ~~~~f~v~gD~~~~~~~~~~~~~~l~~~~~~~d~vl~~GDl~~~~~~~---------------------~~~~~~~~~~~ 61 (294)
T cd00839 3 TPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADGYN---------------------NGSRWDTFMRQ 61 (294)
T ss_pred CcEEEEEEEECCCCCCCcHHHHHHHHhccCCccEEEEcCchhhhcCCc---------------------cchhHHHHHHH
Confidence 37999999999973 456778888887 6899999999999864220 12578999999
Q ss_pred hhccccCCCEEEecCCcccccCccchhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCcccC---CCChHHHHH
Q 039280 248 MQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYIDY---DKSSDQYKW 324 (487)
Q Consensus 248 ~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~~---~~~~~Q~~W 324 (487)
++++.+.+|+++++||||............+..++.++........+.||+|++|++|||+|||+... ....+|++|
T Consensus 62 ~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~~~~q~~W 141 (294)
T cd00839 62 IEPLASYVPYMVTPGNHEADYNFSFYKIKAFFPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDW 141 (294)
T ss_pred HHHHHhcCCcEEcCcccccccCCCCcccccccccccccCCCCCCCCCceEEEeeCCEEEEEEecccccccCCCCcHHHHH
Confidence 99998899999999999997543221111111123334333334567899999999999999998765 568999999
Q ss_pred HHHHhcccCCCCCCeEEEEcCCCccccCCCCcc--hhHHHHHHHHHHHHHcCCcEEEeCccccceecccccCCcc-----
Q 039280 325 LESDLGDVDREVTPWLIAAWHPPWYSTYSAHYR--EVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSL----- 397 (487)
Q Consensus 325 L~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~--~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~p~~~~~~----- 397 (487)
|+++|+++++++.||+||++|+|+|+....... .....++.|++||++|+|+++|+||+|.|+|++|++++++
T Consensus 142 L~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~~~~~~ 221 (294)
T cd00839 142 LEADLAKVDRSKTPWIIVMGHRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVVGDCN 221 (294)
T ss_pred HHHHHHHhcccCCCeEEEEeccCcEecCccccccchhHHHHHHHHHHHHHhCCCEEEEccceeeEeechhhCCEeccccc
Confidence 999999987667799999999999986543322 2456789999999999999999999999999999988653
Q ss_pred ---CCCCcEEEEeCCccccCCcccccCCCCCCCCCCCCCCCCCCccccccccCCCCCCcccCCCCCccceecCCcceEEE
Q 039280 398 ---DPCGPVYILVGDGGNVEGLDIVHADEPGNCPEPSTTPDMGGSCAFNFTSGPASGKFCWDRQPDYSAYRESSFGHGIL 474 (487)
Q Consensus 398 ---~~~g~vyIv~G~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~r~~~~G~~~l 474 (487)
+++|++||++|+||+.+...... .+.++|++++...|||++|
T Consensus 222 ~~~~~~g~~yiv~G~~G~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~g~~~~ 266 (294)
T cd00839 222 PYSNPKGPVHIVIGAGGNDEGLDPFS-----------------------------------APPPAWSAFRESDYGFGRL 266 (294)
T ss_pred cccCCCccEEEEECCCccccCcCccc-----------------------------------CCCCCceEEEeccCCEEEE
Confidence 68899999999999976543100 1225899999999999999
Q ss_pred EEEccceeEEee
Q 039280 475 EVLISLSIALTT 486 (487)
Q Consensus 475 ~~~n~t~~~~~~ 486 (487)
+|.|.|||.||.
T Consensus 267 ~~~~~t~l~~~~ 278 (294)
T cd00839 267 TVHNSTHLHFEW 278 (294)
T ss_pred EEEecCeEEEEE
Confidence 999999999985
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver |
| >cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-31 Score=262.26 Aligned_cols=240 Identities=23% Similarity=0.363 Sum_probs=168.9
Q ss_pred cEEEEEecCCCCC-C-hHHH---HHHHH-HcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHH-HHHH
Q 039280 173 NRIAVVGDLGLTY-N-TTTT---VAHLM-SNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRW-DYWG 245 (487)
Q Consensus 173 ~~f~v~gD~~~~~-~-~~~~---l~~l~-~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w-~~~~ 245 (487)
++|+++||+|... . ...+ +.++. +.+|||||++||++|+++.... +..+| +.|.
T Consensus 1 ~~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~-------------------~~~~~~~~~~ 61 (277)
T cd07378 1 LRFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSV-------------------DDPRFETTFE 61 (277)
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCC-------------------cchHHHHHHH
Confidence 4899999999862 2 2222 33333 3689999999999997543110 01233 3455
Q ss_pred HhhhccccCCCEEEecCCcccccCccch-hhHH--hhcccCCCCCCCCCCCcceEEEEeC------CEEEEEEcCcccC-
Q 039280 246 RYMQPLVSNVPTMVIEGEHEIERQAENQ-TFAA--YSSRFAFPSEESGSSSSLYYSFNAG------GIHFVMLSAYIDY- 315 (487)
Q Consensus 246 ~~~~~l~~~~P~~~v~GNHD~~~~~~~~-~~~~--y~~~f~~P~~~~~~~~~~yYsf~~g------~v~fi~Ldt~~~~- 315 (487)
+.++.+..++|+++++||||........ .+.. +..++.+ ...||+|+++ +++||+|||....
T Consensus 62 ~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~--------~~~~y~~~~~~~~~~~~~~~i~LDt~~~~~ 133 (277)
T cd07378 62 DVYSAPSLQVPWYLVLGNHDYSGNVSAQIDYTKRPNSPRWTM--------PAYYYRVSFPFPSSDTTVEFIMIDTVPLCG 133 (277)
T ss_pred HHccchhhcCCeEEecCCcccCCCchheeehhccCCCCCccC--------cchheEEEeecCCCCCEEEEEEEeChhHcC
Confidence 5555555689999999999997432110 0111 1222333 3469999998 7999999997532
Q ss_pred --------------CCChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeC
Q 039280 316 --------------DKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNG 381 (487)
Q Consensus 316 --------------~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsG 381 (487)
....+|++||+++|+++. .+|+||++|+|+++..... .....++.|++++++++|+++|+|
T Consensus 134 ~~~~~~~~~~~~~~~~~~~Q~~wL~~~L~~~~---~~~~iv~~H~P~~~~~~~~--~~~~~~~~l~~l~~~~~v~~vl~G 208 (277)
T cd07378 134 NSDDIASPYGPPNGKLAEEQLAWLEKTLAAST---ADWKIVVGHHPIYSSGEHG--PTSCLVDRLLPLLKKYKVDAYLSG 208 (277)
T ss_pred ccccccccccCcchhhHHHHHHHHHHHHHhcC---CCeEEEEeCccceeCCCCC--CcHHHHHHHHHHHHHcCCCEEEeC
Confidence 136899999999999863 3799999999999764322 224568899999999999999999
Q ss_pred ccccceecccccCCccCCCCcEEEEeCCccccCCcccccCCCCCCCCCCCCCCCCCCccccccccCCCCCCcccCCCCCc
Q 039280 382 HVHAYERSNRVYNYSLDPCGPVYILVGDGGNVEGLDIVHADEPGNCPEPSTTPDMGGSCAFNFTSGPASGKFCWDRQPDY 461 (487)
Q Consensus 382 H~H~yeR~~p~~~~~~~~~g~vyIv~G~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (487)
|.|.+++..+ ...|+.||++|+||...+.... . ...+|+|
T Consensus 209 H~H~~~~~~~------~~~~~~~i~~G~~~~~~~~~~~---------~-------------------------~~~~~~~ 248 (277)
T cd07378 209 HDHNLQHIKD------DGSGTSFVVSGAGSKARPSVKH---------I-------------------------DKVPQFF 248 (277)
T ss_pred Ccccceeeec------CCCCcEEEEeCCCcccCCCCCc---------c-------------------------Ccccccc
Confidence 9999998853 2369999999999886543210 0 0123578
Q ss_pred cceecCCcceEEEEEEccceeEEe
Q 039280 462 SAYRESSFGHGILEVLISLSIALT 485 (487)
Q Consensus 462 s~~r~~~~G~~~l~~~n~t~~~~~ 485 (487)
+.++...+||.+|+|.+. +|.++
T Consensus 249 ~~~~~~~~Gy~~i~v~~~-~l~~~ 271 (277)
T cd07378 249 SGFTSSGGGFAYLELTKE-ELTVR 271 (277)
T ss_pred cccccCCCCEEEEEEecC-EEEEE
Confidence 999999999999999876 56654
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma |
| >PTZ00422 glideosome-associated protein 50; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=261.89 Aligned_cols=237 Identities=19% Similarity=0.282 Sum_probs=169.7
Q ss_pred CcEEEEEecCCCCCChHHHHHHHH-----HcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHH-HH
Q 039280 172 PNRIAVVGDLGLTYNTTTTVAHLM-----SNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDY-WG 245 (487)
Q Consensus 172 ~~~f~v~gD~~~~~~~~~~l~~l~-----~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~-~~ 245 (487)
.++|+++||+|.+...+..+++.+ +.++||||.+||+. .+|.. + ...++|++ |.
T Consensus 26 ~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF-~~Gv~--s-----------------v~Dp~f~~~FE 85 (394)
T PTZ00422 26 QLRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNF-PGGVD--G-----------------LNDPKWKHCFE 85 (394)
T ss_pred eEEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccc-cCCCC--C-----------------ccchhHHhhHh
Confidence 689999999997655554444332 35899999999998 44431 1 11356655 44
Q ss_pred Hhhhccc--cCCCEEEecCCcccccCccchh--hH------------H------hhcccCCCCCCCCCCCcceEEE----
Q 039280 246 RYMQPLV--SNVPTMVIEGEHEIERQAENQT--FA------------A------YSSRFAFPSEESGSSSSLYYSF---- 299 (487)
Q Consensus 246 ~~~~~l~--~~~P~~~v~GNHD~~~~~~~~~--~~------------~------y~~~f~~P~~~~~~~~~~yYsf---- 299 (487)
+...... ..+||++++||||+.++...+- +. . ...||.||. .||.+
T Consensus 86 ~vY~~~s~~L~~Pwy~vLGNHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~--------~yY~~~~~f 157 (394)
T PTZ00422 86 NVYSEESGDMQIPFFTVLGQADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPN--------YWYHYFTHF 157 (394)
T ss_pred hhccCcchhhCCCeEEeCCcccccCCchhhhccccccccccccccccccccccccCCCccCCc--------hhheeeeee
Confidence 4444443 5799999999999975543211 10 0 124777774 47754
Q ss_pred Ee-------------CCEEEEEEcCccc-----C-CCChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhH
Q 039280 300 NA-------------GGIHFVMLSAYID-----Y-DKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVE 360 (487)
Q Consensus 300 ~~-------------g~v~fi~Ldt~~~-----~-~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~ 360 (487)
.. ..+.||+|||..- + .....|++||+++|+.+ ++.++|+||++|||+|+++.. ....
T Consensus 158 ~~~~~~~~~~~~~~~~~v~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a-~k~a~WkIVvGHhPIySsG~h--g~~~ 234 (394)
T PTZ00422 158 TDTSGPSLLKSGHKDMSVAFIFIDTWILSSSFPYKKVSERAWQDLKATLEYA-PKIADYIIVVGDKPIYSSGSS--KGDS 234 (394)
T ss_pred ecccccccccccCCCCEEEEEEEECchhcccCCccccCHHHHHHHHHHHHhh-ccCCCeEEEEecCceeecCCC--CCCH
Confidence 22 1289999999632 1 12578999999999654 356789999999999987642 2345
Q ss_pred HHHHHHHHHHHHcCCcEEEeCccccceecccccCCccCCCCcEEEEeCCccccCCcccccCCCCCCCCCCCCCCCCCCcc
Q 039280 361 CMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDGGNVEGLDIVHADEPGNCPEPSTTPDMGGSC 440 (487)
Q Consensus 361 ~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~p~~~~~~~~~g~vyIv~G~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (487)
++++.|+|||++|+||++|+||+|++||.. +.|+.||++|+||...+...
T Consensus 235 ~L~~~L~PLL~ky~VdlYisGHDH~lq~i~--------~~gt~yIvSGaGs~~~~~~~---------------------- 284 (394)
T PTZ00422 235 YLSYYLLPLLKDAQVDLYISGYDRNMEVLT--------DEGTAHINCGSGGNSGRKSI---------------------- 284 (394)
T ss_pred HHHHHHHHHHHHcCcCEEEEccccceEEec--------CCCceEEEeCccccccCCCC----------------------
Confidence 789999999999999999999999999973 46899999999998543210
Q ss_pred ccccccCCCCCCcccCCCCCccceecCCcceEEEEEEccceeEEee
Q 039280 441 AFNFTSGPASGKFCWDRQPDYSAYRESSFGHGILEVLISLSIALTT 486 (487)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~s~~r~~~~G~~~l~~~n~t~~~~~~ 486 (487)
...+|+.|....+||..++ .+.+.|.++-
T Consensus 285 ----------------~~~~~s~F~~~~~GF~~~~-l~~~~l~~~f 313 (394)
T PTZ00422 285 ----------------MKNSKSLFYSEDIGFCIHE-LNAEGMVTKF 313 (394)
T ss_pred ----------------CCCCCcceecCCCCEEEEE-EecCEEEEEE
Confidence 1136788998999999999 6777777653
|
|
| >cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.7e-27 Score=228.81 Aligned_cols=205 Identities=21% Similarity=0.337 Sum_probs=147.7
Q ss_pred CCcEEEEEecCCCCCC-----------------hHHHHHHHHHc--CCCEEEEcCccccccccccCCCccccccccCCCC
Q 039280 171 YPNRIAVVGDLGLTYN-----------------TTTTVAHLMSN--HPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIES 231 (487)
Q Consensus 171 ~~~~f~v~gD~~~~~~-----------------~~~~l~~l~~~--~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~ 231 (487)
.+++|+++||+|.+.. ....++.+.+. +||||+++||+++.. ..
T Consensus 3 ~~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~------~~----------- 65 (262)
T cd07395 3 GPFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAM------PG----------- 65 (262)
T ss_pred CCEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCC------cc-----------
Confidence 3799999999998731 12334555555 899999999999631 10
Q ss_pred cccchhhHHHHHHHHhhhccccCCCEEEecCCcccccCccchhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcC
Q 039280 232 PIQETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSA 311 (487)
Q Consensus 232 ~~~~~y~~~w~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt 311 (487)
.+....+|+.+.+.++.+...+|+++++||||+........+..|...| +..||+|++++++||+|||
T Consensus 66 --~~~~~~~~~~~~~~~~~~~~~vp~~~i~GNHD~~~~~~~~~~~~f~~~~----------g~~~y~~~~~~~~~i~lds 133 (262)
T cd07395 66 --DELRERQVSDLKDVLSLLDPDIPLVCVCGNHDVGNTPTEESIKDYRDVF----------GDDYFSFWVGGVFFIVLNS 133 (262)
T ss_pred --hhhHHHHHHHHHHHHhhccCCCcEEEeCCCCCCCCCCChhHHHHHHHHh----------CCcceEEEECCEEEEEecc
Confidence 0111245777777777776789999999999986433222334444444 2358999999999999999
Q ss_pred cccC------CCChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCc----chhHHHHHHHHHHHHHcCCcEEEeC
Q 039280 312 YIDY------DKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHY----REVECMRVEMEDLLYYYGVDIVFNG 381 (487)
Q Consensus 312 ~~~~------~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~----~~~~~~r~~l~~l~~~~~VdlvlsG 381 (487)
.... ....+|++||+++|+++.+.+.+++||++|+|++....... ......++.|.++|++++|+++|||
T Consensus 134 ~~~~~~~~~~~~~~~ql~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~v~~G 213 (262)
T cd07395 134 QLFFDPSEVPELAQAQDVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSYFNIPKSVRKPLLDKFKKAGVKAVFSG 213 (262)
T ss_pred ccccCccccccchHHHHHHHHHHHHHHHhccCCcEEEEECcCCccCCCCCCcccCCcCHHHHHHHHHHHHhcCceEEEEC
Confidence 6432 23579999999999987534556899999999986432211 1224567899999999999999999
Q ss_pred ccccceecccccCCccCCCCcEEEEeCCccc
Q 039280 382 HVHAYERSNRVYNYSLDPCGPVYILVGDGGN 412 (487)
Q Consensus 382 H~H~yeR~~p~~~~~~~~~g~vyIv~G~gG~ 412 (487)
|+|.+.+.. -.|+.+++++++|.
T Consensus 214 H~H~~~~~~--------~~g~~~~~~~~~~~ 236 (262)
T cd07395 214 HYHRNAGGR--------YGGLEMVVTSAIGA 236 (262)
T ss_pred ccccCCceE--------ECCEEEEEcCceec
Confidence 999987642 24788888888776
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th |
| >PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: |
Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-23 Score=221.70 Aligned_cols=261 Identities=24% Similarity=0.344 Sum_probs=140.1
Q ss_pred cCcEEEEEeCCCCCCCEEEEEEecCCCCCcCceEEEEcCCCCCCCCCCcEEEEEecCCCCCChHHHHHHHHH-cCCCEEE
Q 039280 125 SGIIHHVLITGLQPNTLYEYECGDPSISAMSSSHYFRTMPVSGPSDYPNRIAVVGDLGLTYNTTTTVAHLMS-NHPDLLL 203 (487)
Q Consensus 125 ~~~~h~v~l~gL~P~T~Y~Y~vg~~~~~~~s~~~~F~T~p~~~~~~~~~~f~v~gD~~~~~~~~~~l~~l~~-~~pdfvl 203 (487)
..+++++.|+||+|+|+|+|||........|...+|+|+|.... .++||+++||.+.......++.+|.+ .+|||+|
T Consensus 60 ~d~t~~v~v~gL~p~t~Y~Y~~~~~~~~~~s~~g~~rT~p~~~~--~~~r~a~~SC~~~~~~~~~~~~~~a~~~~~D~~l 137 (453)
T PF09423_consen 60 RDFTVKVDVTGLQPGTRYYYRFVVDGGGQTSPVGRFRTAPDGDP--DPFRFAFGSCQNYEDGYFPAYRRIAERDDPDFVL 137 (453)
T ss_dssp GTTEEEEEE-S--TT-EEEEEEEE--TTEE---EEEE--TT-------EEEEEE----CCC---HHHHHHTT-S--SEEE
T ss_pred CCeEeecccCCCCCCceEEEEEEEecCCCCCCceEEEcCCCCCC--CceEEEEECCCCcccChHHHHHhhhccCCCcEEE
Confidence 45899999999999999999999854357888999999976543 36999999999876556778888888 6999999
Q ss_pred EcCccccccccccCCC--ccccccccC--CCCcccchhhHHHHHHH--HhhhccccCCCEEEecCCcccccCccc-----
Q 039280 204 LIGDLSYADLYLTNGT--KSSCYLCQS--IESPIQETYQPRWDYWG--RYMQPLVSNVPTMVIEGEHEIERQAEN----- 272 (487)
Q Consensus 204 ~~GDl~y~d~~~~~g~--~~~~~~~~~--~~~~~~~~y~~~w~~~~--~~~~~l~~~~P~~~v~GNHD~~~~~~~----- 272 (487)
|+||.+|+|....-+. .....+... ......+.|+.+|..+. ..++.+.+.+|+++++.+||+.++...
T Consensus 138 ~lGD~IY~d~~~~~~~~~~~~~~r~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwDDHdi~nn~~~~~~~~ 217 (453)
T PF09423_consen 138 HLGDQIYEDGGGGYGNLSRRPIGRAPEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWDDHDIGNNWWGDGAEN 217 (453)
T ss_dssp E-S-SS----TTSS--TT---S-----SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---STTTSTT-BTTB-ST
T ss_pred EeCCeeeccCCcccccccccccccccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEccCceecccccCCcccc
Confidence 9999999874100000 000000000 01223445666666543 236677789999999999999765431
Q ss_pred -----h--------hhHHhhcccCCCCCC-CCCCCcceEEEEeCC-EEEEEEcCcccCC---------------------
Q 039280 273 -----Q--------TFAAYSSRFAFPSEE-SGSSSSLYYSFNAGG-IHFVMLSAYIDYD--------------------- 316 (487)
Q Consensus 273 -----~--------~~~~y~~~f~~P~~~-~~~~~~~yYsf~~g~-v~fi~Ldt~~~~~--------------------- 316 (487)
. .+..|....+..... .......|++|++|+ +.|++||+....+
T Consensus 218 ~~~~~~~~~~~~~~a~~ay~e~~p~r~~~~~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~~~~~~~~~~~~~~~~m 297 (453)
T PF09423_consen 218 HQDTSGDFQDRRRAAYQAYFEYQPVRNPDPPGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPCDGPGDTCPAADDPSRTM 297 (453)
T ss_dssp T---HHHHHHHHHHHHHHHHHHS---GGG-BTTB----EEEEETTTEEEEE--SSSS----CCCSSEE--HHHH-TT--S
T ss_pred ccccccchHHHHHHHHHHHHhhcCccCCCccCCCCceEEEEecCCceeEEEEechhccccccccccccccccccCCccCc
Confidence 0 112233322221111 112356789999999 9999999864321
Q ss_pred CChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccC-----------CCCcchhHHHHHHHHHHHHHcCCc--EEEeCcc
Q 039280 317 KSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTY-----------SAHYREVECMRVEMEDLLYYYGVD--IVFNGHV 383 (487)
Q Consensus 317 ~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~-----------~~~~~~~~~~r~~l~~l~~~~~Vd--lvlsGH~ 383 (487)
.+.+|++||++.|++ +.++|+|+..-.|+.... ...+......|++|.++|.+.++. ++|+|.+
T Consensus 298 LG~~Q~~wL~~~L~~---s~a~~kvi~s~v~~~~~~~~~~~~~~~~~~d~W~g~~~er~~Ll~~l~~~~~~~vV~LSGDv 374 (453)
T PF09423_consen 298 LGEEQWDWLEDWLAS---SQATWKVIGSSVPFSPLNFPDAAEGLPFNMDSWDGYPAERQRLLDFLRESGIRNVVFLSGDV 374 (453)
T ss_dssp S-HHHHHHHHHHHHH-----SSEEEEE-SS--S---SS-SS-S--EETTSGGGSHHHHHHHHHHHHHTT---EEEEE-SS
T ss_pred CCHHHHHHHHHHHhc---CCCcEEEEEeCCceecccccccccccccCCCchhhCHHHHHHHHHHHHhhCCCCEEEEecCc
Confidence 378999999999998 458999999988865432 123344556689999999998875 7799999
Q ss_pred ccceecc
Q 039280 384 HAYERSN 390 (487)
Q Consensus 384 H~yeR~~ 390 (487)
|......
T Consensus 375 H~~~~~~ 381 (453)
T PF09423_consen 375 HASAASR 381 (453)
T ss_dssp SSEEEEE
T ss_pred chheeee
Confidence 9887663
|
|
| >cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-23 Score=203.52 Aligned_cols=192 Identities=20% Similarity=0.303 Sum_probs=135.6
Q ss_pred EEEEEecCCCCCCh-------------HHHHHHHHHc--CCCEEEEcCccccccccccCCCccccccccCCCCcccchhh
Q 039280 174 RIAVVGDLGLTYNT-------------TTTVAHLMSN--HPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQ 238 (487)
Q Consensus 174 ~f~v~gD~~~~~~~-------------~~~l~~l~~~--~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~ 238 (487)
||++++|+|.+... .++++.+.+. +||+||++||+++. +. .
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~------~~------------------~ 56 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDD------GS------------------P 56 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCC------CC------------------H
Confidence 69999999987431 2345555565 89999999999953 21 1
Q ss_pred HHHHHHHHhhhccccCCCEEEecCCcccccCccchhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCcccC---
Q 039280 239 PRWDYWGRYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYIDY--- 315 (487)
Q Consensus 239 ~~w~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~~--- 315 (487)
..|+.+.+.++.+ .+|++.++||||... . +...|..... .....+|+|+.++++||+||+....
T Consensus 57 ~~~~~~~~~l~~~--~~p~~~v~GNHD~~~-----~---~~~~~~~~~~---~~~~~~~~~~~~~~~~i~lds~~~~~~~ 123 (240)
T cd07402 57 ESYERLRELLAAL--PIPVYLLPGNHDDRA-----A---MRAVFPELPP---APGFVQYVVDLGGWRLILLDSSVPGQHG 123 (240)
T ss_pred HHHHHHHHHHhhc--CCCEEEeCCCCCCHH-----H---HHHhhccccc---cccccceeEecCCEEEEEEeCCCCCCcC
Confidence 3455666666665 789999999999841 1 2222211100 1245688999999999999986532
Q ss_pred -CCChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcch-hHHHHHHHHHHHHHc-CCcEEEeCccccceecccc
Q 039280 316 -DKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYRE-VECMRVEMEDLLYYY-GVDIVFNGHVHAYERSNRV 392 (487)
Q Consensus 316 -~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~-~~~~r~~l~~l~~~~-~VdlvlsGH~H~yeR~~p~ 392 (487)
....+|++||++.|++.. ..++|+++|+|++......... ....++.+.+++.++ +|+++|+||+|.....
T Consensus 124 ~~~~~~ql~wL~~~L~~~~---~~~~il~~H~pp~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~--- 197 (240)
T cd07402 124 GELCAAQLDWLEAALAEAP---DKPTLVFLHHPPFPVGIAWMDAIGLRNAEALAAVLARHPNVRAILCGHVHRPIDG--- 197 (240)
T ss_pred CEECHHHHHHHHHHHHhCC---CCCEEEEECCCCccCCchhhhhhhCCCHHHHHHHHhcCCCeeEEEECCcCchHHe---
Confidence 236899999999999864 2358899999987643211111 111267899999999 9999999999987655
Q ss_pred cCCccCCCCcEEEEeCCcccc
Q 039280 393 YNYSLDPCGPVYILVGDGGNV 413 (487)
Q Consensus 393 ~~~~~~~~g~vyIv~G~gG~~ 413 (487)
..+|+.++++|+.|..
T Consensus 198 -----~~~g~~~~~~gs~~~~ 213 (240)
T cd07402 198 -----SWGGIPLLTAPSTCHQ 213 (240)
T ss_pred -----EECCEEEEEcCcceee
Confidence 2378899999998874
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa |
| >cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-23 Score=205.75 Aligned_cols=198 Identities=19% Similarity=0.276 Sum_probs=136.2
Q ss_pred cEEEEEecCCCCCC--------------hHHHHHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhh
Q 039280 173 NRIAVVGDLGLTYN--------------TTTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQ 238 (487)
Q Consensus 173 ~~f~v~gD~~~~~~--------------~~~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~ 238 (487)
|||++++|+|.... ..++++.+++.+||+||++||+++. +.. ..+
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~------~~~---------------~~~ 59 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDG------DNA---------------RAE 59 (267)
T ss_pred CeEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecC------CCc---------------hHH
Confidence 69999999995532 1234566666789999999999953 110 012
Q ss_pred HHHHHHHHhhhccccCCCEEEecCCcccccCccchhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCccc----
Q 039280 239 PRWDYWGRYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYID---- 314 (487)
Q Consensus 239 ~~w~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~---- 314 (487)
..|+.+.+.++.+ .+|+++++||||...... .+.. +... ...+..||+|++++++||+||+...
T Consensus 60 ~~~~~~~~~l~~l--~~p~~~v~GNHD~~~~~~-----~~~~-~~~~----~~~~~~yysf~~~~~~~i~lds~~~~~~~ 127 (267)
T cd07396 60 EALDAVLAILDRL--KGPVHHVLGNHDLYNPSR-----EYLL-LYTL----LGLGAPYYSFSPGGIRFIVLDGYDISALG 127 (267)
T ss_pred HHHHHHHHHHHhc--CCCEEEecCccccccccH-----hhhh-cccc----cCCCCceEEEecCCcEEEEEeCCcccccc
Confidence 4556666666554 589999999999863321 1111 0001 1234569999999999999998531
Q ss_pred ------------------------------CCCChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHH
Q 039280 315 ------------------------------YDKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRV 364 (487)
Q Consensus 315 ------------------------------~~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~ 364 (487)
.....+|++||+++|+++..+. .++||++|+|++...... ......++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~~~-~~viV~~Hhp~~~~~~~~-~~~~~~~~ 205 (267)
T cd07396 128 RPEDTPKAENADDNSNLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADANG-EKVIIFSHFPLHPESTSP-HGLLWNHE 205 (267)
T ss_pred CCCCChhhhhHHHhchhhhhccCccceeccCcCCHHHHHHHHHHHHHHHhcC-CeEEEEEeccCCCCCCCc-cccccCHH
Confidence 1235899999999999864332 358999999987643211 11111257
Q ss_pred HHHHHHHHc-CCcEEEeCccccceecccccCCccCCCCcEEEEeCCcccc
Q 039280 365 EMEDLLYYY-GVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDGGNV 413 (487)
Q Consensus 365 ~l~~l~~~~-~VdlvlsGH~H~yeR~~p~~~~~~~~~g~vyIv~G~gG~~ 413 (487)
.+.++++++ +|+++|+||+|.++... .+|+.|+++|+-...
T Consensus 206 ~~~~ll~~~~~V~~v~~GH~H~~~~~~--------~~gi~~~~~~a~~~~ 247 (267)
T cd07396 206 EVLSILRAYGCVKACISGHDHEGGYAQ--------RHGIHFLTLEGMVET 247 (267)
T ss_pred HHHHHHHhCCCEEEEEcCCcCCCCccc--------cCCeeEEEechhhcC
Confidence 788999996 79999999999997542 478999999887664
|
Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.1e-22 Score=200.38 Aligned_cols=313 Identities=21% Similarity=0.269 Sum_probs=206.2
Q ss_pred CceEEEeeccCC-CcEEEEEEcCCCCCCCCCCCCCCC-CCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 50 PEQIFVSLSARY-DSVWISWITGEFQIGDNISPLDPE-LVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 50 P~qi~l~~~~~~-~~~~V~W~T~~~~~~~~~~~~~~~-~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
|.--|=..++|| ..-.|-|.--++. |+... ...-.+|++++++--+.+..++..+ .....+
T Consensus 37 paF~~GVaSGDp~~~svviWTRl~P~------p~~~g~~v~V~wEvs~~~~f~~ivr~gt~~a-----------~p~~dh 99 (522)
T COG3540 37 PAFTHGVASGDPTATSVVIWTRLDPE------PLNGGRPVPVIWEVSTDENFSNIVRKGTVIA-----------SPELDH 99 (522)
T ss_pred CccccccccCCCCCCeEEEEEccCCc------cccCCCCcceEEEecCCccHHHHHhcCCccC-----------CcccCc
Confidence 433344445788 4577888776642 11111 1234567777765333332232210 112458
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCcCceEEEEcCCCCCCCCCCcEEEEEecC---CCCCChHHHHHHHHHcCCCEEEE
Q 039280 128 IHHVLITGLQPNTLYEYECGDPSISAMSSSHYFRTMPVSGPSDYPNRIAVVGDL---GLTYNTTTTVAHLMSNHPDLLLL 204 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~~~~~s~~~~F~T~p~~~~~~~~~~f~v~gD~---~~~~~~~~~l~~l~~~~pdfvl~ 204 (487)
.+++.++||+|++.|+||+..+. ..|.+.+|||+|..+. .++|+.+||. |...+...+.+.|.+.+|||+||
T Consensus 100 tv~v~~~gL~P~~~yfYRf~~~~--~~spvGrtrTapa~~~---~i~~~~fa~ascQ~~~~gy~~aY~~ma~~~~D~viH 174 (522)
T COG3540 100 TVHVDLRGLSPDQDYFYRFKAGD--ERSPVGRTRTAPAPGR---AIRFVWFADASCQGWEIGYMTAYKTMAKEEPDFVIH 174 (522)
T ss_pred eEEEeccCCCCCceEEEEEeeCC--ccccccccccCCCCCC---cchhhhhhhccccccccchhHHHHHHHhcCCCEEEE
Confidence 89999999999999999998775 7789999999999865 3555555555 44445667888899999999999
Q ss_pred cCccccccccccCCCccccccc----cCC--CCcccchhhHHHHHHH--HhhhccccCCCEEEecCCcccccCccc----
Q 039280 205 IGDLSYADLYLTNGTKSSCYLC----QSI--ESPIQETYQPRWDYWG--RYMQPLVSNVPTMVIEGEHEIERQAEN---- 272 (487)
Q Consensus 205 ~GDl~y~d~~~~~g~~~~~~~~----~~~--~~~~~~~y~~~w~~~~--~~~~~l~~~~P~~~v~GNHD~~~~~~~---- 272 (487)
+||.+|+++...........+. ..+ .....+.|+.+|..++ ..++...+..|+++.+.+||+.+++..
T Consensus 175 ~GDyIYeyg~~~~~~~~~~~~~~~~~~~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~WDDHEv~NN~~~~~~~ 254 (522)
T COG3540 175 LGDYIYEYGPIPDEVSLNSWKNVVVTQHKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQWDDHEVANNWSNSIDE 254 (522)
T ss_pred cCCeeeccCCcccccccccccccccCCCCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEEeccccccccccccccc
Confidence 9999998754211000000000 000 1234567888887654 347777889999999999999876421
Q ss_pred -------h--------hhHHhhcccCCCCCCCC--CCCcceEEEEeCC-EEEEEEcCcccC------C------------
Q 039280 273 -------Q--------TFAAYSSRFAFPSEESG--SSSSLYYSFNAGG-IHFVMLSAYIDY------D------------ 316 (487)
Q Consensus 273 -------~--------~~~~y~~~f~~P~~~~~--~~~~~yYsf~~g~-v~fi~Ldt~~~~------~------------ 316 (487)
+ .+++|.+ .||..... .....|.+|.+|+ +.|.+||+..+. +
T Consensus 255 nD~~~~~k~~~~r~a~A~qAyyE--~mPiR~~~~p~~~~lYR~~tyG~La~~~~LDtR~YR~dqp~~dg~~~~~q~~~~~ 332 (522)
T COG3540 255 NDSRYDEKDFVLRAAAARQAYYE--HMPIRYSSLPTDGRLYRSFTYGPLADLFVLDTRSYRTDQPCGDGNPPNCQAVAGS 332 (522)
T ss_pred cCCCCChHHHHHHHHHHHHHHHH--hCccccccCCccceeeeeeccccccceeeeehhhhccccccCCCCcchhhhhhCc
Confidence 1 1223333 35544322 2357899999998 678999986543 1
Q ss_pred ----CChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccC---C----------CCcchhHHHHHHHHHHHHHcCCc--E
Q 039280 317 ----KSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTY---S----------AHYREVECMRVEMEDLLYYYGVD--I 377 (487)
Q Consensus 317 ----~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~---~----------~~~~~~~~~r~~l~~l~~~~~Vd--l 377 (487)
.+..|.+||+..|.+ +++.|+|+..-.|+--.. . +.+.....-|+.|..+++..++. +
T Consensus 333 ~~~mlG~~QeqWLk~~L~~---SkatWnVia~q~~~~~~~~d~~~a~~~~~a~~D~wdGy~~~RerLl~fi~~~~~~N~V 409 (522)
T COG3540 333 AATMLGEQQEQWLKRGLGA---SKATWNVIAQQMPLGLVVFDGSPATEGQEANADGWDGYPAGRERLLRFIADRKIRNTV 409 (522)
T ss_pred cccchhhHHHHHHHhhhhh---cchhhhhhhhhcceeEeecCCCccccCccccccCcCCCcccHHHHHHHHHhcCCCCcE
Confidence 278999999999998 678899999988863211 1 11122334588999999999875 8
Q ss_pred EEeCccccceec
Q 039280 378 VFNGHVHAYERS 389 (487)
Q Consensus 378 vlsGH~H~yeR~ 389 (487)
+|+|.+|...-.
T Consensus 410 ~LtgDvH~~wA~ 421 (522)
T COG3540 410 VLTGDVHYSWAH 421 (522)
T ss_pred EEechhHHHHHh
Confidence 899999975443
|
|
| >KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2e-22 Score=188.01 Aligned_cols=203 Identities=21% Similarity=0.315 Sum_probs=134.8
Q ss_pred CCcEEEEEecCCCCCChH--HHH---HHHH-HcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHH-HH
Q 039280 171 YPNRIAVVGDLGLTYNTT--TTV---AHLM-SNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRW-DY 243 (487)
Q Consensus 171 ~~~~f~v~gD~~~~~~~~--~~l---~~l~-~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w-~~ 243 (487)
.+++|+++||+|...... .+. .+|. +.+.||||.+||.+|.+|..+.. .+++ +.
T Consensus 42 gslsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~-------------------Dp~Fq~s 102 (336)
T KOG2679|consen 42 GSLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSEN-------------------DPRFQDS 102 (336)
T ss_pred CceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCC-------------------ChhHHhh
Confidence 379999999999654322 222 2232 35899999999999987653221 1222 22
Q ss_pred HHHhhhccccCCCEEEecCCcccccCccch---hhHHhhcccCCCCCCCCCCCcceE--E--EE--eCCEEEEEEcCccc
Q 039280 244 WGRYMQPLVSNVPTMVIEGEHEIERQAENQ---TFAAYSSRFAFPSEESGSSSSLYY--S--FN--AGGIHFVMLSAYID 314 (487)
Q Consensus 244 ~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~---~~~~y~~~f~~P~~~~~~~~~~yY--s--f~--~g~v~fi~Ldt~~~ 314 (487)
|.+....-....||+.+.||||+.++...+ .+.....||..|.. || + .+ .-++.++++|+...
T Consensus 103 F~nIYT~pSLQkpWy~vlGNHDyrGnV~AQls~~l~~~d~RW~c~rs--------f~~~ae~ve~f~v~~~~f~~d~~~~ 174 (336)
T KOG2679|consen 103 FENIYTAPSLQKPWYSVLGNHDYRGNVEAQLSPVLRKIDKRWICPRS--------FYVDAEIVEMFFVDTTPFMDDTFTL 174 (336)
T ss_pred hhhcccCcccccchhhhccCccccCchhhhhhHHHHhhccceecccH--------Hhhcceeeeeeccccccchhhheec
Confidence 334333223356999999999998764432 23444556655431 22 1 11 11234444444221
Q ss_pred -------CC-------CChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEe
Q 039280 315 -------YD-------KSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFN 380 (487)
Q Consensus 315 -------~~-------~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~Vdlvls 380 (487)
+. ....++.||+..|++ +.++|+||++|+|+.+.. +.+...|+++.|.|||+.++||++++
T Consensus 175 ~~~~~ydw~~v~PR~~~~~~~l~~le~~L~~---S~a~wkiVvGHh~i~S~~--~HG~T~eL~~~LlPiL~~n~VdlY~n 249 (336)
T KOG2679|consen 175 CTDDVYDWRGVLPRVKYLRALLSWLEVALKA---SRAKWKIVVGHHPIKSAG--HHGPTKELEKQLLPILEANGVDLYIN 249 (336)
T ss_pred ccccccccccCChHHHHHHHHHHHHHHHHHH---hhcceEEEecccceehhh--ccCChHHHHHHHHHHHHhcCCcEEEe
Confidence 11 136788999999999 678899999999998753 44567899999999999999999999
Q ss_pred CccccceecccccCCccC-CCCcEEEEeCCccc
Q 039280 381 GHVHAYERSNRVYNYSLD-PCGPVYILVGDGGN 412 (487)
Q Consensus 381 GH~H~yeR~~p~~~~~~~-~~g~vyIv~G~gG~ 412 (487)
||+|+.|..- + ..++-|+++|+|..
T Consensus 250 GHDHcLQhis-------~~e~~iqf~tSGagSk 275 (336)
T KOG2679|consen 250 GHDHCLQHIS-------SPESGIQFVTSGAGSK 275 (336)
T ss_pred cchhhhhhcc-------CCCCCeeEEeeCCccc
Confidence 9999999873 3 34666777777654
|
|
| >cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.2e-21 Score=187.27 Aligned_cols=192 Identities=19% Similarity=0.233 Sum_probs=125.9
Q ss_pred EEEEecCCCCCCh--------HHHHHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHH
Q 039280 175 IAVVGDLGLTYNT--------TTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGR 246 (487)
Q Consensus 175 f~v~gD~~~~~~~--------~~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~ 246 (487)
|++++|+|.+... ...++.+.+.+||+|+++||++.. ....+. -...++.+|+.|.+
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~--~~~~~~-------------~~~~~~~~~~~~~~ 66 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDN--KTGNKL-------------PSYQYQEEWQKYYN 66 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccc--cccCCC-------------cccccHHHHHHHHH
Confidence 7899999987541 113455666799999999999942 111111 01123567888888
Q ss_pred hhhccc--cCCCEEEecCCcccccCccchhhHHhhcccC-CCCCCCCCCCcceEE--EEeCCEEEEEEcCccc-------
Q 039280 247 YMQPLV--SNVPTMVIEGEHEIERQAENQTFAAYSSRFA-FPSEESGSSSSLYYS--FNAGGIHFVMLSAYID------- 314 (487)
Q Consensus 247 ~~~~l~--~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~-~P~~~~~~~~~~yYs--f~~g~v~fi~Ldt~~~------- 314 (487)
.+.... ...|++.++||||+.+.........|..+|. ... ....+|. ++.|+++||+|||...
T Consensus 67 ~~~~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~y~~~~~-----~~~~~~~~~~~~~~~~~I~Ldt~~~~~~~~~~ 141 (256)
T cd07401 67 ILKESSVINKEKWFDIRGNHDLFNIPSLDSENNYYRKYSATGR-----DGSFSFSHTTRFGNYSFIGVDPTLFPGPKRPF 141 (256)
T ss_pred HHHHhCCCCcceEEEeCCCCCcCCCCCccchhhHHHHhheecC-----CCccceEEEecCCCEEEEEEcCccCCCCCCCC
Confidence 765542 3689999999999964332222222222221 111 1122333 3459999999999642
Q ss_pred ---CCCChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceeccc
Q 039280 315 ---YDKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNR 391 (487)
Q Consensus 315 ---~~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~p 391 (487)
.....+|++||+++|++.. +.+++||++|+|++...... . ...+ .+.++|++++|+++||||.|.+++..|
T Consensus 142 ~~~g~l~~~ql~wL~~~L~~~~--~~~~~IV~~HhP~~~~~~~~-~--~~~~-~~~~ll~~~~v~~vl~GH~H~~~~~~p 215 (256)
T cd07401 142 NFFGSLDKKLLDRLEKELEKST--NSNYTIWFGHYPTSTIISPS-A--KSSS-KFKDLLKKYNVTAYLCGHLHPLGGLEP 215 (256)
T ss_pred ceeccCCHHHHHHHHHHHHhcc--cCCeEEEEEcccchhccCCC-c--chhH-HHHHHHHhcCCcEEEeCCccCCCccee
Confidence 2246899999999999753 34579999999986532211 1 1122 389999999999999999999999666
Q ss_pred c
Q 039280 392 V 392 (487)
Q Consensus 392 ~ 392 (487)
+
T Consensus 216 ~ 216 (256)
T cd07401 216 V 216 (256)
T ss_pred e
Confidence 5
|
TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.6e-20 Score=183.83 Aligned_cols=191 Identities=18% Similarity=0.217 Sum_probs=122.0
Q ss_pred CcEEEEEecCCCCC---------C----hHHHHHHHHHc--CCCEEEEcCccccccccccCCCccccccccCCCCcccch
Q 039280 172 PNRIAVVGDLGLTY---------N----TTTTVAHLMSN--HPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQET 236 (487)
Q Consensus 172 ~~~f~v~gD~~~~~---------~----~~~~l~~l~~~--~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~ 236 (487)
++||++++|+|... + ..++++++.+. +|||||++||++.. +.
T Consensus 14 ~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~------~~----------------- 70 (275)
T PRK11148 14 RVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQD------HS----------------- 70 (275)
T ss_pred CEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCC------CC-----------------
Confidence 79999999999632 1 12345555543 69999999999952 21
Q ss_pred hhHHHHHHHHhhhccccCCCEEEecCCcccccCccchhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCcccC-
Q 039280 237 YQPRWDYWGRYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYIDY- 315 (487)
Q Consensus 237 y~~~w~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~~- 315 (487)
...+..+.+.++.+ .+|+++++||||... .+..+.....+ ...++.+..++++||+||+....
T Consensus 71 -~~~~~~~~~~l~~l--~~Pv~~v~GNHD~~~-----~~~~~~~~~~~--------~~~~~~~~~~~~~~i~Lds~~~g~ 134 (275)
T PRK11148 71 -SEAYQHFAEGIAPL--RKPCVWLPGNHDFQP-----AMYSALQDAGI--------SPAKHVLIGEHWQILLLDSQVFGV 134 (275)
T ss_pred -HHHHHHHHHHHhhc--CCcEEEeCCCCCChH-----HHHHHHhhcCC--------CccceEEecCCEEEEEecCCCCCC
Confidence 13345566666665 689999999999842 12222211111 11233344557999999996421
Q ss_pred ---CCChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcc-hhHHHHHHHHHHHHHc-CCcEEEeCccccceecc
Q 039280 316 ---DKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYR-EVECMRVEMEDLLYYY-GVDIVFNGHVHAYERSN 390 (487)
Q Consensus 316 ---~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~-~~~~~r~~l~~l~~~~-~VdlvlsGH~H~yeR~~ 390 (487)
..+.+|++||+++|++... . .+||++|||+......+.. ......+.|.+++++| +|+++|+||+|.....
T Consensus 135 ~~G~l~~~ql~wL~~~L~~~~~--~-~~vv~~hH~P~~~~~~~~d~~~l~n~~~l~~ll~~~~~v~~vl~GH~H~~~~~- 210 (275)
T PRK11148 135 PHGELSEYQLEWLERKLADAPE--R-HTLVLLHHHPLPAGCAWLDQHSLRNAHELAEVLAKFPNVKAILCGHIHQELDL- 210 (275)
T ss_pred cCCEeCHHHHHHHHHHHhhCCC--C-CeEEEEcCCCCCCCcchhhccCCCCHHHHHHHHhcCCCceEEEecccChHHhc-
Confidence 2468999999999998632 2 2455555543332221111 0111246899999998 8999999999986443
Q ss_pred cccCCccCCCCcEEEEeCCccc
Q 039280 391 RVYNYSLDPCGPVYILVGDGGN 412 (487)
Q Consensus 391 p~~~~~~~~~g~vyIv~G~gG~ 412 (487)
...|+.++++++.+.
T Consensus 211 -------~~~gi~~~~~ps~~~ 225 (275)
T PRK11148 211 -------DWNGRRLLATPSTCV 225 (275)
T ss_pred -------eECCEEEEEcCCCcC
Confidence 246788888777665
|
|
| >cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.1e-19 Score=172.51 Aligned_cols=149 Identities=19% Similarity=0.222 Sum_probs=107.2
Q ss_pred cEEEEEecCCCCCC-h----HHH----HHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHH
Q 039280 173 NRIAVVGDLGLTYN-T----TTT----VAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDY 243 (487)
Q Consensus 173 ~~f~v~gD~~~~~~-~----~~~----l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~ 243 (487)
|||++++|+|.... . .+. ++.+.+.+||+|+++||+++.. . ...+|+.
T Consensus 1 f~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~------~-----------------~~~~~~~ 57 (214)
T cd07399 1 FTLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDG------D-----------------NDAEWEA 57 (214)
T ss_pred CEEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCC------C-----------------CHHHHHH
Confidence 68999999997543 1 122 3334456899999999999531 1 0246788
Q ss_pred HHHhhhccc-cCCCEEEecCCcccccCccchhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCcccCCCChHHH
Q 039280 244 WGRYMQPLV-SNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYIDYDKSSDQY 322 (487)
Q Consensus 244 ~~~~~~~l~-~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~~~~~~~Q~ 322 (487)
+.+.++.+. ..+|+++++||||. ++.+|+. ...+|+
T Consensus 58 ~~~~~~~l~~~~~p~~~~~GNHD~---------------------------------------~~~ld~~----~~~~ql 94 (214)
T cd07399 58 ADKAFARLDKAGIPYSVLAGNHDL---------------------------------------VLALEFG----PRDEVL 94 (214)
T ss_pred HHHHHHHHHHcCCcEEEECCCCcc---------------------------------------hhhCCCC----CCHHHH
Confidence 888888875 67999999999992 2333332 358999
Q ss_pred HHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcch-----hHHHHHHHHHHHHHc-CCcEEEeCccccceecc
Q 039280 323 KWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYRE-----VECMRVEMEDLLYYY-GVDIVFNGHVHAYERSN 390 (487)
Q Consensus 323 ~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~-----~~~~r~~l~~l~~~~-~VdlvlsGH~H~yeR~~ 390 (487)
+||+++|++.. ..++||++|+|++......... ....++.|++|++++ +|+++|+||.|.+.+..
T Consensus 95 ~WL~~~L~~~~---~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~ 165 (214)
T cd07399 95 QWANEVLKKHP---DRPAILTTHAYLNCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRTT 165 (214)
T ss_pred HHHHHHHHHCC---CCCEEEEecccccCCCCcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCCceEE
Confidence 99999999853 2358999999988654321111 123356788999999 79999999999998774
|
YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for |
| >cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.3e-18 Score=173.64 Aligned_cols=192 Identities=20% Similarity=0.285 Sum_probs=127.0
Q ss_pred EEecCCCCCC---hHHHHHHHHHc--CCCEEEEcCccccccccccCCCccccccccCCCCcccchhhH--HHHHHHHhhh
Q 039280 177 VVGDLGLTYN---TTTTVAHLMSN--HPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQP--RWDYWGRYMQ 249 (487)
Q Consensus 177 v~gD~~~~~~---~~~~l~~l~~~--~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~--~w~~~~~~~~ 249 (487)
.+|+.+.... ..++++.+.+. +|||||++||++..+.+.. ..+ ... .+..+.+.++
T Consensus 42 ~~G~~~CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~----------------~~~-~~~~~~~~~~~~~l~ 104 (296)
T cd00842 42 PWGDYGCDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQ----------------TPE-TLVLISISNLTSLLK 104 (296)
T ss_pred CCcCcCCCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhh----------------chh-HHHHHHHHHHHHHHH
Confidence 3677664433 24566777776 8999999999997542210 000 011 2455666677
Q ss_pred ccccCCCEEEecCCcccccCcc-------chhhHHhhcccC--CCCCCC-CCCCcceEEEE-eCCEEEEEEcCcccC---
Q 039280 250 PLVSNVPTMVIEGEHEIERQAE-------NQTFAAYSSRFA--FPSEES-GSSSSLYYSFN-AGGIHFVMLSAYIDY--- 315 (487)
Q Consensus 250 ~l~~~~P~~~v~GNHD~~~~~~-------~~~~~~y~~~f~--~P~~~~-~~~~~~yYsf~-~g~v~fi~Ldt~~~~--- 315 (487)
.....+|+++++||||...... ...+..+...|. ++.... ....+.||++. .++++||+|||....
T Consensus 105 ~~~~~~pv~~~~GNHD~~p~~~~~~~~~~~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~ 184 (296)
T cd00842 105 KAFPDTPVYPALGNHDSYPVNQFPPNNSPSWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKN 184 (296)
T ss_pred HhCCCCCEEEcCCCCCCCcccccCCcccccHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccC
Confidence 7778899999999999975421 112222323231 232111 11246789998 889999999996432
Q ss_pred --------CCChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcC--CcEEEeCcccc
Q 039280 316 --------DKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYG--VDIVFNGHVHA 385 (487)
Q Consensus 316 --------~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~--VdlvlsGH~H~ 385 (487)
....+|++||+++|+++++... .++|++|+|+....... .....+.|.+|+++|. |.++|+||+|.
T Consensus 185 ~~~~~~~~~~~~~Ql~WL~~~L~~a~~~~~-~v~I~~HiPp~~~~~~~---~~~~~~~~~~ii~~y~~~i~~~~~GH~H~ 260 (296)
T cd00842 185 FWLLGSNETDPAGQLQWLEDELQEAEQAGE-KVWIIGHIPPGVNSYDT---LENWSERYLQIINRYSDTIAGQFFGHTHR 260 (296)
T ss_pred hhhhccCCCCHHHHHHHHHHHHHHHHHCCC-eEEEEeccCCCCccccc---chHHHHHHHHHHHHHHHhhheeeeccccc
Confidence 1247899999999998754333 47889999987643221 1345788999999997 77899999999
Q ss_pred ceec
Q 039280 386 YERS 389 (487)
Q Consensus 386 yeR~ 389 (487)
.+..
T Consensus 261 d~~~ 264 (296)
T cd00842 261 DEFR 264 (296)
T ss_pred ceEE
Confidence 8766
|
Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but |
| >PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 | Back alignment and domain information |
|---|
Probab=99.72 E-value=8.8e-18 Score=150.93 Aligned_cols=188 Identities=23% Similarity=0.247 Sum_probs=99.6
Q ss_pred cEEEEEecCCCCCChH-----HHHHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHH-H
Q 039280 173 NRIAVVGDLGLTYNTT-----TTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWG-R 246 (487)
Q Consensus 173 ~~f~v~gD~~~~~~~~-----~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~-~ 246 (487)
|||+++||+|...... .......+.++|+||++||+++.... ...+.... .
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~-----------------------~~~~~~~~~~ 57 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNP-----------------------SEEWRAQFWF 57 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSH-----------------------HHHHHHHHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccc-----------------------cccchhhhcc
Confidence 6999999999875433 22333445799999999999974210 11111111 1
Q ss_pred hhhccccCCCEEEecCCcccccCccchhhHHhhcccC-CCCCCCCCCCcceEEEEeCCEEEEEEcCcccCCCCh---HHH
Q 039280 247 YMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFA-FPSEESGSSSSLYYSFNAGGIHFVMLSAYIDYDKSS---DQY 322 (487)
Q Consensus 247 ~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~-~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~~~~~~---~Q~ 322 (487)
........+|+++++||||.................. ..........+...........+............. .+.
T Consensus 58 ~~~~~~~~~~~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (200)
T PF00149_consen 58 FIRLLNPKIPVYFILGNHDYYSGNSFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWW 137 (200)
T ss_dssp HHHHHHTTTTEEEEE-TTSSHHHHHHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHH
T ss_pred chhhhhccccccccccccccceeccccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcc
Confidence 2233456899999999999974321111111111110 000000000000011222222222222221111122 333
Q ss_pred HHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcc--hhHHHHHHHHHHHHHcCCcEEEeCccccc
Q 039280 323 KWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYR--EVECMRVEMEDLLYYYGVDIVFNGHVHAY 386 (487)
Q Consensus 323 ~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~--~~~~~r~~l~~l~~~~~VdlvlsGH~H~y 386 (487)
.|+...++. ...+++||++|+|+++....... .....++.+..++++++|+++|+||+|.|
T Consensus 138 ~~~~~~~~~---~~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 138 LWLLLLLEA---KNDDPVIVFTHHPPYSSSSDSSSYGNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp HHHHHHHHE---EEESEEEEEESSSSSTTSSSTHHHSSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred ccccccccc---ccccceeEEEecCCCCccccccccchhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 333333333 34568999999999876543211 01235678899999999999999999986
|
The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C .... |
| >cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.5e-16 Score=153.24 Aligned_cols=174 Identities=19% Similarity=0.210 Sum_probs=112.8
Q ss_pred HHHHHHHHH-cCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhhhccccCCCEEEecCCccc
Q 039280 188 TTTVAHLMS-NHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEI 266 (487)
Q Consensus 188 ~~~l~~l~~-~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~~~l~~~~P~~~v~GNHD~ 266 (487)
.+.+..+.+ .+||+||++||++.. |... ..+.|...++.|.+.+.++...+|++.++||||+
T Consensus 34 r~~~~~~~~~l~PD~vv~lGDL~d~------G~~~-----------~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDi 96 (257)
T cd08163 34 RRNWRYMQKQLKPDSTIFLGDLFDG------GRDW-----------ADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDI 96 (257)
T ss_pred HHHHHHHHHhcCCCEEEEecccccC------CeeC-----------cHHHHHHHHHHHHHHhcCCCccceEEEeCCCccc
Confidence 344455544 589999999999852 3210 0112223344555555554446899999999998
Q ss_pred ccCccc--hhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCccc-----CCCChHHHHHHHHHhcccCCCCCCe
Q 039280 267 ERQAEN--QTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYID-----YDKSSDQYKWLESDLGDVDREVTPW 339 (487)
Q Consensus 267 ~~~~~~--~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~-----~~~~~~Q~~WL~~~L~~~~r~~~~w 339 (487)
...... .....|.+.|. ..+|+|++|+++||+||+... .....+|.+||++.|++... ..|
T Consensus 97 g~~~~~~~~~~~rf~~~Fg----------~~~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~~p- 164 (257)
T cd08163 97 GFGNGVVLPVRQRFEKYFG----------PTSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMKVK-SKP- 164 (257)
T ss_pred CCCCCCCHHHHHHHHHHhC----------CCceEEEECCEEEEEEccccccCCcccccchhHHHHHHhhhhccCC-CCc-
Confidence 543211 22345666663 235889999999999999632 12356899999999987532 233
Q ss_pred EEEEcCCCccccCCCCcc---hh------------H-HH-HHHHHHHHHHcCCcEEEeCccccceecc
Q 039280 340 LIAAWHPPWYSTYSAHYR---EV------------E-CM-RVEMEDLLYYYGVDIVFNGHVHAYERSN 390 (487)
Q Consensus 340 ~Iv~~H~P~y~~~~~~~~---~~------------~-~~-r~~l~~l~~~~~VdlvlsGH~H~yeR~~ 390 (487)
+||++|+|+|.......+ +. + .+ .+.-..||++.+..+||+||+|.|-...
T Consensus 165 ~ILl~H~Plyr~~~~~cg~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~~~ 232 (257)
T cd08163 165 RILLTHVPLYRPPNTSCGPLRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCEVV 232 (257)
T ss_pred EEEEeccccccCCCCCCCCccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCccceeE
Confidence 899999999864321111 00 0 11 2344578888899999999999998763
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site |
| >cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.2e-15 Score=146.90 Aligned_cols=190 Identities=17% Similarity=0.241 Sum_probs=117.2
Q ss_pred EEEecCCCCC--------C---hHHHHHHHHHc------CCCEEEEcCccccccccccCCCccccccccCCCCcccchhh
Q 039280 176 AVVGDLGLTY--------N---TTTTVAHLMSN------HPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQ 238 (487)
Q Consensus 176 ~v~gD~~~~~--------~---~~~~l~~l~~~------~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~ 238 (487)
.+++|+|... - ..+.++++.+. +||+||++||+++. +. .
T Consensus 2 ~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~------~~-----------------~- 57 (232)
T cd07393 2 FAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWA------MK-----------------L- 57 (232)
T ss_pred eEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccC------CC-----------------h-
Confidence 4789999763 1 13456666554 89999999999842 11 0
Q ss_pred HHHHHHHHhhhccccCCCEEEecCCcccccCccchhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCccc----
Q 039280 239 PRWDYWGRYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYID---- 314 (487)
Q Consensus 239 ~~w~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~---- 314 (487)
.......+.++.+ ..|+++++||||+.... ...+...+. ... ..-....++.++++.|+.++....
T Consensus 58 ~~~~~~l~~l~~l--~~~v~~V~GNHD~~~~~----~~~~~~~l~--~~~--~~~~~n~~~~~~~i~i~G~~~~~~~~~~ 127 (232)
T cd07393 58 EEAKLDLAWIDAL--PGTKVLLKGNHDYWWGS----ASKLRKALE--ESR--LALLFNNAYIDDDVAICGTRGWDNPGNP 127 (232)
T ss_pred HHHHHHHHHHHhC--CCCeEEEeCCccccCCC----HHHHHHHHH--hcC--eEEeccCcEEECCEEEEEEEeeCCCCCc
Confidence 1122223333333 34789999999984211 122222121 000 000013446678899998763211
Q ss_pred C-------------CCChHHHHHHHHHhcccCCCC-CCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEe
Q 039280 315 Y-------------DKSSDQYKWLESDLGDVDREV-TPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFN 380 (487)
Q Consensus 315 ~-------------~~~~~Q~~WL~~~L~~~~r~~-~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~Vdlvls 380 (487)
. .....|++||++.|+++.... ..++|+++|+|++..... .+.+..++++++++++|+
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~~~--------~~~~~~~~~~~~v~~vl~ 199 (232)
T cd07393 128 WPPINETLKVEEDEKIFERELERLELSLKAAKKREKEKIKIVMLHYPPANENGD--------DSPISKLIEEYGVDICVY 199 (232)
T ss_pred cccccccccchhHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCcCCCCC--------HHHHHHHHHHcCCCEEEE
Confidence 0 012568999999999864322 246899999998764321 235678889999999999
Q ss_pred CccccceecccccCCccCCCCcEEEEeCCc
Q 039280 381 GHVHAYERSNRVYNYSLDPCGPVYILVGDG 410 (487)
Q Consensus 381 GH~H~yeR~~p~~~~~~~~~g~vyIv~G~g 410 (487)
||+|.+++..|+.. .-+|+.|+++.++
T Consensus 200 GH~H~~~~~~~~~~---~~~gi~~~~~~~~ 226 (232)
T cd07393 200 GHLHGVGRDRAING---ERGGIRYQLVSAD 226 (232)
T ss_pred CCCCCCcccccccc---eECCEEEEEEcch
Confidence 99999999877632 2457777776654
|
DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat |
| >cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.3e-15 Score=141.46 Aligned_cols=150 Identities=20% Similarity=0.246 Sum_probs=95.2
Q ss_pred CcEEEEEecCCCCCCh------------HHHHHH-HHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhh
Q 039280 172 PNRIAVVGDLGLTYNT------------TTTVAH-LMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQ 238 (487)
Q Consensus 172 ~~~f~v~gD~~~~~~~------------~~~l~~-l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~ 238 (487)
.+||++++|+|..... .+.+.+ +.+.+||+||++||+++.... .....
T Consensus 2 ~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~-------------------~~~~~ 62 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENT-------------------NDNST 62 (199)
T ss_pred ceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCC-------------------chHHH
Confidence 4899999999986432 122333 334689999999999974211 00012
Q ss_pred HHHHHHHHhhhccc-cCCCEEEecCCcccccCccchhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCcccCCC
Q 039280 239 PRWDYWGRYMQPLV-SNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYIDYDK 317 (487)
Q Consensus 239 ~~w~~~~~~~~~l~-~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~~~~ 317 (487)
..|+ +.++.+. ..+|+++++||||. ....
T Consensus 63 ~~~~---~~~~~l~~~~~p~~~~~GNHD~-----------------------------------------------~g~l 92 (199)
T cd07383 63 SALD---KAVSPMIDRKIPWAATFGNHDG-----------------------------------------------YDWI 92 (199)
T ss_pred HHHH---HHHHHHHHcCCCEEEECccCCC-----------------------------------------------CCCC
Confidence 3344 4444442 47999999999991 1123
Q ss_pred ChHHHHHHHHHhcccC--CCCCCeEEEEcCCCccccCCCC---------cchh---HHHHHH-HHHHHHHcCCcEEEeCc
Q 039280 318 SSDQYKWLESDLGDVD--REVTPWLIAAWHPPWYSTYSAH---------YREV---ECMRVE-MEDLLYYYGVDIVFNGH 382 (487)
Q Consensus 318 ~~~Q~~WL~~~L~~~~--r~~~~w~Iv~~H~P~y~~~~~~---------~~~~---~~~r~~-l~~l~~~~~VdlvlsGH 382 (487)
...|++||+++|++.. +....+.++++|+|+......+ ..+. ....+. +..+.+..+|+++|+||
T Consensus 93 ~~~ql~wL~~~l~~~~~~~~~~~~~l~f~H~P~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v~~GH 172 (199)
T cd07383 93 RPSQIEWFKETSAALKKKYGKPIPSLAFFHIPLPEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGVFCGH 172 (199)
T ss_pred CHHHHHHHHHHHHHHhhccCCCCcceEEEecChHHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEEEeCC
Confidence 5799999999999863 2234569999999976532211 0010 011233 34445667899999999
Q ss_pred cccceecc
Q 039280 383 VHAYERSN 390 (487)
Q Consensus 383 ~H~yeR~~ 390 (487)
+|.++...
T Consensus 173 ~H~~~~~~ 180 (199)
T cd07383 173 DHGNDFCG 180 (199)
T ss_pred CCCcceec
Confidence 99987653
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP |
| >cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.64 E-value=6.6e-15 Score=136.35 Aligned_cols=167 Identities=16% Similarity=0.194 Sum_probs=101.9
Q ss_pred EEEEecCCCCCChHHHHHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhhhccccC
Q 039280 175 IAVVGDLGLTYNTTTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYMQPLVSN 254 (487)
Q Consensus 175 f~v~gD~~~~~~~~~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~~~l~~~ 254 (487)
|+++||+|........ ..+.+.++|+||++||++.. +.. .....+ +.++. ..
T Consensus 1 i~~~sD~H~~~~~~~~-~~~~~~~~D~vv~~GDl~~~------~~~------------------~~~~~~-~~l~~--~~ 52 (188)
T cd07392 1 ILAISDIHGDVEKLEA-IILKAEEADAVIVAGDITNF------GGK------------------EAAVEI-NLLLA--IG 52 (188)
T ss_pred CEEEEecCCCHHHHHH-HHhhccCCCEEEECCCccCc------CCH------------------HHHHHH-HHHHh--cC
Confidence 5789999986533222 34556789999999999952 210 111112 33333 36
Q ss_pred CCEEEecCCcccccCccchhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCccc------CCCChHHHHHHHHH
Q 039280 255 VPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYID------YDKSSDQYKWLESD 328 (487)
Q Consensus 255 ~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~------~~~~~~Q~~WL~~~ 328 (487)
+|+++++||||.... ........ . ...+ ..+.++++.|+.+++... .....+|++|+ +.
T Consensus 53 ~p~~~v~GNHD~~~~-----~~~~~~~~-~------~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~ 117 (188)
T cd07392 53 VPVLAVPGNCDTPEI-----LGLLTSAG-L------NLHG--KVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-GR 117 (188)
T ss_pred CCEEEEcCCCCCHHH-----HHhhhcCc-E------ecCC--CEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-hh
Confidence 899999999997411 11100000 0 0011 245678999999987421 12357899998 44
Q ss_pred hcccCCCCCCeEEEEcCCCccccC-CCCcchhHHHHHHHHHHHHHcCCcEEEeCccccce
Q 039280 329 LGDVDREVTPWLIAAWHPPWYSTY-SAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYE 387 (487)
Q Consensus 329 L~~~~r~~~~w~Iv~~H~P~y~~~-~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~ye 387 (487)
|+.. ..+.+|+++|+|++... ...........+.+.+++++++++++|+||+|.-.
T Consensus 118 l~~~---~~~~~ilv~H~pp~~~~~d~~~~~~~~g~~~l~~li~~~~~~~~l~GH~H~~~ 174 (188)
T cd07392 118 LNNL---LAKNLILVTHAPPYGTAVDRVSGGFHVGSKAIRKFIEERQPLLCICGHIHESR 174 (188)
T ss_pred hhcc---CCCCeEEEECCCCcCCcccccCCCCccCCHHHHHHHHHhCCcEEEEecccccc
Confidence 5442 22348999999987631 11111111224678899999999999999999864
|
PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina |
| >TIGR03729 acc_ester putative phosphoesterase | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.7e-15 Score=144.10 Aligned_cols=176 Identities=20% Similarity=0.251 Sum_probs=106.9
Q ss_pred EEEEEecCCCCCCh-------HHHHHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHH
Q 039280 174 RIAVVGDLGLTYNT-------TTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGR 246 (487)
Q Consensus 174 ~f~v~gD~~~~~~~-------~~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~ 246 (487)
||++++|+|..... ...++.+.+.++|+|+++||++.. . .+...+.+
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~--~------------------------~~~~~~~~ 54 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISND--F------------------------QRSLPFIE 54 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccc--h------------------------hhHHHHHH
Confidence 58999999965321 234555667789999999999942 0 01122333
Q ss_pred hhhccccCCCEEEecCCcccccCccchhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCcccCC----------
Q 039280 247 YMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYIDYD---------- 316 (487)
Q Consensus 247 ~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~~~---------- 316 (487)
.+..+ ..+|++.++||||+.... .+..+...+. + ....+.++.+..++++|++++...++.
T Consensus 55 ~l~~~-~~~pv~~v~GNHD~~~~~---~~~~~~~~~~-~----~~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~ 125 (239)
T TIGR03729 55 KLQEL-KGIKVTFNAGNHDMLKDL---TYEEIESNDS-P----LYLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEI 125 (239)
T ss_pred HHHHh-cCCcEEEECCCCCCCCCC---CHHHHHhccc-h----hhhcccccccCCCceEEEeeccceecccccccCHHHH
Confidence 33332 468999999999985221 1121222110 0 001122333444678888888432210
Q ss_pred ---------------------CChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCC------CCcchhHH--HHHHHH
Q 039280 317 ---------------------KSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYS------AHYREVEC--MRVEME 367 (487)
Q Consensus 317 ---------------------~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~------~~~~~~~~--~r~~l~ 367 (487)
...+|++||++.|++... .+ +||++|+|+..... ..+..... ..+.|.
T Consensus 126 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~--~~-~ivvtH~pP~~~~~~~~~~~~~~~~~~~~~~s~~l~ 202 (239)
T TIGR03729 126 LRWKKSFWFDRRIKRPMSDPERTAIVLKQLKKQLNQLDN--KQ-VIFVTHFVPHRDFIYVPMDHRRFDMFNAFLGSQHFG 202 (239)
T ss_pred HHhhhcEEeecccCCCCChHHHHHHHHHHHHHHHHhcCC--CC-EEEEEcccchHHHhcCCCCCcchhhhhhccChHHHH
Confidence 136789999999987632 22 88888998754211 11111111 137889
Q ss_pred HHHHHcCCcEEEeCccccce
Q 039280 368 DLLYYYGVDIVFNGHVHAYE 387 (487)
Q Consensus 368 ~l~~~~~VdlvlsGH~H~ye 387 (487)
+++++++|+++|+||+|.-.
T Consensus 203 ~li~~~~v~~~i~GH~H~~~ 222 (239)
T TIGR03729 203 QLLVKYEIKDVIFGHLHRRF 222 (239)
T ss_pred HHHHHhCCCEEEECCccCCC
Confidence 99999999999999999865
|
Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system. |
| >TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family | Back alignment and domain information |
|---|
Probab=99.63 E-value=8e-15 Score=150.42 Aligned_cols=94 Identities=22% Similarity=0.343 Sum_probs=71.8
Q ss_pred CcceEEEE-eCCEEEEEEcCcccC-----CCChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcc-----hhHH
Q 039280 293 SSLYYSFN-AGGIHFVMLSAYIDY-----DKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYR-----EVEC 361 (487)
Q Consensus 293 ~~~yYsf~-~g~v~fi~Ldt~~~~-----~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~-----~~~~ 361 (487)
+..||+|+ .++++||+|||.... ...++|++||+++|++. ..+++||++|||++........ ....
T Consensus 290 G~~YYSFd~~ggvrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~a---~~k~VVVf~HHPp~s~g~~~~Dp~~pg~~~~ 366 (496)
T TIGR03767 290 GTGYYTFDIAGGVRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRAS---SDTLFVLFSHHTSWSMVNELTDPVDPGEKRH 366 (496)
T ss_pred CCceEEEEeECCEEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhcC---CCCCEEEEECCCCcccccccccccccccccc
Confidence 56799999 899999999997431 24799999999999974 3356999999998764322110 1112
Q ss_pred HHHHHHHHHHHc-CCcEEEeCccccceec
Q 039280 362 MRVEMEDLLYYY-GVDIVFNGHVHAYERS 389 (487)
Q Consensus 362 ~r~~l~~l~~~~-~VdlvlsGH~H~yeR~ 389 (487)
..++|.++|++| +|.++|+||.|.....
T Consensus 367 n~~eLldLL~~ypnV~aVfsGHvH~n~i~ 395 (496)
T TIGR03767 367 LGTELVSLLLEHPNVLAWVNGHTHSNKIT 395 (496)
T ss_pred CHHHHHHHHhcCCCceEEEECCcCCCccc
Confidence 346899999999 7999999999987654
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202. |
| >COG1409 Icc Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.55 E-value=9.1e-14 Score=137.90 Aligned_cols=179 Identities=25% Similarity=0.338 Sum_probs=116.6
Q ss_pred cEEEEEecCCCC--CC-h----HHHHHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHH
Q 039280 173 NRIAVVGDLGLT--YN-T----TTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWG 245 (487)
Q Consensus 173 ~~f~v~gD~~~~--~~-~----~~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~ 245 (487)
+||+.++|.|.. .. . .++++++...+||+||++|||+.. |. ...++...
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~------~~------------------~~~~~~~~ 56 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTND------GE------------------PEEYRRLK 56 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCC------CC------------------HHHHHHHH
Confidence 589999999988 22 2 234566666789999999999963 22 12334455
Q ss_pred HhhhccccCCCEEEecCCcccccCccchhhHHhhcccCCCCCCCCCCCcceEEEEe-CCEEEEEEcCcccC----CCChH
Q 039280 246 RYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNA-GGIHFVMLSAYIDY----DKSSD 320 (487)
Q Consensus 246 ~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~-g~v~fi~Ldt~~~~----~~~~~ 320 (487)
+.++.+....|++++|||||..... ...+...+.... ..+..... ++++++.+|+.... .....
T Consensus 57 ~~l~~~~~~~~~~~vpGNHD~~~~~----~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~d~~~~~~~~G~~~~~ 125 (301)
T COG1409 57 ELLARLELPAPVIVVPGNHDARVVN----GEAFSDQFFNRY-------AVLVGACSSGGWRVIGLDSSVPGVPLGRLGAE 125 (301)
T ss_pred HHHhhccCCCceEeeCCCCcCCchH----HHHhhhhhcccC-------cceEeeccCCceEEEEecCCCCCCCCCEECHH
Confidence 5666555678999999999986432 122222221110 01111122 67899999997542 34789
Q ss_pred HHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcC--CcEEEeCccccc
Q 039280 321 QYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYG--VDIVFNGHVHAY 386 (487)
Q Consensus 321 Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~--VdlvlsGH~H~y 386 (487)
|++||++.|++........+|+++|+|+.................+..++..++ |+++|+||.|..
T Consensus 126 q~~~l~~~l~~~~~~~~~~~v~~~hh~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 126 QLDWLEEALAAAPERAKDTVVVLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred HHHHHHHHHHhCccccCceEEEecCCCCCCCCCccceeeeecchhHHHHHHhcCCceEEEEeCccccc
Confidence 999999999986433112467888888776443332222233456677888888 999999999977
|
|
| >cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.1e-13 Score=132.16 Aligned_cols=187 Identities=19% Similarity=0.158 Sum_probs=112.9
Q ss_pred CcEEEEEecCCCCCC-----hHHHHHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHH
Q 039280 172 PNRIAVVGDLGLTYN-----TTTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGR 246 (487)
Q Consensus 172 ~~~f~v~gD~~~~~~-----~~~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~ 246 (487)
++||++++|+|.... ..+.++.+.+.+||+|+++||+++.... .. +.+.+
T Consensus 1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~------------------------~~-~~~~~ 55 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVD------------------------VL-ELLLE 55 (223)
T ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcch------------------------hh-HHHHH
Confidence 479999999998753 2345566666799999999999963100 00 23455
Q ss_pred hhhccccCCCEEEecCCcccccCccchhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCcccCCCChHHHHHHH
Q 039280 247 YMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYIDYDKSSDQYKWLE 326 (487)
Q Consensus 247 ~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~ 326 (487)
.++.+....|+++++||||....... .+........+. ...+....++.++..+..+.... .....+++.
T Consensus 56 ~l~~l~~~~~v~~v~GNHD~~~~~~~-~~~~~l~~~~v~-----~L~~~~~~~~~~~~~i~i~G~~~----~~~~~~~~~ 125 (223)
T cd07385 56 LLKKLKAPLGVYAVLGNHDYYSGDEE-NWIEALESAGIT-----VLRNESVEISVGGATIGIAGVDD----GLGRRPDLE 125 (223)
T ss_pred HHhccCCCCCEEEECCCcccccCchH-HHHHHHHHcCCE-----EeecCcEEeccCCeEEEEEeccC----ccccCCCHH
Confidence 56666667999999999998643211 101111111111 11233455666665444432111 122335666
Q ss_pred HHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceecccccCCc----------
Q 039280 327 SDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYS---------- 396 (487)
Q Consensus 327 ~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~p~~~~~---------- 396 (487)
+.+++.+ .....|++.|.|.+.. .+.+.++|++|+||+|..|...|.....
T Consensus 126 ~~~~~~~--~~~~~I~l~H~P~~~~-----------------~~~~~~~dl~l~GHtHggqi~~~~~~~~~~~~~~~~~~ 186 (223)
T cd07385 126 KALKGLD--EDDPNILLAHQPDTAE-----------------EAAAWGVDLQLSGHTHGGQIRLPGIGPLVLSKLARPYD 186 (223)
T ss_pred HHHhCCC--CCCCEEEEecCCChhH-----------------HhcccCccEEEeccCCCCEEeccccccccchhhcCccc
Confidence 7776643 2346899999986421 1256799999999999999876654321
Q ss_pred ----cCCCCcEEEEeCCccc
Q 039280 397 ----LDPCGPVYILVGDGGN 412 (487)
Q Consensus 397 ----~~~~g~vyIv~G~gG~ 412 (487)
...+..+||..|.|..
T Consensus 187 ~G~~~~~~~~~~Vs~G~G~~ 206 (223)
T cd07385 187 YGLYRKGGSQLYVSRGLGTW 206 (223)
T ss_pred ceEEEECCEEEEEcCCccCC
Confidence 0134567777777654
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia |
| >cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.54 E-value=7.1e-14 Score=124.16 Aligned_cols=132 Identities=25% Similarity=0.362 Sum_probs=90.4
Q ss_pred EEEEecCCCCCChH-----------HHHHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHH
Q 039280 175 IAVVGDLGLTYNTT-----------TTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDY 243 (487)
Q Consensus 175 f~v~gD~~~~~~~~-----------~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~ 243 (487)
|++++|+|.+.... ..++.+.+.++|+|+++||+++. +. +.+|+.
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~------~~------------------~~~~~~ 56 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQR------GL------------------PEEFEE 56 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCC------CC------------------HHHHHH
Confidence 57899999875321 12344456789999999999963 11 234556
Q ss_pred HHHhhhccccC-CCEEEecCCcccccCccchhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCcccCCCChHHH
Q 039280 244 WGRYMQPLVSN-VPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYIDYDKSSDQY 322 (487)
Q Consensus 244 ~~~~~~~l~~~-~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~~~~~~~Q~ 322 (487)
+.+.++.+... +|++.++||||.
T Consensus 57 ~~~~~~~l~~~~~~~~~v~GNHD~-------------------------------------------------------- 80 (144)
T cd07400 57 AREFLDALPAPLEPVLVVPGNHDV-------------------------------------------------------- 80 (144)
T ss_pred HHHHHHHccccCCcEEEeCCCCeE--------------------------------------------------------
Confidence 66666666433 699999999996
Q ss_pred HHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceecccccCCccCCCCc
Q 039280 323 KWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGP 402 (487)
Q Consensus 323 ~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~p~~~~~~~~~g~ 402 (487)
|+++|+|++......... ...++.+.+++++++++++|+||+|...... +. ....++
T Consensus 81 ------------------iv~~Hhp~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~l~GH~H~~~~~~-~~---~~~~~~ 137 (144)
T cd07400 81 ------------------IVVLHHPLVPPPGSGRER-LLDAGDALKLLAEAGVDLVLHGHKHVPYVGN-IS---NAGGGL 137 (144)
T ss_pred ------------------EEEecCCCCCCCcccccc-CCCHHHHHHHHHHcCCCEEEECCCCCcCeee-cc---CCCCCE
Confidence 888899987653321111 1145678899999999999999999876542 11 124567
Q ss_pred EEEEeCC
Q 039280 403 VYILVGD 409 (487)
Q Consensus 403 vyIv~G~ 409 (487)
++|.+|+
T Consensus 138 ~~~~aGs 144 (144)
T cd07400 138 VVIGAGT 144 (144)
T ss_pred EEEecCC
Confidence 7777764
|
YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv |
| >cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.50 E-value=7.3e-14 Score=127.27 Aligned_cols=145 Identities=19% Similarity=0.299 Sum_probs=87.6
Q ss_pred EEEEecCCCCCChHHH-H-HHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhhhccc
Q 039280 175 IAVVGDLGLTYNTTTT-V-AHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYMQPLV 252 (487)
Q Consensus 175 f~v~gD~~~~~~~~~~-l-~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~~~l~ 252 (487)
|+++||+|........ + +.+.+.++|+++++||+++.. . ...+.. ......
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~------~------------------~~~~~~---~~~~~~ 53 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLT------D------------------APRFAP---LLLALK 53 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCc------c------------------hHHHHH---HHHhhc
Confidence 5789999987543322 1 223456899999999999531 1 011111 222334
Q ss_pred cCCCEEEecCCcccccCccchhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCcccCCC-ChHHHHHHHHHhcc
Q 039280 253 SNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYIDYDK-SSDQYKWLESDLGD 331 (487)
Q Consensus 253 ~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~~~~-~~~Q~~WL~~~L~~ 331 (487)
...|+++++||||+. +.|+...-..++.. ..++.+|+.++++
T Consensus 54 ~~~~v~~v~GNHD~~------------------------------------~~~~G~~~w~~~~~~~~~~~~~~~~d~~- 96 (166)
T cd07404 54 GFEPVIYVPGNHEFY------------------------------------VRIIGTTLWSDISLFGEAAARMRMNDFR- 96 (166)
T ss_pred CCccEEEeCCCcceE------------------------------------EEEEeeecccccCccchHHHHhCCCCCC-
Confidence 578999999999984 12222211111111 2345566655555
Q ss_pred cCCCCCCeEEEEcCCCccccCCCCc---c-hhHHHHHHHHHHHHHcCCcEEEeCccccceec
Q 039280 332 VDREVTPWLIAAWHPPWYSTYSAHY---R-EVECMRVEMEDLLYYYGVDIVFNGHVHAYERS 389 (487)
Q Consensus 332 ~~r~~~~w~Iv~~H~P~y~~~~~~~---~-~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~ 389 (487)
+.+||++|+|+........ . .....++.+..++++++|+++++||+|.....
T Consensus 97 ------~~~vv~~HhpP~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~~~~ 152 (166)
T cd07404 97 ------GKTVVVTHHAPSPLSLAPQYGDSLVNAAFAVDLDDLILADPIDLWIHGHTHFNFDY 152 (166)
T ss_pred ------CCEEEEeCCCCCccccCccccCCCcchhhhhccHhHHhhcCCCEEEECCccccceE
Confidence 2379999999876532211 1 11234566778889999999999999977433
|
MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t |
| >cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.8e-12 Score=123.19 Aligned_cols=173 Identities=14% Similarity=0.155 Sum_probs=101.9
Q ss_pred CcEEEEEecCCCCCCh-HHHHHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhhhc
Q 039280 172 PNRIAVVGDLGLTYNT-TTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYMQP 250 (487)
Q Consensus 172 ~~~f~v~gD~~~~~~~-~~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~~~ 250 (487)
+.|+++++|+|..... .+.++.+.+.++|+|+++||+++. +.. ......+.+.+..
T Consensus 4 ~~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~------g~~-----------------~~~~~~~l~~l~~ 60 (224)
T cd07388 4 VRYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPK------AAK-----------------SEDYAAFFRILGE 60 (224)
T ss_pred eeEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCC------CCC-----------------HHHHHHHHHHHHh
Confidence 5799999999975332 233444445689999999999953 100 0122233333333
Q ss_pred cccCCCEEEecCCcccccCccchhhH-HhhcccCCCCCCCCCCCcceEEEEe-CCEEEEEEcCcccC--CCChHHH----
Q 039280 251 LVSNVPTMVIEGEHEIERQAENQTFA-AYSSRFAFPSEESGSSSSLYYSFNA-GGIHFVMLSAYIDY--DKSSDQY---- 322 (487)
Q Consensus 251 l~~~~P~~~v~GNHD~~~~~~~~~~~-~y~~~f~~P~~~~~~~~~~yYsf~~-g~v~fi~Ldt~~~~--~~~~~Q~---- 322 (487)
+ .+|+++++||||... ...+. .|...-.+|..- ..... ...+ |++.|+.|+....+ ...++|.
T Consensus 61 l--~~pv~~V~GNhD~~v---~~~l~~~~~~~~~~p~~~--~lh~~--~~~~~g~~~~~GlGGs~~~~~e~sE~e~~~~~ 131 (224)
T cd07388 61 A--HLPTFYVPGPQDAPL---WEYLREAYNAELVHPEIR--NVHET--FAFWRGPYLVAGVGGEIADEGEPEEHEALRYP 131 (224)
T ss_pred c--CCceEEEcCCCChHH---HHHHHHHhcccccCccce--ecCCC--eEEecCCeEEEEecCCcCCCCCcCHHHHhhhh
Confidence 2 579999999999630 00011 111111112210 01111 2344 56999999865433 2345552
Q ss_pred HHHHH----HhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccc
Q 039280 323 KWLES----DLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVH 384 (487)
Q Consensus 323 ~WL~~----~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H 384 (487)
+||.+ .|.+. ..+..|+++|+|++.....+- -.+.+..++++++..+++|||.|
T Consensus 132 ~~~~~~~l~~~~~~---~~~~~VLv~H~PP~g~g~~h~-----GS~alr~~I~~~~P~l~i~GHih 189 (224)
T cd07388 132 AWVAEYRLKALWEL---KDYRKVFLFHTPPYHKGLNEQ-----GSHEVAHLIKTHNPLVVLVGGKG 189 (224)
T ss_pred hhHHHHHHHHHHhC---CCCCeEEEECCCCCCCCCCcc-----CHHHHHHHHHHhCCCEEEEcCCc
Confidence 56433 33332 233589999999998742232 23677789999999999999999
|
This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets, |
| >PRK11340 phosphodiesterase YaeI; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.7e-12 Score=127.81 Aligned_cols=164 Identities=17% Similarity=0.173 Sum_probs=96.8
Q ss_pred CcEEEEEecCCCCCC-----hHHHHHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHH
Q 039280 172 PNRIAVVGDLGLTYN-----TTTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGR 246 (487)
Q Consensus 172 ~~~f~v~gD~~~~~~-----~~~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~ 246 (487)
++||++++|+|.... ..+.++.+.+.+||+|+++||+++.+ . ...++.+.+
T Consensus 49 ~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~------~------------------~~~~~~~~~ 104 (271)
T PRK11340 49 PFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFD------M------------------PLNFSAFSD 104 (271)
T ss_pred CcEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCC------c------------------cccHHHHHH
Confidence 699999999998632 23345556677999999999998521 0 012344556
Q ss_pred hhhccccCCCEEEecCCcccccCcc-chhhHHhhcccCCCCCCCCCCCcceEEEEeCC--EEEEEEcCcccCCCChHHHH
Q 039280 247 YMQPLVSNVPTMVIEGEHEIERQAE-NQTFAAYSSRFAFPSEESGSSSSLYYSFNAGG--IHFVMLSAYIDYDKSSDQYK 323 (487)
Q Consensus 247 ~~~~l~~~~P~~~v~GNHD~~~~~~-~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~--v~fi~Ldt~~~~~~~~~Q~~ 323 (487)
.++.+.+..|+++++||||+..... ...+....+...+ .-..+....+..++ +.++.++-... +...
T Consensus 105 ~L~~L~~~~pv~~V~GNHD~~~~~~~~~~~~~~l~~~gi-----~lL~n~~~~i~~~~~~i~i~G~~d~~~---~~~~-- 174 (271)
T PRK11340 105 VLSPLAECAPTFACFGNHDRPVGTEKNHLIGETLKSAGI-----TVLFNQATVIATPNRQFELVGTGDLWA---GQCK-- 174 (271)
T ss_pred HHHHHhhcCCEEEecCCCCcccCccchHHHHHHHHhcCc-----EEeeCCeEEEeeCCcEEEEEEecchhc---cCCC--
Confidence 6666666689999999999853211 0112212111111 01223445555553 55666653211 1111
Q ss_pred HHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceecccc
Q 039280 324 WLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRV 392 (487)
Q Consensus 324 WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~p~ 392 (487)
..+.+++ +. ..|++.|.|-.. +.+.+.++||+||||+|.-|...|.
T Consensus 175 -~~~~~~~----~~-~~IlL~H~P~~~-----------------~~~~~~~~dL~lsGHTHGGQi~lP~ 220 (271)
T PRK11340 175 -PPPASEA----NL-PRLVLAHNPDSK-----------------EVMRDEPWDLMLCGHTHGGQLRVPL 220 (271)
T ss_pred -hhHhcCC----CC-CeEEEEcCCChh-----------------HhhccCCCCEEEeccccCCeEEccc
Confidence 1122222 22 489999999642 1234578999999999999987664
|
|
| >cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.1e-12 Score=124.98 Aligned_cols=185 Identities=16% Similarity=0.145 Sum_probs=102.8
Q ss_pred EEEEEecCCCCCCh----------------HHHHHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchh
Q 039280 174 RIAVVGDLGLTYNT----------------TTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETY 237 (487)
Q Consensus 174 ~f~v~gD~~~~~~~----------------~~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y 237 (487)
||++++|+|.+... .++++.+.+.+||+||++||++.... ..
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~----~~------------------ 58 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNN----PS------------------ 58 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCC----CC------------------
Confidence 68999999987431 22344445679999999999985310 00
Q ss_pred hHHHHHHHHhhhccc-cCCCEEEecCCcccccCccchhhHHhhcccCCCCC--CCCCCCcceEEEEeCCEEEEEEcCccc
Q 039280 238 QPRWDYWGRYMQPLV-SNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSE--ESGSSSSLYYSFNAGGIHFVMLSAYID 314 (487)
Q Consensus 238 ~~~w~~~~~~~~~l~-~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~--~~~~~~~~yYsf~~g~v~fi~Ldt~~~ 314 (487)
...+..+.+.++.+. ..+|+++++||||....... ............. ...........++..++.|+.++....
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~v~~~~GNHD~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~ 136 (223)
T cd00840 59 PEALELLIEALRRLKEAGIPVFIIAGNHDSPSRLGA--LSPLLALSGLHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLRR 136 (223)
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEecCCCCCcccccc--ccchHhhCcEEEEcccCcceeEEEeccCCeEEEEEECCCCCH
Confidence 123444555555553 57899999999998643211 1111000000000 000011122334455688888875422
Q ss_pred CCCChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceec
Q 039280 315 YDKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERS 389 (487)
Q Consensus 315 ~~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~ 389 (487)
. ....+.++++..+.+.. .....|++.|.|+.......... .......+...++|++++||.|..+..
T Consensus 137 ~-~~~~~~~~~~~~~~~~~--~~~~~Il~~H~~~~~~~~~~~~~----~~~~~~~~~~~~~d~v~~GH~H~~~~~ 204 (223)
T cd00840 137 S-RLRDLLADAELRPRPLD--PDDFNILLLHGGVAGAGPSDSER----APFVPEALLPAGFDYVALGHIHRPQII 204 (223)
T ss_pred H-HHHHHHHHHHHHhhccC--CCCcEEEEEeeeeecCCCCcccc----cccCcHhhcCcCCCEEECCCcccCeee
Confidence 1 12334445555555442 33458999999976543221100 122334556778999999999987653
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi |
| >TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family | Back alignment and domain information |
|---|
Probab=99.40 E-value=7.3e-12 Score=127.50 Aligned_cols=95 Identities=17% Similarity=0.210 Sum_probs=66.8
Q ss_pred CcceEEEE-eCCE--EEEEEcCccc-----------CCCChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCc--
Q 039280 293 SSLYYSFN-AGGI--HFVMLSAYID-----------YDKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHY-- 356 (487)
Q Consensus 293 ~~~yYsf~-~g~v--~fi~Ldt~~~-----------~~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~-- 356 (487)
+..||+|+ .+++ ++|+||+... ....++|++||+++|+++.. +.+++|+++|+|+.+......
T Consensus 291 G~~yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~a-~~p~VVV~hHpPi~t~gi~~md~ 369 (492)
T TIGR03768 291 DFACYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQA-DGQLMIIAAHIPIAVSPIGSEME 369 (492)
T ss_pred CcceeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCcC-CCceEEEEeCCCcccCCccchhh
Confidence 34599999 5855 9999998641 12469999999999998743 457788888888875222110
Q ss_pred -c----------hhHHHHHHHHHHHHHc-CCcEEEeCcccccee
Q 039280 357 -R----------EVECMRVEMEDLLYYY-GVDIVFNGHVHAYER 388 (487)
Q Consensus 357 -~----------~~~~~r~~l~~l~~~~-~VdlvlsGH~H~yeR 388 (487)
. .....-.+|..+|.+| +|.++||||.|.-..
T Consensus 370 w~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHrn~v 413 (492)
T TIGR03768 370 WWLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHLNTV 413 (492)
T ss_pred hccccccccccccccccHHHHHHHHhcCCCeEEEEcCCcccccc
Confidence 0 0001124788999999 588999999996443
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes. |
| >PF14008 Metallophos_C: Iron/zinc purple acid phosphatase-like protein C; PDB: 3KBP_B 1KBP_B 4KBP_C 2QFP_B 2QFR_A 1XZW_B | Back alignment and domain information |
|---|
Probab=99.39 E-value=3.7e-13 Score=101.53 Aligned_cols=50 Identities=38% Similarity=0.570 Sum_probs=31.8
Q ss_pred CCcEEEEeCCccccCCcccccCCCCCCCCCCCCCCCCCCccccccccCCCCCCcccCCCCCccceecCCcceEEEEEEcc
Q 039280 400 CGPVYILVGDGGNVEGLDIVHADEPGNCPEPSTTPDMGGSCAFNFTSGPASGKFCWDRQPDYSAYRESSFGHGILEVLIS 479 (487)
Q Consensus 400 ~g~vyIv~G~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~r~~~~G~~~l~~~n~ 479 (487)
++||||++|+||+ +++. .+.++|+|+++|..+|||++|+|+|+
T Consensus 1 kapVhiv~G~aG~--~l~~-----------------------------------~~~~~~~wsa~r~~~~Gy~~l~v~N~ 43 (62)
T PF14008_consen 1 KAPVHIVVGAAGN--GLDP-----------------------------------FPYPPPEWSAFRDSEYGYGRLTVANA 43 (62)
T ss_dssp TS-EEEEE--S-T-----------------------------------------B-SS--TTEEEEE---EEEEEEE-SS
T ss_pred CCCEEEEECcCCC--Cccc-----------------------------------ccCCCCCeeeeeccccCEEEEEEEcC
Confidence 4799999999999 4331 12467899999999999999999999
Q ss_pred ceeEEee
Q 039280 480 LSIALTT 486 (487)
Q Consensus 480 t~~~~~~ 486 (487)
|||+||.
T Consensus 44 T~l~~e~ 50 (62)
T PF14008_consen 44 THLHWEF 50 (62)
T ss_dssp SEEEEEE
T ss_pred CeEEEEE
Confidence 9999996
|
|
| >cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.2e-11 Score=104.66 Aligned_cols=116 Identities=29% Similarity=0.457 Sum_probs=81.0
Q ss_pred EEEecCCCCCChHHHH---HHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhhhccc
Q 039280 176 AVVGDLGLTYNTTTTV---AHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYMQPLV 252 (487)
Q Consensus 176 ~v~gD~~~~~~~~~~l---~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~~~l~ 252 (487)
+++||+|......... ....+.++++|+++||+++.. .. ..+..+........
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~------~~------------------~~~~~~~~~~~~~~ 56 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDG------PD------------------PEEVLAAALALLLL 56 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCC------CC------------------chHHHHHHHHHhhc
Confidence 4689999876543332 344457899999999999631 10 11122221233335
Q ss_pred cCCCEEEecCCcccccCccchhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCcccCCCChHHHHHHHHHhccc
Q 039280 253 SNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYIDYDKSSDQYKWLESDLGDV 332 (487)
Q Consensus 253 ~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~ 332 (487)
...|+++++||||
T Consensus 57 ~~~~~~~~~GNHD------------------------------------------------------------------- 69 (131)
T cd00838 57 LGIPVYVVPGNHD------------------------------------------------------------------- 69 (131)
T ss_pred CCCCEEEeCCCce-------------------------------------------------------------------
Confidence 6899999999999
Q ss_pred CCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceecc
Q 039280 333 DREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSN 390 (487)
Q Consensus 333 ~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~ 390 (487)
|+++|.|++.............++.+..++.+.+++++|+||.|.+.+..
T Consensus 70 --------i~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 70 --------ILLTHGPPYDPLDELSPDEDPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred --------EEEeccCCCCCchhhcccchhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 89999998765433222222246788899999999999999999999884
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me |
| >KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.3e-10 Score=110.27 Aligned_cols=209 Identities=21% Similarity=0.307 Sum_probs=116.9
Q ss_pred CcEEEEEecCCCCCC--------------------hHHHHHHHHH-cCCCEEEEcCccccccccccCCCccccccccCCC
Q 039280 172 PNRIAVVGDLGLTYN--------------------TTTTVAHLMS-NHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIE 230 (487)
Q Consensus 172 ~~~f~v~gD~~~~~~--------------------~~~~l~~l~~-~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~ 230 (487)
+|||+.++|+|.+.. ....++++++ .+||||+++||+++....
T Consensus 53 ~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g~~t---------------- 116 (379)
T KOG1432|consen 53 TFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFGHST---------------- 116 (379)
T ss_pred ceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCccccccc----------------
Confidence 789999999998632 2234566554 699999999999974210
Q ss_pred CcccchhhHHHHHHHHhhhcc-ccCCCEEEecCCcccccCccchhhHHhhcccCCCCCCC---CCCCcceEEEEeCC---
Q 039280 231 SPIQETYQPRWDYWGRYMQPL-VSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEES---GSSSSLYYSFNAGG--- 303 (487)
Q Consensus 231 ~~~~~~y~~~w~~~~~~~~~l-~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~---~~~~~~yYsf~~g~--- 303 (487)
+ .++ ..+++.++|. ..++||.++.||||-...........+... +|..-+ ...+..+--..+|+
T Consensus 117 ---~-Da~---~sl~kAvaP~I~~~IPwA~~lGNHDdes~ltr~ql~~~i~~--lP~s~~~v~p~dg~~~~~~g~gnyn~ 187 (379)
T KOG1432|consen 117 ---Q-DAA---TSLMKAVAPAIDRKIPWAAVLGNHDDESDLTRLQLMKFISK--LPYSLSQVNPPDGHMYIIDGFGNYNL 187 (379)
T ss_pred ---H-hHH---HHHHHHhhhHhhcCCCeEEEecccccccccCHHHHHHHHhc--CCCccccCCCcccceeeeecccceEE
Confidence 0 111 2355666776 689999999999998754333333333222 222100 00011110111111
Q ss_pred ---------------EEEEEEcCccc---------C-CCChHHHHHHHHHhcc---cCCCCCC-eEEEEcCCCcc--ccC
Q 039280 304 ---------------IHFVMLSAYID---------Y-DKSSDQYKWLESDLGD---VDREVTP-WLIAAWHPPWY--STY 352 (487)
Q Consensus 304 ---------------v~fi~Ldt~~~---------~-~~~~~Q~~WL~~~L~~---~~r~~~~-w~Iv~~H~P~y--~~~ 352 (487)
..++.||+..+ | .....|.+||+..-++ .+..-.| --+++.|.|+- +..
T Consensus 188 ~i~~~~ds~~~~~sv~~lyfld~~~~~s~~~~~~~Ydwik~sq~~wl~~~~~~~~~~~~~~~P~p~La~~HIP~~E~~~~ 267 (379)
T KOG1432|consen 188 QIEGAIDSELENKSVFNLYFLDSSSYTSVPPLLPGYDWIKESQLEWLSDTSKEFKEPNSKYNPQPGLAFFHIPLPEFLEL 267 (379)
T ss_pred EeccCCCcccccCceeeEEEEecCCcccccccccCccchhhhhHHHHhhhhhhhhcccCccCCCCceEEEEcccHHHhhc
Confidence 22445554322 1 2367899999987732 1112223 36888899863 221
Q ss_pred CC------Ccchh---HHHHHHHHHHHH-HcCCcEEEeCccccceecccccCCccCCCCcEEEEeCCccc
Q 039280 353 SA------HYREV---ECMRVEMEDLLY-YYGVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDGGN 412 (487)
Q Consensus 353 ~~------~~~~~---~~~r~~l~~l~~-~~~VdlvlsGH~H~yeR~~p~~~~~~~~~g~vyIv~G~gG~ 412 (487)
.. ...+. ......+...|. ..+|+.|++||.|...--.+. ++.+++.=|+|+.
T Consensus 268 ~~~tp~~g~~~E~~~~~~~~sg~~~~L~~r~~Vk~vf~GHdHvNDfC~~~-------k~~~wlCygGgaG 330 (379)
T KOG1432|consen 268 ESKTPLIGVFQEGVSASKHNSGFLTTLVNRGNVKGVFCGHDHVNDFCGEL-------KGELWLCYGGGAG 330 (379)
T ss_pred cCCCcccceeeccccccccccHHHHHHHhccCcceEEeccccccceeccc-------CCeEEEEecCCCc
Confidence 11 01111 111245556666 778999999999987666543 3446766665544
|
|
| >cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.2e-10 Score=109.81 Aligned_cols=178 Identities=23% Similarity=0.253 Sum_probs=109.9
Q ss_pred EEEEEecCCCCCChHHHHHHHH----HcCCCEEEEcCccccccccccCCCccc--cccccCCCCcccchhhHHHHHHHH-
Q 039280 174 RIAVVGDLGLTYNTTTTVAHLM----SNHPDLLLLIGDLSYADLYLTNGTKSS--CYLCQSIESPIQETYQPRWDYWGR- 246 (487)
Q Consensus 174 ~f~v~gD~~~~~~~~~~l~~l~----~~~pdfvl~~GDl~y~d~~~~~g~~~~--~~~~~~~~~~~~~~y~~~w~~~~~- 246 (487)
||++.++.+...........+. +.+||++|++||.+|+|.......... .-..........+.|+..+..+..
T Consensus 1 r~a~~SC~~~~~~~~~~~~~~~~~~~~~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~~ 80 (228)
T cd07389 1 RFAFGSCNKYESGYFNAYRALAYDHSEEDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRSD 80 (228)
T ss_pred CEEEEECCCCCCCCcHHHHHHhhhccccCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcCC
Confidence 5788888877665555555554 679999999999999874311100000 000000012233445555555432
Q ss_pred -hhhccccCCCEEEecCCcccccCccc----------------hhhHHhhcccCCCCCCCC--CCCcceEEEEeCCE-EE
Q 039280 247 -YMQPLVSNVPTMVIEGEHEIERQAEN----------------QTFAAYSSRFAFPSEESG--SSSSLYYSFNAGGI-HF 306 (487)
Q Consensus 247 -~~~~l~~~~P~~~v~GNHD~~~~~~~----------------~~~~~y~~~f~~P~~~~~--~~~~~yYsf~~g~v-~f 306 (487)
.++.+.+.+|++.++.+||+..+.+. .....|......+..... .....|++|.+|.. .|
T Consensus 81 p~~~~~~~~~p~~~iwDDHDi~~n~~~~~~~~~~~~~~~~~~~~a~~ay~e~~~~~~~~~~~~~~~~~y~~~~~G~~~~~ 160 (228)
T cd07389 81 PDLQRLLAQVPTIGIWDDHDIGDNWGGDGAWVQDSPVFYARKAAARQAYLEFQPVRNPSPRRGGRGGIYRSFRFGDLVDL 160 (228)
T ss_pred HHHHHHhhcCCEEEeccccccccccccccccccCcchHHHHHHHHHHHHHHHcCCCCCCccCCCCceEEEEEecCCcceE
Confidence 35667788999999999999876543 112344444444333222 34678999999986 99
Q ss_pred EEEcCcccCCCChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCC--cEEEeCccc
Q 039280 307 VMLSAYIDYDKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGV--DIVFNGHVH 384 (487)
Q Consensus 307 i~Ldt~~~~~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~V--dlvlsGH~H 384 (487)
|+||+.... ..+......|+.+..++.+.++ -++|||++|
T Consensus 161 ~~lD~R~~R--------------------------------------d~W~~~~~er~~l~~~~~~~~~~~vv~lSGDvH 202 (228)
T cd07389 161 ILLDTRTYR--------------------------------------DSWDGYPAERERLLDLLAKRKIKNVVFLSGDVH 202 (228)
T ss_pred EEEeccccc--------------------------------------ccccccHHHHHHHHHHHHHhCCCCeEEEecHHH
Confidence 999998754 2233334456777777655543 477999999
Q ss_pred cceec
Q 039280 385 AYERS 389 (487)
Q Consensus 385 ~yeR~ 389 (487)
..+-.
T Consensus 203 ~~~~~ 207 (228)
T cd07389 203 LAEAS 207 (228)
T ss_pred HHHHh
Confidence 76655
|
PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF |
| >cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.22 E-value=5.8e-10 Score=106.35 Aligned_cols=195 Identities=19% Similarity=0.219 Sum_probs=101.6
Q ss_pred cEEEEEecCCCCCChHHHHHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhhhccc
Q 039280 173 NRIAVVGDLGLTYNTTTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYMQPLV 252 (487)
Q Consensus 173 ~~f~v~gD~~~~~~~~~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~~~l~ 252 (487)
+||+++||+|..... ..++.+.+.+||+|+++||++... .++.+.+..+
T Consensus 1 ~rIa~isDiHg~~~~-~~~~~l~~~~pD~Vl~~GDi~~~~-----------------------------~~~~~~l~~l- 49 (238)
T cd07397 1 LRIAIVGDVHGQWDL-EDIKALHLLQPDLVLFVGDFGNES-----------------------------VQLVRAISSL- 49 (238)
T ss_pred CEEEEEecCCCCchH-HHHHHHhccCCCEEEECCCCCcCh-----------------------------HHHHHHHHhC-
Confidence 589999999976443 234556667899999999998320 1122333333
Q ss_pred cCCCEEEecCCcccccCccc-hhhHHhhcccCCCCCCCCCCCcceE---EEEeCCEEEEEEcCcc---------------
Q 039280 253 SNVPTMVIEGEHEIERQAEN-QTFAAYSSRFAFPSEESGSSSSLYY---SFNAGGIHFVMLSAYI--------------- 313 (487)
Q Consensus 253 ~~~P~~~v~GNHD~~~~~~~-~~~~~y~~~f~~P~~~~~~~~~~yY---sf~~g~v~fi~Ldt~~--------------- 313 (487)
..|+++++||||....... .....+......-. .... ..++....+.++.++.
T Consensus 50 -~~p~~~V~GNHD~~~~~~~~~k~~~l~~~L~~lg-------~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr 121 (238)
T cd07397 50 -PLPKAVILGNHDAWYDATFRKKGDRVQEQLELLG-------DLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVK 121 (238)
T ss_pred -CCCeEEEcCCCcccccccccchHHHHHHHHHHhC-------CcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHH
Confidence 4689999999998643211 01222222221111 1111 1112221222222211
Q ss_pred -cC--CCChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCC-------------CcchhHHHHHHHHHHHHHcCCcE
Q 039280 314 -DY--DKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSA-------------HYREVECMRVEMEDLLYYYGVDI 377 (487)
Q Consensus 314 -~~--~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~-------------~~~~~~~~r~~l~~l~~~~~Vdl 377 (487)
.| ..-.+-.+.+.+.++..+.. .+ .|++.|.++....+. .......+++++..+-..-.+++
T Consensus 122 ~~fgi~s~~eA~~~ive~~~~~~~~-~~-~VliaH~~~~G~g~~~~~~cg~d~~~~~~~~G~~~l~~ai~~~~~~~~~~l 199 (238)
T cd07397 122 AVYGVISLEESAQRIIAAAKKAPPD-LP-LILLAHNGPSGLGSDAEDPCGRDWKPPGGDWGDPDLALAISQIQQGRQVPL 199 (238)
T ss_pred HHhCCCCHHHHHHHHHHHhhhcCCC-CC-eEEEeCcCCcCCCcccccccccccCCcCCCCCCHHHHHHHHHHhccCCCCE
Confidence 01 01123334444444433222 23 788899988654311 00123445666655543345899
Q ss_pred EEeCccccceecccccCC--ccCCCCcEEEEeC
Q 039280 378 VFNGHVHAYERSNRVYNY--SLDPCGPVYILVG 408 (487)
Q Consensus 378 vlsGH~H~yeR~~p~~~~--~~~~~g~vyIv~G 408 (487)
+++||.|.--|...-... ..+..|++|+...
T Consensus 200 ~~fGH~H~~l~~~~~~r~~~~~~~~gt~y~N~a 232 (238)
T cd07397 200 VVFGHMHHRLRRGKGLRNMIAVDREGTVYLNAA 232 (238)
T ss_pred EEeCCccCcccccccccceeeecCCCeEEEecc
Confidence 999999987544221111 1356899998654
|
DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy |
| >cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.7e-10 Score=101.48 Aligned_cols=117 Identities=20% Similarity=0.213 Sum_probs=73.8
Q ss_pred EEEEEecCCCCCChHHHHHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhhhcccc
Q 039280 174 RIAVVGDLGLTYNTTTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYMQPLVS 253 (487)
Q Consensus 174 ~f~v~gD~~~~~~~~~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~~~l~~ 253 (487)
||+++||+|.... .+...++|+|+++||++.. +. ...++.+.+.++.+.
T Consensus 1 ~i~~isD~H~~~~------~~~~~~~D~vi~~GD~~~~------~~------------------~~~~~~~~~~l~~~~- 49 (135)
T cd07379 1 RFVCISDTHSRHR------TISIPDGDVLIHAGDLTER------GT------------------LEELQKFLDWLKSLP- 49 (135)
T ss_pred CEEEEeCCCCCCC------cCcCCCCCEEEECCCCCCC------CC------------------HHHHHHHHHHHHhCC-
Confidence 5899999998754 2334689999999999852 11 112233444444432
Q ss_pred CCCEEEecCCcccccCccchhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCcccCCCChHHHHHHHHHhcccC
Q 039280 254 NVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYIDYDKSSDQYKWLESDLGDVD 333 (487)
Q Consensus 254 ~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~ 333 (487)
..++++++||||.... +
T Consensus 50 ~~~~~~v~GNHD~~~~-----------------------------------------------------------~---- 66 (135)
T cd07379 50 HPHKIVIAGNHDLTLD-----------------------------------------------------------P---- 66 (135)
T ss_pred CCeEEEEECCCCCcCC-----------------------------------------------------------C----
Confidence 1235789999996310 1
Q ss_pred CCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccce
Q 039280 334 REVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYE 387 (487)
Q Consensus 334 r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~ye 387 (487)
. .+.|+++|.|++............-.+.+.+++++++++++|+||+|...
T Consensus 67 -~--~~~ilv~H~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~ 117 (135)
T cd07379 67 -E--DTDILVTHGPPYGHLDLVSSGQRVGCEELLNRVQRVRPKLHVFGHIHEGY 117 (135)
T ss_pred -C--CCEEEEECCCCCcCccccccCcccCCHHHHHHHHHHCCcEEEEcCcCCcC
Confidence 1 23688889998764322111011112456677888999999999999874
|
239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme |
| >PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.6e-10 Score=103.49 Aligned_cols=139 Identities=22% Similarity=0.301 Sum_probs=81.6
Q ss_pred cEEEEEecCCCCCCh-HHHHHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhhhcc
Q 039280 173 NRIAVVGDLGLTYNT-TTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYMQPL 251 (487)
Q Consensus 173 ~~f~v~gD~~~~~~~-~~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~~~l 251 (487)
|||+++||+|..... .+.++.+ .++|+|+++||++.. .++.+.++.+
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~------------------------------~~~~~~~~~~ 48 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP------------------------------EEVLELLRDI 48 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH------------------------------HHHHHHHHHH
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH------------------------------HHHHHHHhcC
Confidence 699999999986432 3345545 579999999999831 2233333333
Q ss_pred ccCCCEEEecCCcccccCccchhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCcccCCCChHHHHHHHHHhcc
Q 039280 252 VSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYIDYDKSSDQYKWLESDLGD 331 (487)
Q Consensus 252 ~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~ 331 (487)
|++++.||||... +....... . +.+.+..
T Consensus 49 ----~~~~v~GNHD~~~---------~~~~~~~~---------~-----------------------------~~~~~~~ 77 (156)
T PF12850_consen 49 ----PVYVVRGNHDNWA---------FPNENDEE---------Y-----------------------------LLDALRL 77 (156)
T ss_dssp ----EEEEE--CCHSTH---------HHSEECTC---------S-----------------------------SHSEEEE
T ss_pred ----CEEEEeCCccccc---------chhhhhcc---------c-----------------------------cccceee
Confidence 8999999999631 11111000 0 1111110
Q ss_pred cCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceecccccCCccCCCCcEEEEeCCcc
Q 039280 332 VDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDGG 411 (487)
Q Consensus 332 ~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~p~~~~~~~~~g~vyIv~G~gG 411 (487)
......|++.|...+.... ..+.+..++...+++++|+||.|...... ..++.++..|+.+
T Consensus 78 ---~~~~~~i~~~H~~~~~~~~--------~~~~~~~~~~~~~~~~~~~GH~H~~~~~~--------~~~~~~~~~Gs~~ 138 (156)
T PF12850_consen 78 ---TIDGFKILLSHGHPYDVQW--------DPAELREILSRENVDLVLHGHTHRPQVFK--------IGGIHVINPGSIG 138 (156)
T ss_dssp ---EETTEEEEEESSTSSSSTT--------THHHHHHHHHHTTSSEEEESSSSSEEEEE--------ETTEEEEEE-GSS
T ss_pred ---eecCCeEEEECCCCccccc--------ChhhhhhhhcccCCCEEEcCCcccceEEE--------ECCEEEEECCcCC
Confidence 1123478888876655321 12345577789999999999999987762 4678889988877
Q ss_pred cc
Q 039280 412 NV 413 (487)
Q Consensus 412 ~~ 413 (487)
..
T Consensus 139 ~~ 140 (156)
T PF12850_consen 139 GP 140 (156)
T ss_dssp S-
T ss_pred CC
Confidence 64
|
; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A .... |
| >COG1408 Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.14 E-value=6.9e-10 Score=109.28 Aligned_cols=172 Identities=19% Similarity=0.187 Sum_probs=98.3
Q ss_pred CcEEEEEecCCCCCCh---HHHHHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhh
Q 039280 172 PNRIAVVGDLGLTYNT---TTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYM 248 (487)
Q Consensus 172 ~~~f~v~gD~~~~~~~---~~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~ 248 (487)
+++++.++|+|..... .+.+.++.+..||+|+++||++..+. .+....+.+.+
T Consensus 44 ~~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~------------------------~~~~~~~~~~L 99 (284)
T COG1408 44 GLKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDR------------------------PPGVAALALFL 99 (284)
T ss_pred CeEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCC------------------------CCCHHHHHHHH
Confidence 6899999999988655 33455566678899999999995210 02345667788
Q ss_pred hccccCCCEEEecCCcccccCccchhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEE--EcCccc-CCCChHHHHHH
Q 039280 249 QPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVM--LSAYID-YDKSSDQYKWL 325 (487)
Q Consensus 249 ~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~--Ldt~~~-~~~~~~Q~~WL 325 (487)
+++.+..+++++.||||+.............+.-. ..-.+..+.+....... .+.... ....+++..-+
T Consensus 100 ~~L~~~~gv~av~GNHd~~~~~~~~~~~~l~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 171 (284)
T COG1408 100 AKLKAPLGVFAVLGNHDYGVDRSNVYIGDLLEELG--------RVVLRNEIAVIDLLALRIEVGGLDLYLAGVEDILAGL 171 (284)
T ss_pred HhhhccCCEEEEecccccccccccchhhhhhhhcc--------eeeecccchhcccccccccccccccccccCchHHhhC
Confidence 88888999999999999975432211111111100 00011111111111111 000000 01112232222
Q ss_pred H-----------HHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceecccccC
Q 039280 326 E-----------SDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYN 394 (487)
Q Consensus 326 ~-----------~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~p~~~ 394 (487)
. +.+.+.+ .....|++.|.|-.- ..+.+++|||+||||+|.-|-..|.+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~--~~~~~IlL~H~P~~~-----------------~~~~~~~~dLvLSGHTHGGQi~~p~~~ 232 (284)
T COG1408 172 PLAPFTIGLDIAEALKQLD--EDLPGILLSHEPDII-----------------LQLRLYGVDLVLSGHTHGGQIRLPLWG 232 (284)
T ss_pred cccccccccchhhhhcccc--ccccceEeccCCcee-----------------hhhccCcceEEEeccccCCeEEeeccc
Confidence 2 3344432 223489999999643 234567999999999999998877654
|
|
| >PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.1e-09 Score=105.95 Aligned_cols=198 Identities=17% Similarity=0.226 Sum_probs=107.6
Q ss_pred cEEEEEecCCCCCChH----HHHHHHH--HcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHH
Q 039280 173 NRIAVVGDLGLTYNTT----TTVAHLM--SNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGR 246 (487)
Q Consensus 173 ~~f~v~gD~~~~~~~~----~~l~~l~--~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~ 246 (487)
||+++++|+|.+.... ..++.+. +.+||+|+++||++.. +. |.. .. ........+
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~~~~d~l~i~GDl~d~--~~--g~~-----------~~----~~~~~~~~~ 61 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEARQADALYILGDLFEA--WI--GDD-----------DP----SPFAREIAA 61 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhhccCCEEEEccceecc--cc--ccC-----------cC----CHHHHHHHH
Confidence 5899999999875432 2233332 3589999999999942 11 110 00 011233444
Q ss_pred hhhccc-cCCCEEEecCCcccccCccchhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCcccCCCChHHHHHH
Q 039280 247 YMQPLV-SNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYIDYDKSSDQYKWL 325 (487)
Q Consensus 247 ~~~~l~-~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~~~~~~~Q~~WL 325 (487)
.++.+. ..+|+++++||||.... ..+.....+.. . .....+++++.+++..-.-.. ...+..++++
T Consensus 62 ~l~~l~~~g~~v~~v~GNHD~~~~------~~~~~~~g~~~-----l-~~~~~~~~~g~~i~l~HGd~~-~~~d~~y~~~ 128 (241)
T PRK05340 62 ALKALSDSGVPCYFMHGNRDFLLG------KRFAKAAGMTL-----L-PDPSVIDLYGQRVLLLHGDTL-CTDDKAYQRF 128 (241)
T ss_pred HHHHHHHcCCeEEEEeCCCchhhh------HHHHHhCCCEE-----e-CCcEEEEECCEEEEEECCccc-ccCCHHHHHH
Confidence 555553 34899999999997421 11222221100 0 112346778887777755322 1234666666
Q ss_pred HHHhcccCCCCCCeEEEEcCCCccccCCC-------------Ccch---hHHHHHHHHHHHHHcCCcEEEeCccccceec
Q 039280 326 ESDLGDVDREVTPWLIAAWHPPWYSTYSA-------------HYRE---VECMRVEMEDLLYYYGVDIVFNGHVHAYERS 389 (487)
Q Consensus 326 ~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~-------------~~~~---~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~ 389 (487)
++.+++ ||...++|.+++..... .... .....+.+.+++++++++++++||+|.-...
T Consensus 129 r~~~r~------~~~~~~~~~~p~~~~~~ia~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~ 202 (241)
T PRK05340 129 RRKVRN------PWLQWLFLALPLSIRLRIAAKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAIH 202 (241)
T ss_pred HHHHhC------HHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCccee
Confidence 666654 12333344443321000 0000 0001246778899999999999999986543
Q ss_pred ccccCCccCCCCcEEEEeCCccc
Q 039280 390 NRVYNYSLDPCGPVYILVGDGGN 412 (487)
Q Consensus 390 ~p~~~~~~~~~g~vyIv~G~gG~ 412 (487)
.+.+ +..+..|++-|+...
T Consensus 203 -~~~~---~~~~~~~~~lgdw~~ 221 (241)
T PRK05340 203 -QLQA---GGQPATRIVLGDWHE 221 (241)
T ss_pred -eccC---CCcceEEEEeCCCCC
Confidence 1111 111247899999854
|
|
| >TIGR00040 yfcE phosphoesterase, MJ0936 family | Back alignment and domain information |
|---|
Probab=99.00 E-value=7.6e-09 Score=93.45 Aligned_cols=37 Identities=27% Similarity=0.333 Sum_probs=27.7
Q ss_pred cEEEEEecCCCCCChHHH-HHHHHHc-CCCEEEEcCccc
Q 039280 173 NRIAVVGDLGLTYNTTTT-VAHLMSN-HPDLLLLIGDLS 209 (487)
Q Consensus 173 ~~f~v~gD~~~~~~~~~~-l~~l~~~-~pdfvl~~GDl~ 209 (487)
+|++++||+|......+. ++.+... ++|.|+++||++
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~ 39 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT 39 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC
Confidence 589999999976543333 3444455 799999999997
|
Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required. |
| >cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.96 E-value=4.3e-09 Score=94.58 Aligned_cols=56 Identities=21% Similarity=0.150 Sum_probs=37.8
Q ss_pred EEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceecccccCCccCCCCcEEEEeCCccc
Q 039280 340 LIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDGGN 412 (487)
Q Consensus 340 ~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~p~~~~~~~~~g~vyIv~G~gG~ 412 (487)
+|++.|.+....... . + . ..++.+.++|++++||+|..... ..+++++|..|+.|.
T Consensus 77 ~i~v~Hg~~~~~~~~----~---~-~-~~~~~~~~~d~vi~GHtH~~~~~--------~~~~~~~inpGs~~~ 132 (155)
T cd00841 77 RIFLTHGHLYGVKNG----L---D-R-LYLAKEGGADVVLYGHTHIPVIE--------KIGGVLLLNPGSLSL 132 (155)
T ss_pred EEEEECCcccccccc----h---h-h-hhhhhhcCCCEEEECcccCCccE--------EECCEEEEeCCCccC
Confidence 677888776543211 0 1 1 45567789999999999976443 135788888888776
|
YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph |
| >cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.95 E-value=4.6e-09 Score=97.15 Aligned_cols=39 Identities=18% Similarity=0.250 Sum_probs=31.5
Q ss_pred EEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceec
Q 039280 341 IAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERS 389 (487)
Q Consensus 341 Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~ 389 (487)
|+++|.|+..... ..+..++.++.++++|+||.|.+.+.
T Consensus 112 i~lsH~P~~~~~~----------~~~~~~~~~~~p~~Ifs~H~H~s~~~ 150 (195)
T cd08166 112 IMLSHVPLLAEGG----------QALKHVVTDLDPDLIFSAHRHKSSIF 150 (195)
T ss_pred eeeeccccccccc----------HHHHHHHHhcCceEEEEcCccceeeE
Confidence 9999999865321 25668889999999999999998765
|
A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R |
| >KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.92 E-value=2.1e-08 Score=104.84 Aligned_cols=179 Identities=17% Similarity=0.264 Sum_probs=104.4
Q ss_pred HHHHHHHHc--CCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhhhccccCCCEEEecCCccc
Q 039280 189 TTVAHLMSN--HPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEI 266 (487)
Q Consensus 189 ~~l~~l~~~--~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~~~l~~~~P~~~v~GNHD~ 266 (487)
.+|++|++. ++|||+++||++-.+.+. ...+.--.......+.|......+|+++++||||.
T Consensus 199 s~L~~ike~~~~iD~I~wTGD~~~H~~w~----------------~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~ 262 (577)
T KOG3770|consen 199 SALDHIKENHKDIDYIIWTGDNVAHDVWA----------------QTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEI 262 (577)
T ss_pred HHHHHHHhcCCCCCEEEEeCCCCcccchh----------------hhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCC
Confidence 356666654 489999999999654221 11111112223344556677789999999999998
Q ss_pred ccCcc------ch------hhHHhhccc--CCCCCCC-CCCCcceEEE-EeCCEEEEEEcCcccC----------CCChH
Q 039280 267 ERQAE------NQ------TFAAYSSRF--AFPSEES-GSSSSLYYSF-NAGGIHFVMLSAYIDY----------DKSSD 320 (487)
Q Consensus 267 ~~~~~------~~------~~~~y~~~f--~~P~~~~-~~~~~~yYsf-~~g~v~fi~Ldt~~~~----------~~~~~ 320 (487)
..... .+ .|.++...| .+|.... ....+.+|.- -++|.++|+||+..-+ .....
T Consensus 263 ~P~N~F~~~~~~~~~~~~wly~~~~~~W~~wlp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~ 342 (577)
T KOG3770|consen 263 HPVNLFAPGSVPKRHSQLWLYKHLAGAWSTWLPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPID 342 (577)
T ss_pred CcHhhcCCCCCcchhhhhHHHHHHHhhhhccCCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchH
Confidence 63210 00 111221111 1333211 1234456643 4689999999985322 12578
Q ss_pred HHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcC--CcEEEeCccccceec
Q 039280 321 QYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYG--VDIVFNGHVHAYERS 389 (487)
Q Consensus 321 Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~--VdlvlsGH~H~yeR~ 389 (487)
|++|+..+|.++..+... |-+++|.|+-.. .. .+.....+-.++.++. +.-.|.||.|.-+-.
T Consensus 343 ~lqWf~~~L~~ae~~Gek-Vhil~HIPpG~~---~c--~~~ws~~f~~iv~r~~~tI~gqf~GH~h~d~f~ 407 (577)
T KOG3770|consen 343 QLQWFVDQLQEAESAGEK-VHILGHIPPGDG---VC--LEGWSINFYRIVNRFRSTIAGQFYGHTHIDEFR 407 (577)
T ss_pred HhhHHHHHHHHHHhcCCE-EEEEEeeCCCCc---ch--hhhhhHHHHHHHHHHHHhhhhhccccCcceeEE
Confidence 899999999987544433 788899997531 11 1112234445555553 334599999987644
|
|
| >cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.2e-08 Score=89.07 Aligned_cols=49 Identities=14% Similarity=0.040 Sum_probs=32.5
Q ss_pred EEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceec
Q 039280 340 LIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERS 389 (487)
Q Consensus 340 ~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~ 389 (487)
.|+++|+|++...... .....-.+.+.+++.+++++++|+||+|.....
T Consensus 58 ~Ilv~H~pp~~~~~~~-~~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~ 106 (129)
T cd07403 58 DILLTHAPPAGIGDGE-DFAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGY 106 (129)
T ss_pred CEEEECCCCCcCcCcc-cccccCHHHHHHHHHHHCCcEEEEcCcCCCcCc
Confidence 5788888876432211 000112456778888999999999999976554
|
TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.87 E-value=4.4e-08 Score=91.08 Aligned_cols=191 Identities=20% Similarity=0.247 Sum_probs=112.5
Q ss_pred CcEEEEEecCCCCCCh-HHHHHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhhhc
Q 039280 172 PNRIAVVGDLGLTYNT-TTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYMQP 250 (487)
Q Consensus 172 ~~~f~v~gD~~~~~~~-~~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~~~ 250 (487)
.+|+++++|+|..... .+.+..+...++|+++.+||++|.. .+.+. ..-+..| ++.
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~----~~~~~-------------~~~~~~~------~e~ 59 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFH----FGPKE-------------VAEELNK------LEA 59 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhh----cCchH-------------HHHhhhH------HHH
Confidence 5899999999987543 3444555556899999999999532 12210 0000001 333
Q ss_pred c-ccCCCEEEecCCcccccCccchhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCcc------cCCCChHH-H
Q 039280 251 L-VSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYI------DYDKSSDQ-Y 322 (487)
Q Consensus 251 l-~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~------~~~~~~~Q-~ 322 (487)
+ ...+|+++++||-|-. .... ......... -+ -+.+++++.|+.+.... .+...+++ +
T Consensus 60 l~~~~~~v~avpGNcD~~-----~v~~-~l~~~~~~v------~~--~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~ 125 (226)
T COG2129 60 LKELGIPVLAVPGNCDPP-----EVID-VLKNAGVNV------HG--RVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIY 125 (226)
T ss_pred HHhcCCeEEEEcCCCChH-----HHHH-HHHhccccc------cc--ceEEecCcEEEEecccCCCCCCCccccCHHHHH
Confidence 3 3589999999998763 1111 111121111 01 45788888888864321 11223333 3
Q ss_pred HHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcch-hHHHHHHHHHHHHHcCCcEEEeCccccceecccccCCccCCCC
Q 039280 323 KWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYRE-VECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCG 401 (487)
Q Consensus 323 ~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~-~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~p~~~~~~~~~g 401 (487)
.-|++-+++.+... .|+++|.|+|......... ...-.+.+.+++++.++-+.+|||.|.+.-.-. -..
T Consensus 126 s~l~~~v~~~~~~~---~Il~~HaPP~gt~~d~~~g~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~-------iG~ 195 (226)
T COG2129 126 SKLKSLVKKADNPV---NILLTHAPPYGTLLDTPSGYVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDK-------IGN 195 (226)
T ss_pred HHHHHHHhcccCcc---eEEEecCCCCCccccCCCCccccchHHHHHHHHHhCCceEEEeeecccccccc-------cCC
Confidence 44555555543111 3999999999865442111 122356788999999999999999998544321 235
Q ss_pred cEEEEeCC
Q 039280 402 PVYILVGD 409 (487)
Q Consensus 402 ~vyIv~G~ 409 (487)
++.|.-|.
T Consensus 196 TivVNPG~ 203 (226)
T COG2129 196 TIVVNPGP 203 (226)
T ss_pred eEEECCCC
Confidence 66666665
|
|
| >PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A | Back alignment and domain information |
|---|
Probab=98.85 E-value=6.8e-08 Score=89.61 Aligned_cols=193 Identities=22% Similarity=0.331 Sum_probs=89.6
Q ss_pred CcEEEEEecCCCCCCh-HHHHHHHHHcCCCEEEEcCccccccccccCCCcccccc-c----cCCC-Ccccc--hhhH-HH
Q 039280 172 PNRIAVVGDLGLTYNT-TTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYL-C----QSIE-SPIQE--TYQP-RW 241 (487)
Q Consensus 172 ~~~f~v~gD~~~~~~~-~~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~-~----~~~~-~~~~~--~y~~-~w 241 (487)
+=|+++++|.+..... .+.+..+.+..||+|+++||+.-.. ...+.|. . ..++ ..+.+ .|+. ..
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~------a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~ 78 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAE------ARSDEYERAQEEQREPDKSEINEEECYDSEAL 78 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TC------HHHHHHHHHHHTT----THHHHHHHHHHHHHH
T ss_pred chhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccc------hhhhHHHHHhhhccCcchhhhhhhhhhhHHHH
Confidence 3489999999765332 2344445567999999999998421 1111110 0 0000 00000 0100 12
Q ss_pred HHHHHhhhccccCCCEEEecCCcccccCccchhh--HHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCcccC-CC-
Q 039280 242 DYWGRYMQPLVSNVPTMVIEGEHEIERQAENQTF--AAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYIDY-DK- 317 (487)
Q Consensus 242 ~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~--~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~~-~~- 317 (487)
+.|++.+..+ .+|.+++|||||... ..| ..|....-.|.-- .-...+.+--|...|+.+..+.-- ..
T Consensus 79 ~~ff~~L~~~--~~p~~~vPG~~Dap~----~~~lr~a~~~e~v~p~~~---~vH~sf~~~~g~y~v~G~GGeI~~~~~~ 149 (255)
T PF14582_consen 79 DKFFRILGEL--GVPVFVVPGNMDAPE----RFFLREAYNAEIVTPHIH---NVHESFFFWKGEYLVAGMGGEITDDQRE 149 (255)
T ss_dssp HHHHHHHHCC---SEEEEE--TTS-SH----HHHHHHHHHCCCC-TTEE---E-CTCEEEETTTEEEEEE-SEEESSS-B
T ss_pred HHHHHHHHhc--CCcEEEecCCCCchH----HHHHHHHhccceecccee---eeeeeecccCCcEEEEecCccccCCCcc
Confidence 3566666554 899999999999742 111 1222222122100 000112233445888888764311 10
Q ss_pred -------ChHHHHHHHHHhcccCCCCCCeEEEEcCCCc-cccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccce
Q 039280 318 -------SSDQYKWLESDLGDVDREVTPWLIAAWHPPW-YSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYE 387 (487)
Q Consensus 318 -------~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~-y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~ye 387 (487)
.....+|..+.|..++ .. -+|+++|.|+ ......+.+ .+.+.+++++|+.++||+||.|.-.
T Consensus 150 ~~~~LrYP~weaey~lk~l~elk--~~-r~IlLfhtpPd~~kg~~h~G-----S~~V~dlIk~~~P~ivl~Ghihe~~ 219 (255)
T PF14582_consen 150 EEFKLRYPAWEAEYSLKFLRELK--DY-RKILLFHTPPDLHKGLIHVG-----SAAVRDLIKTYNPDIVLCGHIHESH 219 (255)
T ss_dssp CSSS-EEEHHHHHHHHGGGGGCT--SS-EEEEEESS-BTBCTCTBTTS-----BHHHHHHHHHH--SEEEE-SSS-EE
T ss_pred ccccccchHHHHHHHHHHHHhcc--cc-cEEEEEecCCccCCCccccc-----HHHHHHHHHhcCCcEEEecccccch
Confidence 1223455566666652 22 3788899998 433222222 2577799999999999999999754
|
|
| >COG1768 Predicted phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.85 E-value=2.9e-08 Score=88.27 Aligned_cols=64 Identities=23% Similarity=0.266 Sum_probs=45.3
Q ss_pred CCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceecccccCCccCCCCcEEEEeCCc
Q 039280 336 VTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDG 410 (487)
Q Consensus 336 ~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~p~~~~~~~~~g~vyIv~G~g 410 (487)
...-+|||.|.|+++..... ..+.+++++++|+.++.||.|.-.|-.+-.. +-.|+.|+.+-+-
T Consensus 157 ~~~~fivM~HYPP~s~~~t~--------~~~sevlee~rv~~~lyGHlHgv~~p~~~~s---~v~Gi~y~LvaaD 220 (230)
T COG1768 157 GVSKFIVMTHYPPFSDDGTP--------GPFSEVLEEGRVSKCLYGHLHGVPRPNIGFS---NVRGIEYMLVAAD 220 (230)
T ss_pred CcCeEEEEEecCCCCCCCCC--------cchHHHHhhcceeeEEeeeccCCCCCCCCcc---cccCceEEEEecc
Confidence 33458999999998754321 3566788899999999999998877543221 3358888776553
|
|
| >cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.4e-08 Score=91.51 Aligned_cols=31 Identities=32% Similarity=0.571 Sum_probs=24.3
Q ss_pred EEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceec
Q 039280 341 IAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERS 389 (487)
Q Consensus 341 Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~ 389 (487)
|++.|.|.+. ++.+++++++|+||+|...+.
T Consensus 107 ~~l~H~p~~~------------------~~~~~~~~~~l~GH~H~~~~~ 137 (156)
T cd08165 107 ILLQHFPLYR------------------LLQWLKPRLVLSGHTHSFCEV 137 (156)
T ss_pred eeeeCChHHH------------------HHHhhCCCEEEEcccCCCcee
Confidence 8889999732 556678899999999986554
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to |
| >TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase | Back alignment and domain information |
|---|
Probab=98.84 E-value=8.6e-08 Score=92.20 Aligned_cols=184 Identities=15% Similarity=0.156 Sum_probs=96.1
Q ss_pred EEEecCCCCCCh----HHHHHHHHH--cCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhhh
Q 039280 176 AVVGDLGLTYNT----TTTVAHLMS--NHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYMQ 249 (487)
Q Consensus 176 ~v~gD~~~~~~~----~~~l~~l~~--~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~~ 249 (487)
++++|+|.+... ...++.+.+ .+||+|+++||++. .+..... . ....+.+.+.++
T Consensus 2 ~~iSDlHl~~~~~~~~~~~l~~l~~~~~~~d~lii~GDi~d--~~~~~~~-------------~----~~~~~~~~~~l~ 62 (231)
T TIGR01854 2 LFISDLHLSPERPDITALFLDFLREEARKADALYILGDLFE--AWIGDDD-------------P----STLARSVAQAIR 62 (231)
T ss_pred eEEEecCCCCCChhHHHHHHHHHHhhhccCCEEEEcCceec--cccCCCC-------------C----CHHHHHHHHHHH
Confidence 689999987542 234555544 37999999999994 2210000 0 011233444555
Q ss_pred cccc-CCCEEEecCCcccccCccchhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCcccCCCChH--------
Q 039280 250 PLVS-NVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYIDYDKSSD-------- 320 (487)
Q Consensus 250 ~l~~-~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~~~~~~~-------- 320 (487)
.+.. .+|+++++||||.... . .+.....+.. .. ....+.+++.+++++-.-... ..+.
T Consensus 63 ~L~~~~~~v~~v~GNHD~~~~---~---~~~~~~gi~~-----l~-~~~~~~~~g~~ill~HGd~~~-~~d~~y~~~r~~ 129 (231)
T TIGR01854 63 QVSDQGVPCYFMHGNRDFLIG---K---RFAREAGMTL-----LP-DPSVIDLYGQKVLLMHGDTLC-TDDTAYQAFRAK 129 (231)
T ss_pred HHHHCCCeEEEEcCCCchhhh---H---HHHHHCCCEE-----EC-CCEEEEECCEEEEEEcCcccc-CCCHHHHHHHHH
Confidence 5533 5899999999998521 1 1211111100 00 112356666666665432111 1112
Q ss_pred ----------------HHHHHHHHhcccCCCC---CCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeC
Q 039280 321 ----------------QYKWLESDLGDVDREV---TPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNG 381 (487)
Q Consensus 321 ----------------Q~~WL~~~L~~~~r~~---~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsG 381 (487)
...||.+.+.+..+.. .+ ..++.+ ..+.+++++.+++++++++|
T Consensus 130 ~r~~~~~~~~~~l~~~~r~~l~~~~~~~s~~~~~~~~-~~~~~~----------------~~~~~~~~~~~~~~~~~i~G 192 (231)
T TIGR01854 130 VHQPWLQRLFLHLPLAVRVKLARKIRAESRADKQMKS-QDIMDV----------------NPAEVAAVMRRYGVDRLIHG 192 (231)
T ss_pred HhCHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCCCc-chhhCC----------------CHHHHHHHHHHcCCCEEEEC
Confidence 2333434333321100 00 011111 12346778888999999999
Q ss_pred ccccceecccccCCccCCCCcEEEEeCCccc
Q 039280 382 HVHAYERSNRVYNYSLDPCGPVYILVGDGGN 412 (487)
Q Consensus 382 H~H~yeR~~p~~~~~~~~~g~vyIv~G~gG~ 412 (487)
|+|.-... ++.. +..+..|++.|+.-.
T Consensus 193 HtH~~~~~-~~~~---~~~~~~~~~lgdW~~ 219 (231)
T TIGR01854 193 HTHRPAIH-PLQA---DGQPATRIVLGDWYR 219 (231)
T ss_pred CccCccee-eccc---CCCccEEEEECCCcc
Confidence 99987644 3211 223568999999853
|
This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown. |
| >cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.82 E-value=4.2e-08 Score=89.82 Aligned_cols=32 Identities=28% Similarity=0.309 Sum_probs=26.3
Q ss_pred EEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceecc
Q 039280 341 IAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSN 390 (487)
Q Consensus 341 Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~ 390 (487)
|++.|.|.+. ++.+.+++++|+||+|.+.+..
T Consensus 119 i~l~H~p~~~------------------~~~~~~~~~~lsGH~H~~~~~~ 150 (171)
T cd07384 119 ILLTHIPLYR------------------LLDTIKPVLILSGHDHDQCEVV 150 (171)
T ss_pred eeEECCccHH------------------HHhccCceEEEeCcccCCeEEE
Confidence 8999999642 6677899999999999986663
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit |
| >cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.8e-07 Score=84.90 Aligned_cols=40 Identities=28% Similarity=0.460 Sum_probs=30.0
Q ss_pred HHHHHHHHcCCcEEEeCccccceecccccCCccCCCCcEEEEeCCccc
Q 039280 365 EMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDGGN 412 (487)
Q Consensus 365 ~l~~l~~~~~VdlvlsGH~H~yeR~~p~~~~~~~~~g~vyIv~G~gG~ 412 (487)
.+..++++.++|++++||+|...... .+|.++|..|+.|.
T Consensus 97 ~~~~~~~~~~~dvii~GHTH~p~~~~--------~~g~~viNPGSv~~ 136 (178)
T cd07394 97 SLAALQRQLDVDILISGHTHKFEAFE--------HEGKFFINPGSATG 136 (178)
T ss_pred HHHHHHHhcCCCEEEECCCCcceEEE--------ECCEEEEECCCCCC
Confidence 34455667889999999999765431 35788899999875
|
Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl |
| >cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.69 E-value=8.1e-08 Score=91.12 Aligned_cols=198 Identities=15% Similarity=0.179 Sum_probs=99.9
Q ss_pred EEEecCCCCCChH---HHHHHHHH----cCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhh
Q 039280 176 AVVGDLGLTYNTT---TTVAHLMS----NHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYM 248 (487)
Q Consensus 176 ~v~gD~~~~~~~~---~~l~~l~~----~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~ 248 (487)
++++|+|.+.... ..+..+.+ .+++.++++||+.. .+..... .... .....+...+
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d--~~~~~~~------------~~~~---~~~~~~~~l~ 63 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFD--LWFGDDE------------VVPP---AAHEVLAALL 63 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEE--EEecCCC------------CCCh---HHHHHHHHHH
Confidence 4789999875432 22333333 48999999999994 2211000 0000 1111123334
Q ss_pred hccccCCCEEEecCCcccccCccchhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCcccCCCChHHHHHHHHH
Q 039280 249 QPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYIDYDKSSDQYKWLESD 328 (487)
Q Consensus 249 ~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~ 328 (487)
+.+....+++.++||||.... ..+........ .......+.+++.+++++-... ++.....+.|+...
T Consensus 64 ~~~~~~~~v~~v~GNHD~~~~------~~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~HG~~-~d~~~~~~~~~~~~ 131 (217)
T cd07398 64 RLADRGTRVYYVPGNHDFLLG------DFFAEELGLIL-----LPDPLVHLELDGKRILLEHGDQ-FDTDDRAYQLLRRL 131 (217)
T ss_pred HHHHCCCeEEEECCCchHHHH------hHHHHHcCCEE-----eccceEEEeeCCeEEEEECCCc-CchhHHHHHHHHHH
Confidence 444568899999999998521 11111111100 0111215778888888887643 23344555555554
Q ss_pred hcccCC------CCCCeEEEEcCCCcccc----C--CCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceecccccCCc
Q 039280 329 LGDVDR------EVTPWLIAAWHPPWYST----Y--SAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYS 396 (487)
Q Consensus 329 L~~~~r------~~~~w~Iv~~H~P~y~~----~--~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~p~~~~~ 396 (487)
+..... ....|..-+.......+ . ...........+.+..++.+++++++++||+|......
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~------ 205 (217)
T cd07398 132 GRNPYDQLLFLNRPLNRRRGIAGGLRWSSRYLKKKVKKAVAIIDVFEEAVARLARRKGVDGVICGHTHRPALHE------ 205 (217)
T ss_pred hCcHHHHHHHhcchHHHHHHHHHhhhhhhHHHHhCccchHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCCeEE------
Confidence 332100 00000000000000000 0 00001122334566677888999999999999876542
Q ss_pred cCCCCcEEEEeCCc
Q 039280 397 LDPCGPVYILVGDG 410 (487)
Q Consensus 397 ~~~~g~vyIv~G~g 410 (487)
..+..|+.+|+.
T Consensus 206 --~~~~~~~n~G~W 217 (217)
T cd07398 206 --LDGKLYINLGDW 217 (217)
T ss_pred --ECCEEEEECCCC
Confidence 236788988873
|
YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l |
| >cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.9e-07 Score=90.95 Aligned_cols=193 Identities=18% Similarity=0.160 Sum_probs=98.9
Q ss_pred cEEEEEecCCCCC-------Ch---HHHHHHHHHcCCC-EEEEcCccccccccccCCCccccccccCCCCcccchhhHHH
Q 039280 173 NRIAVVGDLGLTY-------NT---TTTVAHLMSNHPD-LLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRW 241 (487)
Q Consensus 173 ~~f~v~gD~~~~~-------~~---~~~l~~l~~~~pd-fvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w 241 (487)
++|++++|+|... .. ...++++.+.++| +++.+||++....... + ...
T Consensus 1 l~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~--------------------~-~~~ 59 (252)
T cd00845 1 LTILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPST--------------------A-TKG 59 (252)
T ss_pred CEEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchh--------------------c-cCC
Confidence 4899999999653 12 3456666667788 7799999985321100 0 001
Q ss_pred HHHHHhhhccccCCCEEEecCCcccccCccchhhHHhhcccCCCC---C----C---CCCCCcceEEEEeCCEEE--EEE
Q 039280 242 DYWGRYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPS---E----E---SGSSSSLYYSFNAGGIHF--VML 309 (487)
Q Consensus 242 ~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~---~----~---~~~~~~~yYsf~~g~v~f--i~L 309 (487)
....+.+..+ -.-++++||||+.... +.+.........|. + . .......|.-++.+++++ +.+
T Consensus 60 ~~~~~~l~~~---g~d~~~~GNHe~d~g~--~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~ 134 (252)
T cd00845 60 EANIELMNAL---GYDAVTIGNHEFDYGL--DALAELYKDANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGL 134 (252)
T ss_pred cHHHHHHHhc---CCCEEeeccccccccH--HHHHHHHHhCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEe
Confidence 1122333322 2345778999986332 23333333333221 0 0 001123355678887554 444
Q ss_pred cCcccCC----------CChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEE
Q 039280 310 SAYIDYD----------KSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVF 379 (487)
Q Consensus 310 dt~~~~~----------~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~Vdlvl 379 (487)
.+..... ......+.+++..++. +.+...+|++.|.+... . ..+.+.+ .+||++|
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~vIvl~H~g~~~--------~----~~la~~~--~giDlvl 199 (252)
T cd00845 135 TTPDTPTYTPLGWIIGLPFEDLAEAVAVAEELL-AEGADVIILLSHLGLDD--------D----EELAEEV--PGIDVIL 199 (252)
T ss_pred ccccceeecCCCcccCceecCHHHHHHHHHHHH-hCCCCEEEEEeccCccc--------h----HHHHhcC--CCccEEE
Confidence 4321100 0012233343322221 23456799999987643 0 1111111 5899999
Q ss_pred eCccccceecccccCCccCCCCcEEEEeCCccc
Q 039280 380 NGHVHAYERSNRVYNYSLDPCGPVYILVGDGGN 412 (487)
Q Consensus 380 sGH~H~yeR~~p~~~~~~~~~g~vyIv~G~gG~ 412 (487)
+||.|....... .-++++.+-+|+=|.
T Consensus 200 ggH~H~~~~~~~------~~~~~~v~~~g~~~~ 226 (252)
T cd00845 200 GGHTHHLLEEPE------VVNGTLIVQAGKYGK 226 (252)
T ss_pred cCCcCcccCCCc------ccCCEEEEeCChhHc
Confidence 999998755311 124666676666554
|
This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich |
| >PRK09453 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=3.8e-07 Score=84.38 Aligned_cols=75 Identities=16% Similarity=0.317 Sum_probs=45.5
Q ss_pred cEEEEEecCCCCCCh-HHHHHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhhhcc
Q 039280 173 NRIAVVGDLGLTYNT-TTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYMQPL 251 (487)
Q Consensus 173 ~~f~v~gD~~~~~~~-~~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~~~l 251 (487)
||++++||+|..... .+.++.+.+.++|.|+++||++.. +.. ....+.|+ .++..+.++.+
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~------~~~----------~~~~~~~~--~~~~~~~l~~~ 62 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYH------GPR----------NPLPEGYA--PKKVAELLNAY 62 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEccccccc------CcC----------CCCccccC--HHHHHHHHHhc
Confidence 589999999965322 334455556789999999999842 100 00011111 12233333332
Q ss_pred ccCCCEEEecCCcccc
Q 039280 252 VSNVPTMVIEGEHEIE 267 (487)
Q Consensus 252 ~~~~P~~~v~GNHD~~ 267 (487)
..+++.+.||||..
T Consensus 63 --~~~v~~V~GNhD~~ 76 (182)
T PRK09453 63 --ADKIIAVRGNCDSE 76 (182)
T ss_pred --CCceEEEccCCcch
Confidence 46899999999963
|
|
| >cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.64 E-value=8.8e-07 Score=87.56 Aligned_cols=207 Identities=16% Similarity=0.122 Sum_probs=102.5
Q ss_pred cEEEEEecCCCCCC-----------------hHHHHHHHHHcCCCEEEE-cCccccccccccCCCccccccccCCCCccc
Q 039280 173 NRIAVVGDLGLTYN-----------------TTTTVAHLMSNHPDLLLL-IGDLSYADLYLTNGTKSSCYLCQSIESPIQ 234 (487)
Q Consensus 173 ~~f~v~gD~~~~~~-----------------~~~~l~~l~~~~pdfvl~-~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~ 234 (487)
++|++++|+|.... ....++++.+.+++.+++ +||+........- . . ..
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~-~-----~-------~~ 67 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADY-Y-----A-------KI 67 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHH-h-----h-------hc
Confidence 47888888886521 123455566667887776 9999853211000 0 0 00
Q ss_pred chhhHHHHHHHHhhhccccCCCEEEecCCcccccCccchhhHHhhcccCCCC---C----C-CCCCCcceEEEEeC-CEE
Q 039280 235 ETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPS---E----E-SGSSSSLYYSFNAG-GIH 305 (487)
Q Consensus 235 ~~y~~~w~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~---~----~-~~~~~~~yYsf~~g-~v~ 305 (487)
+ ........+.++.+ .. -+.++||||+... ...+........+|. | . .......|.-++.+ +++
T Consensus 68 ~--~~~~~~~~~~ln~~--g~-d~~~lGNHe~d~g--~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g~k 140 (277)
T cd07410 68 E--DGDPHPMIAAMNAL--GY-DAGTLGNHEFNYG--LDYLDKVIKQANFPVLSANVIDADTGEPFLKPYVILERDVGVK 140 (277)
T ss_pred c--cCCCChHHHHHHhc--CC-CEEeecccCcccC--HHHHHHHHHhCCCCEEEEEEEeCCCCCcccCCEEEEEecCCCE
Confidence 0 00001123334433 23 3667899998632 233333333333331 0 0 01122346667888 866
Q ss_pred EEEEc--Cccc--C-----------CCChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHH
Q 039280 306 FVMLS--AYID--Y-----------DKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLL 370 (487)
Q Consensus 306 fi~Ld--t~~~--~-----------~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~ 370 (487)
+-++. +... + ....+..++..++|++ .+...+|+++|........... . .+.....|.
T Consensus 141 VgviG~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~---~~~D~IIvl~H~g~~~~~~~~~-~---~~~~~~~la 213 (277)
T cd07410 141 VGIIGLTTPQIPNWEKPNLIGGLKFTDPVETAKKYVPKLRA---EGADVVVVLAHGGFERDLEESL-T---GENAAYELA 213 (277)
T ss_pred EEEEecCCcccccccCcccCCCcEEcCHHHHHHHHHHHHHH---cCCCEEEEEecCCcCCCccccc-C---CccHHHHHH
Confidence 55544 3210 0 0012234555555554 3456799999988654321000 0 011222344
Q ss_pred HH-cCCcEEEeCccccceecccccCCccCCCCcEEEEeCCcccc
Q 039280 371 YY-YGVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDGGNV 413 (487)
Q Consensus 371 ~~-~~VdlvlsGH~H~yeR~~p~~~~~~~~~g~vyIv~G~gG~~ 413 (487)
++ .+||++|+||.|...... ..+++..+-+|+-|..
T Consensus 214 ~~~~~vD~IlgGHsH~~~~~~-------~~~~~~v~q~g~~g~~ 250 (277)
T cd07410 214 EEVPGIDAILTGHQHRRFPGP-------TVNGVPVVQPGNWGSH 250 (277)
T ss_pred hcCCCCcEEEeCCCccccccC-------CcCCEEEEcCChhhCE
Confidence 44 589999999999754321 1245555655655553
|
CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos |
| >cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.63 E-value=9.5e-08 Score=88.29 Aligned_cols=31 Identities=23% Similarity=0.295 Sum_probs=24.5
Q ss_pred EEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceec
Q 039280 341 IAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERS 389 (487)
Q Consensus 341 Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~ 389 (487)
|++.|.|.+. +..+.+++++||||+|.-++.
T Consensus 129 ilL~H~P~~~------------------~~~~~~~dl~lSGHtHgGqi~ 159 (193)
T cd08164 129 ILLTHVPLYK------------------IFLEGKPGLILTGHDHEGCDY 159 (193)
T ss_pred EEEEccccee------------------ccccCCCCEEEeCccCCCeEE
Confidence 8899999764 223358899999999998776
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the |
| >cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.58 E-value=8e-07 Score=86.89 Aligned_cols=194 Identities=16% Similarity=0.125 Sum_probs=99.6
Q ss_pred cEEEEEecCCCCC--------C---hHHHHHHHHHcCCC-EEEEcCccccccccccCCCccccccccCCCCcccchhhHH
Q 039280 173 NRIAVVGDLGLTY--------N---TTTTVAHLMSNHPD-LLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPR 240 (487)
Q Consensus 173 ~~f~v~gD~~~~~--------~---~~~~l~~l~~~~pd-fvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~ 240 (487)
++|+.+.|+|.-. . ....++++.+.+++ +++.+||+........ + .+
T Consensus 1 ~~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~--------------------~-~~ 59 (257)
T cd07406 1 FTILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLST--------------------A-TK 59 (257)
T ss_pred CeEEEEccceeecccCCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchh--------------------h-cC
Confidence 4677788877311 1 12345566666788 8999999984321100 0 00
Q ss_pred HHHHHHhhhccccCCCEEEecCCcccccCccchhhHHhhcccCCCC---C----CC---CCCCcceEEEEeCCEEE--EE
Q 039280 241 WDYWGRYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPS---E----ES---GSSSSLYYSFNAGGIHF--VM 308 (487)
Q Consensus 241 w~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~---~----~~---~~~~~~yYsf~~g~v~f--i~ 308 (487)
.+...+.++.+ . .-+.++||||+... ...+........+|. | .. -..-+.|.-++.+++++ |.
T Consensus 60 g~~~~~~l~~l--~-~d~~~~GNHefd~g--~~~l~~~~~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG 134 (257)
T cd07406 60 GKQMVPVLNAL--G-VDLACFGNHEFDFG--EDQLQKRLGESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLG 134 (257)
T ss_pred CccHHHHHHhc--C-CcEEeecccccccC--HHHHHHHHhhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEE
Confidence 11222333333 2 23668999998532 233333333322221 0 00 01124577788888655 44
Q ss_pred EcCcccC------C---CChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHH-cCCcEE
Q 039280 309 LSAYIDY------D---KSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYY-YGVDIV 378 (487)
Q Consensus 309 Ldt~~~~------~---~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~-~~Vdlv 378 (487)
+.+.... . ...+-.+.+++.+++..+.+..-+|++.|.+... .. ++.++ .+||++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~~~~~~~D~iVvl~H~g~~~--------d~-------~la~~~~~iD~I 199 (257)
T cd07406 135 LVEEEWLETLTIDPEYVRYRDYVETARELVDELREQGADLIIALTHMRLPN--------DK-------RLAREVPEIDLI 199 (257)
T ss_pred EecccccccccCCCCcceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh--------hH-------HHHHhCCCCceE
Confidence 4432110 0 0112233344433222224566799999987531 11 22223 479999
Q ss_pred EeCccccceecccccCCccCCCCcEEEEeCCccccCC
Q 039280 379 FNGHVHAYERSNRVYNYSLDPCGPVYILVGDGGNVEG 415 (487)
Q Consensus 379 lsGH~H~yeR~~p~~~~~~~~~g~vyIv~G~gG~~~~ 415 (487)
|+||.|..... ..++++.+-+|+-|..-+
T Consensus 200 lgGH~H~~~~~--------~~~~t~vv~~g~~g~~vg 228 (257)
T cd07406 200 LGGHDHEYILV--------QVGGTPIVKSGSDFRTVY 228 (257)
T ss_pred EecccceeEee--------eECCEEEEeCCcCcceEE
Confidence 99999987622 124666677777766443
|
CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th |
| >TIGR00583 mre11 DNA repair protein (mre11) | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.1e-06 Score=90.87 Aligned_cols=40 Identities=28% Similarity=0.310 Sum_probs=30.1
Q ss_pred CcEEEEEecCCCCCC---------h----HHHHHHHHHcCCCEEEEcCccccc
Q 039280 172 PNRIAVVGDLGLTYN---------T----TTTVAHLMSNHPDLLLLIGDLSYA 211 (487)
Q Consensus 172 ~~~f~v~gD~~~~~~---------~----~~~l~~l~~~~pdfvl~~GDl~y~ 211 (487)
.+||++++|+|.+.. . .++++.+.+.++|+||++||+...
T Consensus 3 ~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~ 55 (405)
T TIGR00583 3 TIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHE 55 (405)
T ss_pred ceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCC
Confidence 589999999998742 1 223444456799999999999954
|
All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria. |
| >cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.46 E-value=5.3e-06 Score=80.98 Aligned_cols=188 Identities=21% Similarity=0.245 Sum_probs=99.5
Q ss_pred EEEEecCCCCCChHHHHH---HHHH---cCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhh
Q 039280 175 IAVVGDLGLTYNTTTTVA---HLMS---NHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYM 248 (487)
Q Consensus 175 f~v~gD~~~~~~~~~~l~---~l~~---~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~ 248 (487)
|+|.||.|.. .....+ .+.+ .++|++|++||+.-. . +....++ -.+...| ..+..|.+.+
T Consensus 1 i~v~Gd~HG~--~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~--~--~~~d~~~-------~~~p~k~-~~~~~f~~~~ 66 (262)
T cd00844 1 IAVEGCCHGE--LDKIYETLEKIEKKEGTKVDLLICCGDFQAV--R--NEADLKC-------MAVPPKY-RKMGDFYKYY 66 (262)
T ss_pred CEEEecCCcc--HHHHHHHHHHHHHhcCCCCcEEEEcCCCCCc--C--Ccchhhh-------hccchhh-hhhhhHHHHh
Confidence 5799999974 333333 3332 369999999999631 1 0110000 0011112 1234455554
Q ss_pred hcc-ccCCCEEEecCCcccccCccchhhHHhhcccCCCCCCCCCCCcceE-----EEEeCCEEEEEEcCccc---CC---
Q 039280 249 QPL-VSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYY-----SFNAGGIHFVMLSAYID---YD--- 316 (487)
Q Consensus 249 ~~l-~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yY-----sf~~g~v~fi~Ldt~~~---~~--- 316 (487)
+.. ...+|++++.||||... .+. . ++..+ ....+.+| .++++|++|..|..... +.
T Consensus 67 ~g~~~~p~~t~fi~GNHE~~~-----~l~----~--l~~gg-~v~~Ni~~Lg~~~v~~~~GlrIaGLsG~~~~~~~~~~~ 134 (262)
T cd00844 67 SGEKKAPILTIFIGGNHEASN-----YLW----E--LPYGG-WVAPNIYYLGYAGVVNFGGLRIAGLSGIYKSHDYRKGH 134 (262)
T ss_pred cCCccCCeeEEEECCCCCCHH-----HHH----h--hcCCC-eecCcEEEecCCCEEEECCeEEEEeccccccccccccc
Confidence 443 35778899999999631 111 1 11110 00123332 46678999999986321 11
Q ss_pred -----CChHHHHHH-------HHHhcccCCCCCCeEEEEcCCCccccCCCCcch------------h---HHHHHHHHHH
Q 039280 317 -----KSSDQYKWL-------ESDLGDVDREVTPWLIAAWHPPWYSTYSAHYRE------------V---ECMRVEMEDL 369 (487)
Q Consensus 317 -----~~~~Q~~WL-------~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~------------~---~~~r~~l~~l 369 (487)
..+.++..+ .+.|.... .. --|+++|.|+.......... . ..-...+..+
T Consensus 135 ~~~~~~t~~~~rs~y~~r~~~~~kl~~~~-~~--vDIlLSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~l 211 (262)
T cd00844 135 FERPPYSEDTKRSAYHVRNIEVFKLKQLK-QP--IDIFLSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEEL 211 (262)
T ss_pred ccCCCCCHHHHHHhhhhhHHHHHHHHhcC-CC--CcEEEeCCCCcchhhccchHHhhhcCccchhcccccCCCCHHHHHH
Confidence 122333221 11122211 12 25999999987643211000 0 0113467789
Q ss_pred HHHcCCcEEEeCcccc-ceeccc
Q 039280 370 LYYYGVDIVFNGHVHA-YERSNR 391 (487)
Q Consensus 370 ~~~~~VdlvlsGH~H~-yeR~~p 391 (487)
+++.+....|+||.|. |++..|
T Consensus 212 l~~lkPryhf~gH~H~~f~~~~~ 234 (262)
T cd00844 212 LKHLKPRYWFSAHLHVKFAALVP 234 (262)
T ss_pred HHHhCCCEEEEecCCcccceecC
Confidence 9999999999999998 666644
|
Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s |
| >COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.1e-06 Score=91.20 Aligned_cols=74 Identities=19% Similarity=0.241 Sum_probs=50.1
Q ss_pred cEEEEEecCCCCC-C-------------hHHHHHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhh
Q 039280 173 NRIAVVGDLGLTY-N-------------TTTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQ 238 (487)
Q Consensus 173 ~~f~v~gD~~~~~-~-------------~~~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~ 238 (487)
|||++.+|+|.+. . ....++.+.+.++||||++||+...... +.
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~P-----------------s~----- 58 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNP-----------------SP----- 58 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCC-----------------CH-----
Confidence 6999999999982 1 1234555567899999999999953211 00
Q ss_pred HHHHHHHHhhhcc-ccCCCEEEecCCccccc
Q 039280 239 PRWDYWGRYMQPL-VSNVPTMVIEGEHEIER 268 (487)
Q Consensus 239 ~~w~~~~~~~~~l-~~~~P~~~v~GNHD~~~ 268 (487)
..-..+.+.++.+ ..++|++++.||||...
T Consensus 59 ~a~~~~~~~l~~l~~~~Ipv~~I~GNHD~~~ 89 (390)
T COG0420 59 RALKLFLEALRRLKDAGIPVVVIAGNHDSPS 89 (390)
T ss_pred HHHHHHHHHHHHhccCCCcEEEecCCCCchh
Confidence 1112344555555 35899999999999853
|
|
| >cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.41 E-value=3.9e-06 Score=82.35 Aligned_cols=178 Identities=15% Similarity=0.136 Sum_probs=88.9
Q ss_pred HHHHHHHHc-CCCEE-EEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhhhccccCCCEEEecCCccc
Q 039280 189 TTVAHLMSN-HPDLL-LLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEI 266 (487)
Q Consensus 189 ~~l~~l~~~-~pdfv-l~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~~~l~~~~P~~~v~GNHD~ 266 (487)
..++++.+. .+|.+ +.+||+....... .........+.+.. +++.++.||||+
T Consensus 40 ~~v~~~~~~~~~~~l~l~~GD~~~gs~~~---------------------~~~~g~~~~~~l~~----~g~da~~GNHef 94 (264)
T cd07411 40 TLIKRIRAERNPNTLLLDGGDTWQGSGEA---------------------LYTRGQAMVDALNA----LGVDAMVGHWEF 94 (264)
T ss_pred HHHHHHHHhcCCCeEEEeCCCccCCChHH---------------------hhcCChhHHHHHHh----hCCeEEeccccc
Confidence 345566666 89977 5799999532110 00111122233332 455555599998
Q ss_pred ccCccchhhHHhhcccCCCCCCC-------C-CCCcceEEEEeCCEE--EEEEcCcccCC--C--------ChHHHHHHH
Q 039280 267 ERQAENQTFAAYSSRFAFPSEES-------G-SSSSLYYSFNAGGIH--FVMLSAYIDYD--K--------SSDQYKWLE 326 (487)
Q Consensus 267 ~~~~~~~~~~~y~~~f~~P~~~~-------~-~~~~~yYsf~~g~v~--fi~Ldt~~~~~--~--------~~~Q~~WL~ 326 (487)
... ...+....+.+.+|.-.. + ..-..|.-++.++++ ||.+.+..... . .....+.++
T Consensus 95 d~g--~~~l~~~~~~~~~~~l~aN~~~~~~~~~~~~~~~i~~~~g~kVgviG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (264)
T cd07411 95 TYG--PERVRELFGRLNWPFLAANVYDDEAGERVFPPYRIKEVGGVKIGVIGQTFPYVPIANPPRFTPGLTFGIREEELQ 172 (264)
T ss_pred ccC--HHHHHHHHhhCCCCEEEEEEEeCCCCCcccCCEEEEEECCEEEEEEEeccCCcccccCcCCCCCcEECCHHHHHH
Confidence 632 233344444443332000 0 111235566888755 55555421100 0 122344444
Q ss_pred HHhccc-CCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHH-cCCcEEEeCccccceecccccCCccCCCCcEE
Q 039280 327 SDLGDV-DREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYY-YGVDIVFNGHVHAYERSNRVYNYSLDPCGPVY 404 (487)
Q Consensus 327 ~~L~~~-~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~-~~VdlvlsGH~H~yeR~~p~~~~~~~~~g~vy 404 (487)
+.+++. +..+...+|++.|-+... .. .+.++ .+||++|+||.|..... |+ ..-++++.
T Consensus 173 ~~~~~~~~~~~~D~iI~l~H~g~~~--------~~-------~la~~~~~iDlilgGH~H~~~~~-~~----~~~~~t~v 232 (264)
T cd07411 173 EVVVKLRREEGVDVVVLLSHNGLPV--------DV-------ELAERVPGIDVILSGHTHERTPK-PI----IAGGGTLV 232 (264)
T ss_pred HHHHHHHHhCCCCEEEEEecCCchh--------hH-------HHHhcCCCCcEEEeCcccccccC-cc----cccCCEEE
Confidence 443322 113456799999987532 11 12222 47999999999975332 21 11256676
Q ss_pred EEeCCcccc
Q 039280 405 ILVGDGGNV 413 (487)
Q Consensus 405 Iv~G~gG~~ 413 (487)
+-+|.-|..
T Consensus 233 ~~~g~~~~~ 241 (264)
T cd07411 233 VEAGSHGKF 241 (264)
T ss_pred EEcCccccE
Confidence 777776654
|
SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy |
| >COG2908 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.3e-06 Score=82.28 Aligned_cols=192 Identities=19% Similarity=0.264 Sum_probs=101.1
Q ss_pred EEecCCCCCChHH---HHHH-HHHc--CCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhhhc
Q 039280 177 VVGDLGLTYNTTT---TVAH-LMSN--HPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYMQP 250 (487)
Q Consensus 177 v~gD~~~~~~~~~---~l~~-l~~~--~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~~~ 250 (487)
+++|+|.+..... .+.. |... +.|.++++||++ +.|. |.. .+.+.-++....+..
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~~~a~~ad~lyilGDif--d~w~--g~~---------------~~~~~~~~V~~~l~~ 62 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLREEAAQADALYILGDIF--DGWI--GDD---------------EPPQLHRQVAQKLLR 62 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHHhccccCcEEEEechhh--hhhh--cCC---------------cccHHHHHHHHHHHH
Confidence 6899999854332 2323 3333 459999999999 3442 210 011112223333333
Q ss_pred c-ccCCCEEEecCCcccccCccchhhHHhhcccC-CCCCCCCCCCcceEEEEeCCEEEEEEcCcccCCCChHHHHHHHHH
Q 039280 251 L-VSNVPTMVIEGEHEIERQAENQTFAAYSSRFA-FPSEESGSSSSLYYSFNAGGIHFVMLSAYIDYDKSSDQYKWLESD 328 (487)
Q Consensus 251 l-~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~-~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~ 328 (487)
+ ...+|++.+.||||+.- ...+...+. +- ..+.+--+++-|-+++++-.-. +.....++.|+...
T Consensus 63 ~a~~G~~v~~i~GN~Dfll------~~~f~~~~g~~~------l~~~~~~~~l~g~~~Ll~HGD~-f~t~~~~y~~~r~~ 129 (237)
T COG2908 63 LARKGTRVYYIHGNHDFLL------GKRFAQEAGGMT------LLPDPIVLDLYGKRILLAHGDT-FCTDDRAYQWFRYK 129 (237)
T ss_pred HHhcCCeEEEecCchHHHH------HHHHHhhcCceE------EcCcceeeeecCcEEEEEeCCc-ccchHHHHHHHHHH
Confidence 4 45699999999999741 112222222 10 1112223444555566654421 22345666666554
Q ss_pred hcccCCCCCCeE-EEEcCCCcc---------ccCCCCc----ch----hHHHHHHHHHHHHHcCCcEEEeCccccceecc
Q 039280 329 LGDVDREVTPWL-IAAWHPPWY---------STYSAHY----RE----VECMRVEMEDLLYYYGVDIVFNGHVHAYERSN 390 (487)
Q Consensus 329 L~~~~r~~~~w~-Iv~~H~P~y---------~~~~~~~----~~----~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~ 390 (487)
... +|. .++.+.|.. -+.+... .. .+...+...+.+++++||.+++||+|.-.-.
T Consensus 130 ~~~------~~~~~lflnl~l~~R~ri~~k~r~~s~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~- 202 (237)
T COG2908 130 VHW------AWLQLLFLNLPLRVRRRIAYKIRSLSSWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIH- 202 (237)
T ss_pred ccc------HHHHHHHHHhHHHHHHHHHHHHHHhhHHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhc-
Confidence 333 121 122233321 0000000 00 1122455667889999999999999976544
Q ss_pred cccCCccCCCCcEEEEeCCccccCC
Q 039280 391 RVYNYSLDPCGPVYILVGDGGNVEG 415 (487)
Q Consensus 391 p~~~~~~~~~g~vyIv~G~gG~~~~ 415 (487)
+-.+..||+.|+.. .++
T Consensus 203 -------~i~~~~yi~lGdW~-~~~ 219 (237)
T COG2908 203 -------NIPGITYINLGDWV-SEG 219 (237)
T ss_pred -------cCCCceEEecCcch-hcc
Confidence 34569999999998 444
|
|
| >cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.35 E-value=5.8e-06 Score=80.83 Aligned_cols=201 Identities=17% Similarity=0.149 Sum_probs=96.6
Q ss_pred cEEEEEecCCCCCC--------h---HHHHHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHH
Q 039280 173 NRIAVVGDLGLTYN--------T---TTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRW 241 (487)
Q Consensus 173 ~~f~v~gD~~~~~~--------~---~~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w 241 (487)
++|+.++|+|.... . ...++++.+....+++.+||+...... .+ ....
T Consensus 1 i~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~-~~--------------------~~~g 59 (257)
T cd07408 1 ITILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPI-SD--------------------LDKG 59 (257)
T ss_pred CEEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchh-hh--------------------hcCC
Confidence 47899999997421 1 223444443456899999999843110 00 0001
Q ss_pred HHHHHhhhccccCCCEEEecCCcccccCccchhhHHhhcccCCCCCCC-------CC-CCcceEEEEeC-CE--EEEEEc
Q 039280 242 DYWGRYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEES-------GS-SSSLYYSFNAG-GI--HFVMLS 310 (487)
Q Consensus 242 ~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~-------~~-~~~~yYsf~~g-~v--~fi~Ld 310 (487)
....+.|..+ ..-+ .++||||+.. +.+.+..+...+.+|.-.. +. .-..|.-++.+ ++ -||.+-
T Consensus 60 ~~~~~~ln~~--g~d~-~~~GNHefd~--G~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~py~i~~~~~G~kIgviG~~ 134 (257)
T cd07408 60 ETIIKIMNAV--GYDA-VTPGNHEFDY--GLDRLKELSKEADFPFLSANVYDNDTGKRVFKPYKIKELGNGVKVGVIGLT 134 (257)
T ss_pred cHHHHHHHhc--CCcE-EccccccccC--CHHHHHHHHhhCCCCEEEEEEEEcCCCCcccCCEEEEEcCCCCEEEEEeec
Confidence 1222333332 3334 5689999863 2334444444444432100 00 11224455777 64 455554
Q ss_pred Cccc-C-C-C-------ChHHHHHHHHH-hcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEE
Q 039280 311 AYID-Y-D-K-------SSDQYKWLESD-LGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVF 379 (487)
Q Consensus 311 t~~~-~-~-~-------~~~Q~~WL~~~-L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~Vdlvl 379 (487)
+... . . . ..+-.+-+++. ..+..+.+..-+|++.|.+....... . . ...+.. .-.+||++|
T Consensus 135 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~~~~D~iIvl~H~G~~~~~~~-~-~----~~~la~--~~~giDvIi 206 (257)
T cd07408 135 TPETATKTHPKNVKDVTFEDPIEEAKKVIVAALKAKGADVIVALGHLGVDRTSSP-W-T----STELAA--NVTGIDLII 206 (257)
T ss_pred CcCcccccCccccCCcEEecHHHHHHHHHHHHHHhCCCCEEEEEeCcCcCCCCCC-c-c----HHHHHH--hCCCceEEE
Confidence 4210 0 0 0 01112223332 11111235667999999887543211 1 1 112211 124799999
Q ss_pred eCccccceecccccCCccCCCCcEEEEeCCccc
Q 039280 380 NGHVHAYERSNRVYNYSLDPCGPVYILVGDGGN 412 (487)
Q Consensus 380 sGH~H~yeR~~p~~~~~~~~~g~vyIv~G~gG~ 412 (487)
.||.|....... ..-++++.+-+|.-|.
T Consensus 207 gGH~H~~~~~~~-----~~~~~~~ivq~g~~g~ 234 (257)
T cd07408 207 DGHSHTTIEIGK-----KDGNNVLLTQTGAYLA 234 (257)
T ss_pred eCCCcccccCcc-----cccCCeEEEcCChHHc
Confidence 999998654421 0123555555555444
|
SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet |
| >cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.2e-05 Score=80.05 Aligned_cols=86 Identities=14% Similarity=0.108 Sum_probs=46.5
Q ss_pred HHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHH--cCCcEEEeCccccceecccccCCccCCC
Q 039280 323 KWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYY--YGVDIVFNGHVHAYERSNRVYNYSLDPC 400 (487)
Q Consensus 323 ~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~--~~VdlvlsGH~H~yeR~~p~~~~~~~~~ 400 (487)
+-+++.+++.+..+...+|++.|........... .+........++.+ .+||++|+||+|..... +. ...+
T Consensus 178 e~~~~~v~~lr~~~~D~IIvL~H~G~~~~~~~~~--~~~~~~~~~~l~~~~~~~iD~IlgGHsH~~~~~-~~----~~~~ 250 (288)
T cd07412 178 EAINAVAPELKAGGVDAIVVLAHEGGSTKGGDDT--CSAASGPIADIVNRLDPDVDVVFAGHTHQAYNC-TV----PAGN 250 (288)
T ss_pred HHHHHHHHHHHHCCCCEEEEEeCCCCCCCCCCcc--ccccChhHHHHHhhcCCCCCEEEeCccCccccc-cc----cCcC
Confidence 3344443333223466799999977653221100 00011122334444 37999999999987543 11 1235
Q ss_pred CcEEEEeCCccccCC
Q 039280 401 GPVYILVGDGGNVEG 415 (487)
Q Consensus 401 g~vyIv~G~gG~~~~ 415 (487)
+++.+-+|+-|..-+
T Consensus 251 ~~~v~q~g~~g~~vg 265 (288)
T cd07412 251 PRLVTQAGSYGKAVA 265 (288)
T ss_pred CEEEEecChhhceeE
Confidence 677788887777544
|
YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi |
| >COG0622 Predicted phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.23 E-value=2.1e-05 Score=71.73 Aligned_cols=38 Identities=16% Similarity=0.179 Sum_probs=29.0
Q ss_pred cEEEEEecCCCCCCh-HHHHHHHHHcCCCEEEEcCcccc
Q 039280 173 NRIAVVGDLGLTYNT-TTTVAHLMSNHPDLLLLIGDLSY 210 (487)
Q Consensus 173 ~~f~v~gD~~~~~~~-~~~l~~l~~~~pdfvl~~GDl~y 210 (487)
++|+++||+|..... ...++.....++|+|||+||.+.
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~ 40 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTS 40 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCC
Confidence 689999999987532 23334444579999999999995
|
|
| >cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.22 E-value=4.2e-05 Score=74.31 Aligned_cols=190 Identities=15% Similarity=0.224 Sum_probs=99.3
Q ss_pred EEEEEecCCCCCChH---HHHHHHHH-cCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhhh
Q 039280 174 RIAVVGDLGLTYNTT---TTVAHLMS-NHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYMQ 249 (487)
Q Consensus 174 ~f~v~gD~~~~~~~~---~~l~~l~~-~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~~ 249 (487)
||+++||+=...... ..+.++.+ .++||++..||.+-. |.. + . ....+.|.
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~g------g~g------------l----~---~~~~~~L~ 55 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAG------GKG------------I----T---PKIAKELL 55 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccC------CCC------------C----C---HHHHHHHH
Confidence 588999986554433 33455543 479999999999842 110 0 0 11122333
Q ss_pred ccccCCCEEEecCCcccccCccchhhHHhhcccC---CCCCCC-CCCCcceEEEEeCCEEEEEEcC--cccCCCChHHHH
Q 039280 250 PLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFA---FPSEES-GSSSSLYYSFNAGGIHFVMLSA--YIDYDKSSDQYK 323 (487)
Q Consensus 250 ~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~---~P~~~~-~~~~~~yYsf~~g~v~fi~Ldt--~~~~~~~~~Q~~ 323 (487)
.+ .+- +++.|||++... ....+.+... .|.+-+ ......|.-++.+++++-+++- .........-++
T Consensus 56 ~~--G~D-~iTlGNH~fD~g----el~~~l~~~~~~l~~aN~~~~~pg~~~~i~~~~G~kIaVigl~g~~~~~~~~~P~~ 128 (255)
T cd07382 56 SA--GVD-VITMGNHTWDKK----EILDFIDEEPRLLRPANYPPGTPGRGYGVVEVNGKKIAVINLMGRVFMPPLDNPFR 128 (255)
T ss_pred hc--CCC-EEEecccccCcc----hHHHHHhcCcCceEeeecCCCCCCCCeEEEEECCEEEEEEEEecccCCCcCCCHHH
Confidence 22 233 456699999743 2333333221 222211 1123457778888876555542 211111122233
Q ss_pred HHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceecccccCCccCCCCcE
Q 039280 324 WLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPV 403 (487)
Q Consensus 324 WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~p~~~~~~~~~g~v 403 (487)
-+++.+++.+. ....+||.+|.-.. .+ +..+.. .-.-+||+++.||+|...-- ..+-|+|+.
T Consensus 129 ~~~~~v~~lk~-~~D~IIV~~H~g~t-------sE----k~ala~-~ldg~VdvIvGtHTHv~t~d-----~~il~~gTa 190 (255)
T cd07382 129 AADELLEELKE-EADIIFVDFHAEAT-------SE----KIALGW-YLDGRVSAVVGTHTHVQTAD-----ERILPGGTA 190 (255)
T ss_pred HHHHHHHHHhc-CCCEEEEEECCCCC-------HH----HHHHHH-hCCCCceEEEeCCCCccCCc-----cEEeeCCeE
Confidence 35555554432 45679999996421 11 122222 11335999999999975322 222368888
Q ss_pred EEEe-CCcccc
Q 039280 404 YILV-GDGGNV 413 (487)
Q Consensus 404 yIv~-G~gG~~ 413 (487)
||+. |.-|..
T Consensus 191 ~itd~Gm~G~~ 201 (255)
T cd07382 191 YITDVGMTGPY 201 (255)
T ss_pred EEecCccccCC
Confidence 8763 444443
|
DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >PRK04036 DNA polymerase II small subunit; Validated | Back alignment and domain information |
|---|
Probab=98.21 E-value=1.1e-05 Score=86.25 Aligned_cols=204 Identities=18% Similarity=0.195 Sum_probs=103.4
Q ss_pred CCcEEEEEecCCCCCCh------HHHHHHHH---------HcCCCEEEEcCccccccccccCCCccccccccCCCCcccc
Q 039280 171 YPNRIAVVGDLGLTYNT------TTTVAHLM---------SNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQE 235 (487)
Q Consensus 171 ~~~~f~v~gD~~~~~~~------~~~l~~l~---------~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~ 235 (487)
..+++++++|+|.+... ...++.+. ..+++.++++||++...+... +... .....+
T Consensus 242 ~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p-~~~~--------~~~~~~ 312 (504)
T PRK04036 242 EKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYP-GQEE--------ELEIVD 312 (504)
T ss_pred CccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCc-cchh--------hccchh
Confidence 36899999999977531 22344444 457999999999995311000 0000 000001
Q ss_pred hhhHHHHHHHHhhhccccCCCEEEecCCcccccCccc-h-hhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCcc
Q 039280 236 TYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIERQAEN-Q-TFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYI 313 (487)
Q Consensus 236 ~y~~~w~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~-~-~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~ 313 (487)
.+ .+.+.+.+.++.+...+|+++++||||....... . -...+...+... ......+ -+.+++++.++++.....
T Consensus 313 ~~-~~~~~l~~~L~~L~~~i~V~~ipGNHD~~~~~lPQ~~l~~~l~~~l~~~--~v~~lsN-P~~i~l~G~~iLl~HG~~ 388 (504)
T PRK04036 313 IY-EQYEAAAEYLKQIPEDIKIIISPGNHDAVRQAEPQPAFPEEIRSLFPEH--NVTFVSN-PALVNLHGVDVLIYHGRS 388 (504)
T ss_pred hH-HHHHHHHHHHHhhhcCCeEEEecCCCcchhhccCCCCccHHHHHhcCcC--CeEEecC-CeEEEECCEEEEEECCCC
Confidence 11 1234555667777778999999999997532111 0 011222222110 0001112 235788888888776432
Q ss_pred -----cC---CCChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCcccc
Q 039280 314 -----DY---DKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHA 385 (487)
Q Consensus 314 -----~~---~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~ 385 (487)
.+ .....-...|++.|+.. .-+| ..-.+.|.+...... | ++++ -.|++++||.|.
T Consensus 389 idDl~~~i~~~s~~~p~~~m~~~l~~r--HlaP--t~p~~~~~~p~~~D~----------l--vi~~-~Pdv~~~GH~H~ 451 (504)
T PRK04036 389 IDDVISLIPGASYEKPGKAMEELLKRR--HLAP--IYGGRTPIAPEKEDY----------L--VIDE-VPDIFHTGHVHI 451 (504)
T ss_pred HHHHHhhcccccccCHHHHHHHHHHhc--ccCC--CCCCCEEeCcCCCCC----------E--EEec-CCCEEEeCCCCc
Confidence 01 01123345666666542 1111 000122222211100 0 1112 359999999999
Q ss_pred ceecccccCCccCCCCcEEEEeCCccc
Q 039280 386 YERSNRVYNYSLDPCGPVYILVGDGGN 412 (487)
Q Consensus 386 yeR~~p~~~~~~~~~g~vyIv~G~gG~ 412 (487)
+.... -.|+.+|..|+.-.
T Consensus 452 ~~~~~--------~~g~~~IN~gsf~~ 470 (504)
T PRK04036 452 NGYGK--------YRGVLLINSGTWQA 470 (504)
T ss_pred cceEE--------ECCEEEEECCcccc
Confidence 76541 35788888887543
|
|
| >cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.19 E-value=1.9e-05 Score=78.23 Aligned_cols=113 Identities=17% Similarity=0.236 Sum_probs=59.3
Q ss_pred EEecCCcccccCccchhhHHhhcccCCCCCCC-----C------CCCcceEEEEeCCEEE--EEEcCcccC--C------
Q 039280 258 MVIEGEHEIERQAENQTFAAYSSRFAFPSEES-----G------SSSSLYYSFNAGGIHF--VMLSAYIDY--D------ 316 (487)
Q Consensus 258 ~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~-----~------~~~~~yYsf~~g~v~f--i~Ldt~~~~--~------ 316 (487)
+.++||||+... .+.+..+.+...+|.-.. . ..-..|.-++.+++++ |.+-+.... .
T Consensus 85 ~~~lGNHefd~G--~~~l~~~~~~~~~p~l~aNv~~~~~~~~~~~~~~p~~i~~~~G~kIgviG~~~~~~~~~~~~~~~~ 162 (281)
T cd07409 85 AMTLGNHEFDDG--VEGLAPFLNNLKFPVLSANIDTSNEPPLLDGLLKPSTILTVGGEKIGIIGYTTPDTTELSSPGGKV 162 (281)
T ss_pred EEEeccccccCC--HHHHHHHHHhCCCCEEEEeeecCCCccccccccCCeEEEEECCEEEEEEEEecCcccccccCCCce
Confidence 556799999643 233444434333332100 0 0123355678888654 544432110 0
Q ss_pred CChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHH-cCCcEEEeCccccce
Q 039280 317 KSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYY-YGVDIVFNGHVHAYE 387 (487)
Q Consensus 317 ~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~-~~VdlvlsGH~H~ye 387 (487)
.-.+..+.+++.+++....+..-+|++.|-.... . . .+.++ .+||++|+||.|...
T Consensus 163 ~~~d~~~~~~~~v~~lr~~~~D~II~l~H~G~~~--------d----~---~la~~~~giD~IiggH~H~~~ 219 (281)
T cd07409 163 KFLDEIEAAQKEADKLKAQGVNKIIALSHSGYEV--------D----K---EIARKVPGVDVIVGGHSHTFL 219 (281)
T ss_pred EECCHHHHHHHHHHHHHhcCCCEEEEEeccCchh--------H----H---HHHHcCCCCcEEEeCCcCccc
Confidence 0123344566655554333466789999976421 1 1 22222 479999999999864
|
CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si |
| >cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.17 E-value=0.00013 Score=72.30 Aligned_cols=204 Identities=15% Similarity=0.183 Sum_probs=101.5
Q ss_pred CcEEEEEecCCCCCC--------------hHHHHHHHHH----cCCC-EEEEcCccccccccccCCCccccccccCCCCc
Q 039280 172 PNRIAVVGDLGLTYN--------------TTTTVAHLMS----NHPD-LLLLIGDLSYADLYLTNGTKSSCYLCQSIESP 232 (487)
Q Consensus 172 ~~~f~v~gD~~~~~~--------------~~~~l~~l~~----~~pd-fvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~ 232 (487)
.++|+..+|+|.... ..+.++++.+ .+++ ++|.+||+.....+
T Consensus 5 ~ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~------------------ 66 (282)
T cd07407 5 DINFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGL------------------ 66 (282)
T ss_pred eEEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeec------------------
Confidence 589999999997521 1223344332 3555 66789999853211
Q ss_pred ccchhhHHHHHHHHhhhccccCCCEEEecCCcccccCccc-hhhHHhhcccCCCC---C-----CC-C--CCCcceEEEE
Q 039280 233 IQETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIERQAEN-QTFAAYSSRFAFPS---E-----ES-G--SSSSLYYSFN 300 (487)
Q Consensus 233 ~~~~y~~~w~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~-~~~~~y~~~f~~P~---~-----~~-~--~~~~~yYsf~ 300 (487)
...+...+....+.|..+.- =.+++||||+...... ..+..+.....+|- | +. . .....|.-++
T Consensus 67 -~~~~~~~g~~~~~~mN~mgy---Da~tlGNHEFd~g~~~l~~l~~~~~~~~fp~l~aNi~~~~~~~~~~~~~~~y~i~~ 142 (282)
T cd07407 67 -SDASPPPGSYSNPIFRMMPY---DLLTIGNHELYNYEVADDEYEGFVPSWGDRYLTSNVDITDDSGLLVPIGSRYRKFT 142 (282)
T ss_pred -eeeecCCChHHHHHHHhcCC---cEEeecccccCccccHHHHHHHHHhhcCCCEEEEEEEEeCCCCcccccccceEEEE
Confidence 00110112223344444321 2578999999632111 11122222222221 0 00 0 1112355667
Q ss_pred eC-CEE--EEEEcCccc-------CCC--ChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHH
Q 039280 301 AG-GIH--FVMLSAYID-------YDK--SSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMED 368 (487)
Q Consensus 301 ~g-~v~--fi~Ldt~~~-------~~~--~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ 368 (487)
.+ +++ +|.|-+... +.. ...+.+|+.+.|++ ....-+|+++|....... + ..+....
T Consensus 143 ~~~G~kIgiiGltt~~~~~~~~~~f~d~~~~~~~~~v~~~l~~---~~~DvIIvlsH~G~~~d~-----~---~~~~~~~ 211 (282)
T cd07407 143 TKHGLRVLAFGFLFDFKGAANGVTVQPVADVVQEPWFQDAINN---EDVDLILVLGHMPVRDDA-----E---FKVLHDA 211 (282)
T ss_pred cCCCcEEEEEEEecccccCCCCcEEcCHHHHHHHHHHHHHHHh---cCCCEEEEEeCCCCCCCc-----c---HHHHHHH
Confidence 76 655 455543211 001 12223488877874 245669999998764321 1 1111223
Q ss_pred HHHHc-CCc-EEEeCccccceecccccCCccCCCCcEEEEeCCccccCC
Q 039280 369 LLYYY-GVD-IVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDGGNVEG 415 (487)
Q Consensus 369 l~~~~-~Vd-lvlsGH~H~yeR~~p~~~~~~~~~g~vyIv~G~gG~~~~ 415 (487)
+.++. ++| ++|.||+|..... ++ .+|+..+-.|.-|..-+
T Consensus 212 la~~~~~id~~Ii~GHsH~~~~~-~~------~~~~~ivq~G~~g~~lg 253 (282)
T cd07407 212 IRKIFPDTPIQFLGGHSHVRDFT-QY------DSSSTGLESGRYLETVG 253 (282)
T ss_pred HHHhCCCCCEEEEeCCcccccce-ec------cCcEEEEeccchhhceE
Confidence 33444 577 7999999975332 11 24666666777666443
|
YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at |
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.11 E-value=8.1e-05 Score=87.53 Aligned_cols=184 Identities=18% Similarity=0.223 Sum_probs=92.7
Q ss_pred CCcEEEEEecCCCCCC-h---HHHHHHHHHcCCCEEEE-cCccccccccccCCCccccccccCCCCcccchhhHHHHHHH
Q 039280 171 YPNRIAVVGDLGLTYN-T---TTTVAHLMSNHPDLLLL-IGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWG 245 (487)
Q Consensus 171 ~~~~f~v~gD~~~~~~-~---~~~l~~l~~~~pdfvl~-~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~ 245 (487)
..++|++++|+|.... . ...++++.+.+|+.+++ +||++...... . ...+....
T Consensus 659 ~~l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~-------------------~--~~~g~~~~ 717 (1163)
T PRK09419 659 WELTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYS-------------------N--LLKGLPVL 717 (1163)
T ss_pred eEEEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchh-------------------h--hcCChHHH
Confidence 4699999999996542 2 23456666678887765 99998432100 0 00112223
Q ss_pred HhhhccccCCCEEEecCCcccccCccchhhHHhhcccC------------CCC---C----CCCC---CCcceEEEEeCC
Q 039280 246 RYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFA------------FPS---E----ESGS---SSSLYYSFNAGG 303 (487)
Q Consensus 246 ~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~------------~P~---~----~~~~---~~~~yYsf~~g~ 303 (487)
+.|..+ -.-++++||||+.... ..+..+..... +|- | ..+. ....|.-++.++
T Consensus 718 ~~ln~l---g~d~~~~GNHEfd~g~--~~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G 792 (1163)
T PRK09419 718 KMMKEM---GYDASTFGNHEFDWGP--DVLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNG 792 (1163)
T ss_pred HHHhCc---CCCEEEecccccccCh--HHHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECC
Confidence 333333 1235699999986432 22222222211 111 0 0011 112456678887
Q ss_pred EE--EEEEcCcc-cC-C--------CChHHHHHHHHHhcccC-CCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHH
Q 039280 304 IH--FVMLSAYI-DY-D--------KSSDQYKWLESDLGDVD-REVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLL 370 (487)
Q Consensus 304 v~--fi~Ldt~~-~~-~--------~~~~Q~~WL~~~L~~~~-r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~ 370 (487)
++ ||.+-+.. .. . .-.+..+.+++.+++.. ......+|++.|......... .+ ....+|.
T Consensus 793 ~kIgiiGltt~~~~~~~~p~~~~~l~f~d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~~~d~~~--~~-----~~~~~lA 865 (1163)
T PRK09419 793 KKVGFIGLTTPETAYKTSPGNVKNLEFKDPAEAAKKWVKELKEKEKVDAIIALTHLGSNQDRTT--GE-----ITGLELA 865 (1163)
T ss_pred EEEEEEEecccccccccCCCCcCCcEEcCHHHHHHHHHHHHHhhcCCCEEEEEecCCccccccc--cc-----cHHHHHH
Confidence 55 45554321 00 0 01122233333333322 135667999999886532111 01 1122344
Q ss_pred HHc-CCcEEEeCccccce
Q 039280 371 YYY-GVDIVFNGHVHAYE 387 (487)
Q Consensus 371 ~~~-~VdlvlsGH~H~ye 387 (487)
++. +||++|.||+|...
T Consensus 866 ~~v~gIDvIigGHsH~~~ 883 (1163)
T PRK09419 866 KKVKGVDAIISAHTHTLV 883 (1163)
T ss_pred HhCCCCCEEEeCCCCccc
Confidence 433 79999999999754
|
|
| >cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.08 E-value=4.6e-06 Score=78.82 Aligned_cols=37 Identities=30% Similarity=0.327 Sum_probs=24.7
Q ss_pred EEEEEecCCCCCCh-HHHHHHHHH-cCCCEEEEcCcccc
Q 039280 174 RIAVVGDLGLTYNT-TTTVAHLMS-NHPDLLLLIGDLSY 210 (487)
Q Consensus 174 ~f~v~gD~~~~~~~-~~~l~~l~~-~~pdfvl~~GDl~y 210 (487)
|++++||+|..... .+.++.+.. .++|.++++||+++
T Consensus 2 ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~ 40 (207)
T cd07424 2 RDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLID 40 (207)
T ss_pred CEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCccc
Confidence 68999999965321 122222221 25899999999995
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all |
| >TIGR00282 metallophosphoesterase, MG_246/BB_0505 family | Back alignment and domain information |
|---|
Probab=98.07 E-value=0.0002 Score=69.85 Aligned_cols=194 Identities=15% Similarity=0.139 Sum_probs=102.0
Q ss_pred cEEEEEecCCCCCCh---HHHHHHHHH-cCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhh
Q 039280 173 NRIAVVGDLGLTYNT---TTTVAHLMS-NHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYM 248 (487)
Q Consensus 173 ~~f~v~gD~~~~~~~---~~~l~~l~~-~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~ 248 (487)
+||+++||+=..... ...+.++.+ .++||++..||.+-. +. |-. +.. .+.+
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~g-G~---Gi~-----------------~~~----~~~L 55 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTH-GK---GLT-----------------LKI----YEFL 55 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCC-CC---CCC-----------------HHH----HHHH
Confidence 589999999644322 233455554 478999999999842 11 110 111 2222
Q ss_pred hccccCCCEEEecCCcccccCccchhhHHhhcccCCCCCCC-CCCCcceEEEEeCCEEEEEEcC--cccCCC--ChHHHH
Q 039280 249 QPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEES-GSSSSLYYSFNAGGIHFVMLSA--YIDYDK--SSDQYK 323 (487)
Q Consensus 249 ~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~-~~~~~~yYsf~~g~v~fi~Ldt--~~~~~~--~~~Q~~ 323 (487)
.. ..+-++ +.|||+++...--...... .+.-.|.+-+ ...+..|..++.++..+-+++- ...... ...-++
T Consensus 56 ~~--~GvDvi-T~GNH~~Dkge~~~~i~~~-~~~lrpanyp~~~pG~g~~i~~~nG~kiaVinl~G~~fm~~~~~~~Pf~ 131 (266)
T TIGR00282 56 KQ--SGVNYI-TMGNHTWFQKLILDVVINQ-KDLVRPLNFDTSFAGKGSLVFEFNGAKIAVTNLQGTSVNLPFKTTNPFK 131 (266)
T ss_pred Hh--cCCCEE-EccchhccCcHHHHHHhcc-ccccccCCCCCCCCCCCcEEEEECCEEEEEEECCCcccCCccccCCHHH
Confidence 22 244444 4499999743110011111 1111122211 1223446667888876655553 211111 122233
Q ss_pred HHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceecccccCCccCCCCcE
Q 039280 324 WLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPV 403 (487)
Q Consensus 324 WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~p~~~~~~~~~g~v 403 (487)
-+++.+++.+. +++.+||.+|.-.- .. +.....+-+.+|++|+.-|+|...--.. +=|.|+-
T Consensus 132 ~~d~~i~~lk~-~~d~IIVd~Haeat-----------sE-K~a~~~~ldg~vsaVvGtHtHV~TaD~~-----il~~gta 193 (266)
T TIGR00282 132 VLKELINMLKK-DCDLIFVDFHAETT-----------SE-KNAFGMAFDGYVTAVVGTHTHVPTADLR-----ILPKGTA 193 (266)
T ss_pred HHHHHHHhhhc-CCCEEEEEeCCCCH-----------HH-HHHHHHHhCCCccEEEeCCCCCCCCcce-----eCCCCCE
Confidence 34444444322 35679999995421 11 3334666778999999999997533322 2368999
Q ss_pred EEEe-CCcccc
Q 039280 404 YILV-GDGGNV 413 (487)
Q Consensus 404 yIv~-G~gG~~ 413 (487)
||+- |.-|..
T Consensus 194 yitD~Gm~G~~ 204 (266)
T TIGR00282 194 YITDVGMTGPF 204 (266)
T ss_pred EEecCCcccCc
Confidence 9873 555554
|
A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase. |
| >cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.05 E-value=3.8e-05 Score=74.44 Aligned_cols=198 Identities=19% Similarity=0.196 Sum_probs=96.1
Q ss_pred EEEecCCCCCCh--H----HHHHHHHHc-----CCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHH
Q 039280 176 AVVGDLGLTYNT--T----TTVAHLMSN-----HPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYW 244 (487)
Q Consensus 176 ~v~gD~~~~~~~--~----~~l~~l~~~-----~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~ 244 (487)
++++|+|.+... . ..++.+... ++|.|+++||++...... .+... ..........+..+
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~-~~~~~---------~~~~~~~~~~~~~~ 71 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVY-PGQEE---------ELEILDIYEQYEEA 71 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccC-Ccchh---------hhhhhhHHHHHHHH
Confidence 579999976432 1 222333332 469999999999531000 00000 00000011234556
Q ss_pred HHhhhccccCCCEEEecCCcccccCcc--chhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCcc--c---C--
Q 039280 245 GRYMQPLVSNVPTMVIEGEHEIERQAE--NQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYI--D---Y-- 315 (487)
Q Consensus 245 ~~~~~~l~~~~P~~~v~GNHD~~~~~~--~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~--~---~-- 315 (487)
.+.++.+...+|+++++||||.....- ......+...+. +.+ ..-..+. +.+.+++.+|++..... + +
T Consensus 72 ~~~l~~L~~~~~v~~ipGNHD~~~~~~pq~~l~~~l~~~~~-~~~-v~~l~Np-~~~~~~g~~i~~~~G~~~~d~~~~~~ 148 (243)
T cd07386 72 AEYLSDVPSHIKIIIIPGNHDAVRQAEPQPALPEEIRKLFL-PGN-VEFVSNP-ALVKIHGVDVLIYHGRSIDDVVKLIP 148 (243)
T ss_pred HHHHHhcccCCeEEEeCCCCCcccccCCCCCccHHHHhhcC-CCc-eEEeCCC-CEEEECCEEEEEECCCCHHHHHHhCC
Confidence 667777777899999999999853210 011122222221 100 0001122 25778888887653211 0 0
Q ss_pred -CCChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceecccccC
Q 039280 316 -DKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYN 394 (487)
Q Consensus 316 -~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~p~~~ 394 (487)
.....-.++|+..|.... -.|.. -.-.|.+... .. .+..+...+++|+||.|.+....
T Consensus 149 ~~~~~~~~~~~~~~l~~~h--l~P~~--~~~~~~~~~~-~~------------~~~~~~~p~vii~Gh~h~~~~~~---- 207 (243)
T cd07386 149 GLSYDKPGKAMEELLKRRH--LAPIY--GGRTPIAPEP-ED------------YLVIDEVPDILHTGHVHVYGVGV---- 207 (243)
T ss_pred CCCcccHHHHHHHHHhhcc--cCCCC--CCCEeeCCCC-CC------------CEEecCCCCEEEECCCCchHhEE----
Confidence 112333566666666521 11100 0001111100 00 01112357899999999976652
Q ss_pred CccCCCCcEEEEeCCcc
Q 039280 395 YSLDPCGPVYILVGDGG 411 (487)
Q Consensus 395 ~~~~~~g~vyIv~G~gG 411 (487)
-.|+.+|..|+.-
T Consensus 208 ----~~~~~~vn~Gsf~ 220 (243)
T cd07386 208 ----YRGVLLVNSGTWQ 220 (243)
T ss_pred ----ECCEEEEECCCCc
Confidence 2478888888754
|
The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera |
| >KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=98.04 E-value=4.5e-05 Score=77.61 Aligned_cols=116 Identities=22% Similarity=0.355 Sum_probs=70.2
Q ss_pred CCcEEEEEecCCCCCChH------------------HHHHHHH-HcCCCEEEEcCccccccccccCCCccccccccCCCC
Q 039280 171 YPNRIAVVGDLGLTYNTT------------------TTVAHLM-SNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIES 231 (487)
Q Consensus 171 ~~~~f~v~gD~~~~~~~~------------------~~l~~l~-~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~ 231 (487)
.++|++.++|.|.-.+.. +.+..+. ..+||.++++||+... |...
T Consensus 47 n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDe------G~~~---------- 110 (410)
T KOG3662|consen 47 NSTKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDE------GQWA---------- 110 (410)
T ss_pred CceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEecccccc------CccC----------
Confidence 378999999998764211 1111111 2599999999999953 3211
Q ss_pred cccchhhHHHHHHHHhhhccccCCCEEEecCCcccccCccc--hhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEE
Q 039280 232 PIQETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIERQAEN--QTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVML 309 (487)
Q Consensus 232 ~~~~~y~~~w~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~--~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~L 309 (487)
..+.|++..+.|.+.... ...+|.+.++||||++..... .....|...| ++...+|++|++.|+++
T Consensus 111 -~~eEf~~~~~RfkkIf~~-k~~~~~~~i~GNhDIGf~~~~~~~~i~Rfe~~f----------g~~~r~f~v~~~tf~~~ 178 (410)
T KOG3662|consen 111 -GDEEFKKRYERFKKIFGR-KGNIKVIYIAGNHDIGFGNELIPEWIDRFESVF----------GPTERRFDVGNLTFVMF 178 (410)
T ss_pred -ChHHHHHHHHHHHHhhCC-CCCCeeEEeCCccccccccccchhHHHHHHHhh----------cchhhhhccCCceeEEe
Confidence 112333333334433322 358999999999999743211 1113343334 22456799999999999
Q ss_pred cCccc
Q 039280 310 SAYID 314 (487)
Q Consensus 310 dt~~~ 314 (487)
|++..
T Consensus 179 d~~~l 183 (410)
T KOG3662|consen 179 DSNAL 183 (410)
T ss_pred eehhh
Confidence 98753
|
|
| >cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.98 E-value=1.3e-05 Score=75.79 Aligned_cols=25 Identities=16% Similarity=0.228 Sum_probs=20.8
Q ss_pred HHHHHHHHcCCcEEEeCccccceec
Q 039280 365 EMEDLLYYYGVDIVFNGHVHAYERS 389 (487)
Q Consensus 365 ~l~~l~~~~~VdlvlsGH~H~yeR~ 389 (487)
.+..+|+.++.++++.||+|.....
T Consensus 158 ~~~~~l~~~~~~~iv~GHTh~~~~~ 182 (208)
T cd07425 158 HLDKVLERLGAKRMVVGHTPQEGGI 182 (208)
T ss_pred HHHHHHHHcCCCeEEEcCeeeecCc
Confidence 5778889999999999999975443
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal |
| >TIGR00619 sbcd exonuclease SbcD | Back alignment and domain information |
|---|
Probab=97.98 E-value=1.9e-05 Score=76.93 Aligned_cols=73 Identities=22% Similarity=0.349 Sum_probs=46.8
Q ss_pred cEEEEEecCCCCCCh-------------HHHHHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhH
Q 039280 173 NRIAVVGDLGLTYNT-------------TTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQP 239 (487)
Q Consensus 173 ~~f~v~gD~~~~~~~-------------~~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~ 239 (487)
|||++++|+|.+... ...++.+.+.++|+||++||+.... .. .. .
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~------~p--------------~~--~ 58 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTA------NP--------------PA--E 58 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCC------CC--------------CH--H
Confidence 689999999987431 1233444567899999999999531 10 00 1
Q ss_pred HHHHHHHhhhccc-cC-CCEEEecCCcccc
Q 039280 240 RWDYWGRYMQPLV-SN-VPTMVIEGEHEIE 267 (487)
Q Consensus 240 ~w~~~~~~~~~l~-~~-~P~~~v~GNHD~~ 267 (487)
....+.+.++.+. .. +|+++++||||..
T Consensus 59 ~~~~~~~~l~~l~~~~~i~v~~i~GNHD~~ 88 (253)
T TIGR00619 59 AQELFNAFFRNLSDANPIPIVVISGNHDSA 88 (253)
T ss_pred HHHHHHHHHHHHHhcCCceEEEEccCCCCh
Confidence 1222344444442 23 8999999999985
|
This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). |
| >cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00018 Score=71.50 Aligned_cols=50 Identities=26% Similarity=0.199 Sum_probs=28.2
Q ss_pred CCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccce
Q 039280 336 VTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYE 387 (487)
Q Consensus 336 ~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~ye 387 (487)
+..-+|+++|-......... ........+.+.+...++|++|.||+|...
T Consensus 173 ~~D~VI~lsH~G~~~~~~~~--~~~~~~~~lA~~~~~~giD~IigGHsH~~~ 222 (285)
T cd07405 173 KPDIVIAATHMGHYDNGEHG--SNAPGDVEMARALPAGGLDLIVGGHSQDPV 222 (285)
T ss_pred CCCEEEEEecccccCCcccc--ccCchHHHHHHhcCCCCCCEEEeCCCCccc
Confidence 45669999998875321100 000001122222223589999999999865
|
UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs |
| >PRK11439 pphA serine/threonine protein phosphatase 1; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=8.5e-06 Score=77.63 Aligned_cols=37 Identities=30% Similarity=0.435 Sum_probs=26.6
Q ss_pred EEEEEecCCCCCCh-HHHHHHHHHc-CCCEEEEcCcccc
Q 039280 174 RIAVVGDLGLTYNT-TTTVAHLMSN-HPDLLLLIGDLSY 210 (487)
Q Consensus 174 ~f~v~gD~~~~~~~-~~~l~~l~~~-~pdfvl~~GDl~y 210 (487)
|++++||+|..... .+.++++... +.|-++++||++.
T Consensus 18 ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvD 56 (218)
T PRK11439 18 HIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLID 56 (218)
T ss_pred eEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccC
Confidence 89999999987432 2344444322 5789999999995
|
|
| >cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.85 E-value=3.1e-05 Score=70.59 Aligned_cols=17 Identities=18% Similarity=0.272 Sum_probs=14.2
Q ss_pred cCCcEEEeCccccceec
Q 039280 373 YGVDIVFNGHVHAYERS 389 (487)
Q Consensus 373 ~~VdlvlsGH~H~yeR~ 389 (487)
.+.|++++||+|.....
T Consensus 124 ~~~d~vi~GHtH~~~~~ 140 (168)
T cd07390 124 DRGSWNLHGHIHSNSPD 140 (168)
T ss_pred CCCeEEEEeeeCCCCCC
Confidence 46799999999987666
|
This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d |
| >COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00053 Score=73.96 Aligned_cols=211 Identities=18% Similarity=0.151 Sum_probs=107.4
Q ss_pred CCcEEEEEecCCCCCC------------h----HHHHHHHHHc-CCCEEEEcCccccccccccCCCccccccccCCCCcc
Q 039280 171 YPNRIAVVGDLGLTYN------------T----TTTVAHLMSN-HPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPI 233 (487)
Q Consensus 171 ~~~~f~v~gD~~~~~~------------~----~~~l~~l~~~-~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~ 233 (487)
..++|+...|+|.... . ...++++.+. +..++|.+||+...+...+.
T Consensus 25 ~~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~---------------- 88 (517)
T COG0737 25 VKLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDY---------------- 88 (517)
T ss_pred eeEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCcccccc----------------
Confidence 4789999999998643 1 1223444444 34678999999954211111
Q ss_pred cchhhHHHHHHHHhhhccccCCCEEEecCCcccccCccchhhHHhhcccCCCC---C---C---CCCCCcceEEEEeCCE
Q 039280 234 QETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPS---E---E---SGSSSSLYYSFNAGGI 304 (487)
Q Consensus 234 ~~~y~~~w~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~---~---~---~~~~~~~yYsf~~g~v 304 (487)
........+.|..+. .=..++||||+... .+.+..+.....+|- | . ....-+.|.-++.+++
T Consensus 89 ----~~~g~~~~~~mN~m~---yDa~tiGNHEFd~g--~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~ 159 (517)
T COG0737 89 ----LTKGEPTVDLLNALG---YDAMTLGNHEFDYG--LEALARLLDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGV 159 (517)
T ss_pred ----ccCCChHHHHHhhcC---CcEEeecccccccC--HHHHHHHHhccCCceEEeeeEecCCCCccCcCCeEEEecCCe
Confidence 011111223333332 22678999999643 233444444444441 0 1 0122356778888875
Q ss_pred E--EEEEcCcc--cC---C-----CChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHH
Q 039280 305 H--FVMLSAYI--DY---D-----KSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYY 372 (487)
Q Consensus 305 ~--fi~Ldt~~--~~---~-----~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~ 372 (487)
+ +|.+.+.. .+ + .-.+..+++++.+.+...+...-+|+++|.+......-.. ......... .
T Consensus 160 KIgiIG~~~~~~~~~~~~~~~~~~~f~d~~e~~~~~i~elk~~~vD~iI~LsH~G~~~d~~~~~-~~~~~~~~~----~- 233 (517)
T COG0737 160 KIGIIGLTTPTIPTWEKPNAIEGVTFRDPIEAAKKYIPELKGEGVDVIIALSHLGIEDDLELAS-EVPGDVDVA----V- 233 (517)
T ss_pred EEEEEEecCCcccccccccccCCcEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCcCccccccc-ccccccccc----c-
Confidence 4 55555311 11 1 1124455666655554333356699999988764322110 000000000 1
Q ss_pred cCCcEEEeCccccceecccccCCccCCCCcEEEEeCCccccCC
Q 039280 373 YGVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDGGNVEG 415 (487)
Q Consensus 373 ~~VdlvlsGH~H~yeR~~p~~~~~~~~~g~vyIv~G~gG~~~~ 415 (487)
.++|+++.||.|.+--... .....+++..+-.|..|..-+
T Consensus 234 ~~iD~i~~GH~H~~~~~~~---~~~~~~~t~ivqag~~gk~vG 273 (517)
T COG0737 234 PGIDLIIGGHSHTVFPGGD---KPGTVNGTPIVQAGEYGKYVG 273 (517)
T ss_pred cCcceEeccCCcccccCCc---ccCccCCEEEEccChhhCcee
Confidence 4499999999996421100 011124556666666665433
|
|
| >PRK10966 exonuclease subunit SbcD; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=5.3e-05 Score=78.85 Aligned_cols=73 Identities=21% Similarity=0.374 Sum_probs=45.7
Q ss_pred cEEEEEecCCCCCCh-------------HHHHHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhH
Q 039280 173 NRIAVVGDLGLTYNT-------------TTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQP 239 (487)
Q Consensus 173 ~~f~v~gD~~~~~~~-------------~~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~ 239 (487)
|||++++|+|.+... ...++.+.+.+||+||++||+... +.. ..+
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~------~~p--------------~~~-- 58 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDT------GSP--------------PSY-- 58 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccC------CCC--------------cHH--
Confidence 689999999987321 123344456799999999999842 110 001
Q ss_pred HHHHHHHhhhccc-cCCCEEEecCCcccc
Q 039280 240 RWDYWGRYMQPLV-SNVPTMVIEGEHEIE 267 (487)
Q Consensus 240 ~w~~~~~~~~~l~-~~~P~~~v~GNHD~~ 267 (487)
....+.+++..+. ..+|+++++||||..
T Consensus 59 a~~~~~~~l~~L~~~~~~v~~I~GNHD~~ 87 (407)
T PRK10966 59 ARELYNRFVVNLQQTGCQLVVLAGNHDSV 87 (407)
T ss_pred HHHHHHHHHHHHHhcCCcEEEEcCCCCCh
Confidence 1122223333332 368999999999975
|
|
| >PHA02546 47 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
Probab=97.77 E-value=6.4e-05 Score=76.55 Aligned_cols=74 Identities=15% Similarity=0.209 Sum_probs=45.6
Q ss_pred cEEEEEecCCCCCCh---------HHH----HHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhH
Q 039280 173 NRIAVVGDLGLTYNT---------TTT----VAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQP 239 (487)
Q Consensus 173 ~~f~v~gD~~~~~~~---------~~~----l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~ 239 (487)
|||+++||+|.+... ... ++.+.+.+||+||++||+.... ... . ..
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~----~~~-------------~----~~ 59 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVR----KAI-------------T----QN 59 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCC----CCC-------------C----HH
Confidence 699999999987431 123 3334567999999999998421 000 0 01
Q ss_pred HHHHHHH-hhhcc-ccCCCEEEecCCcccc
Q 039280 240 RWDYWGR-YMQPL-VSNVPTMVIEGEHEIE 267 (487)
Q Consensus 240 ~w~~~~~-~~~~l-~~~~P~~~v~GNHD~~ 267 (487)
......+ +++.+ ...+|+++++||||..
T Consensus 60 ~~~~~~~~l~~~L~~~gi~v~~I~GNHD~~ 89 (340)
T PHA02546 60 TMNFVREKIFDLLKEAGITLHVLVGNHDMY 89 (340)
T ss_pred HHHHHHHHHHHHHHHCCCeEEEEccCCCcc
Confidence 1111112 23333 2479999999999974
|
|
| >cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00015 Score=64.74 Aligned_cols=54 Identities=17% Similarity=-0.033 Sum_probs=33.9
Q ss_pred EEEEcCCCccccCCCC-cc----hhHHHHHHHHHHHHHcCCcEEEeCccc-cceecccccC
Q 039280 340 LIAAWHPPWYSTYSAH-YR----EVECMRVEMEDLLYYYGVDIVFNGHVH-AYERSNRVYN 394 (487)
Q Consensus 340 ~Iv~~H~P~y~~~~~~-~~----~~~~~r~~l~~l~~~~~VdlvlsGH~H-~yeR~~p~~~ 394 (487)
-|+++|.|++...... .. ....-...+.+++++.+....||||.| -|||- |..+
T Consensus 71 DILlTh~wP~gi~~~~~~~~~~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~fyer~-Pf~~ 130 (150)
T cd07380 71 DILLTSEWPKGISKLSKVPFEETLLICGSDLIAELAKKLKPRYHFAGLEGVFYERE-PYRN 130 (150)
T ss_pred CEEECCCCchhhhhhCCCcccccccCCCCHHHHHHHHHcCCCeEeecCCCceEeec-CccC
Confidence 4777888776542110 00 001113566778889999999999999 66665 6544
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site |
| >cd08162 MPP_PhoA_N Synechococcus sp | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.001 Score=66.86 Aligned_cols=38 Identities=18% Similarity=0.039 Sum_probs=24.7
Q ss_pred cEEEEEecCCCCCC----h---HHHHHHHHHc----CC-CEEEEcCcccc
Q 039280 173 NRIAVVGDLGLTYN----T---TTTVAHLMSN----HP-DLLLLIGDLSY 210 (487)
Q Consensus 173 ~~f~v~gD~~~~~~----~---~~~l~~l~~~----~p-dfvl~~GDl~y 210 (487)
++|+...|+|.... . ...++++.+. .+ -++|.+||+..
T Consensus 1 l~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~q 50 (313)
T cd08162 1 LQLLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFI 50 (313)
T ss_pred CeEEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCcccc
Confidence 47899999997632 1 1235555432 33 48899999984
|
strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat |
| >TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00068 Score=73.53 Aligned_cols=110 Identities=14% Similarity=0.178 Sum_probs=57.3
Q ss_pred EEecCCcccccCccchhhHHhhcccCCCCCC------CC----CCCcceEEEEeCC--EEEEEEcCccc-C---CC----
Q 039280 258 MVIEGEHEIERQAENQTFAAYSSRFAFPSEE------SG----SSSSLYYSFNAGG--IHFVMLSAYID-Y---DK---- 317 (487)
Q Consensus 258 ~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~------~~----~~~~~yYsf~~g~--v~fi~Ldt~~~-~---~~---- 317 (487)
++++||||+... ...+..+.....+|--. .. ..-..|.-++.++ |-||.|.+... . ..
T Consensus 85 a~~lGNHEFd~G--~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~p~~i~~~~g~kIgiiGl~~~~~~~~~~~~~~~~ 162 (550)
T TIGR01530 85 FFTLGNHEFDAG--NEGLKEFLEPLEIPVLSANVIPDAASILHGKWKPSAIFERAGEKIAIIGLDTVKKTVESSSPGKDI 162 (550)
T ss_pred EEEeccccccCC--HHHHHHHHHhCCCCEEEEeeecCCCcccccCcCceEEEEECCeEEEEEEeecCcccccccCCCCce
Confidence 678999999642 23344443333333210 00 1123466678887 55677754211 0 00
Q ss_pred ---C-hHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHH-cCCcEEEeCccccce
Q 039280 318 ---S-SDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYY-YGVDIVFNGHVHAYE 387 (487)
Q Consensus 318 ---~-~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~-~~VdlvlsGH~H~ye 387 (487)
. -+-.+-..+.|++ ....-+|++.|..... .. .|.++ -+||++|.||+|..-
T Consensus 163 ~f~d~~~~~~~~v~~Lk~---~g~D~II~lsH~g~~~--------d~-------~la~~~~~iD~IigGHsH~~~ 219 (550)
T TIGR01530 163 KFIDEIAAAQIAANALKQ---QGINKIILLSHAGFEK--------NC-------EIAQKINDIDVIVSGDSHYLL 219 (550)
T ss_pred EECCHHHHHHHHHHHHHh---CCCCEEEEEecCCcHH--------HH-------HHHhcCCCCCEEEeCCCCccc
Confidence 0 0112222234443 3456699999965321 11 23333 279999999999864
|
This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc. |
| >PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00084 Score=72.96 Aligned_cols=184 Identities=18% Similarity=0.163 Sum_probs=89.3
Q ss_pred CCcEEEEEecCCCCCC--------hH---HHHHHHHHc----CC-CEEEEcCccccccccccCCCccccccccCCCCccc
Q 039280 171 YPNRIAVVGDLGLTYN--------TT---TTVAHLMSN----HP-DLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQ 234 (487)
Q Consensus 171 ~~~~f~v~gD~~~~~~--------~~---~~l~~l~~~----~p-dfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~ 234 (487)
..++|+.++|+|.... .. ..++++.+. .+ -++|.+||+...... .
T Consensus 33 ~~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~-------------------s 93 (551)
T PRK09558 33 YKITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPE-------------------S 93 (551)
T ss_pred eEEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEh-------------------h
Confidence 4689999999998632 11 234444322 34 478899999842110 0
Q ss_pred chhhHHHHHHHHhhhccccCCCEEEecCCcccccCccchhhHHhhcccCCCC---C----CCC-CCCcceEEEEeCCEEE
Q 039280 235 ETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPS---E----ESG-SSSSLYYSFNAGGIHF 306 (487)
Q Consensus 235 ~~y~~~w~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~---~----~~~-~~~~~yYsf~~g~v~f 306 (487)
..+ ......+.|..+ ..= ..++||||+... ...+..+.....+|- | ..+ ..-..|.-++.+++++
T Consensus 94 ~~~--~g~~~i~~mN~~--g~D-a~tlGNHEFD~G--~~~L~~~~~~a~fp~l~aNv~~~~~g~~~~~py~i~~~~G~kI 166 (551)
T PRK09558 94 DLQ--DAEPDFRGMNLI--GYD-AMAVGNHEFDNP--LSVLRKQEKWAKFPFLSANIYQKSTGERLFKPYAIFDRQGLKI 166 (551)
T ss_pred hhc--CCchhHHHHhcC--CCC-EEcccccccCcC--HHHHHHhhccCCCCEEEEEEEECCCCCcccCCeEEEEECCEEE
Confidence 000 011112333333 222 566799999643 233333333333332 1 000 1123466678888654
Q ss_pred --EEEcCccc--C-----------CCChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHH
Q 039280 307 --VMLSAYID--Y-----------DKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLY 371 (487)
Q Consensus 307 --i~Ldt~~~--~-----------~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~ 371 (487)
|.+-+... + ....+..+-+-++|++. .+..-+|++.|.......... ..... -..|.+
T Consensus 167 giiG~~t~~~~~~~~~~~~~~~~f~d~~e~a~~~v~~Lk~~--~~~D~IV~LsH~G~~~~~~~~-~~~~~----d~~la~ 239 (551)
T PRK09558 167 AVIGLTTEDTAKIGNPEYFTDIEFRDPAEEAKKVIPELKQT--EKPDVIIALTHMGHYDDGEHG-SNAPG----DVEMAR 239 (551)
T ss_pred EEEEEeccccccccCCCCcCCceECCHHHHHHHHHHHHHhc--cCCCEEEEEeccccccCCccC-CCCcc----HHHHHH
Confidence 55433211 0 00112223333344431 346679999998875321110 00000 013333
Q ss_pred Hc---CCcEEEeCccccce
Q 039280 372 YY---GVDIVFNGHVHAYE 387 (487)
Q Consensus 372 ~~---~VdlvlsGH~H~ye 387 (487)
+. +||++|.||.|..-
T Consensus 240 ~~~~~~IDvIlgGHsH~~~ 258 (551)
T PRK09558 240 SLPAGGLDMIVGGHSQDPV 258 (551)
T ss_pred hCCccCceEEEeCCCCccc
Confidence 33 79999999999753
|
|
| >PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0068 Score=68.05 Aligned_cols=47 Identities=21% Similarity=0.091 Sum_probs=27.5
Q ss_pred CCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccc
Q 039280 335 EVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAY 386 (487)
Q Consensus 335 ~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~y 386 (487)
....-+|++.|..+.........++. -..|.+--+||++|.||+|..
T Consensus 308 ~GaDvIIaLsH~G~~~d~~~~~~En~-----~~~LA~v~GIDaIvgGHsH~~ 354 (814)
T PRK11907 308 AGADIVLVLSHSGIGDDQYEVGEENV-----GYQIASLSGVDAVVTGHSHAE 354 (814)
T ss_pred cCCCEEEEEeCCCcccccccccccch-----hhHHhcCCCCCEEEECCCCCc
Confidence 35667999999876432111111111 112222347999999999985
|
|
| >cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00042 Score=63.43 Aligned_cols=51 Identities=22% Similarity=0.440 Sum_probs=32.1
Q ss_pred HHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhhhccccCCCEEEecCCcccc
Q 039280 195 MSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIE 267 (487)
Q Consensus 195 ~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~~~l~~~~P~~~v~GNHD~~ 267 (487)
.+.+||.|+++||+++... +. . ...+.... ........+|++.++||||..
T Consensus 38 ~~~~~d~lii~GDl~~~~~----~~----------------~-~~~~~~~~-~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 38 EEYGPERLIILGDLKHSFG----GL----------------S-RQEFEEVA-FLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred HhcCCCEEEEeCccccccc----cc----------------C-HHHHHHHH-HHHhccCCCeEEEEcccCccc
Confidence 3468999999999995310 10 0 11222221 233335678999999999974
|
This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro |
| >PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.011 Score=66.17 Aligned_cols=64 Identities=20% Similarity=0.041 Sum_probs=35.5
Q ss_pred CCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHc-CCcEEEeCccccceecccccCCccCCCCcEEEEeCCcccc
Q 039280 336 VTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYY-GVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDGGNV 413 (487)
Q Consensus 336 ~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~-~VdlvlsGH~H~yeR~~p~~~~~~~~~g~vyIv~G~gG~~ 413 (487)
.+.-+|++.|......... ...+ ..... +.+. +||++|.||+|..-.. . .+|+..+..|..|..
T Consensus 244 GaDvIIaLsH~G~~~d~~~---~~~e--na~~~-l~~v~gID~IlgGHsH~~~~~-~-------ingv~vvqaG~~G~~ 308 (780)
T PRK09418 244 GADVIVALAHSGVDKSGYN---VGME--NASYY-LTEVPGVDAVLMGHSHTEVKD-V-------FNGVPVVMPGVFGSN 308 (780)
T ss_pred CCCEEEEEeccCccccccc---ccch--hhhHH-HhcCCCCCEEEECCCCCcccc-c-------CCCEEEEEcChhhcE
Confidence 4667999999876432110 0000 11111 2343 7999999999986532 1 134555555655554
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0072 Score=71.38 Aligned_cols=49 Identities=24% Similarity=0.227 Sum_probs=30.3
Q ss_pred CCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHH-cCCcEEEeCcccccee
Q 039280 335 EVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYY-YGVDIVFNGHVHAYER 388 (487)
Q Consensus 335 ~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~-~~VdlvlsGH~H~yeR 388 (487)
....-+|++.|............+ ....+|.++ -+||++|.||+|....
T Consensus 233 ~gaDvII~l~H~G~~~~~~~~~~e-----n~~~~la~~~~gID~Il~GHsH~~~~ 282 (1163)
T PRK09419 233 GGADVIVALAHSGIESEYQSSGAE-----DSVYDLAEKTKGIDAIVAGHQHGLFP 282 (1163)
T ss_pred cCCCEEEEEeccCcCCCCCCCCcc-----hHHHHHHHhCCCCcEEEeCCCccccc
Confidence 356679999998865432111111 222344434 3799999999998753
|
|
| >PHA02239 putative protein phosphatase | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.001 Score=64.03 Aligned_cols=38 Identities=21% Similarity=0.317 Sum_probs=26.4
Q ss_pred cEEEEEecCCCCCCh-HHHHHHHHHc--CCCEEEEcCcccc
Q 039280 173 NRIAVVGDLGLTYNT-TTTVAHLMSN--HPDLLLLIGDLSY 210 (487)
Q Consensus 173 ~~f~v~gD~~~~~~~-~~~l~~l~~~--~pdfvl~~GDl~y 210 (487)
||++++||+|..... .+.++.+... ..|.++++||++.
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iD 41 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVD 41 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCC
Confidence 478999999965322 2344444332 3599999999995
|
|
| >KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0075 Score=59.82 Aligned_cols=182 Identities=24% Similarity=0.306 Sum_probs=101.7
Q ss_pred cEEEEEecCCCCCC-hHHHHHHHHHc---CCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhh
Q 039280 173 NRIAVVGDLGLTYN-TTTTVAHLMSN---HPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYM 248 (487)
Q Consensus 173 ~~f~v~gD~~~~~~-~~~~l~~l~~~---~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~ 248 (487)
+||+|-|++|...+ .-+++..+.+. +.|++|++||+---. |++.- ..-.+-..|+.. ..|.+..
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavR----n~~D~-------~siavPpKy~~m-~~F~~YY 68 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVR----NEQDL-------KSIAVPPKYRRM-GDFYKYY 68 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhc----chhhc-------ccccCCHHHHHH-HHHHHHh
Confidence 58999999997643 33456666654 899999999985321 11110 001122345433 3344433
Q ss_pred -hccccCCCEEEecCCcccccCccchhhHHhhcccCCCCCCCCCCCcceE-----EEEeCCEEEEEEcCc---ccCCC--
Q 039280 249 -QPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYY-----SFNAGGIHFVMLSAY---IDYDK-- 317 (487)
Q Consensus 249 -~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yY-----sf~~g~v~fi~Ldt~---~~~~~-- 317 (487)
..+.+.+|.+++-||||.. +|... +|..+- ...+.|| ...+|||++-.|+.- .+|..
T Consensus 69 sge~~APVlTIFIGGNHEAs---------nyL~e--LpyGGw-VApNIyYlG~agVv~~~gvRIggiSGI~k~~dy~kgh 136 (456)
T KOG2863|consen 69 SGEIKAPVLTIFIGGNHEAS---------NYLQE--LPYGGW-VAPNIYYLGYAGVVNFGGVRIGGISGIYKEHDYRKGH 136 (456)
T ss_pred CCcccCceeEEEecCchHHH---------HHHHh--cccCce-eccceEEeeecceEEECCEEEeeccchhhhhhcccCC
Confidence 3456789999999999984 23322 232210 1234565 367899999999862 22211
Q ss_pred ---------------ChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHH-------H----------HHH
Q 039280 318 ---------------SSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVEC-------M----------RVE 365 (487)
Q Consensus 318 ---------------~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~-------~----------r~~ 365 (487)
.-.+.+ ...|++. +.|-=|.++|-=+-... .+++... + ...
T Consensus 137 ~E~ppyn~stiRsiYHvR~~d--V~~Lkql---k~piDIfLSHDWP~GI~--~yGd~~~LLr~KPFFrqeie~~~LGSp~ 209 (456)
T KOG2863|consen 137 FEWPPYNNSTIRSIYHVRISD--VAKLKQL---KHPIDIFLSHDWPRGIY--YYGDKKQLLRLKPFFRQEIEEGKLGSPA 209 (456)
T ss_pred CCCCCccchhhhhhhhhhhhh--hHHHHhh---cCcceEEeecCCCcchh--hcCCHHHHHhcCcHHHHHHhcCCcCChH
Confidence 011111 1223332 23445777885322111 1111111 1 246
Q ss_pred HHHHHHHcCCcEEEeCcccc
Q 039280 366 MEDLLYYYGVDIVFNGHVHA 385 (487)
Q Consensus 366 l~~l~~~~~VdlvlsGH~H~ 385 (487)
+++||++.+...+|+.|.|.
T Consensus 210 ~~eLL~~LkP~yWfsAHLH~ 229 (456)
T KOG2863|consen 210 LEELLEDLKPQYWFSAHLHV 229 (456)
T ss_pred HHHHHHHhCcchhhhhhHhh
Confidence 78899999999999999996
|
|
| >COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0091 Score=61.88 Aligned_cols=89 Identities=18% Similarity=0.323 Sum_probs=55.9
Q ss_pred CCcEEEEEecCCCCCC------hHHHHHHHHH-----cCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhH
Q 039280 171 YPNRIAVVGDLGLTYN------TTTTVAHLMS-----NHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQP 239 (487)
Q Consensus 171 ~~~~f~v~gD~~~~~~------~~~~l~~l~~-----~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~ 239 (487)
..+++++++|.|.+.. +...++.+.- .+...++.+||++. +. | .|..+..+..+.+-| .
T Consensus 224 e~v~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VD--Gi---g----iYpgq~~eL~i~di~-~ 293 (481)
T COG1311 224 ERVYVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVD--GI---G----IYPGQEEELVIADIY-E 293 (481)
T ss_pred cceEEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEeccccc--cc---c----cccCcccccccccch-H
Confidence 4688999999998753 2233444431 24578999999994 22 1 111111111122222 3
Q ss_pred HHHHHHHhhhccccCCCEEEecCCcccccC
Q 039280 240 RWDYWGRYMQPLVSNVPTMVIEGEHEIERQ 269 (487)
Q Consensus 240 ~w~~~~~~~~~l~~~~P~~~v~GNHD~~~~ 269 (487)
+++++.+++..+-..+-+++.|||||....
T Consensus 294 qy~~~A~~L~~vp~~I~v~i~PGnhDa~r~ 323 (481)
T COG1311 294 QYEELAEFLDQVPEHIKVFIMPGNHDAVRQ 323 (481)
T ss_pred HHHHHHHHHhhCCCCceEEEecCCCCcccc
Confidence 567777788877788899999999998644
|
|
| >cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0013 Score=63.25 Aligned_cols=69 Identities=17% Similarity=0.292 Sum_probs=41.1
Q ss_pred cEEEEEecCCCCCCh-HHHHHHHHH--c--------CCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHH
Q 039280 173 NRIAVVGDLGLTYNT-TTTVAHLMS--N--------HPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRW 241 (487)
Q Consensus 173 ~~f~v~gD~~~~~~~-~~~l~~l~~--~--------~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w 241 (487)
+|++++||+|..... .++++++.- . +.|.++++||++.. |.. -
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDr------G~~--------------------s 54 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDR------GPD--------------------S 54 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCC------CCC--------------------H
Confidence 379999999986432 233444310 1 25899999999952 220 1
Q ss_pred HHHHHhhhccccCCCEEEecCCcccc
Q 039280 242 DYWGRYMQPLVSNVPTMVIEGEHEIE 267 (487)
Q Consensus 242 ~~~~~~~~~l~~~~P~~~v~GNHD~~ 267 (487)
.+..+.+..+...-.+.++.||||..
T Consensus 55 ~evl~~l~~l~~~~~~~~v~GNHE~~ 80 (234)
T cd07423 55 PEVLRLVMSMVAAGAALCVPGNHDNK 80 (234)
T ss_pred HHHHHHHHHHhhCCcEEEEECCcHHH
Confidence 12223333332233578999999973
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp |
| >PRK00166 apaH diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0014 Score=64.49 Aligned_cols=67 Identities=21% Similarity=0.358 Sum_probs=41.9
Q ss_pred cEEEEEecCCCCCCh-HHHHHHHH-HcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhhhc
Q 039280 173 NRIAVVGDLGLTYNT-TTTVAHLM-SNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYMQP 250 (487)
Q Consensus 173 ~~f~v~gD~~~~~~~-~~~l~~l~-~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~~~ 250 (487)
|+++++||+|..... .++++++. +.+.|.++++||++.. |.. . .+..+.+..
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdr------Gp~------------------s--~~vl~~l~~ 54 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNR------GPD------------------S--LEVLRFVKS 54 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCC------CcC------------------H--HHHHHHHHh
Confidence 478999999976432 22344432 2367999999999952 221 0 122333333
Q ss_pred cccCCCEEEecCCcccc
Q 039280 251 LVSNVPTMVIEGEHEIE 267 (487)
Q Consensus 251 l~~~~P~~~v~GNHD~~ 267 (487)
+ ..++.++.||||..
T Consensus 55 l--~~~~~~VlGNHD~~ 69 (275)
T PRK00166 55 L--GDSAVTVLGNHDLH 69 (275)
T ss_pred c--CCCeEEEecChhHH
Confidence 3 34688999999974
|
|
| >cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.011 Score=57.44 Aligned_cols=192 Identities=17% Similarity=0.186 Sum_probs=95.3
Q ss_pred EEEEecCCCCCChH------HHHHHHHH-----------cCCCEEEEcCccccccccccCCCccccccccCCCCcccchh
Q 039280 175 IAVVGDLGLTYNTT------TTVAHLMS-----------NHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETY 237 (487)
Q Consensus 175 f~v~gD~~~~~~~~------~~l~~l~~-----------~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y 237 (487)
+++++|++.+.... ..++.|.- .+..-+|++||.+...+-..+......+ +........+
T Consensus 2 i~~vSgL~ig~~~~~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~---~~~~~~~~~~ 78 (257)
T cd07387 2 IALVSGLGLGGNAESSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARY---LTKKSSAASV 78 (257)
T ss_pred EEEEcccccCCCccchHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhc---cccccchhhH
Confidence 68899998875521 12223321 1344799999999532110000000000 0000001111
Q ss_pred hHHHHHHHHhhhccccCCCEEEecCCcccccCccch-hh-HHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCcc--
Q 039280 238 QPRWDYWGRYMQPLVSNVPTMVIEGEHEIERQAENQ-TF-AAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYI-- 313 (487)
Q Consensus 238 ~~~w~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~-~~-~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~-- 313 (487)
...+++..++..+.+.+|+...|||||-....-.+ .+ ..+..+-....+ -....|. |.|++++++|++.+...
T Consensus 79 -~~~~~ld~~l~~l~~~i~V~imPG~~Dp~~~~lPQqplh~~lfp~s~~~~~-~~~vtNP-~~~~i~g~~vLgtsGqni~ 155 (257)
T cd07387 79 -EAVKELDNFLSQLASSVPVDLMPGEFDPANHSLPQQPLHRCLFPKSSNYST-LNLVTNP-YEFSIDGVRVLGTSGQNVD 155 (257)
T ss_pred -HHHHHHHHHHHhhhcCCeEEECCCCCCcccccCCCCCCCHHHhhcccccCC-cEEeCCC-eEEEECCEEEEEECCCCHH
Confidence 34566677788888899999999999986432111 11 011000000000 0011222 46999999999998753
Q ss_pred ---cCCCChHHHHHHHHHhcccCC-CCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceec
Q 039280 314 ---DYDKSSDQYKWLESDLGDVDR-EVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERS 389 (487)
Q Consensus 314 ---~~~~~~~Q~~WL~~~L~~~~r-~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~ 389 (487)
.+...+.-++.|++.|+-..- ..+|=.+ +.|... +. .+++-+.-.+++|+||.|.|+..
T Consensus 156 Di~ky~~~~~~l~~me~~L~wrHlaPTaPDTL-----~~yP~~-----~~-------Dpfvi~~~PhVyf~Gnq~~f~t~ 218 (257)
T cd07387 156 DILKYSSLESRLDILERTLKWRHIAPTAPDTL-----WCYPFT-----DR-------DPFILEECPHVYFAGNQPKFGTK 218 (257)
T ss_pred HHHHhCCCCCHHHHHHHHHHhcccCCCCCCcc-----ccccCC-----CC-------CceeecCCCCEEEeCCCcceeee
Confidence 133345557778888765210 0111011 111100 00 02222334799999999998765
|
PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily |
| >PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0026 Score=61.75 Aligned_cols=38 Identities=21% Similarity=0.345 Sum_probs=24.4
Q ss_pred cEEEEEecCCCCCCh-HHHHHHHHH---------cCCCEEEEcCcccc
Q 039280 173 NRIAVVGDLGLTYNT-TTTVAHLMS---------NHPDLLLLIGDLSY 210 (487)
Q Consensus 173 ~~f~v~gD~~~~~~~-~~~l~~l~~---------~~pdfvl~~GDl~y 210 (487)
+|++++||+|..... .+.++++.- ..-|.++++||++.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliD 48 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTD 48 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccC
Confidence 478999999976432 222333211 12368999999995
|
|
| >COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.016 Score=51.07 Aligned_cols=38 Identities=18% Similarity=0.167 Sum_probs=25.2
Q ss_pred EEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCcccc
Q 039280 340 LIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHA 385 (487)
Q Consensus 340 ~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~ 385 (487)
.|+++|.|.-..... + ........+.++++.+.||.|.
T Consensus 110 ~~~LsHyP~~~~~~~--~------~~~r~~y~~~~~~llIHGH~H~ 147 (186)
T COG4186 110 DVYLSHYPRPGQDHP--G------MESRFDYLRLRVPLLIHGHLHS 147 (186)
T ss_pred EEEEEeCCCCCCCCc--c------hhhhHHHHhccCCeEEeccccc
Confidence 799999997543211 1 1222334456899999999998
|
|
| >TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0041 Score=59.45 Aligned_cols=70 Identities=19% Similarity=0.342 Sum_probs=44.8
Q ss_pred cEEEEEecCCCCCCh--------------HHHHHHHH----HcCCCEEEEcCccccccccccCCCccccccccCCCCccc
Q 039280 173 NRIAVVGDLGLTYNT--------------TTTVAHLM----SNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQ 234 (487)
Q Consensus 173 ~~f~v~gD~~~~~~~--------------~~~l~~l~----~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~ 234 (487)
-+.++++|+|.+... .++++++. +.+||.++++||+..... .
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~-----~--------------- 74 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFK-----K--------------- 74 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccC-----C---------------
Confidence 367899999987421 13455443 357999999999995311 0
Q ss_pred chhhHHHHHHHHhhhccccCCCEEEecCCcccc
Q 039280 235 ETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIE 267 (487)
Q Consensus 235 ~~y~~~w~~~~~~~~~l~~~~P~~~v~GNHD~~ 267 (487)
...|..+.+.++.+ ..+++.++||||..
T Consensus 75 ---~~~~~~~~~~l~~~--~~~v~~V~GNHD~~ 102 (225)
T TIGR00024 75 ---GLEWRFIREFIEVT--FRDLILIRGNHDAL 102 (225)
T ss_pred ---hHHHHHHHHHHHhc--CCcEEEECCCCCCc
Confidence 01233344444443 35899999999963
|
Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal. |
| >PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.032 Score=61.69 Aligned_cols=46 Identities=22% Similarity=0.153 Sum_probs=26.6
Q ss_pred CCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHH-cCCcEEEeCccccc
Q 039280 335 EVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYY-YGVDIVFNGHVHAY 386 (487)
Q Consensus 335 ~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~-~~VdlvlsGH~H~y 386 (487)
....-+|++.|............+ +.... +.+ -+||++|.||+|..
T Consensus 217 ~gaDvII~LsH~G~~~d~~~~~ae-----n~~~~-l~~v~gID~Il~GHsH~~ 263 (649)
T PRK09420 217 KGADIVVAIPHSGISADPYKAMAE-----NSVYY-LSEVPGIDAIMFGHSHAV 263 (649)
T ss_pred cCCCEEEEEecCCcCCCCcccccc-----chhHH-HhcCCCCCEEEeCCCCcc
Confidence 346679999998764321000011 11111 233 47999999999975
|
|
| >TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.042 Score=60.60 Aligned_cols=45 Identities=24% Similarity=0.146 Sum_probs=26.6
Q ss_pred CCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHH-cCCcEEEeCccccc
Q 039280 336 VTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYY-YGVDIVFNGHVHAY 386 (487)
Q Consensus 336 ~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~-~~VdlvlsGH~H~y 386 (487)
...-+|++.|............++ .. ..+.+ -+||++|.||+|..
T Consensus 195 gaDvII~LsH~G~~~d~~~~~~en-----~~-~~l~~v~gID~Il~GHsH~~ 240 (626)
T TIGR01390 195 GADIIVALAHSGISADPYQPGAEN-----SA-YYLTKVPGIDAVLFGHSHAV 240 (626)
T ss_pred CCCEEEEEeccCcCCCccccccch-----HH-HHHhcCCCCCEEEcCCCCcc
Confidence 466799999987643210000111 11 12333 37999999999975
|
2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a |
| >COG1692 Calcineurin-like phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.19 Score=47.83 Aligned_cols=188 Identities=16% Similarity=0.223 Sum_probs=101.7
Q ss_pred cEEEEEecCCCCCChHHH---HHHHHH-cCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhh
Q 039280 173 NRIAVVGDLGLTYNTTTT---VAHLMS-NHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYM 248 (487)
Q Consensus 173 ~~f~v~gD~~~~~~~~~~---l~~l~~-~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~ 248 (487)
+|++++||+=.......+ +..+++ .++||||..|-.+-. |..- .|+.+..++
T Consensus 1 mriLfiGDvvGk~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENaa~------G~Gi------------------t~k~y~~l~ 56 (266)
T COG1692 1 MRILFIGDVVGKPGRKAVKEHLPQLKSKYKIDFVIVNGENAAG------GFGI------------------TEKIYKELL 56 (266)
T ss_pred CeEEEEecccCcchHHHHHHHhHHHHHhhcCcEEEEcCccccC------CcCC------------------CHHHHHHHH
Confidence 589999999665443333 334443 489999999998842 3210 123333333
Q ss_pred hccccCCCEEEecCCcccccCccchhhHHhhcccCCCCCCCC-CCCcceEEEEeCCEEEEEEcC--cccCC-CChHHHHH
Q 039280 249 QPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESG-SSSSLYYSFNAGGIHFVMLSA--YIDYD-KSSDQYKW 324 (487)
Q Consensus 249 ~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~-~~~~~yYsf~~g~v~fi~Ldt--~~~~~-~~~~Q~~W 324 (487)
+. .+- +++.|||=+....- ..|..-..++-.|.|-+. ..+..|.-|...+..+.+.|- ..... ....-.+=
T Consensus 57 ~~---G~d-viT~GNH~wd~~ei-~~~i~~~~~ilRP~N~p~~~~G~G~~~f~~ng~ki~V~Nl~Grv~m~~~~d~PF~~ 131 (266)
T COG1692 57 EA---GAD-VITLGNHTWDQKEI-LDFIDNADRILRPANYPDGTPGKGSRIFKINGKKLAVINLMGRVFMPPALDNPFKA 131 (266)
T ss_pred Hh---CCC-EEecccccccchHH-HHHhhcccceeccCCCCCCCCcceEEEEEeCCcEEEEEEeeccccCccccCCHHHH
Confidence 21 222 57889998753210 111111222334444322 335567777787766655553 22221 12333444
Q ss_pred HHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceecccccCCccCCCCcEE
Q 039280 325 LESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPVY 404 (487)
Q Consensus 325 L~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~p~~~~~~~~~g~vy 404 (487)
+++.|.+.+ ..++.+||-+|.-.-+ + .++| -++-+..|.+|+.=|+|.-.--. .+-++|+.|
T Consensus 132 ~d~l~~~~~-~~~~~iiVDFHAEtTS-------E----K~a~-g~yldGrvsavvGTHTHV~TaD~-----rIL~~GTay 193 (266)
T COG1692 132 ADKLLDEIK-LGTDLIIVDFHAETTS-------E----KNAF-GWYLDGRVSAVVGTHTHVPTADE-----RILPKGTAY 193 (266)
T ss_pred HHHHHHhCc-cCCceEEEEccccchh-------h----hhhh-heEEcCeEEEEEeccCccccccc-----eecCCCcEE
Confidence 666666543 3456799999953221 1 1111 22334578999999999643332 224688999
Q ss_pred EEe
Q 039280 405 ILV 407 (487)
Q Consensus 405 Iv~ 407 (487)
|+-
T Consensus 194 iTD 196 (266)
T COG1692 194 ITD 196 (266)
T ss_pred Eec
Confidence 863
|
|
| >cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.0046 Score=59.03 Aligned_cols=36 Identities=17% Similarity=0.226 Sum_probs=23.4
Q ss_pred EEEEecCCCCCCh-HHHHHHHHHc--------CCCEEEEcCcccc
Q 039280 175 IAVVGDLGLTYNT-TTTVAHLMSN--------HPDLLLLIGDLSY 210 (487)
Q Consensus 175 f~v~gD~~~~~~~-~~~l~~l~~~--------~pdfvl~~GDl~y 210 (487)
+.++||+|..... .+.++++... ..|.++++||++.
T Consensus 1 ~~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~ID 45 (222)
T cd07413 1 YDFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLID 45 (222)
T ss_pred CEEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccC
Confidence 3689999987432 2233333211 3579999999995
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of |
| >PRK09968 serine/threonine-specific protein phosphatase 2; Provisional | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.0035 Score=59.69 Aligned_cols=37 Identities=32% Similarity=0.444 Sum_probs=26.1
Q ss_pred EEEEEecCCCCCCh-HHHHHHHH-HcCCCEEEEcCcccc
Q 039280 174 RIAVVGDLGLTYNT-TTTVAHLM-SNHPDLLLLIGDLSY 210 (487)
Q Consensus 174 ~f~v~gD~~~~~~~-~~~l~~l~-~~~pdfvl~~GDl~y 210 (487)
|++++||+|..... .++++.+. ..+.|.++++||++.
T Consensus 16 ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vd 54 (218)
T PRK09968 16 HIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNID 54 (218)
T ss_pred eEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcC
Confidence 89999999976432 22333332 236799999999995
|
|
| >PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.15 Score=49.00 Aligned_cols=188 Identities=16% Similarity=0.192 Sum_probs=89.1
Q ss_pred EEEecCCCCCChH---HHHHHHHH-cCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhhhcc
Q 039280 176 AVVGDLGLTYNTT---TTVAHLMS-NHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYMQPL 251 (487)
Q Consensus 176 ~v~gD~~~~~~~~---~~l~~l~~-~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~~~l 251 (487)
+++||+=...... ..|.+|.+ .++||||..|..+-. |..- . +...+++++.
T Consensus 1 LfiGDIvG~~Gr~~v~~~Lp~L~~~~~~DfVIaNgENaa~------G~Gi------------t---~~~~~~L~~~---- 55 (253)
T PF13277_consen 1 LFIGDIVGKPGRRAVKEHLPELKEEYGIDFVIANGENAAG------GFGI------------T---PKIAEELFKA---- 55 (253)
T ss_dssp EEE-EBBCHHHHHHHHHHHHHHGG--G-SEEEEE-TTTTT------TSS-----------------HHHHHHHHHH----
T ss_pred CeEEecCCHHHHHHHHHHHHHHHhhcCCCEEEECCcccCC------CCCC------------C---HHHHHHHHhc----
Confidence 4678874432222 22344443 489999999999842 3211 0 1222222222
Q ss_pred ccCCCEEEecCCcccccCccchhhHHhhc---ccCCCCCCCC-CCCcceEEEEeCCEEEEEEcC--cccCCCChHHHHHH
Q 039280 252 VSNVPTMVIEGEHEIERQAENQTFAAYSS---RFAFPSEESG-SSSSLYYSFNAGGIHFVMLSA--YIDYDKSSDQYKWL 325 (487)
Q Consensus 252 ~~~~P~~~v~GNHD~~~~~~~~~~~~y~~---~f~~P~~~~~-~~~~~yYsf~~g~v~fi~Ldt--~~~~~~~~~Q~~WL 325 (487)
.+- ..+.|||=+... ....|.. +.-.|.|-+. ..+..|..++.++..+-++|- .........-+.-+
T Consensus 56 --GvD-viT~GNH~wdkk----ei~~~i~~~~~ilRPaN~p~~~pG~G~~i~~~~g~kv~ViNl~Gr~fm~~~~~PF~~~ 128 (253)
T PF13277_consen 56 --GVD-VITMGNHIWDKK----EIFDFIDKEPRILRPANYPPGTPGRGYRIFEKNGKKVAVINLMGRVFMPPIDCPFRAA 128 (253)
T ss_dssp --T-S-EEE--TTTTSST----THHHHHHH-SSEE--TTS-TT-SSBSEEEEEETTEEEEEEEEE--TTS---S-HHHHH
T ss_pred --CCC-EEecCcccccCc----HHHHHHhcCCCcEECCCCCCCCCcCcEEEEEECCEEEEEEECcccccCCCCCChHHHH
Confidence 233 468899988632 2333322 2334544332 456778899999877777663 32222222334445
Q ss_pred HHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceecccccCCccCCCCcEEE
Q 039280 326 ESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPVYI 405 (487)
Q Consensus 326 ~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~p~~~~~~~~~g~vyI 405 (487)
++.|++. +.+++.+||=+|.=. .....+| -.+-+-+|.+|+.=|+|.-.-- ..+-|.|+-||
T Consensus 129 d~~l~~l-~~~~~~iiVDFHAEa-----------TSEK~A~-g~~lDGrvsaV~GTHTHVqTaD-----erILp~GTaYi 190 (253)
T PF13277_consen 129 DRLLEEL-KEETDIIIVDFHAEA-----------TSEKQAM-GWYLDGRVSAVVGTHTHVQTAD-----ERILPGGTAYI 190 (253)
T ss_dssp HHHHHH------SEEEEEEE-S------------HHHHHHH-HHHHBTTBSEEEEESSSS-BS-------EE-TTS-EEE
T ss_pred HHHHHhc-cccCCEEEEEeecCc-----------HHHHHHH-HHHhCCcEEEEEeCCCCccCch-----hhccCCCCEEE
Confidence 5555543 245678999999422 1112222 3455668999999999964322 22346899998
Q ss_pred Ee-CCcccc
Q 039280 406 LV-GDGGNV 413 (487)
Q Consensus 406 v~-G~gG~~ 413 (487)
+- |.-|..
T Consensus 191 TDvGMtG~~ 199 (253)
T PF13277_consen 191 TDVGMTGPY 199 (253)
T ss_dssp S---EBEES
T ss_pred ecCccccCc
Confidence 63 444443
|
|
| >PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes [] | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.036 Score=43.33 Aligned_cols=76 Identities=29% Similarity=0.369 Sum_probs=46.7
Q ss_pred CCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCcE
Q 039280 49 QPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGII 128 (487)
Q Consensus 49 ~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~ 128 (487)
.|+.+++.-.+ ++++.|+|...... +. ....-.|+|....+..... .... ..-.
T Consensus 2 ~P~~l~v~~~~-~~sv~v~W~~~~~~-~~-------~~~~y~v~~~~~~~~~~~~----~~~~-------------~~~~ 55 (85)
T PF00041_consen 2 APENLSVSNIS-PTSVTVSWKPPSSG-NG-------PITGYRVEYRSVNSTSDWQ----EVTV-------------PGNE 55 (85)
T ss_dssp SSEEEEEEEEC-SSEEEEEEEESSST-SS-------SESEEEEEEEETTSSSEEE----EEEE-------------ETTS
T ss_pred cCcCeEEEECC-CCEEEEEEECCCCC-CC-------CeeEEEEEEEecccceeee----eeee-------------eeee
Confidence 47888887764 78999999998511 11 1123456665554332111 1101 1112
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 039280 129 HHVLITGLQPNTLYEYECGDPS 150 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~~ 150 (487)
+.++|++|+|+|.|.++|..-.
T Consensus 56 ~~~~i~~L~p~t~Y~~~v~a~~ 77 (85)
T PF00041_consen 56 TSYTITGLQPGTTYEFRVRAVN 77 (85)
T ss_dssp SEEEEESCCTTSEEEEEEEEEE
T ss_pred eeeeeccCCCCCEEEEEEEEEe
Confidence 3788999999999999997543
|
They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A .... |
| >COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion] | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.019 Score=55.35 Aligned_cols=142 Identities=20% Similarity=0.310 Sum_probs=85.4
Q ss_pred hhccccCCCEEEecCCcccccCccc-------hhhHHhhccc------CCCCCCC--CCCCcceEEEEeCCEEEEEEcCc
Q 039280 248 MQPLVSNVPTMVIEGEHEIERQAEN-------QTFAAYSSRF------AFPSEES--GSSSSLYYSFNAGGIHFVMLSAY 312 (487)
Q Consensus 248 ~~~l~~~~P~~~v~GNHD~~~~~~~-------~~~~~y~~~f------~~P~~~~--~~~~~~yYsf~~g~v~fi~Ldt~ 312 (487)
..++.-.+|+++-.||||...+.-. .+...|...+ ..|.-.. -..-..-||++.|++|.+-+-+.
T Consensus 164 vG~~h~H~PvYvGlgnhdldq~gpph~~DWyRrElrdyve~~Hr~~vf~Kppvp~atYd~l~d~ySwdwgglhlvh~hrf 243 (392)
T COG5555 164 VGNIHMHYPVYVGLGNHDLDQKGPPHSLDWYRRELRDYVENYHRSDVFWKPPVPPATYDQLKDRYSWDWGGLHLVHYHRF 243 (392)
T ss_pred CCCceeeeeeEeccCchhhcccCCCCchhHHHHHHHHHHHhhcCcCcccCCCCCcccccccchheeccccceeEEEEeee
Confidence 3444456999999999999754221 1122222211 1111111 12334568999999999888664
Q ss_pred ccCC-C-ChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcch----------------hHHHHHHHHHHHHHcC
Q 039280 313 IDYD-K-SSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYRE----------------VECMRVEMEDLLYYYG 374 (487)
Q Consensus 313 ~~~~-~-~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~----------------~~~~r~~l~~l~~~~~ 374 (487)
..-. . ...-+-||+.+|........| ++++.|.-+-.-....++. ....|..|...++-|+
T Consensus 244 ~Gd~~~ga~sslpwlk~dl~~~aadgrp-v~LfqhyGwdtfsteawdpAsrT~Dd~Gsgaphww~a~er~all~~lqGYN 322 (392)
T COG5555 244 IGDAEPGANSSLPWLKVDLIYSAADGRP-VYLFQHYGWDTFSTEAWDPASRTLDDTGSGAPHWWPAPERGALLFFLQGYN 322 (392)
T ss_pred ccccCCCccccCcceeccceeeccCCCc-eeehhhhCccceeccccCchhcccccCCCCCCCCCCCCCcchHHHhhcCce
Confidence 3211 1 234567999999875444555 8889997654321111110 1123677888889999
Q ss_pred CcEEEeCccccceecc
Q 039280 375 VDIVFNGHVHAYERSN 390 (487)
Q Consensus 375 VdlvlsGH~H~yeR~~ 390 (487)
|.-.+.||.|...-.+
T Consensus 323 vvg~fhGhkhd~~may 338 (392)
T COG5555 323 VVGTFHGHKHDFNMAY 338 (392)
T ss_pred eEEeccccccccceee
Confidence 9999999999874443
|
|
| >cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.0088 Score=58.30 Aligned_cols=64 Identities=22% Similarity=0.335 Sum_probs=39.3
Q ss_pred EEEecCCCCCCh-HHHHHHHHH-cCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhhhcccc
Q 039280 176 AVVGDLGLTYNT-TTTVAHLMS-NHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYMQPLVS 253 (487)
Q Consensus 176 ~v~gD~~~~~~~-~~~l~~l~~-~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~~~l~~ 253 (487)
.++||+|..... .++++++.. .+.|.++++||++.. |.. . .+..+.+..+.
T Consensus 2 yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdR------Gp~------------------s--~evl~~l~~l~- 54 (257)
T cd07422 2 YAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNR------GPD------------------S--LETLRFVKSLG- 54 (257)
T ss_pred EEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCC------CcC------------------H--HHHHHHHHhcC-
Confidence 589999986432 233444432 257999999999952 221 0 12233333332
Q ss_pred CCCEEEecCCcccc
Q 039280 254 NVPTMVIEGEHEIE 267 (487)
Q Consensus 254 ~~P~~~v~GNHD~~ 267 (487)
..+..+.||||..
T Consensus 55 -~~v~~VlGNHD~~ 67 (257)
T cd07422 55 -DSAKTVLGNHDLH 67 (257)
T ss_pred -CCeEEEcCCchHH
Confidence 3678999999974
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa |
| >cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.0075 Score=57.33 Aligned_cols=35 Identities=20% Similarity=0.280 Sum_probs=23.3
Q ss_pred EEEecCCCCCCh-HHHHHHHHHcCCCEEEEcCcccc
Q 039280 176 AVVGDLGLTYNT-TTTVAHLMSNHPDLLLLIGDLSY 210 (487)
Q Consensus 176 ~v~gD~~~~~~~-~~~l~~l~~~~pdfvl~~GDl~y 210 (487)
.++||+|..... .+.++.+.....|.+|++||++.
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vd 36 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVD 36 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeC
Confidence 379999975322 12233333347899999999995
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate |
| >cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.1 Score=50.31 Aligned_cols=128 Identities=13% Similarity=0.159 Sum_probs=64.1
Q ss_pred CCCEEEecCCcccccCccchhhHHh---hcccCCCCCCCCC---CCcceEEEEeCCE--EEEEEcCcccCC---------
Q 039280 254 NVPTMVIEGEHEIERQAENQTFAAY---SSRFAFPSEESGS---SSSLYYSFNAGGI--HFVMLSAYIDYD--------- 316 (487)
Q Consensus 254 ~~P~~~v~GNHD~~~~~~~~~~~~y---~~~f~~P~~~~~~---~~~~yYsf~~g~v--~fi~Ldt~~~~~--------- 316 (487)
.+-++.+.+||+++... +.+... .+...++..+.+. ....+..++.+++ .|+.+.+.....
T Consensus 77 G~d~~tlaNNH~fD~G~--~gl~~t~~~l~~~~i~~~g~~~~~~~~~~~~i~~~~g~kVg~ig~t~~~~~~~~~~~~~~~ 154 (239)
T cd07381 77 GFDVVSLANNHTLDYGE--EGLLDTLDALDEAGIAHAGAGRNLEEARRPAILEVNGIKVAFLAYTYGTNGIPLAAGARPG 154 (239)
T ss_pred CCCEEEcccccccccch--HHHHHHHHHHHHcCCceeECCCCHHHhcCcEEEEECCEEEEEEEEECCCCCCcCcccCCcc
Confidence 44555555699997432 223222 1222333322211 1134556778874 555554422110
Q ss_pred -CChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceec
Q 039280 317 -KSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERS 389 (487)
Q Consensus 317 -~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~ 389 (487)
......+-+++.+++.+. +...+||+.|-........ . .....+...+.+.++|+++.||.|..+-.
T Consensus 155 ~~~~~~~~~~~~~i~~lr~-~~D~vIv~~H~G~e~~~~p----~-~~~~~la~~l~~~G~D~IiG~H~Hv~q~~ 222 (239)
T cd07381 155 GVNPLDLERIAADIAEAKK-KADIVIVSLHWGVEYSYYP----T-PEQRELARALIDAGADLVIGHHPHVLQGI 222 (239)
T ss_pred ccCccCHHHHHHHHHHHhh-cCCEEEEEecCcccCCCCC----C-HHHHHHHHHHHHCCCCEEEcCCCCcCCCe
Confidence 011112335555554432 3678999999654221111 1 12234444555679999999999976543
|
CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal |
| >TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.014 Score=57.36 Aligned_cols=38 Identities=26% Similarity=0.351 Sum_probs=26.8
Q ss_pred cEEEEEecCCCCCCh-HHHHHHHH-HcCCCEEEEcCcccc
Q 039280 173 NRIAVVGDLGLTYNT-TTTVAHLM-SNHPDLLLLIGDLSY 210 (487)
Q Consensus 173 ~~f~v~gD~~~~~~~-~~~l~~l~-~~~pdfvl~~GDl~y 210 (487)
+++.++||+|..... .+.++++. +...|-++++||++.
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVd 40 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVA 40 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccC
Confidence 357899999987542 34455553 235689999999995
|
Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. |
| >cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.016 Score=57.04 Aligned_cols=37 Identities=22% Similarity=0.305 Sum_probs=25.6
Q ss_pred EEEEEecCCCCCCh-HHHHHHHHHc------CCCEEEEcCcccc
Q 039280 174 RIAVVGDLGLTYNT-TTTVAHLMSN------HPDLLLLIGDLSY 210 (487)
Q Consensus 174 ~f~v~gD~~~~~~~-~~~l~~l~~~------~pdfvl~~GDl~y 210 (487)
+++++||+|..... .++++.+.+. ..+.+|++||++.
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVD 46 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCD 46 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCC
Confidence 68999999987543 3334444322 3568999999995
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol |
| >smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.18 Score=48.65 Aligned_cols=59 Identities=19% Similarity=0.242 Sum_probs=34.5
Q ss_pred HHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceec
Q 039280 325 LESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERS 389 (487)
Q Consensus 325 L~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~ 389 (487)
+++.+++.+ ++...+||+.|--.-..... ... ...+..-+.+.++|+++.||.|..+..
T Consensus 162 i~~~i~~lr-~~~D~vIv~~H~G~e~~~~p----~~~-~~~~A~~l~~~G~DvIiG~H~H~~~~~ 220 (239)
T smart00854 162 ILADIARAR-KKADVVIVSLHWGVEYQYEP----TDE-QRELAHALIDAGADVVIGHHPHVLQPI 220 (239)
T ss_pred HHHHHHHHh-ccCCEEEEEecCccccCCCC----CHH-HHHHHHHHHHcCCCEEEcCCCCcCCce
Confidence 444444432 24678999999665322111 111 233434444479999999999987644
|
This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein. |
| >COG1407 Predicted ICC-like phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.053 Score=51.65 Aligned_cols=72 Identities=24% Similarity=0.416 Sum_probs=45.2
Q ss_pred EEEEEecCCCCCCh--------------HH---HHHHH-HHcCCCEEEEcCccccccccccCCCccccccccCCCCcccc
Q 039280 174 RIAVVGDLGLTYNT--------------TT---TVAHL-MSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQE 235 (487)
Q Consensus 174 ~f~v~gD~~~~~~~--------------~~---~l~~l-~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~ 235 (487)
+.++++|+|.+... .+ .++++ .+.+|+-++.+||+-.+- +.
T Consensus 21 ~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~-----~~---------------- 79 (235)
T COG1407 21 RTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEF-----GK---------------- 79 (235)
T ss_pred cEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCcccccc-----Cc----------------
Confidence 68999999998532 11 23322 346999999999998531 11
Q ss_pred hhhHHHHHHHHhhhccccCCCEEEecCCcccc
Q 039280 236 TYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIE 267 (487)
Q Consensus 236 ~y~~~w~~~~~~~~~l~~~~P~~~v~GNHD~~ 267 (487)
.....|+....+++.+... -++.+.||||-+
T Consensus 80 ~~~~e~~~~~~f~~~~~~~-evi~i~GNHD~~ 110 (235)
T COG1407 80 SLRQEKEEVREFLELLDER-EVIIIRGNHDNG 110 (235)
T ss_pred cccccHHHHHHHHHHhccC-cEEEEeccCCCc
Confidence 0123455444444444332 499999999975
|
|
| >PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria | Back alignment and domain information |
|---|
Probab=94.10 E-value=0.59 Score=45.34 Aligned_cols=128 Identities=12% Similarity=0.135 Sum_probs=71.1
Q ss_pred CCCEEEecCCcccccCccchhhH---HhhcccCCCCCCCCC---CCcceEEEEeCCEEEEEEcCcccC---C--------
Q 039280 254 NVPTMVIEGEHEIERQAENQTFA---AYSSRFAFPSEESGS---SSSLYYSFNAGGIHFVMLSAYIDY---D-------- 316 (487)
Q Consensus 254 ~~P~~~v~GNHD~~~~~~~~~~~---~y~~~f~~P~~~~~~---~~~~yYsf~~g~v~fi~Ldt~~~~---~-------- 316 (487)
.+-++.+.-||.++... +.+. ...+...++..+.+. .......++.+++++-+|...... .
T Consensus 75 G~d~vslANNH~~D~G~--~gl~~Tl~~L~~~gi~~~Gag~~~~~a~~p~i~~~~g~kia~l~~t~~~~~~~~~~~~~~~ 152 (250)
T PF09587_consen 75 GFDVVSLANNHIFDYGE--EGLLDTLEALDKAGIPYVGAGRNLEEARRPAIIEVNGVKIAFLGYTDGENGYSSANGNRPY 152 (250)
T ss_pred CCCEEEecCCCCccccH--HHHHHHHHHHHHCCCcEeECcCChHHhcCeEEEEECCEEEEEEEEEcCCCCCccccccccc
Confidence 55677777899886432 2222 122233333322111 122345577788666555421100 0
Q ss_pred ------------CChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccc
Q 039280 317 ------------KSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVH 384 (487)
Q Consensus 317 ------------~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H 384 (487)
....+.+.+++++++++ ++..++||+.|--.-.... ... ....+...+-+.|+|+|+.+|.|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~i~~~i~~~r-~~~D~vIv~~HwG~e~~~~----p~~-~q~~~a~~lidaGaDiIiG~HpH 226 (250)
T PF09587_consen 153 GFSYRPDKAGLNPNRPGIERIKEDIREAR-KKADVVIVSLHWGIEYENY----PTP-EQRELARALIDAGADIIIGHHPH 226 (250)
T ss_pred cccccccccccccccchHHHHHHHHHHHh-cCCCEEEEEeccCCCCCCC----CCH-HHHHHHHHHHHcCCCEEEeCCCC
Confidence 01234477888888765 5678899999964321111 112 23445455555899999999999
Q ss_pred cceec
Q 039280 385 AYERS 389 (487)
Q Consensus 385 ~yeR~ 389 (487)
..+-.
T Consensus 227 v~q~~ 231 (250)
T PF09587_consen 227 VIQPV 231 (250)
T ss_pred cccce
Confidence 87655
|
Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein []. |
| >cd07416 MPP_PP2B PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=92.87 E-value=0.13 Score=51.62 Aligned_cols=23 Identities=9% Similarity=0.041 Sum_probs=19.7
Q ss_pred HHHHHHHHHHcCCcEEEeCcccc
Q 039280 363 RVEMEDLLYYYGVDIVFNGHVHA 385 (487)
Q Consensus 363 r~~l~~l~~~~~VdlvlsGH~H~ 385 (487)
.+.+++.+++++.++++=||.=.
T Consensus 222 ~~~~~~Fl~~n~l~~iiR~He~~ 244 (305)
T cd07416 222 YRAVCEFLQKNNLLSIIRAHEAQ 244 (305)
T ss_pred HHHHHHHHHHcCCeEEEEecccc
Confidence 46788999999999999999843
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G |
| >cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=92.76 E-value=0.18 Score=50.81 Aligned_cols=23 Identities=13% Similarity=0.173 Sum_probs=19.8
Q ss_pred HHHHHHHHHHcCCcEEEeCcccc
Q 039280 363 RVEMEDLLYYYGVDIVFNGHVHA 385 (487)
Q Consensus 363 r~~l~~l~~~~~VdlvlsGH~H~ 385 (487)
.+.+...+++++.++++=||.-.
T Consensus 253 ~~~~~~Fl~~n~l~~IIR~He~v 275 (321)
T cd07420 253 PDVTSKVLQKHGLSLLIRSHECK 275 (321)
T ss_pred HHHHHHHHHHCCCcEEEEcChhh
Confidence 56788999999999999999853
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all |
| >KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.66 E-value=1.5 Score=47.04 Aligned_cols=59 Identities=19% Similarity=0.224 Sum_probs=38.0
Q ss_pred hHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHc-CCcE-EEeCcccccee
Q 039280 319 SDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYY-GVDI-VFNGHVHAYER 388 (487)
Q Consensus 319 ~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~-~Vdl-vlsGH~H~yeR 388 (487)
-.|.+|-.+.++. ....-+|++.|.|.-.. ......+..+...+ ++++ ||-||.|....
T Consensus 211 i~~~~~~~~m~~~---~~idlii~lgH~~~~~~--------~e~~~~~~~ir~~~p~t~IqviGGHshird~ 271 (602)
T KOG4419|consen 211 ITQSEWEQDMVNT---TDIDLIIALGHSPVRDD--------DEWKSLHAEIRKVHPNTPIQVIGGHSHIRDF 271 (602)
T ss_pred HhccchHHHHhhc---cCccEEEEecccccccc--------hhhhhHHHHHhhhCCCCceEEECchhhhhhh
Confidence 4567887777776 34556899999986431 11112444455555 5788 99999997443
|
|
| >smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Probab=92.57 E-value=0.17 Score=49.79 Aligned_cols=21 Identities=10% Similarity=0.295 Sum_probs=19.0
Q ss_pred HHHHHHHHHHcCCcEEEeCcc
Q 039280 363 RVEMEDLLYYYGVDIVFNGHV 383 (487)
Q Consensus 363 r~~l~~l~~~~~VdlvlsGH~ 383 (487)
.+.+.+.++++++++++-||.
T Consensus 200 ~~~~~~Fl~~n~l~~iiR~He 220 (271)
T smart00156 200 PDAVDEFLKKNNLKLIIRAHQ 220 (271)
T ss_pred HHHHHHHHHHCCCeEEEecCc
Confidence 467889999999999999997
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. |
| >KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=92.57 E-value=0.4 Score=50.47 Aligned_cols=41 Identities=34% Similarity=0.451 Sum_probs=31.9
Q ss_pred CcEEEEEecCCCCCC---------hHHHHHHHH----HcCCCEEEEcCcccccc
Q 039280 172 PNRIAVVGDLGLTYN---------TTTTVAHLM----SNHPDLLLLIGDLSYAD 212 (487)
Q Consensus 172 ~~~f~v~gD~~~~~~---------~~~~l~~l~----~~~pdfvl~~GDl~y~d 212 (487)
.+||++..|.|.++. ...++++|+ +++.||||..|||...+
T Consensus 13 tirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeN 66 (646)
T KOG2310|consen 13 TIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHEN 66 (646)
T ss_pred ceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccC
Confidence 699999999999864 234455543 46899999999999753
|
|
| >cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=91.82 E-value=0.22 Score=49.58 Aligned_cols=23 Identities=13% Similarity=0.225 Sum_probs=20.0
Q ss_pred HHHHHHHHHHcCCcEEEeCcccc
Q 039280 363 RVEMEDLLYYYGVDIVFNGHVHA 385 (487)
Q Consensus 363 r~~l~~l~~~~~VdlvlsGH~H~ 385 (487)
.+.++..+++.+.++++=||.-.
T Consensus 222 ~~~~~~Fl~~n~l~~iiR~He~~ 244 (293)
T cd07414 222 KDVVAKFLNKHDLDLICRAHQVV 244 (293)
T ss_pred HHHHHHHHHHcCCeEEEECCccc
Confidence 46788999999999999999854
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg |
| >cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=91.51 E-value=0.23 Score=49.23 Aligned_cols=23 Identities=13% Similarity=0.228 Sum_probs=20.1
Q ss_pred HHHHHHHHHHcCCcEEEeCcccc
Q 039280 363 RVEMEDLLYYYGVDIVFNGHVHA 385 (487)
Q Consensus 363 r~~l~~l~~~~~VdlvlsGH~H~ 385 (487)
.+.+++.+++.+.++++=||.-.
T Consensus 214 ~~~~~~Fl~~n~l~~iiR~He~~ 236 (285)
T cd07415 214 QDVVEEFNHNNGLTLICRAHQLV 236 (285)
T ss_pred HHHHHHHHHHCCCeEEEEcCccc
Confidence 46788999999999999999854
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2 |
| >PTZ00239 serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Probab=90.80 E-value=0.33 Score=48.51 Aligned_cols=23 Identities=4% Similarity=0.102 Sum_probs=20.0
Q ss_pred HHHHHHHHHHcCCcEEEeCcccc
Q 039280 363 RVEMEDLLYYYGVDIVFNGHVHA 385 (487)
Q Consensus 363 r~~l~~l~~~~~VdlvlsGH~H~ 385 (487)
.+.+++.+++.+.++++=||.-.
T Consensus 215 ~~~~~~Fl~~n~l~~iiR~He~~ 237 (303)
T PTZ00239 215 AKVTKEFCRLNDLTLICRAHQLV 237 (303)
T ss_pred HHHHHHHHHHCCCcEEEEcChhh
Confidence 46888999999999999999854
|
|
| >cd07418 MPP_PP7 PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=90.77 E-value=0.41 Score=49.16 Aligned_cols=21 Identities=14% Similarity=0.210 Sum_probs=19.3
Q ss_pred HHHHHHHHHHcCCcEEEeCcc
Q 039280 363 RVEMEDLLYYYGVDIVFNGHV 383 (487)
Q Consensus 363 r~~l~~l~~~~~VdlvlsGH~ 383 (487)
.+.++..|++++.++++=||.
T Consensus 273 ~~~~~~FL~~n~l~~IIRsHe 293 (377)
T cd07418 273 PDCTEEFLEKNNLKLIIRSHE 293 (377)
T ss_pred HHHHHHHHHHcCCcEEEECCC
Confidence 468889999999999999999
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, |
| >PTZ00480 serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.12 E-value=0.43 Score=48.02 Aligned_cols=23 Identities=13% Similarity=0.163 Sum_probs=20.2
Q ss_pred HHHHHHHHHHcCCcEEEeCcccc
Q 039280 363 RVEMEDLLYYYGVDIVFNGHVHA 385 (487)
Q Consensus 363 r~~l~~l~~~~~VdlvlsGH~H~ 385 (487)
.+.++..+++++.++++=||.-.
T Consensus 231 ~~~~~~Fl~~n~l~~IiR~Hq~v 253 (320)
T PTZ00480 231 QEIVQVFLKKHELDLICRAHQVV 253 (320)
T ss_pred HHHHHHHHHhCCCcEEEEcCccc
Confidence 57888999999999999999854
|
|
| >PTZ00244 serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Probab=89.23 E-value=0.18 Score=50.16 Aligned_cols=23 Identities=17% Similarity=0.275 Sum_probs=19.9
Q ss_pred HHHHHHHHHHcCCcEEEeCcccc
Q 039280 363 RVEMEDLLYYYGVDIVFNGHVHA 385 (487)
Q Consensus 363 r~~l~~l~~~~~VdlvlsGH~H~ 385 (487)
.+.++..+++.+.++++=||.-.
T Consensus 224 ~~~~~~Fl~~n~l~~iiR~Hq~~ 246 (294)
T PTZ00244 224 EDIVNDFLDMVDMDLIVRAHQVM 246 (294)
T ss_pred HHHHHHHHHHcCCcEEEEcCccc
Confidence 46788999999999999999843
|
|
| >cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=87.75 E-value=0.85 Score=45.90 Aligned_cols=23 Identities=9% Similarity=0.068 Sum_probs=19.9
Q ss_pred HHHHHHHHHHcCCcEEEeCcccc
Q 039280 363 RVEMEDLLYYYGVDIVFNGHVHA 385 (487)
Q Consensus 363 r~~l~~l~~~~~VdlvlsGH~H~ 385 (487)
.+.+.+.+++.+.++++-||.=.
T Consensus 233 ~~~~~~Fl~~n~l~~iiR~He~~ 255 (316)
T cd07417 233 PDVTKRFLEENNLEYIIRSHEVK 255 (316)
T ss_pred HHHHHHHHHHcCCcEEEECCccc
Confidence 46778999999999999999853
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel |
| >cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=87.52 E-value=1.1 Score=45.17 Aligned_cols=21 Identities=10% Similarity=0.189 Sum_probs=19.0
Q ss_pred HHHHHHHHHHcCCcEEEeCcc
Q 039280 363 RVEMEDLLYYYGVDIVFNGHV 383 (487)
Q Consensus 363 r~~l~~l~~~~~VdlvlsGH~ 383 (487)
.+++...+++++.++++=||.
T Consensus 242 ~~~~~~Fl~~n~l~~iiRgHe 262 (311)
T cd07419 242 PDRVHRFLEENDLQMIIRAHE 262 (311)
T ss_pred HHHHHHHHHHCCCeEEEEech
Confidence 467889999999999999998
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most |
| >KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=87.47 E-value=2.6 Score=48.63 Aligned_cols=101 Identities=18% Similarity=0.200 Sum_probs=53.1
Q ss_pred cCCCCCCCC-CceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCC
Q 039280 41 NNAQGEGFQ-PEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDG 119 (487)
Q Consensus 41 ~~~~~~~~~-P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g 119 (487)
+...|.+.. |..|.|.... .++++|+|.+.....- .....-|.+.-.++........+ +. .|
T Consensus 609 ~Tlsd~PsaPP~Nl~lev~s-StsVrVsW~pP~~~t~----------ng~itgYkIRy~~~~~~~~~~~t-~v-----~~ 671 (1381)
T KOG4221|consen 609 RTLSDVPSAPPQNLSLEVVS-STSVRVSWLPPPSETQ----------NGQITGYKIRYRKLSREDEVNET-VV-----KG 671 (1381)
T ss_pred EeccCCCCCCCcceEEEecC-CCeEEEEccCCCcccc----------cceEEEEEEEecccCccccccee-ec-----cc
Confidence 444444444 4558887766 7899999988754210 11222233321111111111100 00 01
Q ss_pred CCccccCcEEEEEeCCCCCCCEEEEEEecCC---CCCcCceEEEEcCCC
Q 039280 120 LQNYTSGIIHHVLITGLQPNTLYEYECGDPS---ISAMSSSHYFRTMPV 165 (487)
Q Consensus 120 ~~~~~~~~~h~v~l~gL~P~T~Y~Y~vg~~~---~~~~s~~~~F~T~p~ 165 (487)
....-.+++|+|+|.|.+||.... .+..|++.+|.|+-.
T Consensus 672 -------n~~~~l~~~Lep~T~Y~vrIsa~t~nGtGpaS~w~~aeT~~~ 713 (1381)
T KOG4221|consen 672 -------NTTQYLFNGLEPNTQYRVRISAMTVNGTGPASEWVSAETPES 713 (1381)
T ss_pred -------chhhhHhhcCCCCceEEEEEEEeccCCCCCcccceeccCccc
Confidence 111223578999999999995433 235778889988643
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=86.42 E-value=4.8 Score=44.82 Aligned_cols=38 Identities=32% Similarity=0.585 Sum_probs=30.9
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCcCceEEEEcCCC
Q 039280 128 IHHVLITGLQPNTLYEYECGDPSI---SAMSSSHYFRTMPV 165 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~~---~~~s~~~~F~T~p~ 165 (487)
..+|+|+||+|+|+|.+||...+. +..|....|.|.+.
T Consensus 497 ~~~~ti~gL~p~t~YvfqVRarT~aG~G~~S~~~~fqT~~~ 537 (996)
T KOG0196|consen 497 TTTATITGLKPGTVYVFQVRARTAAGYGPYSGKHEFQTLPS 537 (996)
T ss_pred cceEEeeccCCCcEEEEEEEEecccCCCCCCCceeeeecCc
Confidence 357999999999999999965432 36788999999886
|
|
| >cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin | Back alignment and domain information |
|---|
Probab=85.55 E-value=7.9 Score=29.27 Aligned_cols=22 Identities=32% Similarity=0.505 Sum_probs=18.4
Q ss_pred EEEEEeCCCCCCCEEEEEEecC
Q 039280 128 IHHVLITGLQPNTLYEYECGDP 149 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~ 149 (487)
...+.|.+|.|++.|.++|..-
T Consensus 56 ~~~~~i~~l~p~~~Y~~~v~a~ 77 (93)
T cd00063 56 ETSYTLTGLKPGTEYEFRVRAV 77 (93)
T ss_pred ccEEEEccccCCCEEEEEEEEE
Confidence 4578889999999999999653
|
Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. |
| >smart00060 FN3 Fibronectin type 3 domain | Back alignment and domain information |
|---|
Probab=83.22 E-value=8.8 Score=28.00 Aligned_cols=22 Identities=32% Similarity=0.519 Sum_probs=18.6
Q ss_pred EEEEEeCCCCCCCEEEEEEecC
Q 039280 128 IHHVLITGLQPNTLYEYECGDP 149 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~ 149 (487)
-+...|.+|+|++.|.++|..-
T Consensus 56 ~~~~~i~~L~~~~~Y~v~v~a~ 77 (83)
T smart00060 56 STSYTLTGLKPGTEYEFRVRAV 77 (83)
T ss_pred ccEEEEeCcCCCCEEEEEEEEE
Confidence 4678899999999999998643
|
One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. |
| >PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast | Back alignment and domain information |
|---|
Probab=82.66 E-value=0.97 Score=42.36 Aligned_cols=83 Identities=12% Similarity=0.288 Sum_probs=42.6
Q ss_pred EEEEecCCCCCCh--HHHHHHHH-----HcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhH---HHHHH
Q 039280 175 IAVVGDLGLTYNT--TTTVAHLM-----SNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQP---RWDYW 244 (487)
Q Consensus 175 f~v~gD~~~~~~~--~~~l~~l~-----~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~---~w~~~ 244 (487)
|++++|.+...+. .+.+.++. +.+|+.+|++|+++.......... .....+.. ....+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~------------~~~~~~~~~~~~~~~~ 68 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSG------------SVPDSYSFEEDFLKEL 68 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---------------HHCCHHHHHHHHC
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccc------------cccccccccHHHHHHH
Confidence 5788999887432 23344443 457999999999996422110000 00001111 11233
Q ss_pred HHhhhccccCCCEEEecCCcccccC
Q 039280 245 GRYMQPLVSNVPTMVIEGEHEIERQ 269 (487)
Q Consensus 245 ~~~~~~l~~~~P~~~v~GNHD~~~~ 269 (487)
.+.+..+...++++.+||+||....
T Consensus 69 ~~~~~~i~~~~~vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 69 DSFLESILPSTQVVLVPGPNDPTSS 93 (209)
T ss_dssp HHHHCCCHCCSEEEEE--TTCTT-S
T ss_pred HHHHhhcccccEEEEeCCCcccccc
Confidence 3445666678999999999998643
|
In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G. |
| >KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=81.19 E-value=2.1 Score=37.69 Aligned_cols=42 Identities=24% Similarity=0.417 Sum_probs=32.7
Q ss_pred HHHHHHHHHcCCcEEEeCccccceecccccCCccCCCCcEEEEeCCcccc
Q 039280 364 VEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDGGNV 413 (487)
Q Consensus 364 ~~l~~l~~~~~VdlvlsGH~H~yeR~~p~~~~~~~~~g~vyIv~G~gG~~ 413 (487)
+.|.-|-++..||+.++||+|.++-. .-+|-.||.-|++-..
T Consensus 97 ~sL~~LaRqldvDILl~G~Th~f~Ay--------e~eg~ffvnPGSaTGA 138 (183)
T KOG3325|consen 97 ESLALLARQLDVDILLTGHTHKFEAY--------EHEGKFFVNPGSATGA 138 (183)
T ss_pred HHHHHHHHhcCCcEEEeCCceeEEEE--------EeCCcEEeCCCcccCC
Confidence 45556667889999999999998877 3467788888887543
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 487 | ||||
| 1xzw_A | 426 | Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPL | 2e-49 | ||
| 1kbp_A | 432 | Kidney Bean Purple Acid Phosphatase Length = 432 | 4e-49 | ||
| 2qfp_A | 424 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 5e-49 | ||
| 4dsy_A | 426 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 5e-49 |
| >pdb|1XZW|A Chain A, Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPLEX Length = 426 | Back alignment and structure |
|
| >pdb|1KBP|A Chain A, Kidney Bean Purple Acid Phosphatase Length = 432 | Back alignment and structure |
|
| >pdb|2QFP|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Fluoride Length = 424 | Back alignment and structure |
|
| >pdb|4DSY|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Maybridge Fragment Cc24201 Length = 426 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 487 | |||
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 1e-103 | |
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 1e-102 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 2e-39 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 8e-29 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 1e-10 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 1e-09 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 1e-08 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 6e-05 |
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* Length = 424 | Back alignment and structure |
|---|
Score = 313 bits (804), Expect = e-103
Identities = 138/445 (31%), Positives = 197/445 (44%), Gaps = 93/445 (20%)
Query: 49 QPEQIFVSLSAR-YDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGY 107
P+Q+ ++ ++ ISW+T + E S V + ++ A+G
Sbjct: 18 APQQVHITQGDLVGRAMIISWVTMD------------EPGSSAVRYWSEKNGRKRIAKGK 65
Query: 108 SLVYNQLYPPDGLQNYTSGIIHHVLITGLQPNTLYEYECGDPSISAMSSSHYFRTMPVSG 167
Y NY+SG IHH I L+ NT Y YE G + F T P +G
Sbjct: 66 MSTYRFF-------NYSSGFIHHTTIRKLKYNTKYYYEVGL---RNTTRRFSFITPPQTG 115
Query: 168 PSDYPNRIAVVGDLGLTYNTTTTVAHLMSNH--PDLLLLIGDLSYADLYLTNGTKSSCYL 225
D P ++GDLG ++++ TT++H + +L +GDLSYAD Y +
Sbjct: 116 L-DVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNH-------- 166
Query: 226 CQSIESPIQETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIER---QAENQTFAAYSSRF 282
RWD WGR+ + V+ P + G HEIE E + F +S R+
Sbjct: 167 -----------DNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRY 215
Query: 283 AFPSEESGSSSSLYYSFNAGGIHFVMLSAYIDYDKSSDQYKWLESDLGDVDREVTPWLIA 342
P E S S+S +YS H ++LS+Y Y + + QY WL+ +L V R TPWLI
Sbjct: 216 HVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIV 275
Query: 343 AWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLD---- 398
H P Y++Y+ H+ E E MR + E Y VD+VF GHVHAYERS RV N +
Sbjct: 276 LMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNG 335
Query: 399 -------PCGPVYILVGDGGNVEGLDIVHADEPGNCPEPSTTPDMGGSCAFNFTSGPASG 451
PVYI +GD GN +D
Sbjct: 336 LCTPVKDQSAPVYITIGDAGNYGVID---------------------------------- 361
Query: 452 KFCWDRQPDYSAYRESSFGHGILEV 476
QP+YSA+RE+SFGHG+ ++
Sbjct: 362 SNMIQPQPEYSAFREASFGHGMFDI 386
|
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 Length = 426 | Back alignment and structure |
|---|
Score = 311 bits (797), Expect = e-102
Identities = 144/445 (32%), Positives = 198/445 (44%), Gaps = 92/445 (20%)
Query: 49 QPEQIFVSLSAR-YDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGY 107
P+Q+ ++ V ISW T + G + V++ S +A G
Sbjct: 24 APQQVHITQGDYEGRGVIISWTTPYDKAG-----------ANKVFYWSENSKSQKRAMGT 72
Query: 108 SLVYNQLYPPDGLQNYTSGIIHHVLITGLQPNTLYEYECGDPSISAMSSSHYFRTMPVSG 167
+ Y NYTS IHH I L+ +T Y Y G +F T P G
Sbjct: 73 VVTYKYY-------NYTSAFIHHCTIKDLEYDTKYYYRLGF---GDAKRQFWFVTPPKPG 122
Query: 168 PSDYPNRIAVVGDLGLTYNTTTTVAHLMSNH--PDLLLLIGDLSYADLYLTNGTKSSCYL 225
P D P ++GD+G T+++ TT+ H N +L +GDLSY++ + +
Sbjct: 123 P-DVPYVFGLIGDIGQTHDSNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNH-------- 173
Query: 226 CQSIESPIQETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIER---QAENQTFAAYSSRF 282
RWD WGR+ + V+ P + G HEI+ E Q F +++R+
Sbjct: 174 -----------DNNRWDTWGRFSERSVAYQPWIWTAGNHEIDYAPDIGEYQPFVPFTNRY 222
Query: 283 AFPSEESGSSSSLYYSFNAGGIHFVMLSAYIDYDKSSDQYKWLESDLGDVDREVTPWLIA 342
P E SGS L+Y+ H ++LS+Y + K S QYKW S+L V+R TPWLI
Sbjct: 223 PTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIV 282
Query: 343 AWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLD---- 398
H P Y++Y AHY E E MR E YY VDIVF+GHVH+YERS RV N + +
Sbjct: 283 LVHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNA 342
Query: 399 -------PCGPVYILVGDGGNVEGLDIVHADEPGNCPEPSTTPDMGGSCAFNFTSGPASG 451
PVYI +GDGGN EGL
Sbjct: 343 KCTPVSDESAPVYITIGDGGNSEGLA---------------------------------- 368
Query: 452 KFCWDRQPDYSAYRESSFGHGILEV 476
QP YSA+RE+SFGHGI ++
Sbjct: 369 SEMTQPQPSYSAFREASFGHGIFDI 393
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* Length = 313 | Back alignment and structure |
|---|
Score = 144 bits (363), Expect = 2e-39
Identities = 56/316 (17%), Positives = 94/316 (29%), Gaps = 62/316 (19%)
Query: 169 SDYPNRIAVVGDLGLTYNTTTTVAHLMSN-----------HPDLLLLIGDLSYADLYLTN 217
R VGD G N A M+N D +L +GD Y
Sbjct: 3 PTPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFT----- 57
Query: 218 GTKSSCYLCQSIESPIQETYQPRWD--YWGRYMQPLVSNVPTMVIEGEHEIERQAENQT- 274
+ + R+ + + P + NVP V+ G H+ Q
Sbjct: 58 --------------GVHDAKDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIA 103
Query: 275 FAAYSSRFAFPSE------ESGSSSSLYYSFNAGGIHFVMLSAYI---------DYDKSS 319
++ S R+ FPS + S+ F + S + +
Sbjct: 104 YSKISKRWNFPSPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALAR 163
Query: 320 DQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVF 379
Q W++ L +++ A H P +S A + C+ ++ LL + V
Sbjct: 164 TQLAWIKKQLAAAK---EDYVLVAGHYPVWS--IAEHGPTHCLVKQLLPLLTTHKVTAYL 218
Query: 380 NGHVHAYERSNRVYNYSLDPCGPVYILVGDGGNVEGLDIVHADEPGNCPEPSTTPD--MG 437
GH H + D G ++L G G ++ P + +G
Sbjct: 219 CGHDHNLQYLQ-------DENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLG 271
Query: 438 GSCAFNFTSGPASGKF 453
G T S +
Sbjct: 272 GFAYVEITPKEMSVTY 287
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} Length = 342 | Back alignment and structure |
|---|
Score = 115 bits (288), Expect = 8e-29
Identities = 38/293 (12%), Positives = 72/293 (24%), Gaps = 74/293 (25%)
Query: 174 RIAVVGDLGLTYNTTTTVAHLMSNH-----PDLLLLIGDLSYADLYLTNGTKSSCYLCQS 228
R A +GD G A ++ G +
Sbjct: 5 RFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFIDGV--------------- 49
Query: 229 IESPIQETYQPRWDYWGRYM---QPLVSNVPTMVIEGEHEIERQAENQ------------ 273
+ P W + + +P + G + Q
Sbjct: 50 -----KGLNDPAWKNLYEDVYSEEKGDMYMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKN 104
Query: 274 --------TFAAYSSRFAFPS---------EESGSSSSLYYSFNAGGIHFVML------S 310
A ++ P+ S S + F+ + S
Sbjct: 105 GETSIEKDADATNYPKWIMPNYWYHYFTHFTVSSGPSIVKTGHKDLAAAFIFIDTWVLSS 164
Query: 311 AYIDYDKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLL 370
+ + L+S L + ++I P YS S + R + + LL
Sbjct: 165 NFPYKKIHEKAWNDLKSQLSVAKKI-ADFIIVVGDQPIYS--SGYSRGSSYLAYYLLPLL 221
Query: 371 YYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDGGNVEGLDIVHADE 423
VD+ +GH + E ++ +I G G +G + +
Sbjct: 222 KDAEVDLYISGHDNNMEV--------IEDNDMAHITCGSGSMSQGKSGMKNSK 266
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} Length = 443 | Back alignment and structure |
|---|
Score = 62.5 bits (151), Expect = 1e-10
Identities = 37/271 (13%), Positives = 82/271 (30%), Gaps = 38/271 (14%)
Query: 158 HYFRTMPVSGPSDYPNRIAVVGDLGLTYNTTTT---VAHLMSNHPDLLLLIGDLSYADLY 214
HYF + +A L Y+ T +A + S D+L++ GDL+
Sbjct: 49 HYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTN---- 104
Query: 215 LTNGTKSSCYLCQSIESPIQETYQPRW------DYWGRYMQPLVSNVPTMVIEGEHEIER 268
NG K+S + +++ + D + + + I
Sbjct: 105 --NGEKTSHEELAKKLTQVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPT----DTISP 158
Query: 269 QAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVML-SAYIDYDK---------- 317
++ ++ + A S+E S Y + + + +ML +A +
Sbjct: 159 TDFSKIYSDFGYEDAISSDEFSLS---YLAAPSSKVWLLMLDTAIYKTNMQQGNPTTEGG 215
Query: 318 -SSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVD 376
++ W++ + + H ++ D L +D
Sbjct: 216 LTAGTLDWIKESSALAKKNGAKLIPVLHHNLTDHNDVIQKGYTINYNQQVIDALTEGAMD 275
Query: 377 IVFNGHVHAYERSNRVYNYSLDPCGPVYILV 407
+GH+H + + + +V
Sbjct: 276 FSLSGHIHT----QNIRSAKSTDGKEITDIV 302
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A Length = 330 | Back alignment and structure |
|---|
Score = 58.4 bits (141), Expect = 1e-09
Identities = 31/202 (15%), Positives = 64/202 (31%), Gaps = 43/202 (21%)
Query: 190 TVAHLMSNH--PDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRY 247
+ L + PD ++ GDL+ + Y+ +
Sbjct: 56 LLEQLNQSGLRPDAIVFTGDLA--------------------DKGEPAAYRKLRGLVEPF 95
Query: 248 MQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFV 307
L + + G H+ +R + +E+ S + L G+ +
Sbjct: 96 AAQL--GAELVWVMGNHD-DRAELRKFLL----------DEAPSMAPLDRVCMIDGLRII 142
Query: 308 ML-SAYIDYDK---SSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECM- 362
+L ++ + + Q WL +L + ++A HPP + VE
Sbjct: 143 VLDTSVPGHHHGEIRASQLGWLAEELATPAPD--GTILALHHPPI-PSVLDMAVTVELRD 199
Query: 363 RVEMEDLLYYYGVDIVFNGHVH 384
+ + +L V + GH+H
Sbjct: 200 QAALGRVLRGTDVRAILAGHLH 221
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A Length = 274 | Back alignment and structure |
|---|
Score = 54.8 bits (132), Expect = 1e-08
Identities = 33/203 (16%), Positives = 67/203 (33%), Gaps = 44/203 (21%)
Query: 190 TVAHLMSNH--PDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRY 247
V+ L + PD +++ GD+ E YQ +
Sbjct: 31 VVSQLNALRERPDAVVVSGDIV--------------------NCGRPEEYQ----VARQI 66
Query: 248 MQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFV 307
+ L N P +I G H+ ++ + + ++++ + + +
Sbjct: 67 LGSL--NYPLYLIPGNHD-DKALFLEYLQPL------CPQLGSDANNMRCAVDDFATRLL 117
Query: 308 ML-SAYIDYDK---SSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECM- 362
+ S+ K + + WLE+ L + P I HPP +A + C
Sbjct: 118 FIDSSRAGTSKGWLTDETISWLEAQLFEGGD--KPATIFMHHPPL-PLGNAQMDPIACEN 174
Query: 363 RVEMEDLLYYY-GVDIVFNGHVH 384
+ L+ + + +F GH H
Sbjct: 175 GHRLLALVERFPSLTRIFCGHNH 197
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 Length = 322 | Back alignment and structure |
|---|
Score = 44.2 bits (103), Expect = 6e-05
Identities = 34/252 (13%), Positives = 57/252 (22%), Gaps = 74/252 (29%)
Query: 190 TVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYMQ 249
V ++ +GD+ M
Sbjct: 43 AVLQWRRERVQCVVQLGDIIDGH---------------------NRRRDASDRALDTVMA 81
Query: 250 PLVS-NVPTMVIEGEHEIERQAENQTFAAYSSR-----FAFPSEESGSSSSLYYSFNAGG 303
L + +V + G HE + ++ + S+ G Y A
Sbjct: 82 ELDACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPN 141
Query: 304 IHFVMLSAY----------------------------------------------IDYDK 317
FV+L AY +
Sbjct: 142 FRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGF 201
Query: 318 SSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDI 377
S Q +WL++ L D + LI + H P + + + L + V
Sbjct: 202 SEQQLQWLDAVLTLSDHKQERVLIFS-HLPVHPCAADPICLAWNHEAVLSVLRSHQSVLC 260
Query: 378 VFNGHVHAYERS 389
GH H R
Sbjct: 261 FIAGHDHDGGRC 272
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 487 | |||
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 100.0 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 100.0 | |
| 2yeq_A | 527 | Apased, PHOD, alkaline phosphatase D; hydrolase, p | 100.0 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 100.0 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 99.96 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 99.89 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 99.87 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 99.87 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 99.77 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 99.55 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 99.54 | |
| 2q8u_A | 336 | Exonuclease, putative; structural genomics, joint | 99.36 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 99.25 | |
| 3rl5_A | 296 | Metallophosphoesterase mpped2; alpha-beta fold, me | 99.24 | |
| 3av0_A | 386 | DNA double-strand break repair protein MRE11; DNA | 99.18 | |
| 1z2w_A | 192 | Vacuolar protein sorting 29; VPS29, retromer, phos | 99.14 | |
| 3ck2_A | 176 | Conserved uncharacterized protein (predicted phosp | 99.14 | |
| 2a22_A | 215 | Vacuolar protein sorting 29; alpha-beta-BETA-alpha | 99.09 | |
| 3qfm_A | 270 | SAPH, putative uncharacterized protein; sandwich f | 99.09 | |
| 1s3l_A | 190 | Hypothetical protein MJ0936; phosphodiesterase, nu | 99.07 | |
| 1xm7_A | 195 | Hypothetical protein AQ_1665; structural genomics, | 99.05 | |
| 3tho_B | 379 | Exonuclease, putative; adenosine triphosphate, bac | 99.03 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 99.02 | |
| 2kkn_A | 178 | Uncharacterized protein; protein phosphatase 2A ho | 98.93 | |
| 1ii7_A | 333 | MRE11 nuclease; RAD50, DNA double-strand break rep | 98.92 | |
| 3t1i_A | 431 | Double-strand break repair protein MRE11A; DNA rep | 98.73 | |
| 4fbw_A | 417 | DNA repair protein RAD32; DNA double-strand break | 98.64 | |
| 2z1a_A | 552 | 5'-nucleotidase; metal-binding, nucleotide-binding | 98.63 | |
| 1su1_A | 208 | Hypothetical protein YFCE; structural genomics, ph | 98.54 | |
| 4fbk_A | 472 | DNA repair and telomere maintenance protein NBS1, | 98.5 | |
| 1hp1_A | 516 | 5'-nucleotidase; metallophosphatase, dinuclear, me | 98.44 | |
| 3qfk_A | 527 | Uncharacterized protein; structural genomics, cent | 98.4 | |
| 2wdc_A | 562 | SOXB, sulfur oxidation protein SOXB; sulfur-sulfur | 98.37 | |
| 1t71_A | 281 | Phosphatase, conserved HYPO; crystal, X-RAY crysta | 98.34 | |
| 3ztv_A | 579 | NAD nucleotidase, NADN; hydrolase, NAD pyrophospha | 98.34 | |
| 4h2g_A | 546 | 5'-nucleotidase; dimer, hydrolase, phosphatase, ex | 98.34 | |
| 3ive_A | 509 | Nucleotidase; structural genomics, PSI-2, protein | 98.29 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 98.29 | |
| 3c9f_A | 557 | 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, p | 98.2 | |
| 1t70_A | 255 | Phosphatase; crystal, X-RAY crystallography, struc | 98.17 | |
| 2z06_A | 252 | Putative uncharacterized protein TTHA0625; metal b | 98.15 | |
| 3gve_A | 341 | YFKN protein; alpha-beta-BETA-alpha sandwich, stru | 97.76 | |
| 3jyf_A | 339 | 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- n | 97.65 | |
| 4h1s_A | 530 | 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo | 97.57 | |
| 1x5l_A | 111 | Ephrin type-A receptor 8; FN3 domain, structural g | 96.74 | |
| 2ede_A | 114 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.67 | |
| 1x5f_A | 120 | Neogenin; RGM binding, fibronectin type III domain | 96.59 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 96.51 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 96.48 | |
| 1x4x_A | 106 | Fibronectin type-III domain containing protein 3A; | 96.42 | |
| 2edd_A | 123 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.38 | |
| 3e0j_A | 476 | DNA polymerase subunit delta-2; DNA polymerase del | 96.36 | |
| 2dm4_A | 108 | Sortilin-related receptor; beta-sandwich, sorting | 96.34 | |
| 2crz_A | 110 | Fibronectin type-III domain containing protein 3A; | 96.33 | |
| 2ed8_A | 106 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.31 | |
| 1x4y_A | 114 | Biregional cell adhesion molecule-related/DOWN- re | 96.3 | |
| 2djs_A | 108 | Ephrin type-B receptor 1; tyrosine-protein kinase | 96.27 | |
| 2ed7_A | 119 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.18 | |
| 1x5g_A | 116 | Neogenin; RGM binding, fibronectin type III domain | 96.09 | |
| 1x5j_A | 113 | Neogenin; RGM binding, fibronectin type III domain | 96.03 | |
| 1x5z_A | 115 | Receptor-type tyrosine-protein phosphatase delta; | 96.01 | |
| 1x5a_A | 107 | Ephrin type-A receptor 1; tyrosine-protein kinase | 95.92 | |
| 2edy_A | 103 | Receptor-type tyrosine-protein phosphatase F; LAR | 95.91 | |
| 2kbg_A | 114 | N-CAM 2, neural cell adhesion molecule 2; fibronec | 95.91 | |
| 3teu_A | 98 | Fibcon; FN3 domain, fibronectin TPYE III domain, c | 95.87 | |
| 2haz_A | 105 | N-CAM 1, neural cell adhesion molecule 1; fibronec | 95.87 | |
| 2dju_A | 106 | Receptor-type tyrosine-protein phosphatase F; LAR | 95.85 | |
| 2dn7_A | 107 | Receptor-type tyrosine-protein phosphatase F; LAR | 95.84 | |
| 2e7h_A | 109 | Ephrin type-B receptor 4; FN3 domain, tyrosine- pr | 95.84 | |
| 1x5x_A | 109 | Fibronectin type-III domain containing protein 3A; | 95.83 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 95.77 | |
| 1wfo_A | 130 | Sidekick 2; FN3, cell adhesion, structural genomic | 95.77 | |
| 3b83_A | 100 | Ten-D3; beta sheet, computational redesigned prote | 95.76 | |
| 2ed9_A | 124 | Netrin receptor DCC; tumor suppressor protein DCC, | 95.76 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 95.67 | |
| 2ee2_A | 119 | Contactin-1; neural cell surface protein F3, glyco | 95.65 | |
| 1uc6_A | 109 | CNTF receptor, ciliary neurotrophic factor recepto | 95.63 | |
| 2rb8_A | 104 | Tenascin; beta sheet,loop design, alternative spli | 95.53 | |
| 2edx_A | 134 | Protein tyrosine phosphatase, receptor type, F; LA | 95.41 | |
| 1x3d_A | 118 | Fibronectin type-III domain containing protein 3A; | 95.38 | |
| 2dle_A | 104 | Receptor-type tyrosine-protein phosphatase ETA; pr | 95.32 | |
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 95.31 | |
| 2crm_A | 120 | Fibronectin type-III domain containing protein 3A; | 95.27 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 95.25 | |
| 2ee3_A | 108 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 95.14 | |
| 2dbj_A | 124 | Proto-oncogene tyrosine-protein kinase MER precurs | 95.12 | |
| 2yrz_A | 118 | Integrin beta-4; GP150, CD104 antigen, structural | 95.1 | |
| 1x4z_A | 121 | Biregional cell adhesion molecule-related/DOWN- re | 95.09 | |
| 2dmk_A | 127 | Midline 2 isoform 2; midline defect 2, tripartite | 95.06 | |
| 2dkm_A | 104 | Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, | 94.94 | |
| 1wis_A | 124 | KIAA1514 protein; FNIII domain, sidekick-2, struct | 94.89 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 94.85 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 94.84 | |
| 2db8_A | 110 | Tripartite motif protein 9, isoform 2; ring finger | 94.83 | |
| 1k85_A | 88 | Chitinase A1; fibronectin type III domain, chitin | 94.75 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 94.72 | |
| 3tes_A | 98 | Tencon; fibronectin type III domain, FN3, consensu | 94.7 | |
| 1va9_A | 122 | DOWN syndrome cell adhesion molecule like- protein | 94.63 | |
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 94.62 | |
| 3n1f_C | 102 | Cell adhesion molecule-related/DOWN-regulated BY; | 94.61 | |
| 2yux_A | 120 | Myosin-binding protein C, SLOW-type; fibronectin I | 94.58 | |
| 2cui_A | 112 | Tenascin-X; fibronectin type III domain, extracell | 94.53 | |
| 2cuh_A | 115 | Tenascin-X; fibronectin type III domain, extracell | 94.52 | |
| 2dlh_A | 121 | Receptor-type tyrosine-protein phosphatase delta; | 94.52 | |
| 2yuw_A | 110 | Myosin binding protein C, SLOW type; fibronectin I | 94.5 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 94.47 | |
| 1x5h_A | 132 | Neogenin; RGM binding, fibronectin type III domain | 94.46 | |
| 2cum_A | 105 | Tenascin-X; hexabrachion-like, fibronectin type II | 94.45 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 94.44 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 94.42 | |
| 1uem_A | 117 | KIAA1568 protein; immunoglobulin-like beta-sandwic | 94.38 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 94.3 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 94.22 | |
| 3qwq_B | 114 | Adnectin; cell surface receptor, tyrosine kinase, | 94.02 | |
| 1x5y_A | 111 | Myosin binding protein C, fast-type; fast MYBP-C, | 94.01 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 93.93 | |
| 1j8k_A | 94 | Fibronectin; EDA, TYPEIII domain, protein binding; | 93.87 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 93.8 | |
| 1uen_A | 125 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 93.73 | |
| 3mpc_A | 103 | FN3-like protein; fibronectin, FN(III), unknown fu | 93.57 | |
| 2b5i_B | 214 | Interleukin-2 receptor beta chain; four-helix bund | 93.54 | |
| 2e3v_A | 122 | Neural cell adhesion molecule 1, 140 kDa isoform; | 93.54 | |
| 3up1_A | 223 | Interleukin-7 receptor subunit alpha; cytokine rec | 93.48 | |
| 3k2m_C | 101 | Monobody HA4; engineered binding protein, antibody | 93.42 | |
| 1ujt_A | 120 | KIAA1568 protein; fibronectin type III domain, str | 93.39 | |
| 3n06_B | 210 | PRL-R, prolactin receptor; PH dependence, hematopo | 93.37 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 93.36 | |
| 1cd9_B | 215 | G-CSF-R, protein (G-CSF receptor); class1 cytokine | 93.25 | |
| 1wk0_A | 137 | KIAA0970 protein; fibronectin type III domain, str | 93.24 | |
| 2ocf_D | 121 | Fibronectin; estrogen receptor, LBD, monobody, est | 93.23 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 92.9 | |
| 1bpv_A | 112 | Titin, A71, connectin; fibronectin type III; NMR { | 92.84 | |
| 1eer_B | 227 | Epobp, erythropoietin receptor; signal transductio | 92.83 | |
| 1bqu_A | 215 | Protein (GP130); cytokine receptor, glycoprotein 1 | 92.77 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 92.77 | |
| 2ic2_A | 115 | CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t | 92.73 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 92.65 | |
| 1uey_A | 127 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 92.64 | |
| 1i1r_A | 303 | GP130, interleukin-6 receptor beta chain; cytokine | 92.55 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 92.54 | |
| 2d9q_B | 313 | Granulocyte colony-stimulating factor receptor; cy | 92.47 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 92.37 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 92.29 | |
| 1wfn_A | 119 | Sidekick 2; FN3, cell adhesion, structural genomic | 92.28 | |
| 1x5i_A | 126 | Neogenin; RGM binding, fibronectin type III domain | 92.22 | |
| 2qbw_A | 195 | PDZ-fibronectin fusion protein; fibronectin PDZ, u | 92.2 | |
| 2edb_A | 116 | Netrin receptor DCC; tumor suppressor protein DCC, | 92.08 | |
| 3qht_C | 97 | Monobody YSMB-1; fibronectin type III, yeast small | 92.07 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 92.06 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 92.03 | |
| 3fl7_A | 536 | Ephrin receptor; ATP-binding, kinase, nucleotide-b | 91.68 | |
| 1wfu_A | 120 | Unnamed protein product; FN3 domain, similar to 17 | 91.61 | |
| 1oww_A | 98 | FN, fibronectin first type III module, CIG; fibron | 91.52 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 91.41 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 91.03 | |
| 1v5j_A | 108 | KIAA1355 protein, RSGI RUH-008; FN3 domain, human | 91.01 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 90.9 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 90.87 | |
| 3t04_D | 103 | Monobody 7C12; engineered binding protein, antibod | 90.79 | |
| 1wf5_A | 121 | Sidekick 2 protein; FNIII domain, structural genom | 89.76 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 89.17 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 88.74 | |
| 2jll_A | 389 | NCAM2, neural cell adhesion molecule 2; immunoglob | 88.6 | |
| 2ha1_A | 201 | Fibronectin; beta sandwich, protein-protein comple | 88.09 | |
| 2ekj_A | 105 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 87.9 | |
| 2w1n_A | 238 | O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrol | 87.89 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 87.83 | |
| 3v6o_A | 206 | Leptin receptor; receptor-antibody complex, cytoki | 87.07 | |
| 1n26_A | 325 | IL-6 receptor alpha chain; transmembrane, glycopro | 86.26 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 86.0 | |
| 2h41_A | 95 | Fibronectin; beta sandwich, cell adhesion, structu | 85.92 | |
| 2q7n_A | 488 | Leukemia inhibitory factor receptor; cytokine cell | 85.69 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 85.6 | |
| 3csg_A | 461 | MBP, maltose-binding protein monobody YS1 fusion, | 85.17 | |
| 2b5i_C | 199 | Cytokine receptor common gamma chain; four-helix b | 84.98 | |
| 1wj3_A | 117 | KIAA1496 protein; beta sandwich, PANG, structural | 84.88 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 84.87 | |
| 3e0g_A | 483 | Leukemia inhibitory factor receptor; IG domain, cy | 83.4 | |
| 2erj_C | 247 | Cytokine receptor common gamma chain; immune syste | 82.56 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 82.54 | |
| 1axi_B | 236 | HGHBP, growth hormone receptor; complex (hormone-r | 82.22 | |
| 3tgx_A | 219 | Interleukin-21 receptor; class I cytokine, class I | 81.02 | |
| 3bpo_C | 314 | Interleukin-13 receptor alpha-1 chain; IL4, IL13, | 80.41 |
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-67 Score=547.60 Aligned_cols=381 Identities=38% Similarity=0.660 Sum_probs=315.6
Q ss_pred CCCCCCCCcc--cccCCCCCCCCCceEEEeeccCC-CcEEEEEEcC-CCCCCCCCCCCCCCCCccEEEEeccCCCCceEE
Q 039280 29 RLNVSDLPYV--LQNNAQGEGFQPEQIFVSLSARY-DSVWISWITG-EFQIGDNISPLDPELVQSIVYFRVFRSSLTYQA 104 (487)
Q Consensus 29 ~~~~~~~~~~--~~~~~~~~~~~P~qi~l~~~~~~-~~~~V~W~T~-~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~ 104 (487)
|..+.|||++ +.+... ....|+||||++++++ ++|+|+|.|. +. ...++|+||++++.+..++
T Consensus 3 ~~~~~~~~~~~~~~~~~~-~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~------------~~~~~V~y~~~~~~~~~~~ 69 (426)
T 1xzw_A 3 NAEDVDMPWDSDVFAVPS-GYNAPQQVHITQGDYEGRGVIISWTTPYDK------------AGANKVFYWSENSKSQKRA 69 (426)
T ss_dssp CHHHHBCCTTCGGGCCCC-STTCCEEEEEEECSSSSSCEEEEEEESSCC------------TTTTEEEEEETTCCCCEEE
T ss_pred CcccccCCCCCCcccCCC-CCCCCceEEEEECCCCCCeEEEEEEeCCCC------------CCCCEEEEecCCCCCceEE
Confidence 3446789987 444433 3688999999999987 8999999998 53 1368999999988888888
Q ss_pred EEEEEEeeeecCCCCCCccccCcEEEEEeCCCCCCCEEEEEEecCCCCCcCceEEEEcCCCCCCCCCCcEEEEEecCCCC
Q 039280 105 EGYSLVYNQLYPPDGLQNYTSGIIHHVLITGLQPNTLYEYECGDPSISAMSSSHYFRTMPVSGPSDYPNRIAVVGDLGLT 184 (487)
Q Consensus 105 ~g~~~~~~~~~~~~g~~~~~~~~~h~v~l~gL~P~T~Y~Y~vg~~~~~~~s~~~~F~T~p~~~~~~~~~~f~v~gD~~~~ 184 (487)
.|+..+|... ++.++++|+|+|+||+|+|+|+|||+.+ .||+.++|+|+|.++.. .++||+++||+|..
T Consensus 70 ~~~~~~~~~~-------~~~~~~~~~v~l~gL~p~t~Y~Yrv~~g---~~s~~~~f~T~p~~~~~-~~~~f~~~gD~~~~ 138 (426)
T 1xzw_A 70 MGTVVTYKYY-------NYTSAFIHHCTIKDLEYDTKYYYRLGFG---DAKRQFWFVTPPKPGPD-VPYVFGLIGDIGQT 138 (426)
T ss_dssp ECEEECCEET-------TEECCEEEEEEECCCCTTCEEEEEECCG---GGCEEEEEECCCCCCTT-CCEEEEEECSCTTB
T ss_pred EEEEEEEEec-------CCcCCEEEEEEECCCCCCCEEEEEECCC---CccceeEEECCCCCCCC-CCeEEEEEEeCCCC
Confidence 8887766531 2346799999999999999999999873 58999999999976543 48999999999986
Q ss_pred CChHHHHHHHHHc--CCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhhhccccCCCEEEecC
Q 039280 185 YNTTTTVAHLMSN--HPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYMQPLVSNVPTMVIEG 262 (487)
Q Consensus 185 ~~~~~~l~~l~~~--~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~~~l~~~~P~~~v~G 262 (487)
.....+++++.+. +|||||++||++|+++... ..+.+|+.|.+.++++.+.+|+|+++|
T Consensus 139 ~~~~~~l~~i~~~~~~~D~vl~~GD~~y~~~~~~-------------------~~~~~~~~~~~~l~~l~~~~P~~~v~G 199 (426)
T 1xzw_A 139 HDSNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPN-------------------HDNNRWDTWGRFSERSVAYQPWIWTAG 199 (426)
T ss_dssp HHHHHHHHHHHHCTTCCSEEEECSCCCCGGGSGG-------------------GCTHHHHHHHHHHHHHHTTSCEECCCC
T ss_pred CchHHHHHHHHhCCCCCCEEEeCCChhhcccCCc-------------------ccchHHHHHHHHHHHHHhcCCEEEecc
Confidence 5456678888876 8999999999999754311 013578889999999888999999999
Q ss_pred CcccccCc---cchhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCcccCCCChHHHHHHHHHhcccCCCCCCe
Q 039280 263 EHEIERQA---ENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYIDYDKSSDQYKWLESDLGDVDREVTPW 339 (487)
Q Consensus 263 NHD~~~~~---~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~r~~~~w 339 (487)
|||+.... ....|..|..+|.||.++++...+.||+|++|+++||+||++..+..+.+|++||+++|+++++++++|
T Consensus 200 NHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w 279 (426)
T 1xzw_A 200 NHEIDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPW 279 (426)
T ss_dssp GGGCCCBGGGTBCSTTHHHHHHSCCCCGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCE
T ss_pred ccccccCCccccccCChhheEEEeCCcccCCCCCCCeEEEEECCEEEEEeeCcccCCCCHHHHHHHHHHHHhhhhcCCCE
Confidence 99997542 123577888999999876555678899999999999999998877778999999999999987778899
Q ss_pred EEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceecccccCCc-----------cCCCCcEEEEeC
Q 039280 340 LIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYS-----------LDPCGPVYILVG 408 (487)
Q Consensus 340 ~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~p~~~~~-----------~~~~g~vyIv~G 408 (487)
+||++|+|+|+....+..+...+|+.|+++|++++||++|+||+|.|+|++|+++++ .+++|++||++|
T Consensus 280 ~Iv~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~~~r~~p~~~~~~~~~~g~~~~~~~~~g~~yi~~G 359 (426)
T 1xzw_A 280 LIVLVHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPVSDESAPVYITIG 359 (426)
T ss_dssp EEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSTTCCCCCEECTTSCEEEEEC
T ss_pred EEEEeccCceeCCCcccCCCHHHHHHHHHHHHHhCCCEEEEcChhhheeeeeecCccccccCCccccccCCCccEEEEeC
Confidence 999999999987654444556789999999999999999999999999999998765 347899999999
Q ss_pred CccccCCcccccCCCCCCCCCCCCCCCCCCccccccccCCCCCCcccCCCCCccceecCCcceEEEEEEccceeEEee
Q 039280 409 DGGNVEGLDIVHADEPGNCPEPSTTPDMGGSCAFNFTSGPASGKFCWDRQPDYSAYRESSFGHGILEVLISLSIALTT 486 (487)
Q Consensus 409 ~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~r~~~~G~~~l~~~n~t~~~~~~ 486 (487)
+||+.+++... | ..++|+||+||+.+|||++|+|.|+|||+||.
T Consensus 360 ~gG~~~~~~~~------------------------~----------~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~ 403 (426)
T 1xzw_A 360 DGGNSEGLASE------------------------M----------TQPQPSYSAFREASFGHGIFDIKNRTHAHFSW 403 (426)
T ss_dssp CSCCTTCCCCC------------------------B----------CSSCCTTEEEEECCCEEEEEEECSSSEEEEEE
T ss_pred CCccccccccc------------------------c----------CCCCCCceeEEecCCCeEEEEEEcCCeEEEEE
Confidence 99998765311 1 13578999999999999999999999999985
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-66 Score=536.85 Aligned_cols=376 Identities=37% Similarity=0.655 Sum_probs=308.9
Q ss_pred CCCCcc--cccCCCCCCCCCceEEEeeccCC-CcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEE
Q 039280 33 SDLPYV--LQNNAQGEGFQPEQIFVSLSARY-DSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSL 109 (487)
Q Consensus 33 ~~~~~~--~~~~~~~~~~~P~qi~l~~~~~~-~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~ 109 (487)
.|||++ +.+..++ ...|+||||++++++ ++|+|+|.|.+. ...+.|+||++++.+..++.|+..
T Consensus 1 ~~~~~~~~~~~~~~~-~~~P~~v~l~~~~~~~~~~~v~W~t~~~------------~~~~~V~~~~~~~~~~~~~~g~~~ 67 (424)
T 2qfp_A 1 RDMPLDSDVFRVPPG-YNAPQQVHITQGDLVGRAMIISWVTMDE------------PGSSAVRYWSEKNGRKRIAKGKMS 67 (424)
T ss_dssp CBCCTTSGGGCCCCS-TTCCEEEEEEECSSSSSCEEEEEEESSS------------CCCCCEEEEESSSCCCEEECCEEE
T ss_pred CCCCCCCCcccCCCC-CCCCceEEEEecCCCCCeEEEEEECCCC------------CCCCEEEEEeCCCCCceEEEEEEE
Confidence 367886 6666543 568999999999876 899999999763 136899999998888888888877
Q ss_pred EeeeecCCCCCCccccCcEEEEEeCCCCCCCEEEEEEecCCCCCcCceEEEEcCCCCCCCCCCcEEEEEecCCCCCChHH
Q 039280 110 VYNQLYPPDGLQNYTSGIIHHVLITGLQPNTLYEYECGDPSISAMSSSHYFRTMPVSGPSDYPNRIAVVGDLGLTYNTTT 189 (487)
Q Consensus 110 ~~~~~~~~~g~~~~~~~~~h~v~l~gL~P~T~Y~Y~vg~~~~~~~s~~~~F~T~p~~~~~~~~~~f~v~gD~~~~~~~~~ 189 (487)
+|... ++.++++|+|+|+||+|+|+|+|||+.+ .+|+.++|+|+|.++.. .++||+++||+|.......
T Consensus 68 ~~~~~-------~~~~~~~~~v~l~gL~p~t~Y~Yrv~~~---~~s~~~~f~T~p~~~~~-~~~~f~~igD~~~~~~~~~ 136 (424)
T 2qfp_A 68 TYRFF-------NYSSGFIHHTTIRKLKYNTKYYYEVGLR---NTTRRFSFITPPQTGLD-VPYTFGLIGDLGQSFDSNT 136 (424)
T ss_dssp CCBCS-------SCBCCEEEEEEECSCCTTCEEEEEECCS---SSCEEEEEECCCCCCTT-CCEEEEEECSCTTBHHHHH
T ss_pred EEEec-------CCCCCEEEEEEECCCCCCCEEEEEECCC---CccceEEEECCCCCCCC-CCeEEEEEEeCCCCCChHH
Confidence 66531 2357799999999999999999999975 58999999999976543 4899999999998755556
Q ss_pred HHHHHHHc--CCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhhhccccCCCEEEecCCcccc
Q 039280 190 TVAHLMSN--HPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIE 267 (487)
Q Consensus 190 ~l~~l~~~--~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~~~l~~~~P~~~v~GNHD~~ 267 (487)
+++++.+. +|||||++||++|++++... ...+|+.|.+.++++.+.+|+|+++||||+.
T Consensus 137 ~l~~~~~~~~~~D~vl~~GDl~y~~~~~~~-------------------~~~~~~~~~~~l~~~~~~~P~~~v~GNHD~~ 197 (424)
T 2qfp_A 137 TLSHYELSPKKGQTVLFVGDLSYADRYPNH-------------------DNVRWDTWGRFTERSVAYQPWIWTAGNHEIE 197 (424)
T ss_dssp HHHHHHTCSSCCCEEEECSCCSCGGGSGGG-------------------CTHHHHHHHHHHHHHHTTSCEEECCCHHHHC
T ss_pred HHHHHHhCCCCCCEEEEcCccccccccccc-------------------cchHHHHHHHHHHHHHhcCCeEeecCCcccc
Confidence 77888775 89999999999997543110 1257888888888888889999999999997
Q ss_pred cCc---cchhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCcccCCCChHHHHHHHHHhcccCCCCCCeEEEEc
Q 039280 268 RQA---ENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYIDYDKSSDQYKWLESDLGDVDREVTPWLIAAW 344 (487)
Q Consensus 268 ~~~---~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~ 344 (487)
... ....|..|..+|.||..+.....+.||+|++|+++||+||++..+....+|++||+++|+++++++++|+||++
T Consensus 198 ~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~ 277 (424)
T 2qfp_A 198 FAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLM 277 (424)
T ss_dssp CBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEEC
T ss_pred cCCcccccccchhhhhhccCCccccCCCCCcEEEEEECCEEEEEecCCccCCCcHHHHHHHHHHHhhhcccCCCEEEEEe
Confidence 432 11257788899999976554567889999999999999999877766789999999999998777789999999
Q ss_pred CCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceecccccCCc-----------cCCCCcEEEEeCCcccc
Q 039280 345 HPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYS-----------LDPCGPVYILVGDGGNV 413 (487)
Q Consensus 345 H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~p~~~~~-----------~~~~g~vyIv~G~gG~~ 413 (487)
|+|+++....++.+...+++.|+++|++++||++|+||+|.|+|++|+++.. .+++|++||++|+||+.
T Consensus 278 H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~vyi~~G~gg~~ 357 (424)
T 2qfp_A 278 HSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNY 357 (424)
T ss_dssp SSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCEECTTSCEEEEECCSCTT
T ss_pred CcCceecCcccccccHHHHHHHHHHHHHhCCcEEEECChhhhheeccccCcceeccCCccccccCCCCcEEEEecCCCCc
Confidence 9999987554444556789999999999999999999999999999987532 24689999999999998
Q ss_pred CCcccccCCCCCCCCCCCCCCCCCCccccccccCCCCCCcccCCCCCccceecCCcceEEEEEEccceeEEe
Q 039280 414 EGLDIVHADEPGNCPEPSTTPDMGGSCAFNFTSGPASGKFCWDRQPDYSAYRESSFGHGILEVLISLSIALT 485 (487)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~r~~~~G~~~l~~~n~t~~~~~ 485 (487)
+++... | ..++|+||+||+..|||++|+|.|+|||+|+
T Consensus 358 ~~~~~~------------------------~----------~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~ 395 (424)
T 2qfp_A 358 GVIDSN------------------------M----------IQPQPEYSAFREASFGHGMFDIKNRTHAHFS 395 (424)
T ss_dssp SCCCCC------------------------B----------CSSCCTTEEEEECCCEEEEEEECSSSEEEEE
T ss_pred cccCcc------------------------C----------CCCCCCcceEEecCCCEEEEEEEcCcEEEEE
Confidence 765311 1 1357899999999999999999999999997
|
| >2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-37 Score=325.36 Aligned_cols=313 Identities=20% Similarity=0.236 Sum_probs=211.8
Q ss_pred cCCC-cEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCc--eEEEEEEEEeeeecCCCCCCccccCcEEEEEeCC
Q 039280 59 ARYD-SVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLT--YQAEGYSLVYNQLYPPDGLQNYTSGIIHHVLITG 135 (487)
Q Consensus 59 ~~~~-~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~--~~~~g~~~~~~~~~~~~g~~~~~~~~~h~v~l~g 135 (487)
+||+ ..+|-|....+..-. -..+. .....|+|-.+.+... ....|...+. ....++|+|.|+|
T Consensus 16 GDp~~~~vilWtr~~p~~~~-~~~~~--~~~~~v~~eva~d~~f~~~v~~g~~~a~-----------~~~~~t~~v~v~g 81 (527)
T 2yeq_A 16 GDPLSDSVVLWTRLAPDPLN-GGGMP--KQAVPVKWEVAKDEHFRKIVRKGTEMAK-----------PSLAHSVHVEADG 81 (527)
T ss_dssp ECCCSSCEEEEEECCSBGGG-TBCCC--SSCEEEEEEEESSTTSSSEEEEEEEEEC-----------GGGTTEEEEEECS
T ss_pred cCCCCCeEEEEEecCCcccC-CCCCC--CCceEEEEEEecCCccccceEeeeEEec-----------CCCceEEEeecCC
Confidence 5662 344779887542000 00000 1234666666654432 3344544322 1256899999999
Q ss_pred CCCCCEEEEEEecCCCCCcCceEEEEcCCCCCCCCCCcEEEEEecCCCCCChHHHHHHHHHcCCCEEEEcCccccccccc
Q 039280 136 LQPNTLYEYECGDPSISAMSSSHYFRTMPVSGPSDYPNRIAVVGDLGLTYNTTTTVAHLMSNHPDLLLLIGDLSYADLYL 215 (487)
Q Consensus 136 L~P~T~Y~Y~vg~~~~~~~s~~~~F~T~p~~~~~~~~~~f~v~gD~~~~~~~~~~l~~l~~~~pdfvl~~GDl~y~d~~~ 215 (487)
|+|+|+|+|||+.++ .+|++++|+|+|.++....++||+++||.+.......++.+|.+.+||||||+||++|+++..
T Consensus 82 L~P~t~Y~Yr~~~~~--~~S~~g~frT~P~~~~~~~~~rfa~~sc~~~~~g~~~~~~~ia~~~~D~vlhlGD~iY~d~~~ 159 (527)
T 2yeq_A 82 LEPNKVYYYRFKTGH--ELSPVGKTKTLPAPGANVPQMTFAFASCQQYEHGYYTAYKHMAKEKLDLVFHLGDYIYEYGPN 159 (527)
T ss_dssp CCTTCEEEEEEEETT--EECCCEEEECCCCTTCCCCCEEEEEECCCCGGGCCCHHHHHHTTSCCSEEEECSCSSCCCCTT
T ss_pred cCCCCEEEEEEEeCC--CcCCCceEEcCCCCCCCCCCeEEEEEecCCCCCCccHHHHHHHhcCCCEEEecCCcccCCCCC
Confidence 999999999999865 689999999999876443589999999998643444677888888999999999999987542
Q ss_pred cCCCccccccccC-CCCcccchhhHHHHHHH--HhhhccccCCCEEEecCCcccccCccch---------hh-----HHh
Q 039280 216 TNGTKSSCYLCQS-IESPIQETYQPRWDYWG--RYMQPLVSNVPTMVIEGEHEIERQAENQ---------TF-----AAY 278 (487)
Q Consensus 216 ~~g~~~~~~~~~~-~~~~~~~~y~~~w~~~~--~~~~~l~~~~P~~~v~GNHD~~~~~~~~---------~~-----~~y 278 (487)
..+.....-+... ......+.|+.+|..+. ..++.+.+.+|+|+++||||+.++.... .| .++
T Consensus 160 ~~~~~~~~~R~~~~~e~~tl~~yr~~y~~~~~dp~lq~~~a~~P~i~~wDDHE~~nn~~~~~~~~~~~~~~f~~rr~~A~ 239 (527)
T 2yeq_A 160 EYVSKTGNVRTHNSAEIITLQDYRNRHAQYRSDANLKAAHAAFPWVVTWDDHEVENNYANKIPEKGQSVEAFVLRRAAAY 239 (527)
T ss_dssp SSCCTTCCCSCCSSSSCCSHHHHHHHHHHHHTCHHHHHHHHHSEEEECCCSTTTSTTCBTTBCSTTCCHHHHHHHHHHHH
T ss_pred cccccccccccCCcccccCHHHHHHHHHHHhCCHHHHHHHhcCCEEEecccccccCCCCCCcccccCCcccHHHHHHHHH
Confidence 2110000000000 00112345666666654 2467778899999999999998664321 01 122
Q ss_pred hccc-CCCCCC----CCCCCcceEEEEeCC-EEEEEEcCcccCC----------------------CChHHHHHHHHHhc
Q 039280 279 SSRF-AFPSEE----SGSSSSLYYSFNAGG-IHFVMLSAYIDYD----------------------KSSDQYKWLESDLG 330 (487)
Q Consensus 279 ~~~f-~~P~~~----~~~~~~~yYsf~~g~-v~fi~Ldt~~~~~----------------------~~~~Q~~WL~~~L~ 330 (487)
..+| .||... .+.....||+|++|+ ++||+||++...+ .+.+|++||+++|+
T Consensus 240 ~ay~e~~P~~~~~~p~~~~~~~y~sf~~G~lv~~i~LDtR~yr~~~~~~~~~~~~~~~~~~~~~~~lG~~Q~~WL~~~L~ 319 (527)
T 2yeq_A 240 QAYYEHMPLRISSLPNGPDMQLYRHFTYGNLASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWLFNNLG 319 (527)
T ss_dssp HHHHHHSCCCGGGCCBTTBCCCCEEEEETTTEEEEECCSSSSCCCCGGGSSEECCCHHHHCTTCCSSCHHHHHHHHHHHH
T ss_pred HHHHHhCCCCcccCCCCCCceEEEEEEcCCcceEEEEeccccccccccccccccccccccCCcccccCHHHHHHHHHHHh
Confidence 2332 244321 113457899999999 9999999965321 36899999999999
Q ss_pred ccCCCCCCeEEEEcCCCccccCC----------CCcchhHHHHHHHHHHHHHcCC--cEEEeCccccceecc
Q 039280 331 DVDREVTPWLIAAWHPPWYSTYS----------AHYREVECMRVEMEDLLYYYGV--DIVFNGHVHAYERSN 390 (487)
Q Consensus 331 ~~~r~~~~w~Iv~~H~P~y~~~~----------~~~~~~~~~r~~l~~l~~~~~V--dlvlsGH~H~yeR~~ 390 (487)
+ ++++|+||++|+|++.... ..+......|+.|+++|.+++| +++|+||+|.+++..
T Consensus 320 ~---s~a~W~Iv~s~~p~~~~~~~~g~~~~~~~D~W~g~~~~R~~Ll~~l~~~~v~n~vvLsGDvH~~~~~~ 388 (527)
T 2yeq_A 320 S---STAHWNVLAQQIFFAKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNNVVVLTGDVHASWASN 388 (527)
T ss_dssp H---CCSSEEEEECSSCCSCCCSSCSSSCCEETTSGGGSHHHHHHHHHHHHHTTCCCEEEEECSSSSEEEEE
T ss_pred c---CCCCeEEEEeCCcccccccCCCcccccCccchhccHHHHHHHHHHHHHhCCCCEEEEEcchHHHhHhh
Confidence 8 5689999999999987532 2233345679999999999998 499999999999985
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-32 Score=274.34 Aligned_cols=233 Identities=17% Similarity=0.221 Sum_probs=165.6
Q ss_pred CcEEEEEecCCCCCChHHHH-HH----HHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHH-HH
Q 039280 172 PNRIAVVGDLGLTYNTTTTV-AH----LMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDY-WG 245 (487)
Q Consensus 172 ~~~f~v~gD~~~~~~~~~~l-~~----l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~-~~ 245 (487)
++||+++||+|.+...+..+ +. +.+.+|||||++||++|. +.. +. ...+|.+ |.
T Consensus 3 ~l~f~~igD~g~g~~~q~~va~~m~~~~~~~~pd~vl~~GD~~y~-G~~--~~-----------------~d~~~~~~f~ 62 (342)
T 3tgh_A 3 QLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFID-GVK--GL-----------------NDPAWKNLYE 62 (342)
T ss_dssp CEEEEECCSCBSCCHHHHHHHHHHHHHHHHTTCCEEEECSCSBTT-CCC--ST-----------------TCTHHHHHTT
T ss_pred eEEEEEEecCCCCCchHHHHHHHHHHHHhhcCCCEEEECCCcccC-CCC--cC-----------------ccHHHHHHHH
Confidence 68999999999865433322 22 234699999999999985 321 00 1234543 33
Q ss_pred Hhhhcc--ccCCCEEEecCCcccccCccch-hhHH-------------------hhcccCCCCCCCCCCCcceEEE----
Q 039280 246 RYMQPL--VSNVPTMVIEGEHEIERQAENQ-TFAA-------------------YSSRFAFPSEESGSSSSLYYSF---- 299 (487)
Q Consensus 246 ~~~~~l--~~~~P~~~v~GNHD~~~~~~~~-~~~~-------------------y~~~f~~P~~~~~~~~~~yYsf---- 299 (487)
+..+.+ ...+|+++++||||+..+...+ .+.. ...||.||. .||+|
T Consensus 63 ~~~~~~~~~~~~P~~~vlGNHD~~~~~~aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~--------~yY~~~~~f 134 (342)
T 3tgh_A 63 DVYSEEKGDMYMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKWIMPN--------YWYHYFTHF 134 (342)
T ss_dssp TTSCCGGGTTCSEEEECCCHHHHTSCHHHHHHHHHC---------------CCCSSCEEECSS--------SSEEEEEEE
T ss_pred HHhhhhhhhhCCCEEEeCCCCccCCCchHhhhhhhcccccccccccccccccccCCCCccCCc--------ceEEEEEEe
Confidence 344433 4579999999999997653211 1111 234566664 57765
Q ss_pred Ee---------C----CEEEEEEcCcccCC----------CChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCc
Q 039280 300 NA---------G----GIHFVMLSAYIDYD----------KSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHY 356 (487)
Q Consensus 300 ~~---------g----~v~fi~Ldt~~~~~----------~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~ 356 (487)
.. | .++||+|||..... ...+|++||+++|++ ++|+||++|+|+|++...
T Consensus 135 ~~~~~~~~~~~g~~~~~v~fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~~-----~~~~IV~~HhP~~~~~~~-- 207 (342)
T 3tgh_A 135 TVSSGPSIVKTGHKDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKKI-----ADFIIVVGDQPIYSSGYS-- 207 (342)
T ss_dssp EEC---------CEEEEEEEEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHHH-----CSEEEEECSSCSSCSSTT--
T ss_pred eccccccccccCCCCceEEEEEEeCcccccCCcccccchHHHHHHHHHHHHhhcc-----CCcEEEEECCCCCCCCCC--
Confidence 32 3 39999999964321 135899999999943 479999999999987532
Q ss_pred chhHHHHHHHHHHHHHcCCcEEEeCccccceecccccCCccCCCCcEEEEeCCccccCCcccccCCCCCCCCCCCCCCCC
Q 039280 357 REVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDGGNVEGLDIVHADEPGNCPEPSTTPDM 436 (487)
Q Consensus 357 ~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~p~~~~~~~~~g~vyIv~G~gG~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (487)
.....+++.|++||++|+|+++|+||+|.|+|..+ .|++||++|+||......
T Consensus 208 ~~~~~l~~~l~~ll~~~~VdlvlsGH~H~~~~~~~--------~g~~~iv~Ga~g~~~~~~------------------- 260 (342)
T 3tgh_A 208 RGSSYLAYYLLPLLKDAEVDLYISGHDNNMEVIED--------NDMAHITCGSGSMSQGKS------------------- 260 (342)
T ss_dssp CCCHHHHHHTHHHHHHTTCCEEEECSSSSEEEEEE--------TTEEEEEECCSSCCCCCC-------------------
T ss_pred CCcHHHHHHHHHHHHHcCCCEEEECCCcceeEEee--------CCcEEEEeCccccccccC-------------------
Confidence 23456789999999999999999999999999953 579999999998753211
Q ss_pred CCccccccccCCCCCCcccCCCCCccceecCCcceEEEEEEccceeEEee
Q 039280 437 GGSCAFNFTSGPASGKFCWDRQPDYSAYRESSFGHGILEVLISLSIALTT 486 (487)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~r~~~~G~~~l~~~n~t~~~~~~ 486 (487)
..+++|++|+...+||.+|+| +.++|.++-
T Consensus 261 -------------------~~~~~~s~f~~~~~Gf~~l~v-~~~~l~~~~ 290 (342)
T 3tgh_A 261 -------------------GMKNSKSLFFSSDIGFCVHEL-SNNGIVTKF 290 (342)
T ss_dssp -------------------SSCCTTEEEEECSSEEEEEEE-ETTEEEEEE
T ss_pred -------------------CCCCCcceeecCCCcEEEEEE-ECCEEEEEE
Confidence 123479999999999999998 567888763
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-28 Score=242.13 Aligned_cols=203 Identities=23% Similarity=0.337 Sum_probs=140.5
Q ss_pred CcEEEEEecCCCCCC-------h---HHHHHH-HHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHH
Q 039280 172 PNRIAVVGDLGLTYN-------T---TTTVAH-LMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPR 240 (487)
Q Consensus 172 ~~~f~v~gD~~~~~~-------~---~~~l~~-l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~ 240 (487)
++||+++||+|.... . .+.+.+ +.+.+|||||++||++|.++....+ ..+
T Consensus 6 ~~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~-------------------~~~ 66 (313)
T 1ute_A 6 ILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAK-------------------DKR 66 (313)
T ss_dssp CEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTT-------------------CTH
T ss_pred ceEEEEEcccCCCCCccccCchHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcc-------------------hHH
Confidence 699999999998742 1 122333 3346999999999999864321111 122
Q ss_pred HHHH-HHhhhcccc-CCCEEEecCCcccccCccch-hhHHhhcccCCCCCCCCCCCcceEEEEe------CCEEEEEEcC
Q 039280 241 WDYW-GRYMQPLVS-NVPTMVIEGEHEIERQAENQ-TFAAYSSRFAFPSEESGSSSSLYYSFNA------GGIHFVMLSA 311 (487)
Q Consensus 241 w~~~-~~~~~~l~~-~~P~~~v~GNHD~~~~~~~~-~~~~y~~~f~~P~~~~~~~~~~yYsf~~------g~v~fi~Ldt 311 (487)
|.+. .+.++.... .+|+++++||||........ .|.....+|.+| ..||++.+ ++++||+||+
T Consensus 67 ~~~~~~~~~~~~~l~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~--------~~~y~~~~~~~~~~~~~~~i~lds 138 (313)
T 1ute_A 67 FQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFP--------SPYYRLRFKIPRSNVSVAIFMLDT 138 (313)
T ss_dssp HHHHTTTTSCSGGGTTCCEEECCCHHHHHSCHHHHHHGGGTSTTEECC--------SSSEEEEEECTTSSCEEEEEECCH
T ss_pred HHHHHHHHcCchhhcCCCEEEECCCCccCCCccccccccccCCCccCc--------ccceEEEEecCCCCceEEEEEEEC
Confidence 3222 222222112 78999999999986432110 111122344444 35888888 5899999998
Q ss_pred cccC-----------------CCChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcC
Q 039280 312 YIDY-----------------DKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYG 374 (487)
Q Consensus 312 ~~~~-----------------~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~ 374 (487)
.... ....+|++||+++|++.. .+|+|+++|+|++..... ....++++.|.++|.+++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~wL~~~L~~~~---~~~~iv~~H~p~~~~~~~--~~~~~~~~~l~~~l~~~~ 213 (313)
T 1ute_A 139 VTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAAK---EDYVLVAGHYPVWSIAEH--GPTHCLVKQLLPLLTTHK 213 (313)
T ss_dssp HHHHCCGGGSTTCSCCSCSCHHHHHHHHHHHHHHHHHCC---CSEEEEECSSCSSCCSSS--CCCHHHHHHTHHHHHHTT
T ss_pred hHHhCcCccccccccCCccccchHHHHHHHHHHHHHhCC---CCeEEEEECCCCccCCCC--CCcHHHHHHHHHHHHHcC
Confidence 6411 125799999999999853 479999999999875432 123456788999999999
Q ss_pred CcEEEeCccccceecccccCCccCCCCcEEEEeCCcccc
Q 039280 375 VDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDGGNV 413 (487)
Q Consensus 375 VdlvlsGH~H~yeR~~p~~~~~~~~~g~vyIv~G~gG~~ 413 (487)
|+++|+||+|.+++..+ .+|+.||++|++|..
T Consensus 214 v~~~l~GH~H~~~~~~~-------~~g~~~i~~gs~~~~ 245 (313)
T 1ute_A 214 VTAYLCGHDHNLQYLQD-------ENGLGFVLSGAGNFM 245 (313)
T ss_dssp CSEEEECSSSSEEEEEC-------TTCCEEEEECBSSCC
T ss_pred CcEEEECChhhhhhccC-------CCCceEEEECCCcCc
Confidence 99999999999998852 468999999999864
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A | Back alignment and structure |
|---|
Probab=99.89 E-value=2.2e-22 Score=201.36 Aligned_cols=197 Identities=15% Similarity=0.170 Sum_probs=136.2
Q ss_pred CCcEEEEEecCCCCCC-------------hHHHHHHHHH--cCCCEEEEcCccccccccccCCCccccccccCCCCcccc
Q 039280 171 YPNRIAVVGDLGLTYN-------------TTTTVAHLMS--NHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQE 235 (487)
Q Consensus 171 ~~~~f~v~gD~~~~~~-------------~~~~l~~l~~--~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~ 235 (487)
.++||++++|+|.... ..++++.+.+ .++|+||++||+++. |.
T Consensus 24 ~~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~------~~---------------- 81 (330)
T 3ib7_A 24 PDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADK------GE---------------- 81 (330)
T ss_dssp CSEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTT------CC----------------
T ss_pred CCeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCC------CC----------------
Confidence 3799999999997421 2335566665 689999999999953 21
Q ss_pred hhhHHHHHHHHhhhccc--cCCCEEEecCCcccccCccchhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCcc
Q 039280 236 TYQPRWDYWGRYMQPLV--SNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYI 313 (487)
Q Consensus 236 ~y~~~w~~~~~~~~~l~--~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~ 313 (487)
...+..+.+.++.+. ..+|+++++||||.. ..+....... + ......+|++++++++||+||+..
T Consensus 82 --~~~~~~~~~~l~~l~~~~~~pv~~v~GNHD~~-----~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~i~lds~~ 148 (330)
T 3ib7_A 82 --PAAYRKLRGLVEPFAAQLGAELVWVMGNHDDR-----AELRKFLLDE--A----PSMAPLDRVCMIDGLRIIVLDTSV 148 (330)
T ss_dssp --HHHHHHHHHHHHHHHHHHTCEEEECCCTTSCH-----HHHHHHHHCC--C----CCCSCCCEEEEETTEEEEECCCCC
T ss_pred --HHHHHHHHHHHHHHHhhcCCCEEEeCCCCCCH-----HHHHHHhccc--c----cccCCcceEEEeCCEEEEEecCCC
Confidence 134455556666552 378999999999984 1222221111 1 123457899999999999999875
Q ss_pred cC----CCChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcch-hHHHHHHHHHHHHHcCCcEEEeCcccccee
Q 039280 314 DY----DKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYRE-VECMRVEMEDLLYYYGVDIVFNGHVHAYER 388 (487)
Q Consensus 314 ~~----~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~-~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR 388 (487)
.. ....+|++||++.|++... . .+|+++|+|++......... ....++.+.+++.+++|+++|+||+|....
T Consensus 149 ~~~~~~~~~~~q~~wl~~~l~~~~~--~-~~iv~~Hh~p~~~~~~~~~~~~~~~~~~l~~~l~~~~v~~v~~GH~H~~~~ 225 (330)
T 3ib7_A 149 PGHHHGEIRASQLGWLAEELATPAP--D-GTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTN 225 (330)
T ss_dssp TTCCSBCCCHHHHHHHHHHTTSCCT--T-CEEEECSSCSSCCSSGGGGGGSBSCHHHHHHHHTTSSEEEEEECSSSSCEE
T ss_pred CCCCCCccCHHHHHHHHHHHHhccc--C-CeEEEEECCCCCCCccccccccccCHHHHHHHHhccCceEEEECCCCCccc
Confidence 32 3478999999999998642 2 37888888877543221110 011257788999999999999999999875
Q ss_pred cccccCCccCCCCcEEEEeCCcccc
Q 039280 389 SNRVYNYSLDPCGPVYILVGDGGNV 413 (487)
Q Consensus 389 ~~p~~~~~~~~~g~vyIv~G~gG~~ 413 (487)
.. ..|+.+++.|+.+..
T Consensus 226 ~~--------~~g~~~~~~gs~~~~ 242 (330)
T 3ib7_A 226 AT--------FVGIPVSVASATCYT 242 (330)
T ss_dssp EE--------ETTEEEEECCCSSCE
T ss_pred ce--------ECCEEEEecCcceec
Confidence 52 357888888888753
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 | Back alignment and structure |
|---|
Probab=99.87 E-value=4.4e-22 Score=197.64 Aligned_cols=206 Identities=17% Similarity=0.130 Sum_probs=133.5
Q ss_pred CcEEEEEecCCCCCC--------------------hHHHHHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCC
Q 039280 172 PNRIAVVGDLGLTYN--------------------TTTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIES 231 (487)
Q Consensus 172 ~~~f~v~gD~~~~~~--------------------~~~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~ 231 (487)
++||++++|+|.... ..+.++.+.+.+||+||++||+++..... . .
T Consensus 5 ~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~-~-~------------ 70 (322)
T 2nxf_A 5 VFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRR-R-D------------ 70 (322)
T ss_dssp SEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHH-T-T------------
T ss_pred ceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCc-c-h------------
Confidence 699999999998752 12334445567999999999999642100 0 0
Q ss_pred cccchhhHHHHHHHHhhhccccCCCEEEecCCcccccCccchhhHHhhcccCCCCCC--------CCCCCcceEEEEe-C
Q 039280 232 PIQETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEE--------SGSSSSLYYSFNA-G 302 (487)
Q Consensus 232 ~~~~~y~~~w~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~--------~~~~~~~yYsf~~-g 302 (487)
.....++.+.+.++.+ .+|+++++||||..... ...+...+..+... .......||+|+. +
T Consensus 71 ----~~~~~~~~~~~~l~~~--~~p~~~v~GNHD~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~ 140 (322)
T 2nxf_A 71 ----ASDRALDTVMAELDAC--SVDVHHVWGNHEFYNFS----RPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAP 140 (322)
T ss_dssp ----CHHHHHHHHHHHHHTT--CSEEEECCCHHHHHHCC----HHHHHTSTTCCCC------CEECGGGTCCCEEEEEET
T ss_pred ----HHHHHHHHHHHHHHhc--CCcEEEecCCCCcccCC----HHHHhhhhCCcccccccccccccCCCCceEEEEecCC
Confidence 0012233333444432 68999999999985211 12233333211000 0002356899998 9
Q ss_pred CEEEEEEcCccc----------------------------------------------CCCChHHHHHHHHHhcccCCCC
Q 039280 303 GIHFVMLSAYID----------------------------------------------YDKSSDQYKWLESDLGDVDREV 336 (487)
Q Consensus 303 ~v~fi~Ldt~~~----------------------------------------------~~~~~~Q~~WL~~~L~~~~r~~ 336 (487)
+++||+||+... .....+|++||+++|+++.+.
T Consensus 141 ~~~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~~- 219 (322)
T 2nxf_A 141 NFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHK- 219 (322)
T ss_dssp TEEEEECCTTSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHH-
T ss_pred CEEEEEEcCceecccccCCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHhc-
Confidence 999999998642 112489999999999986422
Q ss_pred CCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHc-CCcEEEeCccccceecccccCCccCCCCcEEEEeCCc
Q 039280 337 TPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYY-GVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDG 410 (487)
Q Consensus 337 ~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~-~VdlvlsGH~H~yeR~~p~~~~~~~~~g~vyIv~G~g 410 (487)
..++||++|+|++....... .....++.+.+++.++ +|+++|+||+|.+++.. +..|+.||+.|+.
T Consensus 220 ~~~~iv~~H~p~~~~~~~~~-~~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~-------~~~g~~~i~~~~~ 286 (322)
T 2nxf_A 220 QERVLIFSHLPVHPCAADPI-CLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCT-------DSSGAQHITLEGV 286 (322)
T ss_dssp TCEEEEEESSCCCTTSSCGG-GSCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEE-------CTTSCEEEECCCG
T ss_pred CCcEEEEEccCCCCCCCCcc-ccccCHHHHHHHHhcCCCeEEEEcCCcCCCCcee-------ccCCceEEEecch
Confidence 23589999999986543210 0001256788999999 79999999999998873 2467888888766
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A | Back alignment and structure |
|---|
Probab=99.87 E-value=4e-21 Score=186.85 Aligned_cols=192 Identities=15% Similarity=0.193 Sum_probs=128.5
Q ss_pred cEEEEEecCCCCC---------Ch----HHHHHHHHHc--CCCEEEEcCccccccccccCCCccccccccCCCCcccchh
Q 039280 173 NRIAVVGDLGLTY---------NT----TTTVAHLMSN--HPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETY 237 (487)
Q Consensus 173 ~~f~v~gD~~~~~---------~~----~~~l~~l~~~--~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y 237 (487)
|||++++|+|... .. .++++.+.+. ++|+||++||+++. +.
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~------~~------------------ 56 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNC------GR------------------ 56 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSS------CC------------------
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCC------CC------------------
Confidence 6899999999874 11 2344555543 68999999999953 21
Q ss_pred hHHHHHHHHhhhccccCCCEEEecCCcccccCccchhhH-Hhhccc-CCCCCCCCCCCcceEEEEeCCEEEEEEcCcccC
Q 039280 238 QPRWDYWGRYMQPLVSNVPTMVIEGEHEIERQAENQTFA-AYSSRF-AFPSEESGSSSSLYYSFNAGGIHFVMLSAYIDY 315 (487)
Q Consensus 238 ~~~w~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~-~y~~~f-~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~~ 315 (487)
...|+.+.+.++.+ .+|+++++||||.... +. .+...| .++.+ .+..+|+++.++++||+||+....
T Consensus 57 ~~~~~~~~~~l~~l--~~p~~~v~GNHD~~~~-----~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~ld~~~~~ 125 (274)
T 3d03_A 57 PEEYQVARQILGSL--NYPLYLIPGNHDDKAL-----FLEYLQPLCPQLGSD----ANNMRCAVDDFATRLLFIDSSRAG 125 (274)
T ss_dssp HHHHHHHHHHHTTC--SSCEEEECCTTSCHHH-----HHHHHGGGSGGGCSC----GGGCCEEECSSSSEEEECCCCCTT
T ss_pred HHHHHHHHHHHHhc--CCCEEEECCCCCCHHH-----HHHHhhhhhcCcccC----CCceEEEEEeCCEEEEEEeCCCCC
Confidence 13355566666655 6899999999998521 11 121112 11111 024678999999999999986432
Q ss_pred ----CCChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcch-hHHHHHHHHHHHHHc-CCcEEEeCccccceec
Q 039280 316 ----DKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYRE-VECMRVEMEDLLYYY-GVDIVFNGHVHAYERS 389 (487)
Q Consensus 316 ----~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~-~~~~r~~l~~l~~~~-~VdlvlsGH~H~yeR~ 389 (487)
....+|++||++.|++. ...++|+++|+|++......... ....++.+.++++++ +|+++|+||+|..+..
T Consensus 126 ~~~~~~~~~~~~wl~~~l~~~---~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~ 202 (274)
T 3d03_A 126 TSKGWLTDETISWLEAQLFEG---GDKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMT 202 (274)
T ss_dssp CSSBCCCHHHHHHHHHHHHHH---TTSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEE
T ss_pred CCCCeeCHHHHHHHHHHHHhC---CCCCEEEEECCCCcccCCcccCcccCcCHHHHHHHHHhCCCceEEEeCCCCCchhh
Confidence 34689999999999985 23469999999988653221110 011246788999999 8999999999998765
Q ss_pred ccccCCccCCCCcEEEEeCCc
Q 039280 390 NRVYNYSLDPCGPVYILVGDG 410 (487)
Q Consensus 390 ~p~~~~~~~~~g~vyIv~G~g 410 (487)
. ..|+.++++++.
T Consensus 203 ~--------~~g~~~~~~pg~ 215 (274)
T 3d03_A 203 Q--------YRQALISTLPGT 215 (274)
T ss_dssp E--------ETTEEEEECCCS
T ss_pred e--------ECCEEEEEcCCc
Confidence 2 245555555443
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.4e-18 Score=179.59 Aligned_cols=194 Identities=16% Similarity=0.218 Sum_probs=122.9
Q ss_pred CCcEEEEEecCCCCCC-----------------------hHH----HHHHHHHcCCCEEEEcCccccccccccCCCcccc
Q 039280 171 YPNRIAVVGDLGLTYN-----------------------TTT----TVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSC 223 (487)
Q Consensus 171 ~~~~f~v~gD~~~~~~-----------------------~~~----~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~ 223 (487)
.++||++++|+|.... ... .++.+.+.+||+||++||+++. +.
T Consensus 38 ~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~------~~---- 107 (443)
T 2xmo_A 38 RNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNN------GE---- 107 (443)
T ss_dssp CCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBSS------CC----
T ss_pred CCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCCC------CC----
Confidence 3799999999998532 122 3444455789999999999953 21
Q ss_pred ccccCCCCcccchhhHHHHHHHHhhhccc-cCCCEEEecCCcccccCccc------------hhhHHhhcccCCCCCCC-
Q 039280 224 YLCQSIESPIQETYQPRWDYWGRYMQPLV-SNVPTMVIEGEHEIERQAEN------------QTFAAYSSRFAFPSEES- 289 (487)
Q Consensus 224 ~~~~~~~~~~~~~y~~~w~~~~~~~~~l~-~~~P~~~v~GNHD~~~~~~~------------~~~~~y~~~f~~P~~~~- 289 (487)
...++.+.+.++.+. ..+|+++++||||....... .....|...|.-.....
T Consensus 108 --------------~~~~~~~~~~l~~l~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (443)
T 2xmo_A 108 --------------KTSHEELAKKLTQVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDA 173 (443)
T ss_dssp --------------HHHHHHHHHHHHHHHHTTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHHHHHHTCCCCCTTC
T ss_pred --------------HHHHHHHHHHHHHHHhCCCeEEEECCcCCCCCccccccCCcccccccccCHHHHHHHhhhcChhhh
Confidence 122344445555542 37899999999998642110 01122333332111000
Q ss_pred ---CCCCcceEEEEeCCEEEEEEcCccc------------CCCChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCC
Q 039280 290 ---GSSSSLYYSFNAGGIHFVMLSAYID------------YDKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSA 354 (487)
Q Consensus 290 ---~~~~~~yYsf~~g~v~fi~Ldt~~~------------~~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~ 354 (487)
......|+.+..++++||+||+... .....+|++||++.|+++.... ..+|+++|+|++.....
T Consensus 174 ~~~~~~~~~y~~~~~~~~~~i~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~~~-~~~Iv~~H~p~~~~~~~ 252 (443)
T 2xmo_A 174 ISSDEFSLSYLAAPSSKVWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKNG-AKLIPVLHHNLTDHNDV 252 (443)
T ss_dssp SEECSSSSCEEECSBSSEEEEECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHHTT-CEEEEECSSBSSCSSCC
T ss_pred hccCCCCceEEEecCCCEEEEEeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHHcC-CeEEEEECCCCcccccc
Confidence 0012234445688999999998742 1246899999999998864322 35899999998764322
Q ss_pred Ccch-hHHHHHHHHHHHHHcCCcEEEeCccccceec
Q 039280 355 HYRE-VECMRVEMEDLLYYYGVDIVFNGHVHAYERS 389 (487)
Q Consensus 355 ~~~~-~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~ 389 (487)
.... ....++.+.+++++++|+++|+||+|.....
T Consensus 253 ~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~~~ 288 (443)
T 2xmo_A 253 IQKGYTINYNQQVIDALTEGAMDFSLSGHIHTQNIR 288 (443)
T ss_dssp --CCSBCTTHHHHHHHHHHTTCCEEEECSSCSCEEE
T ss_pred cccccccccHHHHHHHHHHcCCeEEEECCcccCchh
Confidence 1100 0112567889999999999999999997764
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.55 E-value=3.2e-14 Score=137.11 Aligned_cols=219 Identities=10% Similarity=0.189 Sum_probs=110.1
Q ss_pred CcEEEEEecCCCCCCh-HHHHHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHH----HHHHHH
Q 039280 172 PNRIAVVGDLGLTYNT-TTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPR----WDYWGR 246 (487)
Q Consensus 172 ~~~f~v~gD~~~~~~~-~~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~----w~~~~~ 246 (487)
++||+++||+|..... .+.++.+.+.++|+||++||++..... ........-.... +..+.++.. .+.+.+
T Consensus 5 ~mri~~iSDlH~~~~~~~~~l~~~~~~~~D~vi~~GDl~~~~~~-~~~~~~~~~~~~~---p~~~~~~~~~~~~~~~~~~ 80 (260)
T 2yvt_A 5 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEAL-EKEYERAHLARRE---PNRKVIHENEHYIIETLDK 80 (260)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCCHHH-HHHHHHHHHTTCC---CCTHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeecCCChHHHHHHHHHHHhcCCCEEEECCCCCCccCc-chhhhhhhhhhcc---cchhhhhHHHHHHHHHHHH
Confidence 5899999999987543 445666666799999999999953100 0000000000000 000111100 022333
Q ss_pred hhhccc-cCCCEEEecCCcccccCccchhhHHhhcccC-CCCCCCCCCCcceEEEEeCCEEEEEEcCcccC-CCChHHHH
Q 039280 247 YMQPLV-SNVPTMVIEGEHEIERQAENQTFAAYSSRFA-FPSEESGSSSSLYYSFNAGGIHFVMLSAYIDY-DKSSDQYK 323 (487)
Q Consensus 247 ~~~~l~-~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~-~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~~-~~~~~Q~~ 323 (487)
.++.+. ..+|+++++||||.... ..+........ .|.. ....+ ...++++++.|++++..... ....+++.
T Consensus 81 ~l~~l~~~~~pv~~v~GNHD~~~~---~~~~~~~~~~~~~~~~--~~l~~-~~~~~~~~~~i~g~~~~~~~~~~~~~~~~ 154 (260)
T 2yvt_A 81 FFREIGELGVKTFVVPGKNDAPLK---IFLRAAYEAETAYPNI--RVLHE-GFAGWRGEFEVIGFGGLLTEHEFEEDFVL 154 (260)
T ss_dssp HHHHHHTTCSEEEEECCTTSCCHH---HHHHHHHHTTTTCTTE--EECSS-EEEEETTTEEEEEECSEEESSCCBSSSSC
T ss_pred HHHHHHhcCCcEEEEcCCCCchhh---hhHHHHhhhccCCcce--EEecC-cceEEECCEEEEecCCCcCCCCcCHHHHh
Confidence 334442 26899999999998521 00011111110 0000 00001 12378899999999853211 11122222
Q ss_pred ----HHH----HHhcccCCCCCCeEEEEcCCCccccCCCCc--chhHHHHHHHHHHHHHcCCcEEEeCccccceeccccc
Q 039280 324 ----WLE----SDLGDVDREVTPWLIAAWHPPWYSTYSAHY--REVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVY 393 (487)
Q Consensus 324 ----WL~----~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~--~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~p~~ 393 (487)
|+. +.|++.. . ...|+++|+|++....... .......+.+.+++.+++++++++||+| .... .
T Consensus 155 ~~~~~~~~~~l~~l~~~~--~-~~~Il~~H~pp~~~~~d~~~~~~~~~~~~~l~~~~~~~~~~~vl~GH~H-~~~~-~-- 227 (260)
T 2yvt_A 155 KYPRWYVEYILKFVNELK--P-RRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVG-KGHE-L-- 227 (260)
T ss_dssp EEEHHHHHHHGGGGGGSC--C-CEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSC-CEEE-E--
T ss_pred hcchhhHHHHHHHHHhcC--C-CCEEEEECCCccccccccCcccccccCcHHHHHHHHHhCCCEEEECCcc-CCcE-E--
Confidence 433 3344321 2 2368899999864311110 0000012456678888999999999999 3221 1
Q ss_pred CCccCCCCcEEEEeCCccc
Q 039280 394 NYSLDPCGPVYILVGDGGN 412 (487)
Q Consensus 394 ~~~~~~~g~vyIv~G~gG~ 412 (487)
..++++|..|+.+.
T Consensus 228 -----~~~~~~in~Gs~~~ 241 (260)
T 2yvt_A 228 -----VGNTIVVNPGEFEE 241 (260)
T ss_dssp -----ETTEEEEECCBGGG
T ss_pred -----eCCEEEEeCCCCCC
Confidence 14566777777653
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.54 E-value=2.8e-14 Score=134.29 Aligned_cols=191 Identities=12% Similarity=0.040 Sum_probs=107.5
Q ss_pred CcEEEEEecCCCCCCh-HHHHHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhhhc
Q 039280 172 PNRIAVVGDLGLTYNT-TTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYMQP 250 (487)
Q Consensus 172 ~~~f~v~gD~~~~~~~-~~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~~~ 250 (487)
++||+++||+|..... .+.++.+.+.++|+||++||+++. +.. ...+..+.+.++.
T Consensus 5 ~mri~~iSD~H~~~~~~~~~~~~~~~~~~D~vi~~GDl~~~------~~~-----------------~~~~~~~~~~l~~ 61 (228)
T 1uf3_A 5 VRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPK------AAK-----------------SRDYAAFFRILSE 61 (228)
T ss_dssp CCEEEEEECCTTCHHHHHHHHTHHHHHTCSEEEEESCSSCT------TCC-----------------HHHHHHHHHHHGG
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHhhcCCCEEEECCCCCCC------CCC-----------------HHHHHHHHHHHHh
Confidence 5899999999986432 233444445589999999999952 110 1223334444443
Q ss_pred cccCCCEEEecCCcccccCccchhhHH-hhcccCCCCCCCCCCCcceEEEEeC-CEEEEEEcCcc--cCCCChH------
Q 039280 251 LVSNVPTMVIEGEHEIERQAENQTFAA-YSSRFAFPSEESGSSSSLYYSFNAG-GIHFVMLSAYI--DYDKSSD------ 320 (487)
Q Consensus 251 l~~~~P~~~v~GNHD~~~~~~~~~~~~-y~~~f~~P~~~~~~~~~~yYsf~~g-~v~fi~Ldt~~--~~~~~~~------ 320 (487)
+ .+|+++++||||.... ..+.. +......|... ...+. .+.++ ++.|+.++... .+....+
T Consensus 62 ~--~~pv~~v~GNHD~~~~---~~~~~~~~~~~~~~~~~--~l~~~--~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~ 132 (228)
T 1uf3_A 62 A--HLPTAYVPGPQDAPIW---EYLREAANVELVHPEMR--NVHET--FTFWRGPYLVAGVGGEIADEGEPEEHEALRYP 132 (228)
T ss_dssp G--CSCEEEECCTTSCSHH---HHHHHHHHHHHHCTTEE--ECBTS--EEEETTTEEEEEECSEEESSSCCBSSSSCEEE
T ss_pred c--CCcEEEECCCCCchhH---HHHHhhhhhhccCcceE--Ecccc--eEeeCCCcEEecCCCCcCCCCccChhhcccch
Confidence 3 6799999999998521 11111 00000011100 00111 24556 89999887532 1111222
Q ss_pred --HHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceecccccCCccC
Q 039280 321 --QYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLD 398 (487)
Q Consensus 321 --Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~p~~~~~~~ 398 (487)
+.+|+++.|++.. ..+.|+++|+|++....... . .+.+.+++++++++++++||+|.....
T Consensus 133 ~~~~~~~~~~l~~~~---~~~~il~~H~p~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~GH~H~~~~~--------- 195 (228)
T 1uf3_A 133 AWVAEYRLKALWELK---DYPKIFLFHTMPYHKGLNEQ-G----SHEVAHLIKTHNPLLVLVAGKGQKHEM--------- 195 (228)
T ss_dssp HHHHHHHHGGGGGSC---SCCEEEEESSCBCBTTTBTT-S----BHHHHHHHHHHCCSEEEECCSSCEEEE---------
T ss_pred hhhHHHHHHHHHhCC---CCCeEEEEccCcccCCcccc-C----HHHHHHHHHHhCCCEEEEcccccCccc---------
Confidence 2344455555542 12589999999875311111 1 135667888899999999999932211
Q ss_pred CCCcEEEEeCCcc
Q 039280 399 PCGPVYILVGDGG 411 (487)
Q Consensus 399 ~~g~vyIv~G~gG 411 (487)
..++++|..|+.+
T Consensus 196 ~~~~~~in~Gs~~ 208 (228)
T 1uf3_A 196 LGASWVVVPGDLS 208 (228)
T ss_dssp ETTEEEEECCBGG
T ss_pred cCCceEEEecccC
Confidence 2456677777765
|
| >2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A | Back alignment and structure |
|---|
Probab=99.36 E-value=9.8e-13 Score=132.15 Aligned_cols=188 Identities=15% Similarity=0.108 Sum_probs=95.7
Q ss_pred CcEEEEEecCCCC----CC-------------hHHHHHHHHHcCCCEEEEcCc-cccccccccCCCccccccccCCCCcc
Q 039280 172 PNRIAVVGDLGLT----YN-------------TTTTVAHLMSNHPDLLLLIGD-LSYADLYLTNGTKSSCYLCQSIESPI 233 (487)
Q Consensus 172 ~~~f~v~gD~~~~----~~-------------~~~~l~~l~~~~pdfvl~~GD-l~y~d~~~~~g~~~~~~~~~~~~~~~ 233 (487)
.+||++++|+|.+ .. ....++.+.+.+||+||++|| ++.. +.. .
T Consensus 18 ~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~------~~~------------~ 79 (336)
T 2q8u_A 18 ELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSR------NNP------------S 79 (336)
T ss_dssp EEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCS------SCC------------C
T ss_pred ceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCCEEEECCccccCC------CCC------------C
Confidence 7999999999976 21 122344445579999999999 6531 110 0
Q ss_pred cchhhHHHHHHHHhhhccccCCCEEEecCCcccccCccchhhHHhhccc----CCCCCCCCCCCcceEEEEeCCEEEEEE
Q 039280 234 QETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRF----AFPSEESGSSSSLYYSFNAGGIHFVML 309 (487)
Q Consensus 234 ~~~y~~~w~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f----~~P~~~~~~~~~~yYsf~~g~v~fi~L 309 (487)
......+.+.++.+...+|+++++||||... . ..+..+.... .+-.+.. ....+.++.+++.|+.+
T Consensus 80 ----~~~~~~~~~~l~~L~~~~pv~~i~GNHD~~~-~--~~~~~~l~~~g~nv~v~~~~~---~~~~~~~~~~~v~i~gl 149 (336)
T 2q8u_A 80 ----VVALHDLLDYLKRMMRTAPVVVLPGNHDWKG-L--KLFGNFVTSISSDITFVMSFE---PVDVEAKRGQKVRILPF 149 (336)
T ss_dssp ----HHHHHHHHHHHHHHHHHSCEEECCC-------C--HHHHHHHHHHCSSEEECCSSS---CEEEECTTSCEEEEEEE
T ss_pred ----HHHHHHHHHHHHHHHhcCCEEEECCCCCccc-c--ccHHHHHHhcCCEEEEEeccc---ccCceEEeCCCEEEEEC
Confidence 0112334445555532289999999999864 1 1222222211 1111100 00011122356888888
Q ss_pred cCcccC-------CCChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHH-HHHHHHHHHHcCCcEEEeC
Q 039280 310 SAYIDY-------DKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECM-RVEMEDLLYYYGVDIVFNG 381 (487)
Q Consensus 310 dt~~~~-------~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~-r~~l~~l~~~~~VdlvlsG 381 (487)
+..... ....+|++|+.+.|.+.-+....+.|+++|.|++...... .+ ..+ ...+...+.+.++|++++|
T Consensus 150 p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Ill~H~~~~~~~~~~-~~-~~~~~~~v~~~l~~~~~d~v~~G 227 (336)
T 2q8u_A 150 PYPDESEALRKNEGDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGYA-GI-EQGREIIINRALIPSVVDYAALG 227 (336)
T ss_dssp CCC-------CCSSHHHHHHHHHHHHHHHHHHTCSSEEEEEEESEETTCC----------CCCEECGGGSCTTSSEEEEE
T ss_pred CCCCHHHHHHHhhHHHHHHHHHHHHHHHHhccCCCCCEEEEECccccCCCCCC-Cc-cchhhcccCHHHccccCCEEEEc
Confidence 643211 1124678898888765210123579999999987432110 00 000 0001112334689999999
Q ss_pred ccccceec
Q 039280 382 HVHAYERS 389 (487)
Q Consensus 382 H~H~yeR~ 389 (487)
|+|..+..
T Consensus 228 H~H~~~~~ 235 (336)
T 2q8u_A 228 HIHSFREI 235 (336)
T ss_dssp SCSSCEEE
T ss_pred cccCceEe
Confidence 99988765
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A | Back alignment and structure |
|---|
Probab=99.25 E-value=5.2e-12 Score=121.23 Aligned_cols=187 Identities=8% Similarity=-0.011 Sum_probs=100.1
Q ss_pred cEEEEEecCCCCCC-hHHHHHHHH---Hc--CCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHH
Q 039280 173 NRIAVVGDLGLTYN-TTTTVAHLM---SN--HPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGR 246 (487)
Q Consensus 173 ~~f~v~gD~~~~~~-~~~~l~~l~---~~--~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~ 246 (487)
+||+++||+|.... ..+.++.+. +. ++|+|+++||++.. |.. . .+..+
T Consensus 2 m~i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~------g~~------------------~--~~~~~ 55 (252)
T 1nnw_A 2 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGL------FPY------------------P--KEVIE 55 (252)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSS------SSC------------------H--HHHHH
T ss_pred cEEEEEeecCCCHHHHHHHHHHHHhhhhccCCCCEEEEeCccCCC------CCC------------------H--HHHHH
Confidence 68999999997532 234455555 55 79999999999942 210 0 11222
Q ss_pred hhhccccCCCEEEecCCcccccCccchhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcC--cccCCCChHHHHH
Q 039280 247 YMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSA--YIDYDKSSDQYKW 324 (487)
Q Consensus 247 ~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt--~~~~~~~~~Q~~W 324 (487)
.+..+....|+++++||||.... .+...+. .. ... ..++..... ... ........+|++|
T Consensus 56 ~l~~l~~~~~~~~v~GNhD~~~~-------~~~~~~~-~~------~~~-~~~~~~~~~---~~~~~~~~~~l~~~~~~~ 117 (252)
T 1nnw_A 56 VIKDLTKKENVKIIRGKYDQIIA-------MSDPHAT-DP------GYI-DKLELPGHV---KKALKFTWEKLGHEGREY 117 (252)
T ss_dssp HHHHHHHHSCEEEECCHHHHHHH-------HSCTTCS-SS------GGG-GGSSCCHHH---HHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHhhcCeeEEecchHHHhh-------ccccccC-Cc------ccc-cchhhhHHH---HHHHHHHHHHCCHHHHHH
Confidence 33333222579999999997421 0111110 00 000 000000000 000 0000124678899
Q ss_pred HHHHhcccCCCCCCeEEEEcCCCccccCCC-CcchhHHHHHHHHHHHHHc-CCcEEEeCccccceecccccCCccCCCCc
Q 039280 325 LESDLGDVDREVTPWLIAAWHPPWYSTYSA-HYREVECMRVEMEDLLYYY-GVDIVFNGHVHAYERSNRVYNYSLDPCGP 402 (487)
Q Consensus 325 L~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~-~~~~~~~~r~~l~~l~~~~-~VdlvlsGH~H~yeR~~p~~~~~~~~~g~ 402 (487)
|++.............|++.|++++..... ..... ..+.+..++.++ +++++++||+|...... ..++
T Consensus 118 L~~lp~~~~~~~~~~~i~~~H~~p~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~--------~~~~ 187 (252)
T 1nnw_A 118 LRDLPIYLVDKIGGNEVFGVYGSPINPFDGEVLAEQ--PTSYYEAIMRPVKDYEMLIVASPMYPVDAM--------TRYG 187 (252)
T ss_dssp HHTSCSCEEEEETTEEEEEESSCSSCTTTCCCCSSC--CHHHHHHHHGGGTTSSEEEESTTCSEEEEE--------ETTE
T ss_pred HHhCCceEEEeeCCcEEEEEcCCCCCCcccccCCCC--CHHHHHHHHhcCCCCCEEEECCccccceEe--------cCCe
Confidence 887433321111123678888876422111 11111 124567788888 99999999999865441 2578
Q ss_pred EEEEeCCcccc
Q 039280 403 VYILVGDGGNV 413 (487)
Q Consensus 403 vyIv~G~gG~~ 413 (487)
++|..|+.|..
T Consensus 188 ~~in~Gs~~~~ 198 (252)
T 1nnw_A 188 RVVCPGSVGFP 198 (252)
T ss_dssp EEEEECCSSSC
T ss_pred EEEECCCccCC
Confidence 88999998763
|
| >3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=2.9e-11 Score=118.34 Aligned_cols=199 Identities=15% Similarity=0.076 Sum_probs=107.4
Q ss_pred CcEEEEEecCCCCCChHHHHHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhhhcc
Q 039280 172 PNRIAVVGDLGLTYNTTTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYMQPL 251 (487)
Q Consensus 172 ~~~f~v~gD~~~~~~~~~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~~~l 251 (487)
.+||+++||+|..... + .-.++|+||++||++.. |. ......+.+.++.+
T Consensus 59 ~mri~~iSD~H~~~~~---l---~i~~~D~vi~aGDl~~~------g~------------------~~e~~~~~~~L~~l 108 (296)
T 3rl5_A 59 HTRFVCISDTRSRTDG---I---QMPYGDILLHTGDFTEL------GL------------------PSEVKKFNDWLGNL 108 (296)
T ss_dssp EEEEEEEBCCTTCCTT---C---CCCSCSEEEECSCCSSS------CC------------------HHHHHHHHHHHHTS
T ss_pred CeEEEEEeeCCCCcch---h---ccCCCCEEEECCcccCC------CC------------------HHHHHHHHHHHHhC
Confidence 5899999999987532 1 12479999999999952 22 12234445555554
Q ss_pred ccCCCEEEecCCcccccCccchhhHHhhc----cc----CCCC----CCCCCCCcce----EEEEeCCEEEEEEcCcccC
Q 039280 252 VSNVPTMVIEGEHEIERQAENQTFAAYSS----RF----AFPS----EESGSSSSLY----YSFNAGGIHFVMLSAYIDY 315 (487)
Q Consensus 252 ~~~~P~~~v~GNHD~~~~~~~~~~~~y~~----~f----~~P~----~~~~~~~~~y----Ysf~~g~v~fi~Ldt~~~~ 315 (487)
. ..++++++||||...... .+..... ++ ..+. +...-..+.. -+..+++++|+.......+
T Consensus 109 ~-~~~v~~V~GNHD~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~~~~i~Gl~i~Gsp~tP~~ 185 (296)
T 3rl5_A 109 P-YEYKIVIAGNHELTFDKE--FMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDSEVTVKGFRIYGAPWTPWF 185 (296)
T ss_dssp C-CSEEEECCCTTCGGGCHH--HHHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSSEEEEETTEEEEEECCBCC-
T ss_pred C-CCeEEEEcCCcccccchh--hhhhhhcccccccccccccccchhhhHhhhcCCeEEecCCcEEECCEEEEEecCCCCC
Confidence 2 246899999999864311 0110000 00 0000 0000001111 2456788999885532211
Q ss_pred CC---ChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCc-chhHHHHHHHHHHH-HHcCCcEEEeCccccceecc
Q 039280 316 DK---SSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHY-REVECMRVEMEDLL-YYYGVDIVFNGHVHAYERSN 390 (487)
Q Consensus 316 ~~---~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~-~~~~~~r~~l~~l~-~~~~VdlvlsGH~H~yeR~~ 390 (487)
.. ..++.+++.+.+.+.. . ...|++.|.|++....... .....-.+.|.+++ .+++++++++||+|......
T Consensus 186 ~~~~f~~~~~~~~~~~~~~ip-~--~~dILvTH~PP~g~~D~~~~~~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~~~~ 262 (296)
T 3rl5_A 186 NGWGFNLPRGQSLLDKWNLIP-E--GTDILMTHGPPLGFRDWVPKELQRVGCVELLNTVQRRVRPKLHVFGGIHEGYGTM 262 (296)
T ss_dssp -CCTTBCCTTHHHHHHHTTSC-T--TCSEEEESSCBTTSSCEEGGGTEECSBHHHHHHHHHTTCCSEEEECSCGGGCEEE
T ss_pred CCcCCCcchHHHHHHHHhhCC-C--CCeEEEECCCccccccccccccCcCChHHHHHHHHHhcCCCEEEECCccCCCceE
Confidence 11 1122234444444432 1 2368999999987532110 00000013445555 68899999999999753321
Q ss_pred cccCCccCCCCcEEEEeCCcccc
Q 039280 391 RVYNYSLDPCGPVYILVGDGGNV 413 (487)
Q Consensus 391 p~~~~~~~~~g~vyIv~G~gG~~ 413 (487)
...++++|..|+-|..
T Consensus 263 -------~~g~t~vvNpGs~~~~ 278 (296)
T 3rl5_A 263 -------TDGYTTYINASTCTVS 278 (296)
T ss_dssp -------ECSSCEEEECBCSCTT
T ss_pred -------EECCEEEEECCcCCcC
Confidence 1357889988888764
|
| >3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=1.7e-10 Score=117.96 Aligned_cols=174 Identities=17% Similarity=0.141 Sum_probs=92.3
Q ss_pred CcEEEEEecCCCCCC--------------hHHHHHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchh
Q 039280 172 PNRIAVVGDLGLTYN--------------TTTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETY 237 (487)
Q Consensus 172 ~~~f~v~gD~~~~~~--------------~~~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y 237 (487)
+|||++++|+|.+.. ....++.+.+.+||+||++||++.. +.. .
T Consensus 20 ~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~------~~p------------~---- 77 (386)
T 3av0_A 20 HMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFND------LRP------------P---- 77 (386)
T ss_dssp CCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSS------SSC------------C----
T ss_pred CeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCC------CCC------------C----
Confidence 699999999998742 1223444455799999999999842 110 0
Q ss_pred hHHHHHHHHhhhccc-cCCCEEEecCCcccccCccch-hhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCcccC
Q 039280 238 QPRWDYWGRYMQPLV-SNVPTMVIEGEHEIERQAENQ-TFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYIDY 315 (487)
Q Consensus 238 ~~~w~~~~~~~~~l~-~~~P~~~v~GNHD~~~~~~~~-~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~~ 315 (487)
...+..+.+.++.+. ..+|+++++||||........ ....+...+..-. ...++..+-+++.++.++.....
T Consensus 78 ~~~~~~~~~~l~~L~~~~~pv~~v~GNHD~~~~~~~~~~~~~l~~~v~~l~------~~~v~~~~~~~v~i~gl~~~~~~ 151 (386)
T 3av0_A 78 VKALRIAMQAFKKLHENNIKVYIVAGNHEMPRRLGEESPLALLKDYVKILD------GKDVINVNGEEIFICGTYYHKKS 151 (386)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEECCCGGGSCSSTTSCCGGGGGTTTCEECS------EEEEEEETTEEEEEEEECCCCST
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEcCCCCCCccccccCHHHHHHHHeEEcC------CCcEEEeCCCCEEEEeCCCCCHH
Confidence 112344555555553 358999999999986422110 0000111010000 01122111246888888764322
Q ss_pred CCChHHHHH---HHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCcccccee
Q 039280 316 DKSSDQYKW---LESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYER 388 (487)
Q Consensus 316 ~~~~~Q~~W---L~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR 388 (487)
......+| +...+.. ..+.|+++|.|........+.. .+.. +. ++|++++||+|..++
T Consensus 152 -~~~~~~~~l~~l~~~~~~-----~~~~Ill~H~~~~~~~~~~~~~------~~~~-l~--~~d~v~~GH~H~~~~ 212 (386)
T 3av0_A 152 -KREEMLDKLKNFESEAKN-----YKKKILMLHQGINPYIPLDYEL------EHFD-LP--KFSYYALGHIHKRIL 212 (386)
T ss_dssp -THHHHHHHHHHHHHHHHT-----CSSEEEEECCCCTTTSSSSCSS------CGGG-SC--CCSEEEECSCCSCEE
T ss_pred -HHHHHHHHHHHhhhhccc-----CCCEEEEECcCccccCCCCccc------CHHH-hh--hCCeEEccCCCCCcc
Confidence 11222333 3333321 2348999999875321111100 0111 11 399999999998743
|
| >1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A | Back alignment and structure |
|---|
Probab=99.14 E-value=8e-10 Score=101.77 Aligned_cols=134 Identities=19% Similarity=0.312 Sum_probs=82.9
Q ss_pred CcEEEEEecCCCCCC---hHHHHHHHH-HcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHh
Q 039280 172 PNRIAVVGDLGLTYN---TTTTVAHLM-SNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRY 247 (487)
Q Consensus 172 ~~~f~v~gD~~~~~~---~~~~l~~l~-~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~ 247 (487)
.+||+++||+|.... ..+.+.++. +.++|+|+++||++.. .. .+.
T Consensus 10 mm~i~~iSD~H~~~~~~~~~~~l~~~~~~~~~d~ii~~GDl~~~---------------------------~~----~~~ 58 (192)
T 1z2w_A 10 RMLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTK---------------------------ES----YDY 58 (192)
T ss_dssp -CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBSH---------------------------HH----HHH
T ss_pred ceEEEEEecCCCCccchhHHHHHHHHhccCCCCEEEEcCCCCCH---------------------------HH----HHH
Confidence 479999999997532 223333332 3579999999999831 11 122
Q ss_pred hhccccCCCEEEecCCcccccCccchhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCcccCCCChHHHHHHHH
Q 039280 248 MQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYIDYDKSSDQYKWLES 327 (487)
Q Consensus 248 ~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~ 327 (487)
++.+ ..|+++++||||... .+|. ...++.
T Consensus 59 l~~~--~~~~~~v~GNhD~~~--------------~lp~---------~~~~~~-------------------------- 87 (192)
T 1z2w_A 59 LKTL--AGDVHIVRGDFDENL--------------NYPE---------QKVVTV-------------------------- 87 (192)
T ss_dssp HHHH--CSEEEECCCTTCCCT--------------TSCS---------EEEEEE--------------------------
T ss_pred HHhc--CCCEEEEcCCcCccc--------------cCCc---------ceEEEE--------------------------
Confidence 3332 358999999999742 1221 111111
Q ss_pred HhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceecccccCCccCCCCcEEEEe
Q 039280 328 DLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILV 407 (487)
Q Consensus 328 ~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~p~~~~~~~~~g~vyIv~ 407 (487)
..+.|++.|.+++.... . .+.+..++.+.++|++++||+|..... ...++.+|..
T Consensus 88 ---------~~~~i~l~Hg~~~~~~~----~----~~~l~~~~~~~~~d~vi~GHtH~~~~~--------~~~~~~~inp 142 (192)
T 1z2w_A 88 ---------GQFKIGLIHGHQVIPWG----D----MASLALLQRQFDVDILISGHTHKFEAF--------EHENKFYINP 142 (192)
T ss_dssp ---------TTEEEEEECSCCCCBTT----C----HHHHHHHHHHHSSSEEECCSSCCCEEE--------EETTEEEEEC
T ss_pred ---------CCEEEEEECCCcCCCCC----C----HHHHHHHHHhcCCCEEEECCcCcCccE--------eECCEEEEEC
Confidence 12478888854443211 1 234566777789999999999976533 1257888888
Q ss_pred CCccc
Q 039280 408 GDGGN 412 (487)
Q Consensus 408 G~gG~ 412 (487)
|+.+.
T Consensus 143 GS~~~ 147 (192)
T 1z2w_A 143 GSATG 147 (192)
T ss_dssp CCTTC
T ss_pred Ccccc
Confidence 88765
|
| >3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.14 E-value=6.3e-10 Score=100.95 Aligned_cols=58 Identities=12% Similarity=0.025 Sum_probs=41.9
Q ss_pred eEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceecccccCCccCCCCcEEEEeCCccc
Q 039280 339 WLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDGGN 412 (487)
Q Consensus 339 w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~p~~~~~~~~~g~vyIv~G~gG~ 412 (487)
..|++.|.|++..... .+.+.+++.+++++++++||+|...... ..++.+|..|+.|.
T Consensus 78 ~~i~~~Hg~~~~~~~~--------~~~l~~~~~~~~~d~vi~GHtH~~~~~~--------~~~~~~inpGs~~~ 135 (176)
T 3ck2_A 78 TKIIQTHGHLFDINFN--------FQKLDYWAQEEEAAICLYGHLHVPSAWL--------EGKILFLNPGSISQ 135 (176)
T ss_dssp EEEEEECSGGGTTTTC--------SHHHHHHHHHTTCSEEECCSSCCEEEEE--------ETTEEEEEECCSSS
T ss_pred eEEEEECCCccCCCCC--------HHHHHHHHHhcCCCEEEECCcCCCCcEE--------ECCEEEEECCCCCc
Confidence 4788899887653211 1346677788999999999999865431 25788898898775
|
| >2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.09 E-value=2.2e-10 Score=107.62 Aligned_cols=143 Identities=15% Similarity=0.323 Sum_probs=85.0
Q ss_pred CcEEEEEecCCCCCC---hHHHHHHHH-HcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHh
Q 039280 172 PNRIAVVGDLGLTYN---TTTTVAHLM-SNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRY 247 (487)
Q Consensus 172 ~~~f~v~gD~~~~~~---~~~~l~~l~-~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~ 247 (487)
.+||+++||+|.... ..+.+.++. +.++|+|+++||++.. . ..+.
T Consensus 25 ~m~i~~iSD~H~~~~~~~l~~~l~~~~~~~~~D~vi~~GDl~~~---------------------------~----~l~~ 73 (215)
T 2a22_A 25 GDLVLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCSQ---------------------------E----YVEM 73 (215)
T ss_dssp CEEEEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCCH---------------------------H----HHHH
T ss_pred CcEEEEEecCCCCCChHHHHHHHHHHHhcCCCCEEEECCCCCCH---------------------------H----HHHH
Confidence 479999999998642 223444443 4689999999999831 1 1222
Q ss_pred hhccccCCCEEEecCCcccccCccchhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCcccCCCChHHHHHHHH
Q 039280 248 MQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYIDYDKSSDQYKWLES 327 (487)
Q Consensus 248 ~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~ 327 (487)
++.+ ..|+++++||||....... ..+... +| ....
T Consensus 74 l~~~--~~~v~~V~GNHD~~~~~~~---~~~~~~--lp---------~~~~----------------------------- 108 (215)
T 2a22_A 74 LKNI--TKNVYIVSGDLDSAIFNPD---PESNGV--FP---------EYVV----------------------------- 108 (215)
T ss_dssp HHHH--CSCEEECCCTTCCSCCBCC---GGGTBC--CC---------SEEE-----------------------------
T ss_pred HHHc--CCCEEEecCCCcCcccccC---hhhHhh--CC---------ceEE-----------------------------
Confidence 3333 3589999999997521100 000000 00 0000
Q ss_pred HhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceecccccCCccCCCCcEEEEe
Q 039280 328 DLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILV 407 (487)
Q Consensus 328 ~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~p~~~~~~~~~g~vyIv~ 407 (487)
+ + ....+|++.|.+++.... . .+.+..++.+.++|++++||+|..... ..+++.+|..
T Consensus 109 -~-~----~~~~~i~l~Hg~~~~~~~----~----~~~l~~~~~~~~~d~vl~GHtH~~~~~--------~~~~~~~inp 166 (215)
T 2a22_A 109 -V-Q----IGEFKIGLMHGNQVLPWD----D----PGSLEQWQRRLDCDILVTGHTHKLRVF--------EKNGKLFLNP 166 (215)
T ss_dssp -E-E----ETTEEEEEECSTTSSSTT----C----HHHHHHHHHHHTCSEEEECSSCCCEEE--------EETTEEEEEC
T ss_pred -E-e----cCCeEEEEEcCCccCCCC----C----HHHHHHHHhhcCCCEEEECCcCCCccE--------eeCCEEEEEC
Confidence 0 0 012478888955443211 1 235566777789999999999976432 1257888888
Q ss_pred CCccc
Q 039280 408 GDGGN 412 (487)
Q Consensus 408 G~gG~ 412 (487)
|+.+.
T Consensus 167 GS~~~ 171 (215)
T 2a22_A 167 GTATG 171 (215)
T ss_dssp CCSSC
T ss_pred Ccccc
Confidence 88765
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=9.9e-11 Score=113.89 Aligned_cols=185 Identities=17% Similarity=0.135 Sum_probs=102.9
Q ss_pred CcEEEEEecCCCCCCh-HHHHHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhhhc
Q 039280 172 PNRIAVVGDLGLTYNT-TTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYMQP 250 (487)
Q Consensus 172 ~~~f~v~gD~~~~~~~-~~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~~~ 250 (487)
+.|++++||+|..... .++++.+.+.++|.|+++||++.. |.. ..+..+.++.
T Consensus 11 ~~~i~~iSDiHg~~~~l~~vl~~~~~~~~D~ii~~GDlv~~------g~~--------------------~~~~~~~l~~ 64 (270)
T 3qfm_A 11 MTKIALLSDIHGNTTALEAVLADARQLGVDEYWLLGDILMP------GTG--------------------RRRILDLLDQ 64 (270)
T ss_dssp CEEEEEECCCTTCHHHHHHHHHHHHHTTCCEEEECSCCSSS------SSC--------------------SHHHHHHHHT
T ss_pred ccEEEEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCC------CCC--------------------HHHHHHHHHc
Confidence 6899999999975322 345566666789999999999942 210 0223333333
Q ss_pred cccCCCEEEecCCcccccCccchhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCcccCCCChHHHHHHHHHhc
Q 039280 251 LVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYIDYDKSSDQYKWLESDLG 330 (487)
Q Consensus 251 l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~ 330 (487)
+ .|++++.||||.... ......+.++.. ...+.+ ....+.......++++||++...
T Consensus 65 ~---~~~~~v~GNhD~~~~------~~~~~~~~~~~~-----~~~~~~---------~~~~~~~~~L~~~~~~~L~~LP~ 121 (270)
T 3qfm_A 65 L---PITARVLGNWEDSLW------HGVRKELDSTRP-----SQRYLL---------RQCQYVLEEISLEEIEVLHNQPL 121 (270)
T ss_dssp S---CEEEECCCHHHHHHH------HHHTTCSCTTSH-----HHHHHH---------HHHHHHHTTSCHHHHHHHHSCCS
T ss_pred c---CCEEEEcCChHHHHH------HhhccccCCCcH-----HHHHHH---------HHHHHHHHHcCHHHHHHHHhCCC
Confidence 3 378999999997421 000011111000 000000 00001112346889999987544
Q ss_pred ccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceecccccCCccCCCCcEEEEeCCc
Q 039280 331 DVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDG 410 (487)
Q Consensus 331 ~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~p~~~~~~~~~g~vyIv~G~g 410 (487)
..........|++.|..+......... ...-.+.+..++.+.++|++|+||+|...... ..+|..+|..|+.
T Consensus 122 ~~~~~~~g~~i~lvHg~p~~~~~~~~~-~~~~~~~l~~~~~~~~~d~~i~GHtH~~~~~~-------~~~~~~~iNpGSv 193 (270)
T 3qfm_A 122 QIHRQFGDLTVGISHHLPDKNWGRELI-HTGKQEEFDRLVTHPPCDIAVYGHIHQQLLRY-------GTGGQLIVNPGSI 193 (270)
T ss_dssp EEEEEETTEEEEEESSBTTBSSSSTTS-TTCCHHHHHHTTTTTTCSEEECCSSCSEEEEE-------CTTSCEEEEECCS
T ss_pred ceEEEECCcEEEEEECCCCCCCCceec-CCCcHHHHHHHhcccCCCEEEECCcCchHhee-------ccCCEEEEECCCc
Confidence 321111224677888654432111000 00113456677778899999999999643321 1368899999999
Q ss_pred ccc
Q 039280 411 GNV 413 (487)
Q Consensus 411 G~~ 413 (487)
|..
T Consensus 194 g~p 196 (270)
T 3qfm_A 194 GQP 196 (270)
T ss_dssp SSC
T ss_pred cCC
Confidence 884
|
| >1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A | Back alignment and structure |
|---|
Probab=99.07 E-value=6.9e-10 Score=102.15 Aligned_cols=140 Identities=13% Similarity=0.152 Sum_probs=84.4
Q ss_pred cEEEEEecCCCCCC-hHHHHHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhhhcc
Q 039280 173 NRIAVVGDLGLTYN-TTTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYMQPL 251 (487)
Q Consensus 173 ~~f~v~gD~~~~~~-~~~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~~~l 251 (487)
+||+++||+|.... ..+.++.+.+.++|+|+++||++.. +..+.++.+
T Consensus 26 m~i~~iSD~Hg~~~~l~~~l~~~~~~~~D~ii~~GDl~~~-------------------------------~~~~~l~~l 74 (190)
T 1s3l_A 26 MKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSL-------------------------------FVIKEFENL 74 (190)
T ss_dssp CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCST-------------------------------HHHHHGGGC
T ss_pred eEEEEEeeCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCH-------------------------------HHHHHHHhc
Confidence 89999999995422 2344555556789999999999831 112233333
Q ss_pred ccCCCEEEecCCcccccCccchhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCcccCCCChHHHHHHHHHhcc
Q 039280 252 VSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYIDYDKSSDQYKWLESDLGD 331 (487)
Q Consensus 252 ~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~ 331 (487)
..|+++++||||.... .+..+ + .|.. .. + +. ... ..++
T Consensus 75 --~~~~~~V~GNhD~~~~----~~~~~---~-~~~~----~~--~---------l~--~~~--------------~~~~- 112 (190)
T 1s3l_A 75 --NANIIATYGNNDGERC----KLKEW---L-KDIN----EE--N---------II--DDF--------------ISVE- 112 (190)
T ss_dssp --SSEEEEECCTTCCCHH----HHHHH---H-HHHC----TT--C---------EE--ESE--------------EEEE-
T ss_pred --CCCEEEEeCCCcchHH----HHHHH---h-cccC----hh--h---------hc--ccc--------------eEEe-
Confidence 5799999999997521 11111 1 0100 00 0 00 000 0011
Q ss_pred cCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHc-CCcEEEeCccccceecccccCCccCCCCcEEEEeCCc
Q 039280 332 VDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYY-GVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDG 410 (487)
Q Consensus 332 ~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~-~VdlvlsGH~H~yeR~~p~~~~~~~~~g~vyIv~G~g 410 (487)
...+.|++.|.|++. +.+.+.+. ++|++++||+|..+... .+++.+|..|+.
T Consensus 113 ----~~~~~ill~Hg~~~~---------------l~~~~~~~~~~d~vl~GHtH~~~~~~--------~~~~~~iNpGs~ 165 (190)
T 1s3l_A 113 ----IDDLKFFITHGHHQS---------------VLEMAIKSGLYDVVIYGHTHERVFEE--------VDDVLVINPGEC 165 (190)
T ss_dssp ----ETTEEEEEEESCCHH---------------HHHHHHHHSCCSEEEEECSSCCEEEE--------ETTEEEEECCCS
T ss_pred ----eCCcEEEEECCChHH---------------HHHHHHhcCCCCEEEECCCCCcceEE--------ECCEEEEECCcc
Confidence 123579999988653 23445555 99999999999876541 257888999987
Q ss_pred cc
Q 039280 411 GN 412 (487)
Q Consensus 411 G~ 412 (487)
|.
T Consensus 166 ~~ 167 (190)
T 1s3l_A 166 CG 167 (190)
T ss_dssp SC
T ss_pred cc
Confidence 75
|
| >1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8 | Back alignment and structure |
|---|
Probab=99.05 E-value=5.5e-10 Score=103.04 Aligned_cols=64 Identities=16% Similarity=0.090 Sum_probs=42.3
Q ss_pred eEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceecccccCCccCCC-CcEEEEeCC
Q 039280 339 WLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPC-GPVYILVGD 409 (487)
Q Consensus 339 w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~p~~~~~~~~~-g~vyIv~G~ 409 (487)
++|+++|.|++......+. ...+.+.+++.+++++++|+||+|...... +++. .+ |..|+.+|.
T Consensus 107 ~~i~~~H~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~vi~GHtH~~~~~~--~~g~--~~~g~~~~nvg~ 171 (195)
T 1xm7_A 107 KRILLSHYPAKDPITERYP---DRQEMVREIYFKENCDLLIHGHVHWNREGI--KCAC--KDYRIECINANV 171 (195)
T ss_dssp EEEEEESSCSSCSSCCSCH---HHHHHHHHHHHHTTCSEEEECCCCCCSCC----CCT--TSSSCCEEECBG
T ss_pred cEEEEEccCCcCCCccccc---chHHHHHHHHHHcCCcEEEECCcCCCCccc--cccc--ccCCcceEEEeE
Confidence 4799999998765432221 235778888999999999999999865431 1111 12 555666665
|
| >3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C | Back alignment and structure |
|---|
Probab=99.03 E-value=2.7e-10 Score=116.21 Aligned_cols=190 Identities=17% Similarity=0.172 Sum_probs=98.8
Q ss_pred cEEEEEecCCCCCC----h---------HHHHHH----HHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccc
Q 039280 173 NRIAVVGDLGLTYN----T---------TTTVAH----LMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQE 235 (487)
Q Consensus 173 ~~f~v~gD~~~~~~----~---------~~~l~~----l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~ 235 (487)
|||++++|+|.+.. . ...+++ +.+.+||+||++||+.+.... ..
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~---~~---------------- 61 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNN---PS---------------- 61 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSS---CC----------------
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCCC---CC----------------
Confidence 68999999998754 1 123333 445799999999999832110 00
Q ss_pred hhhHHHHHHHHhhhccccCCCEEEecCCcccccCccchhhHHhhcccCCCCCCCCCCCcceEEEE--eC-CEEEEEEcCc
Q 039280 236 TYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFN--AG-GIHFVMLSAY 312 (487)
Q Consensus 236 ~y~~~w~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~--~g-~v~fi~Ldt~ 312 (487)
...+..+.+.+..+...+|+++++||||.... ..+..+... ++.+........-+.+. .| .+.|+.+.-.
T Consensus 62 --~~~~~~~~~~l~~l~~~~~v~~i~GNHD~~~~---~~~~~~~~~--~~~~~~~~~~~~~v~l~~~~G~~v~i~glp~~ 134 (379)
T 3tho_B 62 --VVALHDLLDYLKRMMRTAPVVVLPGNQDWKGL---KLFGNFVTS--ISSDITFVMSFEPVDVEAKRGQKVRILPFPYP 134 (379)
T ss_dssp --HHHHHHHHHHHHHHHHHSCEEECCCTTSCTTH---HHHHHHHHT--TCSSEEECCSSCCEEEECTTCCEEEEEEECCC
T ss_pred --HHHHHHHHHHHHHHHhCCCEEEEcCCCccccC---ccccccccc--cCCcceeecccceEEEEcCCCCEEEEEECCCC
Confidence 12234445555555323899999999996421 111111111 11110000001112232 23 4667666432
Q ss_pred ccCC----CChHHHHHHHHHhccc---CCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCcccc
Q 039280 313 IDYD----KSSDQYKWLESDLGDV---DREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHA 385 (487)
Q Consensus 313 ~~~~----~~~~Q~~WL~~~L~~~---~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~ 385 (487)
.... ...++.+|+.+.|++. ......+.|+++|.++.........+ ..+...+...+...++|+++.||.|.
T Consensus 135 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~I~l~H~~v~g~~~~~~se-~~~~~~v~~~~~~~~~dyvalGH~H~ 213 (379)
T 3tho_B 135 DESEALRKNEGDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGYAGIE-QGREIIINRALIPSVVDYAALGHIHS 213 (379)
T ss_dssp CCC----CHHHHHHHHHHHHHHHHHHHHHTCSSEEEEEEESCBSCCCC--------CSCCBCGGGSCTTSSEEEEESCSS
T ss_pred CHHHHhhhhccchHHHHHHHHHHHHHHhcCCCCCeEEEEeccccCCccCCCCc-cccccccCHHHcCcCCCEEEcccccC
Confidence 2111 1356789999888721 01123468999998875422100000 00001111222245899999999999
Q ss_pred ceec
Q 039280 386 YERS 389 (487)
Q Consensus 386 yeR~ 389 (487)
.+..
T Consensus 214 ~q~~ 217 (379)
T 3tho_B 214 FREI 217 (379)
T ss_dssp CEEE
T ss_pred CeEe
Confidence 8654
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0 | Back alignment and structure |
|---|
Probab=99.02 E-value=7.8e-10 Score=105.89 Aligned_cols=178 Identities=16% Similarity=0.140 Sum_probs=95.1
Q ss_pred CcEEEEEecCCCCCCh-HHHHHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhhhc
Q 039280 172 PNRIAVVGDLGLTYNT-TTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYMQP 250 (487)
Q Consensus 172 ~~~f~v~gD~~~~~~~-~~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~~~ 250 (487)
.+|++++||+|..... .+.++.+. ++|.++++||++.. |.. . .+..+.+..
T Consensus 3 ~mri~~isDiHg~~~~l~~~l~~~~--~~d~ii~~GDl~~~------g~~------------------~--~~~~~~l~~ 54 (246)
T 3rqz_A 3 AMRILIISDVHANLVALEAVLSDAG--RVDDIWSLGDIVGY------GPR------------------P--RECVELVRV 54 (246)
T ss_dssp CCCEEEECCCTTCHHHHHHHHHHHC--SCSEEEECSCCSSS------SSC------------------H--HHHHHHHHH
T ss_pred CcEEEEEeecCCCHHHHHHHHHhcc--CCCEEEECCCcCCC------CCC------------------H--HHHHHHHHh
Confidence 5899999999964321 12233332 89999999999942 210 0 122233333
Q ss_pred cccCCCEEEecCCcccccCccchhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCcccCCCChHHHHHHHHHhc
Q 039280 251 LVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYIDYDKSSDQYKWLESDLG 330 (487)
Q Consensus 251 l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~ 330 (487)
+. .++.+.||||.... ..+.... +..... ..+ .........++++||++...
T Consensus 55 ~~---~~~~v~GNhD~~~~----------~~~~~~~------------~~~~~~--~~~-~~~~~~l~~~~~~~L~~lp~ 106 (246)
T 3rqz_A 55 LA---PNISVIGNHDWACI----------GRLSLDE------------FNPVAR--FAS-YWTTMQLQAEHLQYLESLPN 106 (246)
T ss_dssp HC---SSEECCCHHHHHHT----------CCCCCC--------------CGGGG--CHH-HHHHHHCCHHHHHHHHHCCS
T ss_pred cC---CCEEEeCchHHHHh----------ccCCccc------------cCHHHH--HHH-HHHHHHcCHHHHHHHHhCCc
Confidence 21 25899999997421 1010000 000000 000 00001235789999997544
Q ss_pred ccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceecc----------ccc--CCcc-
Q 039280 331 DVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSN----------RVY--NYSL- 397 (487)
Q Consensus 331 ~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~----------p~~--~~~~- 397 (487)
.... . .|++.|.++.......... ...+.++|.+++++++|+||+|...... +.. ....
T Consensus 107 ~~~~-~---~i~~~Hg~p~~~~~~~~~~----~~~~~~~l~~~~~~l~i~GHtH~p~~~~~~~~~~~~~~~~~~~~~~~~ 178 (246)
T 3rqz_A 107 RMID-G---DWTVVHGSPRHPIWEYIYN----ARIAALNFPAFDTPLCFVGHTHVPLYIREDEALSNVAPHHPNDGEVLD 178 (246)
T ss_dssp EEEE-T---TEEEESSCSSSTTTCCCCS----HHHHHHHGGGCCSSEEECCSSSSEEEEEHHHHHTTCCCBCCCTTCEEE
T ss_pred EEEE-C---CEEEEECCcCCccccccCC----hHHHHHHHhccCCCEEEECCcCcccEEEecccccccccccccccceee
Confidence 3321 1 3677787665432111111 2456678899999999999999743221 000 0000
Q ss_pred CCCCcEEEEeCCcccc
Q 039280 398 DPCGPVYILVGDGGNV 413 (487)
Q Consensus 398 ~~~g~vyIv~G~gG~~ 413 (487)
-+.|...|..|+-|..
T Consensus 179 l~~g~~ivNpGSVG~P 194 (246)
T 3rqz_A 179 VSSGRYIINPGAVGQP 194 (246)
T ss_dssp CSSSCEEEEECCSSCC
T ss_pred cCCCeEEEECCccCCC
Confidence 0236788999999885
|
| >2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.93 E-value=6.3e-09 Score=94.62 Aligned_cols=62 Identities=10% Similarity=0.106 Sum_probs=42.2
Q ss_pred CcEEEEEecCCCCCC---hHHHHHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhh
Q 039280 172 PNRIAVVGDLGLTYN---TTTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYM 248 (487)
Q Consensus 172 ~~~f~v~gD~~~~~~---~~~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~ 248 (487)
.+||+++||+|...+ ..+.++++. .++|+|+++||++.. +..+.+
T Consensus 22 mmri~~iSD~Hg~~~~~~l~~~l~~~~-~~~D~ii~~GD~~~~-------------------------------~~~~~l 69 (178)
T 2kkn_A 22 VKRFLLISDSHVPVRMASLPDEILNSL-KEYDGVIGLGDYVDL-------------------------------DTVILL 69 (178)
T ss_dssp CEEEEEECCCCBTTTTCCCCHHHHHGG-GGCSEEEESSCBSCH-------------------------------HHHHHH
T ss_pred ceEEEEEecccCCCCHHHHHHHHHHHh-cCCCEEEECCCCCCH-------------------------------HHHHHH
Confidence 379999999995222 234455544 689999999999831 112223
Q ss_pred hccccCCCEEEecCCcccc
Q 039280 249 QPLVSNVPTMVIEGEHEIE 267 (487)
Q Consensus 249 ~~l~~~~P~~~v~GNHD~~ 267 (487)
+.+ ..|+++++||||..
T Consensus 70 ~~~--~~~v~~V~GNhD~~ 86 (178)
T 2kkn_A 70 EKF--SKEFYGVHGNMDYP 86 (178)
T ss_dssp HHH--TSSEEECCCSSSCG
T ss_pred Hhc--CCCEEEEECCCCcH
Confidence 333 36899999999974
|
| >1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A | Back alignment and structure |
|---|
Probab=98.92 E-value=8.3e-09 Score=103.28 Aligned_cols=73 Identities=22% Similarity=0.352 Sum_probs=49.6
Q ss_pred cEEEEEecCCCCCCh--------------HHHHHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhh
Q 039280 173 NRIAVVGDLGLTYNT--------------TTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQ 238 (487)
Q Consensus 173 ~~f~v~gD~~~~~~~--------------~~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~ 238 (487)
|||++++|+|.+... ...++.+.+.+||+||++||++... . +. .
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~------~------------~~----~ 58 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSS------R------------PS----P 58 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSS------S------------CC----H
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCC------C------------CC----H
Confidence 689999999997531 1234444567999999999998421 1 00 1
Q ss_pred HHHHHHHHhhhccc-cCCCEEEecCCcccc
Q 039280 239 PRWDYWGRYMQPLV-SNVPTMVIEGEHEIE 267 (487)
Q Consensus 239 ~~w~~~~~~~~~l~-~~~P~~~v~GNHD~~ 267 (487)
..+..+.+.++.+. ..+|+++++||||..
T Consensus 59 ~~~~~~~~~l~~l~~~~~~v~~v~GNHD~~ 88 (333)
T 1ii7_A 59 GTLKKAIALLQIPKEHSIPVFAIEGNHDRT 88 (333)
T ss_dssp HHHHHHHHHHHHHHTTTCCEEEECCTTTCC
T ss_pred HHHHHHHHHHHHHHHCCCcEEEeCCcCCCc
Confidence 22344555565553 368999999999985
|
| >3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.73 E-value=2.5e-07 Score=95.16 Aligned_cols=40 Identities=28% Similarity=0.315 Sum_probs=30.9
Q ss_pred CCcEEEEEecCCCCCCh-------------HHHHHHHHHcCCCEEEEcCcccc
Q 039280 171 YPNRIAVVGDLGLTYNT-------------TTTVAHLMSNHPDLLLLIGDLSY 210 (487)
Q Consensus 171 ~~~~f~v~gD~~~~~~~-------------~~~l~~l~~~~pdfvl~~GDl~y 210 (487)
..+||++++|+|.+... ...++.+.+.+||+||++||+..
T Consensus 31 ~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd 83 (431)
T 3t1i_A 31 NTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFH 83 (431)
T ss_dssp GEEEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBS
T ss_pred CCEEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhcCCCEEEEcCcccc
Confidence 47999999999987431 23445555679999999999985
|
| >4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B* | Back alignment and structure |
|---|
Probab=98.64 E-value=3.1e-07 Score=94.07 Aligned_cols=40 Identities=23% Similarity=0.300 Sum_probs=31.1
Q ss_pred CCcEEEEEecCCCCCC---------h----HHHHHHHHHcCCCEEEEcCcccc
Q 039280 171 YPNRIAVVGDLGLTYN---------T----TTTVAHLMSNHPDLLLLIGDLSY 210 (487)
Q Consensus 171 ~~~~f~v~gD~~~~~~---------~----~~~l~~l~~~~pdfvl~~GDl~y 210 (487)
..+||++++|+|.+.. . .++++.+.+.+||+||++||++.
T Consensus 12 ~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd 64 (417)
T 4fbw_A 12 NTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFH 64 (417)
T ss_dssp TCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBS
T ss_pred CCeEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhcCCCEEEEcCcccc
Confidence 4799999999998743 1 23445555689999999999985
|
| >2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.63 E-value=1.7e-07 Score=100.27 Aligned_cols=173 Identities=16% Similarity=0.144 Sum_probs=94.1
Q ss_pred CcEEEEEecCCCCCC------------------hHHHHHHHHHcCCC-EEEEcCccccccccccCCCccccccccCCCCc
Q 039280 172 PNRIAVVGDLGLTYN------------------TTTTVAHLMSNHPD-LLLLIGDLSYADLYLTNGTKSSCYLCQSIESP 232 (487)
Q Consensus 172 ~~~f~v~gD~~~~~~------------------~~~~l~~l~~~~pd-fvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~ 232 (487)
.++|++++|+|.... ....++++.+..|+ +++.+||++....+
T Consensus 29 ~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~------------------ 90 (552)
T 2z1a_A 29 TLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLY------------------ 90 (552)
T ss_dssp EEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHH------------------
T ss_pred eEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHH------------------
Confidence 699999999996421 12345666667788 88999999842110
Q ss_pred ccchhhHHHHHHHHhhhccccCCCEEEecCCcccccCccchhhHHhhcccCCCC---CC--CC-----CCCcceEEEEeC
Q 039280 233 IQETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPS---EE--SG-----SSSSLYYSFNAG 302 (487)
Q Consensus 233 ~~~~y~~~w~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~---~~--~~-----~~~~~yYsf~~g 302 (487)
.. + .......+.|..+ . +-++++||||+... ...+..+.....+|. |- .. .....|..++.+
T Consensus 91 -~~-~-~~~~~~~~~ln~l--g-~d~~~lGNHEfd~g--~~~l~~~l~~~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~~ 162 (552)
T 2z1a_A 91 -FN-Q-YRGLADRYFMHRL--R-YRAMALGNHEFDLG--PGPLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVG 162 (552)
T ss_dssp -HH-H-HTTHHHHHHHHHT--T-CCEEECCGGGGTTC--HHHHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEET
T ss_pred -HH-H-hCCcHHHHHHHhc--C-CCccccccccccCC--HHHHHHHHhhCCCCEEEEEEecCCCcccccccCCeEEEEEC
Confidence 00 0 0112233334433 2 23678999999632 233333433333221 10 00 012346677888
Q ss_pred C--EEEEEEcCccc-----------CCCChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHH
Q 039280 303 G--IHFVMLSAYID-----------YDKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDL 369 (487)
Q Consensus 303 ~--v~fi~Ldt~~~-----------~~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l 369 (487)
+ +.||.+.+... +....++.+.+.+.|++ .....+|+++|.|.... ..+
T Consensus 163 G~kIgiiG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~---~~~d~iIvL~H~g~~~d---------------~~l 224 (552)
T 2z1a_A 163 GERVGIIGLTTPDTREISNPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYGED---------------LKL 224 (552)
T ss_dssp TEEEEEEEEECTTHHHHSCCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHHH---------------HHH
T ss_pred CEEEEEEEecccchhhccCCCCCcEECCHHHHHHHHHHHHHh---cCCCEEEEEeCCCcchH---------------HHH
Confidence 7 45566654310 00011344444445553 23445999999886421 122
Q ss_pred HHH-cCCcEEEeCcccccee
Q 039280 370 LYY-YGVDIVFNGHVHAYER 388 (487)
Q Consensus 370 ~~~-~~VdlvlsGH~H~yeR 388 (487)
..+ .+||++|+||+|....
T Consensus 225 a~~~~gvDlIlgGHtH~~~~ 244 (552)
T 2z1a_A 225 ARRLVGVQVIVGGHSHTLLG 244 (552)
T ss_dssp HTTCSSCCEEEECSSCCCBS
T ss_pred HHhCCCccEEEeCCcCcccc
Confidence 233 5899999999998654
|
| >1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=98.54 E-value=2.4e-07 Score=86.31 Aligned_cols=76 Identities=13% Similarity=0.239 Sum_probs=46.6
Q ss_pred CcEEEEEecCCCCCC-hHHHHHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhhhc
Q 039280 172 PNRIAVVGDLGLTYN-TTTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYMQP 250 (487)
Q Consensus 172 ~~~f~v~gD~~~~~~-~~~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~~~ 250 (487)
.+|++++||+|.... ..+.++.+.+.++|+|+++||++.. |... ...+.|. -.+..+.++.
T Consensus 25 mmki~~iSD~H~~~~~l~~~l~~~~~~~~d~vi~~GDl~~~------g~~~----------~~~~~~~--~~~~~~~l~~ 86 (208)
T 1su1_A 25 MMKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNH------GPRN----------ALPEGYA--PAKVVERLNE 86 (208)
T ss_dssp CCEEEEECCCTTBHHHHHHHHHHHHHHTCSEEEECSCCSCC------CTTS----------CCCTTBC--HHHHHHHHHT
T ss_pred cEEEEEEEcCCCCHHHHHHHHHHHHhcCCCEEEECCCcccc------Cccc----------ccccccC--HHHHHHHHHh
Confidence 379999999997532 2334555555689999999999952 1100 0001110 1233344444
Q ss_pred cccCCCEEEecCCcccc
Q 039280 251 LVSNVPTMVIEGEHEIE 267 (487)
Q Consensus 251 l~~~~P~~~v~GNHD~~ 267 (487)
+ ..|+++++||||..
T Consensus 87 ~--~~~v~~V~GNHD~~ 101 (208)
T 1su1_A 87 V--AHKVIAVRGNCDSE 101 (208)
T ss_dssp T--GGGEEECCCTTCCH
T ss_pred c--CCceEEEECCCchH
Confidence 3 25899999999974
|
| >4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A* | Back alignment and structure |
|---|
Probab=98.50 E-value=1.9e-06 Score=89.01 Aligned_cols=40 Identities=23% Similarity=0.287 Sum_probs=31.3
Q ss_pred CCcEEEEEecCCCCCCh-------------HHHHHHHHHcCCCEEEEcCcccc
Q 039280 171 YPNRIAVVGDLGLTYNT-------------TTTVAHLMSNHPDLLLLIGDLSY 210 (487)
Q Consensus 171 ~~~~f~v~gD~~~~~~~-------------~~~l~~l~~~~pdfvl~~GDl~y 210 (487)
..+||++++|+|.+... ..+++.+.+.+||+||++||++.
T Consensus 75 ~~mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd 127 (472)
T 4fbk_A 75 NTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFH 127 (472)
T ss_dssp TCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCSBS
T ss_pred CCeEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhcCCCEEEEcCcccc
Confidence 47999999999987431 23455556789999999999985
|
| >1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A | Back alignment and structure |
|---|
Probab=98.44 E-value=3.4e-07 Score=97.05 Aligned_cols=184 Identities=18% Similarity=0.131 Sum_probs=92.2
Q ss_pred CCcEEEEEecCCCCCC-----------hHHHHHHHHHc----CC-CEEEEcCccccccccccCCCccccccccCCCCccc
Q 039280 171 YPNRIAVVGDLGLTYN-----------TTTTVAHLMSN----HP-DLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQ 234 (487)
Q Consensus 171 ~~~~f~v~gD~~~~~~-----------~~~~l~~l~~~----~p-dfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~ 234 (487)
..++|++++|+|.... ....++++.+. ++ +++|.+||++..... .
T Consensus 7 ~~l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~-------------------~ 67 (516)
T 1hp1_A 7 YKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPE-------------------S 67 (516)
T ss_dssp EEEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHH-------------------H
T ss_pred eEEEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcch-------------------h
Confidence 3689999999998632 12345555432 46 699999999732100 0
Q ss_pred chhhHHHHHHHHhhhccccCCCEEEecCCcccccCccchhhHHhhcccCCCC---C----CCC-CCCcceEEEEeCCE--
Q 039280 235 ETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPS---E----ESG-SSSSLYYSFNAGGI-- 304 (487)
Q Consensus 235 ~~y~~~w~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~---~----~~~-~~~~~yYsf~~g~v-- 304 (487)
.. .......+.|..+ . +-++++||||+... ...+........+|. | ..+ .....|.-++.+++
T Consensus 68 ~~--~~~~~~~~~ln~l--g-~d~~~~GNHEfd~g--~~~l~~~~~~~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kI 140 (516)
T 1hp1_A 68 DL--QDAEPDFRGMNLV--G-YDAMAIGNHEFDNP--LTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKI 140 (516)
T ss_dssp HT--TTTHHHHHHHHHH--T-CCEEECCGGGGSSC--HHHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEE
T ss_pred hh--cCCcHHHHHHhcc--C-CCEEeeccccccCC--HHHHHHHHhhCCCCEEEeEEEECCCCCcccCCeEEEEECCEEE
Confidence 00 0112223334443 2 23678999999532 122333332222221 1 000 01234556788874
Q ss_pred EEEEEcCccc--CC-C----------ChHH-HHHHHHHhcccCCCCCCeEEEEcCCCccccCCCC-c-chhHHHHHHHHH
Q 039280 305 HFVMLSAYID--YD-K----------SSDQ-YKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAH-Y-REVECMRVEMED 368 (487)
Q Consensus 305 ~fi~Ldt~~~--~~-~----------~~~Q-~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~-~-~~~~~~r~~l~~ 368 (487)
-||.+.+... +. . ..+. .+|++ +|++. .....+|+++|.|........ . ... ..+..
T Consensus 141 giiG~~~~~~~~~~~p~~~~~~~~~d~~~~~~~~v~-~l~~~--~~~d~iI~l~H~g~~~~~~~~~~~~~~----~~la~ 213 (516)
T 1hp1_A 141 AVIGLTTDDTAKIGNPEYFTDIEFRKPADEAKLVIQ-ELQQT--EKPDIIIAATHMGHYDNGEHGSNAPGD----VEMAR 213 (516)
T ss_dssp EEEEEECTTTTTSSSCCSCTTEEECCHHHHHHHHHH-HHHHH--TCCSEEEEEEESCCCGGGCCTTSCCCH----HHHHH
T ss_pred EEEEecccCcccccCcCccCCcEEeCHHHHHHHHHH-HHHhc--CCCCEEEEEecCCccCCCcccccCchH----HHHHH
Confidence 5566654321 11 0 0122 23333 34421 134579999999975432110 0 111 12222
Q ss_pred HHHHcCCcEEEeCccccce
Q 039280 369 LLYYYGVDIVFNGHVHAYE 387 (487)
Q Consensus 369 l~~~~~VdlvlsGH~H~ye 387 (487)
.+...+||++|+||+|...
T Consensus 214 ~~~~~~iDlilgGHtH~~~ 232 (516)
T 1hp1_A 214 ALPAGSLAMIVGGHSQDPV 232 (516)
T ss_dssp HSCTTSSSEEECCSSCCBC
T ss_pred hCCCCceeEEECCCCCccc
Confidence 3333459999999999754
|
| >3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.40 E-value=1.1e-06 Score=93.38 Aligned_cols=203 Identities=14% Similarity=0.138 Sum_probs=101.7
Q ss_pred CcEEEEEecCCCCCC-----------------hHHHHHHHHHcCCC-EEEEcCccccccccccCCCccccccccCCCCcc
Q 039280 172 PNRIAVVGDLGLTYN-----------------TTTTVAHLMSNHPD-LLLLIGDLSYADLYLTNGTKSSCYLCQSIESPI 233 (487)
Q Consensus 172 ~~~f~v~gD~~~~~~-----------------~~~~l~~l~~~~pd-fvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~ 233 (487)
.++|++++|+|.... ....++++.+..++ ++|.+||++.....
T Consensus 19 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs~~------------------- 79 (527)
T 3qfk_A 19 NIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSPF------------------- 79 (527)
T ss_dssp EEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSSSHH-------------------
T ss_pred cEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCCcHH-------------------
Confidence 689999999997531 12345566656676 77889999842100
Q ss_pred cchhhH----HHHHHHHhhhccccCCCEEEecCCcccccCccchhhHHhhcccCCCCCCC-----C--CCCcceEEEEeC
Q 039280 234 QETYQP----RWDYWGRYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEES-----G--SSSSLYYSFNAG 302 (487)
Q Consensus 234 ~~~y~~----~w~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~-----~--~~~~~yYsf~~g 302 (487)
. .|.. .+....+.|..+ ... ++++||||+... ...+..+.....+|.-.. + .....|.-++.+
T Consensus 80 ~-~~~~~~~~~~~~~~~~ln~l--g~D-~~t~GNHefd~G--~~~l~~~~~~~~~p~l~aNv~~~g~p~~~~py~i~e~~ 153 (527)
T 3qfk_A 80 C-NYLIAHSGSSQPLVDFYNRM--AFD-FGTLGNHEFNYG--LPYLKDTLRRLNYPVLCANIYENDSTLTDNGVKYFQVG 153 (527)
T ss_dssp H-HHHHHTTCSSHHHHHHHHHT--CCC-EECCCGGGGTTC--HHHHHHHHHHCSSCBCCSSEEETTEESSSCSEEEEEET
T ss_pred H-HHHhhcccCcchHHHHHHhc--CCc-EEeccccccccC--HHHHHHHHHhCCCCEEEeEeeeCCCCccCCCEEEEEEC
Confidence 0 0000 012233334433 233 567999998532 233334433333332111 0 011336667888
Q ss_pred CEE--EEEEcCcc--cCCC--------ChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCC-CC-----cchhHHHHH
Q 039280 303 GIH--FVMLSAYI--DYDK--------SSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYS-AH-----YREVECMRV 364 (487)
Q Consensus 303 ~v~--fi~Ldt~~--~~~~--------~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~-~~-----~~~~~~~r~ 364 (487)
+++ ||.+.+.. .+.. .....+.+++.+++.. .+...+|+++|.+...... .. ..+..
T Consensus 154 G~kIgviG~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~v~~l~-~~~D~iIvl~H~G~~~d~~~~~~~~~~~~e~~---- 228 (527)
T 3qfk_A 154 DQTVGVIGLTTQFIPHWEQPEHIQSLTFHSAFEILQQYLPEMK-RHADIIVVCYHGGFEKDLESGTPTEVLTGENE---- 228 (527)
T ss_dssp TEEEEEEEEECTTGGGTSCHHHHTTEEECCHHHHHHHHHHHHH-HHCSEEEEEEECCCSBCTTTCCBSSCCSSSCC----
T ss_pred CEEEEEEEeccCCcccccCccccCCcEEcCHHHHHHHHHHHHH-hCCCEEEEEeCcCcccccccCccccccccchH----
Confidence 754 55555431 1110 1122333444333322 2355699999987643210 00 01110
Q ss_pred HHHHHHHH--cCCcEEEeCccccceecccccCCccCCCCcEEEEeCCcccc
Q 039280 365 EMEDLLYY--YGVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDGGNV 413 (487)
Q Consensus 365 ~l~~l~~~--~~VdlvlsGH~H~yeR~~p~~~~~~~~~g~vyIv~G~gG~~ 413 (487)
...|.++ .+||++|+||+|...-. . -+++..+.+|+-|..
T Consensus 229 -~~~la~~~~~giDlIlgGHtH~~~~~--~------v~~~~ivqag~~g~~ 270 (527)
T 3qfk_A 229 -GYAMLEAFSKDIDIFITGHQHRQIAE--R------FKQTAVIQPGTRGTT 270 (527)
T ss_dssp -HHHHHHHHGGGCSEEECCSSCCEEEE--E------ETTEEEEEECSTTSE
T ss_pred -HHHHHHhcCCCCcEEEECCCCcccce--E------ECCEEEeccChhhCE
Confidence 1122222 48999999999986531 1 135555666666654
|
| >2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A | Back alignment and structure |
|---|
Probab=98.37 E-value=3.4e-06 Score=90.10 Aligned_cols=152 Identities=15% Similarity=0.092 Sum_probs=78.1
Q ss_pred HHHHHHc--C--CC-EEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhhhccccCCCEEEecCCcc
Q 039280 191 VAHLMSN--H--PD-LLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYMQPLVSNVPTMVIEGEHE 265 (487)
Q Consensus 191 l~~l~~~--~--pd-fvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~~~l~~~~P~~~v~GNHD 265 (487)
++++.+. + || ++|.+||++..... . .+ .......+.|..+ ..+++ + ||||
T Consensus 111 v~~~r~~~~~~gpd~Lll~~GD~~~gs~~-------------------~-~~-~~g~~~~~~ln~l--g~d~~-~-GNHE 165 (562)
T 2wdc_A 111 IRDQKARVEAEGGKALVLDGGDTWTNSGL-------------------S-LL-TRGEAVVRWQNLV--GVDHM-V-SHWE 165 (562)
T ss_dssp HHHHHHHHHHTTCCEEEEECSCCSSSSHH-------------------H-HH-HTTHHHHHHHHHH--TCCEE-C-CSGG
T ss_pred HHHHHhhhhcCCCCEEEEeCCCCCCcchh-------------------h-hh-hCCHHHHHHHHhh--CCcEE-e-cchh
Confidence 4555444 4 88 89999999942110 0 00 0112233444444 45665 6 9999
Q ss_pred cccCccchhhHHhhcccCCCCCCC-------C-CCCcceEEEEeCC--EEEEEEcCcc-------------cCCCChHHH
Q 039280 266 IERQAENQTFAAYSSRFAFPSEES-------G-SSSSLYYSFNAGG--IHFVMLSAYI-------------DYDKSSDQY 322 (487)
Q Consensus 266 ~~~~~~~~~~~~y~~~f~~P~~~~-------~-~~~~~yYsf~~g~--v~fi~Ldt~~-------------~~~~~~~Q~ 322 (487)
+... ...+..+...+.+|.-.. + .....|.-++.++ +-||.+.+.. .+....+..
T Consensus 166 fd~G--~~~l~~~l~~~~~p~L~aNv~~~~~~~~~~~py~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (562)
T 2wdc_A 166 WTLG--RERVEELLGLFRGEFLSYNIVDDLFGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERRL 243 (562)
T ss_dssp GGGC--HHHHHHHHHHCCSEECCSSCEETTTCCBSSCSEEEEEETTEEEEEEEECCTTHHHHSCGGGGTTEECCCCHHHH
T ss_pred cccC--HHHHHHHHHhCCCCEEEEEEEecCCCCcccCCeEEEEECCeEEEEEeeccCcccccccccccCCcEEeCHHHHH
Confidence 8532 233344443333321110 0 0122455677887 4556654321 111122333
Q ss_pred HHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHH-cCCcEEEeCccccce
Q 039280 323 KWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYY-YGVDIVFNGHVHAYE 387 (487)
Q Consensus 323 ~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~-~~VdlvlsGH~H~ye 387 (487)
+-+.++|++ .....+|+++|.|.... ..+.++ .+||++|+||+|...
T Consensus 244 ~~~v~~l~~---~~~d~iIvLsH~g~~~d---------------~~la~~~~giDlIlgGHtH~~~ 291 (562)
T 2wdc_A 244 QEAVDKARA---EGANAVVLLSHNGMQLD---------------AALAERIRGIDLILSGHTHDLT 291 (562)
T ss_dssp HHHHHHHHH---TTCSEEEEEECSCHHHH---------------HHHHTTSSSCCEEEECSSCCCC
T ss_pred HHHHHHHHH---CCCCEEEEEeCCCCcch---------------HHHHhcCCCCcEEEeCCCCCCC
Confidence 333334443 23456999999886321 123333 489999999999764
|
| >1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=98.34 E-value=6.4e-06 Score=79.73 Aligned_cols=184 Identities=15% Similarity=0.167 Sum_probs=98.5
Q ss_pred CcEEEEEecCCCCCChH---HHHHHHHHc-CCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHh
Q 039280 172 PNRIAVVGDLGLTYNTT---TTVAHLMSN-HPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRY 247 (487)
Q Consensus 172 ~~~f~v~gD~~~~~~~~---~~l~~l~~~-~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~ 247 (487)
.+||+++||++...... ..+.++.+. ++|+++..||.+.. |.. +. ....+.
T Consensus 4 ~m~ilf~GDv~G~~G~~~l~~~l~~lr~~~~~d~vi~Ngen~~g------G~g------------~~-------~~~~~~ 58 (281)
T 1t71_A 4 SIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTH------GKG------------LS-------LKHYEF 58 (281)
T ss_dssp CCEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTT------TSS------------CC-------HHHHHH
T ss_pred eEEEEEECCcCChHHHHHHHHHHHHHHHhcCCCEEEEcCCCCCC------CCC------------cC-------HHHHHH
Confidence 58999999998543222 234555544 68999999998853 210 10 112222
Q ss_pred hhccccCCCEEEecCCcccccCccchhhHHhhcc--c----CCCCCCCCC-CCcceEEEEeCCEEE--EEEcCcccCC--
Q 039280 248 MQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSR--F----AFPSEESGS-SSSLYYSFNAGGIHF--VMLSAYIDYD-- 316 (487)
Q Consensus 248 ~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~--f----~~P~~~~~~-~~~~yYsf~~g~v~f--i~Ldt~~~~~-- 316 (487)
|..+ .+- .++.||||++... ....|.+. . ++|...... .+..|.-++.+++++ |.|-+...+.
T Consensus 59 ln~~--G~D-a~TlGNHefD~g~---~~~~~l~~~~~v~~aN~p~~~~~~~~g~g~~I~e~~G~kIgVIgl~g~~~f~~~ 132 (281)
T 1t71_A 59 LKEA--GVN-YITMGNHTWFQKL---DLAVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPF 132 (281)
T ss_dssp HHHH--TCC-EEECCTTTTCCGG---GHHHHTTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSS
T ss_pred HHhc--CCC-EEEEccCcccCCc---cHHHHhhhcCEEeeccCCcccccccCCCCeEEEEECCEEEEEEEeeccccccCc
Confidence 3222 222 4677999997531 12223322 1 122211000 234566788887554 5554442122
Q ss_pred CChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceecccccCCc
Q 039280 317 KSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYS 396 (487)
Q Consensus 317 ~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~p~~~~~ 396 (487)
....-.+-+++.++ +.+...+||.+|.-.. .+ .+.+.. .-.-+||+++.||+|...-. ..
T Consensus 133 ~~~~pf~~a~~~v~---~~~~diIIv~~H~g~t-------~E----k~~la~-~~dg~VD~VvGgHTHv~t~d-----~~ 192 (281)
T 1t71_A 133 KTTNPFKVLKELIL---KRDCDLHIVDFHAETT-------SE----KNAFCM-AFDGYVTTIFGTHTHVPSAD-----LR 192 (281)
T ss_dssp CBCCHHHHHHHHHT---TCCCSEEEEEEECSCH-------HH----HHHHHH-HHTTTSSEEEEESSSSCCTT-----CE
T ss_pred cccCHHHHHHHHHh---hcCCCEEEEEeCCCch-------HH----HHHHHH-hCCCCeEEEEeCCCCcCCCc-----eE
Confidence 12233455666666 2456789999994210 11 122222 12336999999999975433 12
Q ss_pred cCCCCcEEEE
Q 039280 397 LDPCGPVYIL 406 (487)
Q Consensus 397 ~~~~g~vyIv 406 (487)
.-+.|+.||+
T Consensus 193 il~~gt~~i~ 202 (281)
T 1t71_A 193 ITPKGSAYIT 202 (281)
T ss_dssp ECTTSCEEES
T ss_pred EecCCcEEEe
Confidence 2347888887
|
| >3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A* | Back alignment and structure |
|---|
Probab=98.34 E-value=2.1e-06 Score=92.18 Aligned_cols=176 Identities=16% Similarity=0.141 Sum_probs=91.8
Q ss_pred CCcEEEEEecCCCCCC-------------------h---HHHHHHHHHcCCC-EEEEcCccccccccccCCCcccccccc
Q 039280 171 YPNRIAVVGDLGLTYN-------------------T---TTTVAHLMSNHPD-LLLLIGDLSYADLYLTNGTKSSCYLCQ 227 (487)
Q Consensus 171 ~~~~f~v~gD~~~~~~-------------------~---~~~l~~l~~~~pd-fvl~~GDl~y~d~~~~~g~~~~~~~~~ 227 (487)
..++|++++|+|.... . ...++++.+..++ ++|.+||++....+.
T Consensus 11 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~------------ 78 (579)
T 3ztv_A 11 VELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYF------------ 78 (579)
T ss_dssp EEEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHH------------
T ss_pred eEEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceee------------
Confidence 4689999999996521 1 2245556556676 889999999532110
Q ss_pred CCCCcccchhhHHHHHHHHhhhccccCCCEEEecCCcccccCccchhhHHhhcccCCCCCC------CCC----CCcceE
Q 039280 228 SIESPIQETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEE------SGS----SSSLYY 297 (487)
Q Consensus 228 ~~~~~~~~~y~~~w~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~------~~~----~~~~yY 297 (487)
..+ ......+.|..+ ..- ++++||||+.. +...+..+.....+|.-. .+. .-..|.
T Consensus 79 -------~~~--~g~~~~~~ln~l--g~D-~~tlGNHEfd~--G~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~ 144 (579)
T 3ztv_A 79 -------TLF--GGSADAAVMNAG--NFH-YFTLGNHEFDA--GNEGLLKLLEPLKIPVLSANVIPDKSSILYNKWKPYD 144 (579)
T ss_dssp -------HTT--TTHHHHHHHHHH--TCS-EEECCSGGGTT--HHHHHHHHHTTCCSCEECSSEEECTTSTTTTSCBSEE
T ss_pred -------eec--CCHHHHHHHHhc--CcC-eeecccccccc--CHHHHHHHHHhcCCCeeeeeEeccCCcccccccCCeE
Confidence 000 112223334333 222 57899999853 223344444444433210 000 112456
Q ss_pred EEEeCCE--EEEEEcC-c-----ccCCC---ChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHH
Q 039280 298 SFNAGGI--HFVMLSA-Y-----IDYDK---SSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEM 366 (487)
Q Consensus 298 sf~~g~v--~fi~Ldt-~-----~~~~~---~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l 366 (487)
-++.+++ -||.+.+ . ..... -.+..+-+++.+++........+|+++|.+... . .
T Consensus 145 i~~~~G~kIgviG~t~~~~~~~~~~p~~~~~f~d~~~~~~~~v~~lk~~g~d~iI~l~H~G~~~--------d----~-- 210 (579)
T 3ztv_A 145 IFTVDGEKIAIIGLDTVNKTVNSSSPGKDVKFYDEIATAQIMANALKQQGINKIILLSHAGSEK--------N----I-- 210 (579)
T ss_dssp EEEETTEEEEEEEEECSHHHHHHSCCCTTEEECCHHHHHHHHHHHHHTTTCCCEEEEEETCHHH--------H----H--
T ss_pred EEEECCEEEEEEEEEcCCccccccCCCCCceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh--------h----H--
Confidence 6788874 5566643 1 00000 012233344443333223355699999977532 0 1
Q ss_pred HHHHHH-cCCcEEEeCccccce
Q 039280 367 EDLLYY-YGVDIVFNGHVHAYE 387 (487)
Q Consensus 367 ~~l~~~-~~VdlvlsGH~H~ye 387 (487)
.+..+ -+||++|+||+|...
T Consensus 211 -~la~~~~giDlIlgGHtH~~~ 231 (579)
T 3ztv_A 211 -EIAQKVNDIDVIVTGDSHYLY 231 (579)
T ss_dssp -HHHHHCSSCCEEEECSSCCEE
T ss_pred -HHHHhCCCCCEEEeCCCCccc
Confidence 12222 379999999999876
|
| >4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A* | Back alignment and structure |
|---|
Probab=98.34 E-value=7.8e-07 Score=94.88 Aligned_cols=176 Identities=18% Similarity=0.185 Sum_probs=91.2
Q ss_pred CCcEEEEEecCCCCCC------------------h---HHHHHHHHHcCC-CEEEEcCccccccccccCCCccccccccC
Q 039280 171 YPNRIAVVGDLGLTYN------------------T---TTTVAHLMSNHP-DLLLLIGDLSYADLYLTNGTKSSCYLCQS 228 (487)
Q Consensus 171 ~~~~f~v~gD~~~~~~------------------~---~~~l~~l~~~~p-dfvl~~GDl~y~d~~~~~g~~~~~~~~~~ 228 (487)
..++|++++|+|.... . ...++++.+..+ +++|.+||++....+
T Consensus 24 ~~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~-------------- 89 (546)
T 4h2g_A 24 WELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIW-------------- 89 (546)
T ss_dssp EEEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHH--------------
T ss_pred eEEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchh--------------
Confidence 4689999999996421 1 234556666666 599999999953110
Q ss_pred CCCcccchhhHHHHHHHHhhhccccCCCEEEecCCcccccCccchhhH-HhhcccCCCCCCCC---C---------CCcc
Q 039280 229 IESPIQETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIERQAENQTFA-AYSSRFAFPSEESG---S---------SSSL 295 (487)
Q Consensus 229 ~~~~~~~~y~~~w~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~-~y~~~f~~P~~~~~---~---------~~~~ 295 (487)
... .......+.|..+ ... ++++||||+... ...+. .+.....+|.-... . ....
T Consensus 90 -----~~~--~~g~~~~~~ln~l--g~d-~~~~GNHEfd~g--~~~l~~~~~~~~~~~~l~aNv~~~~~~~p~~~~~~~~ 157 (546)
T 4h2g_A 90 -----FTV--YKGAEVAHFMNAL--RYD-AMALGNHEFDNG--VEGLIEPLLKEAKFPILSANIKAKGPLASQISGLYLP 157 (546)
T ss_dssp -----HHH--HTTHHHHHHHHHH--TCS-EEECCGGGGTTH--HHHHHTTTTTTCSSCEECSSEEECHHHHHHHBTTBBS
T ss_pred -----hhh--hCChHHHHHHHhc--CCc-EEeccCcccccC--HHHHHHHHHhhcCCCEEEEEeecCCCCCccccccCCC
Confidence 000 0112233344443 233 578999998532 12233 33333333321100 0 1234
Q ss_pred eEEEEeCCEEE--EEEcCcc--cC-CC-----ChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHH
Q 039280 296 YYSFNAGGIHF--VMLSAYI--DY-DK-----SSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVE 365 (487)
Q Consensus 296 yYsf~~g~v~f--i~Ldt~~--~~-~~-----~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~ 365 (487)
|.-++.+++++ |.+.+.. .+ .. -.+..+.+++.+++........+|+++|.+.... .
T Consensus 158 ~~i~~~~G~kIgiiG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~~g~D~iI~l~H~g~~~d------------~- 224 (546)
T 4h2g_A 158 YKVLPVGDEVVGIVGYTSKETPFLSNPGTNLVFEDEITALQPEVDKLKTLNVNKIIALGHSGFEMD------------K- 224 (546)
T ss_dssp EEEEEETTEEEEEEEEECTTHHHHSCCCSSEEECCHHHHHHHHHHHHHHTTCCCEEEEEESCHHHH------------H-
T ss_pred eEEEEECCEEEEEEEecccccccccCCCCCcEEccHHHHHHHHHHHHHhcCCCEEEEEeccCccch------------H-
Confidence 66678888554 5554321 00 00 0122333444333322133556999999875321 1
Q ss_pred HHHHHHH-cCCcEEEeCccccce
Q 039280 366 MEDLLYY-YGVDIVFNGHVHAYE 387 (487)
Q Consensus 366 l~~l~~~-~~VdlvlsGH~H~ye 387 (487)
.+.++ .+||++|+||+|...
T Consensus 225 --~la~~~~giDlIlgGHtH~~~ 245 (546)
T 4h2g_A 225 --LIAQKVRGVDVVVGGHSNTFL 245 (546)
T ss_dssp --HHHHHSTTCCEEECCSSCCCC
T ss_pred --HHHHhCCCCcEEEeCCcCccc
Confidence 12222 379999999999864
|
| >3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A* | Back alignment and structure |
|---|
Probab=98.29 E-value=4e-06 Score=88.60 Aligned_cols=188 Identities=18% Similarity=0.145 Sum_probs=91.5
Q ss_pred CcEEEEEecCCCCCC----------------h---HHHHHHHHHcCCCEEEE-cCccccccccccCCCccccccccCCCC
Q 039280 172 PNRIAVVGDLGLTYN----------------T---TTTVAHLMSNHPDLLLL-IGDLSYADLYLTNGTKSSCYLCQSIES 231 (487)
Q Consensus 172 ~~~f~v~gD~~~~~~----------------~---~~~l~~l~~~~pdfvl~-~GDl~y~d~~~~~g~~~~~~~~~~~~~ 231 (487)
.++|+.++|+|.... . ...++++.+.+++.+++ +||++....+
T Consensus 6 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g~~~----------------- 68 (509)
T 3ive_A 6 DVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGPYI----------------- 68 (509)
T ss_dssp EEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHH-----------------
T ss_pred EEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCCchh-----------------
Confidence 589999999996421 1 23456666678887766 9999842110
Q ss_pred cccchhhHHHHHHHHhhhccccCCCEEEecCCcccccCccchhhHHhhcccCCCCCC-------CC-CC-CcceEEEEeC
Q 039280 232 PIQETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEE-------SG-SS-SSLYYSFNAG 302 (487)
Q Consensus 232 ~~~~~y~~~w~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~-------~~-~~-~~~yYsf~~g 302 (487)
... .......+.|..+ . +-++++||||+... ...+..+.....+|.-. .+ .. ...|.-++.+
T Consensus 69 --~~~--~~g~~~~~~ln~l--g-~D~~tlGNHEfd~G--~~~l~~~l~~~~~p~l~aNv~~~~~~~p~~~~py~i~e~~ 139 (509)
T 3ive_A 69 --SSL--TKGKAIIDIMNTM--P-FDAVTIGNHEFDHG--WDNTLLQLSQAKFPIVQGNIFYQNSSKSFWDKPYTIIEKD 139 (509)
T ss_dssp --HHT--TTTHHHHHHHTTS--C-CSEECCCGGGGTTC--HHHHHHHHTTCSSCBCCCSEEETTSCCBSSSCSEEEEEET
T ss_pred --hhh--cCChHHHHHHHhc--C-CcEEeecccccccC--HHHHHHHHhhCCCCEEEEEEEECCCCCccCcCCeEEEEEC
Confidence 000 0112233344433 2 33677899998532 23333443333333210 00 01 2345667888
Q ss_pred CE--EEEEEcCcc-----cC----C--CChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHH-HHHHHHH
Q 039280 303 GI--HFVMLSAYI-----DY----D--KSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVEC-MRVEMED 368 (487)
Q Consensus 303 ~v--~fi~Ldt~~-----~~----~--~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~-~r~~l~~ 368 (487)
++ -||.+-+.. .. . ...+..+.+++.+++.... ...+|+++|.+.............. ....-..
T Consensus 140 G~kIgiiG~t~~~~~~~~~~~~~~~g~~~~d~~~~~~~~v~~Lk~~-~D~iIvl~H~G~~~~~~~~~~~~~~~~~~~d~~ 218 (509)
T 3ive_A 140 GVKIGVIGLHGVFAFNDTVSAATRVGIEARDEIKWLQRYIDELKGK-VDLTVALIHEGVPARQSSMGGTDVRRALDKDIQ 218 (509)
T ss_dssp TEEEEEEEEECHHHHHHHSCGGGCTTEEECCHHHHHHHHHHHHTTT-CSEEEEEEECSSCCCCCCC---CCCCCCHHHHH
T ss_pred CEEEEEEecccCcccccccccccCCCCEEcCHHHHHHHHHHHHHhc-CCEEEEEeccCcCCccccccccccccccchHHH
Confidence 85 455663310 00 0 0122333444444333223 5679999998753221110000000 0000012
Q ss_pred HHHH-cCCcEEEeCccccc
Q 039280 369 LLYY-YGVDIVFNGHVHAY 386 (487)
Q Consensus 369 l~~~-~~VdlvlsGH~H~y 386 (487)
+.++ .+||++|+||+|..
T Consensus 219 la~~~~giDlIlgGHtH~~ 237 (509)
T 3ive_A 219 TASQVKGLDILITGHAHVG 237 (509)
T ss_dssp HHHHCSSCCEEEEESSCCC
T ss_pred HHhcCCCCcEEEeCCcCcc
Confidence 3333 37999999999964
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=98.29 E-value=4.8e-07 Score=84.84 Aligned_cols=39 Identities=36% Similarity=0.445 Sum_probs=26.6
Q ss_pred CcEEEEEecCCCCCCh-HHHHHHHHH-cCCCEEEEcCcccc
Q 039280 172 PNRIAVVGDLGLTYNT-TTTVAHLMS-NHPDLLLLIGDLSY 210 (487)
Q Consensus 172 ~~~f~v~gD~~~~~~~-~~~l~~l~~-~~pdfvl~~GDl~y 210 (487)
.+|++++||+|..... .+.++.+.. .++|.++++||++.
T Consensus 12 ~~~i~visDiHg~~~~l~~~l~~~~~~~~~d~~i~~GD~~~ 52 (221)
T 1g5b_A 12 YRNIWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVD 52 (221)
T ss_dssp CSCEEEECCCTTCHHHHHHHHHHHTCCTTTCEEEECSCCSS
T ss_pred CceEEEEEcCCCCHHHHHHHHHHccCCCCCCEEEEeCCccC
Confidence 4789999999965321 223333322 26899999999994
|
| >3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.20 E-value=5.6e-05 Score=80.51 Aligned_cols=194 Identities=17% Similarity=0.178 Sum_probs=94.3
Q ss_pred EEcCCCCCCCCCCcEEEEEecCCCCCC--------------hHHHHHHHH----HcCCC-EEEEcCccccccccccCCCc
Q 039280 160 FRTMPVSGPSDYPNRIAVVGDLGLTYN--------------TTTTVAHLM----SNHPD-LLLLIGDLSYADLYLTNGTK 220 (487)
Q Consensus 160 F~T~p~~~~~~~~~~f~v~gD~~~~~~--------------~~~~l~~l~----~~~pd-fvl~~GDl~y~d~~~~~g~~ 220 (487)
|-+.|........++|+.++|+|.... ..+.+..+. +.+++ ++|.+||++....+.+
T Consensus 3 ~~s~p~~~~~~~~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~---- 78 (557)
T 3c9f_A 3 LASFPHRNLTWNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSD---- 78 (557)
T ss_dssp --CCCBCCCCCCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHH----
T ss_pred cccCCCCCCCceEEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchh----
Confidence 334454433445799999999998531 122233333 25688 5799999994321100
Q ss_pred cccccccCCCCcccchhhHHHHHHHHhhhccccCCCEEEecCCcccccCccc-hhhHHhhcccCCCC---C-----CCCC
Q 039280 221 SSCYLCQSIESPIQETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIERQAEN-QTFAAYSSRFAFPS---E-----ESGS 291 (487)
Q Consensus 221 ~~~~~~~~~~~~~~~~y~~~w~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~-~~~~~y~~~f~~P~---~-----~~~~ 291 (487)
.+........+.|..+ ..- ++++||||+...... ..+........+|. | ..+.
T Consensus 79 ---------------~~~~~g~~~~~~ln~l--g~D-a~tlGNHEfD~G~~~l~~~~~~l~~a~fp~L~ANv~~~~~~g~ 140 (557)
T 3c9f_A 79 ---------------ITSPNGLKSTPIFIKQ--DYD-LLTIGNHELYLWENSKQEYETVVNHFQDKYVCSNVDIRLDNGL 140 (557)
T ss_dssp ---------------SSSSTTTTTHHHHTTS--CCS-EECCCGGGSSSHHHHHHHHHHHHHHTTTTBBCSSEEEECTTSC
T ss_pred ---------------hcccCCHHHHHHHHhc--CCC-EEeecchhcccchHHHHHHHHHHHhCCCCEEEeecccccccCC
Confidence 0000011122333333 223 568899999642110 12222223333332 1 0010
Q ss_pred ---CCcceEEEEe--CCEEE--EEEcCcccCC------CChHH--H-HHHHHHhcccCCCCCCeEEEEcCCCccccCCCC
Q 039280 292 ---SSSLYYSFNA--GGIHF--VMLSAYIDYD------KSSDQ--Y-KWLESDLGDVDREVTPWLIAAWHPPWYSTYSAH 355 (487)
Q Consensus 292 ---~~~~yYsf~~--g~v~f--i~Ldt~~~~~------~~~~Q--~-~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~ 355 (487)
....|.-++. +++++ |.+.+..... ....+ . +|+++.+++ +...+|+++|.+.....
T Consensus 141 ~~~~~~py~I~e~~~~G~kIgiiGlt~~~~~~~~~~~~~d~~e~i~~~~v~~l~~~----~~D~IIvL~H~G~~~~~--- 213 (557)
T 3c9f_A 141 FVPLGLKYKYFTTPIRGIRVMAFGFLFDFKRFNSGTRVTPMAETIHEPWFQEALKH----EVDLIIIVGHTPISHNW--- 213 (557)
T ss_dssp EEESSBSCEEEECTTTCCEEEEEECCCCCCCCCTTEEECCHHHHTTSHHHHHHTTS----CCSEEEEECSSCCCTTT---
T ss_pred ccccCCCeEEEEEccCCEEEEEEEeecCCCCCCCCcEECCHHHHHHHHHHHHHHhc----CCCEEEEecccCccccC---
Confidence 1234556787 77554 5554431100 01222 1 466665532 45679999998863100
Q ss_pred cchhHHHHHHHHHHHHH--cCCcE-EEeCccccce
Q 039280 356 YREVECMRVEMEDLLYY--YGVDI-VFNGHVHAYE 387 (487)
Q Consensus 356 ~~~~~~~r~~l~~l~~~--~~Vdl-vlsGH~H~ye 387 (487)
.+. ......+.+ .+||+ +|+||.|...
T Consensus 214 -d~~----~~~~~~lA~~~~giDilIlgGHtH~~~ 243 (557)
T 3c9f_A 214 -GEF----YQVHQYLRQFFPDTIIQYFGGHSHIRD 243 (557)
T ss_dssp -CHH----HHHHHHHHHHCTTSEEEEEECSSCCEE
T ss_pred -ccc----cHHHHHHHHhCCCCCEEEECCCCCCCC
Confidence 111 122222223 48995 9999999873
|
| >1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=98.17 E-value=4.1e-05 Score=73.03 Aligned_cols=187 Identities=15% Similarity=0.142 Sum_probs=98.6
Q ss_pred cEEEEEecCCCCCCh---HHHHHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhhh
Q 039280 173 NRIAVVGDLGLTYNT---TTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYMQ 249 (487)
Q Consensus 173 ~~f~v~gD~~~~~~~---~~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~~ 249 (487)
+|++++||+=..... ...+.++.+.. |++|..|+.+.. |.. +. + ...+.|.
T Consensus 1 m~ilf~GDv~g~~G~~~~~~~l~~lr~~~-d~vi~nge~~~~------G~g------------~~---~----~~~~~l~ 54 (255)
T 1t70_A 1 MRVLFIGDVFGQPGRRVLQNHLPTIRPQF-DFVIVNMENSAG------GFG------------MH---R----DAARGAL 54 (255)
T ss_dssp CEEEEECCBBHHHHHHHHHHHHHHHGGGC-SEEEEECTBTTT------TSS------------CC---H----HHHHHHH
T ss_pred CEEEEEeccCChHHHHHHHHHHHHHHhhC-CEEEECCCCccC------CcC------------CC---H----HHHHHHH
Confidence 589999998432221 23345555556 999988888742 221 00 1 1122233
Q ss_pred ccccCCCEEEecCCcccccCccchhhHHhhcccC----CCCCCC--CCCCcceEEEEeCCEEE--EEEcCcccCCCChHH
Q 039280 250 PLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFA----FPSEES--GSSSSLYYSFNAGGIHF--VMLSAYIDYDKSSDQ 321 (487)
Q Consensus 250 ~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~----~P~~~~--~~~~~~yYsf~~g~v~f--i~Ldt~~~~~~~~~Q 321 (487)
.+ .+- .++.||||+... ....+.+... .|.|-+ +..+..|.-++.+++++ |.|-+......-..-
T Consensus 55 ~~--G~D-a~TlGNHefD~~----~l~~~l~~~~~~~~~~aN~~~~~~pg~g~~I~~~~G~kIgVigl~g~~~~~~~~~p 127 (255)
T 1t70_A 55 EA--GAG-CLTLGNHAWHHK----DIYPMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNP 127 (255)
T ss_dssp HH--TCS-EEECCTTTTSST----THHHHHHTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCH
T ss_pred hC--CCC-EEEeccccccCc----hHHHHHhhCCCcEEEEeccCCCCCCCCCeEEEEECCEEEEEEEeecCcCcccccCH
Confidence 22 233 456699999742 2233322221 233321 12245666788887554 555444221122333
Q ss_pred HHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceecccccCCccCCCC
Q 039280 322 YKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCG 401 (487)
Q Consensus 322 ~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~p~~~~~~~~~g 401 (487)
.+-+++.+++. +...+||.+|.-. ..+ .+.+.. .-.-+||+++.||+|...-. ...-|.|
T Consensus 128 ~~~~~~~v~~l---~~d~IIv~~H~e~-------t~E----k~~la~-~~dg~vd~VvGgHTHv~~~d-----~~il~~g 187 (255)
T 1t70_A 128 FRTMDALLERD---DLGTVFVDFHAEA-------TSE----KEAMGW-HLAGRVAAVIGTHTHVPTAD-----TRILKGG 187 (255)
T ss_dssp HHHHHHHTTCS---SCCEEEEEEECSC-------HHH----HHHHHH-HHTTSSSEEEEESSCSCBSC-----CEEETTT
T ss_pred HHHHHHHHHHh---CCCEEEEEeCCCC-------hHH----HHHHHH-hCCCCeEEEEeCCCCcCCCc-----eEEcCCC
Confidence 44566666665 4567999999421 011 122222 22345999999999975433 1122478
Q ss_pred cEEEE-eCCccc
Q 039280 402 PVYIL-VGDGGN 412 (487)
Q Consensus 402 ~vyIv-~G~gG~ 412 (487)
+.||+ .|..|.
T Consensus 188 t~~i~d~G~~G~ 199 (255)
T 1t70_A 188 TAYQTDAGFTGP 199 (255)
T ss_dssp EEEESCCCCBEE
T ss_pred eEEEEcCccccc
Confidence 88877 344444
|
| >2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A | Back alignment and structure |
|---|
Probab=98.15 E-value=3.7e-05 Score=73.11 Aligned_cols=187 Identities=18% Similarity=0.252 Sum_probs=97.7
Q ss_pred cEEEEEecCCCCCCh---HHHHHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhhh
Q 039280 173 NRIAVVGDLGLTYNT---TTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYMQ 249 (487)
Q Consensus 173 ~~f~v~gD~~~~~~~---~~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~~ 249 (487)
+||+++||+=..... ...+.++.+.. |++|..|..+.. |.. +. ....+.|.
T Consensus 1 m~ilfiGDi~g~~G~~~v~~~l~~lr~~~-d~vi~ngen~~~------G~g------------~~-------~~~~~~l~ 54 (252)
T 2z06_A 1 MRVLFIGDVMAEPGLRAVGLHLPDIRDRY-DLVIANGENAAR------GKG------------LD-------RRSYRLLR 54 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHGGGC-SEEEEECTTTTT------TSS------------CC-------HHHHHHHH
T ss_pred CEEEEEEecCCcccHHHHHHHHHHHHhhC-CEEEEeCCCccC------CCC------------cC-------HHHHHHHH
Confidence 589999998433222 23455555556 998887776642 221 10 11122233
Q ss_pred ccccCCCEEEecCCcccccCccchhhHHhhccc--CCCCCCC-CCCCcceEEEEeCCEEEEEEc--CcccCCCChHHHHH
Q 039280 250 PLVSNVPTMVIEGEHEIERQAENQTFAAYSSRF--AFPSEES-GSSSSLYYSFNAGGIHFVMLS--AYIDYDKSSDQYKW 324 (487)
Q Consensus 250 ~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f--~~P~~~~-~~~~~~yYsf~~g~v~fi~Ld--t~~~~~~~~~Q~~W 324 (487)
.+ .+-. ++.||||++.. ....|.+.. -.|.|-+ +.....|.-++.++.++-+++ +.........-.+-
T Consensus 55 ~~--G~D~-~T~GNHefD~~----~l~~~l~~~~~vrpaN~~~~~pg~~~~i~~~~G~kIgVi~l~g~~~~~~~~~pf~~ 127 (252)
T 2z06_A 55 EA--GVDL-VSLGNHAWDHK----EVYALLESEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRA 127 (252)
T ss_dssp HH--TCCE-EECCTTTTSCT----THHHHHHHSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHH
T ss_pred hC--CCCE-EEeccEeeECc----hHHHHhccCCceEeecCCCCCCCCCeEEEEECCEEEEEEEcccccCccccCCHHHH
Confidence 22 3334 47799999753 233333222 1222211 112356777888886665554 33211112222333
Q ss_pred HHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceecccccCCccCCCCcEE
Q 039280 325 LESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPVY 404 (487)
Q Consensus 325 L~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~p~~~~~~~~~g~vy 404 (487)
+++.+++.. ...+||.+|.-.- .+ ++.+.. +-.-+||+++.||+|..... ..+-+.|+.|
T Consensus 128 ~~~~v~~lk---~d~IIv~~H~g~t-------se----k~~la~-~~dg~Vd~VvGgHTHv~t~d-----~~il~~gt~~ 187 (252)
T 2z06_A 128 LDRLLEEEK---ADYVLVEVHAEAT-------SE----KMALAH-YLDGRASAVLGTHTHVPTLD-----ATRLPKGTLY 187 (252)
T ss_dssp HHHHHHHCC---CSEEEEEEECSCH-------HH----HHHHHH-HHBTTBSEEEEESSCSCBSC-----CEECTTSCEE
T ss_pred HHHHHHHhC---CCEEEEEeCCCcH-------HH----HHHHHH-hCCCCeEEEEcCCCCcCCCc-----cEEcCCCcEe
Confidence 555555432 5679999995321 11 122222 22346999999999974332 2334578899
Q ss_pred EE-eCCccc
Q 039280 405 IL-VGDGGN 412 (487)
Q Consensus 405 Iv-~G~gG~ 412 (487)
|+ .|..|.
T Consensus 188 itd~G~~G~ 196 (252)
T 2z06_A 188 QTDVGMTGT 196 (252)
T ss_dssp ESCCCCBEE
T ss_pred ecCCccccc
Confidence 87 344444
|
| >3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=97.76 E-value=0.00018 Score=71.83 Aligned_cols=40 Identities=20% Similarity=0.202 Sum_probs=27.7
Q ss_pred CCcEEEEEecCCCCCC--------------h---HHHHHHHHHcCCC-EEEEcCcccc
Q 039280 171 YPNRIAVVGDLGLTYN--------------T---TTTVAHLMSNHPD-LLLLIGDLSY 210 (487)
Q Consensus 171 ~~~~f~v~gD~~~~~~--------------~---~~~l~~l~~~~pd-fvl~~GDl~y 210 (487)
..++|+..+|+|.... . ...++++.+..++ ++|.+||++.
T Consensus 10 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~~~llld~GD~~q 67 (341)
T 3gve_A 10 VHLSILATTDIHANMMDYDYYSDKETADFGLARTAQLIQKHREQNPNTLLVDNGDLIQ 67 (341)
T ss_dssp EEEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHHCSSEEEEECSCCSC
T ss_pred eEEEEEEEeccCCCccCccccCCCccccCCHHHHHHHHHHHHhcCCCEEEEecCccCC
Confidence 3589999999997531 1 2345566555665 6678999994
|
| >3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00098 Score=66.39 Aligned_cols=39 Identities=18% Similarity=0.152 Sum_probs=27.9
Q ss_pred CcEEEEEecCCCCCC--------------h---HHHHHHHHHcCCC-EEEEcCcccc
Q 039280 172 PNRIAVVGDLGLTYN--------------T---TTTVAHLMSNHPD-LLLLIGDLSY 210 (487)
Q Consensus 172 ~~~f~v~gD~~~~~~--------------~---~~~l~~l~~~~pd-fvl~~GDl~y 210 (487)
.++|+..+|+|.... . ...++++.+..++ ++|..||++.
T Consensus 8 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~n~llld~GD~~q 64 (339)
T 3jyf_A 8 DLRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEVKNSVLVDNGDVIQ 64 (339)
T ss_dssp EEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTCSCEEEEECSCCSS
T ss_pred eEEEEEEeeCCCCcccccccCCCccccCCHHHHHHHHHHHHhhCCCEEEEECCCCCC
Confidence 589999999997531 1 2345666666666 7789999994
|
| >4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.57 E-value=0.0014 Score=69.48 Aligned_cols=172 Identities=18% Similarity=0.200 Sum_probs=87.2
Q ss_pred CcEEEEEecCCCCCC------------------h---HHHHHHHHHcCCC-EEEEcCccccccccccCCCccccccccCC
Q 039280 172 PNRIAVVGDLGLTYN------------------T---TTTVAHLMSNHPD-LLLLIGDLSYADLYLTNGTKSSCYLCQSI 229 (487)
Q Consensus 172 ~~~f~v~gD~~~~~~------------------~---~~~l~~l~~~~pd-fvl~~GDl~y~d~~~~~g~~~~~~~~~~~ 229 (487)
.++|+...|+|.... . ...++++.+.+++ ++|.+||++....+
T Consensus 3 ~LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~n~llldaGD~~qGs~~--------------- 67 (530)
T 4h1s_A 3 ELTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIW--------------- 67 (530)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHH---------------
T ss_pred EEEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCcCeEEEEeCCcccchHH---------------
Confidence 478999999996421 1 1235555556666 67789999953211
Q ss_pred CCcccchhhHHHHHHHHhhhccccCCCEEEecCCcccccCccchhhH-HhhcccCCCCCCC------------CCCCcce
Q 039280 230 ESPIQETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIERQAENQTFA-AYSSRFAFPSEES------------GSSSSLY 296 (487)
Q Consensus 230 ~~~~~~~y~~~w~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~-~y~~~f~~P~~~~------------~~~~~~y 296 (487)
...+ +.....+.|..+. .=.+++||||+.... ..+. .+.....+|-=.. ...-..|
T Consensus 68 ----~~~~--~g~~~i~~mN~lg---yDa~~lGNHEFd~G~--~~l~~~~~~~a~fp~L~aNv~~~~~~~~~~~~~~~py 136 (530)
T 4h1s_A 68 ----FTVY--KGAEVAHFMNALR---YDAMALGNHEFDNGV--EGLIEPLLKEAKFPILSANIKAKGPLASQISGLYLPY 136 (530)
T ss_dssp ----HHHH--TTHHHHHHHHHTT---CCEEECCGGGGTTTT--HHHHTTTTTTCSSCEECTTEEECTTHHHHHTTTSBSE
T ss_pred ----HHHh--CChHHHHHHhccC---CCEEEEchhhhccCH--HHHHHHHHhhCCCCEEEEeeeccCCcccccCCcccce
Confidence 0001 1122223333332 126789999996321 2221 1222223332110 0112346
Q ss_pred EEEEeCCEEE--EEEcCcc-----c------CCCChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHH
Q 039280 297 YSFNAGGIHF--VMLSAYI-----D------YDKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMR 363 (487)
Q Consensus 297 Ysf~~g~v~f--i~Ldt~~-----~------~~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r 363 (487)
.-++.+++++ |.+-+.. . +...-+..+...++|++ ....-+|+++|..... ..
T Consensus 137 ~I~~~~g~kIgviGltt~~~~~~~~~~~~~~f~d~v~~~~~~v~~Lr~---~g~D~II~LsH~G~~~--------d~--- 202 (530)
T 4h1s_A 137 KVLPVGDEVVGIVGYTSKETPFLSNPGTNLVFEDEITALQPEVDKLKT---LNVNKIIALGHSGFEM--------DK--- 202 (530)
T ss_dssp EEEEETTEEEEEEEEECTTHHHHSCCCTTEEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHH--------HH---
T ss_pred EEEEeccEEEeeccccccceeeeccCCCCcccCcHHHHHHHHHhhhhh---cCCCEEEEeccCCchH--------HH---
Confidence 6778888654 5554321 0 01112233334444544 2345599999965321 11
Q ss_pred HHHHHHHHHc-CCcEEEeCccccce
Q 039280 364 VEMEDLLYYY-GVDIVFNGHVHAYE 387 (487)
Q Consensus 364 ~~l~~l~~~~-~VdlvlsGH~H~ye 387 (487)
.+.++. +||++|.||+|..-
T Consensus 203 ----~la~~v~giD~IlgGHsH~~~ 223 (530)
T 4h1s_A 203 ----LIAQKVRGVDVVVGGHSNTFL 223 (530)
T ss_dssp ----HHHHHSTTCCEEECCSSCCCB
T ss_pred ----HHHhcCCCCCeeccCCcccee
Confidence 223333 79999999999754
|
| >1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0097 Score=48.08 Aligned_cols=95 Identities=19% Similarity=0.209 Sum_probs=55.5
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
+..|..+++.- ...+++.|+|.-....-| ....=.|+|............ .. .
T Consensus 11 P~~P~~l~~~~-~~~~sv~l~W~~p~~~~g--------~i~~Y~v~~~~~~~~~~~~~~-----~~-------------~ 63 (111)
T 1x5l_A 11 PSQVVVIRQER-AGQTSVSLLWQEPEQPNG--------IILEYEIKYYEKDKEMQSYST-----LK-------------A 63 (111)
T ss_dssp CCCCCCEECSC-BCSSCEEEEECCCSCCCS--------CCCEEEEEEEESSSCCSSCEE-----EE-------------E
T ss_pred CCCCceEEEEE-cCCCEEEEEECCCCCCCC--------EEEEEEEEEEECCCCceeEEE-----ec-------------C
Confidence 34577776654 336899999976432101 012335666654321111000 00 0
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCCC---CCcCceEEEEcCCCCCC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPSI---SAMSSSHYFRTMPVSGP 168 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~~---~~~s~~~~F~T~p~~~~ 168 (487)
-...++|++|+|+|.|.+||...+. ..+|....|+|.+.++.
T Consensus 64 ~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~p 108 (111)
T 1x5l_A 64 VTTRATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETGKPSGP 108 (111)
T ss_dssp SSSEEEECSCCTTCEEEECEEEEETTEECCCCCCEEEECCCTTSC
T ss_pred CCCEEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEEcCCCCCC
Confidence 1236789999999999999954322 36888999999876543
|
| >2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.67 E-value=0.02 Score=46.42 Aligned_cols=96 Identities=23% Similarity=0.343 Sum_probs=59.0
Q ss_pred CCCceEEEeecc-CCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCC--ceEEEEEEEEeeeecCCCCCCccc
Q 039280 48 FQPEQIFVSLSA-RYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSL--TYQAEGYSLVYNQLYPPDGLQNYT 124 (487)
Q Consensus 48 ~~P~qi~l~~~~-~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~--~~~~~g~~~~~~~~~~~~g~~~~~ 124 (487)
..|..+.+.... .++++.|+|......-| ....=.|+|....+.. ..... ..
T Consensus 10 ~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g--------~i~~Y~v~~~~~~~~~~~~~~~~----~~------------- 64 (114)
T 2ede_A 10 SAPKDLTVITREGKPRAVIVSWQPPLEANG--------KITAYILFYTLDKNIPIDDWIME----TI------------- 64 (114)
T ss_dssp SCCEEEEEEECSSCSSCEEEEEECCSSCSS--------CCSEEEEEEESCSSSCTTTSEEE----EE-------------
T ss_pred CCCcceEEEEccCCCCEEEEEECCCCCCCC--------ceeEEEEEEEeCCCCCccceEEE----EE-------------
Confidence 568888887763 46899999987542111 0123456676543211 11100 00
Q ss_pred cCcEEEEEeCCCCCCCEEEEEEecCCC---CCcCceEEEEcCCCCCC
Q 039280 125 SGIIHHVLITGLQPNTLYEYECGDPSI---SAMSSSHYFRTMPVSGP 168 (487)
Q Consensus 125 ~~~~h~v~l~gL~P~T~Y~Y~vg~~~~---~~~s~~~~F~T~p~~~~ 168 (487)
......++|++|+|+|.|.+||...+. ..+|....|+|.+.+..
T Consensus 65 ~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp 111 (114)
T 2ede_A 65 SGDRLTHQIMDLNLDTMYYFRIQARNSKGVGPLSDPILFRTLKVSGP 111 (114)
T ss_dssp ETTCCEEEECSCCSSCEEEEEEEEECSSCBCCCCCCEEEECCCSSCC
T ss_pred CCCceEEEEcCCCCCCEEEEEEEEEeCCcCcCCcccEEEEecCCCCC
Confidence 012346789999999999999954332 35788899999876543
|
| >1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.59 E-value=0.037 Score=45.20 Aligned_cols=94 Identities=19% Similarity=0.187 Sum_probs=57.6
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCC-CCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCcccc
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGE-FQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTS 125 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~-~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~ 125 (487)
+..|..+++.... .+++.|+|.-.. ..-| ....=.|+|........... . . . .
T Consensus 18 P~~P~~l~~~~~~-~~sv~l~W~~p~~~~~g--------~i~~Y~v~~~~~~~~~~~~~-------~-~--~-------~ 71 (120)
T 1x5f_A 18 PSAPRDVVASLVS-TRFIKLTWRTPASDPHG--------DNLTYSVFYTKEGIARERVE-------N-T--S-------H 71 (120)
T ss_dssp CCCCEEEEEEEEC-SSCEEEEEECCSSCSSC--------CSSEEEEEEEETTCCCCEEE-------E-C--S-------S
T ss_pred CCCCCCcEEEecC-CCEEEEEECCCCCCCCC--------cEEEEEEEEEECCCCCceEE-------E-e--c-------c
Confidence 4568888876554 689999998754 2111 01234567766543222110 0 0 0 0
Q ss_pred CcEEEEEeCCCCCCCEEEEEEecCCCC---CcCceEEEEcCCCC
Q 039280 126 GIIHHVLITGLQPNTLYEYECGDPSIS---AMSSSHYFRTMPVS 166 (487)
Q Consensus 126 ~~~h~v~l~gL~P~T~Y~Y~vg~~~~~---~~s~~~~F~T~p~~ 166 (487)
.....++|++|+|+|.|.+||...+.. .+|+...|+|.+..
T Consensus 72 ~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 115 (120)
T 1x5f_A 72 PGEMQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQPES 115 (120)
T ss_dssp TTCSEEEECSCCTTCEEEEEEEEECSSCEEEECCCEEEECCCCC
T ss_pred CCccEEEeCCCCCCCEEEEEEEEECCCccCCCCCCEEEEeCCCC
Confidence 123467899999999999999653322 46788899997654
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0012 Score=63.34 Aligned_cols=38 Identities=24% Similarity=0.357 Sum_probs=25.1
Q ss_pred cEEEEEecCCCCCCh-HHHHHHHHHcCC-CEEEEcCcccc
Q 039280 173 NRIAVVGDLGLTYNT-TTTVAHLMSNHP-DLLLLIGDLSY 210 (487)
Q Consensus 173 ~~f~v~gD~~~~~~~-~~~l~~l~~~~p-dfvl~~GDl~y 210 (487)
.|++++||+|..... .+.++.+....+ |.+|++||++.
T Consensus 19 ~~i~visDiHg~~~~l~~~l~~~~~~~~~d~ii~~GD~vd 58 (262)
T 2qjc_A 19 GRVIIVGDIHGCRAQLEDLLRAVSFKQGSDTLVAVGDLVN 58 (262)
T ss_dssp SCEEEECCCTTCHHHHHHHHHHHTCCTTTSEEEECSCCSS
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHhccCCCCEEEEecCCCC
Confidence 489999999954211 122333323344 99999999994
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=96.48 E-value=0.0015 Score=63.23 Aligned_cols=38 Identities=24% Similarity=0.288 Sum_probs=24.5
Q ss_pred cEEEEEecCCCCCCh-HHHHHHHHH-cCCCEEEEcCcccc
Q 039280 173 NRIAVVGDLGLTYNT-TTTVAHLMS-NHPDLLLLIGDLSY 210 (487)
Q Consensus 173 ~~f~v~gD~~~~~~~-~~~l~~l~~-~~pdfvl~~GDl~y 210 (487)
||++++||+|..... .+.++.+.. .++|.++++||++.
T Consensus 1 M~i~vigDiHG~~~~l~~ll~~~~~~~~~d~~v~lGD~vd 40 (280)
T 2dfj_A 1 MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVA 40 (280)
T ss_dssp -CEEEECCCCSCHHHHHHHHHHTTCCTTTCEEEECSCCSS
T ss_pred CeEEEEecCCCCHHHHHHHHHHhCCCCCCCEEEEeCCcCC
Confidence 478999999975321 122222222 35799999999994
|
| >1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.42 E-value=0.017 Score=46.48 Aligned_cols=91 Identities=19% Similarity=0.116 Sum_probs=53.3
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
+..|..+++.-.. .+++.|+|.-... -|.. ...=.|+|....+..... +..
T Consensus 8 P~~P~~~~~~~~s-~~sv~l~W~~p~~-~g~~-------i~~Y~v~~~~~~~~~~~~-------~~~------------- 58 (106)
T 1x4x_A 8 PDQCKPPQVTCRS-ATCAQVNWEVPLS-NGTD-------VTEYRLEWGGVEGSMQIC-------YCG------------- 58 (106)
T ss_dssp CCCCCCCCCEEEE-TTEEEEECCCCSC-SSSC-------CCEEEEEEESSTTSCCEE-------EEE-------------
T ss_pred cCCCCCCEEEEcC-CCEEEEEEcCCCC-CCCc-------ceEEEEEEEcCCCceEEE-------EeC-------------
Confidence 3456666655433 5799999976432 1111 122356665543221111 100
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCCC---CCcCceEEEEcCCCC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPSI---SAMSSSHYFRTMPVS 166 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~~---~~~s~~~~F~T~p~~ 166 (487)
....++|++|+|+|.|.+||...+. ..+|+...++|.+..
T Consensus 59 ~~~~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~v~~~T~~~~ 101 (106)
T 1x4x_A 59 PGLSYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPPSS 101 (106)
T ss_dssp SCSEEEEESCCSSCEEEEEEEEECSSCCCCBCCCEEEECCCCC
T ss_pred CcceEEEcCCCCCCEEEEEEEEEcCCcCCCCcCCEEEECCCCC
Confidence 1125678999999999999964332 257888899998754
|
| >2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.38 E-value=0.065 Score=44.55 Aligned_cols=94 Identities=21% Similarity=0.204 Sum_probs=56.0
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCC--ceEEEEEEEEeeeecCCCCCCccc
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSL--TYQAEGYSLVYNQLYPPDGLQNYT 124 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~--~~~~~g~~~~~~~~~~~~g~~~~~ 124 (487)
...|..|++.--. .+++.|+|.-.....+..+.. ...=.|+|....... ...+.
T Consensus 19 p~~P~~l~~~~~s-~tsi~lsW~~p~~~~~~i~~~----~~~Y~v~y~~~~~~~~~~~~~~------------------- 74 (123)
T 2edd_A 19 MLPPVGVQAVALT-HDAVRVSWADNSVPKNQKTSE----VRLYTVRWRTSFSASAKYKSED------------------- 74 (123)
T ss_dssp SCCCEEEEEEEEE-TTEEEEEEECSSSCSSCCCSC----CCCEEEEEEETTCTTCCCCCEE-------------------
T ss_pred CCCCcceEEEEcC-CCeEEEEecCCCCCcccccCc----CceEEEEEEECCCCCccEEEEe-------------------
Confidence 4568888876544 689999998543110000000 013356676542110 00000
Q ss_pred cCcEEEEEeCCCCCCCEEEEEEecCC---CCCcCceEEEEcCCC
Q 039280 125 SGIIHHVLITGLQPNTLYEYECGDPS---ISAMSSSHYFRTMPV 165 (487)
Q Consensus 125 ~~~~h~v~l~gL~P~T~Y~Y~vg~~~---~~~~s~~~~F~T~p~ 165 (487)
.....++|+||+|+|.|.++|.... ...||....|+|.+.
T Consensus 75 -~~~~~~~v~gL~P~T~Y~f~V~A~n~~g~g~~S~~v~~~T~~~ 117 (123)
T 2edd_A 75 -TTSLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEA 117 (123)
T ss_dssp -ESSSEEEEESCCTTCEEEEEEEECCSSSCCCCCCCEEEECCCS
T ss_pred -CCceEEEecCCCCCCEEEEEEEEeCCCcccCCCCCEEEEccCC
Confidence 0123678999999999999995432 236888999999876
|
| >3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.36 E-value=0.013 Score=60.41 Aligned_cols=188 Identities=20% Similarity=0.266 Sum_probs=96.4
Q ss_pred CcEEEEEecCCCCCCh-H--HH----HHHHH-----------HcCCCEEEEcCccccccccccCCCccccccccCCCCcc
Q 039280 172 PNRIAVVGDLGLTYNT-T--TT----VAHLM-----------SNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPI 233 (487)
Q Consensus 172 ~~~f~v~gD~~~~~~~-~--~~----l~~l~-----------~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~ 233 (487)
..++++++|+|.+... . .. ++.|. ..+..-+|++||++...+...+-...+.|. ....
T Consensus 200 ~~~ialVSGL~igs~~~~~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~y~----~~~~ 275 (476)
T 3e0j_A 200 DRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYL----TKKT 275 (476)
T ss_dssp CCEEEEECCCCBTSSCHHHHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-------------C----HHHH
T ss_pred CCEEEEECCcccCCCcccchHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccchhhhhhhcc----cccc
Confidence 5689999999998762 1 11 23332 136789999999995321000000000000 0000
Q ss_pred cchhhHHHHHHHHhhhccccCCCEEEecCCcccccCccch------hhH---HhhcccCCCCCCCCCCCcceEEEEeCCE
Q 039280 234 QETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIERQAENQ------TFA---AYSSRFAFPSEESGSSSSLYYSFNAGGI 304 (487)
Q Consensus 234 ~~~y~~~w~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~------~~~---~y~~~f~~P~~~~~~~~~~yYsf~~g~v 304 (487)
...-....+.+.+++..+...+|+.+.|||||-....-.+ -|. .| ..+.. ..| -|.|+++++
T Consensus 276 ~~~~~~~~~~ld~~L~~l~~~i~V~lmPG~~DP~~~~lPQqplh~~lfp~s~~~-~~~~~-------vtN-P~~~~i~G~ 346 (476)
T 3e0j_A 276 QAASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAY-STLQL-------VTN-PYQATIDGV 346 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCEEEECCTTSSSCSSSSCCCCCTTSCHHHHTS-TTEEE-------CCS-SEEEEETTE
T ss_pred chhhHHHHHHHHHHHHhcccCceEEecCCCCCcccccCCCCCcCHHHhhhhhhc-CccEE-------eCC-CeEEEECCE
Confidence 0000123455666777788899999999999975332110 010 11 01111 122 255999999
Q ss_pred EEEEEcCcc-----cCCCChHHHHHHHHHhcccCC-CCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEE
Q 039280 305 HFVMLSAYI-----DYDKSSDQYKWLESDLGDVDR-EVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIV 378 (487)
Q Consensus 305 ~fi~Ldt~~-----~~~~~~~Q~~WL~~~L~~~~r-~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~Vdlv 378 (487)
+|++..... .+...+.-++.|++.|+-..- ..+|=.+ |.|...... +++-+.-.+++
T Consensus 347 ~~LgtsGqnidDi~ky~~~~~~l~~me~~LkwrHlAPTaPdTl-----~~yP~~~~D------------pfVi~~~PhVy 409 (476)
T 3e0j_A 347 RFLGTSGQNVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTL-----GCYPFYKTD------------PFIFPECPHVY 409 (476)
T ss_dssp EEEECSSHHHHHHHHHSCCCCHHHHHHHHHHBTCSCTTSCCC-----------CCSC------------TTSCSSCCSEE
T ss_pred EEEEECCCCHHHHHhcCCCCCHHHHHHHHHHHhccCCCCCCce-----eeccCCCCC------------ceeecCCCcEE
Confidence 999887532 122334567889999876210 0111000 111100000 22223457899
Q ss_pred EeCccccceec
Q 039280 379 FNGHVHAYERS 389 (487)
Q Consensus 379 lsGH~H~yeR~ 389 (487)
++||.|.|+-.
T Consensus 410 f~Gnq~~f~t~ 420 (476)
T 3e0j_A 410 FCGNTPSFGSK 420 (476)
T ss_dssp EEEEESSCEEE
T ss_pred EeCCCCcccee
Confidence 99999998765
|
| >2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.34 E-value=0.03 Score=44.98 Aligned_cols=91 Identities=19% Similarity=0.151 Sum_probs=55.3
Q ss_pred CCCCceEEEeec-cCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCcccc
Q 039280 47 GFQPEQIFVSLS-ARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTS 125 (487)
Q Consensus 47 ~~~P~qi~l~~~-~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~ 125 (487)
+..|..+++... ...+++.|+|.-....-+ ....=.|+|....+..+..... .
T Consensus 8 P~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g--------~i~~Y~v~~~~~~~~~~~~~~~------------------~ 61 (108)
T 2dm4_A 8 PDAPRNLQLSLPREAEGVIVGHWAPPIHTHG--------LIREYIVEYSRSGSKMWASQRA------------------A 61 (108)
T ss_dssp TTSCEEEEEECCTTCSSCEEEEEECCSCCSS--------CEEEEEEEEEETTCSCCEEEEE------------------S
T ss_pred CcCCcCeEEEEeccCCCEEEEEEcCCCCCCC--------cEEEEEEEEEECCCCCeEEecC------------------C
Confidence 346888887764 246899999987542100 0012345565544332222100 0
Q ss_pred CcEEEEEeCCCCCCCEEEEEEecCCC---CCcCceEEEEcCCC
Q 039280 126 GIIHHVLITGLQPNTLYEYECGDPSI---SAMSSSHYFRTMPV 165 (487)
Q Consensus 126 ~~~h~v~l~gL~P~T~Y~Y~vg~~~~---~~~s~~~~F~T~p~ 165 (487)
...++|++|+|+|.|.+||...+. ..+|+...|+|.+.
T Consensus 62 --~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 102 (108)
T 2dm4_A 62 --SNFTEIKNLLVNTLYTVRVAAVTSRGIGNWSDSKSITTIKG 102 (108)
T ss_dssp --SSEEEECSCCSSCEEEEEEEEEESSCEEEECCCEEEECCSC
T ss_pred --ccEEEeCCCCCCCEEEEEEEEECCCceeCCCCCEEEECCCC
Confidence 126789999999999999954332 25788889998643
|
| >2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.33 E-value=0.022 Score=45.98 Aligned_cols=94 Identities=11% Similarity=0.037 Sum_probs=54.9
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
+..|..+.+.-.-..+++.|+|......-+.. ...=.|+|....+..+..+. ..
T Consensus 9 P~~P~~~~~~~~~~~~sv~l~W~~P~~~~~~~-------i~~Y~v~~~~~~~~~~~~~~------~~------------- 62 (110)
T 2crz_A 9 PGPCLPPRLQGRPKAKEIQLRWGPPLVDGGSP-------ISCYSVEMSPIEKDEPREVY------QG------------- 62 (110)
T ss_dssp CCCCCCCEECSCCCSSEEEEECCCCSCCTTSC-------CCEEEEEEECTTSCCCEEEE------EE-------------
T ss_pred CCCCCCceeccccCCCEEEEEeCCCCCCCCce-------eEEEEEEEEeCCCCceEEEE------eC-------------
Confidence 34577777743334578999996532111110 12345666654333232221 00
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCCC---CCcCceEEEEcCCCC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPSI---SAMSSSHYFRTMPVS 166 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~~---~~~s~~~~F~T~p~~ 166 (487)
.....+|++|+|+|.|.+||...+. ..+|+...++|.+.+
T Consensus 63 ~~~~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~~~~~T~~~~ 105 (110)
T 2crz_A 63 SEVECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAPGS 105 (110)
T ss_dssp SCSEEEEESCCTTCEEEECCEEECSSCBCCCCCCEEEECCCSC
T ss_pred CcEEEEECCcCCCCEEEEEEEEEcCCccCCCCCccccccCCCC
Confidence 1235678999999999999964332 357788889887654
|
| >2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.31 E-value=0.04 Score=43.98 Aligned_cols=91 Identities=14% Similarity=0.083 Sum_probs=55.8
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
+..|..+++.... .+++.|+|.-....-+ ....=.|+|............ . .
T Consensus 8 P~~P~~l~~~~~~-~~si~l~W~~p~~~~g--------~i~~Y~v~~~~~~~~~~~~~~-----~------~-------- 59 (106)
T 2ed8_A 8 PGPVENLQAVSTS-PTSILITWEPPAYANG--------PVQGYRLFCTEVSTGKEQNIE-----V------D-------- 59 (106)
T ss_dssp CCCCEEEEEECSS-TTEEEEEEECCSSCSS--------CCCEEEEEEEETTTCCEEEEE-----E------C--------
T ss_pred CcCCceeEEEecC-CCEEEEEECCCCCCCC--------CeeEEEEEEEECCCCceEEEe-----C------C--------
Confidence 3468888876554 6799999987542111 012345667655432221110 0 0
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCCCC---CcCceEEEEcCCCC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPSIS---AMSSSHYFRTMPVS 166 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~~~---~~s~~~~F~T~p~~ 166 (487)
...++|++|+|+|.|.+||...+.. .+|....|+|....
T Consensus 60 -~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 101 (106)
T 2ed8_A 60 -GLSYKLEGLKKFTEYSLRFLAYNRYGPGVSTDDITVVTLSDS 101 (106)
T ss_dssp -SSCEEEESCCTTCEEEEEEEEECSSCEEEECCCEEEECCCCC
T ss_pred -ccEEEECCCCCCCEEEEEEEEEeCCccCCCcCCEEEEcCCCC
Confidence 1256789999999999999654322 46778889987553
|
| >1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.30 E-value=0.036 Score=45.06 Aligned_cols=95 Identities=19% Similarity=0.175 Sum_probs=55.5
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCC---CceEEEEEEEEeeeecCCCCCCccc
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSS---LTYQAEGYSLVYNQLYPPDGLQNYT 124 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~---~~~~~~g~~~~~~~~~~~~g~~~~~ 124 (487)
..|..+++.-.. .+++.|+|.-....... .....=.|+|...... ..... ..
T Consensus 10 ~~P~~~~~~~~~-~~si~l~W~~p~~~~~~------g~i~gY~v~y~~~~~~~~~~~~~~-----~~------------- 64 (114)
T 1x4y_A 10 AGPYITFTDAVN-ETTIMLKWMYIPASNNN------TPIHGFYIYYRPTDSDNDSDYKKD-----MV------------- 64 (114)
T ss_dssp SCCEEEEEECSS-SSCEEEEEECCCTTSCC------CCCCEEEEEECCTTSCSGGGCCCE-----EE-------------
T ss_pred CCCeEEEEEecC-CCEEEEEEeCCCchhcC------CccceEEEEEEECCCCCCcceeeE-----ec-------------
Confidence 457887775543 68999999876421000 0012235666544322 11000 00
Q ss_pred cCcEEEEEeCCCCCCCEEEEEEecCC---CCCcCceEEEEcCCCCC
Q 039280 125 SGIIHHVLITGLQPNTLYEYECGDPS---ISAMSSSHYFRTMPVSG 167 (487)
Q Consensus 125 ~~~~h~v~l~gL~P~T~Y~Y~vg~~~---~~~~s~~~~F~T~p~~~ 167 (487)
.+-...++|++|+|+|.|.+||..-+ ...+|+...|+|.+.+.
T Consensus 65 ~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~~~~ 110 (114)
T 1x4y_A 65 EGDRYWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETKARSG 110 (114)
T ss_dssp ETTCCEEEECSCCTTCEEEEEEEEECTTCCCCCCCCEEEECCCCCC
T ss_pred CCcEeEEEcCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCCCC
Confidence 01123588999999999999995422 23678889999987654
|
| >2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.27 E-value=0.018 Score=46.29 Aligned_cols=38 Identities=24% Similarity=0.428 Sum_probs=29.5
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCcCceEEEEcCCCC
Q 039280 129 HHVLITGLQPNTLYEYECGDPSI---SAMSSSHYFRTMPVS 166 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~~~---~~~s~~~~F~T~p~~ 166 (487)
..++|++|+|+|.|.+||...+. ..+|....|+|.+..
T Consensus 63 ~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 103 (108)
T 2djs_A 63 NTARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLTDS 103 (108)
T ss_dssp SEEEEESCCTTCEEEEEEEEEESSCEEEECCCEEEECCCSS
T ss_pred cEEEEcCCCCCCEEEEEEEEEeCCEECCCCCCEEEEeCCCC
Confidence 36778999999999999954332 257788899998764
|
| >2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.18 E-value=0.044 Score=44.59 Aligned_cols=94 Identities=17% Similarity=0.179 Sum_probs=55.0
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
+..|..+++.... .+++.|+|.-....-+ ....=.|+|........... ... ..
T Consensus 18 P~~P~~l~~~~~~-~~sv~l~W~~p~~~~~--------~i~~Y~v~~~~~~~~~~~~~-------~~~----------~~ 71 (119)
T 2ed7_A 18 PSAPRDVVPVLVS-SRFVRLSWRPPAEAKG--------NIQTFTVFFSREGDNRERAL-------NTT----------QP 71 (119)
T ss_dssp CCCCSCCEEEEEC-SSCEEEECCCCSCCSS--------CEEEEEEEEEESSCCCCEEE-------ECC----------CT
T ss_pred CcCCcceEEEecC-CCEEEEEEeCCCCCCC--------cEEEEEEEEEeCCCCcceee-------Eee----------cC
Confidence 4568888877543 6899999966432100 00123455554433222111 000 01
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCC---CCCcCceEEEEcCCCC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPS---ISAMSSSHYFRTMPVS 166 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~---~~~~s~~~~F~T~p~~ 166 (487)
....++|++|+|+|.|.+||...+ ...+|+...++|.+..
T Consensus 72 ~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 114 (119)
T 2ed7_A 72 GSLQLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPES 114 (119)
T ss_dssp TCCEEEECSCCSSSEEEECCEEEESSCBCSCCCCEEEECCCCS
T ss_pred CceEEEeCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCCC
Confidence 234678999999999999985422 2357888899997654
|
| >1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.09 E-value=0.025 Score=45.90 Aligned_cols=91 Identities=16% Similarity=0.148 Sum_probs=54.8
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
+..|..+++.-.. .+++.|+|......-+ ....=.|+|..........+..
T Consensus 18 P~~P~~l~~~~~~-~~si~l~W~~p~~~~~--------~i~~Y~v~~~~~~~~~~~~~~~-------------------- 68 (116)
T 1x5g_A 18 PGPAPNLRAYAAS-PTSITVTWETPVSGNG--------EIQNYKLYYMEKGTDKEQDVDV-------------------- 68 (116)
T ss_dssp CCCCSSCEEEEEE-TTEEEEECCCCSCCSS--------CCSEEEEEEEETTCCCCCCEEE--------------------
T ss_pred CcCCCccEEEecC-CCEEEEEEeCCCCCCC--------cccEEEEEEEECCCCccEEEec--------------------
Confidence 3467778776544 6799999976532101 0123456665544322211100
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCCC---CCcCceEEEEcCCCC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPSI---SAMSSSHYFRTMPVS 166 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~~---~~~s~~~~F~T~p~~ 166 (487)
....++|++|+|+|.|.+||..-+. ..+|....|+|.+..
T Consensus 69 ~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 111 (116)
T 1x5g_A 69 SSHSYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSDS 111 (116)
T ss_dssp CSSEEEECSCCTTCEEEEEEEEECSSCCCCBCCCCCEECCCSS
T ss_pred CCceEEEcCCCCCCEEEEEEEEEcCCCcCCCCCCEEEECCCCC
Confidence 1236788999999999999954322 257778889997654
|
| >1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.03 E-value=0.029 Score=45.99 Aligned_cols=96 Identities=22% Similarity=0.256 Sum_probs=55.8
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
...|..|++.--. .+++.|+|.-.....+..+ .....=.|+|.......... .+. ..
T Consensus 9 p~~P~~l~~~~~s-~tsi~lsW~~p~~~~~~~~----~~~~~Y~v~y~~~~~~~~~~------~~~------------~~ 65 (113)
T 1x5j_A 9 MMPPVGVQASILS-HDTIRITWADNSLPKHQKI----TDSRYYTVRWKTNIPANTKY------KNA------------NA 65 (113)
T ss_dssp CCCCEEEEEEEEE-TTEEEEEEECTTSCSSSCC----CSSCEEEEEECBSSSSSCCC------EEC------------CB
T ss_pred CCCCcceEEEEec-CCEEEEEecCCCCcccccc----CcCceEEEEEEECCCCCeEE------EEE------------ec
Confidence 4568998887655 7899999986532111000 00012356666521110000 000 01
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCC---CCCcCceEEEEcCCC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPS---ISAMSSSHYFRTMPV 165 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~---~~~~s~~~~F~T~p~ 165 (487)
-...++|+||+|+|.|.++|.... ...||....++|.+.
T Consensus 66 ~~~~~~i~gL~P~T~Y~f~V~A~~~~G~g~~S~~v~~~T~~~ 107 (113)
T 1x5j_A 66 TTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 107 (113)
T ss_dssp CSSEEEEESCCTTCEECCEEEEECSSCBCCCCCCCCEECCCS
T ss_pred CcCEEEeCCCCCCcEEEEEEEEecCCccCCCcccEEeeccCC
Confidence 123688999999999999995432 236888889999865
|
| >1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.01 E-value=0.046 Score=44.17 Aligned_cols=90 Identities=19% Similarity=0.177 Sum_probs=54.2
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
...|..+++.-.. .+++.|+|.-... + ....=.|+|............ ..
T Consensus 18 P~~P~~l~~~~~~-~~sv~l~W~~p~~--~--------~i~~Y~v~~~~~~~~~~~~~~-------------------~~ 67 (115)
T 1x5z_A 18 PGQPLNFKAEPES-ETSILLSWTPPRS--D--------TIANYELVYKDGEHGEEQRIT-------------------IE 67 (115)
T ss_dssp CCCCEEEEEECSS-SSEEEEEEECCSC--C--------CCCEEEECBEESSSCCCBCCE-------------------EC
T ss_pred CCCCccCEeeeCC-CCEEEEEEcCCCC--C--------CccEEEEEEEeCCCCCceEEe-------------------cC
Confidence 3468888875543 6899999976542 1 011234555443322111000 00
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCCCC---CcCceEEEEcCCCC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPSIS---AMSSSHYFRTMPVS 166 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~~~---~~s~~~~F~T~p~~ 166 (487)
....++|++|+|+|.|.+||...+.. .+|....|+|.+..
T Consensus 68 ~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 110 (115)
T 1x5z_A 68 PGTSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSS 110 (115)
T ss_dssp SSSEEEEECCCTTCEEEECEEEECSSCEEEECCCEEEECCCCC
T ss_pred CCcEEEECCCCCCCeEEEEEEEECCCcccCCCcCEEEecCCCC
Confidence 11367889999999999999654322 57778899998654
|
| >1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.92 E-value=0.028 Score=45.52 Aligned_cols=38 Identities=45% Similarity=0.641 Sum_probs=30.8
Q ss_pred EEeCCCCCCCEEEEEEecCCC---CCcCceEEEEcCCCCCC
Q 039280 131 VLITGLQPNTLYEYECGDPSI---SAMSSSHYFRTMPVSGP 168 (487)
Q Consensus 131 v~l~gL~P~T~Y~Y~vg~~~~---~~~s~~~~F~T~p~~~~ 168 (487)
++|+||+|+|.|.+||...+. +.||+...|+|.+..++
T Consensus 64 ~~i~~L~p~t~Y~f~V~A~~~~G~g~~S~~~~~~T~~~~gp 104 (107)
T 1x5a_A 64 VLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSPPSGP 104 (107)
T ss_dssp EEEESCCSSCEEEEEEEEECSSSCCCCCCCEEEECCCCSCC
T ss_pred EEECCCCCCCEEEEEEEEECCCccCCCCCCEEEEECCCCCC
Confidence 889999999999999965332 36888899999887654
|
| >2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.91 E-value=0.012 Score=46.75 Aligned_cols=90 Identities=22% Similarity=0.276 Sum_probs=51.7
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
..|..+++.-. ..+++.|+|......... + ....=.|+|............+ -
T Consensus 10 ~~P~~l~~~~~-~~~si~l~W~~p~~~~~~-----g-~i~~Y~i~~~~~~~~~~~~~~~--------------------~ 62 (103)
T 2edy_A 10 GFPQNLHVTGL-TTSTTELAWDPPVLAERN-----G-RIISYTVVFRDINSQQELQNIT--------------------T 62 (103)
T ss_dssp CCCEEEECSSB-CSSCEECEEECCCTTSCS-----S-CCCEEEEEEEETTSCCEEEEEE--------------------S
T ss_pred CCCeeeEEEec-CCCEEEEEECCCCCcCCC-----C-cEeEEEEEEEECCCCccEEEcC--------------------C
Confidence 45777776443 368999999876210000 0 0123356666554322111100 1
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCcCceEEEEcCC
Q 039280 128 IHHVLITGLQPNTLYEYECGDPSI---SAMSSSHYFRTMP 164 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~~---~~~s~~~~F~T~p 164 (487)
...++|+||+|+|.|.+||...+. ..+|+...|+|.|
T Consensus 63 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~p 102 (103)
T 2edy_A 63 DTRFTLTGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRTMP 102 (103)
T ss_dssp SSCCEECSCCTTCCEEEECCEECSSCBCCCCCCCCCCCCC
T ss_pred cceEEEcCCCCCCEEEEEEEEECCCCCCCCCCCEEEEecc
Confidence 124578999999999999954332 2577777788765
|
| >2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.91 E-value=0.036 Score=45.78 Aligned_cols=83 Identities=19% Similarity=0.195 Sum_probs=48.8
Q ss_pred cCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCcEEEEEeCCCCC
Q 039280 59 ARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGIIHHVLITGLQP 138 (487)
Q Consensus 59 ~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~h~v~l~gL~P 138 (487)
...+++.|+|.-.... |. | ...=.|+|.......+..... . .+ ....++|.+|+|
T Consensus 19 ~~~~sv~L~W~p~~dg-gs---P----I~~Y~I~yr~~~~~~w~~~~~----~------~~-------~~~~~~l~~L~p 73 (114)
T 2kbg_A 19 SSGKSFKLSITKQDDG-GA---P----ILEYIVKYRSKDKEDQWLEKK----V------QG-------NKDHIILEHLQW 73 (114)
T ss_dssp CSTTCEEEEECCCCCS-SS---C----CSEEEEEEEESSCCSCCEEEE----E------ET-------TTCCEEECCCCT
T ss_pred cCCCEEEEEEECCCCC-CC---c----ccEEEEEEEeCCCCCcEEeEE----c------CC-------CcCEEEEcCCCC
Confidence 4568999999754311 11 1 123467888764433332211 0 01 123577999999
Q ss_pred CCEEEEEEecCCCCCcCc--eEEEEcCCCC
Q 039280 139 NTLYEYECGDPSISAMSS--SHYFRTMPVS 166 (487)
Q Consensus 139 ~T~Y~Y~vg~~~~~~~s~--~~~F~T~p~~ 166 (487)
++.|.+||...+..+.|+ ...|+|.+.+
T Consensus 74 ~t~Y~frV~A~N~~G~s~pS~~~~~T~~~~ 103 (114)
T 2kbg_A 74 TMGYEVQITAANRLGYSEPTVYEFSMPPKP 103 (114)
T ss_dssp TCCEEEEEEEECTTSCEEEEEEEECCCCCC
T ss_pred CCEEEEEEEEEeCCcCcCCcCCEEEcCCCC
Confidence 999999997644334443 4678886544
|
| >3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic} | Back alignment and structure |
|---|
Probab=95.87 E-value=0.07 Score=42.00 Aligned_cols=88 Identities=16% Similarity=0.090 Sum_probs=52.4
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
..|.++++.-.. .+++.|+|...... ...=.|+|........... ... ..-
T Consensus 3 ~~P~~l~v~~~~-~~sv~l~W~~p~~~-----------i~~Y~v~y~~~~~~~~~~~----~~~-------------~~~ 53 (98)
T 3teu_A 3 DAPTDLQVTNVT-DTSITVSWTPPSAT-----------ITGYRITYTPSNGPGEPKE----LTV-------------PPS 53 (98)
T ss_dssp CCCEEEEEEEEC-SSCEEEEEECCSSC-----------CSEEEEEEEETTSCSCCEE----EEE-------------CTT
T ss_pred CCCCceEEEEec-CCEEEEEEeCCCCc-----------ccEEEEEEEECCCCCceEE----EEc-------------CCC
Confidence 358888876444 58999999865311 1234577764432111110 001 012
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCcCceEEEEcCC
Q 039280 128 IHHVLITGLQPNTLYEYECGDPSISAMSSSHYFRTMP 164 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~~~~~s~~~~F~T~p 164 (487)
...++|++|+|+|.|.++|......+.|+...+.+++
T Consensus 54 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~p~~~~~~~ 90 (98)
T 3teu_A 54 STSVTITGLTPGVEYVVSVYALKDNQESPPLVGTQTT 90 (98)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEEC
T ss_pred cCEEEecCCCCCCEEEEEEEEEeCCCCCCCeEEEecc
Confidence 2367899999999999999765544666655555544
|
| >2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.87 E-value=0.05 Score=43.60 Aligned_cols=93 Identities=17% Similarity=0.149 Sum_probs=53.6
Q ss_pred CCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCcE
Q 039280 49 QPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGII 128 (487)
Q Consensus 49 ~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~ 128 (487)
.|..+.+.... .+ +.|+|.-....-|.. ...=.|+|.......+... ..... ..+-.
T Consensus 9 ~P~~~~~~~~~-~~-v~l~W~~P~~~~G~p-------i~~Y~v~~~~~~~~~~~~~---~~~~~-----------~~~~~ 65 (105)
T 2haz_A 9 SPSIDQVEPYS-ST-AQVQFDEPEATGGVP-------ILKYKAEWRAVGEEVWHSK---WYDAK-----------EASME 65 (105)
T ss_dssp CCEEEEEEECS-SC-EEEEEECCSCCTTSC-------CCEEEEEEEETTCCCCEEE---EEEHH-----------HHHHH
T ss_pred CCCCCEEEEcC-Cc-EEEEEcCCcccCCcc-------ccEEEEEEEECCCCCCccc---eEEcc-----------ccCCc
Confidence 48777776655 34 999998754211100 1233567766543222111 00000 00112
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCcCceEEEEcCC
Q 039280 129 HHVLITGLQPNTLYEYECGDPSI---SAMSSSHYFRTMP 164 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~~~---~~~s~~~~F~T~p 164 (487)
..++|++|+|+|.|.+||...+. +.+|+...|+|.|
T Consensus 66 ~~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~T~p 104 (105)
T 2haz_A 66 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 104 (105)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred cEEEECCCCCCCEEEEEEEEEcCCccCCCcCCEeeEEec
Confidence 36789999999999999954321 3578888999986
|
| >2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.85 E-value=0.072 Score=42.18 Aligned_cols=90 Identities=20% Similarity=0.209 Sum_probs=54.0
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCC-CceEEEEEEEEeeeecCCCCCCcccc
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSS-LTYQAEGYSLVYNQLYPPDGLQNYTS 125 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~-~~~~~~g~~~~~~~~~~~~g~~~~~~ 125 (487)
+..|..+.+.-.. .+++.|+|..... . ....=.|+|...... .+..+ .+
T Consensus 8 P~~P~~~~~~~~~-~~sv~l~W~~~~~---~-------~i~~Y~v~~~~~~~~~~~~~~-------------~~------ 57 (106)
T 2dju_A 8 PKPPIDLVVTETT-ATSVTLTWDSGNS---E-------PVTYYGIQYRAAGTEGPFQEV-------------DG------ 57 (106)
T ss_dssp CCCCEEEEEEEEE-TTEEEEEEECCCS---S-------CCSEEEEEEEETTCCSCCCCB-------------CC------
T ss_pred CcCCCCcEEEecc-CCEEEEEEcCCCC---C-------CceEEEEEEEECCCCCCeEEc-------------cC------
Confidence 3468888776543 5799999986421 0 012345666554321 11110 00
Q ss_pred CcEEEEEeCCCCCCCEEEEEEecCCC---CCcCceEEEEcCCCC
Q 039280 126 GIIHHVLITGLQPNTLYEYECGDPSI---SAMSSSHYFRTMPVS 166 (487)
Q Consensus 126 ~~~h~v~l~gL~P~T~Y~Y~vg~~~~---~~~s~~~~F~T~p~~ 166 (487)
.....++|++|+|+|.|.+||...+. ..+|....++|.+..
T Consensus 58 ~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~~~~S~~~~~~T~~~~ 101 (106)
T 2dju_A 58 VATTRYSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQS 101 (106)
T ss_dssp CCSSEEEEESCCTTCEEEEEEEEECSSCBCCCCCCEEEECCCSS
T ss_pred CCccEEEEeCCCCCcEEEEEEEEEeCCccCCCcccEEeEcCCCC
Confidence 01235688999999999999965332 257778888887654
|
| >2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.84 E-value=0.11 Score=41.30 Aligned_cols=90 Identities=16% Similarity=0.186 Sum_probs=50.8
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
+..|. +.|... ..+++.|+|.-....-| ....=.|+|........... ... .
T Consensus 8 P~~p~-~~v~~~-~~~sv~l~W~~p~~~~g--------~i~~Y~v~~~~~~~~~~~~~-----~~~-------------~ 59 (107)
T 2dn7_A 8 PGRPT-MMISTT-AMNTALLQWHPPKELPG--------ELLGYRLQYCRADEARPNTI-----DFG-------------K 59 (107)
T ss_dssp CCCCE-EEEEEC-STTEEEEEEECCSSCSS--------CCCEEEEEEEETTCSSCEEE-----EEE-------------T
T ss_pred CCCCc-EeEEec-CCCEEEEEECCCCCCCC--------ceeEEEEEEEECCCCCCEEE-----EeC-------------C
Confidence 34566 566555 46899999987542111 01234567765543322221 000 1
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCCCCC---cCceEEEEcCCC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPSISA---MSSSHYFRTMPV 165 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~~~~---~s~~~~F~T~p~ 165 (487)
....++|++|+|+|.|.+||...+..+ +|. ..|+|...
T Consensus 60 ~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~-~~~~T~~~ 100 (107)
T 2dn7_A 60 DDQHFTVTGLHKGTTYIFRLAAKNRAGLGEEFE-KEIRTPED 100 (107)
T ss_dssp TCCEEEEECCCTTCEEEEEEEEEETTEEEEEEE-EEEECCCC
T ss_pred CccEEEeCCCCCCCEEEEEEEEEcCCcccCCee-eEEeCCCC
Confidence 123677899999999999996543333 333 45777543
|
| >2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.84 E-value=0.032 Score=45.03 Aligned_cols=92 Identities=17% Similarity=0.157 Sum_probs=54.8
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCC--CceEEEEEEEEeeeecCCCCCCcccc
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSS--LTYQAEGYSLVYNQLYPPDGLQNYTS 125 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~--~~~~~~g~~~~~~~~~~~~g~~~~~~ 125 (487)
..|..+++.-.. .+++.|+|.-....-| ....=.|+|....+. ...... .. .
T Consensus 9 ~~p~~l~~~~~~-~~sv~l~W~~p~~~~g--------~i~~Y~v~~~~~~~~~~~~~~~~------~~-----------~ 62 (109)
T 2e7h_A 9 PAVSDIRVTRSS-PSSLSLAWAVPRAPSG--------AVLDYEVKYHEKGAEGPSSVRFL------KT-----------S 62 (109)
T ss_dssp CCCCCCEEEEEE-TTEEEEECCCCCCSSS--------CCCEEEEEEEETTCCSTTTSEEE------EE-----------S
T ss_pred CCCCccEEEecC-CCEEEEEeCCCCCCCC--------cEeEEEEEEEECCCCCCceeEEE------cc-----------C
Confidence 447777776544 6899999976532111 012335666554311 111110 00 0
Q ss_pred CcEEEEEeCCCCCCCEEEEEEecCCC---CCcCceEEEEcCCCCC
Q 039280 126 GIIHHVLITGLQPNTLYEYECGDPSI---SAMSSSHYFRTMPVSG 167 (487)
Q Consensus 126 ~~~h~v~l~gL~P~T~Y~Y~vg~~~~---~~~s~~~~F~T~p~~~ 167 (487)
. ..++|++|+|+|.|.+||...+. ..+|+...|+|.+...
T Consensus 63 ~--~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~ 105 (109)
T 2e7h_A 63 E--NRAELRGLKRGASYLVQVRARSEAGYGPFGQEHHSQTQLDSG 105 (109)
T ss_dssp S--SEEEEESCCTTSCEEEEEEEECSSCBCCCCSCEECCCCCCSS
T ss_pred C--CEEEECCCCCCCeEEEEEEEEeCCccCCCCCCEEEEcCCCCC
Confidence 1 26789999999999999954332 3578889999987643
|
| >1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.83 E-value=0.075 Score=42.61 Aligned_cols=37 Identities=22% Similarity=0.203 Sum_probs=28.6
Q ss_pred EEEeCCCCCCCEEEEEEecCCCC---CcCceEEEEcCCCC
Q 039280 130 HVLITGLQPNTLYEYECGDPSIS---AMSSSHYFRTMPVS 166 (487)
Q Consensus 130 ~v~l~gL~P~T~Y~Y~vg~~~~~---~~s~~~~F~T~p~~ 166 (487)
.++|++|+|+|.|.|||...+.. .+|....++|.+..
T Consensus 65 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 104 (109)
T 1x5x_A 65 AYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPDS 104 (109)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCEEEECCCEEEECCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCCCcCCccCEEeEeCCCC
Confidence 56789999999999999654432 46777888888654
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A | Back alignment and structure |
|---|
Probab=95.77 E-value=0.01 Score=59.12 Aligned_cols=24 Identities=21% Similarity=0.444 Sum_probs=19.7
Q ss_pred HHHHHHHHHcCCcEEEeCccccce
Q 039280 364 VEMEDLLYYYGVDIVFNGHVHAYE 387 (487)
Q Consensus 364 ~~l~~l~~~~~VdlvlsGH~H~ye 387 (487)
+.+..++..++.++++.||+|.-+
T Consensus 268 ~~~~~fl~~~~~~~IV~GHt~~~~ 291 (342)
T 2z72_A 268 AELDTILQHFNVNHIVVGHTSQER 291 (342)
T ss_dssp HHHHHHHHHHTCSEEEECSSCCSS
T ss_pred HHHHHHHHHCCCcEEEECCCcccc
Confidence 455677888899999999999754
|
| >1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.77 E-value=0.084 Score=43.71 Aligned_cols=95 Identities=16% Similarity=0.160 Sum_probs=55.4
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
+..|..+++.-.. .+++.|+|......-| ....=.|+|........... .... ..
T Consensus 28 P~~P~~l~~~~~~-~~sv~l~W~~p~~~~g--------~i~~Y~v~~~~~~~~~~~~~---~~~~-------------~~ 82 (130)
T 1wfo_A 28 PGPPMGILFPEVR-TTSVRLIWQPPAAPNG--------IILAYQITHRLNTTTANTAT---VEVL-------------AP 82 (130)
T ss_dssp CCCCCCCEEEEEC-SSEEEEECCCCSCCCS--------CCCEEEEEEEESSCCCSCCC---EEEE-------------CT
T ss_pred CCCCCceEEEecC-CCEEEEEEcCCCCCCC--------ceEEEEEEEEECCCCCceEE---EEEe-------------CC
Confidence 4568888776654 6899999976532111 01133556655432111000 0000 11
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCCCC---CcCceEEEEcCCCC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPSIS---AMSSSHYFRTMPVS 166 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~~~---~~s~~~~F~T~p~~ 166 (487)
....++|++|+|+|.|.+||...+.. .+|....|+|.+..
T Consensus 83 ~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 125 (130)
T 1wfo_A 83 SARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKRS 125 (130)
T ss_dssp TCCEEEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECCSSCC
T ss_pred CceEEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEecCCCC
Confidence 23568899999999999999654432 46667789887654
|
| >3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.76 E-value=0.16 Score=40.18 Aligned_cols=81 Identities=19% Similarity=0.201 Sum_probs=48.6
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
..|..+++.-.. .+++.|+|.-.... ...=.|+|........... ... ..-
T Consensus 3 ~~P~~l~~~~~~-~~sv~lsW~pP~~~-----------i~~Y~v~y~~~~~~~~~~~----~~~-------------~~~ 53 (100)
T 3b83_A 3 QPPFNIKVTNIT-LTTAVVTWQPPILP-----------IEGILVTFGRKNDPSDETT----VDL-------------TSS 53 (100)
T ss_dssp CCCEEEEEESCC-SSCEEEEEECCSSC-----------CSEEEEEEEESSCTTTCEE----EEE-------------CTT
T ss_pred ccCCccEEEEec-CCEEEEEEcCCccc-----------CCEEEEEEEECCCCCCceE----EEE-------------CCc
Confidence 458888876543 68999999654321 1234677765442211110 000 113
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCcCce
Q 039280 128 IHHVLITGLQPNTLYEYECGDPSISAMSSS 157 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~~~~~s~~ 157 (487)
...++|+||+|+|.|.+||...+..+.|+.
T Consensus 54 ~t~~~i~~L~p~t~Y~~~V~A~n~~g~s~p 83 (100)
T 3b83_A 54 ITSLTLTNLEPNTTYEIRIVARNGQQYSPP 83 (100)
T ss_dssp EEEEEECSCCTTCEEEEEEEEEETTEECCC
T ss_pred ceEEEECCCCCCCEEEEEEEEEeCCCCCCC
Confidence 457889999999999999976543455543
|
| >2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.76 E-value=0.09 Score=43.08 Aligned_cols=90 Identities=13% Similarity=0.149 Sum_probs=53.2
Q ss_pred CCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCcE
Q 039280 49 QPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGII 128 (487)
Q Consensus 49 ~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~ 128 (487)
.|..+++.... .+++.|+|......... + ....=.|+|....+...... . ....
T Consensus 31 ~P~~l~~~~~~-~~sv~l~W~~p~~~~~~-----g-~i~~Y~v~~~~~~~~~~~~~------~-------------~~~~ 84 (124)
T 2ed9_A 31 PPQNVSLEVVN-SRSIKVSWLPPPSGTQN-----G-FITGYKIRHRKTTRRGEMET------L-------------EPNN 84 (124)
T ss_dssp CCBSCCEEEEE-TTEEEEECBCCCTTTCC-----S-CCCEEEEEEEESSSSCCEEE------E-------------CSSC
T ss_pred CCeeeEEEEcC-CCEEEEEEECcCCcCCC-----c-EEeEEEEEEEECCCCcceEE------e-------------cCCc
Confidence 57777775544 67999999765421000 0 01223566665543222110 0 0122
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCcCceEEEEcCC
Q 039280 129 HHVLITGLQPNTLYEYECGDPSI---SAMSSSHYFRTMP 164 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~~~---~~~s~~~~F~T~p 164 (487)
..++|++|+|+|.|.+||..... ..+|....|+|..
T Consensus 85 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~e 123 (124)
T 2ed9_A 85 LWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETPE 123 (124)
T ss_dssp SEEEEECCCSSCEEEECEEEECSSCBCCCCCCEEEECCC
T ss_pred CEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCC
Confidence 36789999999999999954322 3578888898864
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* | Back alignment and structure |
|---|
Probab=95.67 E-value=0.0051 Score=60.31 Aligned_cols=23 Identities=17% Similarity=0.073 Sum_probs=19.1
Q ss_pred HHHHHHHHHcCCcEEEeCccccc
Q 039280 364 VEMEDLLYYYGVDIVFNGHVHAY 386 (487)
Q Consensus 364 ~~l~~l~~~~~VdlvlsGH~H~y 386 (487)
+.....++++++++++-||.-..
T Consensus 223 ~~~~~fl~~n~l~~iir~Hq~~~ 245 (309)
T 2ie4_C 223 DISETFNHANGLTLVSRAHQLVM 245 (309)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCT
T ss_pred HHHHHHHHHcCCeEEEecCccee
Confidence 56678889999999999998653
|
| >2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.65 E-value=0.076 Score=43.35 Aligned_cols=92 Identities=14% Similarity=0.072 Sum_probs=54.1
Q ss_pred CCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCcE
Q 039280 49 QPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGII 128 (487)
Q Consensus 49 ~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~ 128 (487)
.|..+++.-.. .+++.|+|.-... +. ...=.|+|....+...... .... .+..
T Consensus 21 ~P~~l~~~~~~-~~sv~l~W~~p~~--g~--------i~~Y~v~~~~~~~~~~~~~---~~~~-------------~~~~ 73 (119)
T 2ee2_A 21 APTEVGVKVLS-SSEISVHWEHVLE--KI--------VESYQIRYWAAHDKEEAAN---RVQV-------------TSQE 73 (119)
T ss_dssp CCCSCEEEEEE-TTEEEEECCCCSC--TT--------CCEEEEEEEESSSCGGGCE---EEEE-------------ETTC
T ss_pred CCCcEEEEEcc-CCEEEEEecCCCC--Cc--------cceEEEEEEECCCcccCcE---EEEc-------------CCCE
Confidence 57777775444 6799999976542 11 1233566654432211100 0000 0112
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCcCceEEEEcCCCCC
Q 039280 129 HHVLITGLQPNTLYEYECGDPSI---SAMSSSHYFRTMPVSG 167 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~~~---~~~s~~~~F~T~p~~~ 167 (487)
..++|+||+|+|.|.+||...+. ..+|....|+|.+.+.
T Consensus 74 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~p 115 (119)
T 2ee2_A 74 YSARLENLLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKASG 115 (119)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSSSCCCCCCCEEEECCCCCC
T ss_pred eEEEECCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCCCCC
Confidence 36789999999999999954322 3578888999976554
|
| >1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.63 E-value=0.12 Score=41.77 Aligned_cols=89 Identities=12% Similarity=0.033 Sum_probs=52.4
Q ss_pred CCCceEEEeec-cCCCcEEEEEEcCCC--CCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccc
Q 039280 48 FQPEQIFVSLS-ARYDSVWISWITGEF--QIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYT 124 (487)
Q Consensus 48 ~~P~qi~l~~~-~~~~~~~V~W~T~~~--~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~ 124 (487)
..|..+++... +.++++.|+|..... .... ....-.|+|....+.....+.. .
T Consensus 9 ~pP~~l~v~~~~~~~~~l~lsW~~P~~w~~~~~-------~~l~Y~v~y~~~~~~~w~~~~~-----~------------ 64 (109)
T 1uc6_A 9 DPPENVVARPVPSNPRRLEVTWQTPSTWPDPES-------FPLKFFLRYRPLILDQWQHVEL-----S------------ 64 (109)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEECCTTCCCTTT-------TTBCEEEEEEESSSCCCCCEEE-----S------------
T ss_pred CCCcceEEEEcCCCCCEEEEEECCCCCccCCCc-------EEEEEEEEEEECCCCCcEEEec-----c------------
Confidence 34888888874 346899999987542 0000 0124567787765432221110 0
Q ss_pred cCcEEEEEeCCCCCCCEEEEEEecCC--CC---CcCceEEEEc
Q 039280 125 SGIIHHVLITGLQPNTLYEYECGDPS--IS---AMSSSHYFRT 162 (487)
Q Consensus 125 ~~~~h~v~l~gL~P~T~Y~Y~vg~~~--~~---~~s~~~~F~T 162 (487)
....+.|.+|+|+|.|..||.... .+ .||....++|
T Consensus 65 --~~~~~~l~~L~p~t~Y~~~VRa~~~g~g~wS~WS~~~~~~~ 105 (109)
T 1uc6_A 65 --NGTAHTITDAYAGKEYIIQVAAKDNEIGTWSDWSVAAHATP 105 (109)
T ss_dssp --SCSEEEETTCCSSSCEEEEEECCBSSSCCCCCCCEEEEECC
T ss_pred --cCCEEEEeCCCCCCEEEEEEEEEeCCCCCcCcCCCCeeeee
Confidence 012567899999999999996542 12 4555555544
|
| >2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A | Back alignment and structure |
|---|
Probab=95.53 E-value=0.14 Score=40.99 Aligned_cols=90 Identities=17% Similarity=0.089 Sum_probs=50.5
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCC-CceEEEEEEEEeeeecCCCCCCccccC
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSS-LTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~-~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
..|.++++.-.. .+++.|+|.-.... ...=.|+|...... ..... .. .+
T Consensus 4 ~~P~~l~v~~~t-~~sv~lsW~~p~~~-----------i~~Y~v~y~~~~~~~~~~~~-----~v-------------~~ 53 (104)
T 2rb8_A 4 DAPSQIEVKDVT-DTTALITWMPPSQP-----------VDGFELTYGIKDVPGDRTTI-----DL-------------TE 53 (104)
T ss_dssp CCCEEEEEESCC-SSCEEEEEECCSSC-----------CSEEEEEEEETTCTTCCEEE-----EE-------------ET
T ss_pred CCCCccEEEEec-CCeEEEEEcCCCCc-----------cceEEEEEEECcCCCceEEE-----Ec-------------CC
Confidence 458888876533 68999999654310 12345677554311 11111 00 01
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCCCCCcC--ceEEEEcCCCCC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPSISAMS--SSHYFRTMPVSG 167 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~~~~~s--~~~~F~T~p~~~ 167 (487)
-...++|+||+|+|.|.++|......+.+ ....|+|.+...
T Consensus 54 ~~~~~~l~~L~p~t~Y~~~V~A~~~~g~s~p~~~~~~T~~~~~ 96 (104)
T 2rb8_A 54 DENQYSIGNLKPDTEYEVSLISRRGDMSSNPAKETFTTGLAAA 96 (104)
T ss_dssp TCCEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCC---
T ss_pred CcCEEEeCCCCCCCEEEEEEEEEeCCccCCCEEEEEECCCCcc
Confidence 12367899999999999999543322222 345788876543
|
| >2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.41 E-value=0.13 Score=42.59 Aligned_cols=39 Identities=21% Similarity=0.021 Sum_probs=29.3
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC---CCCcCceEEEEcCCCC
Q 039280 128 IHHVLITGLQPNTLYEYECGDPS---ISAMSSSHYFRTMPVS 166 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~---~~~~s~~~~F~T~p~~ 166 (487)
...++|++|+|+|.|.+||.... .+.+|....|+|....
T Consensus 78 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 119 (134)
T 2edx_A 78 HSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDV 119 (134)
T ss_dssp CSEEEEESCCTTCEEEEEEEEEETTBCCCCCCCEEEECCCCS
T ss_pred ccEEEeCCCCCCCEEEEEEEEEcCCCcCCCCCCEEeecCCCC
Confidence 35678999999999999995422 1357778889987554
|
| >1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.38 E-value=0.12 Score=41.91 Aligned_cols=37 Identities=22% Similarity=0.200 Sum_probs=28.1
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCcCceEEEEcCCCC
Q 039280 130 HVLITGLQPNTLYEYECGDPSI---SAMSSSHYFRTMPVS 166 (487)
Q Consensus 130 ~v~l~gL~P~T~Y~Y~vg~~~~---~~~s~~~~F~T~p~~ 166 (487)
.++|++|+|+|.|.|||...+. ..+|+...|+|.+..
T Consensus 74 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 113 (118)
T 1x3d_A 74 QFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTSGCS 113 (118)
T ss_dssp EEEEESCCTTCEEEEECCEEESSCBCCCCCCEEEECSCCC
T ss_pred EEEeCCCCCCCEEEEEEEEEECCCCCCCccCEEEEcCCCC
Confidence 4678999999999999954322 257778889887654
|
| >2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.32 E-value=0.12 Score=41.67 Aligned_cols=39 Identities=21% Similarity=0.235 Sum_probs=28.1
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC--CCcCceEEEEcCCCCC
Q 039280 129 HHVLITGLQPNTLYEYECGDPSI--SAMSSSHYFRTMPVSG 167 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~~~--~~~s~~~~F~T~p~~~ 167 (487)
..++|+||+|+|.|.++|..... ...+....++|.|.+.
T Consensus 59 t~~~i~gL~PgT~Y~~~V~A~~~~~~~~p~~~~~~T~p~p~ 99 (104)
T 2dle_A 59 PRAVIPGLRSSTFYNITVCPVLGDIEGTPGFLQVHTPPVPS 99 (104)
T ss_dssp SEEECCSCCSSCEEEEEEEEESSSCCCBCEEEEEECCCCSC
T ss_pred CEEEECCCCCCCEEEEEEEEEECCcccCCeeEEEEccCCCC
Confidence 37889999999999999865322 2344466788887654
|
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=95.31 E-value=0.0082 Score=59.33 Aligned_cols=38 Identities=16% Similarity=0.131 Sum_probs=24.2
Q ss_pred cEEEEEecCCCCCCh-HHHHHHHHHcCCCEEEEcCcccc
Q 039280 173 NRIAVVGDLGLTYNT-TTTVAHLMSNHPDLLLLIGDLSY 210 (487)
Q Consensus 173 ~~f~v~gD~~~~~~~-~~~l~~l~~~~pdfvl~~GDl~y 210 (487)
.+++++||+|..... .+.++.+.....+-++++||++.
T Consensus 57 ~~i~viGDIHG~~~~L~~ll~~~g~~~~~~~vflGD~VD 95 (330)
T 1fjm_A 57 APLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVD 95 (330)
T ss_dssp SSEEEECBCTTCHHHHHHHHHHHCSTTSSCEEECSCCSS
T ss_pred CceEEecCCCCCHHHHHHHHHHhCCCCcceEEeCCCcCC
Confidence 468999999976321 12222222234577999999995
|
| >2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.27 E-value=0.06 Score=44.05 Aligned_cols=37 Identities=32% Similarity=0.256 Sum_probs=27.3
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCcCceEEEEcCCCC
Q 039280 130 HVLITGLQPNTLYEYECGDPSI---SAMSSSHYFRTMPVS 166 (487)
Q Consensus 130 ~v~l~gL~P~T~Y~Y~vg~~~~---~~~s~~~~F~T~p~~ 166 (487)
..+|++|+|+|.|.|||...+. ..+|+...++|.+.+
T Consensus 76 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 115 (120)
T 2crm_A 76 EHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTPAVS 115 (120)
T ss_dssp EEEECSCCTTSCEEEEEEEEETTEECCCCCCCCCCCCCCS
T ss_pred EEEECCCCCCCEEEEEEEEEcCCccCCCcccEEEEcCCCC
Confidence 5678999999999999964332 256777778876543
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=95.25 E-value=0.29 Score=43.87 Aligned_cols=103 Identities=13% Similarity=0.152 Sum_probs=57.9
Q ss_pred CCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCcE
Q 039280 49 QPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGII 128 (487)
Q Consensus 49 ~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~ 128 (487)
.|..+.+.-.. .+++.|+|.-.... ....=.|+|...++....... .. ..-.
T Consensus 25 ~P~~l~~~~~~-~~sv~lsW~~p~~~----------~i~~Y~v~~~~~~~~~~~~~~----~~-------------~~~~ 76 (203)
T 2gee_A 25 QPTDLSFVDIT-DSSIGLRWTPLNSS----------TIIGYRITVVAAGEGIPIFED----FV-------------DSSV 76 (203)
T ss_dssp CCEEEEEECCT-TTCEEEEEECCSSS----------SCCEEEEEEEESSSSSCCEEE----EE-------------ETTC
T ss_pred CCCccEEEecC-CCEEEEEecCCCCC----------CccEEEEEEEECCCCCCceeE----Ec-------------CCCc
Confidence 57777776544 67999999875420 112345667655433221110 00 0112
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCcCceEEEEcCCCCCCCCCCcEEEEEec
Q 039280 129 HHVLITGLQPNTLYEYECGDPSISAMSSSHYFRTMPVSGPSDYPNRIAVVGD 180 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~~~~~~s~~~~F~T~p~~~~~~~~~~f~v~gD 180 (487)
..++|++|+|+|.|.++|..-...+.|....++|....... ..+++...++
T Consensus 77 ~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~t~~~~p~P-~~l~~~~~~~ 127 (203)
T 2gee_A 77 GYYTVTGLEPGIDYDISVYTVKNGGESTPTTLTQQTAVPPP-TDLRFTNIGP 127 (203)
T ss_dssp CEEEECSCCTTCEEEEEEEEESSSCBCCCEEEEEECCCCCC-EEEEEEEEET
T ss_pred cEEEeCCCCCCCEEEEEEEEEeCCCccccEeeeecCCCcCC-CceEEEEcCC
Confidence 36788999999999999965444456666666654333221 2344444444
|
| >2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.14 E-value=0.2 Score=40.62 Aligned_cols=89 Identities=16% Similarity=0.071 Sum_probs=52.1
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
..|..++++--. .+++.|+|.-... ....=.|+|....+.....+. . .+-
T Consensus 9 ~pP~~l~~~~vt-~tsi~vsW~pp~~-----------~i~~Y~I~y~~~~~~~~~~~~-----v-------------~~~ 58 (108)
T 2ee3_A 9 APPRHLGFSDVS-HDAARVFWEGAPR-----------PVRLVRVTYVSSEGGHSGQTE-----A-------------PGN 58 (108)
T ss_dssp CCSSCEEEESCC-SSCEEEEESCCSS-----------CCSEEEEEEEETTTCCBCCEE-----E-------------ETT
T ss_pred CCCceEEEEEcc-CCeEEEEeeCCCC-----------CccEEEEEEEeCCCCceeEEE-----c-------------CCC
Confidence 458888876433 6899999965321 112346677655432111110 0 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCcCc--eEEEEcCCCC
Q 039280 128 IHHVLITGLQPNTLYEYECGDPSISAMSS--SHYFRTMPVS 166 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~~~~~s~--~~~F~T~p~~ 166 (487)
...+.|++|+|+|.|..+|..-...+.|. ...|+|.+.+
T Consensus 59 ~t~~~l~~L~p~T~Y~v~V~A~~~~g~s~p~~~~~~T~~vP 99 (108)
T 2ee3_A 59 ATSAMLGPLSSSTTYTVRVTCLYPGGGSSTLTGRVTTKKAP 99 (108)
T ss_dssp CCEEEECSCCSSCEEEEEEEEECTTSCEEEEEEEEECCCCC
T ss_pred cCEEEcCCCCCCCEEEEEEEEEeCCCcCCCccCEEEeCCCC
Confidence 23678999999999999996543233333 3468887433
|
| >2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.12 E-value=0.21 Score=41.15 Aligned_cols=37 Identities=11% Similarity=-0.026 Sum_probs=28.9
Q ss_pred EEEeCCCCCCCEEEEEEecCC---CCCcCceEEEEcCCCC
Q 039280 130 HVLITGLQPNTLYEYECGDPS---ISAMSSSHYFRTMPVS 166 (487)
Q Consensus 130 ~v~l~gL~P~T~Y~Y~vg~~~---~~~~s~~~~F~T~p~~ 166 (487)
.++|++|+|+|.|.+||...+ .+.+|+...|+|.+..
T Consensus 80 ~~~l~~L~p~t~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~~ 119 (124)
T 2dbj_A 80 RARISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFIPAHS 119 (124)
T ss_dssp CEEEECCCSSSEEEECEEEEESSCBCCCCCCEEEECCCSC
T ss_pred eEEecCCCCCCEEEEEEEEECCCccCCCCCCEEEEcCCCC
Confidence 567899999999999995422 2368889999998654
|
| >2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.10 E-value=0.17 Score=40.97 Aligned_cols=83 Identities=18% Similarity=0.245 Sum_probs=45.9
Q ss_pred cCCCCCCCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCC
Q 039280 41 NNAQGEGFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGL 120 (487)
Q Consensus 41 ~~~~~~~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~ 120 (487)
+...+.+..|..+++.-.. .+++.|+|.-.... | ....=.|+|....+...... . . .
T Consensus 12 ~t~~~~P~~P~~l~~~~~~-~~sv~l~W~~p~~~-g--------~i~~Y~v~~~~~~~~~~~~~-------~-~---~-- 68 (118)
T 2yrz_A 12 RLTAGVPDTPTRLVFSALG-PTSLRVSWQEPRCE-R--------PLQGYSVEYQLLNGGELHRL-------N-I---P-- 68 (118)
T ss_dssp SSSCSCCCCCCCCEECCCB-TTEEEEECCCCCCS-S--------CEEEEEEEEEBSSSCCEEEE-------E-E---S--
T ss_pred ecCCCCCCCCCceEEEeCC-CCEEEEEeCCCCCC-C--------CccEEEEEEEECCCCceEEE-------E-c---C--
Confidence 3344445678888765433 68999999654321 1 00123455554433211111 0 0 0
Q ss_pred CccccCcEEEEEeCCCCCCCEEEEEEecCC
Q 039280 121 QNYTSGIIHHVLITGLQPNTLYEYECGDPS 150 (487)
Q Consensus 121 ~~~~~~~~h~v~l~gL~P~T~Y~Y~vg~~~ 150 (487)
......++|++|+|+|.|.+||...+
T Consensus 69 ----~~~~~~~~i~~L~p~t~Y~~~V~A~n 94 (118)
T 2yrz_A 69 ----NPAQTSVVVEDLLPNHSYVFRVRAQS 94 (118)
T ss_dssp ----CTTCCEEEEESCCTTCEEEEEEEEEE
T ss_pred ----CCCcCEEEeCCCCCCCEEEEEEEEEc
Confidence 01123677899999999999996543
|
| >1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.09 E-value=0.16 Score=41.46 Aligned_cols=79 Identities=19% Similarity=0.228 Sum_probs=44.7
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccC-CCCceEEEEEEEEeeeecCCCCCCcccc
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFR-SSLTYQAEGYSLVYNQLYPPDGLQNYTS 125 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~-~~~~~~~~g~~~~~~~~~~~~g~~~~~~ 125 (487)
+..|..+.+.-.. .+++.|+|.-... +.. ....=.|+|.... +..+..+... . .
T Consensus 18 P~~P~~~~~~~~~-~~sv~l~W~p~~~--~~~------~i~~Y~v~~~~~~~~~~w~~~~~~---~-------------~ 72 (121)
T 1x4z_A 18 PEAPDRPTISTAS-ETSVYVTWIPRGN--GGF------PIQSFRVEYKKLKKVGDWILATSA---I-------------P 72 (121)
T ss_dssp CCCCCCCEEEECC-SSEEEEECCCCCC--TTS------CCCEEEEEEEESSSCCCCEEEEEE---E-------------C
T ss_pred CccCCCCEEEEcc-CCEEEEEEECCCC--CCC------cceEEEEEEEECCCCCceEEeecc---c-------------C
Confidence 4557777775543 6799999983221 100 0123456776654 2222222110 0 0
Q ss_pred CcEEEEEeCCCCCCCEEEEEEecCC
Q 039280 126 GIIHHVLITGLQPNTLYEYECGDPS 150 (487)
Q Consensus 126 ~~~h~v~l~gL~P~T~Y~Y~vg~~~ 150 (487)
.....++|++|+|+|.|.|||...+
T Consensus 73 ~~~~~~~v~~L~p~t~Y~frV~A~n 97 (121)
T 1x4z_A 73 PSRLSVEITGLEKGISYKFRVRALN 97 (121)
T ss_dssp TTCCEEEEESCCTTCEEEEEEEEEE
T ss_pred CCcCEEEECCCCCCCEEEEEEEEEc
Confidence 1224678899999999999996533
|
| >2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.06 E-value=0.097 Score=43.61 Aligned_cols=36 Identities=22% Similarity=0.244 Sum_probs=26.8
Q ss_pred EEEeCCCCCCCEEEEEEecCCCC--CcCceEEEEcCCC
Q 039280 130 HVLITGLQPNTLYEYECGDPSIS--AMSSSHYFRTMPV 165 (487)
Q Consensus 130 ~v~l~gL~P~T~Y~Y~vg~~~~~--~~s~~~~F~T~p~ 165 (487)
..+|+||+|+|.|.|||...+.. ..|+...++|.+.
T Consensus 81 ~~~v~gL~p~t~Y~frV~A~N~~G~~~S~~v~~~T~~~ 118 (127)
T 2dmk_A 81 HYTVHGLQSGTRYIFIVKAINQAGSRNSEPTRLKTNSQ 118 (127)
T ss_dssp EEEEESCCSSCEEEEEEEEEESSCEEECCCEEEECCSS
T ss_pred eEEECCCCCCCEEEEEEEEEeCCCCCCCcCeEeEeCCC
Confidence 45788999999999999543322 3566788888754
|
| >2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.94 E-value=0.12 Score=41.23 Aligned_cols=89 Identities=17% Similarity=0.151 Sum_probs=50.3
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
..|..+++.-.. .+++.|+|.-... ...=.|+|............ .. . ....
T Consensus 10 ~~P~~l~~~~~~-~~sv~lsW~~p~~------------~~~Y~v~y~~~~~~~~~~~~--~~---~----------~~~~ 61 (104)
T 2dkm_A 10 PPPRALTLAAVT-PRTVHLTWQPSAG------------ATHYLVRCSPASPKGEEEER--EV---Q----------VGRP 61 (104)
T ss_dssp CCCCCCEEEEEC-SSEEEEECCCCSS------------CSEEEEEEEESSSCCSSCCE--EE---E----------ESSS
T ss_pred CCCceeEEEecC-CCEEEEEEeCCCC------------CCeEEEEEEECCCCCCcceE--EE---e----------cCCC
Confidence 457888776544 5899999954321 12345666554321110000 00 0 0112
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCcCc--eEEEEcCCCC
Q 039280 128 IHHVLITGLQPNTLYEYECGDPSISAMSS--SHYFRTMPVS 166 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~~~~~s~--~~~F~T~p~~ 166 (487)
.++|+||+|+|.|.++|......+.|. ...++|.|..
T Consensus 62 --~~~l~~L~p~t~Y~~~V~A~~~~~~s~p~~~~~~T~p~~ 100 (104)
T 2dkm_A 62 --EVLLDGLEPGRDYEVSVQSLRGPEGSEARGIRARTPTSG 100 (104)
T ss_dssp --EEEEESCCTTCCEEEEEEEECSSSBCCCEEEECCCCCCS
T ss_pred --EEEECCCCCCCEEEEEEEEECCCCCCCCEEEEEEcCCCC
Confidence 788999999999999997543233333 3456776554
|
| >1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.89 E-value=0.21 Score=41.19 Aligned_cols=96 Identities=15% Similarity=0.053 Sum_probs=52.9
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEecc---CCCCceEEEEEEEEeeeecCCCCCCcc
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVF---RSSLTYQAEGYSLVYNQLYPPDGLQNY 123 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~---~~~~~~~~~g~~~~~~~~~~~~g~~~~ 123 (487)
+..|..+.+.-.. .+++.|+|.-... -+.. ...=.|+|... ....+..+... . .
T Consensus 18 P~~P~~l~~~~~~-~~sv~l~W~p~~~-~~~~-------i~~Y~v~~~~~~~~~~~~w~~~~~~------~--~------ 74 (124)
T 1wis_A 18 PGPPTNLGISNIG-PRSVTLQFRPGYD-GKTS-------ISRWLVEAQVGVVGEGEEWLLIHQL------S--N------ 74 (124)
T ss_dssp CCCCEEEEEESCC-SSCEEEEEECCCC-CSSC-------CSEEEEEECBSCCSTTSCCEEEEEE------E--S------
T ss_pred CccCCCCEEEEec-CCEEEEEEECCCC-CCCc-------ccEEEEEEEECCCCCCCCCeEeeeE------c--c------
Confidence 4568888775433 6899999954321 1110 12346777662 22222221100 0 0
Q ss_pred ccCcEEEEEeCCCCCCCEEEEEEecCCCC---CcCce-EEEEcCCCC
Q 039280 124 TSGIIHHVLITGLQPNTLYEYECGDPSIS---AMSSS-HYFRTMPVS 166 (487)
Q Consensus 124 ~~~~~h~v~l~gL~P~T~Y~Y~vg~~~~~---~~s~~-~~F~T~p~~ 166 (487)
......++|++|+|+|.|.+||...+.. .+|.. ..++|.+..
T Consensus 75 -~~~~~~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~~T~~~~ 120 (124)
T 1wis_A 75 -EPDARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQSG 120 (124)
T ss_dssp -CTTCSEEEECSCCTTSEECCCCEEECSSCBCCCCCCCCCEECCCSS
T ss_pred -CCCceEEEeCCCCCCCEEEEEEEEEECCccCCCcCCccceEcCCCC
Confidence 0112367889999999999999654432 33432 457776554
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.85 E-value=0.31 Score=42.73 Aligned_cols=78 Identities=15% Similarity=0.074 Sum_probs=45.9
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
+..|..+++.-.. .+++.|+|......-+. ....=.|+|...............
T Consensus 6 P~~P~~l~~~~~~-~~sv~l~W~~p~~~~~~-------~i~~Y~v~~~~~~~~~~~~~~~~~------------------ 59 (197)
T 3lpw_A 6 PGPPQDLKVKEVT-KTSVTLTWDPPLLDGGS-------KIKNYIVEKRESTRKAYSTVATNC------------------ 59 (197)
T ss_dssp CCCCEEEEEEEEC-SSCEEEEEECCSCCTTS-------CCCEEEEEEEETTCSSCEEEEEEE------------------
T ss_pred CCCCCCcEEEEec-CCEEEEEEcCCccCCCC-------cccEEEEEEEECCCCccEEeecCC------------------
Confidence 3468888776433 57999999875321110 012345667665443332221100
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPS 150 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~ 150 (487)
.....+|++|+|+|.|.|+|....
T Consensus 60 ~~~~~~~~~L~p~t~Y~~~V~a~~ 83 (197)
T 3lpw_A 60 HKTSWKVDQLQEGCSYYFRVLAEN 83 (197)
T ss_dssp CSSEEEECCCCTTCEEEEEEEEEE
T ss_pred CccEEEEcCCCCCCEEEEEEEEEc
Confidence 113578899999999999995433
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=94.84 E-value=0.37 Score=43.19 Aligned_cols=95 Identities=22% Similarity=0.268 Sum_probs=53.2
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
..|..+++.-.. .++++|+|.-.....+... .....=.|+|............ . ..-
T Consensus 6 ~~P~~l~~~~~~-~~si~l~W~~p~~~~~~~~----~~i~~Y~v~~~~~~~~~~~~~~-----~-------------~~~ 62 (211)
T 3p4l_A 6 MPPVGVQASILS-HDTIRITWADNSLPKHQKI----TDSRYYTVRWKTNIPANTKYKN-----A-------------NAT 62 (211)
T ss_dssp CCCEEEEEEECS-SSCEEEEEECTTSCTTCCC----CSSCEEEEEEEECC---CCCEE-----E-------------EES
T ss_pred CCCCCEEEEecC-CCeEEEEEeCCCCCccccc----CCCcEEEEEEEECCCCcceEEE-----e-------------CCC
Confidence 468888876544 6899999986431100000 0012345666554321111100 0 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCcCceEEEEcCCC
Q 039280 128 IHHVLITGLQPNTLYEYECGDPSI---SAMSSSHYFRTMPV 165 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~~---~~~s~~~~F~T~p~ 165 (487)
...++|++|+|+|.|.++|..-.. ..+|....++|.+.
T Consensus 63 ~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~S~~~~~~t~~~ 103 (211)
T 3p4l_A 63 TLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 103 (211)
T ss_dssp SSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred ceEEEecCcCCCCEEEEEEEEEcCCCCCccceeEeeecccC
Confidence 236789999999999999954322 25677888998654
|
| >2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.83 E-value=0.065 Score=43.44 Aligned_cols=38 Identities=24% Similarity=0.227 Sum_probs=28.9
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCcCceEEEEcCCCCC
Q 039280 130 HVLITGLQPNTLYEYECGDPSI---SAMSSSHYFRTMPVSG 167 (487)
Q Consensus 130 ~v~l~gL~P~T~Y~Y~vg~~~~---~~~s~~~~F~T~p~~~ 167 (487)
..+|++|+|+|.|.|||...+. ..+|+...|+|.+.+.
T Consensus 66 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~p~ 106 (110)
T 2db8_A 66 MCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEGSG 106 (110)
T ss_dssp CEEEECCCSSSCCEEEEEEECSSCBCCCCSCEECCCCCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCcCCCCCCCEEEEcCCCCC
Confidence 4578899999999999954332 2577888999987653
|
| >1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.75 E-value=0.18 Score=38.77 Aligned_cols=67 Identities=18% Similarity=0.340 Sum_probs=39.4
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
+..|..+++.-.. .+++.++|..... ......|....+. . .. +. . ..
T Consensus 4 P~~P~~l~~~~~~-~~sv~L~W~~~~~-------------~~~i~~Y~v~~~~-~-~~-~~------~----------~~ 50 (88)
T 1k85_A 4 PTAPTNLASTAQT-TSSITLSWTASTD-------------NVGVTGYDVYNGT-A-LA-TT------V----------TG 50 (88)
T ss_dssp CCCCEEEEEEEEC-SSCEEEEEECCSC-------------CSSEEEEEEEESS-S-EE-EE------E----------SS
T ss_pred cCCCCccEEEecc-CCEEEEEECCCCC-------------CCCccEEEEEECC-E-EE-ee------c----------CC
Confidence 3468887776544 6799999976532 1124444432111 0 10 00 0 01
Q ss_pred cEEEEEeCCCCCCCEEEEEEec
Q 039280 127 IIHHVLITGLQPNTLYEYECGD 148 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~ 148 (487)
-...+++|+|++.|+|+|..
T Consensus 51 --~~~~~~~L~~~t~Y~~~V~A 70 (88)
T 1k85_A 51 --TTATISGLAADTSYTFTVKA 70 (88)
T ss_dssp --SEEEECCCCSSCEEEEEEEE
T ss_pred --CEEEeCCCCCCCEEEEEEEE
Confidence 14568999999999999964
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=94.72 E-value=0.13 Score=45.27 Aligned_cols=88 Identities=16% Similarity=0.066 Sum_probs=48.7
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
..|..+++.-. ..+++.|+|.-.... ...=.|+|........... ... +-
T Consensus 96 ~~P~~l~~~~~-~~~sv~l~W~~p~~~-----------i~~Y~v~~~~~~~~~~~~~-----~~~-------------~~ 145 (186)
T 1qr4_A 96 GSPKGISFSDI-TENSATVSWTPPRSR-----------VDSYRVSYVPITGGTPNVV-----TVD-------------GS 145 (186)
T ss_dssp CCCSCEEEESC-CSSCEEEEECCCSSC-----------CSEEEEEEEETTCCCCEEE-----EEE-------------TT
T ss_pred CCCCccEEEEe-CCCEEEEEEECCCCc-----------ccEEEEEEEeCCCCCceEE-----EcC-------------CC
Confidence 45777766533 358999999654210 1234566765443211111 010 11
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCcCc--eEEEEcCCC
Q 039280 128 IHHVLITGLQPNTLYEYECGDPSISAMSS--SHYFRTMPV 165 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~~~~~s~--~~~F~T~p~ 165 (487)
...++|+||+|+|.|.++|......+.|+ ...|+|.|.
T Consensus 146 ~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~~~~~~T~pd 185 (186)
T 1qr4_A 146 KTRTKLVKLVPGVDYNVNIISVKGFEESEPISGILKTALD 185 (186)
T ss_dssp CCEEEECSCCSSCEEEEEEEEEETTEECCCEEEEEEC---
T ss_pred cCEEEEcCCCCCCEEEEEEEEEcCCCcCcCEEEEEEecCC
Confidence 24678999999999999996543334443 456777663
|
| >3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic} | Back alignment and structure |
|---|
Probab=94.70 E-value=0.2 Score=39.61 Aligned_cols=79 Identities=19% Similarity=0.227 Sum_probs=45.6
Q ss_pred CCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCC-CCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 49 QPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRS-SLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 49 ~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~-~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
.|..++++-- ..+++.|+|...... ...=.|+|..... ...... ... + -
T Consensus 4 ~P~~l~v~~~-t~~Sv~lsW~~p~~~-----------i~~Y~v~y~~~~~~~~~~~~-----~~~------~-------~ 53 (98)
T 3tes_A 4 APKNLVVSEV-TEDSLRLSWTAPDAA-----------FDSFMIQYQESEKVGEAINL-----TVP------G-------S 53 (98)
T ss_dssp CCEEEEEESC-CSSCEEEEEECCTTS-----------CSEEEEEEEETTBCSCCEEE-----EEE------T-------T
T ss_pred CCCceEEEec-CCCeEEEEecCCcCc-----------cceEEEEEEECCCCCceEEE-----EcC------C-------C
Confidence 3777777533 368999999765321 1234577776532 111110 010 1 1
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCcCce
Q 039280 128 IHHVLITGLQPNTLYEYECGDPSISAMSSS 157 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~~~~~s~~ 157 (487)
.-.++|+||+|+|.|.++|......+.|+.
T Consensus 54 ~t~~~l~gL~P~t~Y~~~V~A~~~~g~S~p 83 (98)
T 3tes_A 54 ERSYDLTGLKPGTEYTVSIYGVKGGHRSNP 83 (98)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEETTEEBCC
T ss_pred cCEEEECCCCCCCEEEEEEEEEeCCcccCC
Confidence 236889999999999999965443344433
|
| >1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.63 E-value=0.16 Score=41.21 Aligned_cols=98 Identities=12% Similarity=0.113 Sum_probs=55.7
Q ss_pred CCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCcE
Q 039280 49 QPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGII 128 (487)
Q Consensus 49 ~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~ 128 (487)
.|..+++.-.. .+++.|+|......... + ....=.|+|.......... +... . ....+-.
T Consensus 18 ~P~~~~~~~~~-~~sv~l~W~~p~~~~~~-----g-~i~~Y~v~~~~~~~~~~~~-------~~~~---~---~~~~~~~ 77 (122)
T 1va9_A 18 PPMDVTLQPVT-SQSIQVTWKAPKKELQN-----G-VIRGYQIGYRENSPGSNGQ-------YSIV---E---MKATGDS 77 (122)
T ss_dssp CCEEEEEEECS-SSEEEEEEECCCSSTTC-----S-CCCEEEEEEEESSTTSCCS-------CBCC---B---CCCCSSE
T ss_pred CCcceEEEecc-CCEEEEEEeCCCCcCCC-----C-cEeEEEEEEEECCCCCCcc-------eEEE---E---EecCCce
Confidence 58888875543 68999999876531000 0 0123345665543211100 0000 0 0011235
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCcCceEEEEcCCCC
Q 039280 129 HHVLITGLQPNTLYEYECGDPSI---SAMSSSHYFRTMPVS 166 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~~~---~~~s~~~~F~T~p~~ 166 (487)
..++|++|+|+|.|.+||..-+. ..+|....|+|....
T Consensus 78 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 118 (122)
T 1va9_A 78 EVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLESG 118 (122)
T ss_dssp EEEEEESCCSSCCEEEEEEEEETTEECCCCCCEECCCCSSC
T ss_pred eEEEeCCCCCCCEEEEEEEEEcCCCCCCCccCEEEEeCCCC
Confidence 67889999999999999954322 257788888887643
|
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* | Back alignment and structure |
|---|
Probab=94.62 E-value=0.017 Score=56.23 Aligned_cols=22 Identities=14% Similarity=0.187 Sum_probs=19.1
Q ss_pred HHHHHHHHHHcCCcEEEeCccc
Q 039280 363 RVEMEDLLYYYGVDIVFNGHVH 384 (487)
Q Consensus 363 r~~l~~l~~~~~VdlvlsGH~H 384 (487)
.+.+.+.++++++++++=||.=
T Consensus 228 ~~~~~~fl~~n~l~~IiR~Hq~ 249 (299)
T 3e7a_A 228 AEVVAKFLHKHDLDLICRAHQV 249 (299)
T ss_dssp HHHHHHHHHHHTCSEEEECCSC
T ss_pred HHHHHHHHHHCCCeEEEEcCee
Confidence 3677889999999999999984
|
| >3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C | Back alignment and structure |
|---|
Probab=94.61 E-value=0.29 Score=38.93 Aligned_cols=92 Identities=18% Similarity=0.205 Sum_probs=51.0
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCC--ceEEEEEEEEeeeecCCCCCCccc
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSL--TYQAEGYSLVYNQLYPPDGLQNYT 124 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~--~~~~~g~~~~~~~~~~~~g~~~~~ 124 (487)
...|..+.+.-.. .+++.|+|.-....... .....=.|.|....... ... ..... +
T Consensus 5 ~~~P~~~~~~~~s-~tsi~v~W~~p~~~~~n------g~i~gY~v~y~~~~~~~~~~~~----~~~v~------~----- 62 (102)
T 3n1f_C 5 ITGPHIAYTEAVS-DTQIMLKWTYIPSSNNN------TPIQGFYIYYRPTDSDNDSDYK----RDVVE------G----- 62 (102)
T ss_dssp CSCCEEEEEEECS-SSCEEEEEECCC-----------CCCCEEEEEEEETTCCCGGGCE----EEEEE------T-----
T ss_pred CCCCceeEEEEcC-CCEEEEEeECCChhhcC------CccceEEEEEEECCCCCCCceE----EEEEc------C-----
Confidence 3468888875544 68999999765421000 00112357777654321 111 01111 1
Q ss_pred cCcEEEEEeCCCCCCCEEEEEEecCC---CCCcCceEEEEc
Q 039280 125 SGIIHHVLITGLQPNTLYEYECGDPS---ISAMSSSHYFRT 162 (487)
Q Consensus 125 ~~~~h~v~l~gL~P~T~Y~Y~vg~~~---~~~~s~~~~F~T 162 (487)
-..+++|++|+|+|.|..+|..-+ .+..|....++|
T Consensus 63 --~~~~~~l~~L~p~t~Y~v~V~A~n~~G~G~~S~~~~~~T 101 (102)
T 3n1f_C 63 --SKQWHMIGHLQPETSYDIKMQCFNEGGESEFSNVMICET 101 (102)
T ss_dssp --TCSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEEC
T ss_pred --CceEEECCCCCCCCEEEEEEEEECCCcCCCCCCCEEeec
Confidence 112468999999999999995322 125666777776
|
| >2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.58 E-value=0.099 Score=42.85 Aligned_cols=83 Identities=11% Similarity=0.008 Sum_probs=47.7
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
+..|..+++.-.. .+++.|+|.-....-+.. ...=.|+|.......+..+.. ..
T Consensus 18 P~~P~~l~~~~~~-~~sv~l~W~~p~~~gg~~-------i~~Y~v~~~~~~~~~w~~~~~-----------~~------- 71 (120)
T 2yux_A 18 PGPPQIVKIEDVW-GENVALTWTPPKDDGNAA-------ITGYTIQKADKKSMEWFTVIE-----------HY------- 71 (120)
T ss_dssp CCCCSCEEEEEEE-TTEEEEEECCCSCCCSSC-------CCCCCEEEEETTTCCCEEEES-----------SC-------
T ss_pred CCcCCCCEEEEec-CCEEEEEEcCCCcCCCCC-------ceEEEEEEEECCCCceEEeee-----------cC-------
Confidence 3468887775433 579999997654211110 123457777654433322210 00
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCCCCCcC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPSISAMS 155 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~~~~~s 155 (487)
....++|++|+|++.|.|||...+..+.+
T Consensus 72 ~~~~~~v~~L~p~t~Y~frV~A~n~~G~s 100 (120)
T 2yux_A 72 HRTSATITELVIGNEYYFRVFSENMCGLS 100 (120)
T ss_dssp CSSCCEECCCCSSEEEEEEECCCSSSCSC
T ss_pred CcCEEEECCCCCCCEEEEEEEEeeCCcCC
Confidence 11245789999999999999765533444
|
| >2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.53 E-value=0.16 Score=41.64 Aligned_cols=91 Identities=19% Similarity=0.160 Sum_probs=51.4
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCC-------CceEEEEEEEEeeeecCCCCC
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSS-------LTYQAEGYSLVYNQLYPPDGL 120 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~-------~~~~~~g~~~~~~~~~~~~g~ 120 (487)
-.|.+++++-.. .++++|+|.-.... ...=.|+|....+. ..... ....
T Consensus 10 p~p~~L~v~~~T-~~Si~LsW~~p~g~-----------v~~Y~i~y~~~~~~~~e~~~~~~~~~---~~~v--------- 65 (112)
T 2cui_A 10 PRLSQLSVTDVT-TSSLRLNWEAPPGA-----------FDSFLLRFGVPSPSTLEPHPRPLLQR---ELMV--------- 65 (112)
T ss_dssp CCCCCCEEESCC-SSCEEEECCCCTTS-----------CSEEEEEEECCCCSSSCCCSSCCCCE---EEEE---------
T ss_pred CCCCceEEEeec-CCeEEEEECCCCCC-----------ccEEEEEEEeCCCCccccccccCcce---EEEc---------
Confidence 456777776544 68999999754311 12356778755321 00000 0000
Q ss_pred CccccCcEEEEEeCCCCCCCEEEEEEecCCCCCcCc--eEEEEcCCCC
Q 039280 121 QNYTSGIIHHVLITGLQPNTLYEYECGDPSISAMSS--SHYFRTMPVS 166 (487)
Q Consensus 121 ~~~~~~~~h~v~l~gL~P~T~Y~Y~vg~~~~~~~s~--~~~F~T~p~~ 166 (487)
++-...++|+||+|+|.|..+|........|. ....+|.+.+
T Consensus 66 ----~~~~t~~~l~gL~PgT~Y~~~V~A~~~~~~s~p~~~~~~T~~~~ 109 (112)
T 2cui_A 66 ----PGTRHSAVLRDLRSGTLYSLTLYGLRGPHKADSIQGTARTLSGP 109 (112)
T ss_dssp ----ETTCCEEEECSCCTTCEEEEEEEEECSSSEEEEEEEEEECCCCS
T ss_pred ----CCCcCEEEeCCCCCCCEEEEEEEEEECCcccCCEEEEEEECCCC
Confidence 11223789999999999999986543223332 4456676543
|
| >2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.52 E-value=0.28 Score=39.83 Aligned_cols=88 Identities=14% Similarity=-0.023 Sum_probs=50.6
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
..|..+++.--. .+++.|+|.-.... ...=.|+|....... ... .. .+-
T Consensus 9 ~~P~~l~~~~~t-~~sv~lsW~~p~~~-----------i~~Y~v~y~~~~~~~-~~~-----~v-------------~~~ 57 (115)
T 2cuh_A 9 DGPTQLRALNLT-EGFAVLHWKPPQNP-----------VDTYDIQVTAPGAPP-LQA-----ET-------------PGS 57 (115)
T ss_dssp SSCEEEECCCCS-SSCEEEEEECCSSC-----------CSEEEEEEECSSSCC-EEE-----EE-------------ETT
T ss_pred CCCcceEEEecc-CCeEEEEEECCCCC-----------ccEEEEEEEcCCCCc-EEE-----EE-------------CCC
Confidence 457777765443 58999999654311 123456776543211 110 00 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCC--cCceEEEEcCCCC
Q 039280 128 IHHVLITGLQPNTLYEYECGDPSISA--MSSSHYFRTMPVS 166 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~~~~--~s~~~~F~T~p~~ 166 (487)
...++|++|+|+|.|.++|......+ ......|+|.+.+
T Consensus 58 ~t~~~l~~L~P~t~Y~~~V~A~~~~~~s~~~~~~~~T~~~~ 98 (115)
T 2cuh_A 58 AVDYPLHDLVLHTNYTATVRGLRGPNLTSPASITFTTGLEA 98 (115)
T ss_dssp CSEEEECSCCSSSEEEEEEEEEETTEECCCEEEEEESCCCC
T ss_pred ccEEEEeCCCCCCEEEEEEEEEeCCCcCCCEEEEEEeCCCC
Confidence 23678999999999999995432222 2235678887543
|
| >2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.52 E-value=0.47 Score=38.26 Aligned_cols=38 Identities=21% Similarity=0.095 Sum_probs=29.1
Q ss_pred EEEEeCCCCCCCEEEEEEecCC---CCCcCceEEEEcCCCC
Q 039280 129 HHVLITGLQPNTLYEYECGDPS---ISAMSSSHYFRTMPVS 166 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~~---~~~~s~~~~F~T~p~~ 166 (487)
..++|++|+|+|.|.+||...+ ...+|+...|+|.+..
T Consensus 76 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 116 (121)
T 2dlh_A 76 QITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTGS 116 (121)
T ss_dssp SEECCBSCCSSCEEEEEEEEEESSCBCCCCCCEEEECCCCC
T ss_pred eEEEecCCCCCCEEEEEEEEEeCCccCCCCCCEEEECCCCC
Confidence 4678999999999999995422 2357888899997653
|
| >2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.50 E-value=0.16 Score=40.62 Aligned_cols=79 Identities=14% Similarity=0.024 Sum_probs=42.9
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
+..|..+.+.-.. .+++.|+|.-....-+. ....=.|+|.......+..+. . . ..
T Consensus 8 P~~P~~l~~~~~~-~~sv~l~W~~p~~~g~~-------~i~~Y~v~~~~~~~~~w~~~~----------~-~------~~ 62 (110)
T 2yuw_A 8 TSPPTLLTVDSVT-DTTVTMRWRPPDHIGAA-------GLDGYVLEYCFEGTEDWIVAN----------K-D------LI 62 (110)
T ss_dssp SCCCEEEEEEEEC-SSCEEEEEECCSSCCSS-------CEEEEEEEEEETTCSSEEECC----------S-S------CC
T ss_pred CCCCCccEEEecc-CCeEEEEECCCCCCCCC-------CccEEEEEEEECCCccceEec----------c-c------cC
Confidence 3468887776333 57999999865421000 001123455444322111110 0 0 01
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPS 150 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~ 150 (487)
.....+|++|+|++.|.|||...+
T Consensus 63 ~~~~~~v~~L~p~t~Y~frV~A~n 86 (110)
T 2yuw_A 63 DKTKFTITGLPTDAKIFVRVKAVN 86 (110)
T ss_dssp CSSEEEECSCCTTCEEEEEEEEEE
T ss_pred ccCEEEECCCCCCCEEEEEEEEEc
Confidence 123577899999999999996544
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A | Back alignment and structure |
|---|
Probab=94.47 E-value=0.029 Score=54.92 Aligned_cols=23 Identities=13% Similarity=0.096 Sum_probs=19.6
Q ss_pred HHHHHHHHHHcCCcEEEeCcccc
Q 039280 363 RVEMEDLLYYYGVDIVFNGHVHA 385 (487)
Q Consensus 363 r~~l~~l~~~~~VdlvlsGH~H~ 385 (487)
.+...+.++++++++++=||.=.
T Consensus 233 ~~~~~~fl~~n~l~~iiR~Hq~~ 255 (315)
T 3h63_A 233 PDVTKAFLEENNLDYIIRSHEVK 255 (315)
T ss_dssp HHHHHHHHHHHTCSEEEECCSCC
T ss_pred HHHHHHHHHHcCCcEEEEeceee
Confidence 35677889999999999999864
|
| >1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.46 E-value=0.15 Score=42.16 Aligned_cols=38 Identities=21% Similarity=0.237 Sum_probs=29.5
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCC---CcCceEEEEcCCC
Q 039280 128 IHHVLITGLQPNTLYEYECGDPSIS---AMSSSHYFRTMPV 165 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~~~---~~s~~~~F~T~p~ 165 (487)
...++|++|+|+|.|.+||...... .+|....|+|.+.
T Consensus 76 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 116 (132)
T 1x5h_A 76 QLSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFES 116 (132)
T ss_dssp CCEEEEECCCSSCEEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred ccEEEeCCCCCCCEEEEEEEEEcCCccCCCCcCEEeEcCcc
Confidence 3567899999999999999653322 5788889999764
|
| >2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.45 E-value=0.34 Score=38.71 Aligned_cols=87 Identities=16% Similarity=0.157 Sum_probs=51.0
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
..|..+++.--. .+++.|+|.-.... ...=.|+|...... .... .. . +-
T Consensus 9 ~~P~~l~v~~~~-~~sv~lsW~~p~~~-----------i~~Y~i~y~~~~~~-~~~~-----~~------~-------~~ 57 (105)
T 2cum_A 9 EAPRDLEAKEVT-PRTALLTWTEPPVR-----------PAGYLLSFHTPGGQ-TQEI-----LL------P-------GG 57 (105)
T ss_dssp CCCEEEEEESCC-SSCEEEEEECCSSC-----------CSEEEEEEECTTSC-EEEE-----EE------C-------SS
T ss_pred CCCCceEEEecc-CCEEEEEEcCCCCc-----------cceEEEEEEeCCCc-eEEE-----EE------C-------CC
Confidence 457888776544 67999999654311 12335677654321 1110 00 0 11
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCcC--ceEEEEcCCC
Q 039280 128 IHHVLITGLQPNTLYEYECGDPSISAMS--SSHYFRTMPV 165 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~~~~~s--~~~~F~T~p~ 165 (487)
...++|+||+|+|.|.++|..-...+.| ....|+|...
T Consensus 58 ~ts~~l~~L~p~t~Y~~~V~A~~~~g~s~~~~~~~~T~~~ 97 (105)
T 2cum_A 58 ITSHQLLGLFPSTSYNARLQAMWGQSLLPPVSTSFTTGGL 97 (105)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEBTTBCCCCEEEEEECCCS
T ss_pred ccEEEECCCCCCCEEEEEEEEEeCCcccCCEEEEEEeCCc
Confidence 2368899999999999999653322333 3567888644
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A | Back alignment and structure |
|---|
Probab=94.44 E-value=0.019 Score=57.12 Aligned_cols=23 Identities=9% Similarity=0.057 Sum_probs=19.2
Q ss_pred HHHHHHHHHHcCCcEEEeCcccc
Q 039280 363 RVEMEDLLYYYGVDIVFNGHVHA 385 (487)
Q Consensus 363 r~~l~~l~~~~~VdlvlsGH~H~ 385 (487)
.+...+.++++++++++=||.=.
T Consensus 249 ~~~~~~Fl~~n~l~~IiRaHq~~ 271 (357)
T 3ll8_A 249 YPAVCEFLQHNNLLSILRAHEAQ 271 (357)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCC
T ss_pred hHHHHHHHHHCCCeEEEEecccc
Confidence 35677889999999999999754
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=94.42 E-value=0.4 Score=43.92 Aligned_cols=89 Identities=16% Similarity=0.090 Sum_probs=54.5
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
...|..+.+.-.. .+++.|+|.-.... ...=.|+|....+....... .. .
T Consensus 6 ~~~P~~l~~~~~~-~~si~l~W~~p~g~-----------i~~Y~v~~~~~~~~~~~~~~-----~~-------------~ 55 (234)
T 3f7q_A 6 LGAPQNPNAKAAG-SRKIHFNWLPPSGK-----------PMGYRVKYWIQGDSESEAHL-----LD-------------S 55 (234)
T ss_dssp CCCCEEEEEEECS-SSCEEEEEECCSSC-----------CCEEEEEEEETTSCGGGCEE-----EE-------------E
T ss_pred CCCCcceEEEEcC-CCEEEEEEECCCCc-----------cceEEEEEEECCCCccceEE-----Ec-------------C
Confidence 4568888886544 67999999765210 12345677655432221110 00 0
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCCC---CCcCceEEEEcCCC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPSI---SAMSSSHYFRTMPV 165 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~~---~~~s~~~~F~T~p~ 165 (487)
....++|++|+|+|.|.++|..-.. ..+|....|+|...
T Consensus 56 ~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~~~~T~~~ 97 (234)
T 3f7q_A 56 KVPSVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQE 97 (234)
T ss_dssp SSSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred CccEEEECCCCCCCEEEEEEEEEeCCCcCCCCCeEEEEcCCC
Confidence 1236788999999999999954321 24667788888754
|
| >1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.38 E-value=0.24 Score=39.97 Aligned_cols=93 Identities=20% Similarity=0.116 Sum_probs=49.4
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCC-CceEEEEEEEEeeeecCCCCCCcccc
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSS-LTYQAEGYSLVYNQLYPPDGLQNYTS 125 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~-~~~~~~g~~~~~~~~~~~~g~~~~~~ 125 (487)
+..|.++++.-. ..+++.|+|.-.... +. ....=.|+|...... .+..+. ...
T Consensus 16 P~~P~~~~~~~~-~~~sv~l~W~~p~~~-~~-------~i~~Y~v~~~~~~~~~~~~~~~------~~~----------- 69 (117)
T 1uem_A 16 PGPPSKPQVTDV-TKNSVTLSWQPGTPG-TL-------PASAYIIEAFSQSVSNSWQTVA------NHV----------- 69 (117)
T ss_dssp CBCCCCCEEEEE-CSSCEEEECCCCBCS-SS-------CCCEEEEEEEETTTEEEEEEEE------EEE-----------
T ss_pred ccCCCCCEEEEe-cCCEEEEEEeCCCCC-Cc-------CceEEEEEEEECCCCCceeEcc------ccc-----------
Confidence 445777777633 367999999765411 10 011234566544211 111110 000
Q ss_pred CcEEEEEeCCCCCCCEEEEEEecCCCC---CcCceEE-EEcCCCC
Q 039280 126 GIIHHVLITGLQPNTLYEYECGDPSIS---AMSSSHY-FRTMPVS 166 (487)
Q Consensus 126 ~~~h~v~l~gL~P~T~Y~Y~vg~~~~~---~~s~~~~-F~T~p~~ 166 (487)
....++|++|+|+|.|.|||...+.. .+|..-. ++|.+.+
T Consensus 70 -~~~~~~i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~v~t~~~~ 113 (117)
T 1uem_A 70 -KTTLYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDSG 113 (117)
T ss_dssp -CSSEEEECSCCTTCEEEEEEEEEETTEEEEECCCCCCEECCCSS
T ss_pred -CcCEEEECCCCCCCEEEEEEEEECCCccCCCcCCCccEEccCCC
Confidence 11256889999999999999654322 2344333 6666543
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=94.30 E-value=0.047 Score=56.66 Aligned_cols=24 Identities=17% Similarity=0.124 Sum_probs=20.3
Q ss_pred HHHHHHHHHcCCcEEEeCccccce
Q 039280 364 VEMEDLLYYYGVDIVFNGHVHAYE 387 (487)
Q Consensus 364 ~~l~~l~~~~~VdlvlsGH~H~ye 387 (487)
+.+...++++++++++.||.+..+
T Consensus 387 ~~~~~fl~~~~~~~iir~H~~~~~ 410 (477)
T 1wao_1 387 DVTKAFLEENNLDYIIRSHEVKAE 410 (477)
T ss_dssp HHHHHHHHHTTCCEEEECCSCCTE
T ss_pred HHHHHHHHHcCCeEEEECCCCCcC
Confidence 457788899999999999999744
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=94.22 E-value=0.04 Score=54.38 Aligned_cols=23 Identities=13% Similarity=0.109 Sum_probs=19.7
Q ss_pred HHHHHHHHHHcCCcEEEeCcccc
Q 039280 363 RVEMEDLLYYYGVDIVFNGHVHA 385 (487)
Q Consensus 363 r~~l~~l~~~~~VdlvlsGH~H~ 385 (487)
.+.....++++++++++=||.=.
T Consensus 237 ~~~~~~fl~~n~l~~IiR~Hq~~ 259 (335)
T 3icf_A 237 PDITDRFLRNNKLRKIFRSHELR 259 (335)
T ss_dssp HHHHHHHHHHTTCSEEEECSSCC
T ss_pred HHHHHHHHHHCCCeEEEEcCcee
Confidence 35678899999999999999864
|
| >3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D* | Back alignment and structure |
|---|
Probab=94.02 E-value=0.33 Score=39.68 Aligned_cols=74 Identities=20% Similarity=0.247 Sum_probs=44.3
Q ss_pred CCCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCcccc
Q 039280 46 EGFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTS 125 (487)
Q Consensus 46 ~~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~ 125 (487)
.+..|..+++.-.. .+++.|+|...... ...=.|+|....+..... .... .
T Consensus 3 vP~~P~~L~v~~~t-~~Sv~lsW~~p~g~-----------i~~Y~v~y~~~~~~~~~~----~~~v-------------~ 53 (114)
T 3qwq_B 3 VSDVPRDLEVVAAT-PTSLLISWDSGRGS-----------YQYYRITYGETGGNSPVQ----EFTV-------------P 53 (114)
T ss_dssp --CCCEEEEEEEEE-TTEEEEEEECCSCC-----------CSEEEEEEEESSCSSCCE----EEEE-------------E
T ss_pred CCCCCCceEEEecC-CCEEEEEEcCCcCc-----------ccEEEEEEEECCCCCccE----EEEe-------------C
Confidence 34568888886544 68999999864311 123457776654321111 0001 0
Q ss_pred CcEEEEEeCCCCCCCEEEEEEec
Q 039280 126 GIIHHVLITGLQPNTLYEYECGD 148 (487)
Q Consensus 126 ~~~h~v~l~gL~P~T~Y~Y~vg~ 148 (487)
+-...++|+||+|+|.|..+|..
T Consensus 54 ~~~ts~~l~gL~P~T~Y~v~V~A 76 (114)
T 3qwq_B 54 GPVHTATISGLKPGVDYTITVYA 76 (114)
T ss_dssp TTCCEEEECSCCTTCEEEEEEEE
T ss_pred CCcCEEEeCCCCCCCEEEEEEEE
Confidence 11236889999999999999853
|
| >1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.01 E-value=0.19 Score=40.31 Aligned_cols=79 Identities=10% Similarity=0.003 Sum_probs=44.1
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
+..|..+++.-.. .+++.|+|.-....-+. ....=.|+|.......+..+ . . ...
T Consensus 9 P~~P~~l~~~~~~-~~sv~l~W~~p~~~~~~-------~i~~Y~v~~~~~~~~~w~~~-------~---~-------~~~ 63 (111)
T 1x5y_A 9 TSAPQHLTVEDVT-DTTTTLKWRPPDRIGAG-------GIDGYLVEYCLEGSEEWVPA-------N---K-------EPV 63 (111)
T ss_dssp CCCCEEEEEEEEC-SSEEEEEEECCSCCCSS-------CCCEEEEEEEETTCCCCEES-------S---S-------SCB
T ss_pred CcCCCCCEEEecc-CCEEEEEECCCCcCCCC-------cccEEEEEEEECCCCceEEc-------c---c-------cCC
Confidence 3568887776543 57999999865421110 01223456654433221110 0 0 001
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPS 150 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~ 150 (487)
....++|++|+|+|.|.|||...+
T Consensus 64 ~~~~~~v~~L~p~t~Y~frV~A~n 87 (111)
T 1x5y_A 64 ERCGFTVKDLPTGARILFRVVGVN 87 (111)
T ss_dssp SSSEEEEECCCTTCCEEEEEEEEE
T ss_pred cccEEEECCCCCCCEEEEEEEEEc
Confidence 123577899999999999996543
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=93.93 E-value=0.28 Score=43.96 Aligned_cols=96 Identities=19% Similarity=0.190 Sum_probs=55.6
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
+..|..+.+..... ++.|+|.-....-|.. ...=.|+|.......+.... +... ..+
T Consensus 9 P~~P~~~~~~~~~~--s~~l~W~~p~~~~g~~-------i~~Y~v~~~~~~~~~~~~~~-----~~~~---------~~~ 65 (209)
T 2vkw_A 9 PSSPSIDQVEPYSS--TAQVQFDEPEATGGVP-------ILKYKAEWRAVGEEVWHSKW-----YDAK---------EAS 65 (209)
T ss_dssp CCCCEEEEEEECSS--CEEEEEECCSCCCSSC-------CCEEEEEEEESSCCCCEEEE-----EEHH---------HHH
T ss_pred CcCCcccEeeeccC--eEEEEEcCCCcCCCcc-------eeEEEEEEeeCCCCCceEeE-----eecc---------CCC
Confidence 45688888876653 6999998753211110 12345677655433222211 0000 001
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCCC---CCcCceEEEEcCCC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPSI---SAMSSSHYFRTMPV 165 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~~---~~~s~~~~F~T~p~ 165 (487)
.....+|++|+|+|.|.|||..... ..+|....|+|.+.
T Consensus 66 ~~~~~~i~~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~T~~~ 107 (209)
T 2vkw_A 66 MEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPV 107 (209)
T ss_dssp HHSEEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEECCCS
T ss_pred ccceEEeCCCCCCCeEEEEEEEEcCCcccCCcccccccccCC
Confidence 1236788999999999999954321 24667778888764
|
| >1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.87 E-value=0.57 Score=36.16 Aligned_cols=86 Identities=17% Similarity=0.235 Sum_probs=48.2
Q ss_pred CCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCcE
Q 039280 49 QPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGII 128 (487)
Q Consensus 49 ~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~ 128 (487)
.|..+++.--. .+++.|+|.-.. +. ...=.|+|....+. ..... ... .+-.
T Consensus 4 ~P~~l~~~~~~-~~si~lsW~~p~---~~--------i~~Y~v~y~~~~~~-------~~~~~----~~~------~~~~ 54 (94)
T 1j8k_A 4 RPKGLAFTDVD-VDSIKIAWESPQ---GQ--------VSRYRVTYSSPEDG-------IHELF----PAP------DGEE 54 (94)
T ss_dssp CCCCCEEEEEE-TTEEEEECCCCS---SC--------CSCEEEEEEETTTE-------EEEEC----CCC------CSSC
T ss_pred CCCccEEEeec-CCEEEEEEcCCC---CC--------cceEEEEEEeCCCC-------CceEE----ecC------CCCc
Confidence 47777776544 589999995432 10 12345667654321 00000 000 1123
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCcCc--eEEEEcC
Q 039280 129 HHVLITGLQPNTLYEYECGDPSISAMSS--SHYFRTM 163 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~~~~~~s~--~~~F~T~ 163 (487)
..++|+||+|+|.|.++|..-...+.|. ...++|.
T Consensus 55 ~~~~l~~L~p~t~Y~~~V~A~~~~g~s~p~~~~~~T~ 91 (94)
T 1j8k_A 55 DTAELQGLRPGSEYTVSVVALHDDMESQPLIGTQSTA 91 (94)
T ss_dssp CEEEECSCCCCSEEEEEEEECSSSCCCCCEEEEEECC
T ss_pred cEEEeCCCCCCCEEEEEEEEEcCCCcCCCEEeEEEec
Confidence 4788999999999999997654333333 3345554
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=93.80 E-value=0.36 Score=42.34 Aligned_cols=89 Identities=12% Similarity=0.014 Sum_probs=52.3
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
...|..+++.-.. .+++.|+|.-.... ...=.|+|....+. ... ... .+
T Consensus 7 p~~P~~l~~~~~~-~~sv~l~W~~p~~~-----------i~~Y~v~~~~~~~~-~~~-----~~~------~~------- 55 (186)
T 1qr4_A 7 LDNPKDLEVSDPT-ETTLSLRWRRPVAK-----------FDRYRLTYVSPSGK-KNE-----MEI------PV------- 55 (186)
T ss_dssp -CCCEEEEEESCC-SSEEEEEEECCSSC-----------CSEEEEEEECTTCC-EEE-----EEE------CT-------
T ss_pred CcCCCceEEEecC-CCEEEEEEeCCCCC-----------ccEEEEEEEeCCCC-eeE-----EEC------CC-------
Confidence 3568888876544 67999999764321 12345677643221 111 101 01
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCCCCCcCc--eEEEEcCCCC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPSISAMSS--SHYFRTMPVS 166 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~~~~~s~--~~~F~T~p~~ 166 (487)
-...++|++|+|+|.|.++|......+.|. ...++|.|.+
T Consensus 56 ~~~~~~i~~L~p~t~Y~~~V~a~~~~~~s~~~~~~~~t~p~~ 97 (186)
T 1qr4_A 56 DSTSFILRGLDAGTEYTISLVAEKGRHKSKPTTIKGSTVVGS 97 (186)
T ss_dssp TCSEEEEESCCSSCEEEEEEEEESSSCBCCCEEEEEECCCCC
T ss_pred CCCEEEECCCCCCCEEEEEEEEEcCCccCCCEEEEEECCCCC
Confidence 123567899999999999996544334443 4567777654
|
| >1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.73 E-value=0.18 Score=41.12 Aligned_cols=38 Identities=24% Similarity=0.284 Sum_probs=28.8
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCcCceEEEEcCCCC
Q 039280 129 HHVLITGLQPNTLYEYECGDPSI---SAMSSSHYFRTMPVS 166 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~~~---~~~s~~~~F~T~p~~ 166 (487)
..++|++|+|+|.|.+||..-+. ..+|....|+|.+..
T Consensus 80 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 120 (125)
T 1uen_A 80 THGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGS 120 (125)
T ss_dssp SEEEEESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCCC
T ss_pred cEEEeCCCCCCCEEEEEEEEecCCCCCCCCCCEEEECCCCC
Confidence 46789999999999999954322 256778889997653
|
| >3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=93.57 E-value=0.43 Score=38.30 Aligned_cols=86 Identities=16% Similarity=0.105 Sum_probs=47.3
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccC-C-CCceEEEEEEEEeeeecCCCCCCccc
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFR-S-SLTYQAEGYSLVYNQLYPPDGLQNYT 124 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~-~-~~~~~~~g~~~~~~~~~~~~g~~~~~ 124 (487)
+..|..+........+++.++|.-... .....-|.... + .....+.+ ..
T Consensus 5 P~aP~~l~a~~~~~~~~v~LsW~~~~~-------------~~~Y~VyR~~~~~~~~~~i~~~----~~------------ 55 (103)
T 3mpc_A 5 PAFPTGLSAVLDSSGNTANLTWNAAPG-------------ANSYNVKRSTKSGGPYTTIATN----IT------------ 55 (103)
T ss_dssp CCCCEEEEEEECTTSCCEEEEEECCTT-------------CSEEEEEEESSTTCCCEEEEEE----EC------------
T ss_pred CCCCceeEEEEeCCCCEEEEEEECCCC-------------CCEEEEEEecCCCCCcEEEeec----CC------------
Confidence 356888887765445789999987432 12344444332 2 12221110 00
Q ss_pred cCcEEEEEeCCCCCCCEEEEEEecCCCC---CcCceEEEEcCC
Q 039280 125 SGIIHHVLITGLQPNTLYEYECGDPSIS---AMSSSHYFRTMP 164 (487)
Q Consensus 125 ~~~~h~v~l~gL~P~T~Y~Y~vg~~~~~---~~s~~~~F~T~p 164 (487)
.. ..+.++|++|++|+|+|..-+.. ..|...+.++..
T Consensus 56 -~t--sy~d~~l~~g~~Y~Y~V~Avn~~geS~~S~~vs~~~~~ 95 (103)
T 3mpc_A 56 -ST--NYTDTGVATGTKYYYVVSAVSNGVETLNSAEAILQYPK 95 (103)
T ss_dssp -SS--EEEETTCCTTCCCEEEEEEEETTEECCCCCCEECBCCC
T ss_pred -CC--EEEECCCCCCCEEEEEEEEEeCcCCcCCCccEEEECCc
Confidence 01 23458999999999999642211 345555555443
|
| >2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B* | Back alignment and structure |
|---|
Probab=93.54 E-value=0.34 Score=44.44 Aligned_cols=96 Identities=19% Similarity=0.183 Sum_probs=55.4
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
..|..+++...+ .+++.|+|........ + . ..-.-.|+|....+. +..+. .... ...
T Consensus 107 ~pP~~l~~~~~~-~~~l~lsW~~p~~~~~--~---~-~~l~Yevry~~~~~~-w~~~~--~~~~-------------~~~ 163 (214)
T 2b5i_B 107 MAPISLQVVHVE-THRCNISWEISQASHY--F---E-RHLEFEARTLSPGHT-WEEAP--LLTL-------------KQK 163 (214)
T ss_dssp CCCEEEEEEEEC-SSCEEEEEECCSCCGG--G---T-TCEEEEEEEECTTSC-STTSC--CEEE-------------CSC
T ss_pred CCCceEEEEEec-CCeEEEEECCCCcccc--C---C-CceEEEEEEecCCCC-hheee--eeee-------------ccc
Confidence 558899988765 4689999987642100 0 0 001234666554321 11000 0000 112
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC-------CCcCceEEEEcCCCC
Q 039280 128 IHHVLITGLQPNTLYEYECGDPSI-------SAMSSSHYFRTMPVS 166 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~~-------~~~s~~~~F~T~p~~ 166 (487)
-+.+.|.+|+|||.|..||..... ..||+...|+|.+..
T Consensus 164 ~~~~~l~~L~p~t~Y~vqVRa~~~~~~~G~WS~WS~~~~~~T~~~~ 209 (214)
T 2b5i_B 164 QEWICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKPAA 209 (214)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEESCCSSCCCCCCCCCEEEECCC--
T ss_pred ceEEEeccCCCCCEEEEEEEEeeCCCCCCCccCCCCCEEEEcCCCC
Confidence 347788999999999999964321 268888999998754
|
| >2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.54 E-value=0.34 Score=39.80 Aligned_cols=38 Identities=32% Similarity=0.445 Sum_probs=28.7
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCcCceEEEEcCCCC
Q 039280 129 HHVLITGLQPNTLYEYECGDPSI---SAMSSSHYFRTMPVS 166 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~~~---~~~s~~~~F~T~p~~ 166 (487)
..++|++|+|+|.|.+||...+. ..+|....|+|.|..
T Consensus 67 ~~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~t~~~~ 107 (122)
T 2e3v_A 67 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVR 107 (122)
T ss_dssp TEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCCC
T ss_pred ceEEeCCCCCCCEEEEEEEEEeCCccCCCcccccccccCCC
Confidence 36789999999999999954322 257778888887653
|
| >3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B* | Back alignment and structure |
|---|
Probab=93.48 E-value=0.45 Score=44.09 Aligned_cols=96 Identities=21% Similarity=0.205 Sum_probs=58.2
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCC-CCceEEEEEEEEeeeecCCCCCCcccc
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRS-SLTYQAEGYSLVYNQLYPPDGLQNYTS 125 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~-~~~~~~~g~~~~~~~~~~~~g~~~~~~ 125 (487)
+..|..+.+...+++.++.|+|.......+. + ..-.-.|+|..... ..+..+.. .
T Consensus 113 PdPP~nLtv~~~~~~~~l~LsW~~P~~~~~~-~-----~~L~YEVrYr~~~~~~~W~~v~~------------------~ 168 (223)
T 3up1_A 113 PEAPFDLSVVYREGANDFVVTFNTSHLQKKY-V-----KVLMHDVAYRQEKDENKWTHVNL------------------S 168 (223)
T ss_dssp CCCCEEEEEEEETTTTEEEEEEECGGGGCSS-S-----CCEEEEEEEEESSCSSCCEEEEE------------------S
T ss_pred cCCCcceEEEEEcCCCCEEEEECCCCCCCCc-c-----eeEEEEEEEEeCCCCCceEEEEe------------------c
Confidence 4569999998887677899999886421110 0 01234577776532 22221110 0
Q ss_pred CcEEEEEeCCCCCCCEEEEEEecCCC-------CCcCceEEEEcCCCC
Q 039280 126 GIIHHVLITGLQPNTLYEYECGDPSI-------SAMSSSHYFRTMPVS 166 (487)
Q Consensus 126 ~~~h~v~l~gL~P~T~Y~Y~vg~~~~-------~~~s~~~~F~T~p~~ 166 (487)
.....+.|.+|+|+|.|..||..... ..||....|+|++..
T Consensus 169 ~t~~~i~l~~L~Pgt~Y~vqVR~r~~~~~~G~WSeWS~~~~~~T~~~~ 216 (223)
T 3up1_A 169 STKLTLLQRKLQPAAMYEIKVRSIPDHYFKGFWSEWSPSYYFRTPEIN 216 (223)
T ss_dssp SSEEEEEGGGSCTTCEEEEEEEEEECSSCCBCCCCCCCCEEEECCCCC
T ss_pred CceeEEeccccCCCcEEEEEEEEeeCCCCCCCCCCCCCCeEEECCCCC
Confidence 11234567899999999999954321 256777899997653
|
| >3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A | Back alignment and structure |
|---|
Probab=93.42 E-value=0.51 Score=37.32 Aligned_cols=73 Identities=15% Similarity=0.087 Sum_probs=43.1
Q ss_pred CCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCC-CceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 49 QPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSS-LTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 49 ~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~-~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
.|..+++.--. .+++.|+|.-... .+ ....=.|+|...... ..... .. .+-
T Consensus 7 ~P~~l~v~~~t-~~Sv~l~W~~p~~-~~--------~i~~Y~v~y~~~~~~~~~~~~-----~v-------------~~~ 58 (101)
T 3k2m_C 7 VPTKLEVVAAT-PTSLLISWDAPMS-SS--------SVYYYRITYGETGGNSPVQEF-----TV-------------PYS 58 (101)
T ss_dssp SSCEEEEEEEE-TTEEEEEECCCCT-TS--------CCCEEEEEEEETTCSSCCEEE-----EE-------------ETT
T ss_pred CCcceEEeecC-CCEEEEEecCCCC-CC--------ceeeEEEEEEECCCCCccEEE-----Ec-------------CCC
Confidence 58888886543 6899999976431 01 012235667654322 11111 00 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecC
Q 039280 128 IHHVLITGLQPNTLYEYECGDP 149 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~ 149 (487)
...++|+||+|+|.|.++|...
T Consensus 59 ~t~~~l~~L~p~t~Y~~~V~A~ 80 (101)
T 3k2m_C 59 SSTATISGLSPGVDYTITVYAW 80 (101)
T ss_dssp CCEEEECSCCTTCEEEEEEEEE
T ss_pred ccEEEECCCCCCCEEEEEEEEE
Confidence 2478899999999999999643
|
| >1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.39 E-value=0.51 Score=39.01 Aligned_cols=38 Identities=21% Similarity=0.163 Sum_probs=29.4
Q ss_pred EEEEeCCCCCCCEEEEEEecCC---CCCcCceEEEEcCCCC
Q 039280 129 HHVLITGLQPNTLYEYECGDPS---ISAMSSSHYFRTMPVS 166 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~~---~~~~s~~~~F~T~p~~ 166 (487)
..++|+||+|+|.|.++|..-+ .+.+|....|+|+...
T Consensus 75 ~~~~l~~L~p~T~Y~~~V~A~n~~G~Gp~S~~v~~~T~e~v 115 (120)
T 1ujt_A 75 RSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEES 115 (120)
T ss_dssp CEEEEESCCSSEEEEEEEEEESSSCCCCCCCCEEEEECSSC
T ss_pred CEEEECCCCCCCEEEEEEEEECCCccCCCCCCEEEECCCCC
Confidence 4788999999999999994322 2367888899997643
|
| >3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A | Back alignment and structure |
|---|
Probab=93.37 E-value=0.57 Score=42.05 Aligned_cols=94 Identities=15% Similarity=0.140 Sum_probs=55.3
Q ss_pred CCCCceEEEeecc---CCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCcc
Q 039280 47 GFQPEQIFVSLSA---RYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNY 123 (487)
Q Consensus 47 ~~~P~qi~l~~~~---~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~ 123 (487)
...|..+.+.... .++++.|+|......... .+-....=.|+|....+...... ..
T Consensus 103 p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~----~g~~~~~Y~v~y~~~~~~~~~~~------~~----------- 161 (210)
T 3n06_B 103 PDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLK----TGWFTLLYEIRLKPEKAAEWEIH------FA----------- 161 (210)
T ss_dssp CCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCT----TSSCCEEEEEEEECTTCSSCEEE------EE-----------
T ss_pred cCCCceEEEEEecCcCCCceEEEEcCCCCCcccc----CCeEEEEEEEEEecCCCCCCEEE------ec-----------
Confidence 4568888887653 368999999875421000 00001134566766543222211 00
Q ss_pred ccCcEEEEEeCCCCCCCEEEEEEecCC---C-CCcCceEEEEcC
Q 039280 124 TSGIIHHVLITGLQPNTLYEYECGDPS---I-SAMSSSHYFRTM 163 (487)
Q Consensus 124 ~~~~~h~v~l~gL~P~T~Y~Y~vg~~~---~-~~~s~~~~F~T~ 163 (487)
.....+.|.+|+|+|.|..||.... . ..||+...|+|+
T Consensus 162 --~~~~~~~l~~L~p~t~Y~v~Vra~~~~g~wS~wS~~~~~~Tp 203 (210)
T 3n06_B 162 --GQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIP 203 (210)
T ss_dssp --ETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEECC
T ss_pred --cCceEEEEeccCCCCEEEEEEEEecCCCcccCCCCceeEECc
Confidence 0123678899999999999995321 1 367888999995
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=93.36 E-value=0.049 Score=56.59 Aligned_cols=22 Identities=9% Similarity=0.087 Sum_probs=19.4
Q ss_pred HHHHHHHHHcCCcEEEeCcccc
Q 039280 364 VEMEDLLYYYGVDIVFNGHVHA 385 (487)
Q Consensus 364 ~~l~~l~~~~~VdlvlsGH~H~ 385 (487)
+.+.+.++++++++++-||.-.
T Consensus 263 d~v~~FL~~n~l~lIIRaHq~v 284 (521)
T 1aui_A 263 PAVCEFLQHNNLLSILRAHEAQ 284 (521)
T ss_dssp HHHHHHHHHTTCSEEEECCSCC
T ss_pred HHHHHHHHHcCCcEEEEccchh
Confidence 5678899999999999999865
|
| >1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A | Back alignment and structure |
|---|
Probab=93.25 E-value=0.43 Score=42.92 Aligned_cols=93 Identities=11% Similarity=0.093 Sum_probs=54.9
Q ss_pred CCCCceEEEeecc-----CCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEe-ccCCCCceEEEEEEEEeeeecCCCCC
Q 039280 47 GFQPEQIFVSLSA-----RYDSVWISWITGEFQIGDNISPLDPELVQSIVYFR-VFRSSLTYQAEGYSLVYNQLYPPDGL 120 (487)
Q Consensus 47 ~~~P~qi~l~~~~-----~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg-~~~~~~~~~~~g~~~~~~~~~~~~g~ 120 (487)
...|..+.+.... ..+++.|+|..... .+. + ...-.|+|. ...+..+..+.- .
T Consensus 109 p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~-~~~-~------~l~Y~v~y~~~~~~~~w~~~~~----~--------- 167 (215)
T 1cd9_B 109 LEPPMLQALDIGPDVVSHQPGCLWLSWKPWKP-SEY-M------EQECELRYQPQLKGANWTLVFH----L--------- 167 (215)
T ss_dssp CCCCEEEECCC-------CCSCEEEEEECCGG-GTT-S------CEEEEEEEEESSTTCCCEEEEE----E---------
T ss_pred eCCCcEEEEEEeccccCCCCCeEEEEEeCCCC-CCe-E------EEEEEEEEccCCCCCCcEEEec----c---------
Confidence 4557877766542 46789999976542 110 0 013467787 443333322210 0
Q ss_pred CccccCcEEEEEeCCCCCCCEEEEEEecCC---C---CCcCceEEEEcCC
Q 039280 121 QNYTSGIIHHVLITGLQPNTLYEYECGDPS---I---SAMSSSHYFRTMP 164 (487)
Q Consensus 121 ~~~~~~~~h~v~l~gL~P~T~Y~Y~vg~~~---~---~~~s~~~~F~T~p 164 (487)
......+.|.+|+|+|.|..||.... . ..||+...|+|+.
T Consensus 168 ----~~~~~~~~l~~L~p~t~Y~~~Vra~~~~g~G~wS~wS~~~~~~T~e 213 (215)
T 1cd9_B 168 ----PSSKDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPTM 213 (215)
T ss_dssp ----ESCEEEEEECCCCSCSCEEEEEEEEESSSCCCCCCCCCCEEECCCC
T ss_pred ----cCcceEEEEcCCCCCCEEEEEEEeeECCCCCCCcCCCCccceecCC
Confidence 01234678999999999999995432 1 2478888898864
|
| >1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.24 E-value=0.05 Score=46.53 Aligned_cols=47 Identities=19% Similarity=0.281 Sum_probs=33.1
Q ss_pred EEEEeCCCCCCCEEEEEEecCC---CCCcCceEEEEcCCCCCCCCCCcEE
Q 039280 129 HHVLITGLQPNTLYEYECGDPS---ISAMSSSHYFRTMPVSGPSDYPNRI 175 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~~---~~~~s~~~~F~T~p~~~~~~~~~~f 175 (487)
..++|+||+|+|.|..||..-. .+.+|....|+|.+...+.-.++++
T Consensus 82 ts~~v~~L~P~T~Y~~rV~A~n~~G~G~~S~~~~f~T~~~~P~~P~~p~l 131 (137)
T 1wk0_A 82 TNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSCEPDIPNPPRI 131 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCSSSCCCSCSCC
T ss_pred cEEEEcCCCCCCEEEEEEEEEeCCCcCCCCCCEEEECCCCCCCCCCCCEE
Confidence 4788999999999999995432 1257888899998665333224443
|
| >2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.23 E-value=0.61 Score=38.42 Aligned_cols=75 Identities=17% Similarity=0.190 Sum_probs=45.0
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
...|..+++.-.. .+++.|+|.-.... ...=.|+|....+..... .... .+
T Consensus 29 ~~~P~~l~v~~~t-~~Si~lsW~~p~~~-----------i~~Y~V~y~~~~~~~~~~----~~~v-------------~~ 79 (121)
T 2ocf_D 29 SDVPTKLEVVAAT-PTSLLISWDAPAVT-----------VRYYRITYGETGGNSPVQ----EFTV-------------PG 79 (121)
T ss_dssp CCSCEEEEEEEEC-SSCEEEEEECCSSC-----------CCEEEEEEEETTTCSCBE----EEEE-------------ET
T ss_pred CCCCCccEEEecC-CCEEEEEEcCCCCC-----------CcEEEEEEEECCCCCccE----EEEe-------------CC
Confidence 3568888887644 68999999654321 123456676554321110 0000 01
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPS 150 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~ 150 (487)
-...++|+||+|+|.|.++|..-.
T Consensus 80 ~~t~~~l~gL~P~t~Y~~~V~A~~ 103 (121)
T 2ocf_D 80 SKSTATISGLKPGVDYTITVYAVT 103 (121)
T ss_dssp TCCEEEECCCCTTCEEEEEEEEEC
T ss_pred CcCEEEeCCCCCCCEEEEEEEEEe
Confidence 123688999999999999997543
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=92.90 E-value=0.66 Score=41.44 Aligned_cols=35 Identities=29% Similarity=0.277 Sum_probs=26.9
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCcCceEEEEcCC
Q 039280 130 HVLITGLQPNTLYEYECGDPSI---SAMSSSHYFRTMP 164 (487)
Q Consensus 130 ~v~l~gL~P~T~Y~Y~vg~~~~---~~~s~~~~F~T~p 164 (487)
..+|++|+|+|.|.|||..-.. +.+|....++|..
T Consensus 175 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 212 (214)
T 2ibg_A 175 SFKIAPLETATMYEFKLQSFSAASASEFSALKQGRTQR 212 (214)
T ss_dssp EEEECSCCTTCEEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred EEEeCCCCCCCEEEEEEEEEcCCccCCCcceEeeEecC
Confidence 5678999999999999954332 3577788888863
|
| >1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=92.84 E-value=0.33 Score=39.50 Aligned_cols=24 Identities=17% Similarity=0.400 Sum_probs=19.3
Q ss_pred EEEeCCCCCCCEEEEEEecCCCCC
Q 039280 130 HVLITGLQPNTLYEYECGDPSISA 153 (487)
Q Consensus 130 ~v~l~gL~P~T~Y~Y~vg~~~~~~ 153 (487)
..+|+||+|+|.|.|||...+..+
T Consensus 69 ~~~v~~L~p~t~Y~frV~A~N~~G 92 (112)
T 1bpv_A 69 EFTVSGLTEDAAYEFRVIAKNAAG 92 (112)
T ss_dssp EEEECSCCSSCCEEEEEEEECTTS
T ss_pred EEEECCCCCCCEEEEEEEEEECCC
Confidence 467899999999999997655334
|
| >1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A | Back alignment and structure |
|---|
Probab=92.83 E-value=0.6 Score=42.78 Aligned_cols=92 Identities=13% Similarity=0.067 Sum_probs=54.7
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
...|..|++......+++.|+|....... .. ....-.|+|....+..+.... . . ..
T Consensus 122 p~pP~~l~~~~~~~~~~l~v~W~~P~~~~------~~-~~l~Yev~y~~~~~~~w~~~~---~-~-------------~~ 177 (227)
T 1eer_B 122 LDAPVGLVARLADESGHVVLRWLPPPETP------MT-SHIRYEVDVSAGQGAGSVQRV---E-I-------------LE 177 (227)
T ss_dssp CCCCEEEEEEECSSTTCEEEEEECCSSCS------CG-GGEEEEEEEECCSSSCCCCEE---E-E-------------CT
T ss_pred cCcCcceEEEEcCCCCeEEEEEcCCCCcc------cc-cceEEEEEEEcCCCCCcEEEE---E-E-------------ec
Confidence 45689999887554689999998754210 00 001235666654332121100 0 0 00
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCCC--------CCcCceEEEEc
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPSI--------SAMSSSHYFRT 162 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~~--------~~~s~~~~F~T 162 (487)
....+.|.+|+|+|.|..||..... ..||+...|+|
T Consensus 178 ~~~~~~l~~L~p~t~Y~vqVRa~~~~~~~~g~wS~WS~~~~~~t 221 (227)
T 1eer_B 178 GRTECVLSNLRGRTRYTFAVRARMAEPSFGGFWSEWSEPVSLLT 221 (227)
T ss_dssp TCCEEEECCCCSSCEEEEEEEEEECTTTCCEECCCCCCCEEEEC
T ss_pred CceEEEEcccCCCCeEEEEEEEeECCCCCCCcCCCCCCCEEEEC
Confidence 1236788999999999999964321 36777888988
|
| >1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A | Back alignment and structure |
|---|
Probab=92.77 E-value=0.37 Score=43.27 Aligned_cols=96 Identities=16% Similarity=0.085 Sum_probs=53.7
Q ss_pred CCCCceEEEeec-cCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCcccc
Q 039280 47 GFQPEQIFVSLS-ARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTS 125 (487)
Q Consensus 47 ~~~P~qi~l~~~-~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~ 125 (487)
...|..+++... ...+++.|+|.-....-+ ....=.|+|....+..+..+. . . + ..
T Consensus 104 p~pP~~~~~~~~~~~~~sv~l~W~~p~~~~~--------~i~~Y~v~y~~~~~~~~~~~~-------~---~----~-~~ 160 (215)
T 1bqu_A 104 PNPPHNLSVINSEELSSILKLTWTNPSIKSV--------IILKYNIQYRTKDASTWSQIP-------P---E----D-TA 160 (215)
T ss_dssp CCCCEEEEEECC--CCSCEEEEEECCGGGGT--------SCEEEEEEEEETTCSSCEECC-------G---G----G-GC
T ss_pred CCCCCceEEEEecCCCceEEEEEeCCCCCCc--------ceEEEEEEEccCCCCCceEec-------c---c----c-cc
Confidence 345778877654 246899999986542100 011234556554322211110 0 0 0 01
Q ss_pred CcEEEEEeCCCCCCCEEEEEEecCC---C---CCcCceEEEEcCCC
Q 039280 126 GIIHHVLITGLQPNTLYEYECGDPS---I---SAMSSSHYFRTMPV 165 (487)
Q Consensus 126 ~~~h~v~l~gL~P~T~Y~Y~vg~~~---~---~~~s~~~~F~T~p~ 165 (487)
.....++|++|+|+|.|.+||.... . ..||....++|.+.
T Consensus 161 ~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~~ 206 (215)
T 1bqu_A 161 STRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYED 206 (215)
T ss_dssp SCCSEEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECCC
T ss_pred CccceEEeCCCCCCCEEEEEEEEccCCCCCccCCCCCccccccccc
Confidence 1234678999999999999995432 1 13677788888754
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=92.77 E-value=0.46 Score=42.52 Aligned_cols=93 Identities=17% Similarity=0.204 Sum_probs=53.2
Q ss_pred CCceEEEeecc-CCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 49 QPEQIFVSLSA-RYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 49 ~P~qi~l~~~~-~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
.|..+++...+ ..+++.|+|.-....-| ....=.|+|............ .... .+-
T Consensus 108 ~P~~~~~~~~~~s~~sv~l~W~~p~~~~g--------~i~~Y~v~~~~~~~~~~~~~~--~~~~-------------~~~ 164 (211)
T 3p4l_A 108 PPKDVTVVSKEGKPKTIIVNWQPPSEANG--------KITGYIIYYSTDVNAEIHDWV--IEPV-------------VGN 164 (211)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECCTTCCS--------CCCEEEEEEESCTTSCGGGSE--EEEE-------------ESS
T ss_pred CCcceEEEecCCCCCEEEEEECCCCCCCC--------CEEEEEEEEEECCCCCCCceE--EEEe-------------cCC
Confidence 68888887764 36799999986432111 011235566654332111000 0000 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC---CCCcCceEEEEcCC
Q 039280 128 IHHVLITGLQPNTLYEYECGDPS---ISAMSSSHYFRTMP 164 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~---~~~~s~~~~F~T~p 164 (487)
...++|++|+|+|.|.++|...+ .+.+|+...|+|..
T Consensus 165 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~~~~ 204 (211)
T 3p4l_A 165 RLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 204 (211)
T ss_dssp CSEEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEECC-
T ss_pred eeEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEccCcc
Confidence 23678999999999999995432 13577788888764
|
| >2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=92.73 E-value=0.36 Score=39.39 Aligned_cols=23 Identities=17% Similarity=0.261 Sum_probs=18.9
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC
Q 039280 128 IHHVLITGLQPNTLYEYECGDPS 150 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~ 150 (487)
...++|++|+|+|.|.+||...+
T Consensus 70 ~~~~~v~~L~p~t~Y~FRV~A~N 92 (115)
T 2ic2_A 70 SFTASVTDLKPQHTYRFRILAVY 92 (115)
T ss_dssp EEEEEECSCCSSEEEEEEEEEEE
T ss_pred eeEEEeCCCCCCCEEEEEEEEEe
Confidence 34688999999999999996543
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=92.65 E-value=0.24 Score=46.73 Aligned_cols=36 Identities=17% Similarity=0.156 Sum_probs=28.0
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC--CcCceEEEEcCC
Q 039280 129 HHVLITGLQPNTLYEYECGDPSIS--AMSSSHYFRTMP 164 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~~~~--~~s~~~~F~T~p 164 (487)
...+|++|+|+|.|.++|..-+.. .+|....|+|++
T Consensus 253 ~~~~~~~L~p~t~Y~~~V~A~n~~Gg~~s~~~~~~T~~ 290 (290)
T 3l5i_A 253 TEYTLSSLTSDTLYMVRMAAYTDEGGKDGPEFTFTTPK 290 (290)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEEEECCCEEEECCC
T ss_pred eEEEeCCCCCCCEEEEEEEEEeCCCCCCCCceEeecCC
Confidence 367899999999999999543322 478889999864
|
| >1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=92.64 E-value=1.1 Score=36.70 Aligned_cols=35 Identities=14% Similarity=0.104 Sum_probs=24.1
Q ss_pred EeCCCCCCCEEEEEEecCCCC---CcCce-EEEEcCCCC
Q 039280 132 LITGLQPNTLYEYECGDPSIS---AMSSS-HYFRTMPVS 166 (487)
Q Consensus 132 ~l~gL~P~T~Y~Y~vg~~~~~---~~s~~-~~F~T~p~~ 166 (487)
.|.+|+|+|.|.+||...+.. .+|.. ..|+|.+..
T Consensus 77 ~i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~T~~~~ 115 (127)
T 1uey_A 77 AQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASE 115 (127)
T ss_dssp EEECCCTTCEECCEEEEEESSCBCCCCSCCCCEECCCSS
T ss_pred EEecCCCCCEEEEEEEEEeCCccCCccccccceEcCCCC
Confidence 366999999999999653322 35555 478887543
|
| >1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A | Back alignment and structure |
|---|
Probab=92.55 E-value=0.45 Score=45.45 Aligned_cols=95 Identities=16% Similarity=0.087 Sum_probs=54.4
Q ss_pred CCCCceEEEeec-cCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCcccc
Q 039280 47 GFQPEQIFVSLS-ARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTS 125 (487)
Q Consensus 47 ~~~P~qi~l~~~-~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~ 125 (487)
...|..+++... ..++++.|+|.-....-+. ...=.|+|.......+..+.- . + ..
T Consensus 200 p~pP~~~~v~~~~~~~~sv~l~W~~p~~~~~~--------i~~Y~v~y~~~~~~~w~~~~~----------~----~-~~ 256 (303)
T 1i1r_A 200 PNPPHNLSVINSEELSSILKLTWTNPSIKSVI--------ILKYNIQYRTKDASTWSQIPP----------E----D-TA 256 (303)
T ss_dssp CCCCEEEEEECCSSSSSCEEEEEECCGGGGTS--------CEEEEEEEEETTCSSCEECCG----------G----G-GC
T ss_pred cCCCcceEEEEecCCCCEEEEEECCCCCCCcc--------cEEEEEEEEeCCCCCceEEcc----------c----c-CC
Confidence 345788877643 3468999999875421000 012356666554322211100 0 0 01
Q ss_pred CcEEEEEeCCCCCCCEEEEEEecCC---C---CCcCceEEEEcCC
Q 039280 126 GIIHHVLITGLQPNTLYEYECGDPS---I---SAMSSSHYFRTMP 164 (487)
Q Consensus 126 ~~~h~v~l~gL~P~T~Y~Y~vg~~~---~---~~~s~~~~F~T~p 164 (487)
......+|++|+|+|.|.+||.... . ..||+...|+|+.
T Consensus 257 ~~~~~~~l~~L~p~t~Y~~rV~A~n~~G~G~~S~wS~~~~~~T~e 301 (303)
T 1i1r_A 257 STRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE 301 (303)
T ss_dssp SCCSEEEECSCCTTCEEEEEEEEEETTSCSCCCCCCCCEEEECCC
T ss_pred CceeEEEeCCCCCCCEEEEEEEeccCCCCCCcCCCCCccceeCCc
Confidence 1224678999999999999995422 1 2567788899864
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=92.54 E-value=1.2 Score=41.48 Aligned_cols=91 Identities=18% Similarity=0.092 Sum_probs=51.8
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
..|..+++.-.. .+++.|+|.-.... ...=.|+|....+....... .. + ..+-
T Consensus 106 ~~P~~l~~~~~~-~~sv~l~W~~p~~~-----------i~~Y~v~~~~~~~~~~~~~~-----~~------~----~~~~ 158 (283)
T 1tdq_A 106 DAPKNLRVGSRT-ATSLDLEWDNSEAE-----------AQEYKVVYSTLAGEQYHEVL-----VP------K----GIGP 158 (283)
T ss_dssp CCCEEEEEEEEC-SSCEEEEEECCSSC-----------CSEEEEEEEETTCCCCEEEE-----EE------C----CSSS
T ss_pred CCCCceEEEecC-CCeEEEEecCCCCC-----------ccEEEEEEEeCCCCcceEEE-----CC------C----CCcc
Confidence 457777765433 67899999875421 12345677655432221110 00 0 0011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCcCce--EEEEcCCC
Q 039280 128 IHHVLITGLQPNTLYEYECGDPSISAMSSS--HYFRTMPV 165 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~~~~~s~~--~~F~T~p~ 165 (487)
...++|++|+|+|.|.++|......+.|.. ..+.|.|.
T Consensus 159 ~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~~~~~t~~~ 198 (283)
T 1tdq_A 159 TTKTTLTDLVPGTEYGVGISAVMNSKQSIPATMNARTELD 198 (283)
T ss_dssp EEEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCC
T ss_pred cceEEEecCCCCCEEEEEEEEEeCCCCCcceEEEecCCCC
Confidence 567889999999999999965443344443 44555544
|
| >2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=92.47 E-value=0.85 Score=43.70 Aligned_cols=94 Identities=14% Similarity=-0.054 Sum_probs=55.5
Q ss_pred CCCCceEEEeecc-----CCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEe-ccCCCCceEEEEEEEEeeeecCCCCC
Q 039280 47 GFQPEQIFVSLSA-----RYDSVWISWITGEFQIGDNISPLDPELVQSIVYFR-VFRSSLTYQAEGYSLVYNQLYPPDGL 120 (487)
Q Consensus 47 ~~~P~qi~l~~~~-----~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg-~~~~~~~~~~~g~~~~~~~~~~~~g~ 120 (487)
+..|..+++.... .++++.|+|..... .+. ....-.|+|. ..+...+..+.. .
T Consensus 203 p~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~-~~~-------~~l~Y~v~y~~~~~~~~w~~~~~----~--------- 261 (313)
T 2d9q_B 203 LEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQP-GLH-------INQKCELRHKPQRGEASWALVGP----L--------- 261 (313)
T ss_dssp CCCCEEEECCC-------CCSCEEEEEECCGG-GTT-------SCEEEEEEEEESSSCCCCEEEEE----E---------
T ss_pred cCcCceeEEEEecccccCCCCeEEEEECCCCC-CCc-------eeEEEEEEEccCCCCCCcEEccc----c---------
Confidence 3457777666542 46899999987542 111 0113567787 444333332210 0
Q ss_pred CccccCcEEEEEeCCCCCCCEEEEEEecCC---CC---CcCceEEEEcCCC
Q 039280 121 QNYTSGIIHHVLITGLQPNTLYEYECGDPS---IS---AMSSSHYFRTMPV 165 (487)
Q Consensus 121 ~~~~~~~~h~v~l~gL~P~T~Y~Y~vg~~~---~~---~~s~~~~F~T~p~ 165 (487)
....+.+.|++|+|+|.|..||.... .+ .||+...|+|...
T Consensus 262 ----~~~~~~~~l~~L~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T~~~ 308 (313)
T 2d9q_B 262 ----PLEALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTER 308 (313)
T ss_dssp ----CSCEEEEEECSCCSCCCEEEEEEEEECSSCCCCCCCCCCEEECCCC-
T ss_pred ----cCcceEEEEeCCCCCCeEEEEEEeeECCCCCccCCCCCccceeCCcc
Confidence 11245788999999999999996432 12 4777888988754
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=92.37 E-value=1.3 Score=41.70 Aligned_cols=91 Identities=15% Similarity=0.071 Sum_probs=53.4
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
...|..+.+.-.. .+++.|+|.-.... ...=.|+|........... ... ..
T Consensus 21 p~~P~~l~~~~~~-~~sv~l~W~~p~~~-----------~~~Y~v~~~~~~~~~~~~~----~~~-------------~~ 71 (290)
T 3r8q_A 21 IPAPTDLKFTQVT-PTSLSAQWTPPNVQ-----------LTGYRVRVTPKEKTGPMKE----INL-------------AP 71 (290)
T ss_dssp CCCCEEEEEEEEC-SSCEEEEEECCSSC-----------CCEEEEEEEESSSSSCCEE----EEE-------------CT
T ss_pred CCCCCceEEEECC-CCEEEEEEeCCCCC-----------eeEEEEEEEeCCCCCceEE----EEc-------------CC
Confidence 4578888886644 68999999875311 1234567766542211111 000 01
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCCCCCcCc--eEEEEcCCCC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPSISAMSS--SHYFRTMPVS 166 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~~~~~s~--~~~F~T~p~~ 166 (487)
-...+.|++|+|+|.|.++|......+.+. ...++|.+.+
T Consensus 72 ~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~~~~~t~~~~ 113 (290)
T 3r8q_A 72 DSSSVVVSGLMVATKYEVSVYALKDTLTSRPAQGVVTTLENV 113 (290)
T ss_dssp TCCEEEECSCCSSCEEEEEEEEEETTEECCCEEEEEECCCCC
T ss_pred CccEEEeCCCCCCCEEEEEEEEEeCCCCCCCcceeEecCCCC
Confidence 234678999999999999996533222222 3457776543
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=92.29 E-value=0.9 Score=40.34 Aligned_cols=93 Identities=14% Similarity=0.065 Sum_probs=52.2
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCC-CCceEEEEEEEEeeeecCCCCCCcccc
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRS-SLTYQAEGYSLVYNQLYPPDGLQNYTS 125 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~-~~~~~~~g~~~~~~~~~~~~g~~~~~~ 125 (487)
+..|..+.+.- ..+++.|+|.-.... +. ....=.|+|....+ ..+...... .. +
T Consensus 6 P~~P~~~~~~~--~~~sv~l~W~~p~~~-~~-------~i~~Y~v~~~~~~~~~~w~~~~~~---~~------~------ 60 (205)
T 1cfb_A 6 PNAPKLTGITC--QADKAEIHWEQQGDN-RS-------PILHYTIQFNTSFTPASWDAAYEK---VP------N------ 60 (205)
T ss_dssp CCCCEEEEEEE--CSSEEEEEEECCCCT-TS-------CCCEEEEEEEESSSTTCCEEEEEE---EE------T------
T ss_pred CCCCCCcEEEe--cCCEEEEEEECcccC-CC-------ceEEEEEEEecCCCCCCceeeeec---cC------C------
Confidence 45789988887 578999999865321 10 01234567765432 122221111 00 1
Q ss_pred CcEEEEEeCCCCCCCEEEEEEecCCC---CCcC-ceEEEEcCCCC
Q 039280 126 GIIHHVLITGLQPNTLYEYECGDPSI---SAMS-SSHYFRTMPVS 166 (487)
Q Consensus 126 ~~~h~v~l~gL~P~T~Y~Y~vg~~~~---~~~s-~~~~F~T~p~~ 166 (487)
......+ +|+|+|.|.+||..-.. ..+| ....++|.+..
T Consensus 61 -~~~~~~~-~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~~T~~~~ 103 (205)
T 1cfb_A 61 -TDSSFVV-QMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDV 103 (205)
T ss_dssp -TCSEEEE-ECCSSEEEEEEEEEEETTEECCCCCCCCCEEECCCC
T ss_pred -CceEEEE-eCCCCCEEEEEEEEEECCccCCCCCCceeEEcCCcC
Confidence 1113346 99999999999954321 2355 45677876543
|
| >1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=92.28 E-value=0.41 Score=38.76 Aligned_cols=78 Identities=17% Similarity=0.114 Sum_probs=42.9
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
+..|..+++.-.. .+++.|+|.-....-| ....=.|+|.......... .... ..
T Consensus 18 P~~P~~l~~~~~~-~~sv~l~W~~p~~~~g--------~i~~Y~v~~~~~~~~~~~~----~~~~-------------~~ 71 (119)
T 1wfn_A 18 PGPVGHLSFSEIL-DTSLKVSWQEPGEKNG--------ILTGYRISWEEYNRTNTRV----THYL-------------PN 71 (119)
T ss_dssp CCCCSCCEEESCC-SSEEEEECCCCTTCCS--------CCCEEEEEEEESSCGGGCC----CEEE-------------CS
T ss_pred CCCCCceEEEECC-CCEEEEEEcCCCCCCC--------cEEEEEEEEEECCCCCceE----EEEe-------------CC
Confidence 4457777775543 5799999976432101 0112345554433211100 0000 11
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPS 150 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~ 150 (487)
....++|++|+|+|.|.+||...+
T Consensus 72 ~~~~~~i~~L~p~t~Y~~~V~A~n 95 (119)
T 1wfn_A 72 VTLEYRVTGLTALTTYTIEVAAMT 95 (119)
T ss_dssp SCCEEEEESCCTTCEEEEEEEEEC
T ss_pred CceEEEEcCCCCCCEEEEEEEEEc
Confidence 234678899999999999996544
|
| >1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=92.22 E-value=1.5 Score=35.98 Aligned_cols=90 Identities=16% Similarity=0.049 Sum_probs=49.7
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
+..|..+++.-.. +++.|+|.-....-| . ...=.|+|.... . ... .... ..
T Consensus 28 P~~P~~l~~~~~~--~sv~l~W~~P~~~~g-~-------i~~Y~v~y~~~~-~-~~~----~~~~-------------~~ 78 (126)
T 1x5i_A 28 PEVPSSLHVRPLV--TSIVVSWTPPENQNI-V-------VRGYAIGYGIGS-P-HAQ----TIKV-------------DY 78 (126)
T ss_dssp CCSCSEEEEEEET--TEEEEEEECCSCTTB-C-------CCEEEEEECSSC-G-GGE----EEEC-------------CT
T ss_pred CCCCCeeEEEecC--CEEEEEEcCCCCCCC-C-------EeEEEEEEEcCC-C-Cce----EEEe-------------CC
Confidence 3478888887764 899999987642111 0 112345665321 1 110 0000 11
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCCCCCcCc--eEEEEcCCC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPSISAMSS--SHYFRTMPV 165 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~~~~~s~--~~~F~T~p~ 165 (487)
.....+|++|+|+|.|.++|...+..+.+. ...++|.+.
T Consensus 79 ~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~~~T~~~ 119 (126)
T 1x5i_A 79 KQRYYTIENLDPSSHYVITLKAFNNVGEGIPLYESAVTRPH 119 (126)
T ss_dssp TCCEEEECSCCSSCEECCEEEEECSSCBCCCCCCCEECCCC
T ss_pred CeeEEEEeCCCCCCEEEEEEEEEeCCccCcceeeEEecccC
Confidence 234678999999999999996543223222 234555544
|
| >2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A | Back alignment and structure |
|---|
Probab=92.20 E-value=0.63 Score=41.62 Aligned_cols=21 Identities=24% Similarity=0.309 Sum_probs=18.2
Q ss_pred EEEEeCCCCCCCEEEEEEecC
Q 039280 129 HHVLITGLQPNTLYEYECGDP 149 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~ 149 (487)
..++|+||+|+|.|.++|..-
T Consensus 157 t~~~l~gL~p~t~Y~~~V~A~ 177 (195)
T 2qbw_A 157 STATISGLKPGVDYTITVYAY 177 (195)
T ss_dssp SEEEECSCCTTCEEEEEEEEE
T ss_pred CEEEeCCCCCCCEEEEEEEEE
Confidence 468899999999999999653
|
| >2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.08 E-value=0.66 Score=37.63 Aligned_cols=90 Identities=12% Similarity=0.029 Sum_probs=49.5
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
+..|..+++.-.. +++.|+|.-....-| ....=.|+|..... ..... .. ..
T Consensus 18 P~~P~~l~~~~~~--~sv~l~W~~P~~~ng--------~i~gY~i~y~~~~~-~~~~~-----~~-------------~~ 68 (116)
T 2edb_A 18 PDQPSSLHVRPQT--NCIIMSWTPPLNPNI--------VVRGYIIGYGVGSP-YAETV-----RV-------------DS 68 (116)
T ss_dssp CCCCSCEEEEECS--SCEEEEECCCSCTTB--------CCCEEEEEEEESST-TSEEE-----EE-------------ET
T ss_pred CCCCCCeEEEECC--CEEEEEEcCCCCCCC--------ceeEEEEEEEeCCC-CeEEE-----Ee-------------CC
Confidence 3468888887654 899999976532101 01123566664221 11110 00 01
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCCCCCcCc--eEEEEcCCC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPSISAMSS--SHYFRTMPV 165 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~~~~~s~--~~~F~T~p~ 165 (487)
-....+|++|+|+|.|.+||...+..+.+. ...++|.+.
T Consensus 69 ~~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~~~~~~~T~~~ 109 (116)
T 2edb_A 69 KQRYYSIERLESSSHYVISLKAFNNAGEGVPLYESATTRSI 109 (116)
T ss_dssp TCCEEEECSCCSSSBEEEEEEEEETTEECSCEEECCBCCCS
T ss_pred CeeEEEeCCCCCCCEEEEEEEEEeCCccCCCCcceeecccC
Confidence 124678999999999999996543323332 234555543
|
| >3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene} | Back alignment and structure |
|---|
Probab=92.07 E-value=0.56 Score=36.67 Aligned_cols=71 Identities=17% Similarity=0.177 Sum_probs=42.7
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCC-ceEEEEEEEEeeeecCCCCCCccccC
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSL-TYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~-~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
..|..+++.-.. .+++.|+|.-.... ...=.|+|....... .... .. .+
T Consensus 6 ~~P~~l~v~~~t-~~Si~lsW~~p~~~-----------i~~Y~v~y~~~~~~~~~~~~-----~v-------------~~ 55 (97)
T 3qht_C 6 SVPTKLEVVAAT-PTSLLISWDASSSS-----------VSYYRITYGETGGNSPVQEF-----TV-------------PG 55 (97)
T ss_dssp CSSSSCEEEEEE-TTEEEEECCCCCSS-----------CCEEEEEEEESSSCSCCEEE-----EE-------------ET
T ss_pred CCCCceEEEecC-CCEEEEEEeCCCCC-----------CCEEEEEEEECCCCCccEEE-----Ee-------------CC
Confidence 457888776543 68999999653210 123356676543321 1110 00 11
Q ss_pred cEEEEEeCCCCCCCEEEEEEec
Q 039280 127 IIHHVLITGLQPNTLYEYECGD 148 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~ 148 (487)
-...++|+||+|+|.|.++|..
T Consensus 56 ~~t~~~l~~L~p~t~Y~v~V~A 77 (97)
T 3qht_C 56 SSSTATISGLSPGVDYTITVYA 77 (97)
T ss_dssp TCCEEEECSCCTTCEEEEEEEE
T ss_pred CcCEEEeCCCCCCCEEEEEEEE
Confidence 2246889999999999999964
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=92.06 E-value=0.59 Score=45.63 Aligned_cols=92 Identities=11% Similarity=0.051 Sum_probs=53.8
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
..|..+.+.-..+.+++.|+|.-... + ....=.|+|....+....... ..+ .+.
T Consensus 3 ~~P~~l~~~~~~~~~sv~l~W~~~~~--~--------~i~~Y~v~~~~~~~~~~~~~~---~~~-------------~~~ 56 (368)
T 1fnf_A 3 SPPTNLHLEANPDTGVLTVSWERSTT--P--------DITGYRITTTPTNGQQGNSLE---EVV-------------HAD 56 (368)
T ss_dssp CCCEEEEEEECSSSSCEEEEEECCSC--S--------SCCEEEEEEEETTTCSSCCEE---EEE-------------CTT
T ss_pred CCCcceEEEecCCCcEEEEEEeCCCC--C--------CceEEEEEEEECCCCCCceeE---EEe-------------cCC
Confidence 46888888765534479999987541 0 112346677665432211110 001 012
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCcCceEEEEcCCC
Q 039280 128 IHHVLITGLQPNTLYEYECGDPSISAMSSSHYFRTMPV 165 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~~~~~s~~~~F~T~p~ 165 (487)
...++|++|+|+|.|.|||......+.|...+..+.+.
T Consensus 57 ~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~~~ 94 (368)
T 1fnf_A 57 QSSCTFDNLSPGLEYNVSVYTVKDDKESVPISDTIIPA 94 (368)
T ss_dssp CCEEECCCCCTTSCEEEEEEEEETTEECCCEEEEECCC
T ss_pred cCEEEECCCCCCCEEEEEEEEEcCCCccCceeeeecCC
Confidence 24678999999999999997544345565555555443
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.03 E-value=0.66 Score=40.52 Aligned_cols=82 Identities=21% Similarity=0.247 Sum_probs=46.7
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
...|..+.+.-.. .+++.|+|.......+. ....=.|+|...+........ ..
T Consensus 103 p~~p~~~~~~~~~-~~~v~l~W~~p~~~~~~-------~i~~Y~v~~~~~~~~~~~~~~------~~------------- 155 (197)
T 3lpw_A 103 PLPPGKITLMDVT-RNSVSLSWEKPEHDGGS-------RILGYIVEMQTKGSDKWATCA------TV------------- 155 (197)
T ss_dssp CCCCSCEEEEEEC-SSCEEEEECCCSCCTTS-------CCCEEEEEEEETTCSCCEEEE------EE-------------
T ss_pred CCCCcccEEEecc-CCeEEEEecCCCcCCCC-------cccEEEEEEEeCCCCceEEee------cc-------------
Confidence 4567888766443 67999999864321110 012345666655433222211 00
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCCCCCcC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPSISAMS 155 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~~~~~s 155 (487)
-...++|++|+|+|.|.|+|......+.+
T Consensus 156 ~~~~~~~~~L~p~t~Y~~~V~A~n~~G~s 184 (197)
T 3lpw_A 156 KVTEATITGLIQGEEYSFRVSAQNEKGIS 184 (197)
T ss_dssp SSSEEEECCCCTTCEEEEEEEEEETTEEC
T ss_pred cccEEEeCCcCCCCEEEEEEEEEeCCccC
Confidence 11256789999999999999754433333
|
| >3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* | Back alignment and structure |
|---|
Probab=91.68 E-value=0.62 Score=49.02 Aligned_cols=37 Identities=27% Similarity=0.341 Sum_probs=28.4
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCcCceEEEEcCCCC
Q 039280 130 HVLITGLQPNTLYEYECGDPSI---SAMSSSHYFRTMPVS 166 (487)
Q Consensus 130 ~v~l~gL~P~T~Y~Y~vg~~~~---~~~s~~~~F~T~p~~ 166 (487)
.++|+||+|+|.|.+||...+. +.+|+...|+|++..
T Consensus 496 s~~l~gL~P~T~Y~frVrA~n~~G~Gp~S~~v~~~T~~~~ 535 (536)
T 3fl7_A 496 SVTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQTLSPE 535 (536)
T ss_dssp EEECCSCCSSCEEEEEEEEECC---CEECCCEEEECCC--
T ss_pred EEEECCCCCCCEEEEEEEEEcCCcccCCCCCEEEEeCCCC
Confidence 6789999999999999954332 257888999998653
|
| >1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=91.61 E-value=0.18 Score=41.91 Aligned_cols=37 Identities=30% Similarity=0.355 Sum_probs=28.9
Q ss_pred EEEeCCCCCCCEEEEEEecCCCC---CcCceEEEEcCCCC
Q 039280 130 HVLITGLQPNTLYEYECGDPSIS---AMSSSHYFRTMPVS 166 (487)
Q Consensus 130 ~v~l~gL~P~T~Y~Y~vg~~~~~---~~s~~~~F~T~p~~ 166 (487)
.++|++|+|+|.|.+||...+.. .+|+...++|.+.+
T Consensus 76 ~~~v~gL~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~p 115 (120)
T 1wfu_A 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRES 115 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCCC
T ss_pred EEEECCCCCCCEEEEEEEEECCCCCCCCCccEeeEcCCCC
Confidence 47789999999999999654433 46777889998653
|
| >1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=91.52 E-value=0.98 Score=35.35 Aligned_cols=84 Identities=21% Similarity=0.253 Sum_probs=54.7
Q ss_pred CCCCceEEEeecc-CCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEE----eccCCC-CceEEEEEEEEeeeecCCCCC
Q 039280 47 GFQPEQIFVSLSA-RYDSVWISWITGEFQIGDNISPLDPELVQSIVYF----RVFRSS-LTYQAEGYSLVYNQLYPPDGL 120 (487)
Q Consensus 47 ~~~P~qi~l~~~~-~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~y----g~~~~~-~~~~~~g~~~~~~~~~~~~g~ 120 (487)
...|-|+.++-+. .|++-.|.|...+. .+..+| ...... .++.+.
T Consensus 5 ~~gpa~v~is~~~s~pdsh~iqW~~~s~--------------s~I~eyiL~~R~k~~~g~Wke~~--------------- 55 (98)
T 1oww_A 5 SSGPVEVFITETPSQPNSHPIQWNAPQP--------------SHISKYILRWRPKNSVGRWKEAT--------------- 55 (98)
T ss_dssp -CCCCEEECCCCSSCTTCEEEEEECCSS--------------SCEEEEEEEEEETTCSSCCEEEE---------------
T ss_pred CCcceEEEecCCCCCCCccceEEecCCC--------------CCceEEEEEEEEcCCCCceeEEE---------------
Confidence 3458888887664 37999999999763 244444 433321 111110
Q ss_pred CccccCcEEEEEeCCCCCCCEEEEEEecCCCCCcCce--EEEEc
Q 039280 121 QNYTSGIIHHVLITGLQPNTLYEYECGDPSISAMSSS--HYFRT 162 (487)
Q Consensus 121 ~~~~~~~~h~v~l~gL~P~T~Y~Y~vg~~~~~~~s~~--~~F~T 162 (487)
.++.+..-+|+||+||..|.=+|-+...-+|+++ |.|.|
T Consensus 56 ---Ip~h~nSYtI~GL~P~~~YE~qv~S~~ryG~~Evs~f~FtT 96 (98)
T 1oww_A 56 ---IPGHLNSYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTT 96 (98)
T ss_dssp ---ECSSCCEEEECSCCSSEEEEEEEEEEESSSCEEEEEEEEEE
T ss_pred ---ecCccceEEEecCCCCcEEEEEEEEeeccCcccceEEEEEe
Confidence 1346677889999999999999976554577764 56665
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=91.41 E-value=1.1 Score=40.00 Aligned_cols=79 Identities=18% Similarity=0.210 Sum_probs=45.6
Q ss_pred CCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCcE
Q 039280 49 QPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGII 128 (487)
Q Consensus 49 ~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~ 128 (487)
.|..+.+.-.. .+++.|+|.-.... ....=.|+|....+..... .... .+-.
T Consensus 116 ~P~~l~~~~~~-~~sv~l~W~~p~~~----------~i~~Y~v~~~~~~~~~~~~----~~~~-------------~~~~ 167 (203)
T 2gee_A 116 PPTDLRFTNIG-PDTMRVTWAPPPSI----------DLTNFLVRYSPVKNEEDVA----ELSI-------------SPSD 167 (203)
T ss_dssp CCEEEEEEEEE-TTEEEEEEECCSSC----------CCSEEEEEEEETTCGGGCE----EEEE-------------CTTC
T ss_pred CCCceEEEEcC-CCEEEEEEcCCCCC----------CccEEEEEEEECCCCCccE----EEEc-------------CCCc
Confidence 57887765444 58999999875320 1123456776643221111 0000 1123
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCcC
Q 039280 129 HHVLITGLQPNTLYEYECGDPSISAMS 155 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~~~~~~s 155 (487)
..++|+||+|+|.|.++|......+.|
T Consensus 168 ~~~~i~~L~p~t~Y~~~V~A~~~~g~s 194 (203)
T 2gee_A 168 NAVVLTNLLPGTEYVVSVSSVYEQHES 194 (203)
T ss_dssp CEEEECSCCTTCEEEEEEEEEETTEEC
T ss_pred CEEEECCCCCCCEEEEEEEEecCCCcC
Confidence 467899999999999999654333333
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=91.03 E-value=1.9 Score=40.22 Aligned_cols=102 Identities=15% Similarity=0.124 Sum_probs=57.8
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
...|..+.+.-.. .+++.|+|.-.... ...=.|+|.......... .... ..
T Consensus 15 p~~P~~l~~~~~~-~~sv~l~W~~~~~~-----------~~~Y~v~~~~~~~~~~~~----~~~~-------------~~ 65 (283)
T 1tdq_A 15 IDGPTQILVRDVS-DTVAFVEWTPPRAK-----------VDFILLKYGLVGGEGGKT----TFRL-------------QP 65 (283)
T ss_dssp SCCCEEEEEEEEC-SSCEEEEEECCSSC-----------CSEEEEEEEESSSSCCCE----EEEE-------------CT
T ss_pred CCCCcEEEEEecC-CCeEEEEEECCCCc-----------eeEEEEEEEEecCCCCcE----EEEe-------------CC
Confidence 3568888876554 58999999875410 123467775432211111 1101 01
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCCCCCcC--ceEEEEcCCCCCCCCCCcEEEEEec
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPSISAMS--SSHYFRTMPVSGPSDYPNRIAVVGD 180 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~~~~~s--~~~~F~T~p~~~~~~~~~~f~v~gD 180 (487)
....+.|++|+|+|.|.++|......+.| ....|+|.|.+.. .+++..+++
T Consensus 66 ~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~t~p~~P~---~l~~~~~~~ 118 (283)
T 1tdq_A 66 PLSQYSVQALRPGSRYEVSISAVRGTNESDASSTQFTTEIDAPK---NLRVGSRTA 118 (283)
T ss_dssp TCSEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCE---EEEEEEECS
T ss_pred CCCEEEecCCCCCCEEEEEEEEECCCCCCCCeeEEEECCCCCCC---ceEEEecCC
Confidence 22367889999999999999654323333 3456777665431 344444443
|
| >1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=91.01 E-value=1.3 Score=35.70 Aligned_cols=91 Identities=19% Similarity=0.132 Sum_probs=53.1
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
..|..+.+.-. .+++.++|.-.... +.. ...=+|+|... +..+..+... + ..-
T Consensus 9 ~pP~~l~v~~~--~~sv~L~W~pP~~~-~~~-------I~gY~vey~~~-~~~W~~~~~~---~-------------~~~ 61 (108)
T 1v5j_A 9 SPPRGLVAVRT--PRGVLLHWDPPELV-PKR-------LDGYVLEGRQG-SQGWEVLDPA---V-------------AGT 61 (108)
T ss_dssp CCCEEEEEEEC--SSSEEEEEECCSCC-SSC-------CCBEEEEEEET-TCCCEEEEEE---E-------------CSS
T ss_pred CCCcceEEEEe--CCEEEEEECCCCCC-CCC-------CcEEEEEEEeC-CCCcEEeeee---c-------------CCC
Confidence 56888887653 46899999886531 111 12346788873 3333332211 1 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCC---CcCceEEEEcCCC
Q 039280 128 IHHVLITGLQPNTLYEYECGDPSIS---AMSSSHYFRTMPV 165 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~~~---~~s~~~~F~T~p~ 165 (487)
..+.+|.+|.|++.|.+||..-+.. ..|+...++|...
T Consensus 62 ~t~~~v~~L~pg~~Y~FRV~A~n~~G~s~pS~~~~v~T~~~ 102 (108)
T 1v5j_A 62 ETELLVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTSGL 102 (108)
T ss_dssp CCEEECCCCCTTSCEECCBEEEETTEEEEECSCCCCCCSSC
T ss_pred cCEEEeCCCCCCCEEEEEEEEEcCCCCcCCCCCEEEEeCCc
Confidence 2356799999999999999543322 3445555666543
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=90.90 E-value=1.2 Score=41.98 Aligned_cols=89 Identities=22% Similarity=0.079 Sum_probs=50.9
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
..|..+++.-.+ .+++.|+|.-.... ...=.|+|....+...... .. ...
T Consensus 114 ~~P~~l~~~~~~-~~sv~l~W~~p~~~-----------~~~Y~v~~~~~~~~~~~~~-----~~-------------~~~ 163 (290)
T 3r8q_A 114 SPPRRARVTDAT-ETTITISWRTKTET-----------ITGFQVDAVPANGQTPIQR-----TI-------------KPD 163 (290)
T ss_dssp CCCEEEEEEEEC-SSCEEEEEECCSCC-----------CCEEEEEEEESSSCCCEEE-----EE-------------CTT
T ss_pred CCCceeEEEEcC-CCeEEEEEeCCCCc-----------ccEEEEEEEECCCCcceEE-----ec-------------CCC
Confidence 467777776433 68999999875311 1234566665443221110 00 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCcCc--eEEEEcCCCC
Q 039280 128 IHHVLITGLQPNTLYEYECGDPSISAMSS--SHYFRTMPVS 166 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~~~~~s~--~~~F~T~p~~ 166 (487)
...+.|++|+|+|.|.++|......+.|. ...++|.|.+
T Consensus 164 ~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~~~~~t~p~~ 204 (290)
T 3r8q_A 164 VRSYTITGLQPGTDYKIYLYTLNDNARSSPVVIDASTAIDA 204 (290)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCC
T ss_pred ccEEEECCCCCCCEEEEEEEEEeCCcccCCEEEEecCCCCC
Confidence 23578999999999999996543333443 3456666543
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=90.87 E-value=1.3 Score=43.23 Aligned_cols=90 Identities=11% Similarity=0.054 Sum_probs=53.4
Q ss_pred CCCceEEEeeccCCC-cEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 48 FQPEQIFVSLSARYD-SVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~-~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
..|..+.+.-.. .+ ++.|+|.-... + ....=.|+|....+....... .... .
T Consensus 4 ~~P~~l~~~~~~-~~~sv~l~W~~~~~--~--------~~~~Y~v~~~~~~~~~~~~~~---~~~~-------------~ 56 (375)
T 3t1w_A 4 SPPTNLHLEANP-DTGVLTVSWERSTT--P--------DITGYRITTTPTNGQQGNSLE---EVVH-------------A 56 (375)
T ss_dssp CCCEEEEEEEET-TTTEEEEEEECCSC--S--------SCCEEEEEEEETTCTTSCCEE---EEEE-------------T
T ss_pred CCCCccEEEecC-CCeEEEEEEeCCCC--C--------CeeeEEEEEEECCCCCCccee---EEcC-------------C
Confidence 458888887655 55 99999986532 1 112346677665432111111 0010 1
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCCCCCcCceEEEEcCC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPSISAMSSSHYFRTMP 164 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~~~~~s~~~~F~T~p 164 (487)
-...+.|++|+|+|.|.++|......+.|.....++.+
T Consensus 57 ~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~~ 94 (375)
T 3t1w_A 57 DQSSCTFDNLSPGLEYNVSVYTVKDDKESVPISDTIIP 94 (375)
T ss_dssp TCCEEEECCCCTTCCEEEEEEEEETTEECCCEEEEECC
T ss_pred CccEEEEcCCcCCCEEEEEEEEEcCCCCCCcEEeeEcC
Confidence 12467889999999999999655444666665555543
|
| >3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.79 E-value=0.69 Score=36.68 Aligned_cols=76 Identities=17% Similarity=0.125 Sum_probs=43.5
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
..|..+++.--. .+++.|+|.-....-+ ....=.|+|.......... .... .+-
T Consensus 9 ~~P~~l~v~~~t-~~Sv~lsW~~p~~~~g--------~i~~Y~v~y~~~~~~~~~~----~~~v-------------~~~ 62 (103)
T 3t04_D 9 SVPTKLEVVDAT-PTSLKISWDAYYSSWQ--------NVKYYRITYGETGGDSPVQ----EFTV-------------PGY 62 (103)
T ss_dssp CCCCSCEEEEEE-TTEEEEECTTTTTTSC--------CCCEEEEEEEETTCSSCCE----EEEE-------------ETT
T ss_pred CCCceeEEEecC-CCEEEEEccCCCCCCC--------ccceEEEEEEECCCCCccE----EEEc-------------CCC
Confidence 457888876533 6899999965431100 0122356676543211111 0000 112
Q ss_pred EEEEEeCCCCCCCEEEEEEecC
Q 039280 128 IHHVLITGLQPNTLYEYECGDP 149 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~ 149 (487)
...++|+||+|+|.|.++|...
T Consensus 63 ~ts~~l~~L~p~t~Y~~~V~A~ 84 (103)
T 3t04_D 63 YSTATISGLKPGVDYTITVYAY 84 (103)
T ss_dssp CCEEEECSCCTTCCEEEEEEEE
T ss_pred cCEEEeCCCCCCCEEEEEEEEE
Confidence 3478899999999999999654
|
| >1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=89.76 E-value=0.48 Score=38.30 Aligned_cols=37 Identities=16% Similarity=0.193 Sum_probs=24.9
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC---CcCceE-EEEcCCC
Q 039280 129 HHVLITGLQPNTLYEYECGDPSIS---AMSSSH-YFRTMPV 165 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~~~~---~~s~~~-~F~T~p~ 165 (487)
..++|++|+|+|.|.|||...+.. .+|..- .++|.+.
T Consensus 76 ~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~t~~~ 116 (121)
T 1wf5_A 76 TSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPES 116 (121)
T ss_dssp CEEEEESCCTTCEEEEEEEEEESSCEEEECCCCSCEECCCC
T ss_pred cEEEECCcCCCCEEEEEEEEEcCCccCCCcCCcceeEcCCC
Confidence 467889999999999999654322 234432 4666544
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=89.17 E-value=1.6 Score=38.82 Aligned_cols=22 Identities=27% Similarity=0.332 Sum_probs=18.2
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 039280 129 HHVLITGLQPNTLYEYECGDPS 150 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~~ 150 (487)
..++|++|+|+|.|.+||...+
T Consensus 165 ~~~~i~~L~p~t~Y~~~V~A~n 186 (209)
T 2vkw_A 165 DHVMLKSLDWNAEYEVYVVAEN 186 (209)
T ss_dssp CEEEECSCCTTCEEEEEEEEEE
T ss_pred cEEEecCCCCCCEEEEEEEEEe
Confidence 3578999999999999996543
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=88.74 E-value=1.6 Score=42.39 Aligned_cols=74 Identities=18% Similarity=0.185 Sum_probs=43.3
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
..|..+.+.-.. .+++.|+|.-.... ...=.|+|....+..... ..... +-
T Consensus 277 ~~P~~l~~~~~~-~~sv~l~W~~p~~~-----------i~~Y~v~~~~~~~~~~~~----~~~~~-------------~~ 327 (368)
T 1fnf_A 277 DVPRDLEVVAAT-PTSLLISWDAPAVT-----------VRYYRITYGETGGNSPVQ----EFTVP-------------GS 327 (368)
T ss_dssp CSCEEEEEEEEE-TTEEEEEEECCSSC-----------CSEEEEEEEETTCCSCCE----EEEEE-------------TT
T ss_pred CCCCeeEEEecC-CCEEEEEeeCCCCc-----------cceEEEEEEECCCCCccE----EEEcC-------------CC
Confidence 457777665533 57999999765321 123456666554321111 00010 11
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC
Q 039280 128 IHHVLITGLQPNTLYEYECGDPS 150 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~ 150 (487)
....+|++|+|++.|.|+|....
T Consensus 328 ~~~~~~~~L~p~t~Y~~~V~A~~ 350 (368)
T 1fnf_A 328 KSTATISGLKPGVDYTITVYAVT 350 (368)
T ss_dssp CCEEEECSCCTTCCEEEEEEEEC
T ss_pred eeEEEecCCCCCCEEEEEEEEeC
Confidence 24678899999999999996543
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A | Back alignment and structure |
|---|
Probab=88.60 E-value=2.6 Score=41.08 Aligned_cols=38 Identities=21% Similarity=0.211 Sum_probs=26.8
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCcCc--eEEEEcCCCC
Q 039280 129 HHVLITGLQPNTLYEYECGDPSISAMSS--SHYFRTMPVS 166 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~~~~~~s~--~~~F~T~p~~ 166 (487)
..++|++|+|+|.|.+||...+..+.|+ ...|+|.+.+
T Consensus 349 ~~~~i~~L~~~t~Y~~~V~A~n~~G~s~~s~~~~~T~~~P 388 (389)
T 2jll_A 349 DHIILEHLQWTMGYEVQITAANRLGYSEPTVYEFSMPPKP 388 (389)
T ss_dssp CEEEECSCCTTCEEEEEEEEEC-CCBCCCEEEEEECCCCC
T ss_pred ceEEeCCcCCCCEEEEEEEEEcCCcCCCceeeEecCCCCC
Confidence 4678999999999999996544333332 3488887754
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.09 E-value=1.8 Score=38.13 Aligned_cols=88 Identities=20% Similarity=0.266 Sum_probs=49.3
Q ss_pred CCceEEEeec-cCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCC-CceEEEEEEEEeeeecCCCCCCccccC
Q 039280 49 QPEQIFVSLS-ARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSS-LTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 49 ~P~qi~l~~~-~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~-~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
.|.++.+.-- ..++++.|+|.-... . ....=.|+|...... ..... .. . +
T Consensus 2 ~P~~l~v~~v~~~~~si~l~W~~p~~---~-------~i~~Y~v~~~~~~~~~~~~~~-----~~------~-------~ 53 (201)
T 2ha1_A 2 GPVEVFITETPSQPNSHPIQWNAPQP---S-------HISKYILRWRPKNSVGRWKEA-----TI------P-------G 53 (201)
T ss_dssp CCCEEECCSCSCCSSCEEEEEECCSS---T-------TCCEEEEEEEETTCSSCCEEE-----EE------C-------T
T ss_pred CceeEEEEecCCCCCEEEEEEeCCCC---C-------CceEEEEEEEECCCCCceEEE-----ec------C-------C
Confidence 4777776542 236899999987521 0 112345677754321 11111 01 0 1
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCCCCCcCc--eEEEEcCC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPSISAMSS--SHYFRTMP 164 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~~~~~s~--~~~F~T~p 164 (487)
....++|+||+|+|.|.++|......+.+. ...|+|..
T Consensus 54 ~~~~~~i~~L~p~t~Y~~~V~a~n~~G~~~~~~~~~~t~~ 93 (201)
T 2ha1_A 54 HLNSYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTTTS 93 (201)
T ss_dssp TCCEEEECSCCTTEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred CccEEEecCCCCCCEEEEEEEEEecccccCceeEEEecCC
Confidence 123678999999999999997543223322 44566643
|
| >2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=87.90 E-value=0.34 Score=38.61 Aligned_cols=75 Identities=17% Similarity=0.169 Sum_probs=43.8
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
...|..+++.-.. .+++.|+|.-.... ...=.|+|.......... . .. ..+
T Consensus 8 p~~P~~l~v~~~t-~~si~lsW~~p~g~-----------i~~Y~v~y~~~~~~~~~~----~------~~-------v~~ 58 (105)
T 2ekj_A 8 RSPPSNLALASET-PDSLQVSWTPPLGR-----------VLHYWLTYAPASGLGPEK----S------VS-------VPG 58 (105)
T ss_dssp CCCCEEEEEEEEE-TTEEEEEEECCSSC-----------CSBBCBBCCCTTSCSCCC----C------BC-------CBT
T ss_pred CCCCCceEEEeCC-CCEEEEEEeCCCCc-----------ceEEEEEEEECCCCCccE----E------EE-------eCC
Confidence 3568888886544 68999999875321 112345554432210000 0 00 011
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPS 150 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~ 150 (487)
-...++|+||+|+|.|.++|..-.
T Consensus 59 ~~~~~~l~~L~p~t~Y~~~V~A~~ 82 (105)
T 2ekj_A 59 ARSHVTLPDLQAATKYRVLVSAIY 82 (105)
T ss_dssp TSSEEEECSCCSSCCCBCBBCBBC
T ss_pred CcCEEEeCCCCCCCEEEEEEEEEe
Confidence 234678999999999999996543
|
| >2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens} | Back alignment and structure |
|---|
Probab=87.89 E-value=2.5 Score=38.73 Aligned_cols=69 Identities=12% Similarity=0.161 Sum_probs=39.8
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
...|..++.+--. ++++.++|...... ..+-.|..-.+. ... ++. +.++
T Consensus 151 p~Pp~NL~At~VT-~tSVtLsW~aP~~~-------------~GI~gY~ly~~g-~~v--~~v-------~~~~------- 199 (238)
T 2w1n_A 151 VNPVRDFKASEIN-KKNVTVTWTEPETT-------------EGLEGYILYKDG-KKV--AEI-------GKDE------- 199 (238)
T ss_dssp CCCCEEEEEEEEC-SSCEEEEEECCSCC-------------TTEEEEEEEETT-EEE--EEE-------ETTC-------
T ss_pred cCCCCceEEEEcc-CCeEEEEecCCCCC-------------CCceeEEEEeCC-cee--EEe-------eccc-------
Confidence 3456777766544 78999999886532 123344432221 111 111 0011
Q ss_pred cEEEEEeCCCCCCCEEEEEEec
Q 039280 127 IIHHVLITGLQPNTLYEYECGD 148 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~ 148 (487)
-+.+++||+|+|.|-|||..
T Consensus 200 --tsyt~~gLk~~TeYsF~V~A 219 (238)
T 2w1n_A 200 --TSYTFKKLNRHTIYNFKIAA 219 (238)
T ss_dssp --CEEEECSCCTTCEEEEEEEE
T ss_pred --eEEEecCCCCCCEEEEEEEE
Confidence 13567999999999999954
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=87.83 E-value=0.53 Score=43.07 Aligned_cols=38 Identities=18% Similarity=0.226 Sum_probs=26.9
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCC---CcCc-eEEEEcCCCC
Q 039280 129 HHVLITGLQPNTLYEYECGDPSIS---AMSS-SHYFRTMPVS 166 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~~~~---~~s~-~~~F~T~p~~ 166 (487)
...+|++|+|+|.|.++|...... .+|. ...|+|.+..
T Consensus 160 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~T~~~~ 201 (234)
T 3f7q_A 160 RMLLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQPKR 201 (234)
T ss_dssp CEEEEECCCTTCCEEEEEEEEETTEECCCEEEEECGGGSCCC
T ss_pred eEEEeCCCCCCCeEEEEEEEECCCccCCCcCceeEeecCCCC
Confidence 467899999999999999543322 3444 4678886654
|
| >3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=87.07 E-value=1.6 Score=39.31 Aligned_cols=76 Identities=12% Similarity=0.063 Sum_probs=41.7
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCC-CCceEEEEEEEEeeeecCCCCCCcccc
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRS-SLTYQAEGYSLVYNQLYPPDGLQNYTS 125 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~-~~~~~~~g~~~~~~~~~~~~g~~~~~~ 125 (487)
+..|..+++.....++++.|+|...... .....-.|+|...+. ..+..+.- + .
T Consensus 110 p~pP~~l~v~~~~~~~~l~l~W~~P~~~---------~~~l~yev~y~~~~~~~~w~~~~~------------~-----~ 163 (206)
T 3v6o_A 110 PLPPSSVKAEITINIGLLKISWEKPVFP---------ENNLQFQIRYGLSGKEVQWKMYEV------------Y-----D 163 (206)
T ss_dssp CCCCCSCEEEEETTTTEEEEEC-----------------CEEEEEEEEESSSSCCCEEEEE------------C-----C
T ss_pred CCCCCceEeEEecCCCeEEEEECCCCCC---------CCcEEEEEEEEECCCCCceEEEec------------c-----c
Confidence 3458888887765578999999875321 001234566766542 12221110 0 0
Q ss_pred CcEEEEEeCCCCCCCEEEEEEec
Q 039280 126 GIIHHVLITGLQPNTLYEYECGD 148 (487)
Q Consensus 126 ~~~h~v~l~gL~P~T~Y~Y~vg~ 148 (487)
.-...+.|.+|+|+|.|..||..
T Consensus 164 ~~~~~~~l~~L~p~t~Y~vqVRa 186 (206)
T 3v6o_A 164 AKSKSVSLPVPDLCAVYAVQVRC 186 (206)
T ss_dssp ---CEEEECCSCTTSCEEEEEEE
T ss_pred CcceeEEeecCCCCCEEEEEEEE
Confidence 01235789999999999999953
|
| >1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A | Back alignment and structure |
|---|
Probab=86.26 E-value=3.2 Score=39.97 Aligned_cols=92 Identities=14% Similarity=-0.008 Sum_probs=53.0
Q ss_pred CCCCceEEEeecc-CCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCcccc
Q 039280 47 GFQPEQIFVSLSA-RYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTS 125 (487)
Q Consensus 47 ~~~P~qi~l~~~~-~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~ 125 (487)
+..|..+++.... +++++.|+|.-....... . ....=.|+|.......+..+.- .
T Consensus 197 P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~-----~-~~~~Y~V~yr~~~~~~W~~~~~------------------~ 252 (325)
T 1n26_A 197 PDPPANITVTAVARNPRWLSVTWQDPHSWNSS-----F-YRLRFELRYRAERSKTFTTWMV------------------K 252 (325)
T ss_dssp CCCCEEEEEEECTTCTTCEEEEEECCTTCCCS-----S-SCEEEEEEEEETTCSCCEEEEC------------------G
T ss_pred CCCCcceEEEEecCCCCEEEEEECCCCccCCC-----c-EeEEEEEEEEeCCCCCCEEEcc------------------c
Confidence 4568888887754 467999999876421000 0 0013456776654332322110 0
Q ss_pred CcEEEEEeCCCCCCCEEEEEEecCCC------CCcCceEEEEc
Q 039280 126 GIIHHVLITGLQPNTLYEYECGDPSI------SAMSSSHYFRT 162 (487)
Q Consensus 126 ~~~h~v~l~gL~P~T~Y~Y~vg~~~~------~~~s~~~~F~T 162 (487)
..-..++|.+|+|+|.|..||..... ..||+...++|
T Consensus 253 ~~~~~~~l~~L~p~t~Y~~rVrA~n~~g~G~~S~wS~~~~~~~ 295 (325)
T 1n26_A 253 DLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEAMGTP 295 (325)
T ss_dssp GGCSEEEESSCCTTCCEEEEEEEEETTTBSCCCCCCCCEEECC
T ss_pred CCceEEEEeCCCCCCeEEEEEEEecCCCCCCCcCCCCccceec
Confidence 01236779999999999999954321 24566666655
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=86.00 E-value=4.8 Score=35.38 Aligned_cols=91 Identities=8% Similarity=-0.062 Sum_probs=48.9
Q ss_pred CCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCC-ceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 49 QPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSL-TYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 49 ~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~-~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
.|..+++.-.. ++++.|+|......... + ....=.|+|....... ..... . . ...
T Consensus 107 ~P~~~~~~~~~-~~sv~l~W~~p~~~~~n-----g-~i~~Y~v~~~~~~~~~~~~~~~-----~------~------~~~ 162 (205)
T 1cfb_A 107 NPDNVVGQGTE-PNNLVISWTPMPEIEHN-----A-PNFHYYVSWKRDIPAAAWENNN-----I------F------DWR 162 (205)
T ss_dssp CCSCCEEECSS-TTCEEEECCCCCGGGTC-----S-SSCEEEEEEEESSTTCCCEEEE-----E------C------CTT
T ss_pred CCeeeEeecCC-CCeEEEEEECCCccccC-----C-CceEEEEEEEECCCCCCcEEEE-----e------c------CCC
Confidence 56777765433 67999999765410000 0 0123456666554322 11110 0 0 001
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCC---C-cCceEEEEcC
Q 039280 128 IHHVLITGLQPNTLYEYECGDPSIS---A-MSSSHYFRTM 163 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~~~---~-~s~~~~F~T~ 163 (487)
...++|++|+|+|.|.+||...+.. . .|+...++|.
T Consensus 163 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~ss~~v~~~T~ 202 (205)
T 1cfb_A 163 QNNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSG 202 (205)
T ss_dssp CCEEEECSCCSSCEEEEEEEEEETTEECSSCCCCEEEESS
T ss_pred ccEEEEcCCCCCcEEEEEEEEEcCCCcCCCCCCcEEEecC
Confidence 2467889999999999999543322 2 3445556654
|
| >2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A | Back alignment and structure |
|---|
Probab=85.92 E-value=1.3 Score=34.86 Aligned_cols=20 Identities=25% Similarity=0.235 Sum_probs=17.3
Q ss_pred EEEEeCCCCCCCEEEEEEec
Q 039280 129 HHVLITGLQPNTLYEYECGD 148 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~ 148 (487)
..+.|+||+|+|.|..+|..
T Consensus 59 ~s~~l~~L~PgT~Y~V~v~a 78 (95)
T 2h41_A 59 TSVNIPDLLPGRKYIVNVYQ 78 (95)
T ss_dssp CEEEECSCCTTCEEEEEEEE
T ss_pred cEEEECCCCCCCEEEEEEEE
Confidence 47889999999999988854
|
| >2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=85.69 E-value=1.1 Score=46.43 Aligned_cols=96 Identities=18% Similarity=0.112 Sum_probs=55.7
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
+..|..+++... .++++.|+|.......+. ...-.|+|.......... . .... +. ..
T Consensus 387 P~PP~nl~v~~~-s~~sl~LsW~pP~~~~g~--------~l~YeV~Yr~~~~~~w~~-~---~~~~------~~----~~ 443 (488)
T 2q7n_A 387 PHDPTSLKVKDI-NSTVVTFSWYLPGNFTKI--------NLLCQIEICKANSKKEVR-N---ATIR------GA----ED 443 (488)
T ss_dssp CCCCEEEEEEEC-STTCEEEEEEEEEECSSS--------EEEEEEEEBCTTSCCEEE-E---EEEE------CC----EE
T ss_pred CCCCeEEEEEec-CCCEEEEEEeCCCCCCCc--------ceEEEEEEEECCCCCceE-E---EEEe------cC----CC
Confidence 456888887653 478999999876421110 112346676554322111 0 0010 00 01
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCC--C---CCcCceEEEEcCCC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPS--I---SAMSSSHYFRTMPV 165 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~--~---~~~s~~~~F~T~p~ 165 (487)
-.+.+.|.+|+|+|.|..||.... . +.||+...|+|++.
T Consensus 444 ~~~~v~l~~L~P~T~Y~~rVRA~~~g~G~WS~WS~~v~~~T~e~ 487 (488)
T 2q7n_A 444 STYHVAVDKLNPYTAYTFRVRCSSKTFWKWSRWSDEKRHLTTEA 487 (488)
T ss_dssp EEEEEEECSCCSSCCBBCCEEEEESSCSSCCCCCCCCCBCCCCC
T ss_pred cEEEEEeCCCCCCceEEEEEEEEECCCCCCCCCcCCEeEECCCC
Confidence 246679999999999999885322 1 25777788888753
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=85.60 E-value=3.4 Score=36.62 Aligned_cols=22 Identities=18% Similarity=0.297 Sum_probs=18.6
Q ss_pred cEEEEEeCCCCCCCEEEEEEec
Q 039280 127 IIHHVLITGLQPNTLYEYECGD 148 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~ 148 (487)
-...++|++|+|+|.|.|||..
T Consensus 68 ~~~~~~i~~L~p~t~Y~~~V~A 89 (214)
T 2ibg_A 68 KSFTASVTDLKPQHTYRFRILA 89 (214)
T ss_dssp EEEEEEECSCCTTCEEEEEEEE
T ss_pred cceeEEecCCcCCCEEEEEEEE
Confidence 3456789999999999999964
|
| >3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A* | Back alignment and structure |
|---|
Probab=85.17 E-value=2.1 Score=43.68 Aligned_cols=75 Identities=19% Similarity=0.177 Sum_probs=45.1
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
..|..+|+.=.. ++|++|+|..... +. ...=.|+|.......... .... +.-
T Consensus 371 ~~~~~l~~~~~~-~~s~~l~W~~p~~--~~--------~~~y~v~y~~~~~~~~~~----~~~~-------------~~~ 422 (461)
T 3csg_A 371 SVPTNLEVVAAT-PTSLLISWDASYS--SS--------VSYYRITYGETGGNSPVQ----EFTV-------------PGS 422 (461)
T ss_dssp CSSCCCEEEEEC-SSCEEEECCCTTG--GG--------CSEEEEEEEETTCCSCCE----EEEE-------------ETT
T ss_pred CCCcceEEeccC-CCeEEEEecCCCC--Cc--------ceEEEEEEEECCCCccce----EEEe-------------cCC
Confidence 468888886655 7899999966411 00 123456666553211000 0000 112
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC
Q 039280 128 IHHVLITGLQPNTLYEYECGDPS 150 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~ 150 (487)
-.+++|+||+|||.|..+|....
T Consensus 423 ~~~~~i~~L~p~t~Y~~~v~a~~ 445 (461)
T 3csg_A 423 KSTATISGLSPGVDYTITVYAYS 445 (461)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEC
T ss_pred CceEEecCCCCCCEEEEEEEEEe
Confidence 35799999999999999997544
|
| >2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C* | Back alignment and structure |
|---|
Probab=84.98 E-value=4.1 Score=36.24 Aligned_cols=87 Identities=9% Similarity=0.137 Sum_probs=52.0
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
+..|..+++.... ...+.|+|...... ..-.-.|+|....+..+..+.. .
T Consensus 99 P~pP~~l~~~~~~-~~~l~l~W~~p~~~----------~~l~yev~y~~~~~~~w~~~~~-------------------~ 148 (199)
T 2b5i_C 99 PWAPENLTLHKLS-ESQLELNWNNRFLN----------HCLEHLVQYRTDWDHSWTEQSV-------------------D 148 (199)
T ss_dssp CCCCEEEEEEEEE-TTEEEEEEECSSCS----------TTCEEEEEEEETTCSSCEEEEE-------------------C
T ss_pred cCCCcEEEEEECC-CCCEEEEECCCCCC----------CceEEEEEEeecCCcccEEEec-------------------c
Confidence 3458888888765 36899999886421 0123468888765443332210 0
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCC------CC---CcCceEEEEcC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPS------IS---AMSSSHYFRTM 163 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~------~~---~~s~~~~F~T~ 163 (487)
......|.+|.|++.|..||.... .+ .||+...|.|.
T Consensus 149 ~~~~~~l~~l~p~~~Y~vqVR~~~~~~~~~~g~WSeWS~~~~~~t~ 194 (199)
T 2b5i_C 149 YRHKFSLPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGSN 194 (199)
T ss_dssp SSCEEEECSCCTTSCEEEEEEEECCSSSCCCCCCCCCCCCEEC---
T ss_pred CceEEEecCCCCCcEEEEEEEEeccCCcCcCCeECCCCCCEEecCC
Confidence 123567899999999999995433 12 45555666653
|
| >1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=84.88 E-value=3.2 Score=33.55 Aligned_cols=35 Identities=11% Similarity=0.021 Sum_probs=25.7
Q ss_pred EEEeCCCCCCCEEEEEEecCC---CCCcCceEEEEcCCC
Q 039280 130 HVLITGLQPNTLYEYECGDPS---ISAMSSSHYFRTMPV 165 (487)
Q Consensus 130 ~v~l~gL~P~T~Y~Y~vg~~~---~~~~s~~~~F~T~p~ 165 (487)
.+.+. |+|+|.|.+||..-+ .+.+|+...|+|...
T Consensus 74 ~~~~~-L~~~t~Y~~~V~A~n~~G~Gp~S~~v~~~T~~~ 111 (117)
T 1wj3_A 74 SAELV-LPIKEDYIIEVKATTDGGDGTSSEQIRIPRITS 111 (117)
T ss_dssp EEEEE-CCCSSCEEEEEEEEESSCCCCBCCCEEECCCCC
T ss_pred EEEEE-CCCCCEEEEEEEEECCCccCCCCCCEEEEcCCC
Confidence 56666 999999999995322 235777888988754
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=84.87 E-value=3.2 Score=40.39 Aligned_cols=86 Identities=15% Similarity=0.029 Sum_probs=49.1
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCC-CCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRS-SLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~-~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
..|..+.+.-.. .+++.|+|...... ...=.|+|..... ...... ... .
T Consensus 279 ~~P~~l~~~~~~-~~sv~l~W~~p~~~-----------~~~Y~v~~~~~~~~~~~~~~-----~~~-------------~ 328 (375)
T 3t1w_A 279 DSPTGIDFSDIT-ANSFTVHWIAPRAT-----------ITGYRIRHHPEHFSGRPRED-----RVP-------------H 328 (375)
T ss_dssp CCCEEEEEESCC-SSCEEEEEECCSSC-----------CSEEEEEEEETTCCSSCEEE-----EEE-------------T
T ss_pred CCCCccEeeecc-CCEEEEEECCCCcc-----------eeeEEEEEEECCCCCcceeE-----EcC-------------C
Confidence 457777764333 57899999774311 1234567766543 111111 110 1
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCCCCCcCc--eEEEEcC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPSISAMSS--SHYFRTM 163 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~~~~~s~--~~~F~T~ 163 (487)
-....+|+||+|+|.|.++|......+.|+ ...++|+
T Consensus 329 ~~~~~~i~~L~p~t~Y~~~V~A~~~~G~s~p~s~~~~~~ 367 (375)
T 3t1w_A 329 SRNSITLTNLTPGTEYVVSIVALNGREESPLLIGQQSTV 367 (375)
T ss_dssp TCCEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECC
T ss_pred CccEEEECCCCCCCEEEEEEEEECCCCCCCceeeeeEEe
Confidence 123578999999999999996544334444 3445554
|
| >3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.40 E-value=1.3 Score=45.90 Aligned_cols=95 Identities=17% Similarity=0.083 Sum_probs=56.5
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
+..|..+++... .++++.|+|.......+ ..-.-.|+|....+..... .++ ..+. ..
T Consensus 382 P~PP~nl~v~~~-~stsl~LsW~~P~~~~~--------~~L~YeVrYr~~~~~~~~~------~vs----v~~~----~~ 438 (483)
T 3e0g_A 382 PHTPTSFKVKDI-NSTAVKLSWHLPGNFAK--------INFLCEIEIKKSNSVQEQR------NVT----IQGV----EN 438 (483)
T ss_dssp CCCCEEEEECCS-SSSSCCEEEECCSCCTT--------SBCCCEEEEECSSSCCCEE------ECC----CBCC----SS
T ss_pred CCCCeeeEEEEe-cCCeEEEEECCCCCCCC--------ceEEEEEEEEECCCCCceE------EEE----Eecc----CC
Confidence 456888887643 36889999987642100 0123568887765422111 010 0110 01
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCCC-----CCcCceEEEEcCC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPSI-----SAMSSSHYFRTMP 164 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~~-----~~~s~~~~F~T~p 164 (487)
-.+.+.|.+|+|+|.|..||..... ..||+...|+|+.
T Consensus 439 ~~~s~~l~~L~PgT~Y~vrVRA~~~g~g~WSeWS~~~~f~T~E 481 (483)
T 3e0g_A 439 SSYLVALDKLNPYTLYTFRIRCSTETFWKWSKWSNKKQHLTTE 481 (483)
T ss_dssp SBCCCCCCSCCSSSSCEEEEECCCSSCCCCCCCCCCCCCCCCC
T ss_pred ceeEEEEeccCCCcEEEEEEEEeeCCCCCcCCCCCceeeECCC
Confidence 2345778999999999999975422 2577778898864
|
| >2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=82.56 E-value=5.8 Score=36.90 Aligned_cols=89 Identities=10% Similarity=0.148 Sum_probs=53.8
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
+..|..+++.... ...+.|+|...... ..-.-.|+|....+..+..+.. .
T Consensus 137 P~PP~nl~v~~~~-~~~l~l~W~~P~~~----------~~L~Yevry~~~~~~~W~~~~~-----------~-------- 186 (247)
T 2erj_C 137 PWAPENLTLHKLS-ESQLELNWNNRFLN----------HCLEHLVQYRTDWDHSWTEQSV-----------D-------- 186 (247)
T ss_dssp CCCCEEEEEEESS-SSCEEEEEECSSCC----------TTEEEEEEEECSSCSSCEEEEE-----------C--------
T ss_pred eCCCCeEEEEECC-CCcEEEEECCCCCC----------CcEEEEEEEeeCCCCCCEEEec-----------C--------
Confidence 3458888888664 36899999886421 0112357887765543333210 0
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCC------CC---CcCceEEEEcCCC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPS------IS---AMSSSHYFRTMPV 165 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~------~~---~~s~~~~F~T~p~ 165 (487)
......|.+|+|++.|..||.... .+ .||+...|.|.+.
T Consensus 187 ~~~~~~l~~L~p~~~Y~vqVR~k~~~~~~~~g~WSeWS~~~~~~t~~~ 234 (247)
T 2erj_C 187 YRHKFSLPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGSNTS 234 (247)
T ss_dssp SSCEEEESCCCTTSCEEEEEEEEECSSSCCCCCCCCCCCCEEECC---
T ss_pred CceEEEecCCCCCCEEEEEEEEEeCCCCCCCCccCCCCcCEEEECCCC
Confidence 113567899999999999995432 12 5666778887544
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=82.54 E-value=4.9 Score=42.44 Aligned_cols=81 Identities=16% Similarity=0.112 Sum_probs=48.6
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
..|....++-.. .++++++|.-....-|..| ..=.||+...++..+..+. +. . ..
T Consensus 11 ~pP~~P~v~~~~-~~sv~L~W~~P~~DGgs~I-------~~Y~vE~~~~~~~~W~~v~-~~---~-------------~t 65 (573)
T 3uto_A 11 EPPRFPIIENIL-DEAVILSWKPPALDGGSLV-------TNYTIEKREAMGGSWSPCA-KS---R-------------YT 65 (573)
T ss_dssp CCCEEEEEEEEC-SSCEEEEEECCSCCSSSCC-------CEEEEEEEESSSCCCEEEE-EE---S-------------SS
T ss_pred ccCCCCEEEEee-CCEEEEEECCCCcCCCCcc-------cEEEEEEEECCCCceEEec-cc---c-------------CC
Confidence 346655554433 5899999987542211111 2346777777766665542 11 0 01
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCcC
Q 039280 128 IHHVLITGLQPNTLYEYECGDPSISAMS 155 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~~~~~s 155 (487)
..+++||.||+.|.+||...+..++|
T Consensus 66 --~~~V~~L~~g~~Y~FRV~A~N~~G~s 91 (573)
T 3uto_A 66 --YTTIEGLRAGKQYEFRIIAENKHGQS 91 (573)
T ss_dssp --EEEECCCCTTCEEEEEEEEEETTEEC
T ss_pred --EEEeCCCCCCCcEeEEEEEEcCceEc
Confidence 35689999999999999755433444
|
| >1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A | Back alignment and structure |
|---|
Probab=82.22 E-value=2.1 Score=39.51 Aligned_cols=94 Identities=10% Similarity=0.033 Sum_probs=51.4
Q ss_pred CCCCceEEEeeccC-C----CcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCC
Q 039280 47 GFQPEQIFVSLSAR-Y----DSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQ 121 (487)
Q Consensus 47 ~~~P~qi~l~~~~~-~----~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~ 121 (487)
...|..+.+.+... . .++.|+|........ +.+-....-.|+|....+..+....
T Consensus 131 p~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~~----~~g~~~l~Yevry~~~~~~~w~~~~---------------- 190 (236)
T 1axi_B 131 PDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADI----QKGWMVLEYELQYKEVNETKWKMMD---------------- 190 (236)
T ss_dssp CCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCT----TTTSCCEEEEEEEEETTCSSCEECC----------------
T ss_pred cCCCcccEEEEEecccCCCCceEEEEECCCCCccc----cCCceeeEEEEEEEECCCCceEEEe----------------
Confidence 45588887665442 2 349999987642100 0000011345666655432221110
Q ss_pred ccccCcEEEEEeCCCCCCCEEEEEEecCCC-----CCcCceEEEEcC
Q 039280 122 NYTSGIIHHVLITGLQPNTLYEYECGDPSI-----SAMSSSHYFRTM 163 (487)
Q Consensus 122 ~~~~~~~h~v~l~gL~P~T~Y~Y~vg~~~~-----~~~s~~~~F~T~ 163 (487)
...-..+.|.+|+|+|+|..||..... ..||+...|+|+
T Consensus 191 ---~~~~~~~~l~~L~p~t~Y~vqVRa~~~~gg~ws~WS~~~~~~~p 234 (236)
T 1axi_B 191 ---PILTTSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 234 (236)
T ss_dssp ---CBSSSEEEEEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred ---ccCCCEEEEeccCCCCEEEEEEEEEECCCCCcCCCCCCEEEECC
Confidence 001246788999999999999964322 256667777764
|
| >3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=81.02 E-value=8.9 Score=34.71 Aligned_cols=101 Identities=14% Similarity=0.113 Sum_probs=54.2
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
...|..+.+.. .+.+.|+|........ ...+. ..-.-.|+|....+.-........ .. ..+
T Consensus 101 p~PP~nltv~~---~~~l~lsW~~P~~~p~--~~~~~-~~L~Yevryr~~~~~W~~~~~~~~--~~-----------~~~ 161 (219)
T 3tgx_A 101 PAPPFDVTVTF---SGQYQISWRSDYEDPA--FYMLK-GKLQYELQYRNRGDPWAVSPRRKL--IS-----------VDS 161 (219)
T ss_dssp CCCCEEEEEEE---SSSEEEEEECGGGSGG--GGGGT-TSEEEEEEEEETTSCTTSCCEEEE--EC-----------SSC
T ss_pred eCCCCceEEEe---CCCEEEEEeCCcCCcc--ccccc-cCEEEEEEEecCCCCceeccccee--Ee-----------cCC
Confidence 45588887773 3689999988642100 00000 011345677666532111000110 00 011
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCCC------C---CcCceEEEEcCCCC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPSI------S---AMSSSHYFRTMPVS 166 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~~------~---~~s~~~~F~T~p~~ 166 (487)
....+.+.+|.|+|.|..||..... + .||+...|+|.+..
T Consensus 162 ~~~~~~~~~L~p~t~Y~vqVRa~~~~g~~~~G~WSeWS~~~~~~T~~~~ 210 (219)
T 3tgx_A 162 RSVSLLPLEFRKDSSYELQVRAGPMPGSSYQGTWSEWSDPVIFQTQSEE 210 (219)
T ss_dssp SEEEECTTSSCSSCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCC--
T ss_pred CEEEEEeccCCCCCEEEEEEEEeeCCCCCCCCcCcCCCCCeEEECCchh
Confidence 3456778899999999999943211 2 46788999998653
|
| >3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C* | Back alignment and structure |
|---|
Probab=80.41 E-value=6.6 Score=37.37 Aligned_cols=102 Identities=11% Similarity=0.019 Sum_probs=51.4
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
+..|..+++... .+++.|+|.......+ ....=.|+|....+..+............ ....+ ...
T Consensus 200 P~pP~~l~~~~~--~~~l~lsW~~P~~~~~--------~~l~Yev~y~~~~~~~w~~~~~~~~~c~~-~~~~~----~~~ 264 (314)
T 3bpo_C 200 PDPPHIKNLSFH--NDDLYVQWENPQNFIS--------RCLFYEVEVNNSQTETHNVFYVQEAKCEN-PEFER----NVE 264 (314)
T ss_dssp CCCCEEEEEEEE--TTEEEEEEECCTTCCG--------GGEEEEEEEEC--CCCEEEEEESCCCCCC-TTSSC----CCS
T ss_pred eCCCCEEEEEEc--CCcEEEEEeCCCccCC--------ceEEEEEEEEECCCCcceEEecccccccc-ccccc----ccC
Confidence 456888888733 4699999987642100 00123466765543322111000000000 00000 012
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCC-------CC---CcCceEEEEcC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPS-------IS---AMSSSHYFRTM 163 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~-------~~---~~s~~~~F~T~ 163 (487)
....+.|.+|+|+|.|..||.... .+ .||+...|.+.
T Consensus 265 ~~~~~~l~~L~p~t~Y~~qVra~~~~~~~~~~g~WS~WS~~~~~~~~ 311 (314)
T 3bpo_C 265 NTSCFMVPGVLPDTLNTVRIRVKTNKLCYEDDKLWSNWSQEMSIGKK 311 (314)
T ss_dssp SEEEEEEESCCTTSCEEEEEEEEECTTTSCCCCCCCCCCCCEEESCC
T ss_pred CceEEEEccCCCCCEEEEEEEeeecccccCCCCeeCCCCCCeEeccc
Confidence 346788999999999999995432 12 45556666554
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 487 | ||||
| d2qfra2 | 312 | d.159.1.1 (A:121-432) Plant purple acid phosphatas | 7e-64 | |
| d1utea_ | 302 | d.159.1.1 (A:) Mammalian purple acid phosphatase { | 1e-17 | |
| d2qfra1 | 112 | b.1.12.1 (A:9-120) Purple acid phosphatase, N-term | 2e-16 | |
| d1xzwa1 | 119 | b.1.12.1 (A:1-119) Purple acid phosphatase, N-term | 4e-15 | |
| d2nxfa1 | 320 | d.159.1.12 (A:3-322) Uncharacterized C17orf48 homo | 1e-06 | |
| d2yvta1 | 257 | d.159.1.6 (A:4-260) Uncharacterized protein Aq_195 | 2e-06 | |
| d2hy1a1 | 256 | d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide pho | 1e-04 | |
| d3d03a1 | 271 | d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ | 0.002 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 207 bits (528), Expect = 7e-64
Identities = 109/327 (33%), Positives = 152/327 (46%), Gaps = 70/327 (21%)
Query: 166 SGPSDYPNRIAVVGDLGLTYNTTTTVAHLM--SNHPDLLLLIGDLSYADLYLTNGTKSSC 223
+G D P ++GDLG ++++ TT++H +L +GDLSYAD Y +
Sbjct: 2 TGL-DVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNH------ 54
Query: 224 YLCQSIESPIQETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIE---RQAENQTFAAYSS 280
RWD WGR+ + V+ P + G HEIE E + F +S
Sbjct: 55 -------------DNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSY 101
Query: 281 RFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYIDYDKSSDQYKWLESDLGDVDREVTPWL 340
R+ P E S S+S +YS H ++LS+Y Y + + QY WL+ +L V R TPWL
Sbjct: 102 RYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWL 161
Query: 341 IAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSL--- 397
I H P Y++Y+ H+ E E MR + E Y VD+VF GHVHAYERS RV N +
Sbjct: 162 IVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKIT 221
Query: 398 --------DPCGPVYILVGDGGNVEGLDIVHADEPGNCPEPSTTPDMGGSCAFNFTSGPA 449
D PVYI +GD GN +D
Sbjct: 222 NGLCTPVKDQSAPVYITIGDAGNYGVID-------------------------------- 249
Query: 450 SGKFCWDRQPDYSAYRESSFGHGILEV 476
QP+YSA+RE+SFGHG+ ++
Sbjct: 250 --SNMIQPQPEYSAFREASFGHGMFDI 274
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Score = 81.4 bits (199), Expect = 1e-17
Identities = 55/313 (17%), Positives = 90/313 (28%), Gaps = 66/313 (21%)
Query: 174 RIAVVGDLGLTYNTTTTVAHLMSN-----------HPDLLLLIGDLSYADLYLTNGTKSS 222
R VGD G N A M+N D +L +GD Y
Sbjct: 6 RFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGV-------- 57
Query: 223 CYLCQSIESPIQETYQPRWDYWGR--YMQPLVSNVPTMVIEGEHEIERQAENQT-FAAYS 279
+ R+ + P + NVP V+ G H+ Q ++ S
Sbjct: 58 -----------HDAKDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKIS 106
Query: 280 SRFAFPSEESGSSSSLYYSFNAGGIHFVML-----------------SAYIDYDKSSDQY 322
R+ FPS + + ML + + Q
Sbjct: 107 KRWNFPSPYY--RLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQL 164
Query: 323 KWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGH 382
W++ L +++ A H P +S A + C+ ++ LL + V GH
Sbjct: 165 AWIKKQL---AAAKEDYVLVAGHYPVWS--IAEHGPTHCLVKQLLPLLTTHKVTAYLCGH 219
Query: 383 VHAYERSNRVYNYSLDPCGPVYILVGDGGNVEGLDIVHADEPGNCPEPSTTPD--MGGSC 440
H + D G ++L G G ++ P + +GG
Sbjct: 220 DHNLQYLQ-------DENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFA 272
Query: 441 AFNFTSGPASGKF 453
T S +
Sbjct: 273 YVEITPKEMSVTY 285
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 112 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 73.0 bits (179), Expect = 2e-16
Identities = 33/135 (24%), Positives = 50/135 (37%), Gaps = 28/135 (20%)
Query: 34 DLPY---VLQNNAQGEGFQPEQIFVSLSAR-YDSVWISWITGEFQIGDNISPLDPELVQS 89
D+P V + P+Q+ ++ ++ ISW+T + E S
Sbjct: 2 DMPLDSDVFRVPP--GYNAPQQVHITQGDLVGRAMIISWVTMD------------EPGSS 47
Query: 90 IVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGIIHHVLITGLQPNTLYEYECGDP 149
V + ++ A+G Y NY+SG IHH I L+ NT Y YE G
Sbjct: 48 AVRYWSEKNGRKRIAKGKMSTYRF-------FNYSSGFIHHTTIRKLKYNTKYYYEVGL- 99
Query: 150 SISAMSSSHYFRTMP 164
+ F T P
Sbjct: 100 --RNTTRRFSFITPP 112
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} Length = 119 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Score = 69.6 bits (170), Expect = 4e-15
Identities = 28/117 (23%), Positives = 41/117 (35%), Gaps = 22/117 (18%)
Query: 49 QPEQIFVSLSAR-YDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGY 107
P+Q+ ++ V ISW T + + V++ S +A G
Sbjct: 24 APQQVHITQGDYEGRGVIISWTTP-----------YDKAGANKVFYWSENSKSQKRAMGT 72
Query: 108 SLVYNQLYPPDGLQNYTSGIIHHVLITGLQPNTLYEYECGDPSISAMSSSHYFRTMP 164
+ Y NYTS IHH I L+ +T Y Y G +F T P
Sbjct: 73 VVTYKY-------YNYTSAFIHHCTIKDLEYDTKYYYRLGF---GDAKRQFWFVTPP 119
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Score = 47.8 bits (112), Expect = 1e-06
Identities = 24/235 (10%), Positives = 52/235 (22%), Gaps = 32/235 (13%)
Query: 191 VAHLMSNHPDLLLLIGDLSYAD--------------------------LYLTNGTKSSCY 224
V ++ +GD+ N +
Sbjct: 42 VLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELDACSVDVHHVWGNHEFYNFS 101
Query: 225 LCQSIESPIQETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAF 284
+ S + + D + + + A + +
Sbjct: 102 RPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEK 161
Query: 285 PSEESGSSSSLYYSFNAGGIHFVMLS-----AYIDYDKSSDQYKWLESDLGDVDREVTPW 339
+ + ++ + V + + S Q +WL++ L D +
Sbjct: 162 HTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERV 221
Query: 340 LIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYN 394
LI H P + + + L + V GH H R
Sbjct: 222 LIF-SHLPVHPCAADPICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTDSSG 275
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Score = 47.0 bits (110), Expect = 2e-06
Identities = 22/228 (9%), Positives = 65/228 (28%), Gaps = 6/228 (2%)
Query: 172 PNRIAVVGDLGLTYNTTTTVAHLMSNH-PDLLLLIGDL-SYADLYLTNGTKSSCYLCQSI 229
P ++ + + ++ + +++ PD+L+++G++ L +
Sbjct: 2 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNR 61
Query: 230 ESPIQETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEES 289
+ + + + + V T V+ G+++ + + + +
Sbjct: 62 KVIHENEHYIIETLDKFFREIGELGVKTFVVPGKNDAPLKIFLRAAYEAETAYPNIRVLH 121
Query: 290 GSSSSLYYSFNAGGIHFVMLSAYIDYDKSSDQYKWLESDLGDVDREVTPW---LIAAWHP 346
+ F G ++ + D +W + E+ P I P
Sbjct: 122 EGFAGWRGEFEVIGFGGLLTEHEFEEDFVLKYPRWYVEYILKFVNELKPRRLVTIFYTPP 181
Query: 347 PWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVH-AYERSNRVY 393
+ ++ ++ GHV +E
Sbjct: 182 IGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVGKGHELVGNTI 229
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 41.3 bits (95), Expect = 1e-04
Identities = 29/208 (13%), Positives = 56/208 (26%), Gaps = 41/208 (19%)
Query: 190 TVAHLMSNH--PDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRY 247
+ L + PD ++ GDL+ E R
Sbjct: 35 LLEQLNQSGLRPDAIVFTGDLAD----------------------KGEPAAYRKLRGLVE 72
Query: 248 MQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFV 307
+ + G H+ + F +E+ S + L G+ +
Sbjct: 73 PFAAQLGAELVWVMGNHD-----------DRAELRKFLLDEAPSMAPLDRVCMIDGLRII 121
Query: 308 MLSAYI----DYDKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMR 363
+L + + + Q WL + ++A HPP S +
Sbjct: 122 VLDTSVPGHHHGEIRASQLGWLAEE--LATPAPDGTILALHHPPIPSVLDMAVTVELRDQ 179
Query: 364 VEMEDLLYYYGVDIVFNGHVHAYERSNR 391
+ +L V + GH+H +
Sbjct: 180 AALGRVLRGTDVRAILAGHLHYSTNATF 207
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Score = 37.4 bits (85), Expect = 0.002
Identities = 20/200 (10%), Positives = 52/200 (26%), Gaps = 36/200 (18%)
Query: 195 MSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYMQPLVSN 254
+ PD +++ GD+ G + + I + N
Sbjct: 38 LRERPDAVVVSGDIVN------CGRPEEYQVARQILGSL--------------------N 71
Query: 255 VPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYI- 313
P +I G H+ ++ + + + + + + + +
Sbjct: 72 YPLYLIPGNHD-DKALFLEYLQPLCPQLGSDANNM------RCAVDDFATRLLFIDSSRA 124
Query: 314 DYDKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECM--RVEMEDLLY 371
K + + + H P +A + C + +
Sbjct: 125 GTSKGWLTDETISWLEAQLFEGGDKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVER 184
Query: 372 YYGVDIVFNGHVHAYERSNR 391
+ + +F GH H+ +
Sbjct: 185 FPSLTRIFCGHNHSLTMTQY 204
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 487 | |||
| d2qfra2 | 312 | Plant purple acid phosphatase, catalytic domain {K | 100.0 | |
| d1utea_ | 302 | Mammalian purple acid phosphatase {Pig (Sus scrofa | 99.97 | |
| d2qfra1 | 112 | Purple acid phosphatase, N-terminal domain {Kidney | 99.91 | |
| d1xzwa1 | 119 | Purple acid phosphatase, N-terminal domain {Sweet | 99.89 | |
| d2hy1a1 | 256 | Rv0805 cyclic nucleotide phosphodiesterase {Mycoba | 99.87 | |
| d2nxfa1 | 320 | Uncharacterized C17orf48 homolog zgc:64213 {Zebraf | 99.84 | |
| d3d03a1 | 271 | Glycerophosphodiesterase GpdQ {Enterobacter aeroge | 99.83 | |
| d1uf3a_ | 228 | Hypothetical protein TT1561 {Thermus thermophilus | 99.63 | |
| d2yvta1 | 257 | Uncharacterized protein Aq_1956 {Aquifex aeolicus | 99.6 | |
| d1s3la_ | 165 | Putative phosphodiesterase MJ0936 {Methanococcus j | 99.13 | |
| d2a22a1 | 193 | Vacuolar protein sorting 29, VPS29 {Cryptosporidiu | 99.01 | |
| d1ii7a_ | 333 | Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 98.96 | |
| d1nnwa_ | 251 | Hypothetical protein PF1291 {Archaeon Pyrococcus f | 98.94 | |
| d1z2wa1 | 182 | Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus | 98.94 | |
| d3ck2a1 | 173 | Uncharacterized protein SP1879 {Streptococcus pneu | 98.91 | |
| d1su1a_ | 184 | Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 | 98.52 | |
| d1xm7a_ | 188 | Hypothetical protein aq_1666 {Aquifex aeolicus [Ta | 98.37 | |
| d1usha2 | 337 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.28 | |
| d3c9fa2 | 322 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.02 | |
| d2z1aa2 | 302 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 97.78 | |
| d1x5aa1 | 94 | Ephrin type-A receptor 1 {Mouse (Mus musculus) [Ta | 97.47 | |
| d1x5xa1 | 96 | Fibronectin type-III domain containing protein 3a, | 97.35 | |
| d1x4xa1 | 93 | Fibronectin type-III domain containing protein 3a, | 97.15 | |
| d1tdqa2 | 92 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 97.06 | |
| d1qg3a1 | 92 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 97.06 | |
| d1x5la1 | 98 | Ephrin type-A receptor 8 {Human (Homo sapiens) [Ta | 97.02 | |
| d1x5fa1 | 107 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.93 | |
| d1t70a_ | 255 | Putative phosphatase DR1281 {Deinococcus radiodura | 96.8 | |
| d2b5ib2 | 104 | Interleukin-2 receptor beta chain {Human (Homo sap | 96.77 | |
| d1fnfa1 | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.74 | |
| d1owwa_ | 93 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.73 | |
| d2djsa1 | 95 | Ephrin type-B receptor 1 {Human (Homo sapiens) [Ta | 96.72 | |
| d1x5ka1 | 111 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.69 | |
| d1x5za1 | 102 | Receptor-type tyrosine-protein phosphatase delta, | 96.61 | |
| d1uc6a_ | 109 | Ciliary neurotrophic factor receptor alpha {Human | 96.58 | |
| d1k85a_ | 88 | Fibronectin type III domain from chitinase A1. {Ba | 96.58 | |
| d2vkwa2 | 93 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 96.57 | |
| d1x5ja1 | 100 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.57 | |
| d1qr4a2 | 88 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 96.56 | |
| d1erna2 | 105 | Erythropoietin (EPO) receptor {Human (Homo sapiens | 96.55 | |
| d2z06a1 | 252 | Hypothetical protein TTHA0625 {Thermus thermophilu | 96.55 | |
| d2cuha1 | 102 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 96.54 | |
| d2haza1 | 101 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 96.53 | |
| d2d9qb2 | 105 | Granulocyte colony-stimulating factor (GC-SF) rece | 96.5 | |
| d1tena_ | 90 | Tenascin {Human (Homo sapiens) [TaxId: 9606]} | 96.49 | |
| d2b5ic1 | 95 | Cytokine receptor common gamma chain {Human (Homo | 96.49 | |
| d2ibga1 | 95 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 96.43 | |
| d1qr4a1 | 87 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 96.41 | |
| d1fnfa2 | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.38 | |
| d2crza1 | 97 | Fibronectin type-III domain containing protein 3a, | 96.36 | |
| d1x4ya1 | 101 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 96.35 | |
| d1tdqa1 | 93 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 96.34 | |
| d1fnha1 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.34 | |
| d2cuma1 | 93 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 96.34 | |
| d1x3da1 | 105 | Fibronectin type-III domain containing protein 3a, | 96.34 | |
| d2cuia1 | 101 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 96.34 | |
| d1fnfa3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.28 | |
| d1x5ga1 | 103 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.27 | |
| d1fnha3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.26 | |
| d1t71a_ | 281 | Hypothetical protein MPN349 {Mycoplasma pneumoniae | 96.21 | |
| d1x4za1 | 108 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 96.2 | |
| d1g5ba_ | 219 | lambda ser/thr protein phosphatase {Bacteriophage | 96.14 | |
| d1tdqa3 | 86 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 96.01 | |
| d3d48r2 | 104 | Prolactin receptor {Human (Homo sapiens) [TaxId: 9 | 95.96 | |
| d1iarb2 | 101 | Interleukin-4 receptor alpha chain {Human (Homo sa | 95.95 | |
| d1cfba1 | 100 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 95.94 | |
| d1j8ka_ | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.92 | |
| d2crma1 | 107 | Fibronectin type-III domain containing protein 3a, | 95.88 | |
| d1wfoa1 | 117 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 95.87 | |
| d1fnha2 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.85 | |
| d1f6fb2 | 103 | Prolactin receptor {Rat (Rattus norvegicus) [TaxId | 95.8 | |
| d1x5ha1 | 119 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 95.77 | |
| d2gysa2 | 114 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 95.64 | |
| d1wisa1 | 111 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 95.55 | |
| d1bqua2 | 115 | Cytokine receptor gp130 cytokine-binding domains { | 95.54 | |
| d1cd9b2 | 106 | Granulocyte colony-stimulating factor (GC-SF) rece | 95.52 | |
| d1x5ya1 | 98 | Myosin binding protein C, fast-type {Mouse (Mus mu | 95.49 | |
| d1uena_ | 125 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 95.4 | |
| d1va9a1 | 109 | Down syndrome cell adhesion molecule-like protein | 95.39 | |
| d2fnba_ | 95 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.37 | |
| d1ueya_ | 127 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 95.26 | |
| d1qg3a2 | 103 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 95.21 | |
| d1wf5a1 | 108 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 95.16 | |
| d1x5ia1 | 113 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 95.15 | |
| d1wfna1 | 106 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 95.06 | |
| d2ic2a1 | 107 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 94.85 | |
| d1v5ja_ | 108 | KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | 94.85 | |
| d1ujta_ | 120 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 94.84 | |
| d1uema_ | 117 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 94.82 | |
| d1wfua_ | 120 | Fibronectin type 3 and ankyrin repeat domains 1 pr | 94.58 | |
| d1n26a3 | 104 | Interleukin-6 receptor alpha chain, domains 2 and | 94.58 | |
| d1wk0a_ | 137 | Fibronectin type-III domain containing protein 3a, | 94.55 | |
| d1bpva_ | 104 | Type I titin module {Human (Homo sapiens) [TaxId: | 94.48 | |
| d2dn7a1 | 94 | Receptor-type tyrosine-protein phosphatase F, PTPR | 94.39 | |
| d1cfba2 | 105 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 93.76 | |
| d1wfta_ | 123 | Host cell factor 2, HCF-2 {Mouse (Mus musculus) [T | 93.64 | |
| d1fnaa_ | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 93.42 | |
| d1cd9b1 | 107 | Granulocyte colony-stimulating factor (GC-SF) rece | 93.23 | |
| d1axib2 | 106 | Growth hormone receptor {Human (Homo sapiens) [Tax | 92.47 | |
| d2gysa4 | 100 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 90.56 | |
| d2cspa1 | 117 | Rim binding protein 2 {Human (Homo sapiens) [TaxId | 90.0 | |
| d3d85d3 | 94 | The p40 domain of interleukin-12 (IL-12 beta chain | 88.43 | |
| d2dtge2 | 196 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 85.41 | |
| d1s95a_ | 324 | Serine/threonine protein phosphatase 5, PP5 {Human | 85.25 | |
| d1wj3a_ | 117 | Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxI | 85.02 | |
| d1bqua1 | 95 | Cytokine receptor gp130 cytokine-binding domains { | 84.41 | |
| d1fyhb1 | 98 | Interferon-gamma receptor alpha chain {Human (Homo | 84.4 | |
| d1y6kr1 | 99 | Interleukin-10 receptor 1, IL-10R1 {Human (Homo sa | 83.22 | |
| d1jk7a_ | 294 | Protein phosphatase-1 (PP-1) {Human (Homo sapiens) | 82.42 | |
| d3c5wc1 | 288 | Protein phosphatase 2A catalytic subunit alpha iso | 81.78 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=100.00 E-value=1.4e-55 Score=438.88 Aligned_cols=263 Identities=41% Similarity=0.765 Sum_probs=225.1
Q ss_pred CCcEEEEEecCCCCCChHHHHHHHH--HcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhh
Q 039280 171 YPNRIAVVGDLGLTYNTTTTVAHLM--SNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYM 248 (487)
Q Consensus 171 ~~~~f~v~gD~~~~~~~~~~l~~l~--~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~ 248 (487)
.|+||+++||+|.......++.+++ ..+|||||++||++|+++... ....+|+.|++.+
T Consensus 6 ~p~~F~v~GD~g~~~~~~~~~~~~~~~~~~pdfvl~~GDl~Y~~~~~~-------------------~~~~~wd~~~~~~ 66 (312)
T d2qfra2 6 VPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPN-------------------HDNVRWDTWGRFT 66 (312)
T ss_dssp CCEEEEEECSCCSBHHHHHHHHHHHHCSSCCSEEEECSCCCCGGGSGG-------------------GCTHHHHHHHHHH
T ss_pred CCEEEEEEeeCCCCCchHHHHHHHHHcCCCCCEEEECCCCCcCCCCcc-------------------cchHHHHHHHHHH
Confidence 4899999999998766666676654 358999999999999865321 1246899999999
Q ss_pred hccccCCCEEEecCCcccccCc---cchhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCcccCCCChHHHHHH
Q 039280 249 QPLVSNVPTMVIEGEHEIERQA---ENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYIDYDKSSDQYKWL 325 (487)
Q Consensus 249 ~~l~~~~P~~~v~GNHD~~~~~---~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~~~~~~~Q~~WL 325 (487)
+++.+.+|+|+++||||+.... ....|..|..+|.+|.+++....+.||+|++|+++||+||++..+..+.+|++||
T Consensus 67 ~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL 146 (312)
T d2qfra2 67 ERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWL 146 (312)
T ss_dssp HHHHTTSCEEECCCGGGTCCBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHH
T ss_pred HHHhhcceEEEecccccccccccccccccccchhhhccCCccccCCCCCceEEEEECCEEEEEeeccccccchHHHHHHH
Confidence 9998899999999999975432 2356788999999998877677788999999999999999998888889999999
Q ss_pred HHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceecccccCCcc--------
Q 039280 326 ESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSL-------- 397 (487)
Q Consensus 326 ~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~p~~~~~~-------- 397 (487)
+++|++++++++||+||++|+|+|++......+.+.+|+.|++||++|+|||||+||+|.|||++||+++++
T Consensus 147 ~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~Vdlv~~GH~H~YeRt~p~~~~~~~~~~~~~~ 226 (312)
T d2qfra2 147 KKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCT 226 (312)
T ss_dssp HHHHHTCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCS
T ss_pred HHHHHHHhhcCCCEEEEEccccccccCCCCcccchhHHHHHHHHHHHcCcEEEEEccCcceEEEeeccCCcccccCCccc
Confidence 999999988899999999999999987666556778899999999999999999999999999999987653
Q ss_pred ---CCCCcEEEEeCCccccCCcccccCCCCCCCCCCCCCCCCCCccccccccCCCCCCcccCCCCCccceecCCcceEEE
Q 039280 398 ---DPCGPVYILVGDGGNVEGLDIVHADEPGNCPEPSTTPDMGGSCAFNFTSGPASGKFCWDRQPDYSAYRESSFGHGIL 474 (487)
Q Consensus 398 ---~~~g~vyIv~G~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~r~~~~G~~~l 474 (487)
+++|++|||+|+||+.++.... ...++|.||+||+.+|||++|
T Consensus 227 ~~~~~~g~vyiv~G~gG~~~~~~~~----------------------------------~~~~~~~~s~~~~~~~G~~~l 272 (312)
T d2qfra2 227 PVKDQSAPVYITIGDAGNYGVIDSN----------------------------------MIQPQPEYSAFREASFGHGMF 272 (312)
T ss_dssp CEECTTSCEEEEECCSCTTSCCCCC----------------------------------BCSSCCTTEEEEECCCEEEEE
T ss_pred cccCCCcCEEEEECcCCCccccccc----------------------------------ccCCCCCeeEEEecCCCEEEE
Confidence 4789999999999987654321 124678999999999999999
Q ss_pred EEEccceeEEee
Q 039280 475 EVLISLSIALTT 486 (487)
Q Consensus 475 ~~~n~t~~~~~~ 486 (487)
+|+|+|||+||.
T Consensus 273 ~v~n~t~l~~~~ 284 (312)
T d2qfra2 273 DIKNRTHAHFSW 284 (312)
T ss_dssp EECSSSEEEEEE
T ss_pred EEEcCCeEEEEE
Confidence 999999999984
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.97 E-value=1.2e-30 Score=254.90 Aligned_cols=204 Identities=23% Similarity=0.341 Sum_probs=145.0
Q ss_pred CcEEEEEecCCCCCCh-----------HHHHHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHH
Q 039280 172 PNRIAVVGDLGLTYNT-----------TTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPR 240 (487)
Q Consensus 172 ~~~f~v~gD~~~~~~~-----------~~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~ 240 (487)
.+||+++||+|..... ..+.+.+++.+|||||++||++|.++... .++.+
T Consensus 4 ~~~F~vigD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfvl~~GD~vy~~g~~~-------------------~~~~~ 64 (302)
T d1utea_ 4 ILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHD-------------------AKDKR 64 (302)
T ss_dssp CEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSS-------------------TTCTH
T ss_pred CeEEEEEecCCCCCCcccccHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCCCc-------------------ccHHH
Confidence 6899999999876432 11233344569999999999999754211 12345
Q ss_pred HHHHHHhh-h-ccccCCCEEEecCCcccccCccc-hhhHHhhcccCCCCCCCCCCCcceEEEEe------CCEEEEEEcC
Q 039280 241 WDYWGRYM-Q-PLVSNVPTMVIEGEHEIERQAEN-QTFAAYSSRFAFPSEESGSSSSLYYSFNA------GGIHFVMLSA 311 (487)
Q Consensus 241 w~~~~~~~-~-~l~~~~P~~~v~GNHD~~~~~~~-~~~~~y~~~f~~P~~~~~~~~~~yYsf~~------g~v~fi~Ldt 311 (487)
|.++...+ . .....+|+++++||||+..+... ..+..+..++.+|. .||++.+ +.++|+++|+
T Consensus 65 ~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~ldt 136 (302)
T d1utea_ 65 FQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFPS--------PYYRLRFKIPRSNVSVAIFMLDT 136 (302)
T ss_dssp HHHHTTTTSCSGGGTTCCEEECCCHHHHHSCHHHHHHGGGTSTTEECCS--------SSEEEEEECTTSSCEEEEEECCH
T ss_pred HHHHHHHHhhhhhhcCCceEEeecccccccccccccchhhccccccCCC--------cccceeecccCCCCcEEEEEccc
Confidence 65544332 2 23578999999999998654221 11222333343442 3666664 3699999997
Q ss_pred cccC-----------------CCChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcC
Q 039280 312 YIDY-----------------DKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYG 374 (487)
Q Consensus 312 ~~~~-----------------~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~ 374 (487)
.... ....+|++||+++|++. +.+|+||++|+|+++.... ......+..|.+||++++
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~WL~~~L~~~---~~~~~iv~~h~~~~~~~~~--~~~~~~~~~~~~ll~~~~ 211 (302)
T d1utea_ 137 VTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAA---KEDYVLVAGHYPVWSIAEH--GPTHCLVKQLLPLLTTHK 211 (302)
T ss_dssp HHHHCCGGGSTTCSCCSCSCHHHHHHHHHHHHHHHHHC---CCSEEEEECSSCSSCCSSS--CCCHHHHHHTHHHHHHTT
T ss_pred eeEeecccccccccccccccchhHHHHHHHHHHHHHhh---ccCceEEEEeccccccCCC--CCchhhhhhhhHHHHhcC
Confidence 4210 02468999999999984 5689999999999976432 344567889999999999
Q ss_pred CcEEEeCccccceecccccCCccCCCCcEEEEeCCccccC
Q 039280 375 VDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDGGNVE 414 (487)
Q Consensus 375 VdlvlsGH~H~yeR~~p~~~~~~~~~g~vyIv~G~gG~~~ 414 (487)
|++||+||+|.|+|+. .++++.||++|+||...
T Consensus 212 v~~~~~GH~H~~~r~~-------~~~~~~~i~~g~g~~~~ 244 (302)
T d1utea_ 212 VTAYLCGHDHNLQYLQ-------DENGLGFVLSGAGNFMD 244 (302)
T ss_dssp CSEEEECSSSSEEEEE-------CTTCCEEEEECBSSCCC
T ss_pred ceEEEeCCCcceEEEe-------cCCccEEEEeCCCCCCC
Confidence 9999999999999985 46789999999988754
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.91 E-value=3.5e-24 Score=178.49 Aligned_cols=109 Identities=28% Similarity=0.333 Sum_probs=89.6
Q ss_pred CCCcc-cccCCCCCCCCCceEEEeeccCC-CcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEe
Q 039280 34 DLPYV-LQNNAQGEGFQPEQIFVSLSARY-DSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVY 111 (487)
Q Consensus 34 ~~~~~-~~~~~~~~~~~P~qi~l~~~~~~-~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~ 111 (487)
|||++ .+-..+++.++|+||||++++++ ++|+|+|+|.+. ...+.|+||++++.+..++.+....|
T Consensus 2 ~~p~~~~~~~~p~~~~~P~qvhlt~~~~~~tsm~VsW~T~~~------------~~~~~V~yg~~~~~~~~~a~~~~~~~ 69 (112)
T d2qfra1 2 DMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDE------------PGSSAVRYWSEKNGRKRIAKGKMSTY 69 (112)
T ss_dssp BCCTTSGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSS------------CCCCEEEEEESSSCCCEEEECEEECC
T ss_pred CCCCCCccccCCCCCCCCccEEEeCcCCCCCEEEEEEECCCC------------CCCcEEEEEECCCCCCcEEEEEEEEE
Confidence 67886 33334455899999999999876 899999999753 24689999999999999999887665
Q ss_pred eeecCCCCCCccccCcEEEEEeCCCCCCCEEEEEEecCCCCCcCceEEEEcCC
Q 039280 112 NQLYPPDGLQNYTSGIIHHVLITGLQPNTLYEYECGDPSISAMSSSHYFRTMP 164 (487)
Q Consensus 112 ~~~~~~~g~~~~~~~~~h~v~l~gL~P~T~Y~Y~vg~~~~~~~s~~~~F~T~p 164 (487)
.. .++..+++|+|+|+||+|+|+|+||||++ +||++++|+|+|
T Consensus 70 ~~-------~~~~~~~~h~v~Lt~L~P~T~Y~YrVG~~---~~S~~~~F~T~P 112 (112)
T d2qfra1 70 RF-------FNYSSGFIHHTTIRKLKYNTKYYYEVGLR---NTTRRFSFITPP 112 (112)
T ss_dssp BC-------SSCBCCEEEEEEECSCCTTCEEEEEECCS---SSCEEEEEECCC
T ss_pred Ee-------cccCCcEEEEEEECCCCCCCEEEEEECCC---CceeeEEEEcCC
Confidence 42 12456799999999999999999999975 699999999987
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Probab=99.89 E-value=5.7e-23 Score=172.98 Aligned_cols=110 Identities=27% Similarity=0.360 Sum_probs=88.2
Q ss_pred CCCCcc--cccCCCCCCCCCceEEEeeccCC-CcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEE
Q 039280 33 SDLPYV--LQNNAQGEGFQPEQIFVSLSARY-DSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSL 109 (487)
Q Consensus 33 ~~~~~~--~~~~~~~~~~~P~qi~l~~~~~~-~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~ 109 (487)
.|||+. +... +.....|+||||++++++ ++|+|+|+|.... ...+.|+||++++.+..++.|.+.
T Consensus 7 ~~~p~~~~~~~~-p~~~~~P~qvhl~~~~~~~tsm~VsW~T~~~~-----------~~~~~V~yG~~~~~~~~~a~g~s~ 74 (119)
T d1xzwa1 7 VDMPWDSDVFAV-PSGYNAPQQVHITQGDYEGRGVIISWTTPYDK-----------AGANKVFYWSENSKSQKRAMGTVV 74 (119)
T ss_dssp HBCCTTCGGGCC-CCSTTCCEEEEEEECSSSSSCEEEEEEESSCC-----------TTTTEEEEEETTCCCCEEEECEEE
T ss_pred cccCCCCccccC-CCCCCCCCEEEEEecCCCCCEEEEEEECCCCC-----------CCCCEEEEcCCCCCCccEEEEEEE
Confidence 367775 2222 223678999999999876 8999999996532 135799999999999999998887
Q ss_pred EeeeecCCCCCCccccCcEEEEEeCCCCCCCEEEEEEecCCCCCcCceEEEEcCC
Q 039280 110 VYNQLYPPDGLQNYTSGIIHHVLITGLQPNTLYEYECGDPSISAMSSSHYFRTMP 164 (487)
Q Consensus 110 ~~~~~~~~~g~~~~~~~~~h~v~l~gL~P~T~Y~Y~vg~~~~~~~s~~~~F~T~p 164 (487)
+|... ++..+++|+|+|+||+|+|+|+||||++ +||++|+|+|+|
T Consensus 75 ~~~~~-------~~~~~~~H~v~LtgL~P~T~Y~YrVG~~---~~S~~~~F~T~P 119 (119)
T d1xzwa1 75 TYKYY-------NYTSAFIHHCTIKDLEYDTKYYYRLGFG---DAKRQFWFVTPP 119 (119)
T ss_dssp CCEET-------TEECCEEEEEEECCCCTTCEEEEEECCG---GGCEEEEEECCC
T ss_pred Eeecc-------cccCCeEEEEEECCCCCCCEEEEEECCC---CccceEEEeCCC
Confidence 76531 2456799999999999999999999975 699999999987
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.87 E-value=1.9e-21 Score=185.86 Aligned_cols=193 Identities=16% Similarity=0.189 Sum_probs=128.0
Q ss_pred CcEEEEEecCCCCCC---------h----HHHHHHHHH--cCCCEEEEcCccccccccccCCCccccccccCCCCcccch
Q 039280 172 PNRIAVVGDLGLTYN---------T----TTTVAHLMS--NHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQET 236 (487)
Q Consensus 172 ~~~f~v~gD~~~~~~---------~----~~~l~~l~~--~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~ 236 (487)
.|||++++|+|.... . .++++.+.+ .+|||||++||++.. |.
T Consensus 4 ~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~pD~vl~~GDl~~~------g~----------------- 60 (256)
T d2hy1a1 4 DYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADK------GE----------------- 60 (256)
T ss_dssp SEEEEEECCCCBC----------CHHHHHHHHHHHHHHHTCCCSEEEECSCCBSS------CC-----------------
T ss_pred CEEEEEEeeCccCCCCcccccCcCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCC------CC-----------------
Confidence 699999999997432 1 234455544 379999999999942 32
Q ss_pred hhHHHHHHHHhhhccc--cCCCEEEecCCcccccCccchhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCccc
Q 039280 237 YQPRWDYWGRYMQPLV--SNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYID 314 (487)
Q Consensus 237 y~~~w~~~~~~~~~l~--~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~ 314 (487)
...++.+.+.+.++. ..+|+++++||||.. ..+..+.... . ......+|++..++++|++|||...
T Consensus 61 -~~~~~~~~~~l~~~~~~~~~p~~~v~GNHD~~-----~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~ldt~~~ 128 (256)
T d2hy1a1 61 -PAAYRKLRGLVEPFAAQLGAELVWVMGNHDDR-----AELRKFLLDE---A---PSMAPLDRVCMIDGLRIIVLDTSVP 128 (256)
T ss_dssp -HHHHHHHHHHHHHHHHHHTCEEEECCCTTSCH-----HHHHHHTTCC---C---CCCSCCCEEEEETTEEEEECCCBCT
T ss_pred -hhHHHHHHHHhhhhhhhcCCCEEEEcccccch-----hhhhhhhccc---c---ccccccceEEEecccceeeeeeeec
Confidence 123444555554432 368999999999953 2222222111 1 1234567889999999999998653
Q ss_pred C----CCChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcch-hHHHHHHHHHHHHHcCCcEEEeCccccceec
Q 039280 315 Y----DKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYRE-VECMRVEMEDLLYYYGVDIVFNGHVHAYERS 389 (487)
Q Consensus 315 ~----~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~-~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~ 389 (487)
. ....+|++||++.|++.. ...+||++|+|++......... .....+.+.+++++++|+++|+||.|...+.
T Consensus 129 ~~~~g~~~~~~~~wl~~~L~~~~---~~~~iv~~Hhpp~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~GH~H~~~~~ 205 (256)
T d2hy1a1 129 GHHHGEIRASQLGWLAEELATPA---PDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNA 205 (256)
T ss_dssp TCSSBCCCHHHHHHHHHHHTSCC---TTCEEEECSSCSSCCSSHHHHTTSBCCHHHHHHHHTTSSEEEEEECSSSSCEEE
T ss_pred CCcCCcccHHHHHHHHHHHHhhh---ccCceeeeecCCcccccccccccccccHHHHHHHHhccCceEEEccccchhhce
Confidence 2 246899999999998853 2347888999987643211000 0012467888999999999999999976554
Q ss_pred ccccCCccCCCCcEEEEeCCc
Q 039280 390 NRVYNYSLDPCGPVYILVGDG 410 (487)
Q Consensus 390 ~p~~~~~~~~~g~vyIv~G~g 410 (487)
.-+|+.++++|+.
T Consensus 206 --------~~~gi~~~~~~s~ 218 (256)
T d2hy1a1 206 --------TFVGIPVSVASAT 218 (256)
T ss_dssp --------EETTEEEEECCCC
T ss_pred --------EECCEEEEEcCCc
Confidence 2357888877653
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Probab=99.84 E-value=1.4e-20 Score=182.12 Aligned_cols=209 Identities=17% Similarity=0.137 Sum_probs=130.4
Q ss_pred cEEEEEecCCCCCC--------------------hHHHHHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCc
Q 039280 173 NRIAVVGDLGLTYN--------------------TTTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESP 232 (487)
Q Consensus 173 ~~f~v~gD~~~~~~--------------------~~~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~ 232 (487)
|||++++|+|.+.. ..+.++.+.+.+|||||++||++.....
T Consensus 4 f~f~~isD~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~i~~~~~DfVv~~GDl~~~~~~------------------ 65 (320)
T d2nxfa1 4 FTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNR------------------ 65 (320)
T ss_dssp EEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHH------------------
T ss_pred EEEEEEecCCCCCCCCccccccccchhhHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCc------------------
Confidence 89999999996520 1233455667899999999999953210
Q ss_pred ccchhhHHHHHHHHhhhccccCCCEEEecCCcccccCccchhhHHhhc---cc--CCCCCCCCCCCcceEEEEeCCEEEE
Q 039280 233 IQETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSS---RF--AFPSEESGSSSSLYYSFNAGGIHFV 307 (487)
Q Consensus 233 ~~~~y~~~w~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~---~f--~~P~~~~~~~~~~yYsf~~g~v~fi 307 (487)
........|+.+.+.++. ..+|++.++||||............... +. ..............+.+..++++|+
T Consensus 66 ~~~~~~~~~~~~~~~~~~--~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (320)
T d2nxfa1 66 RRDASDRALDTVMAELDA--CSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFV 143 (320)
T ss_dssp HTTCHHHHHHHHHHHHHT--TCSEEEECCCHHHHHHCCHHHHHTSTTCCCC------CEECGGGTCCCEEEEEETTEEEE
T ss_pred chhHHHHHHHHHHHHHHH--cCCCEEEecccCccccccchhcccccccchhhhcccccccccCCCCccceeecCCCeEEE
Confidence 000112334444444443 3789999999999864321110000000 00 0000001122334567788999999
Q ss_pred EEcCccc----------------------------------------------CCCChHHHHHHHHHhcccCCCCCCeEE
Q 039280 308 MLSAYID----------------------------------------------YDKSSDQYKWLESDLGDVDREVTPWLI 341 (487)
Q Consensus 308 ~Ldt~~~----------------------------------------------~~~~~~Q~~WL~~~L~~~~r~~~~w~I 341 (487)
.+++... ...+.+|++||+++|+++.++. .++|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~-~~vi 222 (320)
T d2nxfa1 144 LLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQ-ERVL 222 (320)
T ss_dssp ECCTTSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHHT-CEEE
T ss_pred EecCcccccccccccccccccccceeeecccccceecccccccccccccccccccccHHHHHHHHHHHHhhhhcC-CceE
Confidence 9986321 0125889999999998764333 4689
Q ss_pred EEcCCCccccCCCCcchhHHHHHHHHHHHHHcC-CcEEEeCccccceecccccCCccCCCCcEEEEeCCc
Q 039280 342 AAWHPPWYSTYSAHYREVECMRVEMEDLLYYYG-VDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDG 410 (487)
Q Consensus 342 v~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~-VdlvlsGH~H~yeR~~p~~~~~~~~~g~vyIv~G~g 410 (487)
+++|+|++........ .....+++.++|.+|+ |+++|+||+|..++.. ..+|+.||+.|+.
T Consensus 223 v~~H~p~~~~~~~~~~-~~~~~~~~~~~l~~~~~V~~v~~GH~H~~~~~~-------~~~g~~~i~~~~~ 284 (320)
T d2nxfa1 223 IFSHLPVHPCAADPIC-LAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCT-------DSSGAQHITLEGV 284 (320)
T ss_dssp EEESSCCCTTSSCGGG-SCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEE-------CTTSCEEEECCCG
T ss_pred EEECCCCccCCCCCcc-chhhHHHHHHHHHhCCCeeEEEeCCcCCcCeee-------ccCCCEEEECCee
Confidence 9999998865433211 1112467888999984 9999999999877652 4578999988764
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Probab=99.83 E-value=1.8e-19 Score=173.65 Aligned_cols=194 Identities=15% Similarity=0.220 Sum_probs=127.9
Q ss_pred cEEEEEecCCCCCC---------h----HHHHHHHHH--cCCCEEEEcCccccccccccCCCccccccccCCCCcccchh
Q 039280 173 NRIAVVGDLGLTYN---------T----TTTVAHLMS--NHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETY 237 (487)
Q Consensus 173 ~~f~v~gD~~~~~~---------~----~~~l~~l~~--~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y 237 (487)
|||++++|+|.... . .++++.+.+ .+||+||++||+++. |.
T Consensus 1 M~i~hiSD~Hl~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~D~vv~~GDl~~~------~~------------------ 56 (271)
T d3d03a1 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNC------GR------------------ 56 (271)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSS------CC------------------
T ss_pred CEEEEEecCcCCCCccccccCcCHHHHHHHHHHHHHhcCCCCCEEEECcccCcC------Cc------------------
Confidence 68999999996421 2 234555543 479999999999952 22
Q ss_pred hHHHHHHHHhhhccccCCCEEEecCCcccccCccchhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCcccC--
Q 039280 238 QPRWDYWGRYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYIDY-- 315 (487)
Q Consensus 238 ~~~w~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~~-- 315 (487)
...++.+.+.++.+ .+|+++++||||... .+..+...+. +.. ........|.++.++++||+||+....
T Consensus 57 ~~~y~~~~~~l~~l--~~p~~~i~GNHD~~~-----~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~i~ldt~~~~~~ 127 (271)
T d3d03a1 57 PEEYQVARQILGSL--NYPLYLIPGNHDDKA-----LFLEYLQPLC-PQL-GSDANNMRCAVDDFATRLLFIDSSRAGTS 127 (271)
T ss_dssp HHHHHHHHHHHTTC--SSCEEEECCTTSCHH-----HHHHHHGGGS-GGG-CSCGGGCCEEECSSSSEEEECCCCCTTCS
T ss_pred chhHHHHHHHHhcc--CCCEEEEecCccchH-----HHHHHhhhhh-hcc-ccccCcceEEEecCCeEEEecccccCCCC
Confidence 23455666666665 689999999999742 2222222110 100 011234568888999999999986532
Q ss_pred --CCChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcch-hHHHHHHHHHHHHHc-CCcEEEeCccccceeccc
Q 039280 316 --DKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYRE-VECMRVEMEDLLYYY-GVDIVFNGHVHAYERSNR 391 (487)
Q Consensus 316 --~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~-~~~~r~~l~~l~~~~-~VdlvlsGH~H~yeR~~p 391 (487)
....+|++||+++|++.. .. ++||++|+|++......... .....+.|.++|+++ +|+++|+||.|......
T Consensus 128 ~~~l~~~ql~wL~~~L~~~~--~~-~~iv~~Hh~p~~~~~~~~d~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~- 203 (271)
T d3d03a1 128 KGWLTDETISWLEAQLFEGG--DK-PATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMTQ- 203 (271)
T ss_dssp SBCCCHHHHHHHHHHHHHHT--TS-CEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEEE-
T ss_pred cceecHHHHHHHHHHHhhhc--cc-eeEEEeccCccccCccccccccccchHHHHHHHHhcCCeEEEEeCCcchhhceE-
Confidence 246899999999998853 33 37777888877654332211 111246788899998 69999999999766552
Q ss_pred ccCCccCCCCcEEEEeCCc
Q 039280 392 VYNYSLDPCGPVYILVGDG 410 (487)
Q Consensus 392 ~~~~~~~~~g~vyIv~G~g 410 (487)
-+|+.++++.+.
T Consensus 204 -------~~g~~~~~~pst 215 (271)
T d3d03a1 204 -------YRQALISTLPGT 215 (271)
T ss_dssp -------ETTEEEEECCCS
T ss_pred -------ECCEEEEEcCCc
Confidence 357777665443
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Probab=99.63 E-value=2.2e-15 Score=139.14 Aligned_cols=193 Identities=13% Similarity=0.052 Sum_probs=116.9
Q ss_pred CcEEEEEecCCCCCCh-HHHHHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhhhc
Q 039280 172 PNRIAVVGDLGLTYNT-TTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYMQP 250 (487)
Q Consensus 172 ~~~f~v~gD~~~~~~~-~~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~~~ 250 (487)
+-+|+++||+|..... .+.++.+.+.++|+|+++||++.. +.. ..++..+.+.+..
T Consensus 5 ~~~i~~~sd~hg~~eale~~~~~~~~~~~D~vv~~GDl~~~------~~~-----------------~~~~~~~~~~L~~ 61 (228)
T d1uf3a_ 5 VRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPK------AAK-----------------SRDYAAFFRILSE 61 (228)
T ss_dssp CCEEEEEECCTTCHHHHHHHHTHHHHHTCSEEEEESCSSCT------TCC-----------------HHHHHHHHHHHGG
T ss_pred ccEEEEEeCCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCC------Ccc-----------------chHHHHhhhhhcc
Confidence 4578899999986443 344555566799999999999942 210 1233444555544
Q ss_pred cccCCCEEEecCCcccccCccchhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCcccC----------CCChH
Q 039280 251 LVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYIDY----------DKSSD 320 (487)
Q Consensus 251 l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~~----------~~~~~ 320 (487)
+ .+|+++++||||...... ....+......+.. ......+.+..+++.++.++..... .....
T Consensus 62 ~--~~pv~~i~GNHD~~~~~~--~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (228)
T d1uf3a_ 62 A--HLPTAYVPGPQDAPIWEY--LREAANVELVHPEM---RNVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAW 134 (228)
T ss_dssp G--CSCEEEECCTTSCSHHHH--HHHHHHHHHHCTTE---EECBTSEEEETTTEEEEEECSEEESSSCCBSSSSCEEEHH
T ss_pred c--cceEEEEecCCCchhhhh--hhhhcccccccccc---cccceeeeeccCCEEEEecCCccccCcCcchhhhhhhhHH
Confidence 3 789999999999742110 00111111100000 0012235577788888888753211 12568
Q ss_pred HHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceecccccCCccCCC
Q 039280 321 QYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPC 400 (487)
Q Consensus 321 Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~p~~~~~~~~~ 400 (487)
|.+||++.|+... ..+.|+++|.|++........ ...+.+++++++++++++||+|..+.. ..
T Consensus 135 ~~~~l~~~l~~~~---~~~~il~~H~p~~~~~~~~~~-----~~~~~~~~~~~~~~lvl~GH~H~~~~~---------~g 197 (228)
T d1uf3a_ 135 VAEYRLKALWELK---DYPKIFLFHTMPYHKGLNEQG-----SHEVAHLIKTHNPLLVLVAGKGQKHEM---------LG 197 (228)
T ss_dssp HHHHHHGGGGGSC---SCCEEEEESSCBCBTTTBTTS-----BHHHHHHHHHHCCSEEEECCSSCEEEE---------ET
T ss_pred HHHHHHHHHhhcc---CCceEEEEeeeccCccccccc-----cHHHHHHHHhcCCcEEEEcccccchhc---------cC
Confidence 8999999988743 234788899998764332211 135667888999999999999975322 13
Q ss_pred CcEEEEeCCcc
Q 039280 401 GPVYILVGDGG 411 (487)
Q Consensus 401 g~vyIv~G~gG 411 (487)
++.++..|+.+
T Consensus 198 ~~~~v~pG~~~ 208 (228)
T d1uf3a_ 198 ASWVVVPGDLS 208 (228)
T ss_dssp TEEEEECCBGG
T ss_pred CEEEEECCccc
Confidence 34455556554
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Probab=99.60 E-value=4.7e-15 Score=139.10 Aligned_cols=220 Identities=10% Similarity=0.173 Sum_probs=113.1
Q ss_pred CcEEEEEecCCCCCCh-HHHHHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccch-hhHHHHHHHHhhh
Q 039280 172 PNRIAVVGDLGLTYNT-TTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQET-YQPRWDYWGRYMQ 249 (487)
Q Consensus 172 ~~~f~v~gD~~~~~~~-~~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~-y~~~w~~~~~~~~ 249 (487)
|.||++++|+|..... .+.++.+.+.+||+||++||+++.... +......+.........+... -...-..+...++
T Consensus 2 ~~ri~~isD~h~~~~~l~~l~~~~~~~~~D~vli~GDl~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~d~~~~~~~~~ 80 (257)
T d2yvta1 2 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEAL-EKEYERAHLARREPNRKVIHENEHYIIETLDKFFR 80 (257)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCCHHH-HHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHhhcCCCEEEEecccCCCCCC-CHHHHHHHHhhhhhceeeeccccccchhhHHHHHH
Confidence 5799999999977553 445566677899999999999953100 000000000000000000000 0000011222233
Q ss_pred cc-ccCCCEEEecCCcccccCccchhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCcccCC---------CCh
Q 039280 250 PL-VSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYIDYD---------KSS 319 (487)
Q Consensus 250 ~l-~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~~~---------~~~ 319 (487)
.+ ...+|+++++||||..... .....+......+.. ......+.+..+++.|+.+++..... ...
T Consensus 81 ~L~~~~~pv~~i~GNHD~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (257)
T d2yvta1 81 EIGELGVKTFVVPGKNDAPLKI--FLRAAYEAETAYPNI---RVLHEGFAGWRGEFEVIGFGGLLTEHEFEEDFVLKYPR 155 (257)
T ss_dssp HHHTTCSEEEEECCTTSCCHHH--HHHHHHHTTTTCTTE---EECSSEEEEETTTEEEEEECSEEESSCCBSSSSCEEEH
T ss_pred HHHhcCCcEEEEeCCCcchhhH--HHHHhcccccccccc---ccccceeEEecCCeEEEEeccccCCccccchhhhhhhh
Confidence 33 2478999999999964211 111122211111110 01122334556778888876532211 123
Q ss_pred HHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcch--hHHHHHHHHHHHHHcCCcEEEeCccccceecccccCCcc
Q 039280 320 DQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYRE--VECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSL 397 (487)
Q Consensus 320 ~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~--~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~p~~~~~~ 397 (487)
.+..|++..+++. ....+|+++|+|++.+....... .....+.+..++++++++++++||+|.....
T Consensus 156 ~~~~~~~~~~~~~---~~~~~Il~~H~pp~~~~~~~~~~~~~~~g~~~l~~~l~~~~~~~~~~GHiH~~~~~-------- 224 (257)
T d2yvta1 156 WYVEYILKFVNEL---KPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVGKGHEL-------- 224 (257)
T ss_dssp HHHHHHGGGGGGS---CCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSCCEEEE--------
T ss_pred hHHHHHHHHhhhc---ccccEEEEEccccccccccccccchhhhhhHHHHHhhhhcCCcEEEEEeecCCeEe--------
Confidence 3344555555542 33458999999987643221111 1112356788999999999999999964322
Q ss_pred CCCCcEEEEeCC
Q 039280 398 DPCGPVYILVGD 409 (487)
Q Consensus 398 ~~~g~vyIv~G~ 409 (487)
..++.++..|+
T Consensus 225 -~g~~~~~~pGs 235 (257)
T d2yvta1 225 -VGNTIVVNPGE 235 (257)
T ss_dssp -ETTEEEEECCB
T ss_pred -cCCeEEEECCc
Confidence 24556666664
|
| >d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Putative phosphodiesterase MJ0936 species: Methanococcus jannaschii [TaxId: 2190]
Probab=99.13 E-value=1.9e-10 Score=101.22 Aligned_cols=142 Identities=13% Similarity=0.069 Sum_probs=86.6
Q ss_pred cEEEEEecCCCCCC-hHHHHHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhhhcc
Q 039280 173 NRIAVVGDLGLTYN-TTTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYMQPL 251 (487)
Q Consensus 173 ~~f~v~gD~~~~~~-~~~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~~~l 251 (487)
|||+++||+|.... ..++++.+.+.++|.|+++||++.. ...+ .+..
T Consensus 1 MkI~iiSDiHgn~~al~~vl~~~~~~~~D~ii~~GD~~~~---------------------------~~~~----~l~~- 48 (165)
T d1s3la_ 1 MKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSL---------------------------FVIK----EFEN- 48 (165)
T ss_dssp CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCST---------------------------HHHH----HGGG-
T ss_pred CEEEEEEeCCCCHHHHHHHHHHHHhcCCCEEEECCCccCH---------------------------HHHH----HHhh-
Confidence 69999999997632 3456677778899999999999831 1111 1222
Q ss_pred ccCCCEEEecCCcccccCccchhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCcccCCCChHHHHHHHHHhcc
Q 039280 252 VSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYIDYDKSSDQYKWLESDLGD 331 (487)
Q Consensus 252 ~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~ 331 (487)
...|++.+.||||...... ........... .-+....+.+++
T Consensus 49 -~~~~~~~v~GN~D~~~~~~----~~~~~~~~~~~-----~~~~~~~~~~~~---------------------------- 90 (165)
T d1s3la_ 49 -LNANIIATYGNNDGERCKL----KEWLKDINEEN-----IIDDFISVEIDD---------------------------- 90 (165)
T ss_dssp -CSSEEEEECCTTCCCHHHH----HHHHHHHCTTC-----EEESEEEEEETT----------------------------
T ss_pred -cCccEEEEcccccccchhh----hHhhhhhcccc-----cCChhhceEECC----------------------------
Confidence 2568999999999742110 00000010000 001111222111
Q ss_pred cCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceecccccCCccCCCCcEEEEeCCcc
Q 039280 332 VDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDGG 411 (487)
Q Consensus 332 ~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~p~~~~~~~~~g~vyIv~G~gG 411 (487)
..|++.|.+++. .++.++.+.++|++|+||+|..... .-+++++|..|+-|
T Consensus 91 -------~~i~l~Hg~~~~--------------~~~~~~~~~~~d~v~~GHtH~~~~~--------~~~~~~~iNPGSvg 141 (165)
T d1s3la_ 91 -------LKFFITHGHHQS--------------VLEMAIKSGLYDVVIYGHTHERVFE--------EVDDVLVINPGECC 141 (165)
T ss_dssp -------EEEEEEESCCHH--------------HHHHHHHHSCCSEEEEECSSCCEEE--------EETTEEEEECCCSS
T ss_pred -------cEEEEEECCccc--------------HHHHHhhcCCCCEEEECCcCcceEE--------EECCEEEEECCCCC
Confidence 257778865432 3446777889999999999974332 23688999999988
Q ss_pred cc
Q 039280 412 NV 413 (487)
Q Consensus 412 ~~ 413 (487)
..
T Consensus 142 ~p 143 (165)
T d1s3la_ 142 GY 143 (165)
T ss_dssp CT
T ss_pred CC
Confidence 64
|
| >d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Cryptosporidium parvum [TaxId: 5807]
Probab=99.01 E-value=4.4e-09 Score=94.73 Aligned_cols=42 Identities=19% Similarity=0.327 Sum_probs=32.8
Q ss_pred HHHHHHHHHcCCcEEEeCccccceecccccCCccCCCCcEEEEeCCcccc
Q 039280 364 VEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDGGNV 413 (487)
Q Consensus 364 ~~l~~l~~~~~VdlvlsGH~H~yeR~~p~~~~~~~~~g~vyIv~G~gG~~ 413 (487)
+.+..++.+.++|++++||+|..... .-+|.++|..|+.|..
T Consensus 109 ~~l~~~~~~~~~dvvi~GHTH~~~~~--------~~~g~~~iNPGSvg~p 150 (193)
T d2a22a1 109 GSLEQWQRRLDCDILVTGHTHKLRVF--------EKNGKLFLNPGTATGA 150 (193)
T ss_dssp HHHHHHHHHHTCSEEEECSSCCCEEE--------EETTEEEEECCCSSCC
T ss_pred HHHHHHHhhcCCCEEEEcCccCceEE--------EECCEEEEECCCCCcC
Confidence 45667788889999999999986443 2367888999998763
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=98.96 E-value=5.9e-10 Score=107.76 Aligned_cols=74 Identities=20% Similarity=0.316 Sum_probs=48.2
Q ss_pred cEEEEEecCCCCCCh----------HHH----HHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhh
Q 039280 173 NRIAVVGDLGLTYNT----------TTT----VAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQ 238 (487)
Q Consensus 173 ~~f~v~gD~~~~~~~----------~~~----l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~ 238 (487)
|||++++|+|.+... ... ++.+.+.++|+||++||++.. +.. ..
T Consensus 1 Mkilh~SDlHlG~~~~~~~~~~~~~~~~l~~iv~~a~~~~~D~vli~GDlfd~------~~~------------~~---- 58 (333)
T d1ii7a_ 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHS------SRP------------SP---- 58 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSS------SSC------------CH----
T ss_pred CEEEEEecCcCCCCCcCchhHHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCC------CCC------------CH----
Confidence 699999999976431 122 333456799999999999842 110 00
Q ss_pred HHHHHHHHhhhcc-ccCCCEEEecCCccccc
Q 039280 239 PRWDYWGRYMQPL-VSNVPTMVIEGEHEIER 268 (487)
Q Consensus 239 ~~w~~~~~~~~~l-~~~~P~~~v~GNHD~~~ 268 (487)
.....+.+.++.+ ..++|+++++||||...
T Consensus 59 ~~~~~~~~~~~~l~~~~i~v~~i~GNHD~~~ 89 (333)
T d1ii7a_ 59 GTLKKAIALLQIPKEHSIPVFAIEGNHDRTQ 89 (333)
T ss_dssp HHHHHHHHHHHHHHTTTCCEEEECCTTTCCS
T ss_pred HHHHHHHHHHhhHHhcCCcEEEeCCCCcccc
Confidence 1123334445554 35799999999999753
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=98.94 E-value=2e-10 Score=106.87 Aligned_cols=190 Identities=8% Similarity=-0.033 Sum_probs=93.3
Q ss_pred cEEEEEecCCCCCCh-HHHHHHHHH-----cCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHH
Q 039280 173 NRIAVVGDLGLTYNT-TTTVAHLMS-----NHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGR 246 (487)
Q Consensus 173 ~~f~v~gD~~~~~~~-~~~l~~l~~-----~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~ 246 (487)
++|+++||+|..... .++++.+.+ .++|.||++||++.. |.. -.+..+
T Consensus 1 v~I~visDiHg~~~~l~~~l~~i~~~~~~~~~~D~ii~~GDlvd~------G~~--------------------~~evi~ 54 (251)
T d1nnwa_ 1 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGL------FPY--------------------PKEVIE 54 (251)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSS------SSC--------------------HHHHHH
T ss_pred CEEEEEEccccCHHHHHHHHHHHHHhhccCCCCcEEEEecCcCCC------CCC--------------------cHHHHH
Confidence 489999999965332 344555432 256999999999942 210 122334
Q ss_pred hhhccccCCCEEEecCCcccccCccchhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCcccCCCChHHHHHHH
Q 039280 247 YMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYIDYDKSSDQYKWLE 326 (487)
Q Consensus 247 ~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~ 326 (487)
.+..+..+.++++++||||.... .+......+.. ....+ ..+... ..++ ........++.+||+
T Consensus 55 ~l~~l~~~~~v~~v~GNHD~~~~-------~~~~~~~~~~~----~~~~~---~~~~~~-~~~~-~~~~~~~~~~~~~l~ 118 (251)
T d1nnwa_ 55 VIKDLTKKENVKIIRGKYDQIIA-------MSDPHATDPGY----IDKLE---LPGHVK-KALK-FTWEKLGHEGREYLR 118 (251)
T ss_dssp HHHHHHHHSCEEEECCHHHHHHH-------HSCTTCSSSGG----GGGSS---CCHHHH-HHHH-HHHHHHHHHHHHHHH
T ss_pred HHHHHhhcCCEEEEeccHHHHHH-------hccccccccch----hhhhc---cchhHH-HhhH-HHhhhcCHHHHHHHH
Confidence 44444445588999999996311 00000000000 00000 000000 0000 000011345666766
Q ss_pred HHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHc-CCcEEEeCccccceecccccCCccCCCCcEEE
Q 039280 327 SDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYY-GVDIVFNGHVHAYERSNRVYNYSLDPCGPVYI 405 (487)
Q Consensus 327 ~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~-~VdlvlsGH~H~yeR~~p~~~~~~~~~g~vyI 405 (487)
+...........-.+++.|.++........... .....+...+... +++++|+||+|.-... ..++..+|
T Consensus 119 ~~~~~~~~~~~~~~~~~~H~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~vv~GHtH~~~~~--------~~~~~~~i 189 (251)
T d1nnwa_ 119 DLPIYLVDKIGGNEVFGVYGSPINPFDGEVLAE-QPTSYYEAIMRPVKDYEMLIVASPMYPVDA--------MTRYGRVV 189 (251)
T ss_dssp TSCSCEEEEETTEEEEEESSCSSCTTTCCCCSS-CCHHHHHHHHGGGTTSSEEEESTTCSEEEE--------EETTEEEE
T ss_pred hcccceEEeeCCCcEEEEecCccCcccchhhhh-hHHHHHhhhcccccCceEEEEeccceEEEE--------Eeeeeecc
Confidence 543332111112257777877654332211110 0112223333333 5899999999974433 23677889
Q ss_pred EeCCcccc
Q 039280 406 LVGDGGNV 413 (487)
Q Consensus 406 v~G~gG~~ 413 (487)
..|+-|..
T Consensus 190 n~Gsvg~~ 197 (251)
T d1nnwa_ 190 CPGSVGFP 197 (251)
T ss_dssp EECCSSSC
T ss_pred cccccccc
Confidence 99999874
|
| >d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.94 E-value=3.3e-09 Score=94.62 Aligned_cols=134 Identities=19% Similarity=0.321 Sum_probs=83.7
Q ss_pred cEEEEEecCCCCCCh---HHHHHHHH-HcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhh
Q 039280 173 NRIAVVGDLGLTYNT---TTTVAHLM-SNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYM 248 (487)
Q Consensus 173 ~~f~v~gD~~~~~~~---~~~l~~l~-~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~ 248 (487)
||++++||+|..... .+.+.++. ..++|.|+|+||++.. +..+.+
T Consensus 1 MkI~viSD~H~~~~~~~l~~~~~~~~~~~~~D~Ii~~GDi~~~-------------------------------e~l~~l 49 (182)
T d1z2wa1 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTK-------------------------------ESYDYL 49 (182)
T ss_dssp CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBSH-------------------------------HHHHHH
T ss_pred CEEEEEeecCCCCcchhhHHHHHHHhcccCCCEEEEccCccch-------------------------------hhHHHH
Confidence 699999999975432 23444433 3479999999999821 112233
Q ss_pred hccccCCCEEEecCCcccccCccchhhHHhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcCcccCCCChHHHHHHHHH
Q 039280 249 QPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEESGSSSSLYYSFNAGGIHFVMLSAYIDYDKSSDQYKWLESD 328 (487)
Q Consensus 249 ~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yYsf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~ 328 (487)
+.+ ..|++.+.||||... .+|. .-.+++++
T Consensus 50 ~~~--~~~v~~V~GN~D~~~--------------~~p~---------~~~~~~~g------------------------- 79 (182)
T d1z2wa1 50 KTL--AGDVHIVRGDFDENL--------------NYPE---------QKVVTVGQ------------------------- 79 (182)
T ss_dssp HHH--CSEEEECCCTTCCCT--------------TSCS---------EEEEEETT-------------------------
T ss_pred Hhh--CCceEEEeCCcCccc--------------ccce---------EEEEEEcC-------------------------
Confidence 333 347899999999641 1221 11122222
Q ss_pred hcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceecccccCCccCCCCcEEEEeC
Q 039280 329 LGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVG 408 (487)
Q Consensus 329 L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~p~~~~~~~~~g~vyIv~G 408 (487)
+.|.+.|...+.... . .+.+..++++.++|++|+||+|...-. .-+|+++|..|
T Consensus 80 ----------~~i~~~Hg~~~~~~~----~----~~~l~~~~~~~~~divi~GHTH~p~~~--------~~~~~~~iNPG 133 (182)
T d1z2wa1 80 ----------FKIGLIHGHQVIPWG----D----MASLALLQRQFDVDILISGHTHKFEAF--------EHENKFYINPG 133 (182)
T ss_dssp ----------EEEEEECSCCCCBTT----C----HHHHHHHHHHHSSSEEECCSSCCCEEE--------EETTEEEEECC
T ss_pred ----------cEEEEEeCCCCCCCC----C----HHHHHHHHhccCCCEEEECCcCcceEE--------EECCEEEEeCC
Confidence 246666755443221 1 235566777889999999999976443 13678999999
Q ss_pred Ccccc
Q 039280 409 DGGNV 413 (487)
Q Consensus 409 ~gG~~ 413 (487)
+.|..
T Consensus 134 Sv~~p 138 (182)
T d1z2wa1 134 SATGA 138 (182)
T ss_dssp CTTCC
T ss_pred CCCCC
Confidence 98764
|
| >d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Uncharacterized protein SP1879 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.91 E-value=9.8e-09 Score=90.73 Aligned_cols=41 Identities=12% Similarity=0.082 Sum_probs=32.7
Q ss_pred HHHHHHHHcCCcEEEeCccccceecccccCCccCCCCcEEEEeCCcccc
Q 039280 365 EMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPVYILVGDGGNV 413 (487)
Q Consensus 365 ~l~~l~~~~~VdlvlsGH~H~yeR~~p~~~~~~~~~g~vyIv~G~gG~~ 413 (487)
.+..++.+.++|++++||+|...... .+++++|..|+-|..
T Consensus 93 ~l~~~~~~~~~dvvi~GHTH~p~~~~--------~~~~~~iNPGSvg~p 133 (173)
T d3ck2a1 93 KLDYWAQEEEAAICLYGHLHVPSAWL--------EGKILFLNPGSISQP 133 (173)
T ss_dssp HHHHHHHHTTCSEEECCSSCCEEEEE--------ETTEEEEEECCSSSC
T ss_pred HHHHHHHhcCCCEEEeCCcCcceEEE--------ECCEEEEECCCCCCC
Confidence 45567778899999999999765441 368999999999874
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Probab=98.52 E-value=1.5e-07 Score=83.16 Aligned_cols=38 Identities=11% Similarity=0.249 Sum_probs=29.6
Q ss_pred cEEEEEecCCCCCCh-HHHHHHHHHcCCCEEEEcCcccc
Q 039280 173 NRIAVVGDLGLTYNT-TTTVAHLMSNHPDLLLLIGDLSY 210 (487)
Q Consensus 173 ~~f~v~gD~~~~~~~-~~~l~~l~~~~pdfvl~~GDl~y 210 (487)
+||+++||+|..... .++++.+.+.++|.|+++||++.
T Consensus 2 Mki~iiSDiHg~~~al~~vl~~~~~~~~D~iv~~GDiv~ 40 (184)
T d1su1a_ 2 MKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLN 40 (184)
T ss_dssp CEEEEECCCTTBHHHHHHHHHHHHHHTCSEEEECSCCSC
T ss_pred cEEEEEeecCCCHHHHHHHHHHHhhcCCCEEEEcCcccc
Confidence 799999999965322 34555566679999999999984
|
| >d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Hypothetical protein aq 1666 domain: Hypothetical protein aq 1666 species: Aquifex aeolicus [TaxId: 63363]
Probab=98.37 E-value=1.1e-06 Score=78.32 Aligned_cols=46 Identities=17% Similarity=0.230 Sum_probs=34.0
Q ss_pred EEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCcccccee
Q 039280 340 LIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYER 388 (487)
Q Consensus 340 ~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR 388 (487)
.|+++|.|+....... .......+..+..+.+++++|+||+|....
T Consensus 108 ~i~l~H~P~~~~~~~~---~~~~~~~~~~~~~~~~~~~~lhGH~H~~~~ 153 (188)
T d1xm7a_ 108 RILLSHYPAKDPITER---YPDRQEMVREIYFKENCDLLIHGHVHWNRE 153 (188)
T ss_dssp EEEEESSCSSCSSCCS---CHHHHHHHHHHHHHTTCSEEEECCCCCCSC
T ss_pred EEEEEeCCCccccccc---cccchhHHHHHHHhcCceEEEEeeccCCcc
Confidence 7999999986543322 122346777899999999999999996543
|
| >d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.28 E-value=2.8e-06 Score=82.61 Aligned_cols=187 Identities=19% Similarity=0.148 Sum_probs=94.3
Q ss_pred CCcEEEEEecCCCCCC--------h---HHHHHHHH----HcCCC-EEEEcCccccccccccCCCccccccccCCCCccc
Q 039280 171 YPNRIAVVGDLGLTYN--------T---TTTVAHLM----SNHPD-LLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQ 234 (487)
Q Consensus 171 ~~~~f~v~gD~~~~~~--------~---~~~l~~l~----~~~pd-fvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~ 234 (487)
..++|+.++|+|.... . ...++++. +.+++ ++|.+||+.....+ .
T Consensus 7 ~~ltILhtnD~Hg~l~~~~~~~~g~a~~~~~i~~~r~~~~~~~~~~l~ldaGD~~~gs~~-------------------s 67 (337)
T d1usha2 7 YKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPE-------------------S 67 (337)
T ss_dssp EEEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCSSSCHH-------------------H
T ss_pred eEEEEEEEeecccCCcCCCCCCcCHHHHHHHHHHHHHHHHhcCCCEEEEECCCCcccCHH-------------------H
Confidence 3588999999996421 1 12344443 24565 56669999842111 0
Q ss_pred chhhHHHHHHHHhhhccccCCCEEEecCCcccccCccchhhHHhhcccCCCCCC-------CC-CCCcceEEEEeCCEEE
Q 039280 235 ETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEE-------SG-SSSSLYYSFNAGGIHF 306 (487)
Q Consensus 235 ~~y~~~w~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~-------~~-~~~~~yYsf~~g~v~f 306 (487)
..+ ......+.|..+.- =..++||||+... ...+..+.....+|.-. .+ ..-..|.-++.+++++
T Consensus 68 ~~~--~g~~~~~~mn~~g~---Da~~~GNHEfd~G--~~~l~~~~~~~~~p~l~aN~~~~~~~~~~~~py~I~~~~g~kV 140 (337)
T d1usha2 68 DLQ--DAEPDFRGMNLVGY---DAMAIGNHEFDNP--LTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKI 140 (337)
T ss_dssp HTT--TTHHHHHHHHHHTC---CEEECCGGGGSSC--HHHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEE
T ss_pred HHh--CChHHHHHHHhcCC---eEEEechhhhccc--hHHHHHHHHhcCceEeeccccccccccccccceeeeecCCeEE
Confidence 000 11222333443321 1567899999632 23344444444444211 01 1234566678888655
Q ss_pred --EEEcCccc-------C------CCChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHH
Q 039280 307 --VMLSAYID-------Y------DKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLY 371 (487)
Q Consensus 307 --i~Ldt~~~-------~------~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~ 371 (487)
|.+-+..- . ....+..+...++|++. .+...+|+++|.+............ ....+...+.
T Consensus 141 gviG~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~--~~~D~iI~lsH~G~~~d~~~~~~~~--~~~~la~~~~ 216 (337)
T d1usha2 141 AVIGLTTDDTAKIGNPEYFTDIEFRKPADEAKLVIQELQQT--EKPDIIIAATHMGHYDNGEHGSNAP--GDVEMARALP 216 (337)
T ss_dssp EEEEEECTTTTTSSSCCCCTTEEECCHHHHHHHHHHHHHHH--TCCSEEEEEEESCCCGGGCCTTSCC--CHHHHHHHSC
T ss_pred EeecccccccccccCcccccCcccccHHHHHHHHHHHHhhc--cCCCEEEEecccCcccccccccccc--hhHHHHHhCc
Confidence 55543210 0 01123333344445432 2455799999998764322110000 0122333333
Q ss_pred HcCCcEEEeCccccce
Q 039280 372 YYGVDIVFNGHVHAYE 387 (487)
Q Consensus 372 ~~~VdlvlsGH~H~ye 387 (487)
..+||++|.||+|...
T Consensus 217 ~~~vD~IvgGHsH~~~ 232 (337)
T d1usha2 217 AGSLAMIVGGHSQDPV 232 (337)
T ss_dssp TTSSSEEECCSSCCBC
T ss_pred ccCceEEecCccCccc
Confidence 4589999999999753
|
| >d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Candida albicans [TaxId: 5476]
Probab=98.02 E-value=1.7e-05 Score=76.44 Aligned_cols=180 Identities=18% Similarity=0.237 Sum_probs=86.7
Q ss_pred CcEEEEEecCCCCCC--------------hHHHHHHH----HHcCCC-EEEEcCccccccccccCCCccccccccCCCCc
Q 039280 172 PNRIAVVGDLGLTYN--------------TTTTVAHL----MSNHPD-LLLLIGDLSYADLYLTNGTKSSCYLCQSIESP 232 (487)
Q Consensus 172 ~~~f~v~gD~~~~~~--------------~~~~l~~l----~~~~pd-fvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~ 232 (487)
.++|+...|+|.... ..+.+..+ .+.+++ ++|.+||+.....+.+.
T Consensus 11 ~l~iLhtnD~Hg~l~~~~~~~~~~~~~gg~a~~~~~~~~~~~~~~~~~llldaGD~~~Gt~~~~~--------------- 75 (322)
T d3c9fa2 11 DINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDI--------------- 75 (322)
T ss_dssp SEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHS---------------
T ss_pred EEEEEEEeccccCCCCccccccccCccccHHHHHHHHHHHHHhcCCCEEEEECCccCCCCchhhh---------------
Confidence 589999999997421 11222223 234576 55679999953221100
Q ss_pred ccchhhHHHHHHHHhhhccccCCCE-EEecCCcccccCccc-hhhHHhhcccCCCCCC--------CC---CCCcceEEE
Q 039280 233 IQETYQPRWDYWGRYMQPLVSNVPT-MVIEGEHEIERQAEN-QTFAAYSSRFAFPSEE--------SG---SSSSLYYSF 299 (487)
Q Consensus 233 ~~~~y~~~w~~~~~~~~~l~~~~P~-~~v~GNHD~~~~~~~-~~~~~y~~~f~~P~~~--------~~---~~~~~yYsf 299 (487)
+.... ..+-.+...+++ .+++||||++..... ..+......+..|.=. .+ .....|..+
T Consensus 76 ----~~~~G----~~~~~~mn~lgyDa~t~GNHEfd~g~~~l~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~~~y~i~ 147 (322)
T d3c9fa2 76 ----TSPNG----LKSTPIFIKQDYDLLTIGNHELYLWENSKQEYETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKYF 147 (322)
T ss_dssp ----SSSTT----TTTHHHHTTSCCSEECCCGGGSSSHHHHHHHHHHHHHHTTTTBBCSSEEEECTTSCEEESSBSCEEE
T ss_pred ----cccCC----hHHHHHHhccCCcEEeecceecccchHHHHHHHHHHHhcCCCEEeeeEEecCCCCcccccCCceEEE
Confidence 00000 111122233444 678899998632111 1122222333333211 00 122345566
Q ss_pred EeC--CEEEEEEcCcccCCC--------C---hHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHH
Q 039280 300 NAG--GIHFVMLSAYIDYDK--------S---SDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEM 366 (487)
Q Consensus 300 ~~g--~v~fi~Ldt~~~~~~--------~---~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l 366 (487)
..+ ++.++.+........ . ..+..|+++.+++ +..-+|+++|.++.... .+.....+
T Consensus 148 ~~~~~~i~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~D~IV~l~H~g~~~d~----~~~~~~~~-- 217 (322)
T d3c9fa2 148 TTPIRGIRVMAFGFLFDFKRFNSGTRVTPMAETIHEPWFQEALKH----EVDLIIIVGHTPISHNW----GEFYQVHQ-- 217 (322)
T ss_dssp ECTTTCCEEEEEECCCCCCCCCTTEEECCHHHHTTSHHHHHHTTS----CCSEEEEECSSCCCTTT----CHHHHHHH--
T ss_pred EECCCcEEEEEEeeccccccCCCCcEEeCHHHHHHHHHHHHHHhC----CCCEEEEEecCCccccc----cccchHHH--
Confidence 665 578888765432211 1 1122455544443 45669999998864321 11111122
Q ss_pred HHHHHHc-CCc-EEEeCcccc
Q 039280 367 EDLLYYY-GVD-IVFNGHVHA 385 (487)
Q Consensus 367 ~~l~~~~-~Vd-lvlsGH~H~ 385 (487)
.|.+.. +++ ++|.||+|.
T Consensus 218 -~la~~~~~~~~~iigGHsH~ 237 (322)
T d3c9fa2 218 -YLRQFFPDTIIQYFGGHSHI 237 (322)
T ss_dssp -HHHHHCTTSEEEEEECSSCC
T ss_pred -HHHHhCCCCCEEEecccccc
Confidence 222332 344 689999995
|
| >d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=97.78 E-value=0.00023 Score=67.48 Aligned_cols=174 Identities=16% Similarity=0.125 Sum_probs=90.8
Q ss_pred CcEEEEEecCCCCCC---------------h---HHHHHHHHHcCCC-EEEEcCccccccccccCCCccccccccCCCCc
Q 039280 172 PNRIAVVGDLGLTYN---------------T---TTTVAHLMSNHPD-LLLLIGDLSYADLYLTNGTKSSCYLCQSIESP 232 (487)
Q Consensus 172 ~~~f~v~gD~~~~~~---------------~---~~~l~~l~~~~pd-fvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~ 232 (487)
.++|+..+|+|.... . ...++++.+..++ ++|.+||+.....+
T Consensus 2 tl~IlhtnD~Hg~l~~~~~~~~~~~~~~gG~ar~~t~i~~~r~~~~~~l~ldaGD~~~Gs~~------------------ 63 (302)
T d2z1aa2 2 TLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLY------------------ 63 (302)
T ss_dssp EEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHH------------------
T ss_pred EEEEEEEcccccCcccccccccCCccccCcHHHHHHHHHHHHHhCCCeEEEEcCCCCCCCHh------------------
Confidence 468899999986421 1 2345555555555 67889999853211
Q ss_pred ccchhhHHHHHHHHhhhccccCCCEEEecCCcccccCccchhhHHhhcccCCCCCCC----------CCCCcceEEEEeC
Q 039280 233 IQETYQPRWDYWGRYMQPLVSNVPTMVIEGEHEIERQAENQTFAAYSSRFAFPSEES----------GSSSSLYYSFNAG 302 (487)
Q Consensus 233 ~~~~y~~~w~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~----------~~~~~~yYsf~~g 302 (487)
... .+.....+.|+.+ -.=..++||||+... ...+..+.....+|.-.. ...-..|.-++.+
T Consensus 64 -~~~--~~g~~~~~~~n~~---gyDa~~~GNHEfd~G--~~~l~~~~~~~~~p~l~aNi~~~~~~~~~~~~~~y~i~~~~ 135 (302)
T d2z1aa2 64 -FNQ--YRGLADRYFMHRL---RYRAMALGNHEFDLG--PGPLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVG 135 (302)
T ss_dssp -HHH--HTTHHHHHHHHHT---TCCEEECCGGGGTTC--HHHHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEET
T ss_pred -Hhh--hcchhHHHHHHhc---ccccccccchhhhcC--hhHHHHHhhhcccceeEeeeeccccccccCccceeEEEEEC
Confidence 000 0111122333333 123679999999642 233444333333331100 0123346678889
Q ss_pred CEEEEEEc--Ccc-----------cCCCChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHH
Q 039280 303 GIHFVMLS--AYI-----------DYDKSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDL 369 (487)
Q Consensus 303 ~v~fi~Ld--t~~-----------~~~~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l 369 (487)
++++-++. +.. .+....+..++..++|++ ....-+|++.|..... . ..+
T Consensus 136 g~kIgiiG~~t~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~---~~~DiiV~l~H~g~~~--------d-------~~l 197 (302)
T d2z1aa2 136 GERVGIIGLTTPDTREISNPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYGE--------D-------LKL 197 (302)
T ss_dssp TEEEEEEEEECTTHHHHSCCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHH--------H-------HHH
T ss_pred CeEEEEEecccccccccccccCcccccCHHHHHHHHHHHhhc---cCCCEEEEeeccCcch--------h-------hHH
Confidence 86654443 311 001123344455555554 3345699999976421 1 123
Q ss_pred HHHc-CCcEEEeCccccceec
Q 039280 370 LYYY-GVDIVFNGHVHAYERS 389 (487)
Q Consensus 370 ~~~~-~VdlvlsGH~H~yeR~ 389 (487)
.++. +||++++||.|.....
T Consensus 198 a~~~~giD~ii~gh~h~~~~~ 218 (302)
T d2z1aa2 198 ARRLVGVQVIVGGHSHTLLGS 218 (302)
T ss_dssp HTTCSSCCEEEECSSCCCBSC
T ss_pred HhcCCCeeeeecCccceeecc
Confidence 3333 6999999999975543
|
| >d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.47 E-value=0.00019 Score=55.47 Aligned_cols=88 Identities=17% Similarity=0.192 Sum_probs=52.9
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
+..|..+++.-.+ +++|.|+|.-.....+.. ...=.|+|....+. ... ..
T Consensus 3 p~~p~~L~~~~~~-~~si~vsW~~p~~~~~~~-------~i~Y~i~~~~~~~~--~~~------~~-------------- 52 (94)
T d1x5aa1 3 SLSGLSLKLVKKE-PRQLELTWAGSRPRNPGG-------NLSYELHVLNQDEE--WHQ------MV-------------- 52 (94)
T ss_dssp CCCSCCCCEEEEE-TTEEEEECCCCCSSCCSS-------CCEEEEEEECSSCE--EEE------EE--------------
T ss_pred CCCCCceEEEEcC-CCEEEEEEecccCCCCCc-------EEEEEEEEecCCce--EEE------ee--------------
Confidence 4457777777665 899999997543211100 01223444433221 000 00
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCC---CCCcCceEEEEcCC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPS---ISAMSSSHYFRTMP 164 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~---~~~~s~~~~F~T~p 164 (487)
.-.+++|+||+|+|.|.+||...+ .+.+|+...|+|.|
T Consensus 53 ~~t~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~T~P 93 (94)
T d1x5aa1 53 LEPRVLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSP 93 (94)
T ss_dssp SSSEEEEESCCSSCEEEEEEEEECSSSCCCCCCCEEEECCC
T ss_pred ccCEEEECCCCCCCEEEEEEEEEcCCcCcCCCCCEEEEeCC
Confidence 012567999999999999995432 23688899999986
|
| >d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.35 E-value=0.00058 Score=52.17 Aligned_cols=35 Identities=20% Similarity=0.221 Sum_probs=27.8
Q ss_pred EEEeCCCCCCCEEEEEEecCCCC---CcCceEEEEcCC
Q 039280 130 HVLITGLQPNTLYEYECGDPSIS---AMSSSHYFRTMP 164 (487)
Q Consensus 130 ~v~l~gL~P~T~Y~Y~vg~~~~~---~~s~~~~F~T~p 164 (487)
..+|+||+|+|.|.+||...+.. .+|+...|+|.|
T Consensus 58 ~~~v~~L~p~t~Y~~rV~A~n~~G~s~~S~~~~~~T~p 95 (96)
T d1x5xa1 58 AYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCP 95 (96)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCEEEECCCEEEECCC
T ss_pred EEEECCCCCCCEEEEEEEEEcCCcEeCCCCCEEEEeCc
Confidence 46789999999999999654332 477788999987
|
| >d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.15 E-value=0.00075 Score=51.49 Aligned_cols=35 Identities=29% Similarity=0.254 Sum_probs=27.4
Q ss_pred EEEeCCCCCCCEEEEEEecCC---CCCcCceEEEEcCC
Q 039280 130 HVLITGLQPNTLYEYECGDPS---ISAMSSSHYFRTMP 164 (487)
Q Consensus 130 ~v~l~gL~P~T~Y~Y~vg~~~---~~~~s~~~~F~T~p 164 (487)
..+|++|+|+|.|.+||...+ ...+|+...|+|+|
T Consensus 55 ~~~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~~~~~Tpp 92 (93)
T d1x4xa1 55 SYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPP 92 (93)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCCCCBCCCEEEECCC
T ss_pred EEEEcccceeeEEEEEEEEEECCcCcCCCCcEEEEeCC
Confidence 456899999999999995432 23678888999976
|
| >d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.06 E-value=0.0029 Score=47.58 Aligned_cols=80 Identities=18% Similarity=0.143 Sum_probs=49.5
Q ss_pred CCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCcE
Q 039280 49 QPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGII 128 (487)
Q Consensus 49 ~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~ 128 (487)
.|..+.+.-.. .+++.|+|.-.... ...-.|+|....+......... . ..+-.
T Consensus 3 aP~~l~v~~~~-~~sv~v~W~~p~~~-----------~~~y~v~y~~~~~~~~~~~~~~-----~----------~~~~~ 55 (92)
T d1tdqa2 3 APKNLRVGSRT-ATSLDLEWDNSEAE-----------AQEYKVVYSTLAGEQYHEVLVP-----K----------GIGPT 55 (92)
T ss_dssp CCEEEEEEEEC-SSCEEEEEECCSSC-----------CSEEEEEEEETTCCCCEEEEEE-----C----------CSSSE
T ss_pred cCcCCEEEEec-CCEEEEEEEecCCc-----------ccceEEEEEEcCCCcceeeEEE-----e----------cCCCe
Confidence 58888876654 68999999764321 1345678876554322221110 0 12245
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCcC
Q 039280 129 HHVLITGLQPNTLYEYECGDPSISAMS 155 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~~~~~~s 155 (487)
..++|+||+|+|.|.++|..-...+.|
T Consensus 56 ~~~~i~~L~p~t~Y~~~V~a~~~~g~s 82 (92)
T d1tdqa2 56 TKTTLTDLVPGTEYGVGISAVMNSKQS 82 (92)
T ss_dssp EEEEECSCCTTCEEEEEEEEEETTEEC
T ss_pred eEEEECCccCCCEEEEEEEEEeCCCEe
Confidence 678999999999999999654333333
|
| >d1qg3a1 b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.06 E-value=0.0026 Score=48.05 Aligned_cols=86 Identities=16% Similarity=0.082 Sum_probs=54.2
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
..|..+.+.-.+ ++++.|+|.-.... ...-.|+|.............. ..
T Consensus 3 ~aP~n~~~~~~s-~~si~l~W~~p~~~-----------~~~Y~i~y~~~~~~~~~~~~~~------------------~~ 52 (92)
T d1qg3a1 3 GAPQNPNAKAAG-SRKIHFNWLPPSGK-----------PMGYRVKYWIQGDSESEAHLLD------------------SK 52 (92)
T ss_dssp CCCEEEEEEECS-TTCEEEEEECCSSC-----------CCEEEEEEEETTSCGGGCEEEE------------------ES
T ss_pred CcCCCCEEEEcc-CCEEEEEEEecCCC-----------ccceEEeeeeccccccEEEEec------------------CC
Confidence 358888887654 78999999754311 1234677766544322221100 11
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCcCceEEEEcC
Q 039280 128 IHHVLITGLQPNTLYEYECGDPSI---SAMSSSHYFRTM 163 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~~---~~~s~~~~F~T~ 163 (487)
...+.|++|+|+|.|.+||..-+. +.+|+...|+|.
T Consensus 53 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~ 91 (92)
T d1qg3a1 53 VPSVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTH 91 (92)
T ss_dssp SSEEEECSCCTTCEEEEEEEEECSSCBCCCCCCEEEECC
T ss_pred ccEEEECCCCCCcEEEEEEEEEeCCcCcCCCCCEEEEcC
Confidence 236778999999999999954322 357778888874
|
| >d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 8 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.02 E-value=0.0013 Score=50.78 Aligned_cols=89 Identities=16% Similarity=0.178 Sum_probs=54.4
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
..|..|++.-.+ .+++.|+|......-| ....=.|+|....+....... +. ..
T Consensus 5 ~~p~~~~~~~~s-~~si~v~W~~P~~~~g--------~i~~Y~v~y~~~~~~~~~~~~-----~~-------------~~ 57 (98)
T d1x5la1 5 SQVVVIRQERAG-QTSVSLLWQEPEQPNG--------IILEYEIKYYEKDKEMQSYST-----LK-------------AV 57 (98)
T ss_dssp CCCCCEECSCBC-SSCEEEEECCCSCCCS--------CCCEEEEEEEESSSCCSSCEE-----EE-------------ES
T ss_pred CCCCceEEEecc-CCEEEEEEECCCCCCC--------CEEEEEEEeecccccceeeEE-----ec-------------CC
Confidence 457778776555 6899999986542111 012334777665432221110 00 11
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCcCceEEEEcC
Q 039280 128 IHHVLITGLQPNTLYEYECGDPSI---SAMSSSHYFRTM 163 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~~---~~~s~~~~F~T~ 163 (487)
.+..+|+||+|+|.|.+||...+. +.||+...|+|.
T Consensus 58 ~~~~~i~~L~p~t~Y~~~V~a~n~~G~g~~S~~v~~~T~ 96 (98)
T d1x5la1 58 TTRATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETG 96 (98)
T ss_dssp SSEEEECSCCTTCEEEECEEEEETTEECCCCCCEEEECC
T ss_pred ceEEEECCCCCCCEEEEEEEEEcCCCCcCCCCCEEEEcC
Confidence 246789999999999999954322 267888899985
|
| >d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.93 E-value=0.0051 Score=48.01 Aligned_cols=93 Identities=16% Similarity=0.161 Sum_probs=55.8
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
+..|+.+++.... +++|.|+|.-.....+. ....-.|.|............ . ...
T Consensus 11 P~~P~~l~~~~~~-~~sv~lsW~~P~~~~~~-------~i~~Y~v~~~~~~~~~~~~~~--------~---------~~~ 65 (107)
T d1x5fa1 11 PSAPRDVVASLVS-TRFIKLTWRTPASDPHG-------DNLTYSVFYTKEGIARERVEN--------T---------SHP 65 (107)
T ss_dssp CCCCEEEEEEEEC-SSCEEEEEECCSSCSSC-------CSSEEEEEEEETTCCCCEEEE--------C---------SST
T ss_pred CcCCCccEEEEec-CCEEEEEEECCccCCCC-------ceEEEEEEEEeCCCCceEEEE--------E---------eCC
Confidence 3568888887655 78999999753211110 012335666554432222110 0 011
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCCCC---CcCceEEEEcCC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPSIS---AMSSSHYFRTMP 164 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~~~---~~s~~~~F~T~p 164 (487)
....++|++|+|+|.|.+||...+.. .+|....++|.|
T Consensus 66 ~~~~~~~~~L~p~t~Y~~rV~A~n~~G~g~~S~~i~v~T~~ 106 (107)
T d1x5fa1 66 GEMQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQP 106 (107)
T ss_dssp TCSEEEECSCCTTCEEEEEEEEECSSCEEEECCCEEEECCC
T ss_pred CccEEEecCCCCCCEEEEEEEEEeCCCCcCCCCCEEEECCC
Confidence 23568899999999999999654433 356677888865
|
| >d1t70a_ d.159.1.9 (A:) Putative phosphatase DR1281 {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Putative phosphatase DR1281 species: Deinococcus radiodurans [TaxId: 1299]
Probab=96.80 E-value=0.022 Score=51.29 Aligned_cols=188 Identities=13% Similarity=0.106 Sum_probs=106.8
Q ss_pred cEEEEEecCCCCCCh---HHHHHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhhh
Q 039280 173 NRIAVVGDLGLTYNT---TTTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYMQ 249 (487)
Q Consensus 173 ~~f~v~gD~~~~~~~---~~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~~ 249 (487)
|||+++||+=..... .+.|.++. .+.||||..|..+-. |..- . +...+++++.
T Consensus 1 MkILfiGDIvG~~Gr~~v~~~Lp~lk-~~~DfVIaNgENaa~------G~Gi-----------t----~~~~~~l~~~-- 56 (255)
T d1t70a_ 1 MRVLFIGDVFGQPGRRVLQNHLPTIR-PQFDFVIVNMENSAG------GFGM-----------H----RDAARGALEA-- 56 (255)
T ss_dssp CEEEEECCBBHHHHHHHHHHHHHHHG-GGCSEEEEECTBTTT------TSSC-----------C----HHHHHHHHHH--
T ss_pred CeEEEEecCCCHHHHHHHHHHhHHHH-hhCCEEEECCccCCC------CcCC-----------C----HHHHHHHHHc--
Confidence 689999998443222 22344443 468999999999842 3211 0 1223333332
Q ss_pred ccccCCCEEEecCCcccccCccchhhHHhhc----ccCCCCCCC--CCCCcceEEEEeCCEEEEEEcC--cccCCCChHH
Q 039280 250 PLVSNVPTMVIEGEHEIERQAENQTFAAYSS----RFAFPSEES--GSSSSLYYSFNAGGIHFVMLSA--YIDYDKSSDQ 321 (487)
Q Consensus 250 ~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~----~f~~P~~~~--~~~~~~yYsf~~g~v~fi~Ldt--~~~~~~~~~Q 321 (487)
.+- ..+.|||=+.. +....|.. +..-|.+-+ ...+..|+.|+..+.++.++|- +......+.-
T Consensus 57 ----GvD-viT~GNH~wdk----kei~~~i~~~~~~ilRP~N~p~~~~PG~G~~i~~~~g~ki~ViNl~Gr~fM~~~d~P 127 (255)
T d1t70a_ 57 ----GAG-CLTLGNHAWHH----KDIYPMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNP 127 (255)
T ss_dssp ----TCS-EEECCTTTTSS----TTHHHHHHTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCH
T ss_pred ----CCc-EEEcCchhhcc----hhHHHHHhhcchhhhhhhccCCCCCCCceEEEEeeccCcEEEEEeccccccCcccCH
Confidence 233 46889998753 23333331 233444422 2356678888888877766663 3322333444
Q ss_pred HHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceecccccCCccCCCC
Q 039280 322 YKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCG 401 (487)
Q Consensus 322 ~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~p~~~~~~~~~g 401 (487)
++-+++.|++. +.+.+||=+|.=. .....+| -.+-+-+|.+|+-=|+|.-.- +..+=|.|
T Consensus 128 F~~~d~~l~~~---~~~~i~VDfHaEa-----------TSEK~A~-g~~ldGrvsav~GTHTHV~Ta-----D~rIlp~G 187 (255)
T d1t70a_ 128 FRTMDALLERD---DLGTVFVDFHAEA-----------TSEKEAM-GWHLAGRVAAVIGTHTHVPTA-----DTRILKGG 187 (255)
T ss_dssp HHHHHHHTTCS---SCCEEEEEEECSC-----------HHHHHHH-HHHHTTSSSEEEEESSCSCBS-----CCEEETTT
T ss_pred HHHHHHHHhhc---CCCeEEEEccchh-----------HHHHHHH-HhhhcCcEEEEEecCcccccc-----cceEecCC
Confidence 55567777653 4456888888422 1112233 344456899999999996432 22234689
Q ss_pred cEEEEe-CCcccc
Q 039280 402 PVYILV-GDGGNV 413 (487)
Q Consensus 402 ~vyIv~-G~gG~~ 413 (487)
+-|++- |.-|..
T Consensus 188 Tay~TDvGMtG~~ 200 (255)
T d1t70a_ 188 TAYQTDAGFTGPH 200 (255)
T ss_dssp EEEESCCCCBEES
T ss_pred cEEEecCccccch
Confidence 999863 555543
|
| >d2b5ib2 b.1.2.1 (B:104-207) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-2 receptor beta chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.77 E-value=0.0031 Score=48.62 Aligned_cols=94 Identities=18% Similarity=0.128 Sum_probs=54.5
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
..|..+++..-. .+++.|+|.......+. .....-.|+|....+..... . .. .....
T Consensus 4 ~pP~~l~v~~~~-~~s~~l~W~~p~~~~~~------~~~~~~~v~~~~~~~~~~~~-~--~~-------------~~~~~ 60 (104)
T d2b5ib2 4 MAPISLQVVHVE-THRCNISWEISQASHYF------ERHLEFEARTLSPGHTWEEA-P--LL-------------TLKQK 60 (104)
T ss_dssp CCCEEEEEEEEC-SSCEEEEEECCSCCGGG------TTCEEEEEEEECTTSCSTTS-C--CE-------------EECSC
T ss_pred CCCCCcEEEEEe-CCEEEEEEccccccccc------cceeEEEEEEecccccceee-e--EE-------------ecCCC
Confidence 358999988776 68999999775431110 00011235555443321110 0 00 00112
Q ss_pred EEEEEeCCCCCCCEEEEEEecC---C-C---CCcCceEEEEcCC
Q 039280 128 IHHVLITGLQPNTLYEYECGDP---S-I---SAMSSSHYFRTMP 164 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~---~-~---~~~s~~~~F~T~p 164 (487)
-..+.|+||+|+|.|.+||... + . ..||+...|+|.|
T Consensus 61 ~~~~~i~~L~p~t~Y~~rVra~~~~g~~g~wS~wS~~v~~~T~P 104 (104)
T d2b5ib2 61 QEWICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKP 104 (104)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEESCCSSCCCCCCCCCEEEECCC
T ss_pred cEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCcCCEEEECCC
Confidence 3457889999999999999542 1 1 2467778999986
|
| >d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.74 E-value=0.0043 Score=47.33 Aligned_cols=88 Identities=11% Similarity=0.060 Sum_probs=51.4
Q ss_pred CCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCcE
Q 039280 49 QPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGII 128 (487)
Q Consensus 49 ~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~ 128 (487)
.|.++++.-..+.++|.|+|.-... +....=.|+|....+....... ... .+..
T Consensus 4 PP~~l~v~~~~~ts~i~v~W~~p~~----------~~i~~Y~v~y~~~~~~~~~~~~---~~~-------------~~~~ 57 (94)
T d1fnfa1 4 PPTNLHLEANPDTGVLTVSWERSTT----------PDITGYRITTTPTNGQQGNSLE---EVV-------------HADQ 57 (94)
T ss_dssp CCEEEEEEECSSSSCEEEEEECCSC----------SSCCEEEEEEEETTTCSSCCEE---EEE-------------CTTC
T ss_pred cCcCcEEEEecCCCEEEEEeeCCCC----------CCeeEEEEEEEEecccCceEEE---EEe-------------CCCc
Confidence 4899998765556679999975431 1112345677755432211110 000 1123
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCcCceEEEEc
Q 039280 129 HHVLITGLQPNTLYEYECGDPSISAMSSSHYFRT 162 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~~~~~~s~~~~F~T 162 (487)
..++|+||+|||.|..+|..-...+.|...+.+.
T Consensus 58 ~~~~i~~L~p~t~Y~v~V~a~~~~g~s~p~s~t~ 91 (94)
T d1fnfa1 58 SSCTFDNLSPGLEYNVSVYTVKDDKESVPISDTI 91 (94)
T ss_dssp CEEECCCCCTTSCEEEEEEEEETTEECCCEEEEE
T ss_pred cEEEECCCCCCCEEEEEEEEEcCCCEeCCEEEEE
Confidence 4788999999999999996543335555444443
|
| >d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.73 E-value=0.0035 Score=47.97 Aligned_cols=88 Identities=19% Similarity=0.272 Sum_probs=54.0
Q ss_pred CCceEEEeeccC-CCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 49 QPEQIFVSLSAR-YDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 49 ~P~qi~l~~~~~-~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
.|.++.++.... ++++.|+|.-.... ....=.|+|....+...... ... ++-
T Consensus 2 aP~~~~vt~~~~~~~s~~vsW~~P~~~----------~i~~Y~i~y~~~~~~~~~~~----~~v-------------~~~ 54 (93)
T d1owwa_ 2 GPVEVFITETPSQPNSHPIQWNAPQPS----------HISKYILRWRPKNSVGRWKE----ATI-------------PGH 54 (93)
T ss_dssp CCCEEECCCCSSCTTCEEEEEECCSSS----------CEEEEEEEEEETTCSSCCEE----EEE-------------CSS
T ss_pred cCcccEEEEccCCCCEEEEEeeccccc----------ceeEEEEEEeeccccceeee----ecc-------------CCC
Confidence 488888887764 58999999875310 01234567776543222110 000 123
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCcCc--eEEEEcC
Q 039280 128 IHHVLITGLQPNTLYEYECGDPSISAMSS--SHYFRTM 163 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~~~~~s~--~~~F~T~ 163 (487)
...++|+||+|+|.|..+|..-...+.|+ ...|+|.
T Consensus 55 ~~~~~l~gL~P~t~Y~v~v~av~~~G~s~~~~~~~tT~ 92 (93)
T d1owwa_ 55 LNSYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTTT 92 (93)
T ss_dssp CCEEEECSCCSSEEEEEEEEEEESSSCEEEEEEEEEEC
T ss_pred ccEEEECCcccCcEEEEEEEEEeCCCccCcEEEEEEec
Confidence 45679999999999999996543334443 4677774
|
| >d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-B receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.72 E-value=0.0019 Score=49.08 Aligned_cols=36 Identities=22% Similarity=0.458 Sum_probs=28.3
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCcCceEEEEcCC
Q 039280 129 HHVLITGLQPNTLYEYECGDPSI---SAMSSSHYFRTMP 164 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~~~---~~~s~~~~F~T~p 164 (487)
..++|++|+|+|.|.+||...+. +.+|+...|+|.|
T Consensus 56 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 94 (95)
T d2djsa1 56 NTARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLT 94 (95)
T ss_dssp SEEEEESCCTTCEEEEEEEEEESSCEEEECCCEEEECCC
T ss_pred cEEEEeecCCccEEEEEEEEEcCCCCCCCCCCEEEEeCC
Confidence 35789999999999999954332 2567888999986
|
| >d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.69 E-value=0.0085 Score=46.45 Aligned_cols=94 Identities=17% Similarity=0.175 Sum_probs=53.9
Q ss_pred CCCceEEEeec-cCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 48 FQPEQIFVSLS-ARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 48 ~~P~qi~l~~~-~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
..|..+.+... ..++++.|+|.-....-| + ...-.|.|....+...... ....+ .+
T Consensus 13 ~pP~~~~v~~~~~~~~sv~v~W~~P~~~~g-------~-i~~Y~i~~~~~~~~~~~~~--~~~~~-------------~~ 69 (111)
T d1x5ka1 13 SPPKDVTVVSKEGKPKTIIVNWQPPSEANG-------K-ITGYIIYYSTDVNAEIHDW--VIEPV-------------VG 69 (111)
T ss_dssp SCCEEEEEEECSSCTTCEEEEEECCSCCSS-------C-CCEEEEEEESCSSSCTTTS--EEEEE-------------ST
T ss_pred CCCCCcEEEEecCCCCEEEEEEEccccCCC-------c-eeeeEEeeeecCCCCccee--EEEEe-------------CC
Confidence 34888887654 446899999985432111 0 1123455554433211100 00001 11
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCCC---CCcCceEEEEcCC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPSI---SAMSSSHYFRTMP 164 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~~---~~~s~~~~F~T~p 164 (487)
-.+..+|++|+|+|.|.+||...+. +.+|+...|+|..
T Consensus 70 ~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~ 110 (111)
T d1x5ka1 70 NRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 110 (111)
T ss_dssp TCSEEEECSCCSSSEEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred CeeEEEECCCCCCCEEEEEEEEEcCCCCcCCCCCEEEECCC
Confidence 2335678999999999999964332 3578888998864
|
| >d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.61 E-value=0.0037 Score=48.27 Aligned_cols=90 Identities=19% Similarity=0.198 Sum_probs=52.2
Q ss_pred CCCCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccc
Q 039280 45 GEGFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYT 124 (487)
Q Consensus 45 ~~~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~ 124 (487)
|.+..|..+++.-.. .+++.|+|..... + + ...=.|+|............ ..
T Consensus 9 ~vP~~P~~~~~~~~~-~~si~l~W~~p~~--~-------~-i~~Y~i~y~~~~~~~~~~~~-----------------~~ 60 (102)
T d1x5za1 9 GVPGQPLNFKAEPES-ETSILLSWTPPRS--D-------T-IANYELVYKDGEHGEEQRIT-----------------IE 60 (102)
T ss_dssp CCCCCCEEEEEECSS-SSEEEEEEECCSC--C-------C-CCEEEECBEESSSCCCBCCE-----------------EC
T ss_pred CCCcCCCCeEEEEcc-CCEEEEEEECCCC--C-------C-ccceEEEEEeCCCCceEEEE-----------------cC
Confidence 334568888887544 6899999976431 1 0 11234455443322111000 00
Q ss_pred cCcEEEEEeCCCCCCCEEEEEEecCCCC---CcCceEEEEcCC
Q 039280 125 SGIIHHVLITGLQPNTLYEYECGDPSIS---AMSSSHYFRTMP 164 (487)
Q Consensus 125 ~~~~h~v~l~gL~P~T~Y~Y~vg~~~~~---~~s~~~~F~T~p 164 (487)
-....+|+||+|+|.|.+||..-+.. .+|+...++|+.
T Consensus 61 --~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~e 101 (102)
T d1x5za1 61 --PGTSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQ 101 (102)
T ss_dssp --SSSEEEEECCCTTCEEEECEEEECSSCEEEECCCEEEECCC
T ss_pred --CcCEEEECCCCCCCEEEEEEEEEcCCCEeCCCCCEEEEcCC
Confidence 11245789999999999999643322 466778888863
|
| >d1uc6a_ b.1.2.1 (A:) Ciliary neurotrophic factor receptor alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ciliary neurotrophic factor receptor alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.58 E-value=0.0098 Score=46.20 Aligned_cols=90 Identities=11% Similarity=0.022 Sum_probs=49.9
Q ss_pred CCceEEEeec-cCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 49 QPEQIFVSLS-ARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 49 ~P~qi~l~~~-~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
.|..+.+... ..++++.|+|.......... . -...-.++|....+.....+. ...
T Consensus 10 PP~~l~v~~~~~~~~~l~l~W~~P~~~~~~~----~-~~~~y~~~~~~~~~~~~~~~~-------------------~~~ 65 (109)
T d1uc6a_ 10 PPENVVARPVPSNPRRLEVTWQTPSTWPDPE----S-FPLKFFLRYRPLILDQWQHVE-------------------LSN 65 (109)
T ss_dssp CCEEEEEEECTTCTTCEEEEEECCTTCCCTT----T-TTBCEEEEEEESSSCCCCCEE-------------------ESS
T ss_pred CCCCCEEEEEecCCCEEEEEEeCCcccCCCC----e-eEEEEEEEEeecCCCceEEec-------------------cCC
Confidence 3889988754 44688999998754210000 0 011234555554433222211 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC--C---CcCceEEEEc
Q 039280 128 IHHVLITGLQPNTLYEYECGDPSI--S---AMSSSHYFRT 162 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~~--~---~~s~~~~F~T 162 (487)
....+|.+|+|+|.|.+||..... + .||+...++|
T Consensus 66 ~~~~~i~~L~~~t~Y~~rVrA~~~~~g~wS~WS~~~~~tt 105 (109)
T d1uc6a_ 66 GTAHTITDAYAGKEYIIQVAAKDNEIGTWSDWSVAAHATP 105 (109)
T ss_dssp CSEEEETTCCSSSCEEEEEECCBSSSCCCCCCCEEEEECC
T ss_pred ceeEEeCCCCCCCEEEEEEEEEECCCCCcCCCCCCEEeEC
Confidence 235678999999999999965321 2 4555555544
|
| >d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type III domain from chitinase A1. species: Bacillus circulans [TaxId: 1397]
Probab=96.58 E-value=0.0059 Score=45.86 Aligned_cols=80 Identities=19% Similarity=0.304 Sum_probs=45.9
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
..|..+.+.--. ++++.|+|.-... ......|-...+.. .. ... ..
T Consensus 5 ~~P~~l~~~~~~-~~sv~lsW~~p~~-------------~~~i~~Y~i~~~~~-~~--~~~----------------~~- 50 (88)
T d1k85a_ 5 TAPTNLASTAQT-TSSITLSWTASTD-------------NVGVTGYDVYNGTA-LA--TTV----------------TG- 50 (88)
T ss_dssp CCCEEEEEEEEC-SSCEEEEEECCSC-------------CSSEEEEEEEESSS-EE--EEE----------------SS-
T ss_pred CCCCCcEEEEec-CCEEEEEEeCCCC-------------CCCEEEEEEEccce-EE--Eec----------------CC-
Confidence 468888776443 6899999964321 12355554432110 00 000 00
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC----CCcCceEEEEc
Q 039280 128 IHHVLITGLQPNTLYEYECGDPSI----SAMSSSHYFRT 162 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~~----~~~s~~~~F~T 162 (487)
-..+++||+|+|.|.|||..-+. ..+|+...++|
T Consensus 51 -t~~~~~~L~p~t~Y~~~V~A~n~~G~~s~~S~~v~vtT 88 (88)
T d1k85a_ 51 -TTATISGLAADTSYTFTVKAKDAAGNVSAASNAVSVKT 88 (88)
T ss_dssp -SEEEECCCCSSCEEEEEEEEEETTTEECCCCCCEEEEC
T ss_pred -CEEEECCCCCCCEEEEEEEEEECCCCcCCCCcCEEEEC
Confidence 14578999999999999964321 24555666655
|
| >d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.57 E-value=0.009 Score=45.12 Aligned_cols=88 Identities=19% Similarity=0.175 Sum_probs=51.3
Q ss_pred CCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCcE
Q 039280 49 QPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGII 128 (487)
Q Consensus 49 ~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~ 128 (487)
.|..+.+.- .+.+++.|+|.-.... +.. ...=.|+|....+....... . ....
T Consensus 3 ~P~~~~~~~-~~~~sv~l~W~~p~~~-~~~-------I~~Y~i~~~~~~~~~~~~~~-----~-------------~~~~ 55 (93)
T d2vkwa2 3 APKLEGQMG-EDGNSIKVNLIKQDDG-GSP-------IRHYLVRYRALSSEWKPEIR-----L-------------PSGS 55 (93)
T ss_dssp CCEEEEEEC-TTSSCEEEEEECCCCT-TSC-------CCEEEEEEEETTSCCCCCEE-----E-------------CTTC
T ss_pred CCccCEeEE-cCCCEEEEEeeCCCCC-cCc-------eEEEEEEeeecCcceeeeee-----c-------------cCCc
Confidence 477766543 3358999999876421 110 12345677765543221100 0 1122
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCcCc--eEEEEcC
Q 039280 129 HHVLITGLQPNTLYEYECGDPSISAMSS--SHYFRTM 163 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~~~~~~s~--~~~F~T~ 163 (487)
..++|++|+|+|.|.+||..-+..+.|+ ...|+|.
T Consensus 56 ~~~~i~~L~p~t~Y~~~V~A~N~~G~s~ps~~~~~T~ 92 (93)
T d2vkwa2 56 DHVMLKSLDWNAEYEVYVVAENQQGKSKAAHFVFRTA 92 (93)
T ss_dssp CEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECC
T ss_pred eEEEEeccccceEEEEEEEEEcCCCCcCCEeEEEEec
Confidence 3678899999999999996554344443 5667774
|
| >d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.57 E-value=0.0034 Score=48.08 Aligned_cols=92 Identities=23% Similarity=0.271 Sum_probs=51.5
Q ss_pred CCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCcE
Q 039280 49 QPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGII 128 (487)
Q Consensus 49 ~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~ 128 (487)
.|..+.+.-.+ ++++.|+|.......+..+. ....-.|+|...+........ . ....
T Consensus 4 pP~~v~~~~~s-~tsi~v~W~~p~~~~~~~~~----~~~~y~v~~~~~~~~~~~~~~-----~-------------~~~~ 60 (100)
T d1x5ja1 4 PPVGVQASILS-HDTIRITWADNSLPKHQKIT----DSRYYTVRWKTNIPANTKYKN-----A-------------NATT 60 (100)
T ss_dssp CCEEEEEEEEE-TTEEEEEEECTTSCSSSCCC----SSCEEEEEECBSSSSSCCCEE-----C-------------CBCS
T ss_pred CCcCeEEEEec-CCEEEEEEcCCcccccccee----eEEEEEEEeeecCCCcceeEe-----c-------------CCCc
Confidence 48888886655 78999999864321111000 011234555554432221110 0 0011
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCcCceEEEEcC
Q 039280 129 HHVLITGLQPNTLYEYECGDPSI---SAMSSSHYFRTM 163 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~~~---~~~s~~~~F~T~ 163 (487)
..++|+||+|+|.|.+||..... +.+|....++|.
T Consensus 61 ~~~~i~~L~p~t~Y~~~V~a~n~~g~s~~S~~~~~~T~ 98 (100)
T d1x5ja1 61 LSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTF 98 (100)
T ss_dssp SEEEEESCCTTCEECCEEEEECSSCBCCCCCCCCEECC
T ss_pred cEEEECCCCCCCEEEEEEEEEeCCcCcCCCCeEEEEec
Confidence 25678999999999999954332 256777777764
|
| >d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.56 E-value=0.0056 Score=45.88 Aligned_cols=72 Identities=15% Similarity=0.132 Sum_probs=46.1
Q ss_pred CCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCcE
Q 039280 49 QPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGII 128 (487)
Q Consensus 49 ~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~ 128 (487)
.|.++.+.-.. .++|.|+|...... ...-.|+|............ +. ...
T Consensus 3 ~P~~l~v~~v~-~~s~~l~W~~~~~~-----------~~~Y~i~~~~~~~~~~~~~~-----~~-------------~~~ 52 (88)
T d1qr4a2 3 SPKGISFSDIT-ENSATVSWTPPRSR-----------VDSYRVSYVPITGGTPNVVT-----VD-------------GSK 52 (88)
T ss_dssp CCSCEEEESCC-SSCEEEEECCCSSC-----------CSEEEEEEEETTCCCCEEEE-----EE-------------TTC
T ss_pred CCcceEEEEec-CCEEEEEEEcccEe-----------eceEEEEEEeccCCceEEEE-----ec-------------CCc
Confidence 58888777665 68999999654311 12456777766543322211 10 112
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 039280 129 HHVLITGLQPNTLYEYECGDPS 150 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~~ 150 (487)
..++|+||.|+|.|.++|..-.
T Consensus 53 ~~~~i~~L~p~t~Y~~~V~a~~ 74 (88)
T d1qr4a2 53 TRTKLVKLVPGVDYNVNIISVK 74 (88)
T ss_dssp CEEEECSCCSSCEEEEEEEEEE
T ss_pred cEEEECCCCCCCEEEEEEEEEe
Confidence 3678999999999999996543
|
| >d1erna2 b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Erythropoietin (EPO) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.55 E-value=0.011 Score=45.65 Aligned_cols=92 Identities=13% Similarity=0.052 Sum_probs=52.7
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
..|..+.+....+++++.|+|.......+. ....=.|+|........... ... ..-
T Consensus 6 dPP~nl~v~~~~~~~~l~v~W~~P~~~~~~-------~~~~Y~v~y~~~~~~~~~~~----~~~-------------~~~ 61 (105)
T d1erna2 6 DAPVGLVARLADESGHVVLRWLPPPETPMT-------SHIRYEVDVSAGNGAGSVQR----VEI-------------LEG 61 (105)
T ss_dssp CCCEEEEEEECCC-CCEEEEEECSSSCSCG-------GGEEEEEEEEEC-CCCEEEE----EEE-------------CTT
T ss_pred CCCCCCEEEEecCCCcEEEEeeeccccccc-------eEEEEEEEEecCCCCCceEE----Eee-------------cCC
Confidence 458999999988788899999875321100 00123566655543222111 000 001
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC-----CC---CcCceEEEEcC
Q 039280 128 IHHVLITGLQPNTLYEYECGDPS-----IS---AMSSSHYFRTM 163 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~-----~~---~~s~~~~F~T~ 163 (487)
-..+.|.+|+|+|.|.+||.... .+ .||+...++|+
T Consensus 62 ~t~~~i~~L~p~t~Y~~rVRar~~~~~~~G~WSeWS~~v~~~tP 105 (105)
T d1erna2 62 RTECVLSNLRGRTRYTFAVRARMAEPSFGGFWSAWSEPVSLLTP 105 (105)
T ss_dssp CCEEEECSCCSSCEEEEEEEEEECSSSCCBCCCCCCCCEEEECC
T ss_pred ccEEEEeCCCCCcEEEEEEEEEECCCCCCCCCCCCCCCEEeeCc
Confidence 23577999999999999995421 11 45666777763
|
| >d2z06a1 d.159.1.10 (A:1-252) Hypothetical protein TTHA0625 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TTHA0625-like domain: Hypothetical protein TTHA0625 species: Thermus thermophilus [TaxId: 274]
Probab=96.55 E-value=0.065 Score=47.95 Aligned_cols=188 Identities=16% Similarity=0.244 Sum_probs=103.7
Q ss_pred cEEEEEecCCCCCChH---HHHHHHHHcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHhhh
Q 039280 173 NRIAVVGDLGLTYNTT---TTVAHLMSNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRYMQ 249 (487)
Q Consensus 173 ~~f~v~gD~~~~~~~~---~~l~~l~~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~~~ 249 (487)
|||+++||+=...... ..+.++. .+.||||..|..+-. |..- . +...+++++.
T Consensus 1 MkiLfiGDIvG~~Gr~~v~~~Lp~Lk-~~~DfVIaNgENaa~------G~Gi-----------t----~k~~~~L~~~-- 56 (252)
T d2z06a1 1 MRVLFIGDVMAEPGLRAVGLHLPDIR-DRYDLVIANGENAAR------GKGL-----------D----RRSYRLLREA-- 56 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHG-GGCSEEEEECTTTTT------TSSC-----------C----HHHHHHHHHH--
T ss_pred CeEEEEeccCCHHHHHHHHHHhHHHH-hhCCEEEEeeeccCC------CcCC-----------C----HHHHHHHHHh--
Confidence 6899999985432222 2234443 468999999999842 3211 0 1223333322
Q ss_pred ccccCCCEEEecCCcccccCccchhhHHhh--cccCCCCCCC-CCCCcceEEEEeCCEEEEEEcC--cccCCCChHHHHH
Q 039280 250 PLVSNVPTMVIEGEHEIERQAENQTFAAYS--SRFAFPSEES-GSSSSLYYSFNAGGIHFVMLSA--YIDYDKSSDQYKW 324 (487)
Q Consensus 250 ~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~--~~f~~P~~~~-~~~~~~yYsf~~g~v~fi~Ldt--~~~~~~~~~Q~~W 324 (487)
.+- ..+.|||=+... ....|. .+.-.|.|-+ +..+..|+.|+.++.++.++|- +......+.-++-
T Consensus 57 ----GVD-vIT~GNH~wdkk----ei~~~i~~~~llRP~N~p~~~PG~G~~i~~~~g~ki~ViNl~Gr~fm~~~d~PF~~ 127 (252)
T d2z06a1 57 ----GVD-LVSLGNHAWDHK----EVYALLESEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRA 127 (252)
T ss_dssp ----TCC-EEECCTTTTSCT----THHHHHHHSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHH
T ss_pred ----CCC-EEEcCcccccch----hhhhhhccccccchhhccCCCCCCcEEEEccCCceEEEEEecccccCCCCCCHHHH
Confidence 232 568899988643 222232 2233444432 2345668888988877776663 2222222233334
Q ss_pred HHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceecccccCCccCCCCcEE
Q 039280 325 LESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNYSLDPCGPVY 404 (487)
Q Consensus 325 L~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~p~~~~~~~~~g~vy 404 (487)
+++.|++ .+.+.+||=+|.=. .....+| -.+-+-+|.+|+-=|+|.-. .+..+=|+|+-|
T Consensus 128 ~d~~~~~---~~~~~i~VDfHaEa-----------TSEK~A~-g~~ldGrvsavvGTHTHV~T-----aD~rILp~GTay 187 (252)
T d2z06a1 128 LDRLLEE---EKADYVLVEVHAEA-----------TSEKMAL-AHYLDGRASAVLGTHTHVPT-----LDATRLPKGTLY 187 (252)
T ss_dssp HHHHHHH---CCCSEEEEEEECSC-----------HHHHHHH-HHHHBTTBSEEEEESSCSCB-----SCCEECTTSCEE
T ss_pred HHHHHhh---cCccEEEEEcccch-----------hhhheee-eEecCCCEEEEEecCccccc-----cccEEecCCeEE
Confidence 4444544 24556888888422 1112233 34455689999999999632 222334789999
Q ss_pred EEe-CCcccc
Q 039280 405 ILV-GDGGNV 413 (487)
Q Consensus 405 Iv~-G~gG~~ 413 (487)
++- |.-|..
T Consensus 188 iTDvGM~G~~ 197 (252)
T d2z06a1 188 QTDVGMTGTY 197 (252)
T ss_dssp ESCCCCBEES
T ss_pred EccCccccch
Confidence 863 555553
|
| >d2cuha1 b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.54 E-value=0.007 Score=46.55 Aligned_cols=88 Identities=14% Similarity=-0.013 Sum_probs=52.4
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
..|.++++.--. ++++.|+|...... ...=.|+|...++... .. ... +-
T Consensus 2 ~~P~~l~~~~~t-~~si~l~W~~p~~~-----------i~~Y~v~~~~~~~~~~-~~-----~~~-------------~~ 50 (102)
T d2cuha1 2 DGPTQLRALNLT-EGFAVLHWKPPQNP-----------VDTYDIQVTAPGAPPL-QA-----ETP-------------GS 50 (102)
T ss_dssp SSCEEEECCCCS-SSCEEEEEECCSSC-----------CSEEEEEEECSSSCCE-EE-----EEE-------------TT
T ss_pred cCCCccEEEEeC-CCEEEEEEEeeecc-----------ceeeEEEEEeccccce-ee-----eee-------------ee
Confidence 357877775433 68999999764321 1234567765443211 11 010 11
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCcC--ceEEEEcCCCC
Q 039280 128 IHHVLITGLQPNTLYEYECGDPSISAMS--SSHYFRTMPVS 166 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~~~~~s--~~~~F~T~p~~ 166 (487)
...+.|+||+|+|.|.++|..-...+.| ....|+|.+.+
T Consensus 51 ~~~~~l~~L~p~t~Y~~~V~a~~~~~~s~~~~~~~~T~~~~ 91 (102)
T d2cuha1 51 AVDYPLHDLVLHTNYTATVRGLRGPNLTSPASITFTTGLEA 91 (102)
T ss_dssp CSEEEECSCCSSSEEEEEEEEEETTEECCCEEEEEESCCCC
T ss_pred eeeEEEccEEeeEEEEEEEEEEeCCCCcCCEEEEEECCCCC
Confidence 2367899999999999999643323333 34578887654
|
| >d2haza1 b.1.2.1 (A:489-589) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.53 E-value=0.0065 Score=46.73 Aligned_cols=35 Identities=31% Similarity=0.466 Sum_probs=28.0
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCcCceEEEEcCC
Q 039280 130 HVLITGLQPNTLYEYECGDPSI---SAMSSSHYFRTMP 164 (487)
Q Consensus 130 ~v~l~gL~P~T~Y~Y~vg~~~~---~~~s~~~~F~T~p 164 (487)
.++|+||+|+|.|.+||...+. +.+|+...|+|.|
T Consensus 63 ~~~i~~L~p~t~Y~frV~A~N~~G~g~~S~~~~~~T~P 100 (101)
T d2haza1 63 IVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 100 (101)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEecCCCCCeEEEEEEEEEeCCcCcCCCCceeEEeCC
Confidence 5789999999999999954332 2577888999987
|
| >d2d9qb2 b.1.2.1 (B:204-308) Granulocyte colony-stimulating factor (GC-SF) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.50 E-value=0.011 Score=45.64 Aligned_cols=80 Identities=18% Similarity=0.108 Sum_probs=46.7
Q ss_pred CCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCcEEEEEeCCCCCC
Q 039280 60 RYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGIIHHVLITGLQPN 139 (487)
Q Consensus 60 ~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~h~v~l~gL~P~ 139 (487)
+++++.|+|.-.....+ ....-.|+|....+......... + .+-.+..+|++|+|+
T Consensus 19 ~~~~v~l~W~pp~~~~~--------~~~~y~i~y~~~~~~~~~~~~~~---~-------------~~~~~~~~i~~L~p~ 74 (105)
T d2d9qb2 19 QAGCLQLSWEPWQPGLH--------INQKCELRHKPQRGEASWALVGP---L-------------PLEALQYELCGLLPA 74 (105)
T ss_dssp CCSCEEEEEECCGGGTT--------SCEEEEEEEEESSSCCCCEEEEE---E-------------CSCEEEEEECSCCSC
T ss_pred CCCeEEEEEcCCCCCCc--------eeEEEEEEEEecCCccceeeeec---c-------------cCCcceeEEecccCC
Confidence 47889999986542211 01234567776543322221110 0 123567789999999
Q ss_pred CEEEEEEecCC---C---CCcCceEEEEcC
Q 039280 140 TLYEYECGDPS---I---SAMSSSHYFRTM 163 (487)
Q Consensus 140 T~Y~Y~vg~~~---~---~~~s~~~~F~T~ 163 (487)
|.|.+||.... . ..||+..+++|.
T Consensus 75 t~Y~frVra~n~~g~G~~S~wS~~~~~~t~ 104 (105)
T d2d9qb2 75 TAYTLQIRCIRWPLPGHWSDWSPSLELRTT 104 (105)
T ss_dssp CCEEEEEEEEECSSCCCCCCCCCCEEECCC
T ss_pred eEEEEEEEEEeCCCCCCCcCCCCCEEEeCC
Confidence 99999994321 1 146777777763
|
| >d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.49 E-value=0.011 Score=44.27 Aligned_cols=74 Identities=18% Similarity=0.128 Sum_probs=45.9
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
..|.++++.--. .+++.|+|.-... ....-.|+|....+...... ... .+-
T Consensus 3 d~P~~l~v~~~s-~~s~~l~W~~p~~-----------~~~~y~v~~~~~~~~~~~~~----~~~-------------~~~ 53 (90)
T d1tena_ 3 DAPSQIEVKDVT-DTTALITWFKPLA-----------EIDGIELTYGIKDVPGDRTT----IDL-------------TED 53 (90)
T ss_dssp CCCEEEEEESCC-SSCEEEEEECCSS-----------CCSEEEEEEEETTCTTCCEE----EEE-------------ETT
T ss_pred CCCCCcEEEEec-CCEEEEEEEeCce-----------EeccEEEEEEEcCCCceeEE----EEe-------------cCC
Confidence 358888887544 6899999975331 11245677776543322111 001 112
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC
Q 039280 128 IHHVLITGLQPNTLYEYECGDPS 150 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~ 150 (487)
...++|.||+|+|.|.++|..-.
T Consensus 54 ~~~~~i~~L~p~t~Y~~~V~a~~ 76 (90)
T d1tena_ 54 ENQYSIGNLKPDTEYEVSLISRR 76 (90)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEE
T ss_pred cceeeEeeecCCCEEEEEEEEEe
Confidence 34678999999999999996543
|
| >d2b5ic1 b.1.2.1 (C:130-224) Cytokine receptor common gamma chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor common gamma chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.49 E-value=0.0075 Score=46.00 Aligned_cols=71 Identities=10% Similarity=0.210 Sum_probs=47.4
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
..|..+.|.-.. .+++.|+|...... ....-.|+|....+....... . ..
T Consensus 4 ~~P~nl~v~~~~-~~~v~l~W~~p~~~----------~~~~y~v~y~~~~~~~~~~~~-~------------------~~ 53 (95)
T d2b5ic1 4 WAPENLTLHKLS-ESQLELNWNNRFLN----------HCLEHLVQYRTDWDHSWTEQS-V------------------DY 53 (95)
T ss_dssp CCCEEEEEEEEE-TTEEEEEEECSSCS----------TTCEEEEEEEETTCSSCEEEE-E------------------CS
T ss_pred cCCCCCEEEEEe-CCEEEEEECCCCCc----------eeEEEEEEEEcCCCceeeEee-e------------------cc
Confidence 468999987554 58999999875431 123467888876554332211 0 01
Q ss_pred EEEEEeCCCCCCCEEEEEEec
Q 039280 128 IHHVLITGLQPNTLYEYECGD 148 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~ 148 (487)
....+|.+|+|+|.|.+||..
T Consensus 54 ~~~~~~~~L~p~t~Y~frVRa 74 (95)
T d2b5ic1 54 RHKFSLPSVDGQKRYTFRVRS 74 (95)
T ss_dssp SCEEEECSCCTTSCEEEEEEE
T ss_pred cceeEcCCCCCCCEEEEEEEE
Confidence 236788999999999999964
|
| >d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.43 E-value=0.0089 Score=45.27 Aligned_cols=82 Identities=17% Similarity=0.197 Sum_probs=45.7
Q ss_pred CCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCcE
Q 039280 49 QPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGII 128 (487)
Q Consensus 49 ~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~ 128 (487)
.|..+.+.--. ++++.|+|.......+.. ...=.|+|............ . .. .+..
T Consensus 9 ~P~~~~v~~~s-~tsv~l~W~~P~~~~~~~-------i~gY~i~y~~~~~~~~~~~~---~-~~------------~~~~ 64 (95)
T d2ibga1 9 VPELLEIEEYS-ETAVVLHWSLASDADEHL-------ITGYYAYYRPSSSAGEYFKA---T-IE------------GAHA 64 (95)
T ss_dssp CCEECCCBCCS-SSCEEEEEECCTTCCGGG-------CCEEEEEEEETTCCSCCEEE---E-EE------------CTTC
T ss_pred CCcCeEEEEeC-CCEEEEEEEeeeeccCCc-------ccccceeEeeeeecceeeee---e-cc------------CCce
Confidence 47776665444 689999997543211100 11235777765433221110 0 00 1123
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCc
Q 039280 129 HHVLITGLQPNTLYEYECGDPSISAM 154 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~~~~~~ 154 (487)
...+|+||+|+|.|.+||..-+..+.
T Consensus 65 ~~~~i~~L~p~t~Y~~~V~A~n~~G~ 90 (95)
T d2ibga1 65 RSFKIAPLETATMYEFKLQSFSAASA 90 (95)
T ss_dssp CEEEECSCCTTCEEEEEEEEECSSCB
T ss_pred eEEEEeeccCCeEEEEEEEEEeCCcc
Confidence 46789999999999999975443333
|
| >d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.41 E-value=0.013 Score=43.46 Aligned_cols=71 Identities=11% Similarity=0.107 Sum_probs=44.8
Q ss_pred CCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCcE
Q 039280 49 QPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGII 128 (487)
Q Consensus 49 ~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~ 128 (487)
.|..+++.--. .+++.|+|.-.... ...-.|+|....... .. ... +.-.
T Consensus 2 aP~~l~v~~~t-~~sv~v~W~~p~~~-----------~~~Y~v~~~~~~~~~-~~-----~~~-------------~~~~ 50 (87)
T d1qr4a1 2 NPKDLEVSDPT-ETTLSLRWRRPVAK-----------FDRYRLTYVSPSGKK-NE-----MEI-------------PVDS 50 (87)
T ss_dssp CCEEEEEESCC-SSEEEEEEECCSSC-----------CSEEEEEEECTTCCE-EE-----EEE-------------CTTC
T ss_pred cCcCcEEEEec-CCEEEEEEECCCCC-----------cceeEEEeecCCcce-eE-----EeC-------------CCCc
Confidence 58888887554 68999999764321 123467777654321 11 111 0122
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 039280 129 HHVLITGLQPNTLYEYECGDPS 150 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~~ 150 (487)
..+.|+||+|+|.|.++|..-.
T Consensus 51 ~~~~~~~L~p~t~Y~v~V~a~~ 72 (87)
T d1qr4a1 51 TSFILRGLDAGTEYTISLVAEK 72 (87)
T ss_dssp SEEEEESCCSSCEEEEEEEEES
T ss_pred CEEEECCCCcCCEEEEEEEEEc
Confidence 4678999999999999996543
|
| >d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.38 E-value=0.014 Score=43.66 Aligned_cols=80 Identities=18% Similarity=0.213 Sum_probs=47.8
Q ss_pred CCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCcE
Q 039280 49 QPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGII 128 (487)
Q Consensus 49 ~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~ 128 (487)
.|..+++.-.+ ++++.|+|.-.... ....-.|+|....+...... ... .+-.
T Consensus 3 pP~~l~~~~~~-~~sv~l~W~~p~~~----------~~~~y~v~y~~~~~~~~~~~----~~~-------------~~~~ 54 (91)
T d1fnfa2 3 PPTDLRFTNIG-PDTMRVTWAPPPSI----------DLTNFLVRYSPVKNEEDVAE----LSI-------------SPSD 54 (91)
T ss_dssp CCEEEEEESCC-SSCEEEEEECCTTC----------CCSEEEEEEEETTCTTCCEE----EEE-------------CTTC
T ss_pred cCCceEEEEeC-CCEEEEEEEecCCC----------CcceeEEEEEECCCCccEEE----EEe-------------CCCc
Confidence 37888887544 78999999754310 11234677876554332211 000 1123
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCcCc
Q 039280 129 HHVLITGLQPNTLYEYECGDPSISAMSS 156 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~~~~~~s~ 156 (487)
..++|+||+|+|.|.++|..-...+.|+
T Consensus 55 ~~~~i~~L~p~t~Y~~~V~a~~~~g~S~ 82 (91)
T d1fnfa2 55 NAVVLTNLLPGTEYVVSVSSVYEQHEST 82 (91)
T ss_dssp CEEEECSCCTTCEEEEEEEEEETTEECC
T ss_pred eEEEEeceeCCCEEEEEEEEEcCCCCCC
Confidence 3678999999999999996533234443
|
| >d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.36 E-value=0.0078 Score=46.12 Aligned_cols=35 Identities=17% Similarity=0.325 Sum_probs=27.3
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCcCceEEEEcCC
Q 039280 130 HVLITGLQPNTLYEYECGDPSI---SAMSSSHYFRTMP 164 (487)
Q Consensus 130 ~v~l~gL~P~T~Y~Y~vg~~~~---~~~s~~~~F~T~p 164 (487)
..+|++|+|++.|.+||...+. ..||+...++|+|
T Consensus 59 ~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~T~p 96 (97)
T d2crza1 59 ECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAP 96 (97)
T ss_dssp EEEEESCCTTCEEEECCEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEcCCCCCEEEEEEEEEecCCeEcCCcCCCeEEeCc
Confidence 4678999999999999965433 2567788888875
|
| >d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.35 E-value=0.017 Score=44.09 Aligned_cols=95 Identities=17% Similarity=0.137 Sum_probs=54.6
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
..|..+++.-.. +++|+|+|....+.... + ....=.|.|....+.......-.. ..+.
T Consensus 3 ~~P~~~~~~~~s-~tsi~v~W~~~~~~~~~-----~-~i~~Y~v~y~~~~~~~~~~~~~~~---------------~~~~ 60 (101)
T d1x4ya1 3 AGPYITFTDAVN-ETTIMLKWMYIPASNNN-----T-PIHGFYIYYRPTDSDNDSDYKKDM---------------VEGD 60 (101)
T ss_dssp SCCEEEEEECSS-SSCEEEEEECCCTTSCC-----C-CCCEEEEEECCTTSCSGGGCCCEE---------------EETT
T ss_pred CCCcccEEEEEc-CCEEEEEEecCcccccc-----c-ceEEEEEEeeeccceeeeeeeEEE---------------EcCC
Confidence 458888887665 78999999865432110 0 001223666654332111100000 0112
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC---CCCcCceEEEEcCC
Q 039280 128 IHHVLITGLQPNTLYEYECGDPS---ISAMSSSHYFRTMP 164 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~---~~~~s~~~~F~T~p 164 (487)
....+|++|+|+|.|.+||..-. .+.+|+...++|..
T Consensus 61 ~~~~~i~~L~p~t~Y~~~v~a~n~~G~s~~S~~~~~~T~~ 100 (101)
T d1x4ya1 61 RYWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETKA 100 (101)
T ss_dssp CCEEEECSCCTTCEEEEEEEEECTTCCCCCCCCEEEECCC
T ss_pred eeEEEEcCCCCCCEEEEEEEEEcCCCCCCCCCcEEEEccC
Confidence 33557899999999999995433 23688888898863
|
| >d1tdqa1 b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.34 E-value=0.014 Score=43.92 Aligned_cols=86 Identities=15% Similarity=0.202 Sum_probs=50.6
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
..|..+.+.--+ +++++|+|.-.... ...-.|.|........... +.. ...
T Consensus 5 ~~P~~l~v~~v~-~~si~v~W~~p~~~-----------~~~y~i~~~~~~~~~~~~~------~~~-----------~~~ 55 (93)
T d1tdqa1 5 DGPTQILVRDVS-DTVAFVEWTPPRAK-----------VDFILLKYGLVGGEGGKTT------FRL-----------QPP 55 (93)
T ss_dssp CCCEEEEEEEEC-SSCEEEEEECCSSC-----------CSEEEEEEEESSSSCCCEE------EEE-----------CTT
T ss_pred CcCCCCEEEEeC-CCEEEEEEEccccC-----------CCceEEEEEeccCcceeeE------EEe-----------CCC
Confidence 468888887765 68999999743211 1234677776544322111 000 112
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCcCc--eEEEEc
Q 039280 128 IHHVLITGLQPNTLYEYECGDPSISAMSS--SHYFRT 162 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~~~~~s~--~~~F~T 162 (487)
...++|+||+|+|+|.++|..-...+.|+ ...|+|
T Consensus 56 ~~~~~i~~L~p~t~Y~v~V~a~~~~g~s~~~~~~~tT 92 (93)
T d1tdqa1 56 LSQYSVQALRPGSRYEVSISAVRGTNESDASSTQFTT 92 (93)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEEC
T ss_pred ceEEEEeCcccceEEEEEEEEEeCCCCcCCEEEEEEC
Confidence 23578999999999999996533223332 334554
|
| >d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.34 E-value=0.014 Score=43.51 Aligned_cols=73 Identities=16% Similarity=0.114 Sum_probs=44.3
Q ss_pred CCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCcE
Q 039280 49 QPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGII 128 (487)
Q Consensus 49 ~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~ 128 (487)
.|..+.++--. ++++.|+|.-.... ...-.++|............ .. ..-.
T Consensus 2 pP~~l~~~~v~-~~si~l~W~~p~~~-----------~~~~~i~~~~~~~~~~~~~~----~~-------------~~~~ 52 (90)
T d1fnha1 2 APTDLKFTQVT-PTSLSAQWTPPNVQ-----------LTGYRVRVTPKEKTGPMKEI----NL-------------APDS 52 (90)
T ss_dssp CCEEEEEEEEC-SSCEEEEEECCSSC-----------CSEEEEEEEESSSCSCCCEE----EE-------------CTTC
T ss_pred CCCCEEEEEec-CCEEEEEEEcccee-----------ccceEEEEEeeeCCCceEEE----Ee-------------CCCC
Confidence 37888876655 78999999764321 12345677654332211110 00 0012
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 039280 129 HHVLITGLQPNTLYEYECGDPS 150 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~~ 150 (487)
-+.+|+||+|+|.|++||..-.
T Consensus 53 ~~~~i~~L~p~t~Y~~~V~a~n 74 (90)
T d1fnha1 53 SSVVVSGLMVATKYEVSVYALK 74 (90)
T ss_dssp CEEEECSCCTTCEEEEEEEEEE
T ss_pred eEEEEecccCceEEEEEEEEEe
Confidence 3578999999999999996543
|
| >d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.34 E-value=0.014 Score=43.96 Aligned_cols=85 Identities=15% Similarity=0.174 Sum_probs=50.8
Q ss_pred CCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCcE
Q 039280 49 QPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGII 128 (487)
Q Consensus 49 ~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~ 128 (487)
.|..+.+.--. ++++.|+|.-.... ...-.|.|....+.. .. ... . ...
T Consensus 4 ~P~~l~~~~~~-~~sv~l~W~~p~~~-----------~~~Y~v~~~~~~~~~-~~-----~~~------~-------~~~ 52 (93)
T d2cuma1 4 APRDLEAKEVT-PRTALLTWTEPPVR-----------PAGYLLSFHTPGGQT-QE-----ILL------P-------GGI 52 (93)
T ss_dssp CCEEEEEESCC-SSCEEEEEECCSSC-----------CSEEEEEEECTTSCE-EE-----EEE------C-------SSC
T ss_pred cCCCCEEEEeC-CCEEEEEEEccccc-----------cccEEEEEEcccccc-EE-----EEE------C-------CCc
Confidence 47777776433 68999999764321 124567787654321 11 111 0 122
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCcCc--eEEEEcCC
Q 039280 129 HHVLITGLQPNTLYEYECGDPSISAMSS--SHYFRTMP 164 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~~~~~~s~--~~~F~T~p 164 (487)
..++|+||+|+|.|.++|..-...+.|+ ...|+|..
T Consensus 53 ~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~tT~g 90 (93)
T d2cuma1 53 TSHQLLGLFPSTSYNARLQAMWGQSLLPPVSTSFTTGG 90 (93)
T ss_dssp SEEEECSCCTTCEEEEEEEEEBTTBCCCCEEEEEECCC
T ss_pred cEEEEeCccCCCEEEEEEEEEeCCCCCCCEEEEEEeCC
Confidence 3578999999999999996544334443 34677643
|
| >d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.34 E-value=0.01 Score=45.81 Aligned_cols=95 Identities=15% Similarity=0.160 Sum_probs=52.6
Q ss_pred CCCCCCCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCC
Q 039280 42 NAQGEGFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQ 121 (487)
Q Consensus 42 ~~~~~~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~ 121 (487)
...+.+..|..+.+.-.. .+++.|+|.-.... +. + ...-.|+|............ +.
T Consensus 6 T~~~~P~~P~~~~~~~~~-~~sv~l~W~pp~~~-~~------~-i~~Y~i~~~~~~~~~~~~~~-----~~--------- 62 (105)
T d1x3da1 6 TLSCEPDIPNPPRIANRT-KNSLTLQWKAPSDN-GS------K-IQNFVLEWDEGKGNGEFCQC-----YM--------- 62 (105)
T ss_dssp CCCSCCCCCCCCEEEEEE-TTEEEEECCCCCCC-SS------C-EEEEEEEECTTTSSSCCEEE-----EE---------
T ss_pred CCCCCCcCCCCCEEEEcc-CCEEEEEEECCCCC-cC------c-cEEEEEEEecCCCcceeEEE-----ec---------
Confidence 333345568888887544 68999999754321 10 0 01123334333222211111 10
Q ss_pred ccccCcEEEEEeCCCCCCCEEEEEEecCC---CCCcCceEEEEcC
Q 039280 122 NYTSGIIHHVLITGLQPNTLYEYECGDPS---ISAMSSSHYFRTM 163 (487)
Q Consensus 122 ~~~~~~~h~v~l~gL~P~T~Y~Y~vg~~~---~~~~s~~~~F~T~ 163 (487)
+.-....|.+|+|+|.|.+||...+ .+.||+...|+|.
T Consensus 63 ----~~~~~~~~~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~T~ 103 (105)
T d1x3da1 63 ----GSQKQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTS 103 (105)
T ss_dssp ----ESCSEEEEESCCTTCEEEEECCEEESSCBCCCCCCEEEECS
T ss_pred ----CCccEEEecCCcCCcEEEEEEEEECCCeEcCCCCcEEEECC
Confidence 0112567789999999999995322 2357788888874
|
| >d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.34 E-value=0.0031 Score=48.43 Aligned_cols=95 Identities=17% Similarity=0.102 Sum_probs=51.0
Q ss_pred CCCCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEE--EEEEEeeeecCCCCCCc
Q 039280 45 GEGFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAE--GYSLVYNQLYPPDGLQN 122 (487)
Q Consensus 45 ~~~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~--g~~~~~~~~~~~~g~~~ 122 (487)
|.+-.|++++++--. +++++|+|..... ....-.|+|............ .......
T Consensus 2 g~Pp~~~~l~v~~~t-~~sv~v~W~pp~~-----------~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~---------- 59 (101)
T d2cuia1 2 GSRPRLSQLSVTDVT-TSSLRLNWEAPPG-----------AFDSFLLRFGVPSPSTLEPHPRPLLQRELM---------- 59 (101)
T ss_dssp CCCCCCCCCEEESCC-SSCEEEECCCCTT-----------SCSEEEEEEECCCCSSSCCCSSCCCCEEEE----------
T ss_pred CCccCCCCcEEEEEC-CCEEEEEEEeccc-----------cccceEEEEEecCCCceeeccCCcceeEee----------
Confidence 344567888887654 6899999954321 112456677664322111100 0000000
Q ss_pred cccCcEEEEEeCCCCCCCEEEEEEecCCCCCcCc--eEEEEc
Q 039280 123 YTSGIIHHVLITGLQPNTLYEYECGDPSISAMSS--SHYFRT 162 (487)
Q Consensus 123 ~~~~~~h~v~l~gL~P~T~Y~Y~vg~~~~~~~s~--~~~F~T 162 (487)
..+......|++|+|+|.|.++|..-...+.++ .-.++|
T Consensus 60 -~~~~~~~~~v~~L~p~t~Y~~~V~a~~~~g~g~~~~~~~~T 100 (101)
T d2cuia1 60 -VPGTRHSAVLRDLRSGTLYSLTLYGLRGPHKADSIQGTART 100 (101)
T ss_dssp -EETTCCEEEECSCCTTCEEEEEEEEECSSSEEEEEEEEEEC
T ss_pred -cccceeEEEeCCCCcCCEEEEEEEEEeCCcEeCCeEEEeEE
Confidence 012234667899999999999996544333332 334444
|
| >d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.28 E-value=0.011 Score=44.05 Aligned_cols=73 Identities=16% Similarity=0.099 Sum_probs=45.9
Q ss_pred CCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCcE
Q 039280 49 QPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGII 128 (487)
Q Consensus 49 ~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~ 128 (487)
.|.+++++--+ ++++.|+|.-.... ...-.|+|............ .. ++-.
T Consensus 3 ~P~~l~v~~vt-~~sv~l~W~~p~~~-----------~~~Y~i~~~~~~~~~~~~~~----~v-------------~~~~ 53 (89)
T d1fnfa3 3 SPTGIDFSDIT-ANSFTVHWIAPRAT-----------ITGYRIRHHPEHFSGRPRED----RV-------------PHSR 53 (89)
T ss_dssp CCEEEEEESCC-SSEEEEEEECCSSC-----------CSEEEEEEECSCCSSCCEEE----EE-------------ETTC
T ss_pred cCcCCEEEEec-CCEEEEEEEeCCCE-----------EeeEEEEEEECCCCCceEEE----EE-------------CCCc
Confidence 48888877544 78999999764321 12345788766543322110 00 1123
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 039280 129 HHVLITGLQPNTLYEYECGDPS 150 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~~ 150 (487)
.++.|++|+|+|.|.++|..-.
T Consensus 54 ~~~~i~~L~p~t~Y~~~V~a~~ 75 (89)
T d1fnfa3 54 NSITLTNLTPGTEYVVSIVALN 75 (89)
T ss_dssp CEEEEESCCTTCEEEEEEEEEE
T ss_pred cEEEECCCcccCEEEEEEEEEc
Confidence 4678999999999999996543
|
| >d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.27 E-value=0.0068 Score=46.76 Aligned_cols=87 Identities=15% Similarity=0.146 Sum_probs=50.8
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
..|..+.+.-.. ++++.|+|......-| + ...=.|+|...+......... -
T Consensus 12 ~~P~~l~v~~~s-~~si~l~W~~P~~~~g-------~-i~~Y~v~~~~~~~~~~~~~~~--------------------~ 62 (103)
T d1x5ga1 12 GPAPNLRAYAAS-PTSITVTWETPVSGNG-------E-IQNYKLYYMEKGTDKEQDVDV--------------------S 62 (103)
T ss_dssp CCCSSCEEEEEE-TTEEEEECCCCSCCSS-------C-CSEEEEEEEETTCCCCCCEEE--------------------C
T ss_pred ccCCCcEEEEcc-CCEEEEEEECCcCCCc-------c-EEEEEEEEEeCCCceeEEEec--------------------c
Confidence 457777776544 6899999975432101 0 112345666554332211110 1
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCcCceEEEEcC
Q 039280 128 IHHVLITGLQPNTLYEYECGDPSI---SAMSSSHYFRTM 163 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~~---~~~s~~~~F~T~ 163 (487)
...+.|+||+|+|.|.++|..-+. +.+|+...++|+
T Consensus 63 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~v~T~ 101 (103)
T d1x5ga1 63 SHSYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTL 101 (103)
T ss_dssp SSEEEECSCCTTCEEEEEEEEECSSCCCCBCCCCCEECC
T ss_pred ccEEecCCCCCCCEEEEEEEEEcCCcCcCCCCCEEEEcC
Confidence 125678999999999999954322 246667777775
|
| >d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.26 E-value=0.0055 Score=45.83 Aligned_cols=79 Identities=18% Similarity=0.160 Sum_probs=47.6
Q ss_pred CCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCcE
Q 039280 49 QPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGII 128 (487)
Q Consensus 49 ~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~ 128 (487)
.|..+++.--+ .+++.|+|.-.... ...=.|+|....+.... .. .. ...-.
T Consensus 3 aP~nl~v~~~~-~~s~~l~W~~p~~~-----------i~~Y~i~~~~~~~~~~~--------~~--~~-------~~~~~ 53 (89)
T d1fnha3 3 APSNLRFLATT-PNSLLVSWQPPRAR-----------ITGYIIKYEKPGSPPRE--------VV--PR-------PRPGV 53 (89)
T ss_dssp CCEEEEEEEEE-TTEEEEEEECCSSC-----------CSEEEEEEECTTSCCEE--------CT--TC-------CCTTC
T ss_pred cCcCCEEEEec-CCEEEEEEeCCCcC-----------CceEEEEEeeccCCccE--------EE--EE-------cCCCc
Confidence 48888887655 68999999754321 12346677765432110 00 00 01123
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCcCc
Q 039280 129 HHVLITGLQPNTLYEYECGDPSISAMSS 156 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~~~~~~s~ 156 (487)
..++|++|+|+|.|.++|..-...+.|+
T Consensus 54 ~~~~~~~L~p~t~Y~~~V~a~n~~g~S~ 81 (89)
T d1fnha3 54 TEATITGLEPGTEYTIYVIALKNNQKSE 81 (89)
T ss_dssp CEEEEESCCTTCEEEEEEEEESSSCEEE
T ss_pred cEEEEEeeeCCCEEEEEEEEEcCCCEeC
Confidence 4678999999999999997544334443
|
| >d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma pneumoniae [TaxId: 2104]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Hypothetical protein MPN349 species: Mycoplasma pneumoniae [TaxId: 2104]
Probab=96.21 E-value=0.094 Score=47.65 Aligned_cols=184 Identities=14% Similarity=0.148 Sum_probs=101.3
Q ss_pred CcEEEEEecCCCCCChH---HHHHHHH-HcCCCEEEEcCccccccccccCCCccccccccCCCCcccchhhHHHHHHHHh
Q 039280 172 PNRIAVVGDLGLTYNTT---TTVAHLM-SNHPDLLLLIGDLSYADLYLTNGTKSSCYLCQSIESPIQETYQPRWDYWGRY 247 (487)
Q Consensus 172 ~~~f~v~gD~~~~~~~~---~~l~~l~-~~~pdfvl~~GDl~y~d~~~~~g~~~~~~~~~~~~~~~~~~y~~~w~~~~~~ 247 (487)
.+||+++||+=...... +.|.++. +.++||||..|-.+-. |..- . +...+++++.
T Consensus 4 ~MkILfiGDIvG~~GR~~v~~~Lp~Lr~~~~iDfVIaNgENaa~------G~Gi-----------t----~k~~~eL~~~ 62 (281)
T d1t71a_ 4 SIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTH------GKGL-----------S----LKHYEFLKEA 62 (281)
T ss_dssp CCEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTT------TSSC-----------C----HHHHHHHHHH
T ss_pred cceEEEEEccCCHHHHHHHHHHhHHHHHHhCCCEEEECCccCCC------CcCC-----------C----HHHHHHHHHh
Confidence 68999999984432222 2244444 3589999999999842 3211 0 1222333222
Q ss_pred hhccccCCCEEEecCCcccccCccchhhHHhhc---ccCCCCCC----C-CCCCcceEEEEeCCEEEEEEcCc--ccCC-
Q 039280 248 MQPLVSNVPTMVIEGEHEIERQAENQTFAAYSS---RFAFPSEE----S-GSSSSLYYSFNAGGIHFVMLSAY--IDYD- 316 (487)
Q Consensus 248 ~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~y~~---~f~~P~~~----~-~~~~~~yYsf~~g~v~fi~Ldt~--~~~~- 316 (487)
.+- +.+.|||=+.. +....|.. +.-.|.|- + ...+..|..++.++..+.+++-. ....
T Consensus 63 ------GvD-vIT~GNH~wd~----kei~~~i~~~~~llRP~N~p~~~p~~~pG~G~~i~~~~~~~i~Vinl~G~~fm~~ 131 (281)
T d1t71a_ 63 ------GVN-YITMGNHTWFQ----KLDLAVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLP 131 (281)
T ss_dssp ------TCC-EEECCTTTTCC----GGGHHHHTTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCS
T ss_pred ------CCc-EEEcCchhhhc----hhhHHHHhhcccccccccccccccCCCCCceEEEEEccccceeeeeecccccccc
Confidence 232 56889998753 22223322 22233331 1 23456688888887666666642 1111
Q ss_pred -CChHHHHHHHHHhcccCCCCCCeEEEEcCCCccccCCCCcchhHHHHHHHHHHHHHcCCcEEEeCccccceecccccCC
Q 039280 317 -KSSDQYKWLESDLGDVDREVTPWLIAAWHPPWYSTYSAHYREVECMRVEMEDLLYYYGVDIVFNGHVHAYERSNRVYNY 395 (487)
Q Consensus 317 -~~~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~VdlvlsGH~H~yeR~~p~~~~ 395 (487)
.......-+++.+.+ ..++.+||=+|.=. .....+| -.+-+-+|.+|+-=|+|.-. .+.
T Consensus 132 ~~~~~pf~~~~~~~~~---~~~d~i~VDfHaEA-----------TSEK~A~-g~~lDGrvsaVvGTHTHV~T-----aD~ 191 (281)
T d1t71a_ 132 FKTTNPFKVLKELILK---RDCDLHIVDFHAET-----------TSEKNAF-CMAFDGYVTTIFGTHTHVPS-----ADL 191 (281)
T ss_dssp SCBCCHHHHHHHHHTT---CCCSEEEEEEECSC-----------HHHHHHH-HHHHTTTSSEEEEESSSSCC-----TTC
T ss_pred ccccHHHHHHHHhhcc---cCCCeEEEEeccch-----------hhhhhhh-eeeeCCcEEEEEecCccccc-----Ccc
Confidence 122333445555544 35667888888422 1112233 34455689999999999632 222
Q ss_pred ccCCCCcEEEEe
Q 039280 396 SLDPCGPVYILV 407 (487)
Q Consensus 396 ~~~~~g~vyIv~ 407 (487)
.+=|+|+-|++-
T Consensus 192 rILp~GTAyiTD 203 (281)
T d1t71a_ 192 RITPKGSAYITD 203 (281)
T ss_dssp EECTTSCEEESC
T ss_pred ccccCCeEEEec
Confidence 334689999863
|
| >d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.20 E-value=0.012 Score=45.84 Aligned_cols=83 Identities=17% Similarity=0.218 Sum_probs=44.2
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
..|..+.+.-. +.+++.|+|.-.. .-|.. ...=.|+|............... . ...
T Consensus 12 ~~P~~~~v~~~-~~~sv~l~W~p~~-~~g~~-------I~~Y~v~~~~~~~~~~~~~~~~~--~-------------~~~ 67 (108)
T d1x4za1 12 EAPDRPTISTA-SETSVYVTWIPRG-NGGFP-------IQSFRVEYKKLKKVGDWILATSA--I-------------PPS 67 (108)
T ss_dssp CCCCCCEEEEC-CSSEEEEECCCCC-CTTSC-------CCEEEEEEEESSSCCCCEEEEEE--E-------------CTT
T ss_pred ccCCCCEEEEc-cCCEEEEEEECCC-CCCCc-------cEEEEEEEEecCCCCceEEEEEe--e-------------cCC
Confidence 45777766543 3689999994221 11110 12345667654432222111110 0 112
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCc
Q 039280 128 IHHVLITGLQPNTLYEYECGDPSISAM 154 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~~~~~ 154 (487)
....+|++|+|+|.|.+||...+..++
T Consensus 68 ~~~~~v~~L~p~t~Y~frV~A~N~~G~ 94 (108)
T d1x4za1 68 RLSVEITGLEKGISYKFRVRALNMLGE 94 (108)
T ss_dssp CCEEEEESCCTTCEEEEEEEEEETTEE
T ss_pred ccEEEECCCCCCCEEEEEEEEECCCcC
Confidence 235678999999999999965443333
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Probab=96.14 E-value=0.0013 Score=58.50 Aligned_cols=37 Identities=38% Similarity=0.495 Sum_probs=26.1
Q ss_pred EEEEEecCCCCCCh-HHHHHHHHH-cCCCEEEEcCcccc
Q 039280 174 RIAVVGDLGLTYNT-TTTVAHLMS-NHPDLLLLIGDLSY 210 (487)
Q Consensus 174 ~f~v~gD~~~~~~~-~~~l~~l~~-~~pdfvl~~GDl~y 210 (487)
|++++||+|..... .++++++.. ...|-++++||++.
T Consensus 14 rI~vIgDIHG~~~~L~~lL~~i~~~~~~d~lv~lGD~vD 52 (219)
T d1g5ba_ 14 NIWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVD 52 (219)
T ss_dssp CEEEECCCTTCHHHHHHHHHHHTCCTTTCEEEECSCCSS
T ss_pred eEEEEEecccCHHHHHHHHHHcCCCCCCCEEEEeCCccc
Confidence 78999999976432 334444432 35689999999995
|
| >d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.01 E-value=0.014 Score=43.36 Aligned_cols=70 Identities=14% Similarity=0.173 Sum_probs=45.1
Q ss_pred CCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCcE
Q 039280 49 QPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGII 128 (487)
Q Consensus 49 ~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~ 128 (487)
.|..++++--. ++++.|+|.-.... ...-.|+|........ ... .. + -.
T Consensus 3 ~P~nl~v~~~~-~~s~~l~W~~p~~~-----------~~~Y~v~~~~~~~~~~-~~~-----~~------~-------~~ 51 (86)
T d1tdqa3 3 SPRDLMVTASS-ETSISLIWTKASGP-----------IDHYRITFTPSSGISS-EVT-----VP------R-------DR 51 (86)
T ss_dssp CCEEEEEEEEC-SSCEEEEEECCCSC-----------CSEEEEEEECSSSCCE-EEE-----EE------S-------SC
T ss_pred cCCCCEEEEec-CCEEEEEEeCCCCC-----------ccceEEEEecccccce-EEE-----eC------C-------Cc
Confidence 48888887654 78999999765321 1245678876543221 110 00 1 12
Q ss_pred EEEEeCCCCCCCEEEEEEecC
Q 039280 129 HHVLITGLQPNTLYEYECGDP 149 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~ 149 (487)
-+++|+||+|+|.|.++|..-
T Consensus 52 ~~~~~~~L~p~t~Y~v~V~a~ 72 (86)
T d1tdqa3 52 TSYTLTDLEPGAEYIISITAE 72 (86)
T ss_dssp SEEEECCCCTTCCEEEEEEEE
T ss_pred cEEEECCCccccEEEEEEEEE
Confidence 367899999999999999654
|
| >d3d48r2 b.1.2.1 (R:101-204) Prolactin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.96 E-value=0.056 Score=40.95 Aligned_cols=89 Identities=16% Similarity=0.142 Sum_probs=48.0
Q ss_pred CCCceEEEeecc---CCCcEEEEEEcCCCCCCCCCCCCCCCCCccEE----EEeccCCCCceEEEEEEEEeeeecCCCCC
Q 039280 48 FQPEQIFVSLSA---RYDSVWISWITGEFQIGDNISPLDPELVQSIV----YFRVFRSSLTYQAEGYSLVYNQLYPPDGL 120 (487)
Q Consensus 48 ~~P~qi~l~~~~---~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V----~yg~~~~~~~~~~~g~~~~~~~~~~~~g~ 120 (487)
..|..+.+.+.. ..+++.|+|........ ......+ +|....+.......
T Consensus 4 ~pP~~l~~~~~~~~~~~~~l~v~W~pP~~~~~--------~~~~~~~~Y~~~~~~~~~~~~~~~~--------------- 60 (104)
T d3d48r2 4 DPPLELAVEVKQPEDRKPYLWIKWSPPTLIDL--------KTGWFTLLYEIRLKPEKAAEWEIHF--------------- 60 (104)
T ss_dssp CCCEEEEEECC------CCEEEEEECCTTCCC--------TTSSCCEEEEEEEEETTCSSCEEEE---------------
T ss_pred cCCCCCEEEEEeccCCCCeEEEEEeCCccccC--------CCCcEEEEEeeccccccccceeeec---------------
Confidence 458888887643 34689999987542110 0011233 44443332222110
Q ss_pred CccccCcEEEEEeCCCCCCCEEEEEEecCC---C-CCcCceEEEEcC
Q 039280 121 QNYTSGIIHHVLITGLQPNTLYEYECGDPS---I-SAMSSSHYFRTM 163 (487)
Q Consensus 121 ~~~~~~~~h~v~l~gL~P~T~Y~Y~vg~~~---~-~~~s~~~~F~T~ 163 (487)
......++|.+|+|+|.|.+||.... . +.||+...++|+
T Consensus 61 ----~~~~~~~~i~~L~p~t~Y~~rVrA~n~~G~ws~wS~~~~v~tP 103 (104)
T d3d48r2 61 ----AGQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIP 103 (104)
T ss_dssp ----EETCSEEEECC--CCCEEEEEEEEEESSSCCCCCCCCEEEECC
T ss_pred ----cccccEEEECCCCCCCEEEEEEEEEeCCCCCCCCcCCEEEECc
Confidence 01123577899999999999995422 1 257778888774
|
| >d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-4 receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.95 E-value=0.027 Score=42.74 Aligned_cols=80 Identities=9% Similarity=0.044 Sum_probs=39.8
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
..|..|.+.-.. .+++.|+|.......+... ....-.|+|....+....... + . . ....
T Consensus 3 ~~P~~l~v~~~~-~~s~~v~W~~P~~~~~~~~-----~~~~y~v~y~~~~~~~~~~~~-~-~------~-------~~~~ 61 (101)
T d1iarb2 3 RAPGNLTVHTNV-SDTLLLTWSNPYPPDNYLY-----NHLTYAVNIWSENDPADFRIY-N-V------T-------YLEP 61 (101)
T ss_dssp CCCEEEEEC-----CCEEEEEECSSCTTSTTG-----GGCEEEEEEEESSSCSCEEEE-E-E------C-------SSCC
T ss_pred ccCCcCEEEEEe-CCeEEEEEccccCCCCccc-----eeeEEEEeeecccceeeeeee-e-e------c-------cCcc
Confidence 468888886655 5799999987643211000 001135677665544332211 0 0 0 0123
Q ss_pred EEEEEeCCCCCCCEEEEEEec
Q 039280 128 IHHVLITGLQPNTLYEYECGD 148 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~ 148 (487)
...+.|.+|+|+|.|.+||..
T Consensus 62 ~~~~~i~~L~p~t~Y~~rVrA 82 (101)
T d1iarb2 62 SLRIAASTLKSGISYRARVRA 82 (101)
T ss_dssp EEEECC-----CCCEEEEEEE
T ss_pred ceEEEECCCCCCCEEEEEEEE
Confidence 456789999999999999964
|
| >d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=95.94 E-value=0.014 Score=44.49 Aligned_cols=79 Identities=11% Similarity=0.141 Sum_probs=45.8
Q ss_pred CCCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCcccc
Q 039280 46 EGFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTS 125 (487)
Q Consensus 46 ~~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~ 125 (487)
.+..|..+.+..+ .+++.|+|.-.... +. + ...=.|+|................ .
T Consensus 5 vP~~P~~~~v~~~--~~sv~lsW~pp~~~-~~------~-i~~Y~v~~~~~~~~~~~~~~~~~~--~------------- 59 (100)
T d1cfba1 5 VPNAPKLTGITCQ--ADKAEIHWEQQGDN-RS------P-ILHYTIQFNTSFTPASWDAAYEKV--P------------- 59 (100)
T ss_dssp CCCCCEEEEEEEC--SSEEEEEEECCCCT-TS------C-CCEEEEEEEESSSTTCCEEEEEEE--E-------------
T ss_pred CCCcCcCcEEEEc--CCEEEEEEcCCccc-cc------c-eEEEEEEEecCCCCceeeEEeeec--C-------------
Confidence 3457888888754 36899999754321 11 0 123467777655433322211110 0
Q ss_pred CcEEEEEeCCCCCCCEEEEEEecCC
Q 039280 126 GIIHHVLITGLQPNTLYEYECGDPS 150 (487)
Q Consensus 126 ~~~h~v~l~gL~P~T~Y~Y~vg~~~ 150 (487)
-.....+++|+|+|.|.+||...+
T Consensus 60 -~~~~~~~~~L~p~t~Y~frV~A~n 83 (100)
T d1cfba1 60 -NTDSSFVVQMSPWANYTFRVIAFN 83 (100)
T ss_dssp -TTCSEEEEECCSSEEEEEEEEEEE
T ss_pred -CceEEEEecCCCCCEEEEEEEEEe
Confidence 012345779999999999996544
|
| >d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.92 E-value=0.014 Score=43.84 Aligned_cols=85 Identities=18% Similarity=0.193 Sum_probs=49.5
Q ss_pred CCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCcE
Q 039280 49 QPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGII 128 (487)
Q Consensus 49 ~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~ 128 (487)
.|.++.+.--. .+++.|+|.-.... ...-.++|....+... .. .. .. ....
T Consensus 4 ~P~~l~v~~vt-~~sv~l~W~~p~~~-----------~~~y~i~~~~~~~~~~-------~~-~~--~~-------~~~~ 54 (94)
T d1j8ka_ 4 RPKGLAFTDVD-VDSIKIAWESPQGQ-----------VSRYRVTYSSPEDGIH-------EL-FP--AP-------DGEE 54 (94)
T ss_dssp CCCCCEEEEEE-TTEEEEECCCCSSC-----------CSCEEEEEEETTTEEE-------EE-CC--CC-------CSSC
T ss_pred CCCCCEEEEec-CCEEEEEEeCCCcc-----------ccceEEEEEeecCCCc-------eE-EE--ec-------CCCc
Confidence 57888776444 57999999643211 1234667766543111 00 00 00 1123
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCcCce--EEEEc
Q 039280 129 HHVLITGLQPNTLYEYECGDPSISAMSSS--HYFRT 162 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~~~~~~s~~--~~F~T 162 (487)
...+|+||+|+|.|.++|..-...+.|.. ..++|
T Consensus 55 ~~~~i~~L~p~t~Y~~~V~a~~~~g~S~p~~~~~~T 90 (94)
T d1j8ka_ 55 DTAELQGLRPGSEYTVSVVALHDDMESQPLIGTQST 90 (94)
T ss_dssp CEEEECSCCCCSEEEEEEEECSSSCCCCCEEEEEEC
T ss_pred cEEEECCCCCCCEEEEEEEEEeCCCCcCCEEEEEEE
Confidence 46788999999999999976554455543 34555
|
| >d2crma1 b.1.2.1 (A:8-114) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.88 E-value=0.0069 Score=47.02 Aligned_cols=34 Identities=29% Similarity=0.220 Sum_probs=24.4
Q ss_pred EEEeCCCCCCCEEEEEEecCCC---CCcCceEEEEcC
Q 039280 130 HVLITGLQPNTLYEYECGDPSI---SAMSSSHYFRTM 163 (487)
Q Consensus 130 ~v~l~gL~P~T~Y~Y~vg~~~~---~~~s~~~~F~T~ 163 (487)
...|+||+|+|+|.+||...+. +.+|+...|+|+
T Consensus 69 ~~~i~~L~p~t~Y~~rV~A~n~~G~s~~S~~v~v~Tp 105 (107)
T d2crma1 69 EHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTP 105 (107)
T ss_dssp EEEECSCCTTSCEEEEEEEEETTEECCCCCCCCCCCC
T ss_pred EEEEeccCCCCEEEEEEEEECCCcCcCCCCcEEEECC
Confidence 4578999999999999965332 246666666663
|
| >d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.87 E-value=0.021 Score=44.89 Aligned_cols=97 Identities=14% Similarity=0.158 Sum_probs=52.8
Q ss_pred cCCCCCCCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCC
Q 039280 41 NNAQGEGFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGL 120 (487)
Q Consensus 41 ~~~~~~~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~ 120 (487)
+...+.+..|..+.+.-.+ ++++.|+|.-....-| ....=.|+|............ ...
T Consensus 15 ~T~~~~P~~P~~~~~~~~~-~~sv~v~W~~P~~~~g--------~i~~Y~i~y~~~~~~~~~~~~---~~~--------- 73 (117)
T d1wfoa1 15 RTLDDVPGPPMGILFPEVR-TTSVRLIWQPPAAPNG--------IILAYQITHRLNTTTANTATV---EVL--------- 73 (117)
T ss_dssp CCSCCCCCCCCCCEEEEEC-SSEEEEECCCCSCCCS--------CCCEEEEEEEESSCCCSCCCE---EEE---------
T ss_pred ECCCCCCcCCCCcEEEEec-CCEEEEEEECCCCCCC--------ceEEEeeeeeeccCCCceEeE---Eec---------
Confidence 3444445678888776544 7899999964332111 011234666554432211100 000
Q ss_pred CccccCcEEEEEeCCCCCCCEEEEEEecCCCC---CcCceEEEEc
Q 039280 121 QNYTSGIIHHVLITGLQPNTLYEYECGDPSIS---AMSSSHYFRT 162 (487)
Q Consensus 121 ~~~~~~~~h~v~l~gL~P~T~Y~Y~vg~~~~~---~~s~~~~F~T 162 (487)
........|++|+|+|.|.+||..-+.. .+|+...++|
T Consensus 74 ----~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~tT 114 (117)
T d1wfoa1 74 ----APSARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTT 114 (117)
T ss_dssp ----CTTCCEEEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECC
T ss_pred ----CCceEEEEECCCCCCCEEEEEEEEECCCcCCCCcCCEEEEC
Confidence 0112356789999999999999654433 3444555554
|
| >d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.85 E-value=0.027 Score=41.99 Aligned_cols=77 Identities=23% Similarity=0.141 Sum_probs=46.3
Q ss_pred CCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCcE
Q 039280 49 QPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGII 128 (487)
Q Consensus 49 ~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~ 128 (487)
.|.++++.-.. .++|.|+|.-.... ...=.|+|....+...... .. ..-.
T Consensus 4 pP~~l~v~~~~-~~si~v~W~~p~~~-----------~~~Y~i~~~~~~~~~~~~~-----~~-------------~~~~ 53 (90)
T d1fnha2 4 PPRRARVTDAT-ETTITISWRTKTET-----------ITGFQVDAVPANGQTPIQR-----TI-------------KPDV 53 (90)
T ss_dssp CCEEEEEEEEC-SSEEEEEEECCSSC-----------CCCEEEEEEESSSSCCEEE-----EC-------------CTTC
T ss_pred cCCCCEEEEec-CCEEEEEEECCCCC-----------CceeEEEEEEccCCceEEE-----ec-------------CCCc
Confidence 48888887544 68999999743311 1234667766543222111 00 0112
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCcC
Q 039280 129 HHVLITGLQPNTLYEYECGDPSISAMS 155 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~~~~~~s 155 (487)
....|++|+|||.|.++|..-...+.|
T Consensus 54 ~~~~i~~L~p~t~Y~~~V~a~~~~g~s 80 (90)
T d1fnha2 54 RSYTITGLQPGTDYKIYLYTLNDNARS 80 (90)
T ss_dssp SEEEEESCCTTCEEEEEEEEEETTEEC
T ss_pred cEEEeCCCCCCcEEEEEEEEEeCCCCc
Confidence 366889999999999999654433443
|
| >d1f6fb2 b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.80 E-value=0.059 Score=40.97 Aligned_cols=92 Identities=10% Similarity=0.056 Sum_probs=49.5
Q ss_pred CCCceEEEeec---cCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccc
Q 039280 48 FQPEQIFVSLS---ARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYT 124 (487)
Q Consensus 48 ~~P~qi~l~~~---~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~ 124 (487)
..|..+.+.+. ..++++.|+|.......... +--...=.|+|.............
T Consensus 4 ~pP~nl~~~~~~~~~~~~~v~vsW~pP~~~~~~~----~~~~l~Y~v~~~~~~~~~~~~~~~------------------ 61 (103)
T d1f6fb2 4 EPPRNLTLEVKQLKDKKTYLWVKWSPPTITDVKT----GWFTMEYEIRLKPEEAEEWEIHFT------------------ 61 (103)
T ss_dssp CCCEEEEEEEC----CCCCEEEEEECCTTSCTTT----TSSCEEEEEEEEESSCSCCEEEEE------------------
T ss_pred CCCCCCEEEEEecccCCCEEEEEECCCCcccCCC----CcEEEEEEEEEEeCCCcceeeecc------------------
Confidence 45887777543 34578999998754210000 000011244555554433322210
Q ss_pred cCcEEEEEeCCCCCCCEEEEEEecCCC----CCcCceEEEEc
Q 039280 125 SGIIHHVLITGLQPNTLYEYECGDPSI----SAMSSSHYFRT 162 (487)
Q Consensus 125 ~~~~h~v~l~gL~P~T~Y~Y~vg~~~~----~~~s~~~~F~T 162 (487)
..-....|.||+|+|.|.+||..... ..||+.-.++|
T Consensus 62 -~~~~~~~i~~L~p~t~Y~~rVra~~~~G~wS~wS~~~~~~~ 102 (103)
T d1f6fb2 62 -GHQTQFKVFDLYPGQKYLVQTRCKPDHGYWSRWSQESSVEM 102 (103)
T ss_dssp -ETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEEC
T ss_pred -cceeEEEeCCCCcceEEEEEEEEEeCCCCCCCCcCceeeEC
Confidence 01135788999999999999954322 24666655554
|
| >d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.77 E-value=0.026 Score=44.49 Aligned_cols=95 Identities=20% Similarity=0.230 Sum_probs=53.6
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
..|..|.+...+ ++++.|+|....... . ...+..|...= ............. ..+.
T Consensus 13 ~~P~~v~~~~~~-~~si~v~W~~p~~~~--------~--ng~i~~Y~v~y----~~~~~~~~~~~~~---------~~~~ 68 (119)
T d1x5ha1 13 AAPQNLSLEVRN-SKSIMIHWQPPAPAT--------Q--NGQITGYKIRY----RKASRKSDVTETL---------VSGT 68 (119)
T ss_dssp CCCEEEEEECCS-SSEEEEEEECCCTTT--------C--CSCEEEEBCEE----EETTEEEEEECCB---------CCTT
T ss_pred CCCcCeEEEEec-CcEEEEEEEcccccC--------C--CCCEEEEEEEE----eecccccceeeee---------cCCC
Confidence 358889887665 689999997643210 0 11333444320 0000011101000 1122
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCcCceEEEEcCCCC
Q 039280 128 IHHVLITGLQPNTLYEYECGDPSI---SAMSSSHYFRTMPVS 166 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~~---~~~s~~~~F~T~p~~ 166 (487)
-....|+||+|+|.|.+||..-+. +.+|+...|+|.+..
T Consensus 69 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~G~~S~~~~~~T~~~~ 110 (119)
T d1x5ha1 69 QLSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFESD 110 (119)
T ss_dssp CCEEEEECCCSSCEEEEECEEEETTEEEEECCCEEEECCSSC
T ss_pred ccEEEeCCCCCCCEEEEEEEEEcCCcCCCCCCCEEEEeCCCC
Confidence 356789999999999999954322 247888899997643
|
| >d2gysa2 b.1.2.1 (A:104-217) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.64 E-value=0.041 Score=42.75 Aligned_cols=99 Identities=15% Similarity=0.127 Sum_probs=54.1
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
+..|..+++..+. +++.|+|.......+... .......-.|+|.............. . ..
T Consensus 6 P~pP~nl~v~~~~--~~~~lsW~~P~~~~~~~~--~~~~~~~y~v~~~~~~~~~~~~~~~~---~-------------~~ 65 (114)
T d2gysa2 6 PPEPRDLQISTDQ--DHFLLTWSVALGSPQSHW--LSPGDLEFEVVYKRLQDSWEDAAILL---S-------------NT 65 (114)
T ss_dssp CCCCEEEEEEEET--TEEEEEEECCC-----CC--SCGGGEEEEEEEEETTSCSTTCEEEE---E-------------SS
T ss_pred CCcCCCeEEEEeC--CEEEEECCCCcccccccc--eeeeEEEEEEEEeccCCceEEEEEee---c-------------cC
Confidence 3568999987644 689999988643111000 00000012355555443221111000 0 11
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCCC---------CCcCceEEEEcCCC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPSI---------SAMSSSHYFRTMPV 165 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~~---------~~~s~~~~F~T~p~ 165 (487)
.-..+.+.+|.|+|.|..||..... ..||+...|+|.|.
T Consensus 66 ~~~~~~~~~L~p~t~Y~~rVRa~~~~g~~~~g~wS~WS~~v~~~t~pg 113 (114)
T d2gysa2 66 SQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPG 113 (114)
T ss_dssp SEEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCC
T ss_pred ceEEEEeCCCCCCcEEEEEEEEEeCCCCCCCCCccCCcCCEeeeCcCC
Confidence 2346788999999999999954211 15777889999763
|
| >d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.55 E-value=0.023 Score=43.98 Aligned_cols=83 Identities=14% Similarity=0.012 Sum_probs=45.1
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
+..|..+.+.-.. ++++.|+|.-.... +. ....-.|+|................... ..
T Consensus 11 P~~P~~~~~~~~~-~~sv~l~W~pp~~~-~~-------~i~~y~v~~~~~~~~~~~~~~~~~~~~~------------~~ 69 (111)
T d1wisa1 11 PGPPTNLGISNIG-PRSVTLQFRPGYDG-KT-------SISRWLVEAQVGVVGEGEEWLLIHQLSN------------EP 69 (111)
T ss_dssp CCCCEEEEEESCC-SSCEEEEEECCCCC-SS-------CCSEEEEEECBSCCSTTSCCEEEEEEES------------CT
T ss_pred CcCCCCCEEEEcC-CCEEEEEEeCCCCC-CC-------ceeEEEEeeeecccCCCcceeeeeeeec------------cc
Confidence 3468888876433 68999999743311 10 0123456666543322211000000000 11
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPS 150 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~ 150 (487)
......|+||+|+|.|.+||...+
T Consensus 70 ~~~~~~v~~L~p~t~Y~frV~A~N 93 (111)
T d1wisa1 70 DARSMEVPDLNPFTCYSFRMRQVN 93 (111)
T ss_dssp TCSEEEECSCCTTSEECCCCEEEC
T ss_pred ceeEEEeCCCCCCCEEEEEEEEEc
Confidence 223567899999999999996544
|
| >d1bqua2 b.1.2.1 (A:100-214) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.54 E-value=0.027 Score=43.94 Aligned_cols=94 Identities=15% Similarity=0.082 Sum_probs=52.6
Q ss_pred CCCceEEEeecc-CCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 48 FQPEQIFVSLSA-RYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 48 ~~P~qi~l~~~~-~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
..|..+.+...+ .+++|.|+|.-.....+ + ...=.|+|....+...... . .....+
T Consensus 6 ~pP~~~~v~~~~~~~~si~v~W~~p~~~~~-------~-~~~Y~v~y~~~~~~~~~~~-------~--------~~~~~~ 62 (115)
T d1bqua2 6 NPPHNLSVINSEELSSILKLTWTNPSIKSV-------I-ILKYNIQYRTKDASTWSQI-------P--------PEDTAS 62 (115)
T ss_dssp CCCEEEEEECC--CCSCEEEEEECCGGGGT-------S-CEEEEEEEEETTCSSCEEC-------C--------GGGGCS
T ss_pred CCCCCCEEEEeccCCCEEEEEEeecccccc-------c-eeeeeeeeeeeeeeeeecc-------c--------cccccc
Confidence 358888887644 35889999975432111 0 1123455655443222110 0 001112
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCC---CC---CcCceEEEEcCC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPS---IS---AMSSSHYFRTMP 164 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~---~~---~~s~~~~F~T~p 164 (487)
....++|++|.|++.|.+||.... .+ .||....++|..
T Consensus 63 ~~~~~~i~~L~~~t~Y~~~V~a~~~~G~g~~S~~S~~~~~~T~~ 106 (115)
T d1bqua2 63 TRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE 106 (115)
T ss_dssp CCSEEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECC
T ss_pred cccEEeeCCCccCcEEEEEEEEEeCCCccCCcCCcCCEEEECCC
Confidence 335788999999999999994311 11 356677888854
|
| >d1cd9b2 b.1.2.1 (B:108-213) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.52 E-value=0.035 Score=42.85 Aligned_cols=78 Identities=10% Similarity=0.052 Sum_probs=44.9
Q ss_pred CCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCC-CCceEEEEEEEEeeeecCCCCCCccccCcEEEEEeCCCCC
Q 039280 60 RYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRS-SLTYQAEGYSLVYNQLYPPDGLQNYTSGIIHHVLITGLQP 138 (487)
Q Consensus 60 ~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~-~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~h~v~l~gL~P 138 (487)
.++++.|+|.......+ ....-.|+|....+ ..+..+.-. ..-.+..+|++|.|
T Consensus 20 ~~~~i~v~W~pp~~~~~--------~~~~Y~i~y~~~~~~~~w~~v~~~-----------------~~~~~~~~l~~L~p 74 (106)
T d1cd9b2 20 QPGCLWLSWKPWKPSEY--------MEQECELRYQPQLKGANWTLVFHL-----------------PSSKDQFELCGLHQ 74 (106)
T ss_dssp CCSCEEEEEECCGGGTT--------SCEEEEEEEEESSTTCCCEEEEEE-----------------ESCEEEEEECCCCS
T ss_pred CCCEEEEEEcCcccCCc--------cceEEEEEEeeccccccceeeecc-----------------cCCceEEEEeccCC
Confidence 46789999976442111 01234677876433 333332110 11245677999999
Q ss_pred CCEEEEEEecC---CCC---CcCceEEEEc
Q 039280 139 NTLYEYECGDP---SIS---AMSSSHYFRT 162 (487)
Q Consensus 139 ~T~Y~Y~vg~~---~~~---~~s~~~~F~T 162 (487)
+|.|.+||... +.+ .||...+|+|
T Consensus 75 ~t~Y~frVra~~~~g~g~wS~wS~~~~~~~ 104 (106)
T d1cd9b2 75 APVYTLQMRCIRSSLPGFWSPWSPGLQLRP 104 (106)
T ss_dssp CSCEEEEEEEEESSSCCCCCCCCCCEEECC
T ss_pred CeEEEEEEEEEeCCCCCCCcCCCCCeEecC
Confidence 99999999432 112 4556666665
|
| >d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Myosin binding protein C, fast-type species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.49 E-value=0.021 Score=43.52 Aligned_cols=83 Identities=11% Similarity=0.023 Sum_probs=46.6
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
..|..+.+.-.. .++++|+|.-....-+.. ...=.|+|...++..+..+. .. ...
T Consensus 3 ~~P~~~~v~~~~-~~sv~l~W~pP~~~~~~~-------i~~Y~V~~~~~~~~~~~~~~----------~~-------~~~ 57 (98)
T d1x5ya1 3 SAPQHLTVEDVT-DTTTTLKWRPPDRIGAGG-------IDGYLVEYCLEGSEEWVPAN----------KE-------PVE 57 (98)
T ss_dssp CCCEEEEEEEEC-SSEEEEEEECCSCCCSSC-------CCEEEEEEEETTCCCCEESS----------SS-------CBS
T ss_pred CCCcCcEEEEcc-CCEEEEEEECCCcCCCCC-------ceEEEEEEEecCcceeEEee----------ee-------cCc
Confidence 458888776444 689999998532110100 12245667665443222110 00 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCcC
Q 039280 128 IHHVLITGLQPNTLYEYECGDPSISAMS 155 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~~~~~s 155 (487)
...++|+||+|++.|.+||..-+..+.|
T Consensus 58 ~~~~~v~~L~~~~~Y~frV~A~n~~G~s 85 (98)
T d1x5ya1 58 RCGFTVKDLPTGARILFRVVGVNIAGRS 85 (98)
T ss_dssp SSEEEEECCCTTCCEEEEEEEEETTEEC
T ss_pred eeEEEECCCcCCeEEEEEEEEECCCcCC
Confidence 2356789999999999999754433333
|
| >d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.40 E-value=0.0051 Score=49.03 Aligned_cols=38 Identities=24% Similarity=0.284 Sum_probs=29.9
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCcCceEEEEcCCCC
Q 039280 129 HHVLITGLQPNTLYEYECGDPSI---SAMSSSHYFRTMPVS 166 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~~~---~~~s~~~~F~T~p~~ 166 (487)
.+++|++|+|+|.|.+||..... ..+|....|+|.+..
T Consensus 80 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 120 (125)
T d1uena_ 80 THGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGS 120 (125)
T ss_dssp SEEEEESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCCC
T ss_pred cEEEECCCCCCCEEEEEEEEEeCCcccCCCCCEEEECCCCC
Confidence 46889999999999999954332 257888999997643
|
| >d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.39 E-value=0.036 Score=42.51 Aligned_cols=96 Identities=11% Similarity=0.052 Sum_probs=54.2
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
..|..+.+.-.+ .+++.|+|......... ++ ...-.|+|............ .. .......
T Consensus 10 ~pP~~v~v~~~~-~~si~l~W~~p~~~~~~-----~~-i~~y~v~~~~~~~~~~~~~~-----~~--------~~~~~~~ 69 (109)
T d1va9a1 10 GPPMDVTLQPVT-SQSIQVTWKAPKKELQN-----GV-IRGYQIGYRENSPGSNGQYS-----IV--------EMKATGD 69 (109)
T ss_dssp SCCEEEEEEECS-SSEEEEEEECCCSSTTC-----SC-CCEEEEEEEESSTTSCCSCB-----CC--------BCCCCSS
T ss_pred CCCcCcEEEEec-CCEEEEEEcCCCCCCCC-----Cc-EEEEEEEEeeccccccceee-----ee--------EEecCCC
Confidence 458899886554 78999999875421100 00 11234556554322111100 00 0001234
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCcCceEEEEcC
Q 039280 128 IHHVLITGLQPNTLYEYECGDPSI---SAMSSSHYFRTM 163 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~~---~~~s~~~~F~T~ 163 (487)
..+++|++|+|+|.|.+||...+. +.+|+...|+|+
T Consensus 70 ~~~~~i~~L~p~t~Y~~~V~a~n~~G~g~~S~~v~~~T~ 108 (109)
T d1va9a1 70 SEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTL 108 (109)
T ss_dssp EEEEEEESCCSSCCEEEEEEEEETTEECCCCCCEECCCC
T ss_pred eeEEEECCCCcceEEEEEEEEEcCCcCCCCCCCEEEEcC
Confidence 567889999999999999954322 246777777764
|
| >d2fnba_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.37 E-value=0.021 Score=42.99 Aligned_cols=79 Identities=11% Similarity=0.059 Sum_probs=44.3
Q ss_pred CCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCcE
Q 039280 49 QPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGII 128 (487)
Q Consensus 49 ~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~ 128 (487)
.|..+++.--. .+++.|+|.-... +....=.|+|........... ... ..-.
T Consensus 8 ~P~~l~v~~~t-~~si~l~W~~p~~----------~~i~~Y~v~~~~~~~~~~~~~----~~~-------------~~~~ 59 (95)
T d2fnba_ 8 QLTDLSFVDIT-DSSIGLRWTPLNS----------STIIGYRITVVAAGEGIPIFE----DFV-------------DSSV 59 (95)
T ss_dssp CCTTCEEECCC-SSCEEEECCCCCC----------SSCCEEEEEEEEETSCCEEEE----EEC-------------CSSC
T ss_pred cCCCeEEEEEc-CCEEEEEEEecCC----------ceEEeEEEEEEEeeccceEEE----EEe-------------CCCC
Confidence 37777775544 6899999965321 011223466655433221111 000 1122
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCcC
Q 039280 129 HHVLITGLQPNTLYEYECGDPSISAMS 155 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~~~~~~s 155 (487)
..++|+||+|+|.|.++|..-...+.|
T Consensus 60 t~~~i~~L~p~t~Y~~~V~a~~~~g~s 86 (95)
T d2fnba_ 60 GYYTVTGLEPGIDYDISVITLINGGES 86 (95)
T ss_dssp SEEEECCCCTTSEEEEEEEEEETTEEC
T ss_pred eEEEEecccCCEEEEEEEEEEeCCcEe
Confidence 367899999999999999654333333
|
| >d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.26 E-value=0.05 Score=43.13 Aligned_cols=95 Identities=13% Similarity=0.082 Sum_probs=51.4
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
+..|..|++.-.+ .+++.|+|.-....-+ ....-.++|................ .
T Consensus 17 P~~P~~~~v~~~~-~~sv~l~W~~p~~~~~--------~i~~~~~~~~~~~~~~~~~~~~~~~----------------~ 71 (127)
T d1ueya_ 17 PNPPFDLELTDQL-DKSVQLSWTPGDDNNS--------PITKFIIEYEDAMHKPGLWHHQTEV----------------S 71 (127)
T ss_dssp CCCCEEEEEECCS-SSCEEEEEECCCCCSS--------CEEEEEEEEEBTTTCTTCEEEEEEE----------------E
T ss_pred CcCCCCcEEEEec-CCeEEEEEeCCccccc--------ceEeeeeeeccccccceeEEEEeec----------------C
Confidence 3468898887554 6899999975432100 0112345555443332221111100 0
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCCCC---CcCce-EEEEcCCCC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPSIS---AMSSS-HYFRTMPVS 166 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~~~---~~s~~-~~F~T~p~~ 166 (487)
.....+|.+|+|++.|.+||..-... .+|.. ..|+|.+..
T Consensus 72 ~~~~~~i~~L~p~t~Y~frV~A~n~~G~s~~S~~s~~~~t~~~~ 115 (127)
T d1ueya_ 72 GTQTTAQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASE 115 (127)
T ss_dssp SSCCEEEECCCTTCEECCEEEEEESSCBCCCCSCCCCEECCCSS
T ss_pred CceEEEECCCccCCEEEEEEEEEcCCcCcCCcCCcccEEcCCCC
Confidence 12345678999999999999543322 34433 456676543
|
| >d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.21 E-value=0.013 Score=44.85 Aligned_cols=87 Identities=13% Similarity=0.154 Sum_probs=46.2
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
..|..+++.... .+++.|+|.-....-|. ...=.|+|............... .. . . ..-
T Consensus 4 ~~P~~~~~~~~~-~~sv~v~W~~P~~~~g~--------i~~Y~i~~~~~~~~~~~~~~~~~--~~-~---~------~~~ 62 (103)
T d1qg3a2 4 SEPGRLAFNVVS-STVTQLSWAEPAETNGE--------ITAYEVCYGLVNDDNRPIGPMKK--VL-V---D------NPK 62 (103)
T ss_dssp CCCCCCEEEEEE-TTEEEEECCCCSCCSSC--------CCEEEEEEEEBCTTSCBCSCCEE--EE-E---C------CTT
T ss_pred ccCCCcEEEEec-CCEEEEEEEECccCCCC--------ceEEEEEeeccccccccccceEE--EE-e---c------CCC
Confidence 358888887665 67999999854321110 11234555444322111000000 00 0 0 011
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCcC
Q 039280 128 IHHVLITGLQPNTLYEYECGDPSISAMS 155 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~~~~~s 155 (487)
...++|+||+|++.|.+||..-+..+++
T Consensus 63 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g 90 (103)
T d1qg3a2 63 NRMLLIENLRESQPYRYTVKARNGAGWG 90 (103)
T ss_dssp CCEEEECCCCTTCCEEEEEEEEETTEEC
T ss_pred ceEEEEeecCCCCEEEEEEEEEcCCccC
Confidence 2367899999999999999754433444
|
| >d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.16 E-value=0.016 Score=45.10 Aligned_cols=22 Identities=23% Similarity=0.443 Sum_probs=18.2
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 039280 129 HHVLITGLQPNTLYEYECGDPS 150 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~~ 150 (487)
..++|+||+|+|.|.|||...+
T Consensus 69 ~~~~i~~L~p~t~Y~frV~A~N 90 (108)
T d1wf5a1 69 TSVTVKGLVPARSYQFRLCAVN 90 (108)
T ss_dssp CEEEEESCCTTCEEEEEEEEEE
T ss_pred cEEEECCCCCCCEEEEEEEEEc
Confidence 3567899999999999996543
|
| >d1x5ia1 b.1.2.1 (A:8-120) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.15 E-value=0.037 Score=43.13 Aligned_cols=89 Identities=15% Similarity=0.040 Sum_probs=52.0
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
..|..+++..+ .+++.|+|.-....-| . ...=.|+|+..... ... ... ...
T Consensus 22 ~~P~~~~~~~~--~~si~v~W~~p~~~~g-~-------i~~Y~i~~~~~~~~-~~~-----~~~-------------~~~ 72 (113)
T d1x5ia1 22 EVPSSLHVRPL--VTSIVVSWTPPENQNI-V-------VRGYAIGYGIGSPH-AQT-----IKV-------------DYK 72 (113)
T ss_dssp CSCSEEEEEEE--TTEEEEEEECCSCTTB-C-------CCEEEEEECSSCGG-GEE-----EEC-------------CTT
T ss_pred CCCEeeeeeeC--CCEEEEEEEccccCCc-c-------EEEEEEEeeecccc-cee-----eee-------------eCC
Confidence 46888888654 3689999985432101 0 11235666654322 111 101 112
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCCCcCc--eEEEEcCCC
Q 039280 128 IHHVLITGLQPNTLYEYECGDPSISAMSS--SHYFRTMPV 165 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~~~~~s~--~~~F~T~p~ 165 (487)
....+|.+|+|++.|.+||...+..+.++ .-.++|.|.
T Consensus 73 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~~~~~~~T~P~ 112 (113)
T d1x5ia1 73 QRYYTIENLDPSSHYVITLKAFNNVGEGIPLYESAVTRPH 112 (113)
T ss_dssp CCEEEECSCCSSCEECCEEEEECSSCBCCCCCCCEECCCC
T ss_pred ccEEEEeccccCcEEEEEEEEECCCcCCCCeeeEEEeCCC
Confidence 34667999999999999997655445554 346777664
|
| >d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.06 E-value=0.031 Score=42.95 Aligned_cols=84 Identities=15% Similarity=0.097 Sum_probs=45.9
Q ss_pred cCCCCCCCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCC
Q 039280 41 NNAQGEGFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGL 120 (487)
Q Consensus 41 ~~~~~~~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~ 120 (487)
+..++.+..|..+++.-.. .+++.|+|......-| ....=.|+|........... ..
T Consensus 5 ~T~e~vP~~p~~l~~~~~~-~~sv~l~W~~P~~~ng--------~i~~Y~i~~~~~~~~~~~~~----~~---------- 61 (106)
T d1wfna1 5 RTHEDVPGPVGHLSFSEIL-DTSLKVSWQEPGEKNG--------ILTGYRISWEEYNRTNTRVT----HY---------- 61 (106)
T ss_dssp CSSCCSCCCCSCCEEESCC-SSEEEEECCCCTTCCS--------CCCEEEEEEEESSCGGGCCC----EE----------
T ss_pred EcCCCCCcCCCCcEEEEec-CCEEEEEEECCCCCCC--------cEEeEEEEEEECCCCcceEE----Ee----------
Confidence 3344445568888875544 5899999965332101 01123355544332211100 00
Q ss_pred CccccCcEEEEEeCCCCCCCEEEEEEecCC
Q 039280 121 QNYTSGIIHHVLITGLQPNTLYEYECGDPS 150 (487)
Q Consensus 121 ~~~~~~~~h~v~l~gL~P~T~Y~Y~vg~~~ 150 (487)
........+|+||+|+|.|.+||...+
T Consensus 62 ---~~~~~~~~~i~~L~p~t~Y~~~V~A~n 88 (106)
T d1wfna1 62 ---LPNVTLEYRVTGLTALTTYTIEVAAMT 88 (106)
T ss_dssp ---ECSSCCEEEEESCCTTCEEEEEEEEEC
T ss_pred ---cCCCeeEEEEccCCCCCEEEEEEEEEC
Confidence 011234677899999999999996543
|
| >d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=94.85 E-value=0.069 Score=41.02 Aligned_cols=29 Identities=14% Similarity=0.146 Sum_probs=22.2
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCCCCCcC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPSISAMS 155 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~~~~~s 155 (487)
.-...+|+||+|+|.|.+||...+..+.|
T Consensus 66 ~~~~~~i~~L~p~t~Y~frV~A~N~~G~s 94 (107)
T d2ic2a1 66 KSFTASVTDLKPQHTYRFRILAVYSNNDN 94 (107)
T ss_dssp EEEEEEECSCCSSEEEEEEEEEEETTSCE
T ss_pred ceeEEEECCCcCCcEEEEEEEEEcCCCCC
Confidence 45678899999999999999765433444
|
| >d1v5ja_ b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1355 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.85 E-value=0.051 Score=41.95 Aligned_cols=91 Identities=18% Similarity=0.125 Sum_probs=52.6
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
..|..+.++. .+++++|+|.-.....+ ....=.|+|...... +...... + ...
T Consensus 9 sPP~~~~~~~--t~~si~l~W~pp~~~~~--------~i~~Y~v~~~~~~~~-~~~~~~~---~-------------~~~ 61 (108)
T d1v5ja_ 9 SPPRGLVAVR--TPRGVLLHWDPPELVPK--------RLDGYVLEGRQGSQG-WEVLDPA---V-------------AGT 61 (108)
T ss_dssp CCCEEEEEEE--CSSSEEEEEECCSCCSS--------CCCBEEEEEEETTCC-CEEEEEE---E-------------CSS
T ss_pred CcCCCeEEEE--cCCEEEEEEEecccCCC--------ceeEEEEEeeeeeee-eeecccc---c-------------cce
Confidence 3478887654 35789999975432111 012346777765432 2221110 0 112
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCC---CcCceEEEEcCCC
Q 039280 128 IHHVLITGLQPNTLYEYECGDPSIS---AMSSSHYFRTMPV 165 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~~~---~~s~~~~F~T~p~ 165 (487)
...++|++|+|+|.|.|||..-... .+|+...++|...
T Consensus 62 ~~~~~i~~L~p~t~Y~~rV~A~n~~g~s~~S~~~~~~T~~~ 102 (108)
T d1v5ja_ 62 ETELLVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTSGL 102 (108)
T ss_dssp CCEEECCCCCTTSCEECCBEEEETTEEEEECSCCCCCCSSC
T ss_pred eeeEEEEeccCCcEEEEEEEEEeCCCEeCCcCceEEECCCC
Confidence 3567899999999999999643322 4555666777543
|
| >d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.84 E-value=0.05 Score=43.10 Aligned_cols=40 Identities=23% Similarity=0.180 Sum_probs=30.0
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCcCceEEEEcCCCCC
Q 039280 128 IHHVLITGLQPNTLYEYECGDPSI---SAMSSSHYFRTMPVSG 167 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~~---~~~s~~~~F~T~p~~~ 167 (487)
..+.+|+||+|+|.|.+||..-.. ...|+...++|.+..+
T Consensus 74 ~~s~~i~~L~p~t~Y~f~V~A~n~~G~G~~S~~~~~~T~e~~~ 116 (120)
T d1ujta_ 74 ERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEESG 116 (120)
T ss_dssp CCEEEEESCCSSEEEEEEEEEESSSCCCCCCCCEEEEECSSCC
T ss_pred eeEEEECCCCCCCEEEEEEEEEeCCcCcCCCCCEEEEeCCCCc
Confidence 346778999999999999954332 2467788899987643
|
| >d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.82 E-value=0.057 Score=42.29 Aligned_cols=21 Identities=29% Similarity=0.517 Sum_probs=17.6
Q ss_pred EEEeCCCCCCCEEEEEEecCC
Q 039280 130 HVLITGLQPNTLYEYECGDPS 150 (487)
Q Consensus 130 ~v~l~gL~P~T~Y~Y~vg~~~ 150 (487)
..+|++|+|+|.|.+||...+
T Consensus 73 ~~~v~~L~p~t~Y~frV~A~N 93 (117)
T d1uema_ 73 LYTVRGLRPNTIYLFMVRAIN 93 (117)
T ss_dssp EEEECSCCTTCEEEEEEEEEE
T ss_pred cceECCCCCCCEEEEEEEEEe
Confidence 457899999999999996543
|
| >d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.58 E-value=0.028 Score=44.41 Aligned_cols=37 Identities=30% Similarity=0.355 Sum_probs=28.3
Q ss_pred EEEeCCCCCCCEEEEEEecCCCC---CcCceEEEEcCCCC
Q 039280 130 HVLITGLQPNTLYEYECGDPSIS---AMSSSHYFRTMPVS 166 (487)
Q Consensus 130 ~v~l~gL~P~T~Y~Y~vg~~~~~---~~s~~~~F~T~p~~ 166 (487)
..+|++|+|+|.|.+||...+.. .+|+...++|.+..
T Consensus 76 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 115 (120)
T d1wfua_ 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRES 115 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCCC
T ss_pred EEeCCCCCCCcEeeEEEEEEeCCcEeCCCCCEEEEeCCCC
Confidence 46789999999999999654322 46778889887554
|
| >d1n26a3 b.1.2.1 (A:196-299) Interleukin-6 receptor alpha chain, domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-6 receptor alpha chain, domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.58 E-value=0.085 Score=40.14 Aligned_cols=77 Identities=13% Similarity=0.018 Sum_probs=45.9
Q ss_pred CCCceEEEeec-cCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 48 FQPEQIFVSLS-ARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 48 ~~P~qi~l~~~-~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
..|..+.+... ..++++.|+|.......+. .....-.|+|............ . .+
T Consensus 3 ~pP~~l~v~~~~~~~~~l~v~W~~P~~~~~~------~~~~~y~v~~~~~~~~~~~~~~-----~-------------~~ 58 (104)
T d1n26a3 3 DPPANITVTAVARNPRWLSVTWQDPHSWNSS------FYRLRFELRYRAERSKTFTTWM-----V-------------KD 58 (104)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEECCTTCCCS------SSCEEEEEEEEETTCSCCEEEE-----C-------------GG
T ss_pred cCCCCCEEEEEecCCCEEEEEEEeeeecCCC------ceeEEEEEEEeeCCCCceeeec-----c-------------cc
Confidence 46888888764 4568999999864321000 0112345667665443322211 0 11
Q ss_pred cEEEEEeCCCCCCCEEEEEEec
Q 039280 127 IIHHVLITGLQPNTLYEYECGD 148 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~ 148 (487)
......|.+|+|+|.|.+||..
T Consensus 59 ~~~~~~i~~L~p~t~Y~~rVra 80 (104)
T d1n26a3 59 LQHHCVIHDAWSGLRHVVQLRA 80 (104)
T ss_dssp GCSEEEESSCCTTCCEEEEEEE
T ss_pred ceEEEEECCCCCCCEEEEEEEE
Confidence 2236778999999999999954
|
| >d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.55 E-value=0.059 Score=43.42 Aligned_cols=38 Identities=16% Similarity=0.260 Sum_probs=29.2
Q ss_pred EEEEeCCCCCCCEEEEEEecCCC---CCcCceEEEEcCCCC
Q 039280 129 HHVLITGLQPNTLYEYECGDPSI---SAMSSSHYFRTMPVS 166 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~~~---~~~s~~~~F~T~p~~ 166 (487)
..++|+||+|+|.|.+||..... ..+|+...|+|.+..
T Consensus 82 ~~~~i~~L~P~t~Y~f~V~A~n~~G~g~~S~~~~~~T~~~~ 122 (137)
T d1wk0a_ 82 TNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSCE 122 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCSS
T ss_pred cEEEECCCCCCcEEEEEEEEEcCCcccCCCCCEEEECCCCC
Confidence 35789999999999999954332 257788889997554
|
| >d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Type I titin module species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.48 E-value=0.059 Score=40.99 Aligned_cols=22 Identities=18% Similarity=0.442 Sum_probs=18.5
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 039280 129 HHVLITGLQPNTLYEYECGDPS 150 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~~ 150 (487)
...+|+||+|+|.|.|||...+
T Consensus 60 ~~~~i~~L~p~t~Y~frV~A~n 81 (104)
T d1bpva_ 60 NEFTVSGLTEDAAYEFRVIAKN 81 (104)
T ss_dssp SEEEECSCCSSCCEEEEEEEEC
T ss_pred eEEEEcCCCCCCEEEEEEEEEE
Confidence 4567899999999999997644
|
| >d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase F, PTPRF species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.39 E-value=0.1 Score=38.81 Aligned_cols=79 Identities=15% Similarity=0.280 Sum_probs=43.4
Q ss_pred CCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCcE
Q 039280 49 QPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGII 128 (487)
Q Consensus 49 ~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~ 128 (487)
.|..+ ++- ...+++.|+|.-....-| ....-.|+|............ +. ...
T Consensus 3 ~P~~~-~~~-~~~~sv~l~W~pP~~~~g--------~i~~Y~i~~~~~~~~~~~~~~-----~~-------------~~~ 54 (94)
T d2dn7a1 3 RPTMM-IST-TAMNTALLQWHPPKELPG--------ELLGYRLQYCRADEARPNTID-----FG-------------KDD 54 (94)
T ss_dssp CCEEE-EEE-CSTTEEEEEEECCSSCSS--------CCCEEEEEEEETTCSSCEEEE-----EE-------------TTC
T ss_pred CCcEe-EEE-EeCCEEEEEEeCCCCCCC--------ceEEEEEEEEEcCCCCcEEEE-----cC-------------CCc
Confidence 46433 333 235799999986432111 112345677665543332211 11 112
Q ss_pred EEEEeCCCCCCCEEEEEEecCCCCCcC
Q 039280 129 HHVLITGLQPNTLYEYECGDPSISAMS 155 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~~~~~~s 155 (487)
...+|++|+|+|.|.+||..-+..+.+
T Consensus 55 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g 81 (94)
T d2dn7a1 55 QHFTVTGLHKGTTYIFRLAAKNRAGLG 81 (94)
T ss_dssp CEEEEECCCTTCEEEEEEEEEETTEEE
T ss_pred cEEEEEccCCeeEEEEEEEEEcCCcCC
Confidence 356789999999999999654433333
|
| >d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=93.76 E-value=0.1 Score=39.84 Aligned_cols=80 Identities=10% Similarity=0.056 Sum_probs=44.9
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
..|..|.+.-.. .++|+|+|.-....... ++ ...=.|+|........... .. .. ...
T Consensus 6 ~~P~~v~~~~~~-~~si~v~W~p~~~~~~n-----g~-i~~Y~I~y~~~~~~~~~~~---~~-~~------------~~~ 62 (105)
T d1cfba2 6 KNPDNVVGQGTE-PNNLVISWTPMPEIEHN-----AP-NFHYYVSWKRDIPAAAWEN---NN-IF------------DWR 62 (105)
T ss_dssp CCCSCCEEECSS-TTCEEEECCCCCGGGTC-----SS-SCEEEEEEEESSTTCCCEE---EE-EC------------CTT
T ss_pred CCCcCeEEEEcc-CCeEEEEEeCCChhhcC-----ce-EEEEEEEeeeeccccceeE---EE-ec------------CCC
Confidence 458888876544 78999999642211100 00 1223466665433222110 00 00 112
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC
Q 039280 128 IHHVLITGLQPNTLYEYECGDPS 150 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~ 150 (487)
....+|++|+|+|.|.+||...+
T Consensus 63 ~~~~~i~~L~p~t~Y~~~V~A~N 85 (105)
T d1cfba2 63 QNNIVIADQPTFVKYLIKVVAIN 85 (105)
T ss_dssp CCEEEECSCCSSCEEEEEEEEEE
T ss_pred ccEEEECCCCCCCEEEEEEEEEe
Confidence 34678999999999999996543
|
| >d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Host cell factor 2, HCF-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.64 E-value=0.046 Score=43.27 Aligned_cols=107 Identities=11% Similarity=0.140 Sum_probs=56.1
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEE--EEEEEEeeeecCCCCCCccc
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQA--EGYSLVYNQLYPPDGLQNYT 124 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~--~g~~~~~~~~~~~~g~~~~~ 124 (487)
+..|..|.++. ..+++.|+|.-....-| . ...=.|+|........... ......+... ......
T Consensus 8 P~aP~~v~v~~--~~~si~l~W~~P~~~~g-~-------i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 73 (123)
T d1wfta_ 8 PGAPSTVRISK--NVDGIHLSWEPPTSPSG-N-------ILEYSAYLAIRTAQMQDNPSQLVFMRIYCGL----KTSCTV 73 (123)
T ss_dssp CCCCEEEEEEE--CSSEEEEEEECCSSCCS-S-------CCCEEEEEEECSSCCCSCSCCCEEEEEEEES----CSEEEE
T ss_pred CcCCcccEEEe--CCCEEEEEecCchhcCC-c-------eEEEEEEEEECCCCCccccceeeeEEEecCC----ceeEee
Confidence 45789898865 35789999985432211 1 1234677766543221100 0001111100 000000
Q ss_pred cCcEEEEEeCCCCCCCEEEEEEecCCCC---CcCceEEEEcCCCCC
Q 039280 125 SGIIHHVLITGLQPNTLYEYECGDPSIS---AMSSSHYFRTMPVSG 167 (487)
Q Consensus 125 ~~~~h~v~l~gL~P~T~Y~Y~vg~~~~~---~~s~~~~F~T~p~~~ 167 (487)
.+.....+|++|+|+|.|.+||...+.. .+|+...|+|....+
T Consensus 74 ~~~~~~~~i~~L~p~t~Y~frV~A~N~~G~Gp~S~~~~~~t~~~~~ 119 (123)
T d1wfta_ 74 TAGQLANAHIDYTSRPAIVFRISAKNEKGYGPATQIRWLQGNSKSG 119 (123)
T ss_dssp EHHHHTTCCCBCSSSCEEEEEEEEBSSSSBCCCEEEEEECCSCCSS
T ss_pred cCCccEEEEcCCCCCCEEEEEEEEecCCcCCCCCCcEEEEecCCCC
Confidence 0001123578999999999999665433 456778888866543
|
| >d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.42 E-value=0.13 Score=38.07 Aligned_cols=20 Identities=25% Similarity=0.376 Sum_probs=17.6
Q ss_pred EEEEeCCCCCCCEEEEEEec
Q 039280 129 HHVLITGLQPNTLYEYECGD 148 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~ 148 (487)
..+.|+||+|+|.|.++|..
T Consensus 50 t~~~l~~L~p~t~Y~~~V~a 69 (91)
T d1fnaa_ 50 STATISGLKPGVDYTITVYA 69 (91)
T ss_dssp CEEEECSCCTTCEEEEEEEE
T ss_pred cEEEeCCCCCCCEEEEEEEE
Confidence 36789999999999999964
|
| >d1cd9b1 b.1.2.1 (B:1-107) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.23 E-value=0.16 Score=38.70 Aligned_cols=85 Identities=11% Similarity=-0.010 Sum_probs=45.5
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
+..|..|+.......++|+++|.-.... + ....-.+.|............-...... . ...
T Consensus 5 P~~P~~v~~i~~~~~~sv~~sW~p~~d~-~--------~~~~y~~~y~~~~~~~~~~~~~~~~~~~----~------~~~ 65 (107)
T d1cd9b1 5 PASPSNLSCLMHLTTNSLVCQWEPGPET-H--------LPTSFILKSFRSRADCQYQGDTIPDCVA----K------KRQ 65 (107)
T ss_dssp CCCCEEEEEEEETTTTEEEEEEECCSCC-S--------SCCEEEEEEEECCGGGCSCCCEEEEEEC----C------TTC
T ss_pred cCCCcCCEEEEecCCCEEEEEEcCCCCC-C--------CCcceeEEEEEeecccceeeeeeeeecc----c------cCc
Confidence 3468888732233468999999755321 1 0123355555443221111100000000 0 112
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCC
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPS 150 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~ 150 (487)
..-.+.+++|+|++.|.+||...+
T Consensus 66 ~~~~~~~~~L~~~t~Y~frV~A~N 89 (107)
T d1cd9b1 66 NNCSIPRKNLLLYQYMAIWVQAEN 89 (107)
T ss_dssp CEEEEEGGGCCTTSCEEEEEEEEE
T ss_pred cccEEEcCCCCcCceEEEEEEEEe
Confidence 456788999999999999997554
|
| >d1axib2 b.1.2.1 (B:131-236) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Growth hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.47 E-value=0.084 Score=40.56 Aligned_cols=34 Identities=18% Similarity=0.217 Sum_probs=24.2
Q ss_pred EEEEeCCCCCCCEEEEEEecC--CC---CCcCceEEEEc
Q 039280 129 HHVLITGLQPNTLYEYECGDP--SI---SAMSSSHYFRT 162 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~~--~~---~~~s~~~~F~T 162 (487)
..++|++|+|+|.|.+||... .. +.||+...++|
T Consensus 65 ~~~~i~~L~~~t~Y~frVRa~~~~~g~ws~wS~~v~v~~ 103 (106)
T d1axib2 65 TSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTL 103 (106)
T ss_dssp SEEEEEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECC
T ss_pred ceEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEC
Confidence 367899999999999999542 21 25666666655
|
| >d2gysa4 b.1.2.1 (A:317-416) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.56 E-value=0.14 Score=38.46 Aligned_cols=20 Identities=25% Similarity=0.366 Sum_probs=17.3
Q ss_pred EEEEeCCCCCCCEEEEEEec
Q 039280 129 HHVLITGLQPNTLYEYECGD 148 (487)
Q Consensus 129 h~v~l~gL~P~T~Y~Y~vg~ 148 (487)
..+.|.+|+|++.|.+||..
T Consensus 61 ~~~~l~~L~p~t~Y~~rVRa 80 (100)
T d2gysa4 61 HSMALPALEPSTRYWARVRV 80 (100)
T ss_dssp SEEECCCCCSSCCCEEEEEE
T ss_pred eEEEeCCCCCCCeEEEEEEE
Confidence 36789999999999999954
|
| >d2cspa1 b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Rim binding protein 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.00 E-value=0.1 Score=40.92 Aligned_cols=94 Identities=11% Similarity=0.024 Sum_probs=52.5
Q ss_pred CCCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccC
Q 039280 47 GFQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSG 126 (487)
Q Consensus 47 ~~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 126 (487)
+..|..|.+.....+++|.|+|.-..... . +......++.|....+..... .... ...
T Consensus 11 p~pP~~v~v~~~~s~~si~vsW~PP~~~~-~-----~~~~~~~i~~Y~v~~~~~~~~------~~~~----------~~~ 68 (117)
T d2cspa1 11 PAPPQDVTVQAGVTPATIRVSWRPPVLTP-T-----GLSNGANVTGYGVYAKGQRVA------EVIF----------PTA 68 (117)
T ss_dssp CCCCEEEEECCCSSTTEEEEEEECCCCCT-T-----SCSSSSCEEEEEEESSSSEEE------EECC----------TTC
T ss_pred CCCCCccEEEEecCCCEEEEEEcCCCccc-c-----CcccccceEEEEEEeecccce------eeee----------ecc
Confidence 45689888866555789999997532110 0 001123467786643221111 0000 112
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCCC---CCcCceEEEEc
Q 039280 127 IIHHVLITGLQPNTLYEYECGDPSI---SAMSSSHYFRT 162 (487)
Q Consensus 127 ~~h~v~l~gL~P~T~Y~Y~vg~~~~---~~~s~~~~F~T 162 (487)
-...++|+||+|+|.|.+||...+. +.+|..-.++|
T Consensus 69 ~~~~~~i~~L~~~t~Y~v~V~A~n~~G~s~~S~~v~i~t 107 (117)
T d2cspa1 69 DSTAVELVRLRSLEAKGVTVRTLSAQGESVDSAVAAVPP 107 (117)
T ss_dssp SEEEEESHHHHHHTCSCBEEEEEESSCCCCCCSCBCCCH
T ss_pred ceeeeeccCCCCCcEEEEEEEEEcCCCcCCCCCCEEeeC
Confidence 3456789999999999999954332 23555555554
|
| >d3d85d3 b.1.2.1 (D:212-305) The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.43 E-value=0.23 Score=37.05 Aligned_cols=25 Identities=16% Similarity=0.209 Sum_probs=17.7
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCC
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGE 72 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~ 72 (487)
..|+.|.+....+++.+.|+|....
T Consensus 3 dPP~nl~v~~~~~~~~l~v~W~~P~ 27 (94)
T d3d85d3 3 DPPKNLQLKPLKNSRQVEVSWEYPD 27 (94)
T ss_dssp CCCEEEEEEEC----CEEEEEECCT
T ss_pred CCCcccEEEEecCCCeEEEEecCCC
Confidence 4589999988776778999998865
|
| >d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.41 E-value=0.33 Score=39.86 Aligned_cols=37 Identities=27% Similarity=0.306 Sum_probs=26.5
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCCC------CcCceEEEEcCC
Q 039280 128 IHHVLITGLQPNTLYEYECGDPSIS------AMSSSHYFRTMP 164 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~~~------~~s~~~~F~T~p 164 (487)
..+.+|+||+|+|.|.++|..-... ..+....|+|+|
T Consensus 154 ~~~~~i~~L~p~t~Y~~~V~A~n~~~~~~~~s~s~~~~~rT~P 196 (196)
T d2dtge2 154 KESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMP 196 (196)
T ss_dssp CSEEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEECCC
T ss_pred eEEEEECCCCCCCEEEEEEEEEECCCCCCCccCcceEEeeCCC
Confidence 3468899999999999999542211 234567788876
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.25 E-value=0.52 Score=43.78 Aligned_cols=21 Identities=14% Similarity=0.143 Sum_probs=18.9
Q ss_pred HHHHHHHHHHcCCcEEEeCcc
Q 039280 363 RVEMEDLLYYYGVDIVFNGHV 383 (487)
Q Consensus 363 r~~l~~l~~~~~VdlvlsGH~ 383 (487)
.+.++..++++++++++=||.
T Consensus 233 ~~~~~~Fl~~n~l~lIIR~He 253 (324)
T d1s95a_ 233 PDVTKAFLEENNLDYIIRSHE 253 (324)
T ss_dssp HHHHHHHHHHHTCCEEEECCS
T ss_pred HHHHHHHHHHcCCcEEEEcCc
Confidence 367889999999999999997
|
| >d1wj3a_ b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Contactin 3 (KIAA1496) species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.02 E-value=1.2 Score=34.09 Aligned_cols=33 Identities=12% Similarity=-0.053 Sum_probs=22.2
Q ss_pred EeCCCCCCCEEEEEEecCC---CCCcCceEEEEcCC
Q 039280 132 LITGLQPNTLYEYECGDPS---ISAMSSSHYFRTMP 164 (487)
Q Consensus 132 ~l~gL~P~T~Y~Y~vg~~~---~~~~s~~~~F~T~p 164 (487)
.+.+|+|+|.|.+||...+ ...+|+...+.+..
T Consensus 75 ~~~~L~p~t~Y~~~V~A~n~~G~G~~S~~v~v~~~~ 110 (117)
T d1wj3a_ 75 AELVLPIKEDYIIEVKATTDGGDGTSSEQIRIPRIT 110 (117)
T ss_dssp EEEECCCSSCEEEEEEEEESSCCCCBCCCEEECCCC
T ss_pred EEeeccCCcEEEEEEEEEcCCccCCCCCCEEEeccC
Confidence 4558999999999996422 23567666664443
|
| >d1bqua1 b.1.2.1 (A:5-99) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.41 E-value=1 Score=33.10 Aligned_cols=76 Identities=7% Similarity=-0.127 Sum_probs=43.3
Q ss_pred CCCceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCc
Q 039280 48 FQPEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGI 127 (487)
Q Consensus 48 ~~P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 127 (487)
..|..+++.-.. .++|+++|.-.... + ....-.|+|.......... .....+ -
T Consensus 5 ~~P~n~~~~~~~-~~si~~~W~p~~~~-~--------~~~~y~v~~~~~~~~~~~~----------~~~~~~-------~ 57 (95)
T d1bqua1 5 EKPKNLSCIVNE-GKKMRCEWDGGRET-H--------LETNFTLKSEWATHKFADC----------KAKRDT-------P 57 (95)
T ss_dssp CCCEEEEEEEET-TSCCEEEEECCSCC-S--------SCCEEEEEEEETTEECCCE----------ECCSSC-------T
T ss_pred CCCeeeEEEEcc-CCEEEEEEeCcccC-C--------CceEEEEEEEEcccceeEe----------eccccc-------c
Confidence 468888886554 68899999765421 1 0123455665543211111 001111 1
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC
Q 039280 128 IHHVLITGLQPNTLYEYECGDPS 150 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~ 150 (487)
--...+.+|.|++.|++||...+
T Consensus 58 ~~~~~~~~L~~~~~Y~f~V~A~N 80 (95)
T d1bqua1 58 TSCTVDYSTVYFVNIEVWVEAEN 80 (95)
T ss_dssp TEEECSSCCCTTSCEEEEEEEEE
T ss_pred eeeeeeeecCCCcEEEEEEEEEe
Confidence 12345679999999999997544
|
| >d1fyhb1 b.1.2.1 (B:12-109) Interferon-gamma receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interferon-gamma receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.40 E-value=1.5 Score=32.06 Aligned_cols=23 Identities=4% Similarity=-0.172 Sum_probs=18.1
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC
Q 039280 128 IHHVLITGLQPNTLYEYECGDPS 150 (487)
Q Consensus 128 ~h~v~l~gL~P~T~Y~Y~vg~~~ 150 (487)
.....+.+|.+++.|++||....
T Consensus 56 ~~~~~~~~l~~~~~Y~fRV~A~n 78 (98)
T d1fyhb1 56 YCNISDHVGDPSNSLWVRVKARV 78 (98)
T ss_dssp EEECGGGCCSTTSCEEEEEEEEE
T ss_pred eeeeEecccCCCCEEEEEEEEEc
Confidence 34556789999999999997543
|
| >d1y6kr1 b.1.2.1 (R:2-100) Interleukin-10 receptor 1, IL-10R1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-10 receptor 1, IL-10R1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.22 E-value=0.87 Score=34.03 Aligned_cols=83 Identities=12% Similarity=-0.035 Sum_probs=47.2
Q ss_pred CceEEEeeccCCCcEEEEEEcCCCCCCCCCCCCCCCCCccEEEEeccCCCCceEEEEEEEEeeeecCCCCCCccccCcEE
Q 039280 50 PEQIFVSLSARYDSVWISWITGEFQIGDNISPLDPELVQSIVYFRVFRSSLTYQAEGYSLVYNQLYPPDGLQNYTSGIIH 129 (487)
Q Consensus 50 P~qi~l~~~~~~~~~~V~W~T~~~~~~~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~h 129 (487)
|..|+|...+ ..++++|.-.... +....=.|+|...+..-+..+...... ...--
T Consensus 7 P~nv~~~s~n--~~~~L~W~pp~~~---------g~~~~Y~Ve~~~~~~~~W~~v~~c~~~--------------t~~~~ 61 (99)
T d1y6kr1 7 PPSVWFEAEF--FHHILHWTPIPQQ---------SESTCYEVALLRYGIESWNSISQCSQT--------------LSYDL 61 (99)
T ss_dssp CSCEEEEEET--TEEEEEECCCTTC---------CTTCEEEEEEEETTSCCCEEEEEEESS--------------SEEEC
T ss_pred CCcceEEEEC--CEEEEEEcCCCCc---------CCCCEEEEEEEECCCcceEEEEeeccc--------------cccce
Confidence 8888875544 5799999543321 112345788876655555554332100 00001
Q ss_pred EEEeCCCCCCCEEEEEEecCCCCCcCce
Q 039280 130 HVLITGLQPNTLYEYECGDPSISAMSSS 157 (487)
Q Consensus 130 ~v~l~gL~P~T~Y~Y~vg~~~~~~~s~~ 157 (487)
...+.+|.++..|++||......+.|++
T Consensus 62 ~~~~~~l~~~~~Y~fRVrA~n~~g~S~W 89 (99)
T d1y6kr1 62 TAVTLDLYHSNGYRARVRAVDGSRHSQW 89 (99)
T ss_dssp GGGGTTGGGSSCEEEEEEEEETTEECCC
T ss_pred eeeeeecCCCCEEEEEEEEEcCCCcCCC
Confidence 1235789999999999976443344443
|
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Probab=82.42 E-value=0.6 Score=42.77 Aligned_cols=23 Identities=13% Similarity=0.180 Sum_probs=19.7
Q ss_pred HHHHHHHHHHcCCcEEEeCcccc
Q 039280 363 RVEMEDLLYYYGVDIVFNGHVHA 385 (487)
Q Consensus 363 r~~l~~l~~~~~VdlvlsGH~H~ 385 (487)
.+.++..+++++.++++=||.-.
T Consensus 224 ~~~~~~Fl~~n~l~~IIR~He~~ 246 (294)
T d1jk7a_ 224 AEVVAKFLHKHDLDLICRAHQVV 246 (294)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCC
T ss_pred HHHHHHHHHHCCCCEEEEcCccc
Confidence 46788999999999999999743
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| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.78 E-value=0.66 Score=42.35 Aligned_cols=22 Identities=18% Similarity=0.101 Sum_probs=18.7
Q ss_pred HHHHHHHHHHcCCcEEEeCccc
Q 039280 363 RVEMEDLLYYYGVDIVFNGHVH 384 (487)
Q Consensus 363 r~~l~~l~~~~~VdlvlsGH~H 384 (487)
.+.+++.++++++++++-||.=
T Consensus 217 ~~~~~~Fl~~n~l~~IIR~He~ 238 (288)
T d3c5wc1 217 QDISETFNHANGLTLVSRAHQL 238 (288)
T ss_dssp HHHHHHHHHHTTCSEEEECCSC
T ss_pred HHHHHHHHHHCCCcEEEcCCCc
Confidence 3577889999999999999873
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