Citrus Sinensis ID: 039303

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-
GCDASVLLDDTSSFTGEKSASANVNSIRGFEVIDSVKSEVESLCPGVVSCADILAVAARDSVVAFGGPSWTVQLGRRDSTTASSSAVNTNIPSPLMDLNDLISNFAKKGLSAKEMVALSGAHTIGQARCLLFRQRIYNETNIDSEFATSLKSNCPSSGGDDNLSSLDATSP
cccccEEccccccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccccccccccHHHccHHHHccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccc
ccccHHHcccccccccHHHccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccccEccEEcccccHHHHHHHcccccccHHHHHHHHHHHcccHHHHHHHHHHHHccEEEHHHcHHHcccccccccccccHHHHHcccccccccccccccccc
gcdasvllddtssftgeksasanvnsirgfEVIDSVKSEVeslcpgvvsCADILAVAARDsvvafggpswtvqlgrrdsttasssavntnipsplmDLNDLISNFAKKGLSAKEMVALSGAHTIGQARCLLFRQRIynetnidsefatslksncpssggddnlssldatsp
GCDASVLlddtssftgeksasanvnsirgFEVIDSVKSEVESLCPGVVSCADILAVAARDSVVAfggpswtvqlgrrdsttasssavntnipsplmDLNDLISNFAKKGLSAKEMVALSGAHTIGQARCLLFRQRIYNETNIDSEFATSLKsncpssggddnlssldatsp
GCDASVLLDDTSSFTGEKSASANVNSIRGFEVIDSVKSEVESLCPGVVSCADILAVAARDSVVAFGGPSWTVQLGRRDsttasssaVNTNIPSPLMDLNDLISNFAKKGLSAKEMVALSGAHTIGQARCLLFRQRIYNETNIDSEFATSLKSNCPssggddnlssldATSP
*************************SIRGFEVIDSVKSEVESLCPGVVSCADILAVAARDSVVAFGGPSWTVQLG*******************LMDLNDLISNFAKKGLSAKEMVALSGAHTIGQARCLLFRQRIYNETNID****************************
GCDASVLLDDTSSFTGEKSASANVNSIRGFEVIDSVKSEVESLCPGVVSCADILAVAARDSVVAFGGPSWTVQLGRRDSTTASSSAVNTNIPSPLMDLNDLISNFAKKGLSAKEMVALSGAHTIGQARCLLFRQRIYNETNIDSEFATSLK***********LSSLDAT**
GCDASVLLDDTSSFTGEKSASANVNSIRGFEVIDSVKSEVESLCPGVVSCADILAVAARDSVVAFGGPSWTVQLGR**********VNTNIPSPLMDLNDLISNFAKKGLSAKEMVALSGAHTIGQARCLLFRQRIYNETNIDSEFATSLKSNCPSSGGDDNLSSLDATSP
*C***VLLDDTSSFTGEKSA*ANVNSIRGFEVIDSVKSEVESLCPGVVSCADILAVAARDSVVAFGGPSWTVQLGRRDSTTASSSAVNTNIPSPLMDLNDLISNFAKKGLSAKEMVALSGAHTIGQARCLLFRQRIYNETNIDSEFATSLKSNCPSS****NL********
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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GCDASVLLDDTSSFTGEKSASANVNSIRGFEVIDSVKSEVESLCPGVVSCADILAVAARDSVVAFGGPSWTVQLGRRDSTTASSSAVNTNIPSPLMDLNDLISNFAKKGLSAKEMVALSGAHTIGQARCLLFRQRIYNETNIDSEFATSLKSNCPSSGGDDNLSSLDATSP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query171 2.2.26 [Sep-21-2011]
P22195316 Cationic peroxidase 1 OS= N/A no 1.0 0.541 0.713 2e-68
A7NY33321 Peroxidase 4 OS=Vitis vin no no 1.0 0.532 0.676 3e-63
Q9FLC0324 Peroxidase 52 OS=Arabidop yes no 0.994 0.524 0.651 6e-61
P00434296 Peroxidase P7 OS=Brassica N/A no 0.994 0.574 0.633 4e-59
A5H452321 Peroxidase 70 OS=Zea mays N/A no 1.0 0.532 0.618 9e-59
A2YPX3314 Peroxidase 2 OS=Oryza sat N/A no 0.970 0.528 0.624 7e-57
Q0D3N0314 Peroxidase 2 OS=Oryza sat no no 0.970 0.528 0.624 7e-57
Q9LVL2316 Peroxidase 67 OS=Arabidop no no 1.0 0.541 0.591 2e-56
Q02200322 Lignin-forming anionic pe N/A no 1.0 0.531 0.610 4e-56
Q9LVL1325 Peroxidase 68 OS=Arabidop no no 1.0 0.526 0.614 4e-56
>sp|P22195|PER1_ARAHY Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2 Back     alignment and function desciption
 Score =  257 bits (657), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 122/171 (71%), Positives = 143/171 (83%)

Query: 1   GCDASVLLDDTSSFTGEKSASANVNSIRGFEVIDSVKSEVESLCPGVVSCADILAVAARD 60
           GCDASVLLDDTS+FTGEK+A  N NSIRGFEVID++KS+VESLCPGVVSCADILAVAARD
Sbjct: 70  GCDASVLLDDTSNFTGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARD 129

Query: 61  SVVAFGGPSWTVQLGRRDSTTASSSAVNTNIPSPLMDLNDLISNFAKKGLSAKEMVALSG 120
           SVVA GG SW V LGRRDSTTAS S+ N+++P+P  +L+ LIS F+ KG + KE+V LSG
Sbjct: 130 SVVALGGASWNVLLGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTKELVTLSG 189

Query: 121 AHTIGQARCLLFRQRIYNETNIDSEFATSLKSNCPSSGGDDNLSSLDATSP 171
           AHTIGQA+C  FR RIYNE+NID  +A SL++NCPS GGD NLS  D T+P
Sbjct: 190 AHTIGQAQCTAFRTRIYNESNIDPTYAKSLQANCPSVGGDTNLSPFDVTTP 240
Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
Arachis hypogaea (taxid: 3818)
EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 7
>sp|A7NY33|PER4_VITVI Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1 Back     alignment and function description
>sp|Q9FLC0|PER52_ARATH Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1 Back     alignment and function description
>sp|P00434|PERP7_BRARA Peroxidase P7 OS=Brassica rapa PE=1 SV=3 Back     alignment and function description
>sp|A5H452|PER70_MAIZE Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1 Back     alignment and function description
>sp|A2YPX3|PER2_ORYSI Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX112 PE=3 SV=2 Back     alignment and function description
>sp|Q0D3N0|PER2_ORYSJ Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PRX112 PE=2 SV=1 Back     alignment and function description
>sp|Q9LVL2|PER67_ARATH Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=2 SV=1 Back     alignment and function description
>sp|Q02200|PERX_NICSY Lignin-forming anionic peroxidase OS=Nicotiana sylvestris PE=2 SV=1 Back     alignment and function description
>sp|Q9LVL1|PER68_ARATH Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query171
224124728 302 predicted protein [Populus trichocarpa] 1.0 0.566 0.771 1e-74
255553371264 Cationic peroxidase 1 precursor, putativ 1.0 0.647 0.773 1e-72
147779780262 hypothetical protein VITISV_022439 [Viti 1.0 0.652 0.754 3e-71
356565910 320 PREDICTED: cationic peroxidase 1-like [G 0.994 0.531 0.758 3e-71
297745791263 unnamed protein product [Vitis vinifera] 1.0 0.650 0.754 4e-71
359478501 325 PREDICTED: cationic peroxidase 1-like [V 1.0 0.526 0.754 4e-71
356551934 323 PREDICTED: cationic peroxidase 1-like [G 0.994 0.526 0.764 4e-71
356499008 333 PREDICTED: cationic peroxidase 1-like [G 0.994 0.510 0.764 5e-71
18072845237 peroxidase [Beta vulgaris] 1.0 0.721 0.719 7e-71
356539684 320 PREDICTED: cationic peroxidase 1-like [G 0.994 0.531 0.752 3e-70
>gi|224124728|ref|XP_002319407.1| predicted protein [Populus trichocarpa] gi|222857783|gb|EEE95330.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  284 bits (726), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 132/171 (77%), Positives = 157/171 (91%)

Query: 1   GCDASVLLDDTSSFTGEKSASANVNSIRGFEVIDSVKSEVESLCPGVVSCADILAVAARD 60
           GCDASVLLDDTSSFTGEK+A  N NS+RG++VID++KS++ES+CPGVVSCADILAVAARD
Sbjct: 56  GCDASVLLDDTSSFTGEKTAGPNANSLRGYDVIDTIKSQLESICPGVVSCADILAVAARD 115

Query: 61  SVVAFGGPSWTVQLGRRDSTTASSSAVNTNIPSPLMDLNDLISNFAKKGLSAKEMVALSG 120
           SVVA  GPSWTVQLGRRDSTTAS  A N+++PSPLMDL+DLI++F+ KG +AKEMVALSG
Sbjct: 116 SVVALSGPSWTVQLGRRDSTTASLGAANSDLPSPLMDLSDLITSFSNKGFTAKEMVALSG 175

Query: 121 AHTIGQARCLLFRQRIYNETNIDSEFATSLKSNCPSSGGDDNLSSLDATSP 171
           +HTIGQARCLLFR R+YNET++DS  ATSLKSNCP++G DD+LSSLDAT+P
Sbjct: 176 SHTIGQARCLLFRNRVYNETSLDSTLATSLKSNCPNTGSDDSLSSLDATTP 226

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255553371|ref|XP_002517727.1| Cationic peroxidase 1 precursor, putative [Ricinus communis] gi|223543125|gb|EEF44659.1| Cationic peroxidase 1 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|147779780|emb|CAN61440.1| hypothetical protein VITISV_022439 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356565910|ref|XP_003551179.1| PREDICTED: cationic peroxidase 1-like [Glycine max] Back     alignment and taxonomy information
>gi|297745791|emb|CBI15847.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359478501|ref|XP_003632123.1| PREDICTED: cationic peroxidase 1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356551934|ref|XP_003544327.1| PREDICTED: cationic peroxidase 1-like [Glycine max] Back     alignment and taxonomy information
>gi|356499008|ref|XP_003518336.1| PREDICTED: cationic peroxidase 1-like [Glycine max] Back     alignment and taxonomy information
>gi|18072845|emb|CAC81821.1| peroxidase [Beta vulgaris] Back     alignment and taxonomy information
>gi|356539684|ref|XP_003538325.1| PREDICTED: cationic peroxidase 1-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query171
TAIR|locus:2153529324 PRX52 "peroxidase 52" [Arabido 0.906 0.478 0.645 1.5e-51
TAIR|locus:2161193325 AT5G58400 [Arabidopsis thalian 0.906 0.476 0.615 3.7e-48
TAIR|locus:2161283316 AT5G58390 [Arabidopsis thalian 0.906 0.490 0.583 1.6e-47
TAIR|locus:2012607321 AT1G14550 [Arabidopsis thalian 0.906 0.482 0.528 1.6e-40
TAIR|locus:2028280346 AT1G44970 [Arabidopsis thalian 0.906 0.447 0.481 2.9e-39
TAIR|locus:2170204335 PA2 "peroxidase 2" [Arabidopsi 1.0 0.510 0.443 1.6e-38
TAIR|locus:2012597315 PER4 "peroxidase 4" [Arabidops 0.906 0.492 0.512 3.4e-38
TAIR|locus:2170214 358 AT5G06730 [Arabidopsis thalian 0.906 0.432 0.481 4.3e-38
TAIR|locus:2012156350 AT1G49570 [Arabidopsis thalian 0.906 0.442 0.481 1.1e-37
TAIR|locus:2115335331 AT4G36430 [Arabidopsis thalian 0.906 0.468 0.469 1.1e-37
TAIR|locus:2153529 PRX52 "peroxidase 52" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
 Identities = 100/155 (64%), Positives = 122/155 (78%)

Query:     1 GCDASVLLDDTSSFTGEKSASANVNSIRGFEVIDSVKSEVESLCPGVVSCADILAVAARD 60
             GCD S+LLDDTSSFTGE++A+ N NS RGF VID++KS VE  CPGVVSCADILA+AARD
Sbjct:    76 GCDGSILLDDTSSFTGEQNAAPNRNSARGFNVIDNIKSAVEKACPGVVSCADILAIAARD 135

Query:    61 SVVAFGGPSWTVQLGRRDXXXXXXXXVNTNIPSPLMDLNDLISNFAKKGLSAKEMVALSG 120
             SVVA GGP+W V++GRRD         N+NIP+P   L+ LIS+F+  GLS ++MVALSG
Sbjct:   136 SVVALGGPNWNVKVGRRDARTASQAAANSNIPAPTSSLSQLISSFSAVGLSTRDMVALSG 195

Query:   121 AHTIGQARCLLFRQRIYNETNIDSEFATSLKSNCP 155
             AHTIGQ+RC  FR RIYNETNI++ FAT+ +  CP
Sbjct:   196 AHTIGQSRCTNFRARIYNETNINAAFATTRQRTCP 230
GO:0004601 "peroxidase activity" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006979 "response to oxidative stress" evidence=IEA
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0005618 "cell wall" evidence=IDA
GO:0048046 "apoplast" evidence=IDA
GO:0005515 "protein binding" evidence=IPI
GO:0005829 "cytosol" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
TAIR|locus:2161193 AT5G58400 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2161283 AT5G58390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2012607 AT1G14550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2028280 AT1G44970 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2170204 PA2 "peroxidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2012597 PER4 "peroxidase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2170214 AT5G06730 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2012156 AT1G49570 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2115335 AT4G36430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.11.1.70.824
3rd Layer1.11.10.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.XIII.180.1
hypothetical protein (302 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query171
cd00693298 cd00693, secretory_peroxidase, Horseradish peroxid 3e-90
pfam00141180 pfam00141, peroxidase, Peroxidase 2e-50
PLN03030324 PLN03030, PLN03030, cationic peroxidase; Provision 3e-42
cd00314255 cd00314, plant_peroxidase_like, Heme-dependent per 1e-16
cd00691253 cd00691, ascorbate_peroxidase, Ascorbate peroxidas 1e-10
cd08201264 cd08201, plant_peroxidase_like_1, Uncharacterized 3e-10
cd00692 328 cd00692, ligninase, Ligninase and other manganese- 2e-07
PLN02364250 PLN02364, PLN02364, L-ascorbate peroxidase 1 3e-06
PLN02608289 PLN02608, PLN02608, L-ascorbate peroxidase 9e-06
PLN02879251 PLN02879, PLN02879, L-ascorbate peroxidase 1e-05
>gnl|CDD|173827 cd00693, secretory_peroxidase, Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information 
 Score =  264 bits (678), Expect = 3e-90
 Identities = 94/178 (52%), Positives = 122/178 (68%), Gaps = 9/178 (5%)

Query: 1   GCDASVLLDDTSSFTGEKSASANVNSIRGFEVIDSVKSEVESLCPGVVSCADILAVAARD 60
           GCDASVLLD T++ T EK A  N  S+RGF+VID +K+ +E+ CPGVVSCADILA+AARD
Sbjct: 48  GCDASVLLDSTANNTSEKDAPPN-LSLRGFDVIDDIKAALEAACPGVVSCADILALAARD 106

Query: 61  SVVAFGGPSWTVQLGRRDSTTASSSAVNTNIPSPLMDLNDLISNFAKKGLSAKEMVALSG 120
           +VV  GGPS+ V LGRRD   +S++ V  N+PSP   ++ LIS FA KGL+  ++VALSG
Sbjct: 107 AVVLAGGPSYEVPLGRRDGRVSSANDVG-NLPSPFFSVSQLISLFASKGLTVTDLVALSG 165

Query: 121 AHTIGQARCLLFRQRIYNETN-------IDSEFATSLKSNCPSSGGDDNLSSLDATSP 171
           AHTIG+A C  F  R+YN +        +D  +A  L+  CP+ G DD L  LD  +P
Sbjct: 166 AHTIGRAHCSSFSDRLYNFSGTGDPDPTLDPAYAAQLRKKCPAGGDDDTLVPLDPGTP 223

Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. Length = 298
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information
>gnl|CDD|215545 PLN03030, PLN03030, cationic peroxidase; Provisional Back     alignment and domain information
>gnl|CDD|173823 cd00314, plant_peroxidase_like, Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>gnl|CDD|173825 cd00691, ascorbate_peroxidase, Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>gnl|CDD|173829 cd08201, plant_peroxidase_like_1, Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>gnl|CDD|173826 cd00692, ligninase, Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>gnl|CDD|166005 PLN02364, PLN02364, L-ascorbate peroxidase 1 Back     alignment and domain information
>gnl|CDD|178218 PLN02608, PLN02608, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|178467 PLN02879, PLN02879, L-ascorbate peroxidase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 171
PLN03030324 cationic peroxidase; Provisional 100.0
cd00693298 secretory_peroxidase Horseradish peroxidase and re 100.0
PF00141230 peroxidase: Peroxidase; InterPro: IPR002016 Peroxi 100.0
PLN02608289 L-ascorbate peroxidase 100.0
PLN02364250 L-ascorbate peroxidase 1 100.0
cd00691253 ascorbate_peroxidase Ascorbate peroxidases and cyt 100.0
PLN02879251 L-ascorbate peroxidase 100.0
cd00692 328 ligninase Ligninase and other manganese-dependent 100.0
cd00314255 plant_peroxidase_like Heme-dependent peroxidases s 100.0
cd08201264 plant_peroxidase_like_1 Uncharacterized family of 100.0
cd00649 409 catalase_peroxidase_1 N-terminal catalytic domain 100.0
TIGR00198 716 cat_per_HPI catalase/peroxidase HPI. Note that the 99.98
PRK15061 726 catalase/hydroperoxidase HPI(I); Provisional 99.96
cd08200297 catalase_peroxidase_2 C-terminal non-catalytic dom 99.92
PRK15061726 catalase/hydroperoxidase HPI(I); Provisional 99.84
TIGR00198716 cat_per_HPI catalase/peroxidase HPI. Note that the 99.84
COG0376 730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.76
COG0376730 KatG Catalase (peroxidase I) [Inorganic ion transp 97.86
>PLN03030 cationic peroxidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1e-56  Score=383.77  Aligned_cols=166  Identities=45%  Similarity=0.814  Sum_probs=153.7

Q ss_pred             CCceeeeccCCCCCcccccccCcCCCchhHHHHHHHHHHHHhhCCCCccHHHHHHHhhcccccccCCCceeecCCCcCCC
Q 039303            1 GCDASVLLDDTSSFTGEKSASANVNSIRGFEVIDSVKSEVESLCPGVVSCADILAVAARDSVVAFGGPSWTVQLGRRDST   80 (171)
Q Consensus         1 GCDaSill~~~~~~~~E~~~~~N~~~~~g~~~i~~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~   80 (171)
                      ||||||||+++   ..|+++++|. +++||++|+.||+++|++||++||||||||||||+||+++|||.|+|++||||+.
T Consensus        71 GCDaSvLl~~~---~~Ek~a~~N~-~l~Gf~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~  146 (324)
T PLN03030         71 GCDASILIDGS---NTEKTALPNL-LLRGYDVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGR  146 (324)
T ss_pred             CCceEEeeCCC---cccccCCCCc-CcchHHHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCC
Confidence            89999999965   3699999997 8999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccCCCCCCCCCCCCHHHHHHHHHHcCCCcccceeecccceeeccccccccccccC--------CCCCCHHHHHHHHh
Q 039303           81 TASSSAVNTNIPSPLMDLNDLISNFAKKGLSAKEMVALSGAHTIGQARCLLFRQRIYN--------ETNIDSEFATSLKS  152 (171)
Q Consensus        81 ~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsGaHtiG~a~c~~f~~r~~~--------dp~~d~~y~~~L~~  152 (171)
                      +|...++. +||.|+.++++|++.|+++||+.+|||+||||||||++||..|.+|+||        ||+||+.|+++||+
T Consensus       147 ~s~~~~~~-~LP~p~~~~~~l~~~F~~~Gl~~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~  225 (324)
T PLN03030        147 VSLASDAS-NLPGFTDSIDVQKQKFAAKGLNTQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQA  225 (324)
T ss_pred             CCCccccc-CCcCCCCCHHHHHHHHHHcCCCHHHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhc
Confidence            98777664 8999999999999999999999999999999999999999999999995        78999999999999


Q ss_pred             cCCCCCCCCCccCCCCCCC
Q 039303          153 NCPSSGGDDNLSSLDATSP  171 (171)
Q Consensus       153 ~Cp~~~~~~~~~~~d~~tp  171 (171)
                      .||..+..+.++.||+.||
T Consensus       226 ~Cp~~~~~~~~~~lD~~Tp  244 (324)
T PLN03030        226 LCPQNGDGSRRIALDTGSS  244 (324)
T ss_pred             cCCCCCCCCccccCCCCCC
Confidence            9996333334678998887

>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions Back     alignment and domain information
>PLN02608 L-ascorbate peroxidase Back     alignment and domain information
>PLN02364 L-ascorbate peroxidase 1 Back     alignment and domain information
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>PLN02879 L-ascorbate peroxidase Back     alignment and domain information
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query171
1sch_A294 Peanut Peroxidase Length = 294 1e-60
1pa2_A306 Arabidopsis Thaliana Peroxidase A2 Length = 306 7e-41
1qgj_A300 Arabidopsis Thaliana Peroxidase N Length = 300 1e-38
4a5g_A308 Raphanus Sativus Anionic Peroxidase. Length = 308 2e-38
3hdl_A304 Crystal Structure Of Highly Glycosylated Peroxidase 1e-36
3atj_A309 Heme Ligand Mutant Of Recombinant Horseradish Perox 2e-36
6atj_A308 Recombinant Horseradish Peroxidase C Complex With F 2e-36
1atj_A306 Recombinant Horseradish Peroxidase C1a Length = 306 2e-36
1kzm_A308 Distal Heme Pocket Mutant (r38s/h42e) Of Recombinan 2e-36
4atj_A309 Distal Heme Pocket Mutant (H42e) Of Recombinant Hor 2e-36
2atj_A308 Recombinant Horseradish Peroxidase Complex With Ben 2e-36
1w4w_A323 Ferric Horseradish Peroxidase C1a In Complex With F 2e-36
1fhf_A304 The Structure Of Soybean Peroxidase Length = 304 2e-36
1gwo_A309 Recombinant Horseradish Peroxidase C1a Ala170gln Le 2e-36
1gwu_A309 Recombinant Horseradish Peroxidase C1a Ala140gly Le 3e-36
1gx2_A309 Recombinant Horseradish Peroxidase Phe209ser Comple 5e-36
2ylj_A306 Horse Radish Peroxidase, Mutant S167y Length = 306 5e-36
1gw2_A308 Recombinant Horseradish Peroxidase C1a Thr171ser In 6e-36
1bgp_A309 Crystal Structure Of Barley Grain Peroxidase 1 Leng 6e-24
1iyn_A295 Crystal Structure Of Chloroplastic Ascorbate Peroxi 4e-07
1stq_A294 Cyrstal Structure Of Cytochrome C Peroxidase Mutant 1e-04
1jci_A294 Stabilization Of The Engineered Cation-Binding Loop 5e-04
1krj_A294 Engineering Calcium-Binding Site Into Cytochrome C 5e-04
1jdr_A294 Crystal Structure Of A Proximal Domain Potassium Bi 5e-04
1sog_A294 Cyrstal Structure Of Cytochrome C Peroxidase Mutant 5e-04
>pdb|1SCH|A Chain A, Peanut Peroxidase Length = 294 Back     alignment and structure 
Iteration: 1

 Score =  228 bits (581), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 106/155 (68%), Positives = 125/155 (80%)
Query: 1   GCDASVLLDDTSSFTGEKSASANVNSIRGFEVIDSVKSEVESLCPGVVSCADILAVAARD 60
           GCDASVLLDDTS+FTGEK+A  N NSIRGFEVID++KS+VESLCPGVVSCADILAVAARD
Sbjct: 48  GCDASVLLDDTSNFTGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARD 107
Query: 61  SVVAFGGPSWTVQLGRRDXXXXXXXXVNTNIPSPLMDLNDLISNFAKKGLSAKEMVALSG 120
           SVVA GG SW V LGRRD         N+++P+P  +L+ LIS F+ KG + KE+V LSG
Sbjct: 108 SVVALGGASWNVLLGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTKELVTLSG 167
Query: 121 AHTIGQARCLLFRQRIYNETNIDSEFATSLKSNCP 155
           AHTIGQA+C  FR RIYNE+NID  +A SL++NCP
Sbjct: 168 AHTIGQAQCTAFRTRIYNESNIDPTYAKSLQANCP 202
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2 Length = 306 Back     alignment and structure
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N Length = 300 Back     alignment and structure
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase. Length = 308 Back     alignment and structure
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree Length = 304 Back     alignment and structure
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Length = 306 Back     alignment and structure
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant Horseradish Peroxidase C (hrp C) Length = 308 Back     alignment and structure
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With Benzhydroxamic Acid Length = 308 Back     alignment and structure
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate Length = 323 Back     alignment and structure
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase Length = 304 Back     alignment and structure
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln Length = 309 Back     alignment and structure
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly Length = 309 Back     alignment and structure
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y Length = 306 Back     alignment and structure
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 Length = 309 Back     alignment and structure
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase From Tobacco Plants And Structural Insights For Its Instability Length = 295 Back     alignment and structure
>pdb|1STQ|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant: Ccpk2m3 Length = 294 Back     alignment and structure
>pdb|1JCI|A Chain A, Stabilization Of The Engineered Cation-Binding Loop In Cytochrome C Peroxidase (Ccp) Length = 294 Back     alignment and structure
>pdb|1KRJ|A Chain A, Engineering Calcium-Binding Site Into Cytochrome C Peroxidase (Ccp) Length = 294 Back     alignment and structure
>pdb|1JDR|A Chain A, Crystal Structure Of A Proximal Domain Potassium Binding Variant Of Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|1SOG|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant: Ccpk2m2 Length = 294 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query171
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 1e-108
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 1e-105
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 1e-105
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 1e-103
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 1e-103
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 2e-99
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 9e-98
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 1e-57
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 1e-39
3fmu_A 331 VersatIle peroxidase VPL2; class II (fungal) perox 6e-39
2e39_A 344 Peroxidase; heme protein, coordination geometry of 5e-36
3q3u_A 338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 6e-35
3m5q_A 357 Manganese peroxidase 1; heme, Mn(II)-binding site, 8e-35
1llp_A 343 LIP4.15, lignin peroxidase; heme protein, glyco pr 3e-34
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 2e-16
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 3e-14
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 9e-06
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Length = 294 Back     alignment and structure
 Score =  311 bits (798), Expect = e-108
 Identities = 122/171 (71%), Positives = 143/171 (83%)

Query: 1   GCDASVLLDDTSSFTGEKSASANVNSIRGFEVIDSVKSEVESLCPGVVSCADILAVAARD 60
           GCDASVLLDDTS+FTGEK+A  N NSIRGFEVID++KS+VESLCPGVVSCADILAVAARD
Sbjct: 48  GCDASVLLDDTSNFTGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARD 107

Query: 61  SVVAFGGPSWTVQLGRRDSTTASSSAVNTNIPSPLMDLNDLISNFAKKGLSAKEMVALSG 120
           SVVA GG SW V LGRRDSTTAS S+ N+++P+P  +L+ LIS F+ KG + KE+V LSG
Sbjct: 108 SVVALGGASWNVLLGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTKELVTLSG 167

Query: 121 AHTIGQARCLLFRQRIYNETNIDSEFATSLKSNCPSSGGDDNLSSLDATSP 171
           AHTIGQA+C  FR RIYNE+NID  +A SL++NCPS GGD NLS  D T+P
Sbjct: 168 AHTIGQAQCTAFRTRIYNESNIDPTYAKSLQANCPSVGGDTNLSPFDVTTP 218
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Length = 306 Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Length = 304 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Length = 309 Back     alignment and structure
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} Length = 304 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Length = 300 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Length = 309 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Length = 295 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Length = 261 Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* Length = 331 Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Length = 344 Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} Length = 338 Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Length = 357 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Length = 343 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* Length = 271 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} PDB: 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* 1mk8_A* 1mkq_A* ... Length = 294 Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Length = 268 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query171
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 100.0
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 100.0
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 100.0
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 100.0
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 100.0
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 100.0
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 100.0
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 100.0
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 100.0
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 100.0
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 100.0
3m5q_A 357 Manganese peroxidase 1; heme, Mn(II)-binding site, 100.0
2cca_A 740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
1ub2_A 720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
3ut2_A 764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
3fmu_A 331 VersatIle peroxidase VPL2; class II (fungal) perox 100.0
3n3r_A 748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
2e39_A 344 Peroxidase; heme protein, coordination geometry of 100.0
3vli_A 737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
1itk_A 731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
3q3u_A 338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 100.0
1llp_A 343 LIP4.15, lignin peroxidase; heme protein, glyco pr 100.0
1u2k_A309 Peroxidase/catalase HPI; KATG, catalase-peroxidase 100.0
2cca_A740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
3vli_A737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
1itk_A731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
3n3r_A748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
1ub2_A720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 99.98
3ut2_A764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 99.98
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 99.98
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} SCOP: a.93.1.0 Back     alignment and structure
Probab=100.00  E-value=1.1e-60  Score=405.32  Aligned_cols=171  Identities=50%  Similarity=0.791  Sum_probs=161.8

Q ss_pred             CCceeeeccCCCCCcccccccCcCCCchhHHHHHHHHHHHHhhCCCCccHHHHHHHhhcccccccCCCceeecCCCcCCC
Q 039303            1 GCDASVLLDDTSSFTGEKSASANVNSIRGFEVIDSVKSEVESLCPGVVSCADILAVAARDSVVAFGGPSWTVQLGRRDST   80 (171)
Q Consensus         1 GCDaSill~~~~~~~~E~~~~~N~~~~~g~~~i~~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~   80 (171)
                      ||||||||++++++.+|+++++|.+++|||++|+.||++||++||++|||||||+||||+||+++|||.|+|++||+|+.
T Consensus        48 GCDgSiLld~t~~~~~Ek~~~~N~~~lrgf~vid~iK~~le~~Cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~  127 (304)
T 3hdl_A           48 GCDASVLLDSTANNTAEKDAIPNNPSLRGFEVITAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPSGRRDGT  127 (304)
T ss_dssp             SSSSGGGCCCBTTBCCGGGSTTTTTTCCCHHHHHHHHHHHHHHSTTTSCHHHHHHHHHHHHHHHHHCCCCCCEECCCBCS
T ss_pred             CCCeeeeecCCCCCcccccCCCcccchHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHhhhhhccCCCccccccCccCCC
Confidence            89999999998888899999999878899999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccCCCCCCCCCCCCHHHHHHHHHHcCCCcccceeecccceeeccccccccccccC-------CCCCCHHHHHHHHhc
Q 039303           81 TASSSAVNTNIPSPLMDLNDLISNFAKKGLSAKEMVALSGAHTIGQARCLLFRQRIYN-------ETNIDSEFATSLKSN  153 (171)
Q Consensus        81 ~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsGaHtiG~a~c~~f~~r~~~-------dp~~d~~y~~~L~~~  153 (171)
                      +++..+++++||.|+.++++|++.|++|||+.+||||||||||||++||..|.+|+|+       ||++|+.|++.||..
T Consensus       128 ~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~d~VaLsGaHTiG~ahC~~f~~Rly~f~~~~~~DP~ld~~~a~~L~~~  207 (304)
T 3hdl_A          128 VSLASEANAQIPSPLFNATQLINSFANKTLTADEMVTLSGAHSIGVAHCSSFTNRLYNFNSGSGIDPTLSPSYAALLRNT  207 (304)
T ss_dssp             CCCHHHHHHHSCCTTCCHHHHHHHHHTTTCCHHHHHHHGGGGGSSEEEGGGTGGGTSSCSSSSSSCTTSCHHHHHHHHHH
T ss_pred             CCCccccccCCCCCCCCHHHHHHHHHHcCCCHHHhhhhhccccccccccchhhhhhcccCCCCCCCCcccHHHHHHHhcc
Confidence            9987777778999999999999999999999999999999999999999999999986       899999999999999


Q ss_pred             CCCCCC--CCCccCCCCCCC
Q 039303          154 CPSSGG--DDNLSSLDATSP  171 (171)
Q Consensus       154 Cp~~~~--~~~~~~~d~~tp  171 (171)
                      ||..++  +.++++||+.||
T Consensus       208 Cp~~~~~~~~~~~~lD~~TP  227 (304)
T 3hdl_A          208 CPANSTRFTPITVSLDIITP  227 (304)
T ss_dssp             SCTTCCTTSCCEEESCSSST
T ss_pred             CCCCCCCCCccccCCCCCCc
Confidence            997655  556778998887
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* 4ged_A* Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} SCOP: a.93.1.1 PDB: 4a71_A* 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 4a6z_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* ... Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* 4fcn_A* 4g05_A* 4fcs_A* 4fef_A* 4fdq_A* Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} SCOP: a.93.1.0 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Back     alignment and structure
>1u2k_A Peroxidase/catalase HPI; KATG, catalase-peroxidase, C-terminal domain, oxidoreductase; 2.00A {Escherichia coli} SCOP: a.93.1.3 PDB: 1u2l_A 1u2j_A Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 171
d1fhfa_304 a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine m 1e-59
d1scha_294 a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hy 1e-59
d1pa2a_306 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 9e-59
d1qgja_300 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 8e-55
d1gwua_307 a.93.1.1 (A:) Plant peroxidase {Horseradish (Armor 2e-53
d1bgpa_309 a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vu 4e-51
d1llpa_ 343 a.93.1.1 (A:) Fungal peroxidase (ligninase) {White 8e-31
d1yyda1 357 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) { 1e-30
d2e39a1 336 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) { 1e-29
d1iyna_275 a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco 3e-25
d2euta1291 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {B 1e-20
d1oafa_250 a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glyci 1e-20
d1mwva1 406 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burk 0.002
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 304 Back     information, alignment and structure

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

 Score =  185 bits (471), Expect = 1e-59
 Identities = 80/178 (44%), Positives = 118/178 (66%), Gaps = 7/178 (3%)

Query: 1   GCDASVLLDDTSSFTGEKSASANVNSIRGFEVIDSVKSEVESLCPGVVSCADILAVAARD 60
           GCD SVLL++T +   E+ A  N+NSIRG +V++ +K+ VE+ CP  VSCADILA+AA  
Sbjct: 48  GCDGSVLLNNTDTIESEQDALPNINSIRGLDVVNDIKTAVENSCPDTVSCADILAIAAEI 107

Query: 61  SVVAFGGPSWTVQLGRRDSTTASSSAVNTNIPSPLMDLNDLISNFAKKGLSAKEMVALSG 120
           + V  GGP W V LGRRDS TA+ +  N N+P+P  +L  L ++FA +GL+  ++V LSG
Sbjct: 108 ASVLGGGPGWPVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTLDLVTLSG 167

Query: 121 AHTIGQARCLLFRQRIYNETN-------IDSEFATSLKSNCPSSGGDDNLSSLDATSP 171
            HT G+ARC  F  R+YN +N       +++ +   L++ CP +   DNL++LD ++P
Sbjct: 168 GHTFGRARCSTFINRLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNLTNLDLSTP 225
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 294 Back     information, alignment and structure
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Length = 306 Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Length = 300 Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Length = 307 Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Length = 309 Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 343 Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 357 Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Length = 336 Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 275 Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 291 Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 250 Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Length = 406 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query171
d1fhfa_304 Plant peroxidase {Soybean (Glycine max) [TaxId: 38 100.0
d1pa2a_306 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1qgja_300 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1gwua_307 Plant peroxidase {Horseradish (Armoracia rusticana 100.0
d1scha_294 Plant peroxidase {Peanut (Arachis hypogaea) [TaxId 100.0
d1bgpa_309 Plant peroxidase {Barley (Hordeum vulgare), peroxi 100.0
d1iyna_275 Ascorbate peroxidase {Common tobacco (Nicotiana ta 100.0
d1yyda1 357 Fungal peroxidase (ligninase) {Basidomycetos fungu 100.0
d1oafa_250 Ascorbate peroxidase {Soybean (Glycine max) [TaxId 100.0
d2e39a1 336 Fungal peroxidase (ligninase) {Arthromyces ramosus 100.0
d2euta1291 Cytochrome c peroxidase, CCP {Baker's yeast (Sacch 100.0
d1llpa_ 343 Fungal peroxidase (ligninase) {White rot basidiomy 100.0
d1mwva2308 Catalase-peroxidase KatG {Burkholderia pseudomalle 99.9
d1mwva1406 Catalase-peroxidase KatG {Burkholderia pseudomalle 99.88
d1itka1406 Catalase-peroxidase KatG {Archaeon Haloarcula mari 99.87
d1u2ka_292 Catalase-peroxidase KatG {Burkholderia pseudomalle 99.86
d2ccaa2285 Catalase-peroxidase KatG {Mycobacterium tuberculos 99.86
d1itka2308 Catalase-peroxidase KatG {Archaeon Haloarcula mari 99.84
d2ccaa1410 Catalase-peroxidase KatG {Mycobacterium tuberculos 99.84
d1ub2a1 406 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 99.83
d1ub2a2294 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 99.83
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=2e-56  Score=377.54  Aligned_cols=171  Identities=46%  Similarity=0.875  Sum_probs=161.1

Q ss_pred             CCceeeeccCCCCCcccccccCcCCCchhHHHHHHHHHHHHhhCCCCccHHHHHHHhhcccccccCCCceeecCCCcCCC
Q 039303            1 GCDASVLLDDTSSFTGEKSASANVNSIRGFEVIDSVKSEVESLCPGVVSCADILAVAARDSVVAFGGPSWTVQLGRRDST   80 (171)
Q Consensus         1 GCDaSill~~~~~~~~E~~~~~N~~~~~g~~~i~~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~   80 (171)
                      ||||||||+++.++.+|+++++|.++++||++|+.||++||++||++|||||||+||||+||+++|||.|+|++||+|+.
T Consensus        48 GCDgSill~~~~~~~~E~~~~~N~~~~~g~~~id~iK~~le~~cp~~VScADIlalAardAv~~~GGP~~~v~~GR~D~~  127 (304)
T d1fhfa_          48 GCDGSVLLNNTDTIESEQDALPNINSIRGLDVVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPLGRRDSL  127 (304)
T ss_dssp             CSSSGGGCCCCSSCCCGGGSTTTTTTCCCHHHHHHHHHHHHTTSTTTSCHHHHHHHHHHHHHHTTTCCCCCCCBCCCBCS
T ss_pred             CCCeeEeecCCCCccccccCCcccccchhHHHHHHHHHHHHhhCCCccCHHHHHHHHHhhhhhhcCCCcccccCCCcCcC
Confidence            89999999998888999999999988899999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccCCCCCCCCCCCCHHHHHHHHHHcCCCcccceeecccceeeccccccccccccC-------CCCCCHHHHHHHHhc
Q 039303           81 TASSSAVNTNIPSPLMDLNDLISNFAKKGLSAKEMVALSGAHTIGQARCLLFRQRIYN-------ETNIDSEFATSLKSN  153 (171)
Q Consensus        81 ~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsGaHtiG~a~c~~f~~r~~~-------dp~~d~~y~~~L~~~  153 (171)
                      .++..++..+||.|+.++++|+++|++|||+.+|||||+||||||++||..|..|+|+       ||.+|+.|...|+..
T Consensus       128 ~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~d~VaLsGaHTiG~ahc~~~~~rl~~~~~~~~~d~~~~~~~~~~L~~~  207 (304)
T d1fhfa_         128 TANRTLANQNLPAPFFNLTQLKASFAVQGLNTLDLVTLSGGHTFGRARCSTFINRLYNFSNTGNPDPTLNTTYLEVLRAR  207 (304)
T ss_dssp             CCCHHHHHHHSCCTTCCHHHHHHHHHHTTCCHHHHHHHGGGGGSCEEEGGGTGGGTSCGGGSSSCCTTSCHHHHHHHHHH
T ss_pred             ccccccccccCCCCCCCHHHHHHHHHHcCCCHHHHHHHhhhhhhcccccccccccccCCCCCCCCCcccCHHHHHHHHHh
Confidence            9987777778999999999999999999999999999999999999999999999985       679999999999999


Q ss_pred             CCCCCCCCCccCCCCCCC
Q 039303          154 CPSSGGDDNLSSLDATSP  171 (171)
Q Consensus       154 Cp~~~~~~~~~~~d~~tp  171 (171)
                      ||..+...+.+.+|..||
T Consensus       208 c~~~~~~~~~~~~d~~tp  225 (304)
T d1fhfa_         208 CPQNATGDNLTNLDLSTP  225 (304)
T ss_dssp             SCSSCSSCCEEESCSSST
T ss_pred             cCCCCCCCcccccCCCCC
Confidence            997655556777888776
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure