Citrus Sinensis ID: 039395

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------33
MATKTFIIILFIYMFSTSRAQTPQSNITTGSTLYTNSSPNFWPSPSGHFAFGFYPTGNGFKAGIWLIGSGPANDIIDVWTARRTDPVVSSGAALQFSVDGSRVLLRNSNGEVQLIAEPTRTAVAAAMLDSGNFVLCDSSSQTVWASFDHPTDTLLVSQKLAKDSELYSSMSLTNQSIGNFKLLMQSDGNLNAFPLRSIQDGKYGYWSSYTSGAGHNVTLNLDQYGILYLGNSTGFIVKNLTDGRPSVNGTTLLYQHQIGTSGSFSSKILWVAIVDEDRCVVKGACGLNSYCSLNGTGIACFCPPGFIYIDPEKPQEGCKLNSTIEDCLE
cccHHHHHHHHHHHHHcccccccccccccccEEEEcccccEEEccccEEEEEEEcccccEEEEEEcccccccccccEEEEccccccccccccEEEEEEcccEEEEEccccEEEEEccccccccEEEEEccccEEEEcccccEEEEcccccccccccccccccccEEEEccccccccccEEEEEEEcccccEEEEcccccccEEEccccccccccccEEEEEEEEEEEEEccccEEEEEEcccccEEEEcEEEEEEEEEcccccccccEEEEEEcccccccccccccccccccccccccccccccccEEccccccccccEEccccccccc
cccHHHHHHHHHHHHHHccccEEEccccccccEEEEccccEEEccccEEEEEEEcccccEEEEEEEcccccccccEEEEEEccccccccccEEEEEEccccEEEEcccccEEEEccccccccEEEEEcccccEEEEcccccEEEEEccccccccccccccccccEEEEcccccccccccEEEEEcccccccEEEEEEccccccccEEEEEccccccEEEEccccccccccccccEEEEEEEccccEEEEEEEEEcccEEEccEEEEEEEEcccccccccccHHccccccEEcccccccccccccccccccHHHHccccEEccccccccc
MATKTFIIILFIYMFstsraqtpqsnittgstlytnsspnfwpspsghfafgfyptgngfkAGIWLigsgpandiidvwtarrtdpvvssgaalqfsvdgsrvllrnsngevqliaEPTRTAVAAAMLDSgnfvlcdsssqtvwasfdhptdtLLVSQKLAKDSELYSSMSLTNQSIGNFKLLmqsdgnlnafplrsiqdgkygywssytsgaghnvtlnldQYGILYLGNSTGFIVknltdgrpsvngttllyqhqigtsgsfsSKILWVAIVdedrcvvkgacglnsycslngtgiacfcppgfiyidpekpqegcklnstiedcle
MATKTFIIILFIYMFSTSRAQTPQSNITTGSTLYTNSSPNFWPSPSGHFAFGFYPTGNGFKAGIWLIGSGPANDIIDVWTARRTDPVVSSGAALQFSVDGSRVLLRNSNGEVQLIAEPTRTAVAAAMLDSGNFVLCDSSSQTVWASFDHPTDTLLVSQKLAKDSELYSSMSLTNQSIGNFKLLMQSDGNLNAFPLRSIQDGKYGYWSSYTSGAGHNVTLNLDQYGILYLGNSTGFIVKNLTDGRPSVNGTTLLYQHQIGTSGSFSSKILWVAIVDEDRCVVKGACGLNSYCSLNGTGIACFCPPGFIYIDPEKPQEGCKLNSTIEDCLE
MATKTFIIILFIYMFSTSRAQTPQSNITTGSTLYTNSSPNFWPSPSGHFAFGFYPTGNGFKAGIWLIGSGPANDIIDVWTARRTDPVVSSGAALQFSVDGSRVLLRNSNGEVQLIAEPTRTAVAAAMLDSGNFVLCDSSSQTVWASFDHPTDTLLVSQKLAKDSELYSSMSLTNQSIGNFKLLMQSDGNLNAFPLRSIQDGKYGYWSSYTSGAGHNVTLNLDQYGILYLGNSTGFIVKNLTDGRPSVNGTTLLYQHQIGTSGSFSSKILWVAIVDEDRCVVKGACGLNSYCSLNGTGIACFCPPGFIYIDPEKPQEGCKLNSTIEDCLE
****TFIIILFIYMFSTS*************TLYTN**PNFWPSPSGHFAFGFYPTGNGFKAGIWLIGSGPANDIIDVWTARRTDPVVSSGAALQFSVDGSRVLLRNSNGEVQLIAEPTRTAVAAAMLDSGNFVLCDSSSQTVWASFDHPTDTLLVSQKLA****LY***SLTNQSIGNFKLLMQSDGNLNAFPLRSIQDGKYGYWSSYTSGAGHNVTLNLDQYGILYLGNSTGFIVKNLTDGRPSVNGTTLLYQHQIGTSGSFSSKILWVAIVDEDRCVVKGACGLNSYCSLNGTGIACFCPPGFIYID*******************
*ATKTFIIILFIYMFSTSRAQTPQSNI***************PSPSGHFAFGFYPTGNGFKAGIWLIGSGPANDIIDVWTARRTDPVVSSGAALQFSVDGSRVLLRNSNGEVQLIAEPTRTAVAAAMLDSGNFVLCDSSSQTVWASFDHPTDTLLVSQKLAKDSELYSSMSLTNQSIGNFKLLMQSDGNLNAFPLRSIQDGKYGYWSSYTSGAGHNVTLNLDQYGILYLGNSTGFIVKNLTDGRPSVNGTTLLYQHQIGTSGSFSSKILWVAIVDEDRCVVKGACGLNSYCSLNGTGIACFCPPGFIYIDPEKPQEGCKLNSTIE****
MATKTFIIILFIYMFSTSRAQTPQSNITTGSTLYTNSSPNFWPSPSGHFAFGFYPTGNGFKAGIWLIGSGPANDIIDVWTARRTDPVVSSGAALQFSVDGSRVLLRNSNGEVQLIAEPTRTAVAAAMLDSGNFVLCDSSSQTVWASFDHPTDTLLVSQKLAKDSELYSSMSLTNQSIGNFKLLMQSDGNLNAFPLRSIQDGKYGYWSSYTSGAGHNVTLNLDQYGILYLGNSTGFIVKNLTDGRPSVNGTTLLYQHQIGTSGSFSSKILWVAIVDEDRCVVKGACGLNSYCSLNGTGIACFCPPGFIYIDPEKPQEGCKLNSTIEDCLE
*ATKTFIIILFIYMFSTSRAQTPQSNITTGSTLYTNSSPNFWPSPSGHFAFGFYPTGNGFKAGIWLIGSGPANDIIDVWTARRTDPVVSSGAALQFSVDGSRVLLRNSNGEVQLIAEPTRTAVAAAMLDSGNFVLCDSSSQTVWASFDHPTDTLLVSQKLAKDSELYSSMSLTNQSIGNFKLLMQSDGNLNAFPLRSIQDGKYGYWSSYTSGAGHNVTLNLDQYGILYLGNSTGFIVKNLTDGRPSVNGTTLLYQHQIGTSGSFSSKILWVAIVDEDRCVVKGACGLNSYCSLNGTGIACFCPPGFIYIDPEKPQEGCKLNSTI**C**
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MATKTFIIILFIYMFSTSRAQTPQSNITTGSTLYTNSSPNFWPSPSGHFAFGFYPTGNGFKAGIWLIGSGPANDIIDVWTARRTDPVVSSGAALQFSVDGSRVLLRNSNGEVQLIAEPTRTAVAAAMLDSGNFVLCDSSSQTVWASFDHPTDTLLVSQKLAKDSELYSSMSLTNQSIGNFKLLMQSDGNLNAFPLRSIQDGKYGYWSSYTSGAGHNVTLNLDQYGILYLGNSTGFIVKNLTDGRPSVNGTTLLYQHQIGTSGSFSSKILWVAIVDEDRCVVKGACGLNSYCSLNGTGIACFCPPGFIYIDPEKPQEGCKLNSTIEDCLE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query329 2.2.26 [Sep-21-2011]
Q39202 832 G-type lectin S-receptor- yes no 0.933 0.368 0.267 8e-19
Q9XID3 829 G-type lectin S-receptor- no no 0.835 0.331 0.289 1e-17
Q9FLV4 872 G-type lectin S-receptor- no no 0.920 0.347 0.281 8e-16
P0DH86 853 G-type lectin S-receptor- no no 0.762 0.294 0.286 5e-14
P17801 817 Putative receptor protein N/A no 0.911 0.367 0.285 5e-14
P0DH87 546 Putative inactive G-type no no 0.762 0.459 0.284 6e-14
Q9LPZ3 845 G-type lectin S-receptor- no no 0.781 0.304 0.263 7e-14
O81905 850 Receptor-like serine/thre no no 0.838 0.324 0.276 1e-13
P22551444 S-locus-specific glycopro N/A no 0.841 0.623 0.284 2e-13
P22552444 S-locus-specific glycopro N/A no 0.841 0.623 0.275 4e-13
>sp|Q39202|RLK1_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS=Arabidopsis thaliana GN=RLK1 PE=2 SV=2 Back     alignment and function desciption
 Score = 94.7 bits (234), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 148/362 (40%), Gaps = 55/362 (15%)

Query: 6   FIIILFIYMFSTSRAQTPQSNITTGSTLYTNSSPNF---WPSPSGHFAFGFYPT--GNGF 60
            ++IL +  F          ++  G +L  + S      W SPSG FAFGF      +GF
Sbjct: 11  LVLILQLQTFFVFSQNIRNGSVPVGESLTASESQQISSSWRSPSGDFAFGFRKIQPNDGF 70

Query: 61  KAGIWLIGSGPANDIIDVWTARR---TDPVVSSGAALQFSVDGSRVLLRNSNGEVQLIAE 117
              IW       +D   VW A+    T  +V +G+ +  + DG  V+  +  G+    A 
Sbjct: 71  TLSIWF---DKISDKTIVWHAQAVNTTTGLVPNGSKVTLTADGGLVIA-DPRGQELWRAL 126

Query: 118 PTRTAVAAAMLDSGNFVL----CDSSSQTVWASFDHPTDTLLVSQKLAKDSELYSSMSLT 173
              +       D GNFVL     + S + +W+SF++PTDTLL +Q +     L S  + T
Sbjct: 127 SGGSVSRGRFTDDGNFVLFRDGSEDSDEVLWSSFENPTDTLLPNQNIEVGRNLSSRRTET 186

Query: 174 NQSIGNFKLLMQSDGNLNAFPLRSIQDGKYGYWSSYTSGAGHN-----VTLNLDQYGILY 228
           +   G F L ++ DGNL    L +    +   +S Y     ++     + L  +Q G +Y
Sbjct: 187 SFKKGRFSLRLEDDGNLQLHSLNAETASESDIYSQYYESNTNDPNNPGIQLVFNQSGEIY 246

Query: 229 L--GNSTGFIVKNLTDGRPSVNGTTLLYQHQIGTSGSFSSKILWVAIVDEDRCVVKG--- 283
           +   N++ F+VK   D  P  +     Y      S  F   +L   I  E R +V G   
Sbjct: 247 VLQRNNSRFVVK---DRDPDFSIAAPFY-----ISTGF---LLSTIIPKEARRIVGGCLL 295

Query: 284 -----------------ACGLNSYCSL-NGTGIACFCPPGFIYIDPEKPQEGCKLNSTIE 325
                            ACG N+ CSL N     C CP  F+  DP      C  +  ++
Sbjct: 296 GLCRDNMCSPDDALGNMACGYNNICSLGNNKRPKCECPERFVLKDPSNEYGDCLPDFEMQ 355

Query: 326 DC 327
            C
Sbjct: 356 TC 357

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1
>sp|Q9XID3|Y1343_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 OS=Arabidopsis thaliana GN=At1g34300 PE=1 SV=1 Back     alignment and function description
>sp|Q9FLV4|Y5248_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 OS=Arabidopsis thaliana GN=At5g24080 PE=2 SV=1 Back     alignment and function description
>sp|P0DH86|SRK_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SRK OS=Arabidopsis thaliana GN=SRK PE=2 SV=1 Back     alignment and function description
>sp|P17801|KPRO_MAIZE Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2 Back     alignment and function description
>sp|P0DH87|PSRK_ARATH Putative inactive G-type lectin S-receptor-like serine/threonine-protein kinase SRK OS=Arabidopsis thaliana GN=PSEUDOSRKA PE=5 SV=1 Back     alignment and function description
>sp|Q9LPZ3|Y1141_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410 OS=Arabidopsis thaliana GN=At1g11410 PE=3 SV=3 Back     alignment and function description
>sp|O81905|SD18_ARATH Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana GN=SD18 PE=1 SV=1 Back     alignment and function description
>sp|P22551|SLSG0_BRAOA S-locus-specific glycoprotein OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1 Back     alignment and function description
>sp|P22552|SLSG1_BRAOA S-locus-specific glycoprotein BS29-1 OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query329
255585429 787 serine-threonine protein kinase, plant-t 0.951 0.397 0.555 5e-97
225431549 772 PREDICTED: G-type lectin S-receptor-like 0.902 0.384 0.459 9e-62
147838246 760 hypothetical protein VITISV_031648 [Viti 0.902 0.390 0.453 1e-60
255582003 817 ATP binding protein, putative [Ricinus c 0.963 0.388 0.423 8e-60
255582007 783 ATP binding protein, putative [Ricinus c 0.957 0.402 0.419 3e-59
255584574 1031 conserved hypothetical protein [Ricinus 0.927 0.295 0.413 1e-55
359477040 774 PREDICTED: G-type lectin S-receptor-like 0.902 0.383 0.446 1e-55
356546166 810 PREDICTED: G-type lectin S-receptor-like 0.960 0.390 0.401 9e-55
224105689 495 predicted protein [Populus trichocarpa] 0.927 0.616 0.406 2e-54
147857244 718 hypothetical protein VITISV_039750 [Viti 0.902 0.413 0.440 1e-53
>gi|255585429|ref|XP_002533409.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223526754|gb|EEF28982.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  360 bits (924), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 185/333 (55%), Positives = 238/333 (71%), Gaps = 20/333 (6%)

Query: 4   KTFIIILFIYMFSTSRAQTPQSNITTGSTLYTNSSPNFWPSPSGHFAFGFYPTGNGFKAG 63
           KTFI+ LF+++ S ++AQ    N+T GS LYTNS+PNFWP+ SG FAFGFYP+GNGF+ G
Sbjct: 3   KTFIL-LFVFLVSLTKAQP--RNVTRGSILYTNSTPNFWPTYSGLFAFGFYPSGNGFRVG 59

Query: 64  IWLIGSGPANDIIDVWTARRTDPVVSSGAALQFSVDGSRVLLRNSNGEVQLIAEPTRTAV 123
           IWL G+     I  VWTA+R DP V  GAAL FS DG R+LLR+S GEV +     + A+
Sbjct: 60  IWLSGNP---KITVVWTAQRNDPPVLPGAALIFSSDG-RLLLRSSTGEVNIAVTGDQRAL 115

Query: 124 AAAMLDSGNFVLCDSSSQTVWASFDHPTDTLLVSQKLAKDSELYSSMSLTNQSIGNFKLL 183
            A++ +SGN VL DSSS+ +W SFDHPT+TLLV Q LA+ + LYSS S T+ S+GNFKL 
Sbjct: 116 VASIYNSGNLVLYDSSSEIIWESFDHPTNTLLVKQVLARYNYLYSSKSDTDDSVGNFKLA 175

Query: 184 MQSDGNLNAFPLRSIQDGKYGYWSSYTSGAGHNVTLNLDQYGILYLGNSTGFIVKNLTDG 243
           MQ DGNL A+P+RS+Q+GKY YWSS+T+  G+NV+L+LD  G LYL N TGF +KNLT+G
Sbjct: 176 MQGDGNLVAYPMRSLQEGKYAYWSSFTTRPGNNVSLSLDVDGRLYLKNLTGFPIKNLTEG 235

Query: 244 RPSVN-------------GTTLLYQHQIGTSGSFSSKILWVAIVDEDRCVVKGACGLNSY 290
              VN             G   LYQH +G +GSF+S  LW AI +++RC VKG CG NSY
Sbjct: 236 GLLVNDANILYRATFDIDGILRLYQHHLGINGSFNSTKLWSAITEDERCSVKGTCGPNSY 295

Query: 291 CSLNGTGIACFCPPGFIYIDPEKPQEGCKLNST 323
           C++NG  IAC CPP F ++DP +P +GCKL+S+
Sbjct: 296 CAINGRDIACLCPPEFDFLDPNQPSKGCKLSSS 328

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225431549|ref|XP_002275592.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|147838246|emb|CAN72121.1| hypothetical protein VITISV_031648 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255582003|ref|XP_002531799.1| ATP binding protein, putative [Ricinus communis] gi|223528565|gb|EEF30587.1| ATP binding protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255582007|ref|XP_002531801.1| ATP binding protein, putative [Ricinus communis] gi|223528567|gb|EEF30589.1| ATP binding protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255584574|ref|XP_002533013.1| conserved hypothetical protein [Ricinus communis] gi|223527202|gb|EEF29367.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|359477040|ref|XP_002275651.2| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356546166|ref|XP_003541502.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like [Glycine max] Back     alignment and taxonomy information
>gi|224105689|ref|XP_002333783.1| predicted protein [Populus trichocarpa] gi|222838484|gb|EEE76849.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147857244|emb|CAN79206.1| hypothetical protein VITISV_039750 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query329
TAIR|locus:2026155 829 AT1G34300 [Arabidopsis thalian 0.905 0.359 0.303 7.3e-23
TAIR|locus:2141181 850 RK3 "receptor kinase 3" [Arabi 0.896 0.347 0.288 1.2e-16
TAIR|locus:2088619439 AT3G12000 [Arabidopsis thalian 0.951 0.712 0.278 1.1e-14
TAIR|locus:2018546 843 RK1 "receptor kinase 1" [Arabi 0.860 0.335 0.299 1.3e-14
TAIR|locus:2054326 764 AT2G41890 [Arabidopsis thalian 0.857 0.369 0.278 7.8e-14
TAIR|locus:2018506 847 RK2 "receptor kinase 2" [Arabi 0.857 0.332 0.306 2.7e-13
TAIR|locus:2197734 814 AT1G61370 [Arabidopsis thalian 0.914 0.369 0.254 3.8e-12
TAIR|locus:2197744 807 AT1G61420 [Arabidopsis thalian 0.844 0.344 0.275 4.9e-12
UNIPROTKB|Q39688389 EP1 "Epidermis-specific secret 0.544 0.460 0.335 7.7e-12
TAIR|locus:2037508441 AT1G78850 [Arabidopsis thalian 0.544 0.405 0.321 5.3e-11
TAIR|locus:2026155 AT1G34300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 275 (101.9 bits), Expect = 7.3e-23, P = 7.3e-23
 Identities = 105/346 (30%), Positives = 152/346 (43%)

Query:     1 MATKTFIIILFIYMFSTSRAQTPQSNITTGSTLYTNSSPNFWPSPSGHFAFGFYPTG--N 58
             MA KT  + L   +          S I  GS +Y + S   WPSP+  F+  F P+   N
Sbjct:     1 MAVKTPFLKLLPLLLLLLHFPFSFSTIPLGSVIYASGSNQNWPSPNSTFSVSFVPSPSPN 60

Query:    59 GFKAGIWLIGSGPANDIIDVWTARRTDPVVSSGAALQFSVDGSRVLLRNSNGEVQLIAEP 118
              F A +   GS P      +W+A   D    S  +L+    GS + L N +G     ++ 
Sbjct:    61 SFLAAVSFAGSVP------IWSAGTVD----SRGSLRLHTSGS-LRLTNGSGTTVWDSKT 109

Query:   119 TRTAVAAAML-DSGNFVLCDSSSQTVWASFDHPTDTLLVSQKLAKD----SELYS----- 168
              R  V +  + D+G F+L ++ S  VW+SFD+PTDT++ SQ         S LYS     
Sbjct:   110 DRLGVTSGSIEDTGEFILLNNRSVPVWSSFDNPTDTIVQSQNFTAGKILRSGLYSFQLER 169

Query:   169 SMSLT---NQSI--GNFKLLMQSDGNLNAFPLRSIQ-DGKYGYWSSYTSGAGHNVTLNLD 222
             S +LT   N S    N  L      NL++ P  S+Q +G    + S   G G  +  + D
Sbjct:   170 SGNLTLRWNTSAIYWNHGLNSSFSSNLSS-PRLSLQTNGVVSIFESNLLG-GAEIVYSGD 227

Query:   223 QYGILYLGNSTGFIVKNLTDGRPSVNGTTLLYQHQIGTSGSFSSKILWVAIVDEDRCVVK 282
                  Y G+S  F    L D     +G   +Y      SG  ++   W A+   D+C+V 
Sbjct:   228 -----Y-GDSNTFRFLKLDD-----DGNLRIYSSASRNSGPVNAH--WSAV---DQCLVY 271

Query:   283 GACGLNSYCSLNGTGIACFCPP-GFIYIDPEKPQEGCKLNSTIEDC 327
             G CG    CS N T   C CP   F ++D    ++GCK    + DC
Sbjct:   272 GYCGNFGICSYNDTNPICSCPSRNFDFVDVNDRRKGCKRKVELSDC 317
GO:0004672 "protein kinase activity" evidence=IEA
GO:0004674 "protein serine/threonine kinase activity" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
GO:0005886 "plasma membrane" evidence=ISM;IDA
GO:0006468 "protein phosphorylation" evidence=IEA
GO:0016301 "kinase activity" evidence=ISS
GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA
GO:0030246 "carbohydrate binding" evidence=IEA;ISS
GO:0048544 "recognition of pollen" evidence=IEA
GO:0006487 "protein N-linked glycosylation" evidence=RCA
TAIR|locus:2141181 RK3 "receptor kinase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2088619 AT3G12000 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2018546 RK1 "receptor kinase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2054326 AT2G41890 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2018506 RK2 "receptor kinase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2197734 AT1G61370 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2197744 AT1G61420 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q39688 EP1 "Epidermis-specific secreted glycoprotein EP1" [Daucus carota (taxid:4039)] Back     alignment and assigned GO terms
TAIR|locus:2037508 AT1G78850 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00034863001
SubName- Full=Chromosome chr4 scaffold_73, whole genome shotgun sequence; (775 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query329
pfam01453109 pfam01453, B_lectin, D-mannose binding lectin 4e-21
smart00108114 smart00108, B_lectin, Bulb-type mannose-specific l 5e-11
cd00028116 cd00028, B_lectin, Bulb-type mannose-specific lect 7e-10
>gnl|CDD|216511 pfam01453, B_lectin, D-mannose binding lectin Back     alignment and domain information 
 Score = 86.6 bits (215), Expect = 4e-21
 Identities = 36/97 (37%), Positives = 46/97 (47%), Gaps = 2/97 (2%)

Query: 78  VWTARRTDPVVSSGAALQFSVDGSRVLLRNSNGEV-QLIAEPTRTAVAAAMLDSGNFVLC 136
           VW A R +P+  S   L    DG+ VL   +   V         +   A + D GN VL 
Sbjct: 5   VWVANRLNPLTDSSYTLILQSDGNLVLYDGNGRVVWSSNTSGKGSGCVAVLQDDGNLVLY 64

Query: 137 DSSSQTVWASFDHPTDTLLVSQKLAKDSELYSSMSLT 173
           D+S + +W SFDHPTDTLL  QK      +  S  LT
Sbjct: 65  DNSGKVLWQSFDHPTDTLLPGQKDGNVV-IGGSRRLT 100

These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria. Length = 109
>gnl|CDD|214519 smart00108, B_lectin, Bulb-type mannose-specific lectin Back     alignment and domain information
>gnl|CDD|237995 cd00028, B_lectin, Bulb-type mannose-specific lectin Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 329
PF01453114 B_lectin: D-mannose binding lectin; InterPro: IPR0 99.95
cd00028116 B_lectin Bulb-type mannose-specific lectin. The do 99.93
smart00108114 B_lectin Bulb-type mannose-specific lectin. 99.91
PF00954110 S_locus_glycop: S-locus glycoprotein family; Inter 99.82
smart00108114 B_lectin Bulb-type mannose-specific lectin. 99.12
cd00028116 B_lectin Bulb-type mannose-specific lectin. The do 99.1
PF01453114 B_lectin: D-mannose binding lectin; InterPro: IPR0 98.97
cd0005336 EGF Epidermal growth factor domain, found in epide 90.86
PF0764542 EGF_CA: Calcium-binding EGF domain; InterPro: IPR0 90.34
smart0017939 EGF_CA Calcium-binding EGF-like domain. 88.41
cd0005438 EGF_CA Calcium-binding EGF-like domain, present in 86.87
PF0717295 GRP: Glycine rich protein family; InterPro: IPR010 86.77
PF0168352 EB: EB module; InterPro: IPR006149 The EB domain h 85.59
>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity Back     alignment and domain information 
Probab=99.95  E-value=7.3e-29  Score=201.97  Aligned_cols=101  Identities=42%  Similarity=0.579  Sum_probs=75.2

Q ss_pred             CcEEEEcCCCCCccC--CcceEEEecCCcEEEEecCCCceEEee-cCC-C--CceEEEEecCCCeeEecCCCeeEEeecC
Q 039395           75 IIDVWTARRTDPVVS--SGAALQFSVDGSRVLLRNSNGEVQLIA-EPT-R--TAVAAAMLDSGNFVLCDSSSQTVWASFD  148 (329)
Q Consensus        75 ~~~vW~anr~~p~~~--~~~~l~l~~~G~L~~l~d~~~~~vW~s-~~~-~--~~~~~~l~d~GNlVl~~~~~~~~W~SFd  148 (329)
                      +++||+|||+.|+..  ...+|.|+.||+|+ |+|..++++|++ ++. .  .+..|+|+|+|||||+|..+.+|||||+
T Consensus         2 ~tvvW~an~~~p~~~~s~~~~L~l~~dGnLv-l~~~~~~~iWss~~t~~~~~~~~~~~L~~~GNlvl~d~~~~~lW~Sf~   80 (114)
T PF01453_consen    2 RTVVWVANRNSPLTSSSGNYTLILQSDGNLV-LYDSNGSVIWSSNNTSGRGNSGCYLVLQDDGNLVLYDSSGNVLWQSFD   80 (114)
T ss_dssp             --------TTEEEEECETTEEEEEETTSEEE-EEETTTEEEEE--S-TTSS-SSEEEEEETTSEEEEEETTSEEEEESTT
T ss_pred             cccccccccccccccccccccceECCCCeEE-EEcCCCCEEEEecccCCccccCeEEEEeCCCCEEEEeecceEEEeecC
Confidence            789999999999953  34789999999999 999998999999 544 3  4789999999999999998999999999


Q ss_pred             CCCCccccCcccCC----C--ceeeecCCCCCCC
Q 039395          149 HPTDTLLVSQKLAK----D--SELYSSMSLTNQS  176 (329)
Q Consensus       149 ~PtDtllpgq~L~~----~--~~L~Sw~s~~dps  176 (329)
                      ||+||+||+|+|+.    +  ..|+||++.+||+
T Consensus        81 ~ptdt~L~~q~l~~~~~~~~~~~~~sw~s~~dps  114 (114)
T PF01453_consen   81 YPTDTLLPGQKLGDGNVTGKNDSLTSWSSNTDPS  114 (114)
T ss_dssp             SSS-EEEEEET--TSEEEEESTSSEEEESS----
T ss_pred             CCccEEEeccCcccCCCccccceEEeECCCCCCC
Confidence            99999999999987    2  3599999999986

Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....
>cd00028 B_lectin Bulb-type mannose-specific lectin Back     alignment and domain information
>smart00108 B_lectin Bulb-type mannose-specific lectin Back     alignment and domain information
>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation Back     alignment and domain information
>smart00108 B_lectin Bulb-type mannose-specific lectin Back     alignment and domain information
>cd00028 B_lectin Bulb-type mannose-specific lectin Back     alignment and domain information
>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity Back     alignment and domain information
>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium Back     alignment and domain information
>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins Back     alignment and domain information
>smart00179 EGF_CA Calcium-binding EGF-like domain Back     alignment and domain information
>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins Back     alignment and domain information
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins Back     alignment and domain information
>PF01683 EB: EB module; InterPro: IPR006149 The EB domain has no known function Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query329
3m7h_A276 Putidacin L1; monocot mannose-binding lectin, bact 6e-10
1xd5_A112 Gastrodianin-1, antifungal protein GAFP-1; monocot 4e-09
1xd5_A112 Gastrodianin-1, antifungal protein GAFP-1; monocot 6e-04
3mez_A111 Mannose-specific lectin 3 chain 1; heterotetramer, 1e-08
3dzw_A109 Agglutinin; lectin, mannobiose, mannose-alpha1, 3- 2e-08
2dpf_A115 Curculin; sweet taste, taste modifying, plant prot 3e-08
3mez_B113 Mannose-specific lectin 3 chain 2; heterotetramer, 9e-08
3r0e_B110 Lectin; carbohydrate binding, carbohydrate, sugar 2e-07
1b2p_A119 Protein (lectin); mannose-binding lectin, monocot, 4e-07
1b2p_A119 Protein (lectin); mannose-binding lectin, monocot, 2e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
1dlp_A236 Lectin scafet precursor; two-domain lectin, beta p 3e-05
1kj1_A109 Lectin I, lecgna 1; BULB lectin, mannose, plant pr 6e-05
3a0c_A110 Mannose/sialic acid-binding lectin; beta-prism II, 5e-04
>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Length = 276 Back     alignment and structure
 Score = 58.1 bits (139), Expect = 6e-10
 Identities = 42/231 (18%), Positives = 65/231 (28%), Gaps = 17/231 (7%)

Query: 20  AQTPQSNITTGSTLYTNSSPNFWPSPSGHFAFGFYPTGN----GFKAGIWLIGSGPANDI 75
                S +    TL       +  SP+  F       GN       A +W+  +      
Sbjct: 10  NGVGTSVLPAYQTLSAGQ---YLLSPNQRFKLLLQGDGNLVIQDNGATVWV--ANEQQPF 64

Query: 76  IDVWTARRTDPVVSSGAALQFSVDGSRVLLRNSNGEVQLIAEPTRTAVAAAMLDSGNFVL 135
                 R     ++        +D                +          + D GN VL
Sbjct: 65  SSTIPLRNKKAPLAFYVQYGAFLDDYSRRRVWLTDNSTFTSNDQWNRTHLVLQDDGNIVL 124

Query: 136 CDSSSQTVWASFDHPTDTLLVSQKLAKDSELYSSMSLTNQSIGNFKLLMQSDGNLNAFPL 195
            DS +              + S  LA  SEL   +       G  KL+ Q DGNL A+  
Sbjct: 125 VDSLALWNGTPAIPLVPGAIDSLLLAPGSELVQGVVYGA---GASKLVFQGDGNLVAY-- 179

Query: 196 RSIQDGKYGYWSSYTSGAGHNVTLNLDQYGILYLGNSTGFIVKNLTDGRPS 246
                     W++ T G G    +      ++  G     +  + T G  S
Sbjct: 180 ---GPNGAATWNAGTQGKGAVRAVFQGDGNLVVYGAGNAVLWHSHTGGHAS 227
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Length = 112 Back     alignment and structure
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Length = 112 Back     alignment and structure
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 111 Back     alignment and structure
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Length = 109 Back     alignment and structure
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Length = 115 Back     alignment and structure
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 113 Back     alignment and structure
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 110 Back     alignment and structure
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Length = 119 Back     alignment and structure
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Length = 119 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236 Back     alignment and structure
>1kj1_A Lectin I, lecgna 1; BULB lectin, mannose, plant protein; HET: MAN; 2.20A {Allium sativum} SCOP: b.78.1.1 PDB: 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Length = 109 Back     alignment and structure
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Length = 110 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query329
3m7h_A276 Putidacin L1; monocot mannose-binding lectin, bact 100.0
1dlp_A236 Lectin scafet precursor; two-domain lectin, beta p 100.0
4h3o_A105 Lectin; cadmium, plant protein; 2.17A {Allium sati 99.9
3a0c_A110 Mannose/sialic acid-binding lectin; beta-prism II, 99.87
1b2p_A119 Protein (lectin); mannose-binding lectin, monocot, 99.87
2dpf_A115 Curculin; sweet taste, taste modifying, plant prot 99.85
1xd5_A112 Gastrodianin-1, antifungal protein GAFP-1; monocot 99.84
3dzw_A109 Agglutinin; lectin, mannobiose, mannose-alpha1, 3- 99.8
3r0e_B110 Lectin; carbohydrate binding, carbohydrate, sugar 99.78
3mez_B113 Mannose-specific lectin 3 chain 2; heterotetramer, 99.77
1xd5_A112 Gastrodianin-1, antifungal protein GAFP-1; monocot 99.75
3a0c_A110 Mannose/sialic acid-binding lectin; beta-prism II, 99.74
3r0e_A109 Lectin; carbohydrate binding, carbohydrate, sugar 99.74
1b2p_A119 Protein (lectin); mannose-binding lectin, monocot, 99.71
3mez_A111 Mannose-specific lectin 3 chain 1; heterotetramer, 99.69
2dpf_A115 Curculin; sweet taste, taste modifying, plant prot 99.69
3mez_B113 Mannose-specific lectin 3 chain 2; heterotetramer, 99.6
3mez_A111 Mannose-specific lectin 3 chain 1; heterotetramer, 99.55
3dzw_A109 Agglutinin; lectin, mannobiose, mannose-alpha1, 3- 99.52
3r0e_B110 Lectin; carbohydrate binding, carbohydrate, sugar 99.51
4h3o_A105 Lectin; cadmium, plant protein; 2.17A {Allium sati 99.46
3r0e_A109 Lectin; carbohydrate binding, carbohydrate, sugar 99.44
3m7h_A276 Putidacin L1; monocot mannose-binding lectin, bact 99.39
1dlp_A236 Lectin scafet precursor; two-domain lectin, beta p 99.3
1edm_B39 Factor IX; epidermal growth factor, EGF, calcium- 87.38
3no2_A276 Uncharacterized protein; six-bladed beta-propeller 86.62
1egf_A53 Epidermal growth factor; NMR {Mus musculus} SCOP: 83.45
3no2_A276 Uncharacterized protein; six-bladed beta-propeller 80.56
>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Back     alignment and structure
Probab=100.00  E-value=3.6e-42  Score=319.71  Aligned_cols=209  Identities=22%  Similarity=0.272  Sum_probs=173.0

Q ss_pred             cccCcccccCCCceecCCCCCeEeeCCCeEEEEeecCCCceEEEEEecccCCCCCCcEEEEcCCCCCccCC----cceEE
Q 039395           20 AQTPQSNITTGSTLYTNSSPNFWPSPSGHFAFGFYPTGNGFKAGIWLIGSGPANDIIDVWTARRTDPVVSS----GAALQ   95 (329)
Q Consensus        20 ~~~~~~~l~~g~~l~~~~~~~~l~S~~g~f~lgf~~~~~~~~l~i~~~~~~~~~~~~~vW~anr~~p~~~~----~~~l~   95 (329)
                      .+++.|+|.+|++|.++   ++|+|++|.|+||||.+++. |+   |+   +.  + +||+|||++|+.+.    +++|+
T Consensus        10 ~~~~~~~l~~g~~l~~~---~~l~S~~g~F~lgf~~~~~~-~l---y~---~~--~-vvW~Anr~~p~~~~~~~~~~~l~   76 (276)
T 3m7h_A           10 NGVGTSVLPAYQTLSAG---QYLLSPNQRFKLLLQGDGNL-VI---QD---NG--A-TVWVANEQQPFSSTIPLRNKKAP   76 (276)
T ss_dssp             CCTTSSEECTTEEBCTT---CEEECTTSSEEEEECTTSCE-EE---EE---TT--E-EEEECSTTSTTEEEEECCCTTCC
T ss_pred             ccccCCEecCCCEecCC---CEEEcCCCcEEEEEECCCCe-EE---EC---CC--C-eEEECCCCCCcCCcccccceEEE
Confidence            35567999999999884   89999999999999977643 44   64   55  6 99999999999854    78999


Q ss_pred             EecCCcEEEE--ecCCCceEEeecCCC-------CceEEEEecCCCeeEecCCCeeEEeecCCCCCccccCcc----cCC
Q 039395           96 FSVDGSRVLL--RNSNGEVQLIAEPTR-------TAVAAAMLDSGNFVLCDSSSQTVWASFDHPTDTLLVSQK----LAK  162 (329)
Q Consensus        96 l~~~G~L~~l--~d~~~~~vW~s~~~~-------~~~~~~l~d~GNlVl~~~~~~~~W~SFd~PtDtllpgq~----L~~  162 (329)
                      |+.||+|+ |  .|++|.+||++++..       .+..|+|+|+|||||+|  +.+||||  ||||||||||+    |..
T Consensus        77 l~~~G~Lv-l~~~~~~~~~vWst~~~~~~~~~~~~~~~a~L~d~GNlVl~~--~~~lWqS--~ptdtlLpg~~~~~~l~~  151 (276)
T 3m7h_A           77 LAFYVQYG-AFLDDYSRRRVWLTDNSTFTSNDQWNRTHLVLQDDGNIVLVD--SLALWNG--TPAIPLVPGAIDSLLLAP  151 (276)
T ss_dssp             SEEEESSS-EEEEEGGGTEEEEECCCCCCCTTHHHHEEEEECTTSCEEEEE--EEEEEES--CTTSCCCCSCTTCEEECS
T ss_pred             EeCCCcEE-EEEeCCCCCEEEEeCCCcccccccCCceEEEEeCCCCEEecC--CceeeCc--cccccccccccccccccc
Confidence            99999999 8  777889999998642       35789999999999998  7899999  99999999999    777


Q ss_pred             CceeeecCCCCCCCCceEEEEEccCCceeEEeccccCCCCcceeecCCCCCCceeEEEecCcceEEEeccCCcEEEEe--
Q 039395          163 DSELYSSMSLTNQSIGNFKLLMQSDGNLNAFPLRSIQDGKYGYWSSYTSGAGHNVTLNLDQYGILYLGNSTGFIVKNL--  240 (329)
Q Consensus       163 ~~~L~Sw~s~~dps~G~y~l~~~~~g~~~l~~~~~~~~~~~~yW~sg~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--  240 (329)
                      ++.|   ++.+||++|.|+|+||++|++++|..     +...||++++++.+. ..++++.+|.+++++.++..+..+  
T Consensus       152 g~~L---~S~~dps~G~fsl~l~~dGnlvLy~~-----~~~~yW~Sgt~~~~~-~~l~l~~dGnLvl~d~~~~~vWsS~t  222 (276)
T 3m7h_A          152 GSEL---VQGVVYGAGASKLVFQGDGNLVAYGP-----NGAATWNAGTQGKGA-VRAVFQGDGNLVVYGAGNAVLWHSHT  222 (276)
T ss_dssp             SEEE---CTTCEEEETTEEEEECTTSCEEEECT-----TSSEEEECCCTTTTC-CEEEECTTSCEEEECTTSCEEEECSC
T ss_pred             Cccc---ccCCCCCCceEEEeecCCceEEEEeC-----CCeEEEECCCCCCcc-EEEEEcCCCeEEEEeCCCcEEEEecC
Confidence            8888   56789999999999999999888732     246899999997665 668889899998886554332111  


Q ss_pred             ------eCCCcCcCCcEEEEEe
Q 039395          241 ------TDGRPSVNGTTLLYQH  256 (329)
Q Consensus       241 ------~~~~~~~dG~l~~y~w  256 (329)
                            +.. ++.||+|++|.|
T Consensus       223 ~~~~~~rl~-Ld~dGnLvly~~  243 (276)
T 3m7h_A          223 GGHASAVLR-LQANGSIAILDE  243 (276)
T ss_dssp             TTCTTCEEE-ECTTSCEEEEEE
T ss_pred             CCCCCEEEE-EcCCccEEEEcC
Confidence                  222 359999999998
>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Back     alignment and structure
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Back     alignment and structure
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Back     alignment and structure
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Back     alignment and structure
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Back     alignment and structure
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Back     alignment and structure
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Back     alignment and structure
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Back     alignment and structure
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 Back     alignment and structure
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Back     alignment and structure
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Back     alignment and structure
>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Back     alignment and structure
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Back     alignment and structure
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 Back     alignment and structure
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Back     alignment and structure
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 Back     alignment and structure
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 Back     alignment and structure
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Back     alignment and structure
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Back     alignment and structure
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Back     alignment and structure
>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Back     alignment and structure
>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Back     alignment and structure
>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Back     alignment and structure
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A Back     alignment and structure
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} Back     alignment and structure
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A Back     alignment and structure
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 329
d1dlpa2120 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet 4e-09
d1b2pa_119 b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scill 5e-08
d1xd5a_112 b.78.1.1 (A:) Gastrodianin (antifungal protein) {G 5e-08
d1xd5a_112 b.78.1.1 (A:) Gastrodianin (antifungal protein) {G 6e-07
d1jpca_108 b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galan 3e-06
d1dlpa1115 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet p 7e-06
d1kj1a_109 b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium 1e-04
d1kj1a_109 b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium 3e-04
d1gtea5173 d.58.1.5 (A:845-1017) Dihydropyrimidine dehydrogen 2e-04
>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 120 Back     information, alignment and structure

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

 Score = 51.8 bits (124), Expect = 4e-09
 Identities = 22/127 (17%), Positives = 35/127 (27%), Gaps = 28/127 (22%)

Query: 64  IWLIGSGPANDIIDVWTARRTDPVVSSGAALQFSVDGSRVLLRNSNGEVQLIAEPTRTAV 123
           I     G  N      T   T  +  S   L    D + VL    +           T  
Sbjct: 12  ILYSTQGNDNH---PQTLHATQSLQLSPYRLSMETDCNLVLFDRDDRVWSTNTAGKGTGC 68

Query: 124 AAAMLDSGNFVLCDSSSQTVWASFDHPTDTLLVSQKLAKDSELYSSMSLTNQSIGNFKLL 183
            A +  +G   +  + +  VW S                           ++S G +  +
Sbjct: 69  RAVLQPNGRMDVLTNQNIAVWTSG-------------------------NSRSAGRYVFV 103

Query: 184 MQSDGNL 190
           +Q D NL
Sbjct: 104 LQPDRNL 110
>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 119 Back     information, alignment and structure
>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Length = 112 Back     information, alignment and structure
>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Length = 112 Back     information, alignment and structure
>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Length = 108 Back     information, alignment and structure
>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 115 Back     information, alignment and structure
>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Length = 109 Back     information, alignment and structure
>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Length = 109 Back     information, alignment and structure
>d1gtea5 d.58.1.5 (A:845-1017) Dihydropyrimidine dehydrogenase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} Length = 173 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query329
d1xd5a_112 Gastrodianin (antifungal protein) {Gastrodia elata 99.89
d1kj1a_109 Lectin (agglutinin) {Garlic (Allium sativum) [TaxI 99.88
d1jpca_108 Lectin (agglutinin) {Snowdrop (Galanthus nivalis) 99.87
d1dlpa2120 Fetuin-binding protein Scafet precursor {Bluebell 99.8
d1dlpa1115 Fetuin-binding protein Scafet precursor {Bluebell 99.75
d1b2pa_119 Lectin (agglutinin) {Bluebell (Scilla campanulata) 99.74
d1dlpa1115 Fetuin-binding protein Scafet precursor {Bluebell 99.64
d1b2pa_119 Lectin (agglutinin) {Bluebell (Scilla campanulata) 99.49
d1dlpa2120 Fetuin-binding protein Scafet precursor {Bluebell 99.46
d1jpca_108 Lectin (agglutinin) {Snowdrop (Galanthus nivalis) 99.45
d1kj1a_109 Lectin (agglutinin) {Garlic (Allium sativum) [TaxI 99.44
d1xd5a_112 Gastrodianin (antifungal protein) {Gastrodia elata 99.26
d1emoa239 Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} 95.84
d2vj3a142 Neurogenic locus notch homolog protein 1, Notch1 { 92.88
d1xkba139 Factor X, N-terminal module {Human (Homo sapiens) 91.96
d2vj3a239 Neurogenic locus notch homolog protein 1, Notch1 { 89.87
d1edmb_39 Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606 89.35
d1emoa143 Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} 88.22
d1lmja144 Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} 87.71
d2vj3a335 Neurogenic locus notch homolog protein 1, Notch1 { 87.43
d1uzka143 Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} 86.83
d1i0ua241 Low density lipoprotein (LDL) receptor, different 86.24
d2c4fl137 Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]} 84.24
d1lmja242 Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} 83.51
d1autl148 Activated protein c (autoprothrombin IIa) {Human ( 83.44
d1g1ta239 E-selectin, EGF-domain {Human (Homo sapiens) [TaxI 83.22
d3egfa_53 Epidermal growth factor, EGF {Mouse (Mus musculus) 82.45
>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Back     information, alignment and structure
class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

Probab=99.89  E-value=5.2e-23  Score=163.86  Aligned_cols=110  Identities=18%  Similarity=0.289  Sum_probs=93.0

Q ss_pred             cccccCCCceecCCCCCeEeeCCCeEEEEeecCCCceEEEEEecccCCCCCCcEEEEcCCCCCccCCcceEEEecCCcEE
Q 039395           24 QSNITTGSTLYTNSSPNFWPSPSGHFAFGFYPTGNGFKAGIWLIGSGPANDIIDVWTARRTDPVVSSGAALQFSVDGSRV  103 (329)
Q Consensus        24 ~~~l~~g~~l~~~~~~~~l~S~~g~f~lgf~~~~~~~~l~i~~~~~~~~~~~~~vW~anr~~p~~~~~~~l~l~~~G~L~  103 (329)
                      +|+|.+||.|.++   +.|++  |.|+|.||.|||.   .+ |.    .  .++||.|++..|.  .++.|+|+.||+|+
T Consensus         1 tDtL~~gq~L~~g---~~l~~--g~~~l~~q~DGNL---vl-y~----~--~~~vW~s~~~~~~--~~~~l~l~~dGnLv   63 (112)
T d1xd5a_           1 SDRLNSGHQLDTG---GSLAE--GGYLFIIQNDCNL---VL-YD----N--NRAVWASGTNGKA--SGCVLKMQNDGNLV   63 (112)
T ss_dssp             CCEEETTEEECTT---CEEEE--TTEEEEECTTSCE---EE-EE----T--TEEEEECCCTTSC--SSEEEEECTTSCEE
T ss_pred             CCEecCCCEecCC---CEEEE--CCEEEEEcCCCCE---EE-Ec----C--CcEEEEccCccCC--CCcEEEEeccccEE
Confidence            4789999999985   88974  8899999999984   33 43    2  6899999998774  46789999999999


Q ss_pred             EEecCCCceEEeecCC--CCceEEEEecCCCeeEecCCCeeEEeecCCCCC
Q 039395          104 LLRNSNGEVQLIAEPT--RTAVAAAMLDSGNFVLCDSSSQTVWASFDHPTD  152 (329)
Q Consensus       104 ~l~d~~~~~vW~s~~~--~~~~~~~l~d~GNlVl~~~~~~~~W~SFd~PtD  152 (329)
                       |+|. +.++|++++.  .+..+|+|+||||||||+.++.++|||+.+|++
T Consensus        64 -l~~~-~~~~w~s~t~~~~~~~~l~L~ddGNlvly~~~~~~~W~S~t~~~n  112 (112)
T d1xd5a_          64 -IYSG-SRAIWASNTNRQNGNYYLILQRDRNVVIYDNSNNAIWATHTNVGN  112 (112)
T ss_dssp             -EEET-TEEEEECCCCCSCCCCEEEECTTSCEEEECTTSCEEEECCCCCCC
T ss_pred             -EEec-CCeEEEEeeccCCCceEEEEcCCCCEEEECCCCcEEecCCCccCC
Confidence             9985 5677877754  456789999999999999999999999999975
>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Back     information, alignment and structure
>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Back     information, alignment and structure
>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Back     information, alignment and structure
>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Back     information, alignment and structure
>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Back     information, alignment and structure
>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure