Citrus Sinensis ID: 039407

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------
MVTGVASSRATILGTGADDKLNHNNQPLRRNLLANGLAETPAMGWNSWNHFWGNINEDIIKAAADALVSSGLAKLGYIYVNIDDCWGEQDRDEKGNLQARNTTFPSGIKALADYVHGKGLKLGIYSSAGYYTCSKQMPGSLGYEDQDAKTFASWGVDYLKYDNCYNDGSKPMDRYPVMTRALMNTGRPIYYSLCEWGDMHPALWGDKVGNSWRTTGDIEDTWDSMISRADENEAFAKYARPGGWNDPDMLEVGNGGMTKDEYIVHFSIWAISKAPLLLGCDVRNMTDDTLEIVGNKEVIAVNQDPLGIQAKKVRWEGDQEVWAAPLSGYRIALLLVNRGPWRYAVTAKWEDIGIPPNSVVEARDLWEHKTLTKQFVGNLSAMVGSHACKMYILKPIS
ccccccHHHHHHHccccccccccccccHHHccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccEEEEEccccccccccccccEEEcccccccccHHHHHHHHHcccEEEEEccccccccccccccccccHHHHHHHHHHccccEEEEcccccccccccccHHHHHHHHHHccccEEEEcccccccccccHHcccccEEEEcccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccHHHHHHHccHHHHHccccccccccEEEEEcccEEEEEEEcccccEEEEEEEcccccEEEEEEccccccccccEEEEEEccccccccEEEcEEEEEEEccccEEEEEEEEcc
ccEEEEEcccEEEEccccccccccHHHHHHHHHHccccccccEEEEcHHHHcccccHHHHHHHHHHHHHccHHHHcccEEEcccccEcccccccccccEccccccccHHHHHHHHHHcccEEEEEEEcccEccccccEcccccHHHHHHHHHHHcccEEEEEccccccccHHHHHHHHHHHHHHHccccEEEEEccccccHHHcHHHcccEEEccccccccHHHHHHHHHHHHccHHHcEccEEEEccccccccccccHHHHHHHHHHHHHccccEEEccccccccHHHHHHHccHHHHHHHccccccccEEEEEEccEEEEEEEcccccEEEEEEEcccccEEEEEEHHHcccccccEEEEEEccccEEEEEEcccEEEEEEccccEEEEEEEEcc
MVTGVASsratilgtgaddklnhnnqplRRNLLAnglaetpamgwnswnhFWGNINEDIIKAAADALVSSGLAKLGYIYVNiddcwgeqdrdekgnlqarnttFPSGIKALADYvhgkglklgiyssagyytcskqmpgslgyedqdaKTFASWGvdylkydncyndgskpmdrypVMTRALmntgrpiyyslcewgdmhpalwgdkvgnswrttgdiedtwDSMISRADENEAFAKyarpggwndpdmlevgnggmtkdeYIVHFSIWAIskaplllgcdvrnmtddtleivgnkeviavnqdplgiqAKKVRWEgdqevwaaplSGYRIALLLVnrgpwryavtakwedigippnsvvEARDLWEHKTLTKQFVGNLSAMVGSHACKMYILKPIS
mvtgvassratilgtgaddklnhnnQPLRRNLLANGLAETPAMGWNSWNHFWGNINEDIIKAAADALVSSGLAKLGYIYVNIDDCWGEQDRDEKGNLQARNTTFPSGIKALADYVHGKGLKLGIYSSAGYYTCSKQMPGSLGYEDQDAKTFASWGVDYLKYDNCYNDGSKPMDRYPVMTRALMNTGRPIYYSLCEWGDMHPALWGDKVGNSWRTTGDIEDTWDSMISRADENEAFAKyarpggwndpDMLEVGNGGMTKDEYIVHFSIWAISKAPLLLGCDVRNMTDDTLEIVGnkeviavnqdplgIQAKKVRWEGDQEVWAAPLSGYRIALLLVNRGPWRYAVTakwedigippnSVVEARDLWEHKTLTKQFVGNLSAMVGSHACKMYILKPIS
MVTGVASSRATILGTGADDKLNHNNQPLRRNLLANGLAETPAMGWNSWNHFWGNINEDIIKAAADALVSSGLAKLGYIYVNIDDCWGEQDRDEKGNLQARNTTFPSGIKALADYVHGKGLKLGIYSSAGYYTCSKQMPGSLGYEDQDAKTFASWGVDYLKYDNCYNDGSKPMDRYPVMTRALMNTGRPIYYSLCEWGDMHPALWGDKVGNSWRTTGDIEDTWDSMISRADENEAFAKYARPGGWNDPDMLEVGNGGMTKDEYIVHFSIWAISKAPLLLGCDVRNMTDDTLEIVGNKEVIAVNQDPLGIQAKKVRWEGDQEVWAAPLSGYRIALLLVNRGPWRYAVTAKWEDIGIPPNSVVEARDLWEHKTLTKQFVGNLSAMVGSHACKMYILKPIS
*****************************RNLLANGLAETPAMGWNSWNHFWGNINEDIIKAAADALVSSGLAKLGYIYVNIDDCWGEQ**********RNTTFPSGIKALADYVHGKGLKLGIYSSAGYYTCSKQMPGSLGYEDQDAKTFASWGVDYLKYDNCYNDGSKPMDRYPVMTRALMNTGRPIYYSLCEWGDMHPALWGDKVGNSWRTTGDIEDTWDSMISRADENEAFAKYARPGGWNDPDMLEVGNGGMTKDEYIVHFSIWAISKAPLLLGCDVRNMTDDTLEIVGNKEVIAVNQDPLGIQAKKVRWEGDQEVWAAPLSGYRIALLLVNRGPWRYAVTAKWEDIGIPPNSVVEARDLWEHKTLTKQFVGNLSAMVGSHACKMYILK***
**T****SRATILGTGA***************LANGLAETPAMGWNSWNHFWGNINEDIIKAAADALVSSGLAKLGYIYVNIDDCWGEQDRDEKGNLQARNTTFPSGIKALADYVHGKGLKLGIYSSAGYYTCSKQMPGSLGYEDQDAKTFASWGVDYLKYDNCYNDGSKPMDRYPVMTRALMNTGRPIYYSLCEWGDMHPALWGDKVGNSWRTTGDIEDTWDSMISRADENEAFAKYARPGGWNDPDMLEVGNGGMTKDEYIVHFSIWAISKAPLLLGCDVRNMTDDTLEIVGNKEVIAVNQDPLGIQAKKVRWEGDQEVWAAPLSGYRIALLLVNRGPWRYAVTAKWEDIGIPPNSVVEARDLWEHKTLTKQFVGNLSAMVGSHACKMYILKPIS
********RATILGTGADDKLNHNNQPLRRNLLANGLAETPAMGWNSWNHFWGNINEDIIKAAADALVSSGLAKLGYIYVNIDDCWGEQDRDEKGNLQARNTTFPSGIKALADYVHGKGLKLGIYSSAGYYTCSKQMPGSLGYEDQDAKTFASWGVDYLKYDNCYNDGSKPMDRYPVMTRALMNTGRPIYYSLCEWGDMHPALWGDKVGNSWRTTGDIEDTWDSMISRADENEAFAKYARPGGWNDPDMLEVGNGGMTKDEYIVHFSIWAISKAPLLLGCDVRNMTDDTLEIVGNKEVIAVNQDPLGIQAKKVRWEGDQEVWAAPLSGYRIALLLVNRGPWRYAVTAKWEDIGIPPNSVVEARDLWEHKTLTKQFVGNLSAMVGSHACKMYILKPIS
MVTGVASSRATILGTGADDKLNHNNQPLRRNLLANGLAETPAMGWNSWNHFWGNINEDIIKAAADALVSSGLAKLGYIYVNIDDCWGEQDRDEKGNLQARNTTFPSGIKALADYVHGKGLKLGIYSSAGYYTCSKQMPGSLGYEDQDAKTFASWGVDYLKYDNCYNDGSKPMDRYPVMTRALMNTGRPIYYSLCEWGDMHPALWGDKVGNSWRTTGDIEDTWDSMISRADENEAFAKYARPGGWNDPDMLEVGNGGMTKDEYIVHFSIWAISKAPLLLGCDVRNMTDDTLEIVGNKEVIAVNQDPLGIQAKKVRWEGDQEVWAAPLSGYRIALLLVNRGPWRYAVTAKWEDIGIPPNSVVEARDLWEHKTLTKQFVGNLSAMVGSHACKMYILKPIS
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SSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MVTGVASSRATILGTGADDKLNHNNQPLRRNLLANGLAETPAMGWNSWNHFWGNINEDIIKAAADALVSSGLAKLGYIYVNIDDCWGEQDRDEKGNLQARNTTFPSGIKALADYVHGKGLKLGIYSSAGYYTCSKQMPGSLGYEDQDAKTFASWGVDYLKYDNCYNDGSKPMDRYPVMTRALMNTGRPIYYSLCEWGDMHPALWGDKVGNSWRTTGDIEDTWDSMISRADENEAFAKYARPGGWNDPDMLEVGNGGMTKDEYIVHFSIWAISKAPLLLGCDVRNMTDDTLEIVGNKEVIAVNQDPLGIQAKKVRWEGDQEVWAAPLSGYRIALLLVNRGPWRYAVTAKWEDIGIPPNSVVEARDLWEHKTLTKQFVGNLSAMVGSHACKMYILKPIS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query397 2.2.26 [Sep-21-2011]
Q42656378 Alpha-galactosidase OS=Co N/A no 0.921 0.968 0.645 1e-142
P14749411 Alpha-galactosidase OS=Cy N/A no 0.929 0.897 0.627 1e-139
Q9FXT4417 Alpha-galactosidase OS=Or yes no 0.909 0.865 0.619 1e-132
Q55B10385 Probable alpha-galactosid yes no 0.909 0.937 0.464 4e-92
B3PGJ1404 Alpha-galactosidase A OS= yes no 0.755 0.742 0.519 1e-84
Q99172469 Alpha-galactosidase OS=Zy N/A no 0.798 0.675 0.427 2e-73
A4DA70 648 Probable alpha-galactosid yes no 0.891 0.546 0.412 1e-72
B0YEK2 648 Probable alpha-galactosid N/A no 0.891 0.546 0.412 1e-72
Q90744405 Alpha-N-acetylgalactosami yes no 0.904 0.886 0.4 6e-72
A1D9S3 648 Probable alpha-galactosid N/A no 0.894 0.547 0.410 4e-71
>sp|Q42656|AGAL_COFAR Alpha-galactosidase OS=Coffea arabica PE=1 SV=1 Back     alignment and function desciption
 Score =  505 bits (1301), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 237/367 (64%), Positives = 285/367 (77%), Gaps = 1/367 (0%)

Query: 29  RRNLLANGLAETPAMGWNSWNHFWGNINEDIIKAAADALVSSGLAKLGYIYVNIDDCWGE 88
           RR+LLANGL  TP MGWNSWNHF  N++E +I+  ADA+VS GLA LGY Y+N+DDCW E
Sbjct: 12  RRSLLANGLGLTPPMGWNSWNHFRCNLDEKLIRETADAMVSKGLAALGYKYINLDDCWAE 71

Query: 89  QDRDEKGNLQARNTTFPSGIKALADYVHGKGLKLGIYSSAGYYTCSKQMPGSLGYEDQDA 148
            +RD +GNL  + +TFPSGIKALADYVH KGLKLGIYS AG  TCSK MPGSLG+E+QDA
Sbjct: 72  LNRDSQGNLVPKGSTFPSGIKALADYVHSKGLKLGIYSDAGTQTCSKTMPGSLGHEEQDA 131

Query: 149 KTFASWGVDYLKYDNCYNDGSKPMDRYPVMTRALMNTGRPIYYSLCEWGDMHPALWGDKV 208
           KTFASWGVDYLKYDNC N+   P +RYP+M++AL+N+GR I++SLCEWG+  PA W  +V
Sbjct: 132 KTFASWGVDYLKYDNCNNNNISPKERYPIMSKALLNSGRSIFFSLCEWGEEDPATWAKEV 191

Query: 209 GNSWRTTGDIEDTWDSMISRADENEAFAKYARPGGWNDPDMLEVGNGGMTKDEYIVHFSI 268
           GNSWRTTGDI+D+W SM SRAD N+ +A YA PGGWNDPDMLEVGNGGMT  EY  HFSI
Sbjct: 192 GNSWRTTGDIDDSWSSMTSRADMNDKWASYAGPGGWNDPDMLEVGNGGMTTTEYRSHFSI 251

Query: 269 WAISKAPLLLGCDVRNMTDDTLEIVGNKEVIAVNQDPLGIQAKKVRWEGDQEVWAAPLSG 328
           WA++KAPLL+GCD+R+M   T +++ N EVIAVNQD LG+Q  KV+  GD EVWA PLSG
Sbjct: 252 WALAKAPLLIGCDIRSMDGATFQLLSNAEVIAVNQDKLGVQGNKVKTYGDLEVWAGPLSG 311

Query: 329 YRIALLLVNRGPWRYAVTAKWEDIGIPPNSVVEARDLWEHKTLTKQFVGNLSAMVGSHAC 388
            R+A+ L NRG     +TA W D+G+P  +VV ARDLW H T  K   G +SA V +H  
Sbjct: 312 KRVAVALWNRGSSTATITAYWSDVGLPSTAVVNARDLWAHST-EKSVKGQISAAVDAHDS 370

Query: 389 KMYILKP 395
           KMY+L P
Sbjct: 371 KMYVLTP 377
Preferentially cleaves alpha-1,3 and alpha-1,4 glycoside linkages. Involved in the hydrolysis of the galactomannan, it splits alpha-linked galactose moieties. It is particularly suitable for the hydrolysis of guar gum to a gum with improved gelling properties. Can cleave terminal alpha-1,3-linked galactose residues responsible for blood group B specificity from the surface of erythrocytes thereby converting these cells serologically to group O.
Coffea arabica (taxid: 13443)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 2
>sp|P14749|AGAL_CYATE Alpha-galactosidase OS=Cyamopsis tetragonoloba PE=1 SV=1 Back     alignment and function description
>sp|Q9FXT4|AGAL_ORYSJ Alpha-galactosidase OS=Oryza sativa subsp. japonica GN=Os10g0493600 PE=1 SV=1 Back     alignment and function description
>sp|Q55B10|AGAL_DICDI Probable alpha-galactosidase OS=Dictyostelium discoideum GN=melA PE=3 SV=1 Back     alignment and function description
>sp|B3PGJ1|AGAL_CELJU Alpha-galactosidase A OS=Cellvibrio japonicus (strain Ueda107) GN=agaA PE=1 SV=1 Back     alignment and function description
>sp|Q99172|MEL_ZYGCI Alpha-galactosidase OS=Zygosaccharomyces cidri GN=MEL PE=3 SV=1 Back     alignment and function description
>sp|A4DA70|AGALD_ASPFU Probable alpha-galactosidase D OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=aglD PE=3 SV=2 Back     alignment and function description
>sp|B0YEK2|AGALD_ASPFC Probable alpha-galactosidase D OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=aglD PE=3 SV=2 Back     alignment and function description
>sp|Q90744|NAGAB_CHICK Alpha-N-acetylgalactosaminidase OS=Gallus gallus GN=NAGA PE=1 SV=1 Back     alignment and function description
>sp|A1D9S3|AGALD_NEOFI Probable alpha-galactosidase D OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=aglD PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query397
225463807408 PREDICTED: alpha-galactosidase [Vitis vi 0.929 0.904 0.796 1e-178
53747927405 alpha-galactosidase 1 [Pisum sativum] 0.959 0.940 0.761 1e-178
356568242410 PREDICTED: alpha-galactosidase-like [Gly 0.952 0.921 0.761 1e-178
255544191412 alpha-galactosidase/alpha-n-acetylgalact 0.989 0.953 0.758 1e-177
224113219369 predicted protein [Populus trichocarpa] 0.929 1.0 0.785 1e-176
356532145410 PREDICTED: alpha-galactosidase-like [Gly 0.952 0.921 0.753 1e-175
15241601410 alpha-galactosidase 1 [Arabidopsis thali 0.982 0.951 0.735 1e-174
20260602410 alpha-galactosidase-like protein [Arabid 0.982 0.951 0.732 1e-174
449458720413 PREDICTED: alpha-galactosidase-like [Cuc 0.979 0.941 0.742 1e-174
30016922410 alpha-galactosidase [Carica papaya] 0.977 0.946 0.740 1e-173
>gi|225463807|ref|XP_002270791.1| PREDICTED: alpha-galactosidase [Vitis vinifera] gi|297742709|emb|CBI35343.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  631 bits (1627), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 294/369 (79%), Positives = 327/369 (88%)

Query: 29  RRNLLANGLAETPAMGWNSWNHFWGNINEDIIKAAADALVSSGLAKLGYIYVNIDDCWGE 88
           RRNLLAN L  TP MGWNSWNHF   I+E  IK  ADALV++GL KLGY YVNIDDCW E
Sbjct: 40  RRNLLANDLGITPPMGWNSWNHFNCKIDEKTIKETADALVATGLVKLGYEYVNIDDCWAE 99

Query: 89  QDRDEKGNLQARNTTFPSGIKALADYVHGKGLKLGIYSSAGYYTCSKQMPGSLGYEDQDA 148
            +RDEKG L A+ +TFPSGIKALADYVH KGLKLGIYS AGY+TCSK MPGSLG+E++DA
Sbjct: 100 INRDEKGTLVAKKSTFPSGIKALADYVHSKGLKLGIYSDAGYFTCSKTMPGSLGHEEKDA 159

Query: 149 KTFASWGVDYLKYDNCYNDGSKPMDRYPVMTRALMNTGRPIYYSLCEWGDMHPALWGDKV 208
           KTFASWG+DYLKYDNC NDGS+P DRYPVMTRALM  GRPI++SLCEWGDMHPALWG KV
Sbjct: 160 KTFASWGIDYLKYDNCNNDGSRPTDRYPVMTRALMKAGRPIFFSLCEWGDMHPALWGSKV 219

Query: 209 GNSWRTTGDIEDTWDSMISRADENEAFAKYARPGGWNDPDMLEVGNGGMTKDEYIVHFSI 268
           GNSWRTT DI DTWDSM+SRAD N+ +A+YARPGGWNDPDMLEVGNGGMT DEYIVHFSI
Sbjct: 220 GNSWRTTNDIADTWDSMMSRADMNDVYAQYARPGGWNDPDMLEVGNGGMTNDEYIVHFSI 279

Query: 269 WAISKAPLLLGCDVRNMTDDTLEIVGNKEVIAVNQDPLGIQAKKVRWEGDQEVWAAPLSG 328
           WAISKAPLL+GCDVRN T +TL+I+GNKEVIAVNQDPLG+QAKKVR EGDQE+WA PLS 
Sbjct: 280 WAISKAPLLIGCDVRNTTKETLDIIGNKEVIAVNQDPLGVQAKKVRSEGDQEIWAGPLSD 339

Query: 329 YRIALLLVNRGPWRYAVTAKWEDIGIPPNSVVEARDLWEHKTLTKQFVGNLSAMVGSHAC 388
           YR+ALLLVNRGPWRY+VTA W+DIG+P  +VVEARDLWEHKTL K+FVG+L+A + SHAC
Sbjct: 340 YRVALLLVNRGPWRYSVTANWDDIGLPTGTVVEARDLWEHKTLEKRFVGSLTATMDSHAC 399

Query: 389 KMYILKPIS 397
           KMYILKPIS
Sbjct: 400 KMYILKPIS 408

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|53747927|emb|CAF34023.1| alpha-galactosidase 1 [Pisum sativum] Back     alignment and taxonomy information
>gi|356568242|ref|XP_003552322.1| PREDICTED: alpha-galactosidase-like [Glycine max] Back     alignment and taxonomy information
>gi|255544191|ref|XP_002513158.1| alpha-galactosidase/alpha-n-acetylgalactosaminidase, putative [Ricinus communis] gi|223548169|gb|EEF49661.1| alpha-galactosidase/alpha-n-acetylgalactosaminidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224113219|ref|XP_002316426.1| predicted protein [Populus trichocarpa] gi|222865466|gb|EEF02597.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356532145|ref|XP_003534634.1| PREDICTED: alpha-galactosidase-like [Glycine max] Back     alignment and taxonomy information
>gi|15241601|ref|NP_196455.1| alpha-galactosidase 1 [Arabidopsis thaliana] gi|10178280|emb|CAC08338.1| alpha-galactosidase-like protein [Arabidopsis thaliana] gi|332003909|gb|AED91292.1| alpha-galactosidase 1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|20260602|gb|AAM13199.1| alpha-galactosidase-like protein [Arabidopsis thaliana] gi|30725668|gb|AAP37856.1| At5g08380 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449458720|ref|XP_004147095.1| PREDICTED: alpha-galactosidase-like [Cucumis sativus] gi|449503497|ref|XP_004162032.1| PREDICTED: alpha-galactosidase-like [Cucumis sativus] gi|84310212|gb|ABC55266.1| acid alpha galactosidase 1 [Cucumis sativus] Back     alignment and taxonomy information
>gi|30016922|gb|AAP04002.1| alpha-galactosidase [Carica papaya] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query397
TAIR|locus:2150778410 AGAL1 "alpha-galactosidase 1" 0.982 0.951 0.735 9e-164
TAIR|locus:2150763396 AGAL2 "alpha-galactosidase 2" 0.914 0.916 0.651 5.4e-134
UNIPROTKB|Q9FXT4417 LOC_Os10g35110 "Alpha-galactos 0.919 0.875 0.618 2.9e-126
UNIPROTKB|Q7XIV4425 OJ1409_C08.26 "Os07g0679300 pr 0.977 0.912 0.605 1.3e-123
TAIR|locus:2078416437 AT3G56310 [Arabidopsis thalian 0.911 0.828 0.625 2.7e-123
UNIPROTKB|Q23YJ0382 TTHERM_01181990 "Melibiase fam 0.909 0.945 0.547 3.9e-108
UNIPROTKB|Q23DW6381 TTHERM_00043770 "Alpha-galacto 0.901 0.939 0.538 4.4e-107
DICTYBASE|DDB_G0271490385 melA "putative alpha-galactosi 0.909 0.937 0.464 6.5e-90
UNIPROTKB|Q9S2C9 680 Q9S2C9 "Probable secreted alph 0.876 0.511 0.504 6.5e-90
UNIPROTKB|B3PGJ1404 agaA "Alpha-galactosidase A" [ 0.753 0.740 0.520 1.3e-82
TAIR|locus:2150778 AGAL1 "alpha-galactosidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1594 (566.2 bits), Expect = 9.0e-164, P = 9.0e-164
 Identities = 292/397 (73%), Positives = 337/397 (84%)

Query:     1 MVTGVASSRATILGTGADDKLNHNNQPLRRNLLANGLAETPAMGWNSWNHFWGNINEDII 60
             ++T V SSR+  +  G DD     ++ LRR+LL NGL  TP MGWNSWNHF  NI+E +I
Sbjct:    21 VMTMVESSRS--VNNGHDD-----SEILRRHLLTNGLGVTPPMGWNSWNHFSCNIDEKMI 73

Query:    61 KAAADALVSSGLAKLGYIYVNIDDCWGEQDRDEKGNLQARNTTFPSGIKALADYVHGKGL 120
             K  ADALV++GL+KLGY YVNIDDCW E  RD KG+L  + +TFPSGIKA+ADYVH KGL
Sbjct:    74 KETADALVTTGLSKLGYNYVNIDDCWAEISRDSKGSLVPKKSTFPSGIKAVADYVHSKGL 133

Query:   121 KLGIYSSAGYYTCSKQMPGSLGYEDQDAKTFASWGVDYLKYDNCYNDGSKPMDRYPVMTR 180
             KLGIYS AGY+TCSK MPGSLGYE+ DAKTFA WG+DYLKYDNC +DGSKP  RYPVMTR
Sbjct:   134 KLGIYSDAGYFTCSKTMPGSLGYEEHDAKTFAEWGIDYLKYDNCNSDGSKPTVRYPVMTR 193

Query:   181 ALMNTGRPIYYSLCEWGDMHPALWGDKVGNSWRTTGDIEDTWDSMISRADENEAFAKYAR 240
             ALM +GRPI++SLCEWGDMHPALWG  VGNSWRTT DI+DTW SMIS AD NE +A++AR
Sbjct:   194 ALMKSGRPIFHSLCEWGDMHPALWGSPVGNSWRTTNDIKDTWLSMISIADMNEVYAEHAR 253

Query:   241 PGGWNDPDMLEVGNGGMTKDEYIVHFSIWAISKAPLLLGCDVRNMTDDTLEIVGNKEVIA 300
             PGGWNDPDMLEVGNGGMTKDEYIVHFSIWAISKAPLLLGCD+RNMT +T+EIV NKEVIA
Sbjct:   254 PGGWNDPDMLEVGNGGMTKDEYIVHFSIWAISKAPLLLGCDIRNMTKETMEIVANKEVIA 313

Query:   301 VNQDPLGIQAKKVRWEGDQEVWAAPLSGYRIALLLVNRGPWRYAVTAKWEDIGIPPNSVV 360
             +NQDP G+QAKKVR EGD EVWA PLSGYR+ALLL+NRGP R ++TA WEDI IP NS+V
Sbjct:   314 INQDPHGVQAKKVRMEGDLEVWAGPLSGYRVALLLLNRGPSRTSITALWEDIEIPANSIV 373

Query:   361 EARDLWEHKTLTKQFVGNLSAMVGSHACKMYILKPIS 397
             EARDLWEH+TL ++FVGNL+A V SHACK+Y+LKP++
Sbjct:   374 EARDLWEHQTLKQKFVGNLTATVDSHACKLYVLKPVA 410
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA
GO:0004557 "alpha-galactosidase activity" evidence=ISS;IBA
GO:0005576 "extracellular region" evidence=ISM
GO:0005737 "cytoplasm" evidence=IBA
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0009311 "oligosaccharide metabolic process" evidence=IBA
GO:0016139 "glycoside catabolic process" evidence=IBA
GO:0046477 "glycosylceramide catabolic process" evidence=IBA
GO:0005618 "cell wall" evidence=IDA
GO:0048046 "apoplast" evidence=IDA
GO:0009505 "plant-type cell wall" evidence=IDA
TAIR|locus:2150763 AGAL2 "alpha-galactosidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q9FXT4 LOC_Os10g35110 "Alpha-galactosidase" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q7XIV4 OJ1409_C08.26 "Os07g0679300 protein" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2078416 AT3G56310 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q23YJ0 TTHERM_01181990 "Melibiase family protein" [Tetrahymena thermophila SB210 (taxid:312017)] Back     alignment and assigned GO terms
UNIPROTKB|Q23DW6 TTHERM_00043770 "Alpha-galactosidase, putative" [Tetrahymena thermophila SB210 (taxid:312017)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0271490 melA "putative alpha-galactosidase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|Q9S2C9 Q9S2C9 "Probable secreted alpha-galactosidase" [Streptomyces coelicolor A3(2) (taxid:100226)] Back     alignment and assigned GO terms
UNIPROTKB|B3PGJ1 agaA "Alpha-galactosidase A" [Cellvibrio japonicus Ueda107 (taxid:498211)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q42656AGAL_COFAR3, ., 2, ., 1, ., 2, 20.64570.92190.9682N/Ano
Q55B10AGAL_DICDI3, ., 2, ., 1, ., 2, 20.46480.90930.9376yesno
Q90744NAGAB_CHICK3, ., 2, ., 1, ., 4, 90.40.90420.8864yesno
Q66H12NAGAB_RAT3, ., 2, ., 1, ., 4, 90.35730.91430.8746yesno
Q9URZ0AGAL_SCHPO3, ., 2, ., 1, ., 2, 20.40550.89670.8165yesno
Q9FXT4AGAL_ORYSJ3, ., 2, ., 1, ., 2, 20.61980.90930.8657yesno
B3PGJ1AGAL_CELJU3, ., 2, ., 1, ., 2, 20.51910.75560.7425yesno
P14749AGAL_CYATE3, ., 2, ., 1, ., 2, 20.62700.92940.8978N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.220.991
3rd Layer3.2.10.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00002617001
SubName- Full=Chromosome undetermined scaffold_133, whole genome shotgun sequence; (408 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00034182001
RecName- Full=Beta-galactosidase; EC=3.2.1.23; (641 aa)
     •  0.912
GSVIVG00029420001
SubName- Full=Chromosome chr13 scaffold_48, whole genome shotgun sequence; (427 aa)
  •  • •0.902
GSVIVG00002619001
SubName- Full=Chromosome undetermined scaffold_133, whole genome shotgun sequence; (405 aa)
  •  • •0.902
GSVIVG00011770001
SubName- Full=Chromosome undetermined scaffold_337, whole genome shotgun sequence; (405 aa)
  •  • •0.902
GSVIVG00002618001
SubName- Full=Chromosome undetermined scaffold_133, whole genome shotgun sequence; (410 aa)
  •  • •0.902
CWINV
SubName- Full=Chromosome chr9 scaffold_7, whole genome shotgun sequence; (575 aa)
     •  0.899
GSVIVG00033170001
SubName- Full=Chromosome chr5 scaffold_64, whole genome shotgun sequence; (426 aa)
     •  0.899
GSVIVG00032804001
SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (525 aa)
     •  0.899
GSVIVG00032196001
SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (563 aa)
     •  0.899
GSVIVG00030925001
SubName- Full=Chromosome undetermined scaffold_53, whole genome shotgun sequence; (133 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query397
PLN02692412 PLN02692, PLN02692, alpha-galactosidase 0.0
PLN02808386 PLN02808, PLN02808, alpha-galactosidase 0.0
PLN02229427 PLN02229, PLN02229, alpha-galactosidase 0.0
PLN02899 633 PLN02899, PLN02899, alpha-galactosidase 1e-24
PLN03231357 PLN03231, PLN03231, putative alpha-galactosidase; 2e-24
pfam02065395 pfam02065, Melibiase, Melibiase 5e-21
COG3345687 COG3345, GalA, Alpha-galactosidase [Carbohydrate t 4e-06
>gnl|CDD|178295 PLN02692, PLN02692, alpha-galactosidase Back     alignment and domain information 
 Score =  681 bits (1759), Expect = 0.0
 Identities = 304/397 (76%), Positives = 340/397 (85%), Gaps = 4/397 (1%)

Query: 1   MVTGVASSRATILGTGADDKLNHNNQPLRRNLLANGLAETPAMGWNSWNHFWGNINEDII 60
           MV  +  S  ++     + + + +++ LRRNLLANGL  TP MGWNSWNHF   I+E +I
Sbjct: 20  MVMVMVESSRSV----NNKEFDDDSEILRRNLLANGLGITPPMGWNSWNHFSCKIDEKMI 75

Query: 61  KAAADALVSSGLAKLGYIYVNIDDCWGEQDRDEKGNLQARNTTFPSGIKALADYVHGKGL 120
           K  ADALVS+GL+KLGY YVNIDDCW E  RDEKGNL  + +TFPSGIKALADYVH KGL
Sbjct: 76  KETADALVSTGLSKLGYTYVNIDDCWAEIARDEKGNLVPKKSTFPSGIKALADYVHSKGL 135

Query: 121 KLGIYSSAGYYTCSKQMPGSLGYEDQDAKTFASWGVDYLKYDNCYNDGSKPMDRYPVMTR 180
           KLGIYS AGY+TCSK MPGSLG+E+QDAKTFASWG+DYLKYDNC NDGSKP  RYPVMTR
Sbjct: 136 KLGIYSDAGYFTCSKTMPGSLGHEEQDAKTFASWGIDYLKYDNCNNDGSKPTVRYPVMTR 195

Query: 181 ALMNTGRPIYYSLCEWGDMHPALWGDKVGNSWRTTGDIEDTWDSMISRADENEAFAKYAR 240
           ALM  GRPI++SLCEWGDMHPALWG KVGNSWRTT DI DTWDSMISRAD NE +A+ AR
Sbjct: 196 ALMKAGRPIFFSLCEWGDMHPALWGSKVGNSWRTTNDISDTWDSMISRADMNEVYAELAR 255

Query: 241 PGGWNDPDMLEVGNGGMTKDEYIVHFSIWAISKAPLLLGCDVRNMTDDTLEIVGNKEVIA 300
           PGGWNDPDMLEVGNGGMTKDEYIVHFSIWAISKAPLLLGCDVRNMT +T++IV NKEVIA
Sbjct: 256 PGGWNDPDMLEVGNGGMTKDEYIVHFSIWAISKAPLLLGCDVRNMTKETMDIVANKEVIA 315

Query: 301 VNQDPLGIQAKKVRWEGDQEVWAAPLSGYRIALLLVNRGPWRYAVTAKWEDIGIPPNSVV 360
           VNQDPLG+QAKKVR EGD E+WA PLSGYR+ALLL+NRGPWR ++TA W+DIGIP NS+V
Sbjct: 316 VNQDPLGVQAKKVRMEGDLEIWAGPLSGYRVALLLLNRGPWRNSITANWDDIGIPANSIV 375

Query: 361 EARDLWEHKTLTKQFVGNLSAMVGSHACKMYILKPIS 397
           EARDLWEHKTL + FVGNL+A V SHACKMYILKPIS
Sbjct: 376 EARDLWEHKTLKQHFVGNLTATVDSHACKMYILKPIS 412

Length = 412
>gnl|CDD|166449 PLN02808, PLN02808, alpha-galactosidase Back     alignment and domain information
>gnl|CDD|177874 PLN02229, PLN02229, alpha-galactosidase Back     alignment and domain information
>gnl|CDD|178487 PLN02899, PLN02899, alpha-galactosidase Back     alignment and domain information
>gnl|CDD|178770 PLN03231, PLN03231, putative alpha-galactosidase; Provisional Back     alignment and domain information
>gnl|CDD|216861 pfam02065, Melibiase, Melibiase Back     alignment and domain information
>gnl|CDD|225882 COG3345, GalA, Alpha-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 397
PLN02808386 alpha-galactosidase 100.0
PLN02692412 alpha-galactosidase 100.0
PLN02229427 alpha-galactosidase 100.0
KOG2366414 consensus Alpha-D-galactosidase (melibiase) [Carbo 100.0
PLN02899633 alpha-galactosidase 100.0
PLN03231357 putative alpha-galactosidase; Provisional 100.0
PF02065394 Melibiase: Melibiase; InterPro: IPR000111 O-Glycos 100.0
PLN02219 775 probable galactinol--sucrose galactosyltransferase 99.96
PLN02355758 probable galactinol--sucrose galactosyltransferase 99.96
PLN02684750 Probable galactinol--sucrose galactosyltransferase 99.95
PLN02711777 Probable galactinol--sucrose galactosyltransferase 99.95
PF05691747 Raffinose_syn: Raffinose synthase or seed imbibiti 99.94
COG3345687 GalA Alpha-galactosidase [Carbohydrate transport a 99.93
PLN02982865 galactinol-raffinose galactosyltransferase/ghydrol 99.87
cd06592303 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharact 99.76
cd06593308 GH31_xylosidase_YicI YicI alpha-xylosidase is a gl 99.54
cd06589265 GH31 The enzymes of glycosyl hydrolase family 31 ( 99.42
cd06604339 GH31_glucosidase_II_MalA Alpha-glucosidase II (alp 99.3
cd06599317 GH31_glycosidase_Aec37 Glycosyl hydrolase family 3 99.3
cd06598317 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide 99.25
PRK10658665 putative alpha-glucosidase; Provisional 99.22
cd06601332 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) 99.21
cd06600317 GH31_MGAM-like This family includes the following 99.2
cd06595292 GH31_xylosidase_XylS-like This family represents a 99.19
PF01055441 Glyco_hydro_31: Glycosyl hydrolases family 31 ; In 99.19
cd06591319 GH31_xylosidase_XylS XylS is a glycosyl hydrolase 99.17
cd06594317 GH31_glucosidase_YihQ YihQ is a bacterial alpha-gl 99.12
cd06597340 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide 99.12
cd06602339 GH31_MGAM_SI_GAA This family includes the followin 99.09
PF10566273 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: 99.07
cd06603339 GH31_GANC_GANAB_alpha This family includes the clo 99.03
COG1501 772 Alpha-glucosidases, family 31 of glycosyl hydrolas 99.01
PLN02763 978 hydrolase, hydrolyzing O-glycosyl compounds 98.89
PRK10426635 alpha-glucosidase; Provisional 98.79
KOG1065 805 consensus Maltase glucoamylase and related hydrola 97.8
cd06596261 GH31_CPE1046 CPE1046 is an uncharacterized Clostri 97.51
PRK14706639 glycogen branching enzyme; Provisional 96.52
PRK09441479 cytoplasmic alpha-amylase; Reviewed 95.88
PRK10785598 maltodextrin glucosidase; Provisional 95.84
PRK12313633 glycogen branching enzyme; Provisional 95.61
TIGR01515613 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 95.2
PF0853358 Glyco_hydro_42C: Beta-galactosidase C-terminal dom 94.95
PF0280695 Alpha-amylase_C: Alpha amylase, C-terminal all-bet 94.68
PRK147051224 glycogen branching enzyme; Provisional 94.49
PF1043878 Cyc-maltodext_C: Cyclo-malto-dextrinase C-terminal 92.66
PF13200316 DUF4015: Putative glycosyl hydrolase domain 91.82
TIGR02456539 treS_nterm trehalose synthase. Trehalose synthase 90.76
PF0926091 DUF1966: Domain of unknown function (DUF1966); Int 89.26
TIGR02104605 pulA_typeI pullulanase, type I. Pullulan is an unu 88.18
PF02638311 DUF187: Glycosyl hydrolase like GH101; InterPro: I 87.8
TIGR02455688 TreS_stutzeri trehalose synthase, Pseudomonas stut 87.68
COG0296628 GlgB 1,4-alpha-glucan branching enzyme [Carbohydra 86.92
PF14509103 GH97_C: Glycosyl-hydrolase 97 C-terminal, oligomer 86.88
TIGR02456539 treS_nterm trehalose synthase. Trehalose synthase 86.79
PF01120346 Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR00 86.51
smart00812384 Alpha_L_fucos Alpha-L-fucosidase. O-Glycosyl hydro 85.74
TIGR02402542 trehalose_TreZ malto-oligosyltrehalose trehalohydr 84.58
PRK12568730 glycogen branching enzyme; Provisional 84.36
PF07302221 AroM: AroM protein; InterPro: IPR010843 This famil 83.25
PF1194189 DUF3459: Domain of unknown function (DUF3459); Int 82.12
cd02931382 ER_like_FMN Enoate reductase (ER)-like FMN-binding 80.19
PRK05402726 glycogen branching enzyme; Provisional 80.01
>PLN02808 alpha-galactosidase Back     alignment and domain information 
Probab=100.00  E-value=1.4e-107  Score=806.64  Aligned_cols=367  Identities=68%  Similarity=1.211  Sum_probs=353.8

Q ss_pred             ccccccCCCCCCCceEEechhhhccCCCHHHHHHHHHHHHHcCCcccCceEEEeCCccccCCCCCCCCeeecCCCCCCcH
Q 039407           29 RRNLLANGLAETPAMGWNSWNHFWGNINEDIIKAAADALVSSGLAKLGYIYVNIDDCWGEQDRDEKGNLQARNTTFPSGI  108 (397)
Q Consensus        29 ~~~~~~~g~~~~pp~GwnSW~~~~~~i~e~~i~~~ad~l~~~gl~~~Gy~~i~iDdgW~~~~rd~~G~~~~~~~~FP~Gl  108 (397)
                      ...+++||++++||||||||+.|+|+|||+.|+++|++|++.||+++||+||+|||||+...||++|+|+||++|||+||
T Consensus        20 ~~~~~~ngla~tPpmGWnsW~~~~~~i~e~~i~~~a~~mv~~Gl~~~Gy~yv~iDd~W~~~~rd~~G~~~~d~~rFP~G~   99 (386)
T PLN02808         20 SRNLLDNGLGLTPQMGWNSWNHFQCNINETLIKQTADAMVSSGLAALGYKYINLDDCWAELKRDSQGNLVPKASTFPSGI   99 (386)
T ss_pred             hhhcccCcccCCCcceEEchHHHCCCCCHHHHHHHHHHHHHcchHHhCCEEEEEcCCcCCCCcCCCCCEeeChhhcCccH
Confidence            34567899999999999999999999999999999999999999999999999999999988999999999999999999


Q ss_pred             HHHHHHHHhCCCeEEEEeeCCccccCCCCCCccchHHHHHHHHHhcCCcEEEeeCCCCCCCCccchHHHHHHHHHhcCCC
Q 039407          109 KALADYVHGKGLKLGIYSSAGYYTCSKQMPGSLGYEDQDAKTFASWGVDYLKYDNCYNDGSKPMDRYPVMTRALMNTGRP  188 (397)
Q Consensus       109 ~~l~~~i~~~Glk~Giw~~pg~~~c~~~~pg~~~~~~~~~~~~~~wGvdylK~D~~~~~~~~~~~~y~~m~~al~~~g~~  188 (397)
                      |+|+||||++|||||||.++|..+|..++||+++|++.|+++|++|||||||+|+|+.......++|..|++||+++|||
T Consensus       100 ~~lad~iH~~GlkfGiy~~~G~~tC~~~~pGs~~~e~~DA~~fA~WGvDylK~D~C~~~~~~~~~~y~~m~~AL~~tGRp  179 (386)
T PLN02808        100 KALADYVHSKGLKLGIYSDAGTLTCSKTMPGSLGHEEQDAKTFASWGIDYLKYDNCENTGTSPQERYPKMSKALLNSGRP  179 (386)
T ss_pred             HHHHHHHHHCCCceEEEecCCccccCCCCCcchHHHHHHHHHHHHhCCCEEeecCcCCCCccHHHHHHHHHHHHHHhCCC
Confidence            99999999999999999999999998888999999999999999999999999999877666788999999999999999


Q ss_pred             eEEEecCCCCCCcccccccccCeEeecCCCCCchHHHHHHHHhhccchhhcCCCCCCCCCCcccCCCCCCHHHHHHHHHH
Q 039407          189 IYYSLCEWGDMHPALWGDKVGNSWRTTGDIEDTWDSMISRADENEAFAKYARPGGWNDPDMLEVGNGGMTKDEYIVHFSI  268 (397)
Q Consensus       189 i~~~~c~~g~~~~~~~~~~~~~~~Ris~D~~~~w~~~~~~~~~~~~~~~~~~~~~~nDpD~l~vg~~~lt~~e~rt~~~l  268 (397)
                      |+|++|+||...|..|..+++|+||++.|+.+.|.++.++++.+..++.+++||+|||||||+||+.++|.+|+|+||+|
T Consensus       180 i~~slc~wg~~~p~~w~~~~~n~WR~s~Di~d~W~~v~~~~~~~~~~~~~agPG~wnDpDML~vGn~glt~~E~rthfsL  259 (386)
T PLN02808        180 IFFSLCEWGQEDPATWAGDIGNSWRTTGDIQDNWDSMTSRADQNDRWASYARPGGWNDPDMLEVGNGGMTTEEYRSHFSI  259 (386)
T ss_pred             eEEEecCCCCCCHHHHHHhhcCcccccCCcccchhhHHHHHHhhhhhHhhcCCCCCCCCCeeeECCCCCCHHHHHHHHHH
Confidence            99999999988888999899999999999999999999999988899999999999999999999999999999999999


Q ss_pred             HHHhcCCeeeccCCCCCChhHHhhhcChhhhhhccCCCCCceEEeeecCCeeEEEEEcCCCCEEEEEEEcCCCceEEEEe
Q 039407          269 WAISKAPLLLGCDVRNMTDDTLEIVGNKEVIAVNQDPLGIQAKKVRWEGDQEVWAAPLSGYRIALLLVNRGPWRYAVTAK  348 (397)
Q Consensus       269 wa~~gspL~is~dl~~l~~~~~~ll~N~~liainqd~lg~~~~~v~~~~~~~vw~~~l~~g~~~va~fN~~~~~~~~~i~  348 (397)
                      |||++|||++|+||++++++.++||+|+||||||||++|.+++++..+++.+||.+++++|+++|+|||+++++++++++
T Consensus       260 Wam~~SPLiiG~DL~~~~~~~l~iLtNkevIAINQD~lG~~~~~v~~~~~~~vW~k~L~~g~~aVal~N~~~~~~~~~~~  339 (386)
T PLN02808        260 WALAKAPLLIGCDIRSMDNETFELLSNKEVIAVNQDKLGVQGKKVKKDGDLEVWAGPLSKKRVAVVLWNRGSSRATITAR  339 (386)
T ss_pred             HHHHhCcceecCCcCcCCHHHHHHhcCHHHHhhcCCccccCcEEEEecCCeEEEEEECCCCCEEEEEEECCCCCEEEEEE
Confidence            99999999999999999999999999999999999999999999998889999999999999999999999999999999


Q ss_pred             ccccCCCCCCeeEEEEcCCCcccceeeeeeEEEEEcCCcEEEEEEEeC
Q 039407          349 WEDIGIPPNSVVEARDLWEHKTLTKQFVGNLSAMVGSHACKMYILKPI  396 (397)
Q Consensus       349 l~~lGl~~~~~~~v~DlWsg~~~~g~~~g~~~~~L~ph~~~ll~l~p~  396 (397)
                      |++|||.....|+|||||+|+++ +.++++++++|+||+|+||||+|.
T Consensus       340 ~~~lgl~~~~~~~vrDlWs~~~~-g~~~~~~~~~v~pHg~~~~rlt~~  386 (386)
T PLN02808        340 WSDIGLNSSAVVNARDLWAHSTQ-SSVKGQLSALVESHACKMYVLTPR  386 (386)
T ss_pred             HHHhCCCCCCceEEEECCCCCcc-CcccceEEEEECCceEEEEEEeCC
Confidence            99999987667999999999998 788999999999999999999984

>PLN02692 alpha-galactosidase Back     alignment and domain information
>PLN02229 alpha-galactosidase Back     alignment and domain information
>KOG2366 consensus Alpha-D-galactosidase (melibiase) [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02899 alpha-galactosidase Back     alignment and domain information
>PLN03231 putative alpha-galactosidase; Provisional Back     alignment and domain information
>PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PLN02219 probable galactinol--sucrose galactosyltransferase 2 Back     alignment and domain information
>PLN02355 probable galactinol--sucrose galactosyltransferase 1 Back     alignment and domain information
>PLN02684 Probable galactinol--sucrose galactosyltransferase Back     alignment and domain information
>PLN02711 Probable galactinol--sucrose galactosyltransferase Back     alignment and domain information
>PF05691 Raffinose_syn: Raffinose synthase or seed imbibition protein Sip1; InterPro: IPR008811 This family consists of several raffinose synthase proteins, also known as seed imbibition (Sip1) proteins Back     alignment and domain information
>COG3345 GalA Alpha-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02982 galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds Back     alignment and domain information
>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase Back     alignment and domain information
>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose Back     alignment and domain information
>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase Back     alignment and domain information
>cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities Back     alignment and domain information
>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37 Back     alignment and domain information
>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY Back     alignment and domain information
>PRK10658 putative alpha-glucosidase; Provisional Back     alignment and domain information
>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end Back     alignment and domain information
>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II Back     alignment and domain information
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus Back     alignment and domain information
>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate Back     alignment and domain information
>cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride Back     alignment and domain information
>cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ Back     alignment and domain information
>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase Back     alignment and domain information
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB) Back     alignment and domain information
>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02763 hydrolase, hydrolyzing O-glycosyl compounds Back     alignment and domain information
>PRK10426 alpha-glucosidase; Provisional Back     alignment and domain information
>KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd06596 GH31_CPE1046 CPE1046 is an uncharacterized Clostridium perfringens protein with a glycosyl hydrolase family 31 (GH31) domain Back     alignment and domain information
>PRK14706 glycogen branching enzyme; Provisional Back     alignment and domain information
>PRK09441 cytoplasmic alpha-amylase; Reviewed Back     alignment and domain information
>PRK10785 maltodextrin glucosidase; Provisional Back     alignment and domain information
>PRK12313 glycogen branching enzyme; Provisional Back     alignment and domain information
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase Back     alignment and domain information
>PF08533 Glyco_hydro_42C: Beta-galactosidase C-terminal domain; InterPro: IPR013739 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF02806 Alpha-amylase_C: Alpha amylase, C-terminal all-beta domain; InterPro: IPR006048 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK14705 glycogen branching enzyme; Provisional Back     alignment and domain information
>PF10438 Cyc-maltodext_C: Cyclo-malto-dextrinase C-terminal domain; InterPro: IPR019492 This domain is at the very C terminus of cyclo-malto-dextrinase proteins and consists of 8 beta strands, is largely globular and appears to help stabilise the active sites created by upstream domains, IPR015171 from INTERPRO, and IPR006047 from INTERPRO Back     alignment and domain information
>PF13200 DUF4015: Putative glycosyl hydrolase domain Back     alignment and domain information
>TIGR02456 treS_nterm trehalose synthase Back     alignment and domain information
>PF09260 DUF1966: Domain of unknown function (DUF1966); InterPro: IPR015340 Alpha-amylase is classified as family 13 of the glycosyl hydrolases and is present in archaea, bacteria, plants and animals Back     alignment and domain information
>TIGR02104 pulA_typeI pullulanase, type I Back     alignment and domain information
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function Back     alignment and domain information
>TIGR02455 TreS_stutzeri trehalose synthase, Pseudomonas stutzeri type Back     alignment and domain information
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF14509 GH97_C: Glycosyl-hydrolase 97 C-terminal, oligomerisation; PDB: 3A24_A 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A Back     alignment and domain information
>TIGR02456 treS_nterm trehalose synthase Back     alignment and domain information
>PF01120 Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR000933 O-Glycosyl hydrolases 3 Back     alignment and domain information
>smart00812 Alpha_L_fucos Alpha-L-fucosidase Back     alignment and domain information
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase Back     alignment and domain information
>PRK12568 glycogen branching enzyme; Provisional Back     alignment and domain information
>PF07302 AroM: AroM protein; InterPro: IPR010843 This family consists of several bacterial and archaeal AroM proteins Back     alignment and domain information
>PF11941 DUF3459: Domain of unknown function (DUF3459); InterPro: IPR022567 This functionally uncharacterised domain is found in bacteria Back     alignment and domain information
>cd02931 ER_like_FMN Enoate reductase (ER)-like FMN-binding domain Back     alignment and domain information
>PRK05402 glycogen branching enzyme; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query397
1uas_A362 Crystal Structure Of Rice Alpha-Galactosidase Lengt 1e-133
3a5v_A397 Crystal Structure Of Alpha-Galactosidase I From Mor 9e-88
1ktb_A405 The Structure Of Alpha-N-Acetylgalactosaminidase Le 1e-73
1r46_A398 Structure Of Human Alpha-galactosidase Length = 398 4e-68
3lx9_A404 Interconversion Of Human Lysosomal Enzyme Specifici 6e-68
3hg3_A404 Human Alpha-Galactosidase Catalytic Mechanism 2. Su 3e-67
3lrk_A479 Structure Of Alfa-Galactosidase (Mel1) From Sacchar 9e-65
3lrm_A479 Structure Of Alfa-Galactosidase From Saccharomyces 8e-64
1szn_A417 The Structure Of Alpha-Galactosidase Length = 417 7e-60
3h53_A400 Crystal Structure Of Human Alpha-N-Acetylgalactosam 3e-59
3a21_A 614 Crystal Structure Of Streptomyces Avermitilis Beta- 4e-57
3cc1_A433 Crystal Structure Of A Putative Alpha-N-Acetylgalac 8e-22
2xn0_A732 Structure Of Alpha-Galactosidase From Lactobacillus 2e-05
2xn2_A732 Structure Of Alpha-Galactosidase From Lactobacillus 2e-05
>pdb|1UAS|A Chain A, Crystal Structure Of Rice Alpha-Galactosidase Length = 362 Back     alignment and structure 
Iteration: 1

 Score =  471 bits (1213), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 225/363 (61%), Positives = 267/363 (73%), Gaps = 2/363 (0%)
Query: 33  LANGLAETPAMGWNSWNHFWGNINEDIIKAAADALVSSGLAKLGYIYVNIDDCWGEQDRD 92
             NGL  TP MGWNSWNHF+  INE II+  ADALV++GLAKLGY YVNIDDCW E  RD
Sbjct: 1   FENGLGRTPQMGWNSWNHFYCGINEQIIRETADALVNTGLAKLGYQYVNIDDCWAEYSRD 60
Query: 93  EKGNLQARNTTFPSGIKALADYVHGKGLKLGIYSSAGYYTCSKQMPGSLGYEDQDAKTFA 152
            +GN      TFPSGIKALADYVH KGLKLGIYS AG  TCS +MPGSL +E+QD KTFA
Sbjct: 61  SQGNFVPNRQTFPSGIKALADYVHAKGLKLGIYSDAGSQTCSNKMPGSLDHEEQDVKTFA 120
Query: 153 SWGVDYLKYDNCYNDGSKPMDRYPVMTRALMNTGRPIYYSLCEWGDMHPALWGDKVGNSW 212
           SWGVDYLKYDNC + G   M+RY  M+ A+   G+ I++SLCEWG  +PA W  ++GNSW
Sbjct: 121 SWGVDYLKYDNCNDAGRSVMERYTRMSNAMKTYGKNIFFSLCEWGKENPATWAGRMGNSW 180
Query: 213 RTTGDIEDTWDSMISRADENEAFAKYARPGGWNDPDMLEVGNGGMTKDEYIVHFSIWAIS 272
           RTTGDI D W SM SRADEN+ +A YA PGGWNDPDMLEVGNGGM++ EY  HFSIWA++
Sbjct: 181 RTTGDIADNWGSMTSRADENDQWAAYAGPGGWNDPDMLEVGNGGMSEAEYRSHFSIWALA 240
Query: 273 KAPLLLGCDVRNMTDDTLEIVGNKEVIAVNQDPLGIQAKKVRWEGDQEVWAAPLSGYRIA 332
           KAPLL+GCDVR+M+  T  I+ N EVIAVNQD LG+Q KKV+ +   EVWA PLS  R A
Sbjct: 241 KAPLLIGCDVRSMSQQTKNILSNSEVIAVNQDSLGVQGKKVQSDNGLEVWAGPLSNNRKA 300
Query: 333 LLLVNRGPWRYAVTAKWEDIGIPPNSVVEARDLWEHKTLTKQFVGNLSAMVGSHACKMYI 392
           ++L NR  ++  +TA W +IG+  +  V ARDLW H +   Q  G +SA V  H CKMY+
Sbjct: 301 VVLWNRQSYQATITAHWSNIGLAGSVAVTARDLWAHSSFAAQ--GQISASVAPHDCKMYV 358
Query: 393 LKP 395
           L P
Sbjct: 359 LTP 361
>pdb|3A5V|A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea Length = 397 Back     alignment and structure
>pdb|1KTB|A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase Length = 405 Back     alignment and structure
>pdb|1R46|A Chain A, Structure Of Human Alpha-galactosidase Length = 398 Back     alignment and structure
>pdb|3LX9|A Chain A, Interconversion Of Human Lysosomal Enzyme Specificities Length = 404 Back     alignment and structure
>pdb|3HG3|A Chain A, Human Alpha-Galactosidase Catalytic Mechanism 2. Substrate Bound Length = 404 Back     alignment and structure
>pdb|3LRK|A Chain A, Structure Of Alfa-Galactosidase (Mel1) From Saccharomyces Cerevisiae Length = 479 Back     alignment and structure
>pdb|3LRM|A Chain A, Structure Of Alfa-Galactosidase From Saccharomyces Cerevisiae With Raffinose Length = 479 Back     alignment and structure
>pdb|1SZN|A Chain A, The Structure Of Alpha-Galactosidase Length = 417 Back     alignment and structure
>pdb|3H53|A Chain A, Crystal Structure Of Human Alpha-N-Acetylgalactosaminidase Length = 400 Back     alignment and structure
>pdb|3A21|A Chain A, Crystal Structure Of Streptomyces Avermitilis Beta-L- Arabinopyranosidase Length = 614 Back     alignment and structure
>pdb|3CC1|A Chain A, Crystal Structure Of A Putative Alpha-N-Acetylgalactosaminidase (Bh1870) From Bacillus Halodurans C-125 At 2.00 A Resolution Length = 433 Back     alignment and structure
>pdb|2XN0|A Chain A, Structure Of Alpha-Galactosidase From Lactobacillus Acidophilus Ncfm, Ptcl4 Derivative Length = 732 Back     alignment and structure
>pdb|2XN2|A Chain A, Structure Of Alpha-Galactosidase From Lactobacillus Acidophilus Ncfm With Galactose Length = 732 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query397
3a21_A 614 Putative secreted alpha-galactosidase; beta-alpha- 1e-143
1uas_A362 Alpha-galactosidase; TIM-barrel, beta-alpha-barrel 1e-141
3lrk_A479 Alpha-galactosidase 1; tetramer, GH27, glycoprotei 1e-134
3a5v_A397 Alpha-galactosidase; beta/alpha barrel, N-glycosyl 1e-134
1szn_A417 Alpha-galactosidase; (beta/alpha)8 barrel,TWO doma 1e-132
1ktb_A405 Alpha-N-acetylgalactosaminidase; glycoprotein, (be 1e-128
3hg3_A404 Alpha-galactosidase A; glycoprotein, carbohydrate- 1e-127
3cc1_A433 BH1870 protein, putative alpha-N-acetylgalactosami 1e-113
2xn2_A732 Alpha-galactosidase; hydrolase, glycosidase; HET: 3e-27
3mi6_A745 Alpha-galactosidase; NESG, structural genomics, PS 9e-20
1zy9_A564 Alpha-galactosidase; TM1192, struc genomics, joint 8e-19
2yfo_A720 Alpha-galactosidase-sucrose kinase agask; hydrolas 7e-16
3a24_A641 Alpha-galactosidase; glycoside hydrolase family 97 8e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-04
>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A* Length = 614 Back     alignment and structure
 Score =  419 bits (1077), Expect = e-143
 Identities = 126/348 (36%), Positives = 175/348 (50%), Gaps = 23/348 (6%)

Query: 33  LANGLAETPAMGWNSWNHFWGNINEDIIKAAADALVSSGLAKLGYIYVNIDDCWGEQDRD 92
                  +  MGW SWN F   I+  +IK   DA V++GL   GY Y+NID+ W +  RD
Sbjct: 4   TRQITVPSAPMGWASWNSFAAKIDYSVIKKQVDAFVAAGLPAAGYTYINIDEGWWQGTRD 63

Query: 93  EKGNLQARNTTFPSGIKALADYVHGKGLKLGIYSSAGYYTCS---------KQMPGSLGY 143
             GN+      +P G+ A+  Y+H KGLK GIY+ AG   C              GS G+
Sbjct: 64  SAGNITVDTAEWPGGMSAITAYIHSKGLKAGIYTDAGKDGCGYYYPTGRPAAPGSGSEGH 123

Query: 144 EDQDAKTFASWGVDYLKYDNCYNDG--SKPMDRYPVMT----RALMNTGRPIYYSLCEWG 197
            DQD   F++WG D++K D C  D         Y  ++    RA   TGRP+  S+C WG
Sbjct: 124 YDQDMLQFSTWGFDFVKVDWCGGDAEGLDAATTYKSISDAVGRAAATTGRPLTLSICNWG 183

Query: 198 DMHPALWGDKVGNSWRTTGDIE-----DTWDSMISRADENEAFAKYARPGGWNDPDMLEV 252
             +P  W       WRT+ DI       +  S++S  D+          G +NDPDML V
Sbjct: 184 YQNPWNWAAGQAPLWRTSTDIIYYGNQPSMTSLLSNFDQT-LHPTAQHTGYYNDPDMLMV 242

Query: 253 GNGGMTKDEYIVHFSIWAISKAPLLLGCDVRNMTDDTLEIVGNKEVIAVNQDPLGIQAKK 312
           G  G T  +   H ++WAIS APLL G D+  MT +T  I+ N EVIAV+QD  G+Q  K
Sbjct: 243 GMDGFTAAQNRTHMNLWAISGAPLLAGNDLTTMTSETAGILKNPEVIAVDQDSRGLQGVK 302

Query: 313 VRWEGD-QEVWAAPLSGY-RIALLLVNRGPWRYAVTAKWEDIGIPPNS 358
           V  +    + +   LSG    A++L+NR    + +T +W D+G+   S
Sbjct: 303 VAEDTTGLQAYGKVLSGTGNRAVVLLNRTSAAHDITVRWSDLGLTNAS 350
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1 Length = 362 Back     alignment and structure
>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A* Length = 479 Back     alignment and structure
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea} Length = 397 Back     alignment and structure
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A* Length = 417 Back     alignment and structure
>1ktb_A Alpha-N-acetylgalactosaminidase; glycoprotein, (beta/alpha)8 barrel, hydrolase; HET: NAG; 1.90A {Gallus gallus} SCOP: b.71.1.1 c.1.8.1 PDB: 1ktc_A* 3h55_A* 3h54_A* 3h53_A* 3igu_A* Length = 405 Back     alignment and structure
>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A* Length = 404 Back     alignment and structure
>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125} Length = 433 Back     alignment and structure
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A* Length = 732 Back     alignment and structure
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} Length = 745 Back     alignment and structure
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 Length = 564 Back     alignment and structure
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* Length = 720 Back     alignment and structure
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron} Length = 641 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query397
3hg3_A404 Alpha-galactosidase A; glycoprotein, carbohydrate- 100.0
3lrk_A479 Alpha-galactosidase 1; tetramer, GH27, glycoprotei 100.0
3a5v_A397 Alpha-galactosidase; beta/alpha barrel, N-glycosyl 100.0
1uas_A362 Alpha-galactosidase; TIM-barrel, beta-alpha-barrel 100.0
1szn_A417 Alpha-galactosidase; (beta/alpha)8 barrel,TWO doma 100.0
4do4_A400 Alpha-N-acetylgalactosaminidase; pharmacological c 100.0
3cc1_A433 BH1870 protein, putative alpha-N-acetylgalactosami 100.0
3a21_A 614 Putative secreted alpha-galactosidase; beta-alpha- 100.0
1zy9_A564 Alpha-galactosidase; TM1192, struc genomics, joint 100.0
4fnq_A729 Alpha-galactosidase AGAB; glycoside hydrolase, hyd 100.0
2xn2_A732 Alpha-galactosidase; hydrolase, glycosidase; HET: 100.0
2yfo_A720 Alpha-galactosidase-sucrose kinase agask; hydrolas 100.0
3mi6_A745 Alpha-galactosidase; NESG, structural genomics, PS 100.0
3a24_A641 Alpha-galactosidase; glycoside hydrolase family 97 99.78
2f2h_A 773 Putative family 31 glucosidase YICI; BETA8alpha8 b 99.51
2g3m_A693 Maltase, alpha-glucosidase; hydrolase, glycoside h 99.49
2d73_A738 Alpha-glucosidase SUSB; glycoside hydrolase family 99.35
4ba0_A 817 Alpha-glucosidase, putative, ADG31B; hydrolase; HE 99.34
3nsx_A 666 Alpha-glucosidase; structural genomics, PSI-2, pro 99.23
2xvl_A 1020 Alpha-xylosidase, putative, XYL31A; hydrolase, gly 99.2
3lpp_A 898 Sucrase-isomaltase; glycoside hydrolase family 31, 99.16
3l4y_A 875 Maltase-glucoamylase, intestinal; glycoside hydrol 99.15
3zss_A695 Putative glucanohydrolase PEP1A; alpha-glucan bios 98.56
3top_A 908 Maltase-glucoamylase, intestinal; membrane, hydrol 98.53
2x2h_A 1027 Alpha-1,4-glucan lyase isozyme 1; anhydrofructose 98.09
1j0h_A588 Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 97.73
3edf_A601 FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c 97.7
1ji1_A637 Alpha-amylase I; beta/alpha barrel, hydrolase; 1.6 97.61
1wzl_A585 Alpha-amylase II; pullulan, GH-13, alpha-amylase f 97.6
1ua7_A422 Alpha-amylase; beta-alpha-barrels, acarbose, greek 97.51
1ea9_C583 Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A 97.45
2wc7_A488 Alpha amylase, catalytic region; CD/PUL-hydrolyzin 97.2
4aee_A696 Alpha amylase, catalytic region; hydrolase, hypert 96.92
3k1d_A722 1,4-alpha-glucan-branching enzyme; mycobacterium t 96.79
3dhu_A449 Alpha-amylase; structural genomics, hydrolase, gly 96.54
1d3c_A 686 Cyclodextrin glycosyltransferase; alpha-amylase, p 94.94
1cyg_A 680 Cyclodextrin glucanotransferase; glycosyltransfera 94.48
3m07_A618 Putative alpha amylase; IDP00968, csgid, structura 93.73
3bmv_A 683 Cyclomaltodextrin glucanotransferase; glycosidase, 92.32
3ues_A478 Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydr 92.2
2aaa_A484 Alpha-amylase; glycosidase; 2.10A {Aspergillus nig 91.74
1m7x_A617 1,4-alpha-glucan branching enzyme; alpha/beta barr 91.29
3vgf_A558 Malto-oligosyltrehalose trehalohydrolase; alpha/be 91.29
2guy_A478 Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; 90.97
2bhu_A602 Maltooligosyltrehalose trehalohydrolase; alpha-amy 90.68
4aie_A549 Glucan 1,6-alpha-glucosidase; hydrolase, glycoside 90.26
1mxg_A435 Alpha amylase; hyperthermostable, family 13 glycos 89.91
2dh2_A424 4F2 cell-surface antigen heavy chain; TIM-barrel, 88.95
2z1k_A475 (NEO)pullulanase; hydrolase, structural genomics, 88.09
2wvv_A450 Alpha-L-fucosidase; alpha-L-fucose, hydrolase, gly 87.8
4axn_A328 Chitinase C1; hydrolase; 1.68A {Serratia marcescen 87.32
3ucq_A655 Amylosucrase; thermostability, amylose synthesis, 85.99
3eyp_A469 Putative alpha-L-fucosidase; structural genomics, 85.22
2z1k_A475 (NEO)pullulanase; hydrolase, structural genomics, 84.83
1qw9_A502 Arabinosidase, alpha-L-arabinofuranosidase; hydrol 84.44
2vrq_A496 Alpha-L-arabinofuranosidase; hydrolase, glycosidas 84.24
4gqr_A496 Pancreatic alpha-amylase; glycosyl hydrolase, diab 84.08
2c7f_A513 Alpha-L-arabinofuranosidase; glycosidase, xylan, a 83.41
2yih_A524 CEL44C, xyloglucanase; hydrolase, GH44, endo-gluca 82.53
3ucq_A 655 Amylosucrase; thermostability, amylose synthesis, 82.43
3faw_A 877 Reticulocyte binding protein; TIM barrel, beta bar 82.15
2e4t_A519 Endoglucanase, xyloglucanase; TIM barrel, TIM-like 81.76
3n12_A333 Chitinase A, chinctu2; zinc atoms, complex, hydrol 80.85
1hvx_A515 Alpha-amylase; hydrolase, glycosyltransferase, the 80.31
1g5a_A628 Amylosucrase; glycosyltransferase, glycoside hydro 80.23
3gza_A443 Putative alpha-L-fucosidase; NP_812709.1, structur 80.19
>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A* Back     alignment and structure
Probab=100.00  E-value=1.2e-101  Score=772.44  Aligned_cols=361  Identities=41%  Similarity=0.729  Sum_probs=335.5

Q ss_pred             ccCCCCCCCceEEechhhhccC----------CCHHHHHHHHHHHHHcCCcccCceEEEeCCccccCCCCCCCCeeecCC
Q 039407           33 LANGLAETPAMGWNSWNHFWGN----------INEDIIKAAADALVSSGLAKLGYIYVNIDDCWGEQDRDEKGNLQARNT  102 (397)
Q Consensus        33 ~~~g~~~~pp~GwnSW~~~~~~----------i~e~~i~~~ad~l~~~gl~~~Gy~~i~iDdgW~~~~rd~~G~~~~~~~  102 (397)
                      ++||++++||||||||+.|+|+          |||+.|+++|++|+++||+++||+||+||||||...||.+|+|++|++
T Consensus         1 l~ngla~tppmGWnsW~~~~~~~d~~~~~~~~i~e~~i~~~ad~~~~~Gl~~~G~~~~~iDDgW~~~~rd~~G~~~~~~~   80 (404)
T 3hg3_A            1 LDNGLARTPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQ   80 (404)
T ss_dssp             CCSSCCSSCCEEEESHHHHTTCCCTTTCTTTSSSHHHHHHHHHHHHHTTHHHHTCCEEECCSSCBCSSCCTTSCCCBCTT
T ss_pred             CCCCCCCCCceEEEcHhhhccCccccccccCCcCHHHHHHHHHHHHHCCcHhhCCeEEEECCCcCCCCCCCCCCeeeChh
Confidence            4799999999999999999998          799999999999999999999999999999999988999999999999


Q ss_pred             CCCCcHHHHHHHHHhCCCeEEEEeeCCccccCCCCCCccchHHHHHHHHHhcCCcEEEeeCCCCCCCC-ccchHHHHHHH
Q 039407          103 TFPSGIKALADYVHGKGLKLGIYSSAGYYTCSKQMPGSLGYEDQDAKTFASWGVDYLKYDNCYNDGSK-PMDRYPVMTRA  181 (397)
Q Consensus       103 ~FP~Gl~~l~~~i~~~Glk~Giw~~pg~~~c~~~~pg~~~~~~~~~~~~~~wGvdylK~D~~~~~~~~-~~~~y~~m~~a  181 (397)
                      |||+||++|+++||++|||||||+++|..+|.++ ||+++|++.++++|++|||||||+|+|+..... ..++|+.|++|
T Consensus        81 kFP~Gl~~l~~~ih~~Glk~Giw~~~g~~tC~~~-pGs~~~~~~da~~fa~WGvDylK~D~C~~~~~~~~~~~y~~m~~A  159 (404)
T 3hg3_A           81 RFPHGIRQLANYVHSKGLKLGIYADVGNKTCAGF-PGSFGYYDIDAQTFADWGVDLLKFAGCYCDSLENLADGYKHMSLA  159 (404)
T ss_dssp             TSTTHHHHHHHHHHHTTCEEEEEEESSSBCTTSS-BCCTTCHHHHHHHHHHHTCCEEEEECCSCSCHHHHHHHHHHHHHH
T ss_pred             hcCCCHHHHHHHHHHCCCeeEEEecCCccccCCC-CccHHHHHHHHHHHHHhCCcEEEecCcCCCcchhHHHHHHHHHHH
Confidence            9999999999999999999999999999999876 999999999999999999999999999875443 46799999999


Q ss_pred             HHhcCCCeEEEecCCCCCC-----c-ccccccccCeEeecCCCCCchHHHHHHHHh----hccchhhcCCCCCCCCCCcc
Q 039407          182 LMNTGRPIYYSLCEWGDMH-----P-ALWGDKVGNSWRTTGDIEDTWDSMISRADE----NEAFAKYARPGGWNDPDMLE  251 (397)
Q Consensus       182 l~~~g~~i~~~~c~~g~~~-----~-~~~~~~~~~~~Ris~D~~~~w~~~~~~~~~----~~~~~~~~~~~~~nDpD~l~  251 (397)
                      |+++||||+|+ |+|+...     | ..+..+++|+||+++|+.+.|+++..+++.    +..++.+++||+|||||||+
T Consensus       160 L~~tGRpi~~s-c~w~~~~~~~~~~~~~~~~~~~n~WR~~~Di~d~W~sv~~i~~~~~~~~~~~~~~agpG~wnDpDML~  238 (404)
T 3hg3_A          160 LNRTGRSIVYS-CEWPLYMWPFQKPNYTEIRQYCNHWRNFADIDDSWKSIKSILDWTSFNQERIVDVAGPGGWNDPDMLV  238 (404)
T ss_dssp             HHHTTCCCEEE-ECTGGGGTTTSCCCHHHHHHHCSEEECSCCCCSSHHHHHHHHHHHHHTHHHHTTTCBTTBEEECCCBC
T ss_pred             HHhcCCCEEEE-eCCCcccccccccchHHHhhhCcEEEecCCcCcchHHHHHHHHHHhhhhhhhHhhcCCCCcCCCccee
Confidence            99999999999 9986311     1 112247899999999999999999988874    34678899999999999999


Q ss_pred             cCCCCCCHHHHHHHHHHHHHhcCCeeeccCCCCCChhHHhhhcChhhhhhccCCCCCceEEeeecCCeeEEEEEcCCCCE
Q 039407          252 VGNGGMTKDEYIVHFSIWAISKAPLLLGCDVRNMTDDTLEIVGNKEVIAVNQDPLGIQAKKVRWEGDQEVWAAPLSGYRI  331 (397)
Q Consensus       252 vg~~~lt~~e~rt~~~lwa~~gspL~is~dl~~l~~~~~~ll~N~~liainqd~lg~~~~~v~~~~~~~vw~~~l~~g~~  331 (397)
                      ||+.+||.+|+|+||++|||++||||+|+||+++++++++||+|+||||||||++|+|++++...++.+||.+++++|++
T Consensus       239 vGn~glT~~E~rthfslWai~~sPLiiG~Dl~~~~~~tl~iLtN~evIAinQD~lG~q~~~v~~~~~~~VW~~~l~~g~~  318 (404)
T 3hg3_A          239 IGNFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQDPLGKQGYQLRQGDNFEVWERPLSGLAW  318 (404)
T ss_dssp             TTSSSCCHHHHHHHHHHHHHTTCCEEECSCTTSCCHHHHHHHTCHHHHHHHTCTTCCCCEEEEEETTEEEEEEECSTTCE
T ss_pred             cCCCCCCHHHHHHHHHHHHHhcCceEecCCcccCCHHHHHHhcCHHHHhhhccccCCcceEEEecCCeEEEEEECCCCCE
Confidence            99999999999999999999999999999999999999999999999999999999999999988899999999999999


Q ss_pred             EEEEEEcCC--CceEEEEeccccCC---CCCCeeEEEEcCCCcccceeee--eeEEEEEcCCcEEEEEEEeC
Q 039407          332 ALLLVNRGP--WRYAVTAKWEDIGI---PPNSVVEARDLWEHKTLTKQFV--GNLSAMVGSHACKMYILKPI  396 (397)
Q Consensus       332 ~va~fN~~~--~~~~~~i~l~~lGl---~~~~~~~v~DlWsg~~~~g~~~--g~~~~~L~ph~~~ll~l~p~  396 (397)
                      ||+|||+++  .+++++++|++|||   .++..|+|||||+|+++ +.++  ++|+++|+||+|+||||+|.
T Consensus       319 aValfN~~~~~~~~~vtv~~~~lGl~~~~~~~~~~vrDLW~~~~l-g~~~~~~~~~~~V~pHg~~llrlt~~  389 (404)
T 3hg3_A          319 AVAMINRQEIGGPRSYTIAVASLGKGVACNPACFITQLLPVKRKL-GFYEWTSRLRSHINPTGTVLLQLENT  389 (404)
T ss_dssp             EEEEEECCCSSSCEEEEEEGGGSGGGTTTSSEEEEEEEESSCEEE-EEEETTCEEEEEECTTCEEEEEEEEH
T ss_pred             EEEEEEcCCCCCceEEEEEHHHcCCcccCCCCceEEEECCCCccc-ccccccceEEEEECCCeEEEEEEEcC
Confidence            999999999  89999999999999   55678999999999998 6654  78999999999999999985
>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A* Back     alignment and structure
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea} Back     alignment and structure
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A* Back     alignment and structure
>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A* Back     alignment and structure
>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125} Back     alignment and structure
>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A* Back     alignment and structure
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 Back     alignment and structure
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A* Back     alignment and structure
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A* Back     alignment and structure
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* Back     alignment and structure
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} Back     alignment and structure
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A* Back     alignment and structure
>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A* Back     alignment and structure
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A* Back     alignment and structure
>4ba0_A Alpha-glucosidase, putative, ADG31B; hydrolase; HET: 5GF PGE ARG; 1.85A {Cellvibrio japonicus} PDB: 4b9z_A* 4b9y_A* Back     alignment and structure
>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A* Back     alignment and structure
>2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A* Back     alignment and structure
>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A* Back     alignment and structure
>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A* Back     alignment and structure
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* Back     alignment and structure
>3top_A Maltase-glucoamylase, intestinal; membrane, hydrolase-hydrolase inhibitor complex; HET: ACR; 2.88A {Homo sapiens} PDB: 3ton_A* Back     alignment and structure
>2x2h_A Alpha-1,4-glucan lyase isozyme 1; anhydrofructose pathway, glycoside hydrolase family 3 starch binding domain; 2.06A {Gracilariopsis lemaneiformis} PDB: 2x2i_A* 2x2j_A* Back     alignment and structure
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* Back     alignment and structure
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A Back     alignment and structure
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A Back     alignment and structure
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A Back     alignment and structure
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A Back     alignment and structure
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Back     alignment and structure
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A Back     alignment and structure
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus} Back     alignment and structure
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} Back     alignment and structure
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} Back     alignment and structure
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ... Back     alignment and structure
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 Back     alignment and structure
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp} Back     alignment and structure
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A Back     alignment and structure
>3ues_A Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydrolase inhibitor complex; HET: DFU; 1.60A {Bifidobacterium longum subsp} PDB: 3mo4_A* 3uet_A* Back     alignment and structure
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A* Back     alignment and structure
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A Back     alignment and structure
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A Back     alignment and structure
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A* Back     alignment and structure
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm} Back     alignment and structure
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A* Back     alignment and structure
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A Back     alignment and structure
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} Back     alignment and structure
>2wvv_A Alpha-L-fucosidase; alpha-L-fucose, hydrolase, glycoside hydrolase family 29; 1.73A {Bacteroides thetaiotaomicron} PDB: 2xii_A* 2xib_A* 2wvv_B 2wvt_A* 2wvu_A* 2wvs_A* Back     alignment and structure
>4axn_A Chitinase C1; hydrolase; 1.68A {Serratia marcescens} Back     alignment and structure
>3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A* Back     alignment and structure
>3eyp_A Putative alpha-L-fucosidase; structural genomics, hydrolase, lipoprotein, PSI-2, protein initiative; 1.90A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} Back     alignment and structure
>1qw9_A Arabinosidase, alpha-L-arabinofuranosidase; hydrolase; HET: KHP; 1.20A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 1pz2_A* 1qw8_A* 1pz3_A Back     alignment and structure
>2vrq_A Alpha-L-arabinofuranosidase; hydrolase, glycosidase; HET: XYP; 2.00A {Thermobacillus xylanilyticus} PDB: 2vrk_A Back     alignment and structure
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ... Back     alignment and structure
>2c7f_A Alpha-L-arabinofuranosidase; glycosidase, xylan, arabinan, hydrolase; HET: AHR; 2.7A {Clostridium thermocellum} SCOP: b.71.1.2 c.1.8.3 PDB: 2c8n_A Back     alignment and structure
>2yih_A CEL44C, xyloglucanase; hydrolase, GH44, endo-glucanase, carbohydrate-binding protei; HET: BGC; 1.70A {Paenibacillus polymyxa} PDB: 2yjq_A* 2ykk_A* 3zq9_A* Back     alignment and structure
>3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A* Back     alignment and structure
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A* Back     alignment and structure
>2e4t_A Endoglucanase, xyloglucanase; TIM barrel, TIM-like barrel, composite domain of glycosyl HY families 5, 30, 39 and 51, hydrolase; 0.96A {Clostridium thermocellum} PDB: 2e0p_A 2eo7_A* 2ej1_A* 2eex_A* 2eqd_A* Back     alignment and structure
>3n12_A Chitinase A, chinctu2; zinc atoms, complex, hydrolase; 1.20A {Bacillus cereus} PDB: 3n11_A 3n15_A* 3n13_A* 3n17_A* 3n18_A* 3n1a_A* Back     alignment and structure
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A* Back     alignment and structure
>3gza_A Putative alpha-L-fucosidase; NP_812709.1, structural genomic center for structural genomics, JCSG; HET: MSE EPE; 1.60A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 397
d1uasa2273 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [ 6e-99
d1r46a2292 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) 1e-93
d1ktba2293 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallu 8e-92
d1szna2314 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [T 2e-82
d1zy9a2348 c.1.8.13 (A:178-525) Alpha-galactosidase GalA cata 2e-54
d1uasa189 b.71.1.1 (A:274-362) Melibiase {Rice (Oryza sativa 4e-27
d1ktba195 b.71.1.1 (A:294-388) Melibiase {Chicken (Gallus ga 3e-20
d1szna1103 b.71.1.1 (A:315-417) Melibiase {Trichoderma reesei 3e-17
d1r46a198 b.71.1.1 (A:324-421) Melibiase {Human (Homo sapien 8e-17
>d1uasa2 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} Length = 273 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Melibiase
species: Rice (Oryza sativa) [TaxId: 4530]

 Score =  293 bits (751), Expect = 6e-99
 Identities = 183/270 (67%), Positives = 211/270 (78%)

Query: 35  NGLAETPAMGWNSWNHFWGNINEDIIKAAADALVSSGLAKLGYIYVNIDDCWGEQDRDEK 94
           NGL  TP MGWNSWNHF+  INE II+  ADALV++GLAKLGY YVNIDDCW E  RD +
Sbjct: 3   NGLGRTPQMGWNSWNHFYCGINEQIIRETADALVNTGLAKLGYQYVNIDDCWAEYSRDSQ 62

Query: 95  GNLQARNTTFPSGIKALADYVHGKGLKLGIYSSAGYYTCSKQMPGSLGYEDQDAKTFASW 154
           GN      TFPSGIKALADYVH KGLKLGIYS AG  TCS +MPGSL +E+QD KTFASW
Sbjct: 63  GNFVPNRQTFPSGIKALADYVHAKGLKLGIYSDAGSQTCSNKMPGSLDHEEQDVKTFASW 122

Query: 155 GVDYLKYDNCYNDGSKPMDRYPVMTRALMNTGRPIYYSLCEWGDMHPALWGDKVGNSWRT 214
           GVDYLKYDNC + G   M+RY  M+ A+   G+ I++SLCEWG  +PA W  ++GNSWRT
Sbjct: 123 GVDYLKYDNCNDAGRSVMERYTRMSNAMKTYGKNIFFSLCEWGKENPATWAGRMGNSWRT 182

Query: 215 TGDIEDTWDSMISRADENEAFAKYARPGGWNDPDMLEVGNGGMTKDEYIVHFSIWAISKA 274
           TGDI D W SM SRADEN+ +A YA PGGWNDPDMLEVGNGGM++ EY  HFSIWA++KA
Sbjct: 183 TGDIADNWGSMTSRADENDQWAAYAGPGGWNDPDMLEVGNGGMSEAEYRSHFSIWALAKA 242

Query: 275 PLLLGCDVRNMTDDTLEIVGNKEVIAVNQD 304
           PLL+GCDVR+M+  T  I+ N EVIAVNQD
Sbjct: 243 PLLIGCDVRSMSQQTKNILSNSEVIAVNQD 272
>d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]} Length = 292 Back     information, alignment and structure
>d1ktba2 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} Length = 293 Back     information, alignment and structure
>d1szna2 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [TaxId: 51453]} Length = 314 Back     information, alignment and structure
>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} Length = 348 Back     information, alignment and structure
>d1uasa1 b.71.1.1 (A:274-362) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} Length = 89 Back     information, alignment and structure
>d1ktba1 b.71.1.1 (A:294-388) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} Length = 95 Back     information, alignment and structure
>d1szna1 b.71.1.1 (A:315-417) Melibiase {Trichoderma reesei [TaxId: 51453]} Length = 103 Back     information, alignment and structure
>d1r46a1 b.71.1.1 (A:324-421) Melibiase {Human (Homo sapiens) [TaxId: 9606]} Length = 98 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query397
d1uasa2273 Melibiase {Rice (Oryza sativa) [TaxId: 4530]} 100.0
d1r46a2292 Melibiase {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1ktba2293 Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} 100.0
d1szna2314 Melibiase {Trichoderma reesei [TaxId: 51453]} 100.0
d1zy9a2348 Alpha-galactosidase GalA catalytic domain {Thermot 100.0
d1uasa189 Melibiase {Rice (Oryza sativa) [TaxId: 4530]} 99.88
d1ktba195 Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} 99.83
d1r46a198 Melibiase {Human (Homo sapiens) [TaxId: 9606]} 99.79
d1szna1103 Melibiase {Trichoderma reesei [TaxId: 51453]} 99.75
d2f2ha4338 Putative glucosidase YicI, domain 2 {Escherichia c 99.45
d1ji1a283 Maltogenic amylase {Thermoactinomyces vulgaris, TV 98.34
d1wzla283 Maltogenic amylase {Thermoactinomyces vulgaris, TV 97.88
d1ea9c280 Maltogenic amylase {Bacillus sp., cyclomaltodextri 97.74
d1j0ha283 Neopullulanase {Bacillus stearothermophilus [TaxId 97.63
d2bhua3420 Glycosyltrehalose trehalohydrolase, central domain 94.7
d1j0ha3382 Neopullulanase, central domain {Bacillus stearothe 94.34
d1ht6a2347 Plant alpha-amylase {Barley (Hordeum vulgare), AMY 93.15
d1wzaa2409 Bacterial alpha-amylase {Halothermothrix orenii [T 92.82
d1eh9a3400 Glycosyltrehalose trehalohydrolase, central domain 92.39
d1qw9a1130 Alpha-l-arabinofuranosidase {Bacillus stearothermo 92.38
d1g5aa174 Amylosucrase {Neisseria polysaccharea [TaxId: 489] 92.06
d1m53a178 Isomaltulose synthase PalI {Klebsiella sp., lx3 [T 91.52
d1hl9a2350 Putative alpha-L-fucosidase, catalytic domain {The 91.49
d1h3ga283 Cyclomaltodextrinase {Flavobacterium sp. 92 [TaxId 91.29
d1gcya2357 G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase 91.14
d2c7fa1131 Alpha-l-arabinofuranosidase {Clostridium thermocel 91.0
d1g5aa2554 Amylosucrase {Neisseria polysaccharea [TaxId: 489] 90.54
d1qhoa4407 Cyclodextrin glycosyltransferase {Bacillus stearot 90.13
d1h3ga3422 Cyclomaltodextrinase, central domain {Flavobacteri 90.01
d1uoka179 Oligo-1,6-glucosidase {Bacillus cereus [TaxId: 139 89.46
d1ua7a178 Bacterial alpha-Amylase {Bacillus subtilis [TaxId: 89.3
d1ea9c3382 Maltogenic amylase, central domain {Bacillus sp., 89.22
d1wzla3382 Maltogenic amylase, central domain {Thermoactinomy 88.51
d1jaea2378 Animal alpha-amylase {Yellow mealworm (Tenebrio mo 88.35
d2d3na2394 Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 87.81
d1ua7a2344 Bacterial alpha-amylase {Bacillus subtilis [TaxId: 87.72
d1uoka2 479 Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 13 87.19
d1lwha2391 4-alpha-glucanotransferase {Thermotoga maritima [T 86.97
d1e43a2393 Bacterial alpha-amylase {Chimera (Bacillus amyloli 86.46
d2guya2381 Fungal alpha-amylases {Aspergillus oryzae, Taka-am 86.09
d1m53a2 478 Isomaltulose synthase PalI {Klebsiella sp., lx3 [T 86.01
d1m7xa3396 1,4-alpha-glucan branching enzyme, central domain 84.11
d2guya195 Fungal alpha-amylase {Aspergillus oryzae, Taka-amy 83.5
d3bmva4406 Cyclodextrin glycosyltransferase {Thermoanaerobact 83.33
d1nofa1106 Glycosyl hydrolase family 5 xylanase {Erwinia chry 82.27
d2aaaa195 Fungal alpha-amylase {Aspergillus niger, acid amyl 81.83
d3bmva389 Cyclodextrin glycosyltransferase {Thermoanaerobact 80.9
d1vema2417 Bacterial beta-amylase {Bacillus cereus [TaxId: 13 80.77
d2aaaa2381 Fungal alpha-amylases {Aspergillus niger, acid amy 80.4
>d1uasa2 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Melibiase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=100.00  E-value=1.2e-71  Score=532.28  Aligned_cols=273  Identities=67%  Similarity=1.213  Sum_probs=262.6

Q ss_pred             ccCCCCCCCceEEechhhhccCCCHHHHHHHHHHHHHcCCcccCceEEEeCCccccCCCCCCCCeeecCCCCCCcHHHHH
Q 039407           33 LANGLAETPAMGWNSWNHFWGNINEDIIKAAADALVSSGLAKLGYIYVNIDDCWGEQDRDEKGNLQARNTTFPSGIKALA  112 (397)
Q Consensus        33 ~~~g~~~~pp~GwnSW~~~~~~i~e~~i~~~ad~l~~~gl~~~Gy~~i~iDdgW~~~~rd~~G~~~~~~~~FP~Gl~~l~  112 (397)
                      ++||+++|||||||||++|+++|||+.|++++++|+++||+++||+||+||||||...+|..|+|++|++|||+|||+++
T Consensus         1 ~~ngla~tPp~GwnsW~~~~~~i~e~~~~~~~~~~~~~gl~~~G~~~~~iDdGW~~~~~d~~g~~~~~~~~fP~Gl~~~~   80 (273)
T d1uasa2           1 FENGLGRTPQMGWNSWNHFYCGINEQIIRETADALVNTGLAKLGYQYVNIDDCWAEYSRDSQGNFVPNRQTFPSGIKALA   80 (273)
T ss_dssp             CCSSCCSSCCEEEESHHHHTTCCCHHHHHHHHHHHHHTSHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTCTTCHHHHH
T ss_pred             CCCccCCCCCCccCcHHhhCcCCCHHHHHHHHHHHHHcCchhhCCeEEEEcCCcCCCCCCCCCCcccCccccCCChHHHH
Confidence            47999999999999999999999999999999999999999999999999999999888999999999999999999999


Q ss_pred             HHHHhCCCeEEEEeeCCccccCCCCCCccchHHHHHHHHHhcCCcEEEeeCCCCCCCCccchHHHHHHHHHhcCCCeEEE
Q 039407          113 DYVHGKGLKLGIYSSAGYYTCSKQMPGSLGYEDQDAKTFASWGVDYLKYDNCYNDGSKPMDRYPVMTRALMNTGRPIYYS  192 (397)
Q Consensus       113 ~~i~~~Glk~Giw~~pg~~~c~~~~pg~~~~~~~~~~~~~~wGvdylK~D~~~~~~~~~~~~y~~m~~al~~~g~~i~~~  192 (397)
                      +++|++|||||||++|+...|..++|+++.|++.++++|++|||||||+|||........++|..+.++|++++++++++
T Consensus        81 ~~~~~~G~~~Glw~~~~~~~~~~~~~~~~~~~~~d~~~~~~wGvd~vK~D~~~~~~~~~~~~~~~~~~~l~~~~r~~~~~  160 (273)
T d1uasa2          81 DYVHAKGLKLGIYSDAGSQTCSNKMPGSLDHEEQDVKTFASWGVDYLKYDNCNDAGRSVMERYTRMSNAMKTYGKNIFFS  160 (273)
T ss_dssp             HHHHHTTCEEEEEEESSSBCTTSSSBCCTTCHHHHHHHHHHHTCCEEEEECCCCTTCCHHHHHHHHHHHHHHHCTTSEEE
T ss_pred             HHHHhCCCeEEEecCCcccccCCCCCcchhhHHHHHHHHHhCCCceeccccccccchHHHHHHHHHHHHHHHhCCCcEEe
Confidence            99999999999999999999999999999999999999999999999999999877778889999999999999999999


Q ss_pred             ecCCCCCCcccccccccCeEeecCCCCCchHHHHHHHHhhccchhhcCCCCCCCCCCcccCCCCCCHHHHHHHHHHHHHh
Q 039407          193 LCEWGDMHPALWGDKVGNSWRTTGDIEDTWDSMISRADENEAFAKYARPGGWNDPDMLEVGNGGMTKDEYIVHFSIWAIS  272 (397)
Q Consensus       193 ~c~~g~~~~~~~~~~~~~~~Ris~D~~~~w~~~~~~~~~~~~~~~~~~~~~~nDpD~l~vg~~~lt~~e~rt~~~lwa~~  272 (397)
                      +|.++...+..+..+++|+||+++|+.+.|+++..++..+..++.+.++++|+||||+++++.++|.+|.|+||++|||+
T Consensus       161 ~~~~g~~~~~~~~~~~~~~~R~s~D~~~~w~~~~~~~~~~~~~~~~~g~~~~~D~D~~~~~~~~~t~~E~rt~~al~~i~  240 (273)
T d1uasa2         161 LCEWGKENPATWAGRMGNSWRTTGDIADNWGSMTSRADENDQWAAYAGPGGWNDPDMLEVGNGGMSEAEYRSHFSIWALA  240 (273)
T ss_dssp             EESTTTTCGGGTGGGTCSEEECSSCCCSSHHHHHHHHHHHHTTGGGCBTTBEEECCCCCTTSSSSCHHHHHHHHHHHHHT
T ss_pred             ecccCCCcchhhhhhhhhhhcccCCcCcchhhHHHHHHHHHHHHHHhCCCcccCccccccCCCCCCHHHHHHHHHHHHHH
Confidence            99988877777788999999999999999999998888888888889999999999999999999999999999999999


Q ss_pred             cCCeeeccCCCCCChhHHhhhcChhhhhhccCC
Q 039407          273 KAPLLLGCDVRNMTDDTLEIVGNKEVIAVNQDP  305 (397)
Q Consensus       273 gspL~is~dl~~l~~~~~~ll~N~~liainqd~  305 (397)
                      +|||++|+||++++++.+++|+|+|+||||||.
T Consensus       241 ~~pL~i~~Dl~~l~~~~l~ll~N~e~IAinqd~  273 (273)
T d1uasa2         241 KAPLLIGCDVRSMSQQTKNILSNSEVIAVNQDS  273 (273)
T ss_dssp             TCCEEECSCTTSCCHHHHHHHTCHHHHHHHTCT
T ss_pred             hchhhhcCCcccCCHHHHHHhcCHHHHhhccCC
Confidence            999999999999999999999999999999983
>d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ktba2 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1szna2 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1uasa1 b.71.1.1 (A:274-362) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} Back     information, alignment and structure
>d1ktba1 b.71.1.1 (A:294-388) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1r46a1 b.71.1.1 (A:324-421) Melibiase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1szna1 b.71.1.1 (A:315-417) Melibiase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d2f2ha4 c.1.8.13 (A:248-585) Putative glucosidase YicI, domain 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ji1a2 b.71.1.1 (A:555-637) Maltogenic amylase {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} Back     information, alignment and structure
>d1wzla2 b.71.1.1 (A:503-585) Maltogenic amylase {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Back     information, alignment and structure
>d1ea9c2 b.71.1.1 (C:504-583) Maltogenic amylase {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Back     information, alignment and structure
>d1j0ha2 b.71.1.1 (A:506-588) Neopullulanase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} Back     information, alignment and structure
>d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} Back     information, alignment and structure
>d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Back     information, alignment and structure
>d1qw9a1 b.71.1.2 (A:5-17,A:385-501) Alpha-l-arabinofuranosidase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1g5aa1 b.71.1.1 (A:555-628) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} Back     information, alignment and structure
>d1m53a1 b.71.1.1 (A:521-598) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} Back     information, alignment and structure
>d1hl9a2 c.1.8.11 (A:7-356) Putative alpha-L-fucosidase, catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1h3ga2 b.71.1.1 (A:518-600) Cyclomaltodextrinase {Flavobacterium sp. 92 [TaxId: 197856]} Back     information, alignment and structure
>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} Back     information, alignment and structure
>d2c7fa1 b.71.1.2 (A:2-16,A:387-502) Alpha-l-arabinofuranosidase {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} Back     information, alignment and structure
>d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} Back     information, alignment and structure
>d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} Back     information, alignment and structure
>d1uoka1 b.71.1.1 (A:480-558) Oligo-1,6-glucosidase {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1ua7a1 b.71.1.1 (A:348-425) Bacterial alpha-Amylase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Back     information, alignment and structure
>d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Back     information, alignment and structure
>d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} Back     information, alignment and structure
>d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} Back     information, alignment and structure
>d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} Back     information, alignment and structure
>d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} Back     information, alignment and structure
>d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} Back     information, alignment and structure
>d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2guya1 b.71.1.1 (A:382-476) Fungal alpha-amylase {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} Back     information, alignment and structure
>d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} Back     information, alignment and structure
>d1nofa1 b.71.1.2 (A:31-43,A:321-413) Glycosyl hydrolase family 5 xylanase {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d2aaaa1 b.71.1.1 (A:382-476) Fungal alpha-amylase {Aspergillus niger, acid amylase [TaxId: 5061]} Back     information, alignment and structure
>d3bmva3 b.71.1.1 (A:407-495) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} Back     information, alignment and structure
>d1vema2 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} Back     information, alignment and structure