Citrus Sinensis ID: 039449
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 253 | 2.2.26 [Sep-21-2011] | |||||||
| Q5E9D6 | 251 | Haloacid dehalogenase-lik | yes | no | 0.833 | 0.840 | 0.336 | 1e-27 | |
| Q9CYW4 | 251 | Haloacid dehalogenase-lik | yes | no | 0.833 | 0.840 | 0.331 | 1e-26 | |
| Q7T012 | 242 | Haloacid dehalogenase-lik | yes | no | 0.818 | 0.855 | 0.333 | 3e-26 | |
| Q5HZL9 | 244 | Haloacid dehalogenase-lik | N/A | no | 0.905 | 0.938 | 0.304 | 2e-23 | |
| Q9BSH5 | 251 | Haloacid dehalogenase-lik | yes | no | 0.833 | 0.840 | 0.308 | 1e-21 | |
| Q94915 | 260 | Rhythmically expressed ge | no | no | 0.833 | 0.811 | 0.312 | 7e-21 | |
| O14262 | 228 | Putative uncharacterized | yes | no | 0.806 | 0.894 | 0.257 | 1e-11 | |
| Q08CY5 | 189 | Haloacid dehalogenase-lik | yes | no | 0.541 | 0.724 | 0.294 | 1e-11 | |
| Q04223 | 302 | Uncharacterized protein Y | yes | no | 0.794 | 0.665 | 0.279 | 4e-11 | |
| O26311 | 226 | Uncharacterized HAD-hydro | yes | no | 0.505 | 0.566 | 0.343 | 3e-08 |
| >sp|Q5E9D6|HDHD3_BOVIN Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Bos taurus GN=HDHD3 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 117/217 (53%), Gaps = 6/217 (2%)
Query: 1 MALLSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKN 60
MA +LR +T DV TLL + +G Y A++ GL + + + FK AYK +++
Sbjct: 1 MAHRLQLRLLTWDVKDTLLRLRHPVGVEYATKARAHGLEV-EATALGQAFKQAYKAQSQS 59
Query: 61 YPCFGFAAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQ 120
+P +G + + WW V+ +F +AG D I ++Y F S + + V ++
Sbjct: 60 FPNYGLGHGLTSHQWWLDLVQQTFHQAGV-RDAQAVAPIAEQLYKDFSSPSTWQVLEGAE 118
Query: 121 PFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEI 180
LR R++GL + ++SN + R +D++ GV +DF + S G KPDPRI+
Sbjct: 119 ATLRGCRKRGLKLAVVSNFDRRLEDILE---GVGLREHFDFVLTSEAAGWPKPDPRIFHE 175
Query: 181 ALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLV 217
AL A + P HIGDS+++DY A++VGMH+ LV
Sbjct: 176 ALHLA-QVEPAVGAHIGDSYQRDYKGARAVGMHSFLV 211
|
Bos taurus (taxid: 9913) |
| >sp|Q9CYW4|HDHD3_MOUSE Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Mus musculus GN=Hdhd3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 119/217 (54%), Gaps = 6/217 (2%)
Query: 1 MALLSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKN 60
MA ++R +T DV TL+ + +G+ Y A++ G+ D V + F+ AY+ + N
Sbjct: 1 MAHRLQMRLLTWDVKDTLIKLRRPVGEEYASKARAHGVVVEDIT-VEQAFRQAYRAQSHN 59
Query: 61 YPCFGFAAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQ 120
+P +G + + + WWK V +F AG D + ++Y F S + V ++
Sbjct: 60 FPNYGLSRGLTSRQWWKDVVLHTFRLAGVP-DAQAMTPVADQLYEDFSSPFTWQVLEGAE 118
Query: 121 PFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEI 180
L+ R++GL + ++SN + R +D IL LG+ + +DF + S G KPDPRI+
Sbjct: 119 MTLKGCRKRGLKLAVVSNFDRRLED-ILTGLGLRE--HFDFVLTSEAVGCPKPDPRIFRE 175
Query: 181 ALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLV 217
AL+RA + P A H+GDS+ DY +++VGMH+ LV
Sbjct: 176 ALQRA-CVEPAVAAHVGDSYLCDYQGSQAVGMHSFLV 211
|
Mus musculus (taxid: 10090) |
| >sp|Q7T012|HDHD3_DANRE Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Danio rerio GN=hdhd3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 119 bits (297), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 112/213 (52%), Gaps = 6/213 (2%)
Query: 7 LRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGF 66
+R + DV TLL + +G+ YC A+ GL +V F+LAYK+ ++ P +G
Sbjct: 5 VRWVLWDVKDTLLKVRRSVGEQYCREAQQAGLQLSP-AQVETAFRLAYKQKSQLLPNYGR 63
Query: 67 AAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWA 126
A M + VWW VRD+F + G +D +K+ +Y +F + VF DS L+
Sbjct: 64 AQGMDSQVWWTGLVRDTFGQCGV-HDPALLDKLANNLYHNFCGPENWEVFSDSNSTLKSC 122
Query: 127 REKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAG 186
GL G++SN + R + ++ G T + F V S V KPDP I+ ALER G
Sbjct: 123 TALGLKQGVVSNFDRRLEGIL---RGCGLLTHFSFIVTSEDARVAKPDPAIFSQALERCG 179
Query: 187 NIAPEEALHIGDSFRKDYVPAKSVGMHALLVDR 219
+ +H+GD + KDY+ ++S+G+ L++R
Sbjct: 180 -VPASSVVHVGDHYVKDYLTSRSLGIRGYLLNR 211
|
Danio rerio (taxid: 7955) |
| >sp|Q5HZL9|HDHD3_XENLA Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Xenopus laevis GN=hdhd3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 121/243 (49%), Gaps = 14/243 (5%)
Query: 7 LRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGF 66
LR IT DV TLL + +G Y AK GL C + + F+ AY+ ++ +P +G
Sbjct: 3 LRLITWDVKDTLLRVRVPVGQQYYAEAKKRGL-CVNPGTLETSFRNAYRSHSRLFPNYGL 61
Query: 67 AAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWA 126
A M + WW V +F +G + D DT + + +++Y F ++ + + P ++ L
Sbjct: 62 AQGMSSRQWWLDVVLQTFRLSGIE-DSDTVQSLAKQLYQDFSTAHNWALVPGAREALDSC 120
Query: 127 REKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAG 186
GL + +ISN + R ++++ +DF V + GV KP I+ AL A
Sbjct: 121 TNLGLRMAVISNFDRRLEELLRQCC---LERYFDFVVTAESAGVAKPHLGIFHKALSLA- 176
Query: 187 NIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWR-------KSGAIVLPDL 239
+ P +A+H+GD + DY A+ VGMH+ L+ KTP +W +S ++P L
Sbjct: 177 KVPPHQAVHVGDDYVNDYCAARMVGMHSYLIHP-KTPPKLQWNIPEEHVIQSPEQLIPKL 235
Query: 240 VAV 242
V V
Sbjct: 236 VGV 238
|
Xenopus laevis (taxid: 8355) |
| >sp|Q9BSH5|HDHD3_HUMAN Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Homo sapiens GN=HDHD3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 111/217 (51%), Gaps = 6/217 (2%)
Query: 1 MALLSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKN 60
MA ++R +T DV TLL + LG+ Y A++ GL + + +GF+ AY+ + +
Sbjct: 1 MAHRLQIRLLTWDVKDTLLRLRHPLGEAYATKARAHGLEV-EPSALEQGFRQAYRAQSHS 59
Query: 61 YPCFGFAAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQ 120
+P +G + + + WW V +F AG D I ++Y F + V ++
Sbjct: 60 FPNYGLSHGLTSRQWWLDVVLQTFHLAGVQ-DAQAVAPIAEQLYKDFSHPCTWQVLDGAE 118
Query: 121 PFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEI 180
LR R +GL + +ISN + + + G+ +DF + S G KPDPRI++
Sbjct: 119 DTLRECRTRGLRLAVISNFD---RRLEGILGGLGLREHFDFVLTSEAAGWPKPDPRIFQE 175
Query: 181 ALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLV 217
AL R ++ P A H+GD++ DY ++VGMH+ LV
Sbjct: 176 AL-RLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLV 211
|
Homo sapiens (taxid: 9606) |
| >sp|Q94915|REG2_DROME Rhythmically expressed gene 2 protein OS=Drosophila melanogaster GN=Reg-2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 100 bits (250), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 109/227 (48%), Gaps = 16/227 (7%)
Query: 1 MALLSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKN 60
M LSR R IT DVT TLL ++ G Y G C D + + FK + +M ++
Sbjct: 1 MRSLSRFRLITFDVTNTLLQFRTTPGKQYGEIGALFGARC-DNNELAKNFKANWYKMNRD 59
Query: 61 YPCFG--FAAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPD 118
YP FG +M WW+ + +F +G ++ + + +S +
Sbjct: 60 YPNFGRDTNPQMEWQQWWRKLIAGTFAESGAAIPDEKLHNFSNHLIELYKTSICWQPCNG 119
Query: 119 SQPFLRWAREK----GLIVGIISNAEYRYQDVILPALGVNQGTEW--DFGVFSGLEGVEK 172
S L+ R++ +G+I+N + R LP L N + DF + S EK
Sbjct: 120 SVELLQQLRKELKPEKCKLGVIANFDPR-----LPTLLQNTKLDQYLDFAINSYEVQAEK 174
Query: 173 PDPRIYEIALERAG--NIAPEEALHIGDSFRKDYVPAKSVGMHALLV 217
PDP+I++ A+E++G N+ PEE LHIGD DY+ AK +G H+ LV
Sbjct: 175 PDPQIFQKAMEKSGLKNLKPEECLHIGDGPTTDYLAAKELGWHSALV 221
|
Drosophila melanogaster (taxid: 7227) |
| >sp|O14262|YFP5_SCHPO Putative uncharacterized hydrolase C7D4.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC7D4.05 PE=3 SV=3 | Back alignment and function description |
|---|
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 17/221 (7%)
Query: 4 LSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPC 63
+ +++ +T D GT+L + Y A+ G+ + H K A+K+ ++ +
Sbjct: 7 IQKIKLVTFDAFGTILHLSKPVPIVYSEVAQKYGVHATIDEIEHNSNK-AFKDFSEKHKN 65
Query: 64 FGFAAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFL 123
G + + WW + SF ++ +++ F YT+ P FL
Sbjct: 66 HGKKSGLNPHDWWIKVIEHSFPTP-------VPAEMAEELWSYFSKKTGYTIHPLLIDFL 118
Query: 124 -RWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIAL 182
R E+ I+GIISN + R + +L G++ D FS G EKP I++ A+
Sbjct: 119 KRNKEERKYIIGIISNTDERIR-TVLEDYGIDHLI--DIYAFSYDVGFEKPSREIFDYAM 175
Query: 183 ERA-----GNIAPEEALHIGDSFRKDYVPAKSVGMHALLVD 218
E+A I PEE +H+GD KD A+++ +A D
Sbjct: 176 EKAVKLLGQEIQPEECMHLGDDLIKDVSAARNIQWNAEYCD 216
|
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 3 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q08CY5|HDHD3_XENTR Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Xenopus tropicalis GN=hdhd3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
Query: 7 LRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGF 66
LR IT D+ TLL + +G Y AK GL C D + F+ AY+ ++ +P +G
Sbjct: 3 LRLITWDIKDTLLRVRVPVGQQYFAEAKRQGL-CMDPGSLETSFRNAYRTHSRLFPNYGL 61
Query: 67 AAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWA 126
A M + WW V +F +G + D++T + +++Y F ++ + V P ++ L
Sbjct: 62 AQGMDSRQWWLDVVLQTFRLSGAE-DDETVRSVAQQLYQDFSTARNWAVVPGAREALDSC 120
Query: 127 REKGLIVGIISNAEYRYQD 145
+ GL + +ISN + R ++
Sbjct: 121 KGLGLKMAVISNFDRRLEE 139
|
Xenopus tropicalis (taxid: 8364) |
| >sp|Q04223|YM14_YEAST Uncharacterized protein YMR130W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YMR130W PE=1 SV=1 | Back alignment and function description |
|---|
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 106/236 (44%), Gaps = 35/236 (14%)
Query: 4 LSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPC 63
++R IT D TL A K + + YC+ + G+ + + F +K++ ++YP
Sbjct: 18 VARPLIITFDAYNTLYATKLPVMEQYCIVGRKYGIKA-NPSTLTNNFPHVFKKLKEDYPQ 76
Query: 64 FGFAAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFL 123
+G + + WW +R+ F A + ++ +I R + F S Y V+PD FL
Sbjct: 77 YGKYSGIKPEQWWSILIRNVF--APNEIPDEMINEILMR-FEGFDS---YFVYPDLIKFL 130
Query: 124 R--WAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGL------EGVEKPDP 175
+ +R +I+GI+SN D I L N G F FSG + KPD
Sbjct: 131 KDLKSRHPDVILGIVSNT-----DPIFYKLLKNIGL---FETFSGHIYLSYELNLAKPDR 182
Query: 176 RIYEIALERAGNIAP--------EEAL----HIGDSFRKDYVPAKSVGMHALLVDR 219
I++ AL+ + P EE L HIGD + D A++ G +L+DR
Sbjct: 183 AIFQYALDDIISKQPHLLEKYTREEILQHCFHIGDELKNDLEGAEAAGWTGILLDR 238
|
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) |
| >sp|O26311|Y209_METTH Uncharacterized HAD-hydrolase MTH_209 OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=MTH_209 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 71/134 (52%), Gaps = 6/134 (4%)
Query: 116 FPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDP 175
FP++ L + KG +G+ISN Q L LG++ +D V S G EKP+
Sbjct: 96 FPNTTSTLIDLKSKGYRLGVISNGITIKQWEKLIRLGIHHF--FDEVVTSDEVGFEKPNI 153
Query: 176 RIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEW-RKSG-- 232
RI+E AL R G PE ++ +G+ F +D + A + GM A+LV+ T ++ K+G
Sbjct: 154 RIFEEALRRMG-CKPERSVMVGNKFNEDILGATNAGMSAILVNSELTEAERDHVEKNGLD 212
Query: 233 AIVLPDLVAVKEFL 246
V+ D+ +KE L
Sbjct: 213 VTVIDDISQLKEIL 226
|
Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) (taxid: 187420) EC: 3 EC: . EC: - EC: . EC: - EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 253 | ||||||
| 449433485 | 249 | PREDICTED: haloacid dehalogenase-like hy | 0.984 | 1.0 | 0.871 | 1e-131 | |
| 225423595 | 250 | PREDICTED: haloacid dehalogenase-like hy | 0.984 | 0.996 | 0.871 | 1e-129 | |
| 255637161 | 253 | unknown [Glycine max] | 1.0 | 1.0 | 0.853 | 1e-129 | |
| 255574470 | 279 | rhythmically-expressed protein 2 protein | 1.0 | 0.906 | 0.845 | 1e-129 | |
| 363806868 | 253 | uncharacterized protein LOC100815659 [Gl | 1.0 | 1.0 | 0.849 | 1e-127 | |
| 357449159 | 253 | Haloacid dehalogenase-like hydrolase dom | 0.996 | 0.996 | 0.837 | 1e-126 | |
| 388522869 | 253 | unknown [Lotus japonicus] | 0.996 | 0.996 | 0.829 | 1e-125 | |
| 224072391 | 257 | predicted protein [Populus trichocarpa] | 0.980 | 0.964 | 0.848 | 1e-125 | |
| 242096638 | 274 | hypothetical protein SORBIDRAFT_10g02657 | 0.976 | 0.901 | 0.809 | 1e-123 | |
| 356558231 | 1135 | PREDICTED: pentatricopeptide repeat-cont | 0.948 | 0.211 | 0.858 | 1e-123 |
| >gi|449433485|ref|XP_004134528.1| PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein 3-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 472 bits (1215), Expect = e-131, Method: Compositional matrix adjust.
Identities = 217/249 (87%), Positives = 239/249 (95%)
Query: 1 MALLSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKN 60
M+LLS+LRCIT+DVTGTLLAYKGELGDYYCMAAKSVGLPCPDY+RVHEGFK AYKEMAKN
Sbjct: 1 MSLLSKLRCITIDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYRRVHEGFKFAYKEMAKN 60
Query: 61 YPCFGFAAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQ 120
YPCFG+AAKMPNI+WWKTCVRDSF+RAGYDYDE+TFEK+FRRIYASFGSSAPY VF DSQ
Sbjct: 61 YPCFGYAAKMPNIIWWKTCVRDSFIRAGYDYDEETFEKVFRRIYASFGSSAPYKVFEDSQ 120
Query: 121 PFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEI 180
PFLRW RE+GL+VGI+SNAEYRYQDVILPALG+NQG+EWDFGVFSGLEGVEKPDPRIYEI
Sbjct: 121 PFLRWVREQGLMVGIVSNAEYRYQDVILPALGLNQGSEWDFGVFSGLEGVEKPDPRIYEI 180
Query: 181 ALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLV 240
A+ERAGNIAPEEALHIGDS RKDY+PAKSVGMH LL+DRFKT DA+EWRKSGA+VLPDLV
Sbjct: 181 AIERAGNIAPEEALHIGDSLRKDYIPAKSVGMHGLLLDRFKTSDAEEWRKSGAVVLPDLV 240
Query: 241 AVKEFLTSE 249
A +E+L +
Sbjct: 241 AAREWLQNN 249
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225423595|ref|XP_002273965.1| PREDICTED: haloacid dehalogenase-like hydrolase domain-containing-like isoform 2 [Vitis vinifera] gi|225423597|ref|XP_002273939.1| PREDICTED: haloacid dehalogenase-like hydrolase domain-containing-like isoform 1 [Vitis vinifera] gi|297738028|emb|CBI27229.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 217/249 (87%), Positives = 237/249 (95%)
Query: 1 MALLSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKN 60
M++LS+LRCIT DVTGTL+AYKGELGDYYCMAAKS+GLPCPDYKRVHEGFKLAY EMAK
Sbjct: 1 MSMLSKLRCITFDVTGTLIAYKGELGDYYCMAAKSIGLPCPDYKRVHEGFKLAYTEMAKK 60
Query: 61 YPCFGFAAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQ 120
YPCFG+AAKMPNIVWWKTCVRDSFVRAGYDYDE+TFEK+FRRIY++FGSSAPYT+FPDSQ
Sbjct: 61 YPCFGYAAKMPNIVWWKTCVRDSFVRAGYDYDEETFEKVFRRIYSTFGSSAPYTIFPDSQ 120
Query: 121 PFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEI 180
PFLRW EKGL VGIISNAEYRY+DVILPALG+NQGTEWDFGVFSGLEGVEKP+PRIYEI
Sbjct: 121 PFLRWVHEKGLKVGIISNAEYRYKDVILPALGLNQGTEWDFGVFSGLEGVEKPNPRIYEI 180
Query: 181 ALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLV 240
ALERAGNIAPEE LHIGDS RKDY+PAK VGMHALL+DRFKTPDA EW KSGA VLPDLV
Sbjct: 181 ALERAGNIAPEEVLHIGDSMRKDYLPAKGVGMHALLLDRFKTPDAIEWSKSGATVLPDLV 240
Query: 241 AVKEFLTSE 249
+V+E+LTS+
Sbjct: 241 SVQEWLTSQ 249
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255637161|gb|ACU18911.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 216/253 (85%), Positives = 241/253 (95%)
Query: 1 MALLSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKN 60
M+LL++LRC+T+DVTGTL+AYKGELGDYYCMAAK+ G PCPDY+R+HEGFKLAYKEMAKN
Sbjct: 1 MSLLAKLRCVTIDVTGTLMAYKGELGDYYCMAAKAAGKPCPDYQRMHEGFKLAYKEMAKN 60
Query: 61 YPCFGFAAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQ 120
YPCFG AAKMPNIVWWKTCVRDSFVRAGY+YDE+TFEKIFRRIYASFGSSAPYTVFPDSQ
Sbjct: 61 YPCFGHAAKMPNIVWWKTCVRDSFVRAGYEYDEETFEKIFRRIYASFGSSAPYTVFPDSQ 120
Query: 121 PFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEI 180
PFLRW R +GL VGI+SNAEYRYQDVILPALG+N+G+EWDFGVFSGLEGVEKP+P+IYEI
Sbjct: 121 PFLRWLRGEGLKVGIVSNAEYRYQDVILPALGLNEGSEWDFGVFSGLEGVEKPNPKIYEI 180
Query: 181 ALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLV 240
ALERAGNIAPEEALHIGDS RKDY PAKS+GMHALL+DRFKTPDA EWRKSGA+VLPDL+
Sbjct: 181 ALERAGNIAPEEALHIGDSMRKDYEPAKSIGMHALLLDRFKTPDAVEWRKSGAVVLPDLL 240
Query: 241 AVKEFLTSEISAC 253
A KE+L+S+ S C
Sbjct: 241 AAKEWLSSDKSNC 253
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255574470|ref|XP_002528147.1| rhythmically-expressed protein 2 protein, putative [Ricinus communis] gi|223532445|gb|EEF34238.1| rhythmically-expressed protein 2 protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 214/253 (84%), Positives = 239/253 (94%)
Query: 1 MALLSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKN 60
M+LLS+LRCITVDVTGTL+AYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAY EMAK
Sbjct: 27 MSLLSKLRCITVDVTGTLIAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYTEMAKK 86
Query: 61 YPCFGFAAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQ 120
YPCFG AAKMPNIVWWK VR+SF++AGYDYDE+TFEKIFRR+YASFGSSAPY++FPDSQ
Sbjct: 87 YPCFGHAAKMPNIVWWKIVVRNSFMKAGYDYDEETFEKIFRRVYASFGSSAPYSIFPDSQ 146
Query: 121 PFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEI 180
PFLRWAREKGL+VGI+SNAEYRY DVILPALG+NQG+EWDFGVFSGL+GVEKPDPR+Y+I
Sbjct: 147 PFLRWAREKGLLVGIVSNAEYRYHDVILPALGLNQGSEWDFGVFSGLDGVEKPDPRMYKI 206
Query: 181 ALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLV 240
ALE+AGN+APEEALHIGDS RKDY+PAKSVGMHALL+DRFKTPDA+EWRKSGA VLPDLV
Sbjct: 207 ALEKAGNVAPEEALHIGDSMRKDYLPAKSVGMHALLLDRFKTPDAEEWRKSGATVLPDLV 266
Query: 241 AVKEFLTSEISAC 253
+V+E L+ C
Sbjct: 267 SVQELLSLGTLTC 279
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|363806868|ref|NP_001242040.1| uncharacterized protein LOC100815659 [Glycine max] gi|255638788|gb|ACU19698.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 215/253 (84%), Positives = 239/253 (94%)
Query: 1 MALLSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKN 60
M+LL++LRC+T+DVTGTL+AYKGELGDYYCMAAK+ G PCPDYKR+HEGFKLAYKEMAKN
Sbjct: 1 MSLLAKLRCVTIDVTGTLMAYKGELGDYYCMAAKAAGKPCPDYKRMHEGFKLAYKEMAKN 60
Query: 61 YPCFGFAAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQ 120
YPCFG AAKMPNIVWWKTCVRDSFVRAGY+YDE+TFEKIFRRIYASFGSSAPYTVFPDSQ
Sbjct: 61 YPCFGHAAKMPNIVWWKTCVRDSFVRAGYEYDEETFEKIFRRIYASFGSSAPYTVFPDSQ 120
Query: 121 PFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEI 180
PFLRW R +GL VGI+SNAEYRYQDVILPALG+N+G+E DFGVFSGLEGVEKP+ +IYEI
Sbjct: 121 PFLRWLRGEGLKVGIVSNAEYRYQDVILPALGLNEGSERDFGVFSGLEGVEKPNLKIYEI 180
Query: 181 ALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLV 240
ALERAGNIAPEEALHIGDS RKDY PAKS+GMHALL+DRFKTPDA EWRKSGA+VLPDL+
Sbjct: 181 ALERAGNIAPEEALHIGDSMRKDYEPAKSIGMHALLLDRFKTPDAVEWRKSGAVVLPDLL 240
Query: 241 AVKEFLTSEISAC 253
A KE+L+S+ S C
Sbjct: 241 AAKEWLSSDKSNC 253
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357449159|ref|XP_003594856.1| Haloacid dehalogenase-like hydrolase domain-containing protein [Medicago truncatula] gi|355483904|gb|AES65107.1| Haloacid dehalogenase-like hydrolase domain-containing protein [Medicago truncatula] gi|388496550|gb|AFK36341.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 211/252 (83%), Positives = 236/252 (93%)
Query: 1 MALLSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKN 60
M++L +LRC+T+DVTGTL+AYKGELGDYYCMAAK+ G PCPDYKR+HEGFK AYK+MAK
Sbjct: 1 MSILPKLRCVTIDVTGTLMAYKGELGDYYCMAAKASGRPCPDYKRMHEGFKYAYKDMAKK 60
Query: 61 YPCFGFAAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQ 120
YPCFGFAAKMPNIVWWKTCVRDSFVRAGY+YDE+TFEKIFRRIY+SFGSSAPYTVFPDS+
Sbjct: 61 YPCFGFAAKMPNIVWWKTCVRDSFVRAGYEYDEETFEKIFRRIYSSFGSSAPYTVFPDSK 120
Query: 121 PFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEI 180
PFLRW R KGL VGI+SNAEYRY+DVILPALG+NQG+EWDFGVFSGLEGVEKPDP+IYEI
Sbjct: 121 PFLRWLRGKGLKVGIVSNAEYRYRDVILPALGLNQGSEWDFGVFSGLEGVEKPDPKIYEI 180
Query: 181 ALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLV 240
ALERAGNIAPEEALHIGDS RKDY PAKS+GMHALL+DRFKTP+A EWRKSGA+VLPDL
Sbjct: 181 ALERAGNIAPEEALHIGDSMRKDYEPAKSIGMHALLLDRFKTPEAVEWRKSGAVVLPDLT 240
Query: 241 AVKEFLTSEISA 252
+E+L+SE S
Sbjct: 241 TTQEWLSSEKST 252
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388522869|gb|AFK49496.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 209/252 (82%), Positives = 236/252 (93%)
Query: 1 MALLSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKN 60
M++L+RLRC+TVDVTGTL+AYKGELGDYYCMAAK+ G PCPDYKRVHEGFKLAY++MAK
Sbjct: 1 MSILARLRCVTVDVTGTLMAYKGELGDYYCMAAKAAGHPCPDYKRVHEGFKLAYRDMAKK 60
Query: 61 YPCFGFAAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQ 120
YPCFGF AKMPNIVWWKTCVRDSFVRAGY+YDE+TFEKIFRRIYASFGSSAPYTVFPDS+
Sbjct: 61 YPCFGFGAKMPNIVWWKTCVRDSFVRAGYEYDEETFEKIFRRIYASFGSSAPYTVFPDSR 120
Query: 121 PFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEI 180
PFLRW R KG+ VG++SNAEYRY DVILPA+G+N+G+EWDFGVFSGLEGVEKP+P+IYEI
Sbjct: 121 PFLRWLRGKGVKVGLVSNAEYRYPDVILPAMGINEGSEWDFGVFSGLEGVEKPNPKIYEI 180
Query: 181 ALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLV 240
ALERAGNI PEE LHIGDS RKDY PAKS+GMHALL+DRFKTPDA EWRKSGA+VLPDL
Sbjct: 181 ALERAGNIKPEETLHIGDSMRKDYEPAKSIGMHALLLDRFKTPDADEWRKSGAVVLPDLE 240
Query: 241 AVKEFLTSEISA 252
A +E+L+SE S+
Sbjct: 241 ATQEWLSSEKSS 252
|
Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224072391|ref|XP_002303713.1| predicted protein [Populus trichocarpa] gi|222841145|gb|EEE78692.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust.
Identities = 213/251 (84%), Positives = 234/251 (93%), Gaps = 3/251 (1%)
Query: 1 MALLSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKN 60
M+LLS+LRCITVDVTGTL+AYKGELGDYYCMAAKSVGLPCPDYKR+HEGFKLAY EMAK
Sbjct: 1 MSLLSKLRCITVDVTGTLIAYKGELGDYYCMAAKSVGLPCPDYKRMHEGFKLAYTEMAKK 60
Query: 61 YPCFGFAAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQ 120
YPCFG AAK+P IVWWKTCVR+SF++AGYDYDE+TFEKIFRRIYASFGSSAPY+VFPDSQ
Sbjct: 61 YPCFGHAAKLPTIVWWKTCVRNSFIKAGYDYDEETFEKIFRRIYASFGSSAPYSVFPDSQ 120
Query: 121 PFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEI 180
PFLRWAR +GL+VG++SNAEYRYQDVILPALG+ QG+EWDFGVFSGLEGVEKPDPRIY+I
Sbjct: 121 PFLRWARGEGLLVGLVSNAEYRYQDVILPALGLEQGSEWDFGVFSGLEGVEKPDPRIYKI 180
Query: 181 ALERAGN---IAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLP 237
ALERAG IAPE LHIGDS RKDY+PAKSVGM ALL+DRFKTPDA EW+KSGA VLP
Sbjct: 181 ALERAGKIAPIAPEVTLHIGDSMRKDYLPAKSVGMQALLLDRFKTPDAVEWKKSGATVLP 240
Query: 238 DLVAVKEFLTS 248
DL AV+EFLTS
Sbjct: 241 DLAAVQEFLTS 251
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|242096638|ref|XP_002438809.1| hypothetical protein SORBIDRAFT_10g026570 [Sorghum bicolor] gi|241917032|gb|EER90176.1| hypothetical protein SORBIDRAFT_10g026570 [Sorghum bicolor] | Back alignment and taxonomy information |
|---|
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 200/247 (80%), Positives = 231/247 (93%)
Query: 1 MALLSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKN 60
M+LLS+LR ITVDVTGTL+AYKG LGDYYCMAAKS G+PCPDY R+HEGFKLAY EMA+
Sbjct: 1 MSLLSKLRLITVDVTGTLIAYKGHLGDYYCMAAKSAGMPCPDYNRMHEGFKLAYTEMARQ 60
Query: 61 YPCFGFAAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQ 120
YPCFGFAAKMPNI WW+TCV++SFV+AGYDYDE+TFEKIFRRIY++FGSSAPY+ FPD+Q
Sbjct: 61 YPCFGFAAKMPNIEWWRTCVKNSFVKAGYDYDEETFEKIFRRIYSAFGSSAPYSAFPDAQ 120
Query: 121 PFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEI 180
PF+RWAREKGLIVG++SNAEYRY+DVILPALG+NQG+EWDFGVFSG+ GVEKPDPRIY+I
Sbjct: 121 PFMRWAREKGLIVGVVSNAEYRYKDVILPALGLNQGSEWDFGVFSGMVGVEKPDPRIYKI 180
Query: 181 ALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLV 240
ALE AGN+APEEALHIGDS RKDY PA+S+GMHALL+DRFKT DA+ WR+SGA VLPDLV
Sbjct: 181 ALEMAGNVAPEEALHIGDSMRKDYTPARSIGMHALLLDRFKTADAESWRQSGATVLPDLV 240
Query: 241 AVKEFLT 247
A +E+LT
Sbjct: 241 ATQEWLT 247
|
Source: Sorghum bicolor Species: Sorghum bicolor Genus: Sorghum Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 206/240 (85%), Positives = 227/240 (94%)
Query: 10 ITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAK 69
+T VTGTL+AYKGELGDYYCMAAK+ G PCPDY+R+HEGFKLAYKEMAKNYPCFG AAK
Sbjct: 25 LTQYVTGTLMAYKGELGDYYCMAAKAAGKPCPDYQRMHEGFKLAYKEMAKNYPCFGHAAK 84
Query: 70 MPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREK 129
MPNIVWWKTCVRDSFVRAGY+YDE+TFEKIFRRIYASFGSSAPYTVFPDSQPFLRW R +
Sbjct: 85 MPNIVWWKTCVRDSFVRAGYEYDEETFEKIFRRIYASFGSSAPYTVFPDSQPFLRWLRGE 144
Query: 130 GLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIA 189
GL VGI+SNAEYRYQDVILPALG+N+G+EWDFGVFSGLEGVEKP+P+IYEIALERAGNIA
Sbjct: 145 GLKVGIVSNAEYRYQDVILPALGLNEGSEWDFGVFSGLEGVEKPNPKIYEIALERAGNIA 204
Query: 190 PEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKEFLTSE 249
PEEALHIGDS RKDY PAKS+GMHALL+DRFKTPDA EWRKSGA+VLPDL+A KE+L ++
Sbjct: 205 PEEALHIGDSMRKDYEPAKSIGMHALLLDRFKTPDAVEWRKSGAVVLPDLLAAKEWLLTQ 264
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 253 | ||||||
| TAIR|locus:2156299 | 255 | AT5G44730 [Arabidopsis thalian | 0.996 | 0.988 | 0.791 | 6.6e-113 | |
| UNIPROTKB|F1NN49 | 239 | HDHD3 "Uncharacterized protein | 0.826 | 0.874 | 0.314 | 1.3e-27 | |
| UNIPROTKB|Q5E9D6 | 251 | HDHD3 "Haloacid dehalogenase-l | 0.833 | 0.840 | 0.341 | 1.7e-27 | |
| MGI|MGI:1919998 | 251 | Hdhd3 "haloacid dehalogenase-l | 0.833 | 0.840 | 0.331 | 2.2e-27 | |
| ZFIN|ZDB-GENE-040724-118 | 242 | hdhd3 "haloacid dehalogenase-l | 0.818 | 0.855 | 0.333 | 1.9e-26 | |
| RGD|1585262 | 251 | Hdhd3 "haloacid dehalogenase-l | 0.833 | 0.840 | 0.313 | 8.4e-26 | |
| UNIPROTKB|Q9BSH5 | 251 | HDHD3 "Haloacid dehalogenase-l | 0.833 | 0.840 | 0.327 | 2.9e-25 | |
| UNIPROTKB|E2R983 | 251 | HDHD3 "Uncharacterized protein | 0.810 | 0.816 | 0.331 | 3.6e-25 | |
| FB|FBgn0029712 | 246 | CG15912 [Drosophila melanogast | 0.861 | 0.886 | 0.334 | 1.6e-22 | |
| FB|FBgn0016715 | 260 | Reg-2 "Rhythmically expressed | 0.833 | 0.811 | 0.312 | 1.7e-20 |
| TAIR|locus:2156299 AT5G44730 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1114 (397.2 bits), Expect = 6.6e-113, P = 6.6e-113
Identities = 201/254 (79%), Positives = 234/254 (92%)
Query: 1 MALLSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKN 60
++LLS+LRCITVDVTGTL+AYKGELGDYYCMAAK++GLPCPDYKRVHEGFKLAY +MA+
Sbjct: 3 VSLLSKLRCITVDVTGTLIAYKGELGDYYCMAAKAIGLPCPDYKRVHEGFKLAYTDMAQK 62
Query: 61 YPCFGFAAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQ 120
YPCFGF AKMPNIVWWKTCVRDSFV+AGY+YDE+TFEKIFRRIY++FGS+APY+VF DSQ
Sbjct: 63 YPCFGFHAKMPNIVWWKTCVRDSFVKAGYEYDEETFEKIFRRIYSTFGSAAPYSVFQDSQ 122
Query: 121 PFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEI 180
PFLRWAR KGLIVG++SNAEYRYQ+VILP+ G+++ EWDFGVFSG+EG+EKPDPRI+ +
Sbjct: 123 PFLRWARRKGLIVGLVSNAEYRYQEVILPSFGLSKA-EWDFGVFSGIEGIEKPDPRIFTL 181
Query: 181 ALERAGN-IAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDL 239
ALERAGN IAPEE LHIGDS RKDYVPAKS+GMHALLVDRFKT AK+W ++GAIVLPDL
Sbjct: 182 ALERAGNNIAPEEVLHIGDSMRKDYVPAKSIGMHALLVDRFKTEAAKDWIEAGAIVLPDL 241
Query: 240 VAVKEFLTSEISAC 253
VAV++ L S+ C
Sbjct: 242 VAVQQLLESDKLKC 255
|
|
| UNIPROTKB|F1NN49 HDHD3 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 68/216 (31%), Positives = 119/216 (55%)
Query: 2 ALLSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNY 61
A+L RLR +T DV TLL + +G Y A++ G+ + + + F+ AY+ ++ +
Sbjct: 1 AML-RLRLLTWDVKDTLLRLRRPVGLIYAAEAQAHGVQVQP-EALSQSFQAAYRAQSRRF 58
Query: 62 PCFGFAAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQP 121
P +G A + + WW V+++F G +++ I +Y + S+ + + P++
Sbjct: 59 PNYGRAEGLSSRQWWVDVVKETFRLTGV-HEDTVLTLIAENLYRDYCSARNWELLPEASE 117
Query: 122 FLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIA 181
L W + GL +G++SN + R + +++ N + F + S GV KPDP+I++ A
Sbjct: 118 TLSWCHQHGLRMGVVSNFDNRLESILVQC---NLRHHFHFVLTSEAVGVAKPDPKIFKAA 174
Query: 182 LERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLV 217
L R G + PE+A HIGD + KDY A+ VGMH+ L+
Sbjct: 175 L-RLGGVLPEQAAHIGDDYSKDYRAAREVGMHSFLL 209
|
|
| UNIPROTKB|Q5E9D6 HDHD3 "Haloacid dehalogenase-like hydrolase domain-containing protein 3" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 74/217 (34%), Positives = 119/217 (54%)
Query: 1 MALLSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKN 60
MA +LR +T DV TLL + +G Y A++ GL + + + FK AYK +++
Sbjct: 1 MAHRLQLRLLTWDVKDTLLRLRHPVGVEYATKARAHGLEV-EATALGQAFKQAYKAQSQS 59
Query: 61 YPCFGFAAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQ 120
+P +G + + WW V+ +F +AG D I ++Y F S + + V ++
Sbjct: 60 FPNYGLGHGLTSHQWWLDLVQQTFHQAGVR-DAQAVAPIAEQLYKDFSSPSTWQVLEGAE 118
Query: 121 PFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEI 180
LR R++GL + ++SN + R +D IL +G+ + +DF + S G KPDPRI+
Sbjct: 119 ATLRGCRKRGLKLAVVSNFDRRLED-ILEGVGLRE--HFDFVLTSEAAGWPKPDPRIFHE 175
Query: 181 ALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLV 217
AL A + P HIGDS+++DY A++VGMH+ LV
Sbjct: 176 ALHLA-QVEPAVGAHIGDSYQRDYKGARAVGMHSFLV 211
|
|
| MGI|MGI:1919998 Hdhd3 "haloacid dehalogenase-like hydrolase domain containing 3" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 72/217 (33%), Positives = 119/217 (54%)
Query: 1 MALLSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKN 60
MA ++R +T DV TL+ + +G+ Y A++ G+ D V + F+ AY+ + N
Sbjct: 1 MAHRLQMRLLTWDVKDTLIKLRRPVGEEYASKARAHGVVVEDIT-VEQAFRQAYRAQSHN 59
Query: 61 YPCFGFAAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQ 120
+P +G + + + WWK V +F AG D + ++Y F S + V ++
Sbjct: 60 FPNYGLSRGLTSRQWWKDVVLHTFRLAGVP-DAQAMTPVADQLYEDFSSPFTWQVLEGAE 118
Query: 121 PFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEI 180
L+ R++GL + ++SN + R +D IL LG+ + +DF + S G KPDPRI+
Sbjct: 119 MTLKGCRKRGLKLAVVSNFDRRLED-ILTGLGLRE--HFDFVLTSEAVGCPKPDPRIFRE 175
Query: 181 ALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLV 217
AL+RA + P A H+GDS+ DY +++VGMH+ LV
Sbjct: 176 ALQRAC-VEPAVAAHVGDSYLCDYQGSQAVGMHSFLV 211
|
|
| ZFIN|ZDB-GENE-040724-118 hdhd3 "haloacid dehalogenase-like hydrolase domain containing 3" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 71/213 (33%), Positives = 112/213 (52%)
Query: 7 LRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGF 66
+R + DV TLL + +G+ YC A+ GL +V F+LAYK+ ++ P +G
Sbjct: 5 VRWVLWDVKDTLLKVRRSVGEQYCREAQQAGLQLSP-AQVETAFRLAYKQKSQLLPNYGR 63
Query: 67 AAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWA 126
A M + VWW VRD+F + G +D +K+ +Y +F + VF DS L+
Sbjct: 64 AQGMDSQVWWTGLVRDTFGQCGV-HDPALLDKLANNLYHNFCGPENWEVFSDSNSTLKSC 122
Query: 127 REKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAG 186
GL G++SN + R + ++ G T + F V S V KPDP I+ ALER G
Sbjct: 123 TALGLKQGVVSNFDRRLEGILR---GCGLLTHFSFIVTSEDARVAKPDPAIFSQALERCG 179
Query: 187 NIAPEEALHIGDSFRKDYVPAKSVGMHALLVDR 219
+ +H+GD + KDY+ ++S+G+ L++R
Sbjct: 180 -VPASSVVHVGDHYVKDYLTSRSLGIRGYLLNR 211
|
|
| RGD|1585262 Hdhd3 "haloacid dehalogenase-like hydrolase domain containing 3" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 68/217 (31%), Positives = 118/217 (54%)
Query: 1 MALLSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKN 60
MA ++R +T DV TL+ + +G+ Y A++ G+ + V + F+ A++ + +
Sbjct: 1 MAHRLQMRLLTWDVKDTLIKVRRPVGEEYASKARAHGV-LVEATAVEQAFRQAFRAQSHS 59
Query: 61 YPCFGFAAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQ 120
+P +G + + + WW V +F AG D + ++Y F S + V ++
Sbjct: 60 FPNYGLSLGLTSRQWWMDVVLHTFRLAGVP-DAQAMAPVADQLYEDFSSPFAWRVLEGAE 118
Query: 121 PFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEI 180
L+ R++G+ + ++SN + R +D IL LG+ + +DF + S G KPDPRI+
Sbjct: 119 TTLKGCRKRGMKLAVVSNFDRRLED-ILTGLGLRE--HFDFVLTSEAVGCPKPDPRIFRE 175
Query: 181 ALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLV 217
AL+ A + P A H+GDS+R DY A++VGMH+ LV
Sbjct: 176 ALQLAC-VEPSAAAHVGDSYRCDYQGARAVGMHSFLV 211
|
|
| UNIPROTKB|Q9BSH5 HDHD3 "Haloacid dehalogenase-like hydrolase domain-containing protein 3" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 71/217 (32%), Positives = 115/217 (52%)
Query: 1 MALLSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKN 60
MA ++R +T DV TLL + LG+ Y A++ GL + + +GF+ AY+ + +
Sbjct: 1 MAHRLQIRLLTWDVKDTLLRLRHPLGEAYATKARAHGLEV-EPSALEQGFRQAYRAQSHS 59
Query: 61 YPCFGFAAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQ 120
+P +G + + + WW V +F AG D I ++Y F + V ++
Sbjct: 60 FPNYGLSHGLTSRQWWLDVVLQTFHLAGVQ-DAQAVAPIAEQLYKDFSHPCTWQVLDGAE 118
Query: 121 PFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEI 180
LR R +GL + +ISN + R + IL LG+ + +DF + S G KPDPRI++
Sbjct: 119 DTLRECRTRGLRLAVISNFDRRLEG-ILGGLGLRE--HFDFVLTSEAAGWPKPDPRIFQE 175
Query: 181 ALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLV 217
AL R ++ P A H+GD++ DY ++VGMH+ LV
Sbjct: 176 AL-RLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLV 211
|
|
| UNIPROTKB|E2R983 HDHD3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 70/211 (33%), Positives = 110/211 (52%)
Query: 7 LRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGF 66
+R +T DV TLL + +G+ Y A++ GL + + + F+ AY+ + ++P +G
Sbjct: 7 IRLLTWDVKDTLLRLRHPVGEEYAAKARAHGLEV-EAATLGQAFRQAYRTQSHSFPNYGL 65
Query: 67 AAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWA 126
+ + + WW V +F AG D I ++Y F + V + LR
Sbjct: 66 SQGLTSRRWWLDVVLQTFYLAGVR-DAQAVAPIADQLYEDFSKPCTWQVLEGAAATLRGC 124
Query: 127 REKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAG 186
R++GL + ++SN + R +D IL LG+ + +DF + S G KPDPRI+ AL R
Sbjct: 125 RKRGLRLAVVSNFDRRLED-ILTGLGLRE--HFDFVLTSEAAGWPKPDPRIFHEAL-RLA 180
Query: 187 NIAPEEALHIGDSFRKDYVPAKSVGMHALLV 217
+ P A HIGDS+ DY A+ VGMH+ LV
Sbjct: 181 QVEPAGAAHIGDSYLCDYKGAQGVGMHSFLV 211
|
|
| FB|FBgn0029712 CG15912 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 75/224 (33%), Positives = 115/224 (51%)
Query: 1 MALLSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKN 60
+A L R R +T DVT TLL + L Y+ A+ G+ D +R+ + F+ +K M+
Sbjct: 8 VANLKRFRLVTFDVTDTLLRLEDPLRQYH-QTAEEFGVTGVDRRRLEQCFRQQFKAMSSE 66
Query: 61 YPCFG-FAAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDS 119
+P FG ++ + WW V +F + + EKI +R+ + F +SA ++ +
Sbjct: 67 HPNFGRYSPGLDWQRWWLQLVARTFSCVDHGLAPEKLEKIGQRLISVFRTSACWSHVNGA 126
Query: 120 QPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYE 179
Q ++ R G VGIISN + V L A+G G ++DF + S GV KP+ I+E
Sbjct: 127 QELVQNVRNAGKCVGIISNFDSSLPQV-LDAMGF-AG-KFDFILTSYEAGVMKPERGIFE 183
Query: 180 IALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTP 223
I L+R I E+ALHIG+ DY A++ G LLV P
Sbjct: 184 IPLQRL-QIPAEQALHIGNKLDMDYEGARNCGWSGLLVSNADNP 226
|
|
| FB|FBgn0016715 Reg-2 "Rhythmically expressed gene 2" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 71/227 (31%), Positives = 109/227 (48%)
Query: 1 MALLSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKN 60
M LSR R IT DVT TLL ++ G Y G C D + + FK + +M ++
Sbjct: 1 MRSLSRFRLITFDVTNTLLQFRTTPGKQYGEIGALFGARC-DNNELAKNFKANWYKMNRD 59
Query: 61 YPCFGFAA--KMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPD 118
YP FG +M WW+ + +F +G ++ + + +S +
Sbjct: 60 YPNFGRDTNPQMEWQQWWRKLIAGTFAESGAAIPDEKLHNFSNHLIELYKTSICWQPCNG 119
Query: 119 SQPFLRWAREK----GLIVGIISNAEYRYQDVILPALGVNQGTEW--DFGVFSGLEGVEK 172
S L+ R++ +G+I+N + R LP L N + DF + S EK
Sbjct: 120 SVELLQQLRKELKPEKCKLGVIANFDPR-----LPTLLQNTKLDQYLDFAINSYEVQAEK 174
Query: 173 PDPRIYEIALERAG--NIAPEEALHIGDSFRKDYVPAKSVGMHALLV 217
PDP+I++ A+E++G N+ PEE LHIGD DY+ AK +G H+ LV
Sbjct: 175 PDPQIFQKAMEKSGLKNLKPEECLHIGDGPTTDYLAAKELGWHSALV 221
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q5E9D6 | HDHD3_BOVIN | No assigned EC number | 0.3364 | 0.8339 | 0.8406 | yes | no |
| Q9BSH5 | HDHD3_HUMAN | No assigned EC number | 0.3087 | 0.8339 | 0.8406 | yes | no |
| Q9CYW4 | HDHD3_MOUSE | No assigned EC number | 0.3317 | 0.8339 | 0.8406 | yes | no |
| Q7T012 | HDHD3_DANRE | No assigned EC number | 0.3333 | 0.8181 | 0.8553 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.1.3 | 0.691 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 253 | |||
| TIGR02252 | 203 | TIGR02252, DREG-2, REG-2-like, HAD superfamily (su | 4e-88 | |
| COG1011 | 229 | COG1011, COG1011, Predicted hydrolase (HAD superfa | 9e-25 | |
| pfam13419 | 176 | pfam13419, HAD_2, Haloacid dehalogenase-like hydro | 3e-17 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 5e-16 | |
| TIGR02253 | 221 | TIGR02253, CTE7, HAD superfamily (subfamily IA) hy | 1e-15 | |
| TIGR02247 | 211 | TIGR02247, HAD-1A3-hyp, epoxide hydrolase N-termin | 6e-14 | |
| COG0546 | 220 | COG0546, Gph, Predicted phosphatases [General func | 3e-11 | |
| TIGR01549 | 162 | TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase sup | 2e-10 | |
| cd01427 | 139 | cd01427, HAD_like, Haloacid dehalogenase-like hydr | 5e-10 | |
| TIGR02254 | 224 | TIGR02254, YjjG/YfnB, HAD superfamily (subfamily I | 7e-10 | |
| TIGR01509 | 177 | TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase sup | 1e-08 | |
| pfam13242 | 74 | pfam13242, Hydrolase_like, HAD-hyrolase-like | 1e-07 | |
| COG0637 | 221 | COG0637, COG0637, Predicted phosphatase/phosphohex | 3e-06 | |
| TIGR01428 | 198 | TIGR01428, HAD_type_II, 2-haloalkanoic acid dehalo | 6e-06 | |
| PRK13223 | 272 | PRK13223, PRK13223, phosphoglycolate phosphatase; | 2e-05 | |
| COG2179 | 175 | COG2179, COG2179, Predicted hydrolase of the HAD s | 3e-05 | |
| TIGR01459 | 242 | TIGR01459, HAD-SF-IIA-hyp4, HAD-superfamily class | 4e-05 | |
| PRK09449 | 224 | PRK09449, PRK09449, dUMP phosphatase; Provisional | 7e-05 | |
| TIGR01460 | 236 | TIGR01460, HAD-SF-IIA, Haloacid Dehalogenase Super | 1e-04 | |
| TIGR01449 | 213 | TIGR01449, PGP_bact, 2-phosphoglycolate phosphatas | 1e-04 | |
| TIGR01662 | 132 | TIGR01662, HAD-SF-IIIA, HAD-superfamily hydrolase, | 1e-04 | |
| TIGR01458 | 257 | TIGR01458, HAD-SF-IIA-hyp3, HAD-superfamily subfam | 2e-04 | |
| PRK13222 | 226 | PRK13222, PRK13222, phosphoglycolate phosphatase; | 2e-04 | |
| COG0647 | 269 | COG0647, NagD, Predicted sugar phosphatases of the | 3e-04 | |
| TIGR03351 | 220 | TIGR03351, PhnX-like, phosphonatase-like hydrolase | 8e-04 | |
| TIGR02009 | 185 | TIGR02009, PGMB-YQAB-SF, beta-phosphoglucomutase f | 0.001 |
| >gnl|CDD|200170 TIGR02252, DREG-2, REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Score = 259 bits (664), Expect = 4e-88
Identities = 94/209 (44%), Positives = 134/209 (64%), Gaps = 6/209 (2%)
Query: 8 RCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFA 67
+ IT D GTLLA K +G+ YC A+ G+ + + F+ A+K M++ +P FGF+
Sbjct: 1 KLITFDAVGTLLALKEPVGEVYCEIARKYGVEVSPD-ELEQAFRRAFKAMSEAFPNFGFS 59
Query: 68 AKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAR 127
+ + WW+ VRD+F RAG D ++FEKIF +Y+ F + P+ V+PD+ L+ R
Sbjct: 60 SGLTPQQWWQKLVRDTFGRAG-VPDPESFEKIFEELYSYFATPEPWQVYPDAIKLLKDLR 118
Query: 128 EKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGN 187
E+GLI+G+ISN + R + + L ALG+ +DF V S G EKPDP+I++ ALERAG
Sbjct: 119 ERGLILGVISNFDSRLRGL-LEALGLL--EYFDFVVTSYEVGAEKPDPKIFQEALERAG- 174
Query: 188 IAPEEALHIGDSFRKDYVPAKSVGMHALL 216
I+PEEALHIGDS R DY A++ G ALL
Sbjct: 175 ISPEEALHIGDSLRNDYQGARAAGWRALL 203
|
This family of proteins includes uncharacterized sequences from eukaryotes, cyanobacteria and Leptospira as well as the DREG-2 protein from Drosophila melanogaster which has been identified as a rhythmically (diurnally) regulated gene. This family is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called 'capping domain', or the absence of such a domain. This family is a member of subfamily 1A in which the cap domain consists of a predicted alpha helical bundle found in between the first and second catalytic motifs. A distinctive feature of this family is a conserved tandem pair of tryptophan residues in the cap domain. The most divergent sequences included within the scope of this model are from plants and have "FW" at this position instead. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. Length = 203 |
| >gnl|CDD|223943 COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 98.1 bits (244), Expect = 9e-25
Identities = 56/245 (22%), Positives = 97/245 (39%), Gaps = 18/245 (7%)
Query: 4 LSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPC 63
+ ++ I D+ GTLL + +G+P + KL K A+
Sbjct: 1 MMMIKAILFDLDGTLLDFDSAEFRAVLAEFAEIGVP--ETLEELALLKLIEKLEARFLRG 58
Query: 64 FGFAAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFL 123
+ D ++ + A+ +P++ L
Sbjct: 59 EYTGEYGLTLERLLE--------LLERLLGDEDAELVEELLAALAKL--LPDYPEALEAL 108
Query: 124 RWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALE 183
+ +K +GI++N +Q+ L LG+ +D S GV KPDP I+E ALE
Sbjct: 109 KELGKK-YKLGILTNGARPHQERKLRQLGL--LDYFDAVFISEDVGVAKPDPEIFEYALE 165
Query: 184 RAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIV--LPDLVA 241
+ G + PEEAL +GDS D + A+++GM + ++R P + L +L+
Sbjct: 166 KLG-VPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAELLD 224
Query: 242 VKEFL 246
+ E L
Sbjct: 225 LLERL 229
|
Length = 229 |
| >gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 76.6 bits (189), Expect = 3e-17
Identities = 39/126 (30%), Positives = 53/126 (42%), Gaps = 8/126 (6%)
Query: 92 DEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPAL 151
D D + FPD LR + KG+ + I+SN + +L L
Sbjct: 59 DPDEILEALLEYNLESRLEP----FPDVVELLRRLKAKGVKLVILSNGSREAVERLLEKL 114
Query: 152 GVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVG 211
G+ +D S G KPDP YE LER G + PEE L I DS D A++ G
Sbjct: 115 GL--LDLFDAVFTSDDVGARKPDPEAYERVLERLG-LPPEEILFIDDSPE-DLEAARAAG 170
Query: 212 MHALLV 217
+ + V
Sbjct: 171 IKTVHV 176
|
Length = 176 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 73.5 bits (180), Expect = 5e-16
Identities = 41/207 (19%), Positives = 77/207 (37%), Gaps = 22/207 (10%)
Query: 7 LRCITVDVTGTLLAYKGELGDY--YCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCF 64
++ + D+ GTL + + + AA ++G+ A A
Sbjct: 1 IKAVVFDLDGTLTDGEPVVPEAEALLEAAAALGV--------------AIVIAAGENLTK 46
Query: 65 GFAAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLR 124
++ + + + + + + ++P ++ L+
Sbjct: 47 EGREELVRRLLLRALAGEELLEELLRAGATVVAVLDLVVLGLIA--LTDPLYPGAREALK 104
Query: 125 WAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALER 184
+E G+ + I++ + I LG+ GL GV KPDP+I+E+ALE
Sbjct: 105 ELKEAGIKLAILTGDNRLTANAIARLLGLF--DALVSADLYGLVGVGKPDPKIFELALEE 162
Query: 185 AGNIAPEEALHIGDSFRKDYVPAKSVG 211
G + PEE L +GD D AK+ G
Sbjct: 163 LG-VKPEEVLMVGDGV-NDIPAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|162787 TIGR02253, CTE7, HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Score = 73.2 bits (180), Expect = 1e-15
Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 3/114 (2%)
Query: 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKP 173
V+P + L RE G +GII++ Q L LGV +D + S EGVEKP
Sbjct: 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRD--FFDAVITSEEEGVEKP 151
Query: 174 DPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKE 227
P+I+ AL+R G + PEEA+ +GD KD AK++GM + +++ K+ ++
Sbjct: 152 HPKIFYAALKRLG-VKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQGKSSKMED 204
|
This family of sequences from archaea and metazoans includes the human uncharacterized protein CTE7. Pyrococcus species appear to have three different forms of this enzyme, so it is unclear whether all members of this family have the same function. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Length = 221 |
| >gnl|CDD|233800 TIGR02247, HAD-1A3-hyp, epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Score = 68.3 bits (167), Expect = 6e-14
Identities = 39/146 (26%), Positives = 60/146 (41%), Gaps = 15/146 (10%)
Query: 90 DYDEDTFEKIFRRIYA----SFGSSAPYTV---------FPDSQPFLRWAREKGLIVGII 136
+ + F+ +FR Y AP P ++ R KG I
Sbjct: 57 ELTAEAFDGLFRHEYGLRLGHDVRIAPVFPLLYGENTKLRPSMMAAIKTLRAKGFKTACI 116
Query: 137 SNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHI 196
+N L + +D V S LEG+ KPDPRIY++ LER G +APEE + +
Sbjct: 117 TNNFPTDHSAEEALLPGDIMALFDAVVESCLEGLRKPDPRIYQLMLERLG-VAPEECVFL 175
Query: 197 GDSFRKDYVPAKSVGMHALLVDRFKT 222
D + PA ++G+ + V +
Sbjct: 176 -DDLGSNLKPAAALGITTIKVSDEEQ 200
|
This model represents a small clade of sequences including C. elegans and mammalian sequences as well as a small number of bacteria. In eukaryotes, this domain exists as an N-terminal fusion to the soluble epoxide hydrolase enzyme and has recently been shown to be an active phosphatase, although the nature of the biological substrate is unclear. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. Length = 211 |
| >gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Score = 60.9 bits (148), Expect = 3e-11
Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 94 DTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGV 153
+ + F YA S + + L + G +GI++N R D++L ALG+
Sbjct: 72 ERLREEFLTAYAELLESRLFPGVKE---LLAALKSAGYKLGIVTNKPERELDILLKALGL 128
Query: 154 NQGTEWDFGVFSGLEGVE--KPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVG 211
F V G + V KPDP + LE+ G + PEEAL +GDS D + AK+ G
Sbjct: 129 AD----YFDVIVGGDDVPPPKPDPEPLLLLLEKLG-LDPEEALMVGDSLN-DILAAKAAG 182
Query: 212 MHALLVD 218
+ A+ V
Sbjct: 183 VPAVGVT 189
|
Length = 220 |
| >gnl|CDD|233463 TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Score = 57.8 bits (140), Expect = 2e-10
Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 10/123 (8%)
Query: 89 YDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVIL 148
+ + E++ I + L +E G+ +GIISN R Q ++
Sbjct: 50 WRIATEALEELQGHIGYDAEEAYIPGAAD----LLPRLKEAGIKLGIISNGSLRAQKLL- 104
Query: 149 PALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAK 208
L + ++ + E KP+P I+ ALE G P E LH+GD+ D A+
Sbjct: 105 --LRKHGLGDYFELILGSDEIGSKPEPEIFLAALESLGV--PPEVLHVGDNLS-DIKGAR 159
Query: 209 SVG 211
+ G
Sbjct: 160 NAG 162
|
This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single representation is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)(D/E), (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 1 (this model) is found in the enzymes phosphoglycolate phosphatase (TIGR01449) and enolase-phosphatase. These three variant models (see also TIGR01493 and TIGR01509) were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 162 |
| >gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Score = 55.8 bits (135), Expect = 5e-10
Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 16/118 (13%)
Query: 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQG-----TEWDFGVFSGLE 168
++P + L+ +EKG+ + + +N R +L LG++ T ++ E
Sbjct: 24 ELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKE 83
Query: 169 GVE---------KPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLV 217
G+ KP+P AL+ G + PEE L +GDS D AK+ G + V
Sbjct: 84 GLFLGGGPFDIGKPNPDKLLAALKLLG-VDPEEVLMVGDSLN-DIEMAKAAGGLGVAV 139
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139 |
| >gnl|CDD|162788 TIGR02254, YjjG/YfnB, HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Score = 57.1 bits (138), Expect = 7e-10
Identities = 33/139 (23%), Positives = 54/139 (38%), Gaps = 10/139 (7%)
Query: 88 GYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVI 147
+ DE + + R + + P + + ++K + I++N Q
Sbjct: 76 NTEADEALLNQKYLRFLEE-----GHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKR 129
Query: 148 LPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPA 207
L G+ +D S G++KPD I+ ALER + EE L IGDS D
Sbjct: 130 LRKSGLFP--FFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEVLMIGDSLTADIKGG 187
Query: 208 KSVGMHALL--VDRFKTPD 224
++ G+ D PD
Sbjct: 188 QNAGLDTCWMNPDMHPNPD 206
|
This family consists of uncharacterized proteobacterial and gram positive bacterial sequences including YjjG from E. coli and YfnB from B. subtilis. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. Length = 224 |
| >gnl|CDD|233443 TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 1e-08
Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 16/131 (12%)
Query: 92 DEDTFEKIFRRIYASF--GSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILP 149
ED + Y + P P + L R +G + +++N+ R ++
Sbjct: 58 AEDAQLLYKQLFYEALEKEGLKPL---PGVRALLEALRARGKKLALLTNS-PRADAKLVL 113
Query: 150 ALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDS---FRKDYVP 206
LG+ +D + S G+ KPDP IY AL++ G + P E L + DS
Sbjct: 114 ELGLRA--LFDVVIDSSDVGLGKPDPDIYLQALKKLG-LKPSECLFVDDSPAGID----A 166
Query: 207 AKSVGMHALLV 217
AK+ GMH +LV
Sbjct: 167 AKAAGMHTVLV 177
|
This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that representing it with a single model is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 3 (this model) is found in the enzymes beta-phosphoglucomutase (TIGR01990) and deoxyglucose-6-phosphatase, while many other enzymes of subfamily IA exhibit this variant as well as variant 1 (TIGR01549). These three variant models were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 177 |
| >gnl|CDD|222003 pfam13242, Hydrolase_like, HAD-hyrolase-like | Back alignment and domain information |
|---|
Score = 47.3 bits (113), Expect = 1e-07
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 172 KPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKS 231
KP+P + ALER G + PEE + IGDS D + A++ G+ +LV T
Sbjct: 4 KPNPGMLRAALERLG-VDPEECVMIGDSDT-DILAARAAGIRTILV---LTGVTTAEDLE 58
Query: 232 GAIVLPDLVA 241
A PD V
Sbjct: 59 RAPGRPDYVV 68
|
Length = 74 |
| >gnl|CDD|223710 COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Score = 46.7 bits (111), Expect = 3e-06
Identities = 45/208 (21%), Positives = 73/208 (35%), Gaps = 15/208 (7%)
Query: 45 RVHEGFKLAYKEMAKNYPCFGFAAKMPNI----VWWKTCVRDSFVRAGYDYDEDTFEKIF 100
+H A+ E K Y ++ + + + D E++
Sbjct: 18 PLHA---RAWLEALKEYGIEISDEEIRELHGGGIARIIDLLRKLAAGEDPADLAELERLL 74
Query: 101 RRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWD 160
A P L + +G+ + + S++ R + +L LG+ +D
Sbjct: 75 YEAEALELEGLK--PIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLD--YFD 130
Query: 161 FGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLV-DR 219
V + KP P IY +A ER G + PEE + + DS AK+ GM + V
Sbjct: 131 VIVTADDVARGKPAPDIYLLAAERLG-VDPEECVVVEDSP-AGIQAAKAAGMRVVGVPAG 188
Query: 220 FKTPDAKEWRKSGAI-VLPDLVAVKEFL 246
P GA VL DL + L
Sbjct: 189 HDRPHLDPLDAHGADTVLLDLAELPALL 216
|
Length = 221 |
| >gnl|CDD|130495 TIGR01428, HAD_type_II, 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 6e-06
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 115 VFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVE--K 172
PD LR +E+G + I+SN ++ G++ +D V S + V K
Sbjct: 93 PHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDP--FD-AVLSA-DAVRAYK 148
Query: 173 PDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDR 219
P P++Y++ALE G + P+E L + + D AK G V+R
Sbjct: 149 PAPQVYQLALEALG-VPPDEVLFVASNPW-DLGGAKKFGFKTAWVNR 193
|
Catalyzes the hydrolytic dehalogenation of small L-2-haloalkanoic acids to yield the corresponding D-2-hydroxyalkanoic acids. Belongs to the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), class (subfamily) I. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. Length = 198 |
| >gnl|CDD|171912 PRK13223, PRK13223, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 44.5 bits (105), Expect = 2e-05
Identities = 31/114 (27%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Query: 99 IFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTE 158
+F YA S V+P + L+W +++G+ + +I+N R+ +L + + +
Sbjct: 88 LFMEAYAD--SHELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFR 145
Query: 159 WDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGM 212
W G + + +KPDP ++ AG + P ++L +GDS R D + AK+ G+
Sbjct: 146 WIIGGDTLPQ--KKPDPAALLFVMKMAG-VPPSQSLFVGDS-RSDVLAAKAAGV 195
|
Length = 272 |
| >gnl|CDD|225090 COG2179, COG2179, Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 3e-05
Identities = 32/113 (28%), Positives = 48/113 (42%), Gaps = 16/113 (14%)
Query: 117 PDSQPFLR-W---AREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEK 172
PD+ P LR W +E G+ V ++SN + LGV + +K
Sbjct: 45 PDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP-----------FIYRAKK 93
Query: 173 PDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDA 225
P R + AL+ N+ PEE + +GD D + GM +LV+ PD
Sbjct: 94 PFGRAFRRALKEM-NLPPEEVVMVGDQLFTDVLGGNRAGMRTILVEPLVAPDG 145
|
Length = 175 |
| >gnl|CDD|130526 TIGR01459, HAD-SF-IIA-hyp4, HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Score = 43.3 bits (102), Expect = 4e-05
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 10/79 (12%)
Query: 149 PALGVNQGTEWDFG------VFSGLEG----VEKPDPRIYEIALERAGNIAPEEALHIGD 198
P G+NQ + +G + L G KP P I+ AL+ NI L +GD
Sbjct: 162 PDRGINQHGIYRYGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRMLMVGD 221
Query: 199 SFRKDYVPAKSVGMHALLV 217
SF D + A +G+ LV
Sbjct: 222 SFYTDILGANRLGIDTALV 240
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily model). Length = 242 |
| >gnl|CDD|181865 PRK09449, PRK09449, dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 7e-05
Identities = 25/67 (37%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Query: 134 GIISNAEYRYQDVILPALGVNQGTE--WDFGVFSGLEGVEKPDPRIYEIALERAGNIAPE 191
GII+N Q V L G +D V S GV KPD I++ ALE+ GN
Sbjct: 114 GIITNGFTELQQVRLE----RTGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRS 169
Query: 192 EALHIGD 198
L +GD
Sbjct: 170 RVLMVGD 176
|
Length = 224 |
| >gnl|CDD|233422 TIGR01460, HAD-SF-IIA, Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 1e-04
Identities = 36/144 (25%), Positives = 51/144 (35%), Gaps = 17/144 (11%)
Query: 80 VRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNA 139
R+ F D D EKI + S Y + L +G + I +N
Sbjct: 101 FRNDFFD---DIDHLAIEKIPAAVIVGEPSDFSYDELAKAAYLLA----EGDVPFIAANR 153
Query: 140 EYRYQDVILPALGVNQ-GTEWDFGVFSGLEG-----VEKPDPRIYEIALERAGNIAPEEA 193
+ D++ G + G L G V KP P IY AL
Sbjct: 154 D----DLVRLGDGRFRPGAGAIAAGIKELSGREPTVVGKPSPAIYRAALNLLQARPERRD 209
Query: 194 LHIGDSFRKDYVPAKSVGMHALLV 217
+ +GD+ R D + AK+ G LLV
Sbjct: 210 VMVGDNLRTDILGAKNAGFDTLLV 233
|
This model represents one structural subclass of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The classes are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Class I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Class II consists of sequences in which the capping domain is found between the second and third motifs. Class III sequences have no capping domain in iether of these positions. The Class IIA capping domain is predicted by PSI-PRED to consist of a mixed alpha-beta fold with the basic pattern: Helix-Helix-Helix-Sheet-Helix-Loop-Sheet-Helix-Sheet- Helix. Presently, this subfamily encompasses a single equivalog model (TIGR01452) for the eukaryotic phosphoglycolate phosphatase, as well as four hypothetical equivalogs covering closely related sequences (TIGR01456 and TIGR01458 in eukaryotes, TIGR01457 in gram positive bacteria and TIGR01459 in gram negative bacteria). The Escherishia coli NagD gene and the Bacillus subtilus AraL gene are members of this subfamily but are not members of the any of the presently defined equivalogs within it. NagD is part of the NAG operon responsible for N-acetylglucosamine metabolism. The function of this gene is unknown. Genes from several organisms have been annotated as NagD, or NagD-like. However, without data on the presence of other members of this pathway, (such as in the case of Yersinia pestis) these assignments should not be given great weight. The AraL gene is similar: it is part of the L-arabinose operon, but the function is unknown. A gene from Halobacterium has been annotated as AraL, but no other Ara operon genes have been annotated. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant [Unknown function, Enzymes of unknown specificity]. Length = 236 |
| >gnl|CDD|130516 TIGR01449, PGP_bact, 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 1e-04
Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 98 KIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGT 157
K+F R Y VFP + L R KGL +G+++N +L LG+ +
Sbjct: 70 KLFDRHYEEVAGELTS-VFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAK-- 126
Query: 158 EWDFGVFSGLEGVE--KPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHAL 215
F V G + + KP P +A ER G +AP++ +++GDS R D A++ G ++
Sbjct: 127 --YFSVLIGGDSLAQRKPHPDPLLLAAERLG-VAPQQMVYVGDS-RVDIQAARAAGCPSV 182
Query: 216 LV 217
L+
Sbjct: 183 LL 184
|
PGP is an essential enzyme in the glycolate salvage pathway in higher organisms (photorespiration in plants). Phosphoglycolate results from the oxidase activity of RubisCO in the Calvin cycle when concentrations of carbon dioxide are low relative to oxygen. In Ralstonia (Alcaligenes) eutropha and Rhodobacter sphaeroides, the PGP gene (CbbZ) is located on an operon along with other Calvin cycle enzymes including RubisCO. The only other pertinent experimental evidence concerns the gene from E. coli. The in vitro activity of the Ralstonia and Escherichia enzymes was determined with crude cell extracts of strains containing PGP on expression plasmids and compared to controls. In E. coli, however, there does not appear to be a functional Calvin cycle (RubisCO is absent), although the E. coli PGP gene (gph) is on the same operon (dam) with ribulose-5-phosphate-3-epimerase (rpe), a gene in the pentose-phosphate pathway (along with other, unrelated genes). The E. coli enzyme is not expressed under normal laboratory conditions; the pathway to which it belongs has not been determined. In fact, the possibility exists, although unlikely, that the E. coli enzyme and others within this equivalog have as their physiological substrate another, closely related molecule. The other seed chosen for this model, from Xylella fastidiosa has no experimental evidence, but is a plant pathogen and thus may obtain phosphoglycolate from its host. This model has been restricted to encompass only proteobacteria as no related PGP has been verified outside of this clade. Sequences from Aquifex aeolicus and Treponema pallidum fall between the trusted and noise cutoffs. Just below the noise cutoff is a gene which is part of the operon for the biosynthesis of the blue pigment, indigoidine, from Erwinia (Pectobacterium) chrysanthemi, a plant pathogen. It does not seem likely, considering the proposed biosynthetic mechanism, that the dephosphorylation of phosphoglycolate or a closely related compound is required. Possibly, this gene is fortuitously located in this operon, or has an indirect relationship to the necessity for the biosynthesis of this compound. Sequences from 11 species have been annotated as PGP or putative PGP but fall below the noise cutoff. None of these have experimental validation. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702) [Energy metabolism, Sugars]. Length = 213 |
| >gnl|CDD|233517 TIGR01662, HAD-SF-IIIA, HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 1e-04
Identities = 27/111 (24%), Positives = 43/111 (38%), Gaps = 12/111 (10%)
Query: 116 FPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEW-------DFGVFSGLE 168
+P+ L +E G V I++N Q I + +
Sbjct: 27 YPEVPDALAELKEAGYKVVIVTN-----QSGIGRGKFSSGRVARRLEELGVPIDILYACP 81
Query: 169 GVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDR 219
KP P ++ AL+R I PEE++++GD D AK G+ +LV
Sbjct: 82 HCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAFILVAP 132
|
This subfamily falls within the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The Class III subfamilies are characterized by the lack of any domains located between either between the first and second conserved catalytic motifs (as in the Class I subfamilies, TIGR01493, TIGR01509, TIGR01488 and TIGR01494) or between the second and third conserved catalytic motifs (as in the Class II subfamilies, TIGR01460 and TIGR01484) of the superfamily domain. The IIIA subfamily contains five major clades: histidinol-phosphatase (TIGR01261) and histidinol-phosphatase-related protein (TIGR00213) which together form a subfamily (TIGR01656), DNA 3'-phosphatase (TIGR01663, TIGR01664), YqeG (TIGR01668) and YrbI (TIGR01670). In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme [Unknown function, Enzymes of unknown specificity]. Length = 132 |
| >gnl|CDD|162372 TIGR01458, HAD-SF-IIA-hyp3, HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 2e-04
Identities = 27/83 (32%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Query: 136 ISNAEYRYQDVILPALGVNQ-GTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEAL 194
I Y Y+ AL V T ++ + V KP + AL RA PEEA+
Sbjct: 143 IGKGRY-YKRKDGLALDVGPFVTALEYATDTKATVVGKPSKTFFLEAL-RATGCEPEEAV 200
Query: 195 HIGDSFRKDYVPAKSVGMHALLV 217
IGD R D A+ GM + V
Sbjct: 201 MIGDDCRDDVGGAQDCGMRGIQV 223
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published [Unknown function, Enzymes of unknown specificity]. Length = 257 |
| >gnl|CDD|237310 PRK13222, PRK13222, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 40.9 bits (97), Expect = 2e-04
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 24/150 (16%)
Query: 80 VRDSFVRAGYDYDEDTFEK---IFRRIYA---SFGSSAPYTVFPDSQPFLRWAREKGLIV 133
V + AG + DE+ EK +F R YA + GS ++P + L + G +
Sbjct: 57 VERALTWAGREPDEELLEKLRELFDRHYAENVAGGS----RLYPGVKETLAALKAAGYPL 112
Query: 134 GIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEG-----VEKPDPRIYEIALERAGNI 188
+++N + +L ALG+ FS + G +KPDP +A E+ G +
Sbjct: 113 AVVTNKPTPFVAPLLEALGI-------ADYFSVVIGGDSLPNKKPDPAPLLLACEKLG-L 164
Query: 189 APEEALHIGDSFRKDYVPAKSVGMHALLVD 218
PEE L +GDS R D A++ G ++ V
Sbjct: 165 DPEEMLFVGDS-RNDIQAARAAGCPSVGVT 193
|
Length = 226 |
| >gnl|CDD|223720 COG0647, NagD, Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 3e-04
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 172 KPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLV 217
KP P IYE ALE+ G E L +GD D + AK+ G+ LLV
Sbjct: 190 KPSPAIYEAALEKLGLD-RSEVLMVGDRLDTDILGAKAAGLDTLLV 234
|
Length = 269 |
| >gnl|CDD|234176 TIGR03351, PhnX-like, phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Score = 39.4 bits (92), Expect = 8e-04
Identities = 33/158 (20%), Positives = 54/158 (34%), Gaps = 4/158 (2%)
Query: 87 AGYDYDEDTFEKI---FRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRY 143
A DE + F A P P ++ R R G+ V + + +
Sbjct: 57 AADGADEAEAQAAFADFEERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDT 116
Query: 144 QDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKD 203
+ +L LG G + D V +P P + A+E G + GD+ D
Sbjct: 117 AERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQSVAVAGDT-PND 175
Query: 204 YVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVA 241
+ G A++ DA+E + + D VA
Sbjct: 176 LEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDSVA 213
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the substrate is also, like Pald, a 2-oxo-ethylphosphonate. Despite this, the genomic context of members of this family are quite distinct from PhnX, which is almost invariably associated with the 2-aminoethylphosphonate transaminase PhnW (TIGR02326), the source of the substrate Pald. Members of this clade are never associated with PhnW, but rather associate with families of FAD-dependent oxidoreductases related to deaminating amino acid oxidases (pfam01266) as well as zinc-dependent dehydrogenases (pfam00107). Notably, family members from Arthrobacter aurescens TC1 and Nocardia farcinica IFM 10152 are adjacent to the PhnCDE ABC cassette phosphonates transporter (GenProp0236) typically found in association with the phosphonates C-P lyase system (GenProp0232). These observations suggest two possibilities. First, the substrate for this enzyme family is also Pald, the non-association with PhnW not withstanding. Alternatively, the substrate is something very closely related such as hydroxyphosphonoacetaldehyde (Hpald). Hpald could come from oxidative deamination of 1-hydroxy-2-aminoethylphosphonate (HAEP) by the associated oxidase. HAEP would not be a substrate for PhnW due to its high specificity for AEP. HAEP has been shown to be a constituent of the sphingophosphonolipid of Bacteriovorax stolpii, and presumably has other natural sources. If Hpald is the substrate, the product would be glycoaldehyde (hydroxyacetaldehyde), and the associated alcohol dehydrogenase may serve to convert this to glycol. Length = 220 |
| >gnl|CDD|213673 TIGR02009, PGMB-YQAB-SF, beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Score = 38.1 bits (89), Expect = 0.001
Identities = 28/127 (22%), Positives = 43/127 (33%), Gaps = 30/127 (23%)
Query: 87 AGYDYDEDTFEKIFRR---IYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIIS---NAE 140
G + ++ R +Y V P + L+ + KG+ VG+ S NA
Sbjct: 58 RGDGLSLEEIHQLAERKNELYRELLRLTGVAVLPGIRNLLKRLKAKGIAVGLGSSSKNAP 117
Query: 141 Y--------RYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEE 192
Y D I+ A V G KP P + +A E G + P E
Sbjct: 118 RILAKLGLRDYFDAIVDASEVKNG---------------KPHPETFLLAAELLG-VPPNE 161
Query: 193 ALHIGDS 199
+ D+
Sbjct: 162 CIVFEDA 168
|
This subfamily model groups together three clades: the characterized beta-phosphoglucomutases (including those from E.coli, B.subtilus and L.lactis, TIGR01990), a clade of putative bPGM's from mycobacteria and a clade including the uncharacterized E.coli and H.influenzae yqaB genes which may prove to be beta-mutases of a related 1-phosphosugar. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). Length = 185 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 253 | |||
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 100.0 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 100.0 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 100.0 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 100.0 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 100.0 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 100.0 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 100.0 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 100.0 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 100.0 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 100.0 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 100.0 | |
| KOG3085 | 237 | consensus Predicted hydrolase (HAD superfamily) [G | 100.0 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 100.0 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 100.0 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 100.0 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 100.0 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 99.98 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 99.98 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 99.98 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 99.97 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 99.97 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 99.97 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 99.97 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 99.97 | |
| PLN02940 | 382 | riboflavin kinase | 99.97 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 99.97 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 99.97 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 99.97 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 99.96 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 99.96 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 99.96 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 99.96 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 99.96 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 99.95 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.95 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 99.94 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 99.94 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 99.94 | |
| PLN02811 | 220 | hydrolase | 99.93 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 99.93 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 99.93 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 99.92 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 99.92 | |
| PLN02954 | 224 | phosphoserine phosphatase | 99.91 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 99.91 | |
| KOG2914 | 222 | consensus Predicted haloacid-halidohydrolase and r | 99.91 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 99.91 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 99.9 | |
| PRK06769 | 173 | hypothetical protein; Validated | 99.9 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 99.89 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 99.88 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 99.88 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 99.87 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 99.87 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 99.87 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 99.87 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.86 | |
| KOG3109 | 244 | consensus Haloacid dehalogenase-like hydrolase [Ge | 99.85 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 99.85 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 99.84 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 99.83 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 99.83 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.81 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 99.81 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 99.8 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 99.8 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 99.78 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 99.78 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 99.78 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 99.77 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 99.77 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 99.76 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 99.75 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.75 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 99.75 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 99.74 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.74 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 99.73 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 99.71 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.71 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 99.71 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 99.7 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.69 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 99.67 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.64 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 99.63 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 99.63 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 99.62 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 99.62 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 99.61 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 99.6 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 99.56 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 99.56 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 99.53 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 99.53 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.52 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 99.52 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 99.51 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 99.5 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 99.48 | |
| COG4229 | 229 | Predicted enolase-phosphatase [Energy production a | 99.48 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 99.48 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 99.45 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.43 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.42 | |
| PRK08238 | 479 | hypothetical protein; Validated | 99.42 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 99.41 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 99.4 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 99.39 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 99.38 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 99.38 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 99.37 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.36 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.34 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.33 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 99.33 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 99.31 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 99.31 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.28 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.27 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 99.27 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 99.26 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.25 | |
| PLN02887 | 580 | hydrolase family protein | 99.17 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 99.13 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 99.09 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 99.08 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.04 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 99.01 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 99.0 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.96 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.95 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.92 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 98.91 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 98.9 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 98.86 | |
| KOG2630 | 254 | consensus Enolase-phosphatase E-1 [Amino acid tran | 98.85 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.84 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 98.84 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 98.83 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 98.83 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 98.8 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 98.79 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 98.76 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 98.72 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.71 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 98.71 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 98.61 | |
| COG4996 | 164 | Predicted phosphatase [General function prediction | 98.58 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 98.5 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 98.49 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 98.42 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 98.4 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 98.39 | |
| COG2503 | 274 | Predicted secreted acid phosphatase [General funct | 98.35 | |
| COG5663 | 194 | Uncharacterized conserved protein [Function unknow | 98.35 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 98.29 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 98.29 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 98.26 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 98.24 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 98.22 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 98.21 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 98.15 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 98.12 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 98.09 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 98.08 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 98.05 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 98.02 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 98.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 98.0 | |
| COG5610 | 635 | Predicted hydrolase (HAD superfamily) [General fun | 97.96 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 97.93 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 97.89 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 97.88 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 97.82 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 97.8 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 97.79 | |
| PLN02499 | 498 | glycerol-3-phosphate acyltransferase | 97.72 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 97.69 | |
| KOG2961 | 190 | consensus Predicted hydrolase (HAD superfamily) [G | 97.65 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 97.6 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.58 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 97.58 | |
| PF05761 | 448 | 5_nucleotid: 5' nucleotidase family; InterPro: IPR | 97.54 | |
| KOG2470 | 510 | consensus Similar to IMP-GMP specific 5'-nucleotid | 97.53 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 97.47 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 97.46 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 97.46 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 97.4 | |
| COG3882 | 574 | FkbH Predicted enzyme involved in methoxymalonyl-A | 97.38 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 97.34 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 97.28 | |
| PF05152 | 297 | DUF705: Protein of unknown function (DUF705); Inte | 97.25 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 97.22 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 97.2 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 97.17 | |
| PF05822 | 246 | UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter | 97.09 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 96.99 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 96.88 | |
| TIGR01658 | 274 | EYA-cons_domain eyes absent protein conserved doma | 96.86 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 96.86 | |
| KOG2134 | 422 | consensus Polynucleotide kinase 3' phosphatase [Re | 96.78 | |
| PF06189 | 264 | 5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103 | 96.69 | |
| KOG2469 | 424 | consensus IMP-GMP specific 5'-nucleotidase [Nucleo | 96.68 | |
| PLN02423 | 245 | phosphomannomutase | 96.65 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 96.63 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 96.52 | |
| KOG3128 | 298 | consensus Uncharacterized conserved protein [Funct | 96.31 | |
| PLN02580 | 384 | trehalose-phosphatase | 95.94 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 95.82 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 95.81 | |
| KOG1618 | 389 | consensus Predicted phosphatase [General function | 95.81 | |
| KOG2116 | 738 | consensus Protein involved in plasmid maintenance/ | 95.77 | |
| PLN02580 | 384 | trehalose-phosphatase | 95.75 | |
| PLN02151 | 354 | trehalose-phosphatase | 95.59 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 95.33 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 95.32 | |
| COG4502 | 180 | 5'(3')-deoxyribonucleotidase [Nucleotide transport | 95.27 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 95.24 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 95.05 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 94.87 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 94.85 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 94.63 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 94.03 | |
| PLN02423 | 245 | phosphomannomutase | 93.73 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 93.68 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 93.64 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 93.52 | |
| KOG4549 | 144 | consensus Magnesium-dependent phosphatase [General | 92.97 | |
| KOG3107 | 468 | consensus Predicted haloacid dehalogenase-like hyd | 92.6 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 92.55 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 92.46 | |
| COG5083 | 580 | SMP2 Uncharacterized protein involved in plasmid m | 92.3 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 92.04 | |
| COG4850 | 373 | Uncharacterized conserved protein [Function unknow | 91.91 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 91.8 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 91.62 | |
| PF02571 | 249 | CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: | 91.51 | |
| PLN03017 | 366 | trehalose-phosphatase | 91.28 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 91.04 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 90.74 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 90.56 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 90.32 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 89.68 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 89.46 | |
| PLN02151 | 354 | trehalose-phosphatase | 89.44 | |
| PLN03017 | 366 | trehalose-phosphatase | 89.07 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 89.02 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 88.92 | |
| KOG3189 | 252 | consensus Phosphomannomutase [Lipid transport and | 88.9 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 88.74 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 88.48 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 88.26 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 88.24 | |
| KOG0323 | 635 | consensus TFIIF-interacting CTD phosphatases, incl | 87.78 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 87.71 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 87.69 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 87.34 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 86.89 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 86.77 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 86.47 | |
| COG0731 | 296 | Fe-S oxidoreductases [Energy production and conver | 86.07 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 84.64 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 84.52 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 83.2 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 82.89 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 82.16 |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-33 Score=209.35 Aligned_cols=210 Identities=18% Similarity=0.192 Sum_probs=160.6
Q ss_pred CceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHH
Q 039449 6 RLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFV 85 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (253)
++++|+||+||||+|+...+..++..++++++......+.+... .|. +..+. +.
T Consensus 2 ~~~~viFD~DGTL~ds~~~~~~a~~~~~~~~~~~~~~~~~~~~~--------------~G~----~~~~~--------~~ 55 (214)
T PRK13288 2 KINTVLFDLDGTLINTNELIISSFLHTLKTYYPNQYKREDVLPF--------------IGP----SLHDT--------FS 55 (214)
T ss_pred CccEEEEeCCCcCccCHHHHHHHHHHHHHHhCCCCCCHHHHHHH--------------hCc----CHHHH--------HH
Confidence 58999999999999999999999999999998654443433321 122 21221 22
Q ss_pred HcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeec
Q 039449 86 RAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFS 165 (253)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~ 165 (253)
... +...+.+...+...+.... .....++||+.++|+.|+++|++++|+||+....+...++.+|+.. +|+.++.+
T Consensus 56 ~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~--~f~~i~~~ 131 (214)
T PRK13288 56 KID-ESKVEEMITTYREFNHEHH-DELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDE--FFDVVITL 131 (214)
T ss_pred hcC-HHHHHHHHHHHHHHHHHhh-hhhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh--ceeEEEec
Confidence 211 1122333333433332221 1234789999999999999999999999999999999999999998 99999998
Q ss_pred cccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhh-hcCCcccCCHHHHHH
Q 039449 166 GLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWR-KSGAIVLPDLVAVKE 244 (253)
Q Consensus 166 ~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~-~~~~~~i~~l~el~~ 244 (253)
+.....||+|+.+..++++++ ++++++++|||+. +|+.+|+++|++++++.+ +......+. ..++++++++.++.+
T Consensus 132 ~~~~~~Kp~p~~~~~~~~~~~-~~~~~~~~iGDs~-~Di~aa~~aG~~~i~v~~-g~~~~~~l~~~~~~~~i~~~~~l~~ 208 (214)
T PRK13288 132 DDVEHAKPDPEPVLKALELLG-AKPEEALMVGDNH-HDILAGKNAGTKTAGVAW-TIKGREYLEQYKPDFMLDKMSDLLA 208 (214)
T ss_pred CcCCCCCCCcHHHHHHHHHcC-CCHHHEEEECCCH-HHHHHHHHCCCeEEEEcC-CCCCHHHHhhcCcCEEECCHHHHHH
Confidence 888889999999999999999 9999999999999 899999999999999984 433333332 335689999999998
Q ss_pred HHhh
Q 039449 245 FLTS 248 (253)
Q Consensus 245 ~l~~ 248 (253)
++..
T Consensus 209 ~i~~ 212 (214)
T PRK13288 209 IVGD 212 (214)
T ss_pred HHhh
Confidence 8753
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=206.71 Aligned_cols=215 Identities=26% Similarity=0.383 Sum_probs=163.1
Q ss_pred ccCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHH
Q 039449 4 LSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDS 83 (253)
Q Consensus 4 ~~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (253)
++++++|+||+||||+|+...+..++..+++++|.+....+.+.... |.+. ...+.+.
T Consensus 1 ~~~~~~iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--------------g~~~--------~~~~~~~ 58 (220)
T COG0546 1 MMMIKAILFDLDGTLVDSAEDILRAFNAALAELGLPPLDEEEIRQLI--------------GLGL--------DELIERL 58 (220)
T ss_pred CCCCCEEEEeCCCccccChHHHHHHHHHHHHHcCCCCCCHHHHHHHh--------------cCCH--------HHHHHHH
Confidence 35689999999999999999999999999999999876666655422 2220 0112111
Q ss_pred HHHcCCCCC---hHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCccee
Q 039449 84 FVRAGYDYD---EDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWD 160 (253)
Q Consensus 84 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~ 160 (253)
......... .+.....+...+.... +..++||+.++|..|+++|++++|+||.+...++..++.+|+.. +|+
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~--~F~ 133 (220)
T COG0546 59 LGEADEEAAAELVERLREEFLTAYAELL---ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLAD--YFD 133 (220)
T ss_pred hccccchhHHHHHHHHHHHHHHHHHhhc---cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcc--ccc
Confidence 111111111 1111222222222221 24789999999999999999999999999999999999999999 999
Q ss_pred EeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhh-hcCCcccCCH
Q 039449 161 FGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWR-KSGAIVLPDL 239 (253)
Q Consensus 161 ~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~-~~~~~~i~~l 239 (253)
.++........||+|..+..+++.++ +++++++||||+. +|+.+|+++|+++|.+.+ +....+... ..+++++.++
T Consensus 134 ~i~g~~~~~~~KP~P~~l~~~~~~~~-~~~~~~l~VGDs~-~Di~aA~~Ag~~~v~v~~-g~~~~~~l~~~~~d~vi~~~ 210 (220)
T COG0546 134 VIVGGDDVPPPKPDPEPLLLLLEKLG-LDPEEALMVGDSL-NDILAAKAAGVPAVGVTW-GYNSREELAQAGADVVIDSL 210 (220)
T ss_pred eEEcCCCCCCCCcCHHHHHHHHHHhC-CChhheEEECCCH-HHHHHHHHcCCCEEEEEC-CCCCCcchhhcCCCEEECCH
Confidence 98887778888999999999999999 8888999999999 899999999999999994 433333333 3466999999
Q ss_pred HHHHHHHhh
Q 039449 240 VAVKEFLTS 248 (253)
Q Consensus 240 ~el~~~l~~ 248 (253)
.||...+.+
T Consensus 211 ~el~~~l~~ 219 (220)
T COG0546 211 AELLALLAE 219 (220)
T ss_pred HHHHHHHhc
Confidence 999988754
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=207.81 Aligned_cols=213 Identities=20% Similarity=0.258 Sum_probs=161.9
Q ss_pred ceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHHH
Q 039449 7 LRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFVR 86 (253)
Q Consensus 7 ~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (253)
+|+|+||+||||+|+.+.+..++..+++++|.+... .+.... +.|. +.. ..++..+..
T Consensus 1 ~k~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~-~~~~~~-------------~~g~----~~~----~~~~~~~~~ 58 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGLVYRALRQAVTAAGLSPTP-EEVQSA-------------WMGQ----SKI----EAIRALLAL 58 (220)
T ss_pred CcEEEEecCCCeeccCchHHHHHHHHHHHcCCCCCH-HHHHHh-------------hcCC----CHH----HHHHHHHhc
Confidence 589999999999999999999999999999987532 222210 1222 222 224444444
Q ss_pred cCCCC-ChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCC--CCcceeEee
Q 039449 87 AGYDY-DEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVN--QGTEWDFGV 163 (253)
Q Consensus 87 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~--~~~~f~~~~ 163 (253)
.+.+. ..+++...+...+..........++||+.++|++|+++|++++|+||+....++..++.+|+. . +|+.++
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~--~f~~i~ 136 (220)
T TIGR03351 59 DGADEAEAQAAFADFEERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGD--DVDAVV 136 (220)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhc--cCCEEE
Confidence 44321 122333444444443332234589999999999999999999999999999999999999998 6 999999
Q ss_pred eccccCccCCCHHHHHHHHHHhCCCC-CCceEEEcCCcccchhhhhhcCCeE-EEEcCCCCCChhhhhhc-CCcccCCHH
Q 039449 164 FSGLEGVEKPDPRIYEIALERAGNIA-PEEALHIGDSFRKDYVPAKSVGMHA-LLVDRFKTPDAKEWRKS-GAIVLPDLV 240 (253)
Q Consensus 164 ~~~~~~~~kp~~~~~~~~~~~~~~~~-~~~~~~iGD~~~~Di~~a~~~G~~~-i~~~~~~~~~~~~~~~~-~~~~i~~l~ 240 (253)
++++....||+|+++..++++++ ++ +++|++|||++ +|+.+|+++|+.+ +++. ++......+... +++++.++.
T Consensus 137 ~~~~~~~~KP~p~~~~~a~~~~~-~~~~~~~~~igD~~-~Di~aa~~aG~~~~i~~~-~g~~~~~~~~~~~~~~~i~~~~ 213 (220)
T TIGR03351 137 CPSDVAAGRPAPDLILRAMELTG-VQDVQSVAVAGDTP-NDLEAGINAGAGAVVGVL-TGAHDAEELSRHPHTHVLDSVA 213 (220)
T ss_pred cCCcCCCCCCCHHHHHHHHHHcC-CCChhHeEEeCCCH-HHHHHHHHCCCCeEEEEe-cCCCcHHHHhhcCCceeecCHH
Confidence 99888889999999999999999 97 79999999999 8999999999999 8887 454444444333 447899999
Q ss_pred HHHHHH
Q 039449 241 AVKEFL 246 (253)
Q Consensus 241 el~~~l 246 (253)
++..++
T Consensus 214 ~l~~~~ 219 (220)
T TIGR03351 214 DLPALL 219 (220)
T ss_pred HHHHhh
Confidence 998765
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-32 Score=207.01 Aligned_cols=214 Identities=19% Similarity=0.214 Sum_probs=159.5
Q ss_pred CceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHH
Q 039449 6 RLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFV 85 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (253)
++|+|+||+||||+|+...+..++..+++++|.+....+.+...++...... +.....
T Consensus 11 ~~k~viFD~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~----------------------~~~~~~ 68 (229)
T PRK13226 11 FPRAVLFDLDGTLLDSAPDMLATVNAMLAARGRAPITLAQLRPVVSKGARAM----------------------LAVAFP 68 (229)
T ss_pred cCCEEEEcCcCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhhhHHHHH----------------------HHHHhc
Confidence 4699999999999999999999999999999987655444443222221111 111111
Q ss_pred HcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeec
Q 039449 86 RAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFS 165 (253)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~ 165 (253)
... ....+++...+...+..... ....++||+.++|++|+++|++++++||+....+...++.+|+.. +|+.++.+
T Consensus 69 ~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~--~f~~i~~~ 144 (229)
T PRK13226 69 ELD-AAARDALIPEFLQRYEALIG-TQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQ--RCAVLIGG 144 (229)
T ss_pred cCC-hHHHHHHHHHHHHHHHHhhh-hcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchh--cccEEEec
Confidence 000 00112223333333333221 124789999999999999999999999999988888999999988 88887777
Q ss_pred cccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCC-Ch-hhhhhcCCcccCCHHHHH
Q 039449 166 GLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTP-DA-KEWRKSGAIVLPDLVAVK 243 (253)
Q Consensus 166 ~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~-~~-~~~~~~~~~~i~~l~el~ 243 (253)
...+..||+|+++..+++++| +++++|++|||+. +|+.+|+++|+++|++.+ +.. .. ......+++++.++.||.
T Consensus 145 ~~~~~~KP~p~~~~~~~~~l~-~~p~~~l~IGDs~-~Di~aA~~aG~~~i~v~~-g~~~~~~~~~~~~~~~~i~~~~el~ 221 (229)
T PRK13226 145 DTLAERKPHPLPLLVAAERIG-VAPTDCVYVGDDE-RDILAARAAGMPSVAALW-GYRLHDDDPLAWQADVLVEQPQLLW 221 (229)
T ss_pred CcCCCCCCCHHHHHHHHHHhC-CChhhEEEeCCCH-HHHHHHHHCCCcEEEEee-cCCCCCcChhhcCCCeeeCCHHHHH
Confidence 777888999999999999999 9999999999999 999999999999999984 332 22 222334679999999999
Q ss_pred HHHhh
Q 039449 244 EFLTS 248 (253)
Q Consensus 244 ~~l~~ 248 (253)
+.+..
T Consensus 222 ~~~~~ 226 (229)
T PRK13226 222 NPATW 226 (229)
T ss_pred HHhcC
Confidence 88764
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-32 Score=201.71 Aligned_cols=203 Identities=46% Similarity=0.824 Sum_probs=163.4
Q ss_pred eEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHHHc
Q 039449 8 RCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFVRA 87 (253)
Q Consensus 8 k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (253)
|+|+||+||||+|+...+..++..+++++|++.. ..+....+...+......++.++...+++..++|..++...+...
T Consensus 1 k~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 79 (203)
T TIGR02252 1 KLITFDAVGTLLALKEPVGEVYCEIARKYGVEVS-PDELEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDTFGRA 79 (203)
T ss_pred CeEEEecCCceeeeCCCHHHHHHHHHHHhCCCCC-HHHHHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHHHHhc
Confidence 5899999999999999999999999999998753 333444555555555555555554435677778888888877776
Q ss_pred CCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccc
Q 039449 88 GYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGL 167 (253)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~ 167 (253)
+.. +.+.+...+..++........+.++||+.++|++|+++|++++|+||+... ....++.+|+.. +|+.++.++.
T Consensus 80 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~--~fd~i~~s~~ 155 (203)
T TIGR02252 80 GVP-DPESFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLE--YFDFVVTSYE 155 (203)
T ss_pred CCC-CchhHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHH--hcceEEeecc
Confidence 642 344555566665555443344578999999999999999999999998765 467889999988 9999999999
Q ss_pred cCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEE
Q 039449 168 EGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALL 216 (253)
Q Consensus 168 ~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~ 216 (253)
.+..||+|+.|..++++++ ++++++++|||++.+|+.+|+++|+++||
T Consensus 156 ~~~~KP~~~~~~~~~~~~~-~~~~~~~~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 156 VGAEKPDPKIFQEALERAG-ISPEEALHIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred cCCCCCCHHHHHHHHHHcC-CChhHEEEECCCchHHHHHHHHcCCeeeC
Confidence 9999999999999999999 99999999999974699999999999985
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-32 Score=205.94 Aligned_cols=216 Identities=15% Similarity=0.214 Sum_probs=158.3
Q ss_pred CccccCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHH
Q 039449 1 MALLSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCV 80 (253)
Q Consensus 1 m~~~~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (253)
|.+..++++|+||+||||+|+.+.+..++..+++++|.+......+... .|. ..... +
T Consensus 1 ~~~~~~~k~iiFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~--------------~g~----~~~~~----~ 58 (222)
T PRK10826 1 MSTPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRREELPDT--------------LGL----RIDQV----V 58 (222)
T ss_pred CCCcccCcEEEEcCCCCCCcCHHHHHHHHHHHHHHCCCCCCHHHHHHHh--------------hCC----CHHHH----H
Confidence 4334469999999999999999999999999999999864332222211 111 11111 1
Q ss_pred HHHHHHcCC-CCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcce
Q 039449 81 RDSFVRAGY-DYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEW 159 (253)
Q Consensus 81 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f 159 (253)
....+..+. ....+.....+...+..... ....++||+.++|+.|+++|++++|+||+....++..++.+|+.. +|
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~--~f 135 (222)
T PRK10826 59 DLWYARQPWNGPSRQEVVQRIIARVISLIE-ETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRD--YF 135 (222)
T ss_pred HHHHHhcCCCCCCHHHHHHHHHHHHHHHHh-cCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchh--cc
Confidence 111222221 11222222222222222211 235889999999999999999999999999999999999999999 99
Q ss_pred eEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCH
Q 039449 160 DFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDL 239 (253)
Q Consensus 160 ~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l 239 (253)
+.++.++..+..||+|+.+..+++++| +++++|++|||+. +|+.+|+++|+++|++++...... .....+++++.|+
T Consensus 136 ~~~~~~~~~~~~Kp~~~~~~~~~~~~~-~~~~~~~~igDs~-~Di~aA~~aG~~~i~v~~~~~~~~-~~~~~~~~~~~~~ 212 (222)
T PRK10826 136 DALASAEKLPYSKPHPEVYLNCAAKLG-VDPLTCVALEDSF-NGMIAAKAARMRSIVVPAPEQQND-PRWALADVKLESL 212 (222)
T ss_pred cEEEEcccCCCCCCCHHHHHHHHHHcC-CCHHHeEEEcCCh-hhHHHHHHcCCEEEEecCCccCch-hhhhhhheeccCH
Confidence 999999888889999999999999999 9999999999999 899999999999999985433322 2233466899999
Q ss_pred HHHHH
Q 039449 240 VAVKE 244 (253)
Q Consensus 240 ~el~~ 244 (253)
.+|..
T Consensus 213 ~dl~~ 217 (222)
T PRK10826 213 TELTA 217 (222)
T ss_pred HHHhh
Confidence 99854
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-32 Score=204.72 Aligned_cols=222 Identities=24% Similarity=0.327 Sum_probs=165.4
Q ss_pred CccccCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHH
Q 039449 1 MALLSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCV 80 (253)
Q Consensus 1 m~~~~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (253)
|.. +++++|+||+||||+++.+.+..++..+++++|.+......+... .|.. .. .++
T Consensus 1 ~~~-~~~~~iiFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~g~~----~~----~~~ 57 (226)
T PRK13222 1 MKF-MDIRAVAFDLDGTLVDSAPDLAAAVNAALAALGLPPAGEERVRTW--------------VGNG----AD----VLV 57 (226)
T ss_pred CCC-CcCcEEEEcCCcccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHH--------------hCcc----HH----HHH
Confidence 443 458999999999999998888889999999999876554443321 1111 11 122
Q ss_pred HHHHHHcCCCCChHHHHH---HHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCc
Q 039449 81 RDSFVRAGYDYDEDTFEK---IFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGT 157 (253)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~ 157 (253)
...+...+...+.+.... .+...+..... ....++||+.++++.|++.|++++++||+....++.+++.+|+..
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-- 134 (226)
T PRK13222 58 ERALTWAGREPDEELLEKLRELFDRHYAENVA-GGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIAD-- 134 (226)
T ss_pred HHHHhhccCCccHHHHHHHHHHHHHHHHHhcc-ccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCcc--
Confidence 333333333333333333 33333333221 235789999999999999999999999999999999999999988
Q ss_pred ceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccC
Q 039449 158 EWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLP 237 (253)
Q Consensus 158 ~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~ 237 (253)
+|+.++.++..+..||+|+++..++++++ ++++++++|||+. +|+.+|+++|+++|++.+...+..+.....++++++
T Consensus 135 ~f~~~~~~~~~~~~kp~~~~~~~~~~~~~-~~~~~~i~igD~~-~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~ 212 (226)
T PRK13222 135 YFSVVIGGDSLPNKKPDPAPLLLACEKLG-LDPEEMLFVGDSR-NDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVID 212 (226)
T ss_pred CccEEEcCCCCCCCCcChHHHHHHHHHcC-CChhheEEECCCH-HHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEEC
Confidence 88888888888888999999999999999 9999999999999 899999999999999994222222222234568999
Q ss_pred CHHHHHHHHhhhh
Q 039449 238 DLVAVKEFLTSEI 250 (253)
Q Consensus 238 ~l~el~~~l~~~~ 250 (253)
|+.+|..++.+.+
T Consensus 213 ~~~~l~~~l~~~~ 225 (226)
T PRK13222 213 HFAELLPLLGLAL 225 (226)
T ss_pred CHHHHHHHHHHhc
Confidence 9999999987754
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-32 Score=207.62 Aligned_cols=222 Identities=13% Similarity=0.192 Sum_probs=156.7
Q ss_pred CceEEEEecCCceeccCCC-HHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHH
Q 039449 6 RLRCITVDVTGTLLAYKGE-LGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSF 84 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (253)
++++|+||+||||+|+... +..++..+++++|.+. +.+.+...+.......... .+ +. ........
T Consensus 1 ~~k~viFD~DGTLiDs~~~~~~~a~~~~~~~~g~~~-~~~~~~~~~G~~~~~~~~~---~~-----~~----~~~~~~~~ 67 (253)
T TIGR01422 1 KIEAVIFDWAGTTVDFGSFAPTQAFVEAFAEFGVQI-TLEEARGPMGLGKWDHIRA---LL-----KM----PAVAERWR 67 (253)
T ss_pred CceEEEEeCCCCeecCCCccHHHHHHHHHHHcCCCc-cHHHHHHhcCccHHHHHHH---Hh-----cC----HHHHHHHH
Confidence 3789999999999998653 5778999999999753 3333322111110000000 00 00 01122233
Q ss_pred HHcCCCCChHHHHHHH---HHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcce-e
Q 039449 85 VRAGYDYDEDTFEKIF---RRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEW-D 160 (253)
Q Consensus 85 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f-~ 160 (253)
+.++...+.+.+...+ ...+.... .....++||+.++|+.|+++|++++|+||+....++.+++.+|+.. +| +
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~--~f~d 144 (253)
T TIGR01422 68 AKFGRLPTEADIEAIYEAFEPLQLAKL-AEYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQG--YRPD 144 (253)
T ss_pred HHhCCCCCHHHHHHHHHHHHHHHHHHH-HhcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcC--CCCc
Confidence 4445443444433333 32222222 1235889999999999999999999999999999999999999988 75 7
Q ss_pred EeeeccccCccCCCHHHHHHHHHHhCCCC-CCceEEEcCCcccchhhhhhcCCeEEEEcCCCCC----C-----------
Q 039449 161 FGVFSGLEGVEKPDPRIYEIALERAGNIA-PEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTP----D----------- 224 (253)
Q Consensus 161 ~~~~~~~~~~~kp~~~~~~~~~~~~~~~~-~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~----~----------- 224 (253)
.+++++..+..||+|+.|..++++++ +. +++|++|||++ +|+.+|+++|+.+|++.+ +.. +
T Consensus 145 ~ii~~~~~~~~KP~p~~~~~a~~~l~-~~~~~~~l~IGDs~-~Di~aA~~aGi~~i~v~~-g~~~~~~~~~~~~~~~~~~ 221 (253)
T TIGR01422 145 YNVTTDDVPAGRPAPWMALKNAIELG-VYDVAACVKVGDTV-PDIEEGRNAGMWTVGLIL-SSNELGLSEEEYRALDPAE 221 (253)
T ss_pred eEEccccCCCCCCCHHHHHHHHHHcC-CCCchheEEECCcH-HHHHHHHHCCCeEEEEec-CCcccCCCHHHHHhCCHHH
Confidence 88888888889999999999999999 95 99999999999 999999999999999983 432 1
Q ss_pred --------hhhhhhc-CCcccCCHHHHHHHH
Q 039449 225 --------AKEWRKS-GAIVLPDLVAVKEFL 246 (253)
Q Consensus 225 --------~~~~~~~-~~~~i~~l~el~~~l 246 (253)
...+... ++++++++.|+.+++
T Consensus 222 ~~~~~~~~~~~l~~~~~~~v~~~~~el~~~~ 252 (253)
T TIGR01422 222 LEARRAEATARLKAAGAHYVIDTLAELPAVI 252 (253)
T ss_pred HHHHHHHHHHHHHhcCCCEehhcHHHHHHhh
Confidence 2344443 458999999998765
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-32 Score=203.31 Aligned_cols=209 Identities=24% Similarity=0.338 Sum_probs=156.5
Q ss_pred EEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHHHcCC
Q 039449 10 ITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFVRAGY 89 (253)
Q Consensus 10 i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (253)
|+||+||||+|+...+..++..+++++|.+....+.+... .|.. .. ..+...+...+.
T Consensus 1 viFD~DGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~g~~----~~----~~~~~~~~~~~~ 58 (213)
T TIGR01449 1 VLFDLDGTLVDSAPDIAAAVNMALAALGLPPATLARVIGF--------------IGNG----VP----VLMERVLAWAGQ 58 (213)
T ss_pred CeecCCCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHH--------------hccc----HH----HHHHHHhhcccc
Confidence 6899999999999888889999999999865444433221 1111 11 112333333343
Q ss_pred CCChHHH---HHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeecc
Q 039449 90 DYDEDTF---EKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSG 166 (253)
Q Consensus 90 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~ 166 (253)
..+.+.. ...+...+..... ....++||+.++|+.|+++|++++|+||+....++..++.+|+.. +|+.++.++
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~--~f~~~~~~~ 135 (213)
T TIGR01449 59 EPDAQRVAELRKLFDRHYEEVAG-ELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAK--YFSVLIGGD 135 (213)
T ss_pred ccChHHHHHHHHHHHHHHHHhcc-ccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHh--hCcEEEecC
Confidence 3333222 2333333333221 235789999999999999999999999999999999999999988 899988888
Q ss_pred ccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhh-hcCCcccCCHHHHHHH
Q 039449 167 LEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWR-KSGAIVLPDLVAVKEF 245 (253)
Q Consensus 167 ~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~-~~~~~~i~~l~el~~~ 245 (253)
..+..||+|+.+..++++++ ++++++++|||+. +|+.+|+++|++++++.+ +......+. ..++++++++.+|..+
T Consensus 136 ~~~~~Kp~p~~~~~~~~~~~-~~~~~~~~igDs~-~d~~aa~~aG~~~i~v~~-g~~~~~~l~~~~a~~~i~~~~~l~~~ 212 (213)
T TIGR01449 136 SLAQRKPHPDPLLLAAERLG-VAPQQMVYVGDSR-VDIQAARAAGCPSVLLTY-GYRYGEAIDLLPPDVLYDSLNELPPL 212 (213)
T ss_pred CCCCCCCChHHHHHHHHHcC-CChhHeEEeCCCH-HHHHHHHHCCCeEEEEcc-CCCCCcchhhcCCCeEeCCHHHHHhh
Confidence 88888999999999999999 9999999999999 999999999999999983 333222332 3456899999998765
Q ss_pred H
Q 039449 246 L 246 (253)
Q Consensus 246 l 246 (253)
|
T Consensus 213 ~ 213 (213)
T TIGR01449 213 L 213 (213)
T ss_pred C
Confidence 3
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-32 Score=208.04 Aligned_cols=222 Identities=12% Similarity=0.134 Sum_probs=158.0
Q ss_pred ccCceEEEEecCCceeccCCC-HHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHH---
Q 039449 4 LSRLRCITVDVTGTLLAYKGE-LGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTC--- 79 (253)
Q Consensus 4 ~~~~k~i~fD~DGTL~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 79 (253)
|+++|+|+||+||||+|+... +..++..+++++|.+. ..+..... +|.. ....++.+
T Consensus 1 ~~~~k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~g~~~-~~~~~~~~--------------~G~~----~~~~~~~~~~~ 61 (267)
T PRK13478 1 MMKIQAVIFDWAGTTVDFGSFAPTQAFVEAFAQFGVEI-TLEEARGP--------------MGLG----KWDHIRALLKM 61 (267)
T ss_pred CCceEEEEEcCCCCeecCCCccHHHHHHHHHHHcCCCC-CHHHHHHh--------------cCCC----HHHHHHHHHhc
Confidence 456899999999999998654 3678999999999753 33322211 1211 11111111
Q ss_pred ---HHHHHHHcCCCCChHHHHHHHH---HHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCC
Q 039449 80 ---VRDSFVRAGYDYDEDTFEKIFR---RIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGV 153 (253)
Q Consensus 80 ---~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl 153 (253)
.......++...+.+.....+. ..+.... .....++||+.++|+.|+++|++++|+||.....+...++.+++
T Consensus 62 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l 140 (267)
T PRK13478 62 PRVAARWQAVFGRLPTEADVDALYAAFEPLQIAKL-ADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAA 140 (267)
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH-hhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhh
Confidence 1112233444333343333332 2222222 12347899999999999999999999999999999999999988
Q ss_pred CCCcc-eeEeeeccccCccCCCHHHHHHHHHHhCCCC-CCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCC-------
Q 039449 154 NQGTE-WDFGVFSGLEGVEKPDPRIYEIALERAGNIA-PEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPD------- 224 (253)
Q Consensus 154 ~~~~~-f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~-~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~------- 224 (253)
.. + |+.++++++.+..||+|+.|..++++++ +. +++|++|||++ +|+.+|+++|+++|++.+ +...
T Consensus 141 ~~--~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~-~~~~~e~l~IGDs~-~Di~aA~~aG~~~i~v~~-g~~~~~~~~~~ 215 (267)
T PRK13478 141 QG--YRPDHVVTTDDVPAGRPYPWMALKNAIELG-VYDVAACVKVDDTV-PGIEEGLNAGMWTVGVIL-SGNELGLSEEE 215 (267)
T ss_pred cC--CCceEEEcCCcCCCCCCChHHHHHHHHHcC-CCCCcceEEEcCcH-HHHHHHHHCCCEEEEEcc-CcccccCCHHH
Confidence 77 5 4777788888888999999999999999 96 69999999999 999999999999999984 3321
Q ss_pred ----------------hhhhhhc-CCcccCCHHHHHHHHhhhh
Q 039449 225 ----------------AKEWRKS-GAIVLPDLVAVKEFLTSEI 250 (253)
Q Consensus 225 ----------------~~~~~~~-~~~~i~~l~el~~~l~~~~ 250 (253)
.+.+... .+++++|+.+|.+++....
T Consensus 216 ~~~~~~~~~~~~~~~~~~~l~~~~a~~vi~~~~~l~~~l~~~~ 258 (267)
T PRK13478 216 YQALSAAELAARRERARARLRAAGAHYVIDTIADLPAVIADIE 258 (267)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHcCCCeehhhHHHHHHHHHHHH
Confidence 2344343 4589999999998886543
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-31 Score=205.15 Aligned_cols=209 Identities=16% Similarity=0.185 Sum_probs=153.7
Q ss_pred ccCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCC---CCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHH
Q 039449 4 LSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPC---PDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCV 80 (253)
Q Consensus 4 ~~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (253)
+.++++|+||+||||+|+...+..++..+++++|... ...+..... ..|. +..+.+.
T Consensus 19 ~~~~k~viFDlDGTLiDs~~~~~~a~~~~~~~~g~~~g~~~~~~~~~~~-------------~~G~----~~~~~~~--- 78 (248)
T PLN02770 19 LAPLEAVLFDVDGTLCDSDPLHYYAFREMLQEINFNGGVPITEEFFVEN-------------IAGK----HNEDIAL--- 78 (248)
T ss_pred cCccCEEEEcCCCccCcCHHHHHHHHHHHHHHhccccCCCCCHHHHHHH-------------cCCC----CHHHHHH---
Confidence 4568999999999999999999999999999997541 122211110 1222 1122211
Q ss_pred HHHHHHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCccee
Q 039449 81 RDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWD 160 (253)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~ 160 (253)
..+.. ... ...++...+...+..... ....++||+.++|++|+++|++++|+||+....++..++.+|+.. +|+
T Consensus 79 -~~~~~-~~~-~~~~~~~~~~~~y~~~~~-~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~--~Fd 152 (248)
T PLN02770 79 -GLFPD-DLE-RGLKFTDDKEALFRKLAS-EQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSD--FFQ 152 (248)
T ss_pred -HHcCc-chh-hHHHHHHHHHHHHHHHHH-hcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChh--hCc
Confidence 11110 000 011112222333333221 235789999999999999999999999999999999999999998 999
Q ss_pred EeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhh-hcCCcccCCH
Q 039449 161 FGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWR-KSGAIVLPDL 239 (253)
Q Consensus 161 ~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~-~~~~~~i~~l 239 (253)
.++++++.+..||+|+.|..++++++ +++++|++|||+. +|+++|+++|+++|++.+ +.+ ...+. ..+++++.++
T Consensus 153 ~iv~~~~~~~~KP~p~~~~~a~~~~~-~~~~~~l~vgDs~-~Di~aA~~aGi~~i~v~~-g~~-~~~l~~~~a~~vi~~~ 228 (248)
T PLN02770 153 AVIIGSECEHAKPHPDPYLKALEVLK-VSKDHTFVFEDSV-SGIKAGVAAGMPVVGLTT-RNP-ESLLMEAKPTFLIKDY 228 (248)
T ss_pred EEEecCcCCCCCCChHHHHHHHHHhC-CChhHEEEEcCCH-HHHHHHHHCCCEEEEEeC-CCC-HHHHhhcCCCEEeccc
Confidence 99999999999999999999999999 9999999999999 899999999999999984 433 23332 3456899999
Q ss_pred HHH
Q 039449 240 VAV 242 (253)
Q Consensus 240 ~el 242 (253)
.++
T Consensus 229 ~e~ 231 (248)
T PLN02770 229 EDP 231 (248)
T ss_pred hhh
Confidence 983
|
|
| >KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-32 Score=198.90 Aligned_cols=213 Identities=39% Similarity=0.690 Sum_probs=183.3
Q ss_pred CccccCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCC-CChHHHHHHH
Q 039449 1 MALLSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAK-MPNIVWWKTC 79 (253)
Q Consensus 1 m~~~~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 79 (253)
|+..+++++|+||++|||+...+.....+..+.+.+|++... ..+.+.+...++++....+..+.... ++..+||..+
T Consensus 1 ~~~~~~iravtfD~~~tLl~~~~~~~~~y~~i~~~~gl~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~~ww~~l 79 (237)
T KOG3085|consen 1 MAELMRIRAVTFDAGGTLLATLPPVMEVYCEIAEAYGLEYDD-SLIETIFRKDFKKMSEKGPFFGLYSGELTLSQWWPKL 79 (237)
T ss_pred CCcccceEEEEEeCCCceeecCCccHHHHHHHHHHhCCCCCH-HHHhHhhhHHHHhhcccCCcccccCCcccHHHHHHHH
Confidence 677789999999999999999999999999999999998655 78888899999988888888888766 8999999999
Q ss_pred HHHHHHHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcce
Q 039449 80 VRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEW 159 (253)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f 159 (253)
+...+...+.+...+.........+.... ...+...+++.++++.|++.|..++++||.+.... ..+..+|+.. +|
T Consensus 80 v~~~f~~~~~~~~~~~~~~~~~~~~s~~~-~~~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~~-~~l~~~~l~~--~f 155 (237)
T KOG3085|consen 80 VESTFGKAGIDYEEELLENFSFRLFSTFA-PSAWKYLDGMQELLQKLRKKGTILGIISNFDDRLR-LLLLPLGLSA--YF 155 (237)
T ss_pred HHHHhccccchhHHHHHhhhhhheecccc-ccCceeccHHHHHHHHHHhCCeEEEEecCCcHHHH-HHhhccCHHH--hh
Confidence 98888776654333333233334444332 23567788999999999999999999999998766 6888999987 99
Q ss_pred eEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcC
Q 039449 160 DFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDR 219 (253)
Q Consensus 160 ~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~ 219 (253)
+.++.|.+.+..||+|+.|+.++++++ ++|++|+||||+..||+++|+++|+.++++.+
T Consensus 156 D~vv~S~e~g~~KPDp~If~~al~~l~-v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~ 214 (237)
T KOG3085|consen 156 DFVVESCEVGLEKPDPRIFQLALERLG-VKPEECVHIGDLLENDYEGARNLGWHAILVDN 214 (237)
T ss_pred hhhhhhhhhccCCCChHHHHHHHHHhC-CChHHeEEecCccccccHhHHHcCCEEEEEcc
Confidence 999999999999999999999999999 99999999999999999999999999999984
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-32 Score=206.15 Aligned_cols=212 Identities=17% Similarity=0.212 Sum_probs=157.9
Q ss_pred CceEEEEecCCceeccCC-CHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHH
Q 039449 6 RLRCITVDVTGTLLAYKG-ELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSF 84 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (253)
.+|+|+||+||||+|+.. .+..++..+++++|+.....+.... ..|.. .... +...+
T Consensus 23 ~~k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~G~~~~~~e~~~~--------------~~G~~----~~~~----~~~l~ 80 (260)
T PLN03243 23 GWLGVVLEWEGVIVEDDSELERKAWRALAEEEGKRPPPAFLLKR--------------AEGMK----NEQA----ISEVL 80 (260)
T ss_pred CceEEEEeCCCceeCCchHHHHHHHHHHHHHcCCCCCHHHHHHH--------------hcCCC----HHHH----HHHHh
Confidence 489999999999999964 5667999999999987543222111 12322 1222 22222
Q ss_pred HHcCCCCCh---HHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeE
Q 039449 85 VRAGYDYDE---DTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDF 161 (253)
Q Consensus 85 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~ 161 (253)
.. ..+. +.+...+...+.... .....++||+.++|++|+++|++++|+||+....++..++.+|+.. +|+.
T Consensus 81 ~~---~~~~~~~~~l~~~~~~~~~~~~-~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~--~Fd~ 154 (260)
T PLN03243 81 CW---SRDFLQMKRLAIRKEDLYEYMQ-GGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEG--FFSV 154 (260)
T ss_pred cc---CCCHHHHHHHHHHHHHHHHHHH-ccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHh--hCcE
Confidence 11 1112 222333333332221 2235789999999999999999999999999999999999999998 9999
Q ss_pred eeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHH
Q 039449 162 GVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVA 241 (253)
Q Consensus 162 ~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~e 241 (253)
++++++....||+|+.|..++++++ +++++|++|||+. +|+.+|+++|+.+|++.++. ....+. .+++++.++++
T Consensus 155 ii~~~d~~~~KP~Pe~~~~a~~~l~-~~p~~~l~IgDs~-~Di~aA~~aG~~~i~v~g~~--~~~~l~-~ad~vi~~~~e 229 (260)
T PLN03243 155 VLAAEDVYRGKPDPEMFMYAAERLG-FIPERCIVFGNSN-SSVEAAHDGCMKCVAVAGKH--PVYELS-AGDLVVRRLDD 229 (260)
T ss_pred EEecccCCCCCCCHHHHHHHHHHhC-CChHHeEEEcCCH-HHHHHHHHcCCEEEEEecCC--chhhhc-cCCEEeCCHHH
Confidence 9999998889999999999999999 9999999999999 89999999999999997322 233333 35689999999
Q ss_pred HHHHHhhhh
Q 039449 242 VKEFLTSEI 250 (253)
Q Consensus 242 l~~~l~~~~ 250 (253)
+.......+
T Consensus 230 l~~~~~~~~ 238 (260)
T PLN03243 230 LSVVDLKNL 238 (260)
T ss_pred HHHHHHhhh
Confidence 977665443
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-31 Score=199.09 Aligned_cols=215 Identities=28% Similarity=0.348 Sum_probs=149.7
Q ss_pred ceEEEEecCCceeccCCCHHHHHHHH---HHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHH
Q 039449 7 LRCITVDVTGTLLAYKGELGDYYCMA---AKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDS 83 (253)
Q Consensus 7 ~k~i~fD~DGTL~~~~~~~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (253)
+++|+||+||||+++.+.+..++..+ +...|.+. ..++....+...+........ .....+ +...
T Consensus 2 ~~~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~-------~~~~~~----~~~~ 69 (221)
T TIGR02253 2 IKAIFFDLDDTLIDTSGLAEKARRNAIEVLIEAGLNV-DFEEAYEELLKLIKEYGSNYP-------THFDYL----IRRL 69 (221)
T ss_pred ceEEEEeCCCCCcCCCCccCHHHHHHHHHHHHCCCcC-CHHHHHHHHHHHHHHhccccC-------cchHHH----HHHH
Confidence 78999999999999998877776654 45666653 444444333332222111010 011111 1111
Q ss_pred HHHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEee
Q 039449 84 FVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGV 163 (253)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~ 163 (253)
. .....+........+..... ....++||+.++|++|+++|++++++||+....+...++.+|+.. +|+.++
T Consensus 70 ~----~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~--~f~~i~ 141 (221)
T TIGR02253 70 W----EEYNPKLVAAFVYAYHKLKF--AYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRD--FFDAVI 141 (221)
T ss_pred h----hhcCHHHHHHHHHHHHHHHH--HhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHH--hccEEE
Confidence 1 11122222222222222111 124789999999999999999999999999988999999999998 999999
Q ss_pred eccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChh-hhhhcCCcccCCHHHH
Q 039449 164 FSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAK-EWRKSGAIVLPDLVAV 242 (253)
Q Consensus 164 ~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~-~~~~~~~~~i~~l~el 242 (253)
++++.+..||+|+.|..++++++ ++++++++|||++.+|+.+|+++|+.+|++.+....... .....+++++.++.||
T Consensus 142 ~~~~~~~~KP~~~~~~~~~~~~~-~~~~~~~~igDs~~~di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~el 220 (221)
T TIGR02253 142 TSEEEGVEKPHPKIFYAALKRLG-VKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQGKSSKMEDDVYPYPDYEISSLREL 220 (221)
T ss_pred EeccCCCCCCCHHHHHHHHHHcC-CChhhEEEECCChHHHHHHHHHCCCEEEEECCCCCcccccccccCCCeeeCcHHhh
Confidence 99999999999999999999999 999999999999756999999999999999843322211 1122356789999886
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-30 Score=196.10 Aligned_cols=219 Identities=19% Similarity=0.240 Sum_probs=156.3
Q ss_pred CceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHH--HHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHH
Q 039449 6 RLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHE--GFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDS 83 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (253)
++|+|+||+||||+|.. ...++..+++++|.... .+.... .+....... + ..+.++..+.....+...
T Consensus 2 ~~k~iiFDlDGTLid~~--~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~ 71 (224)
T PRK09449 2 KYDWILFDADETLFHFD--AFAGLQRMFSRYGVDFT-AEDFQDYQAVNKPLWVD---Y----QNGAITALQLQHTRFESW 71 (224)
T ss_pred CccEEEEcCCCchhcch--hhHHHHHHHHHhCCCCc-HHHHHHHHHHHHHHHHH---H----HcCCCCHHHHHHHHHHHH
Confidence 58999999999999843 35678888888887642 222211 111111100 0 011223333333333444
Q ss_pred HHHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEee
Q 039449 84 FVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGV 163 (253)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~ 163 (253)
.+.++. +.+.+...+...+.. ...++||+.++|++|+ +|++++++||+....++..++.+|+.. +|+.++
T Consensus 72 ~~~~~~--~~~~~~~~~~~~~~~-----~~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~--~fd~v~ 141 (224)
T PRK09449 72 AEKLNV--TPGELNSAFLNAMAE-----ICTPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRD--YFDLLV 141 (224)
T ss_pred HHHcCC--CHHHHHHHHHHHHhh-----cCccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHH--HcCEEE
Confidence 555554 334444444333322 1478999999999999 579999999999999999999999998 999999
Q ss_pred eccccCccCCCHHHHHHHHHHhCCCCC-CceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHH
Q 039449 164 FSGLEGVEKPDPRIYEIALERAGNIAP-EEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAV 242 (253)
Q Consensus 164 ~~~~~~~~kp~~~~~~~~~~~~~~~~~-~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el 242 (253)
++++.+..||+|+.|..++++++ +.+ ++|++|||+..+|+.+|+++|+++|++++.+...... ..++++++++.||
T Consensus 142 ~~~~~~~~KP~p~~~~~~~~~~~-~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~--~~~~~~i~~~~el 218 (224)
T PRK09449 142 ISEQVGVAKPDVAIFDYALEQMG-NPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEG--IAPTYQVSSLSEL 218 (224)
T ss_pred EECccCCCCCCHHHHHHHHHHcC-CCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCC--CCCeEEECCHHHH
Confidence 99999999999999999999999 854 7999999998359999999999999998533322221 2356899999999
Q ss_pred HHHHh
Q 039449 243 KEFLT 247 (253)
Q Consensus 243 ~~~l~ 247 (253)
..+++
T Consensus 219 ~~~l~ 223 (224)
T PRK09449 219 EQLLC 223 (224)
T ss_pred HHHHh
Confidence 98775
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-31 Score=197.56 Aligned_cols=202 Identities=21% Similarity=0.285 Sum_probs=153.8
Q ss_pred EEEecCCceeccCCCHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHHHcC
Q 039449 10 ITVDVTGTLLAYKGELGDYYCMAAKSV-GLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFVRAG 88 (253)
Q Consensus 10 i~fD~DGTL~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (253)
|+||+||||+|+...+.+++..+++++ |.+....+.+... .|.. ....++..+
T Consensus 1 iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~g~~------------~~~~~~~~~ 54 (205)
T TIGR01454 1 VVFDLDGVLVDSFAVMREAFAIAYREVVGDGPAPFEEYRRH--------------LGRY------------FPDIMRIMG 54 (205)
T ss_pred CeecCcCccccCHHHHHHHHHHHHHHhcCCCCCCHHHHHHH--------------hCcc------------HHHHHHHcC
Confidence 689999999999999999999999884 7654443333221 1111 222233333
Q ss_pred CCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeecccc
Q 039449 89 YDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLE 168 (253)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~ 168 (253)
.+. ..........+. . .....++||+.++|++|+++|++++++||+....++..++.+|+.. +|+.++.+++.
T Consensus 55 ~~~--~~~~~~~~~~~~-~--~~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~--~f~~i~~~~~~ 127 (205)
T TIGR01454 55 LPL--EMEEPFVRESYR-L--AGEVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLP--LFDHVIGSDEV 127 (205)
T ss_pred CCH--HHHHHHHHHHHH-h--hcccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChh--heeeEEecCcC
Confidence 321 111111222222 1 1235889999999999999999999999999999999999999998 99998888888
Q ss_pred CccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhh-hcCCcccCCHHHHHHHHh
Q 039449 169 GVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWR-KSGAIVLPDLVAVKEFLT 247 (253)
Q Consensus 169 ~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~-~~~~~~i~~l~el~~~l~ 247 (253)
+..||+++.+..++++++ ++++++++|||+. +|+.+|+++|+++|++. ++....+.+. ..+++++.++.+|..+++
T Consensus 128 ~~~KP~~~~~~~~~~~~~-~~~~~~l~igD~~-~Di~aA~~~Gi~~i~~~-~g~~~~~~l~~~~~~~~~~~~~~l~~~~~ 204 (205)
T TIGR01454 128 PRPKPAPDIVREALRLLD-VPPEDAVMVGDAV-TDLASARAAGTATVAAL-WGEGDAGELLAARPDFLLRKPQSLLALCR 204 (205)
T ss_pred CCCCCChHHHHHHHHHcC-CChhheEEEcCCH-HHHHHHHHcCCeEEEEE-ecCCChhhhhhcCCCeeeCCHHHHHHHhh
Confidence 888999999999999999 9999999999999 89999999999999998 4544444443 345589999999988765
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.7e-31 Score=198.10 Aligned_cols=223 Identities=19% Similarity=0.256 Sum_probs=163.3
Q ss_pred ceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHHH
Q 039449 7 LRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFVR 86 (253)
Q Consensus 7 ~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (253)
+|+|+||+||||+|+......++..++++.|.+... .. ...+..........+. .+..+...+....+...+..
T Consensus 1 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~-~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 74 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQAAEALALRLLFEDQGIPLTE-DM-FAQYKEINQGLWRAYE----EGKITKDEVVNTRFSALLKE 74 (224)
T ss_pred CCEEEEcCcCcccccchHHHHHHHHHHHHhCCCccH-HH-HHHHHHHhHHHHHHHH----cCCCCHHHHHHHHHHHHHHH
Confidence 589999999999999998888899999999976431 11 1111110011111110 11233444444445556666
Q ss_pred cCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeecc
Q 039449 87 AGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSG 166 (253)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~ 166 (253)
.+.+...+.+...+...+.. ...++||+.++|++|++. ++++++||+....+...++.+|+.. +|+.++.++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~--~fd~i~~~~ 146 (224)
T TIGR02254 75 YNTEADEALLNQKYLRFLEE-----GHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFP--FFDDIFVSE 146 (224)
T ss_pred hCCCCcHHHHHHHHHHHHhc-----cCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHh--hcCEEEEcC
Confidence 66544333343334333321 247899999999999999 9999999999999999999999998 999999999
Q ss_pred ccCccCCCHHHHHHHHHHh-CCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHHHHH
Q 039449 167 LEGVEKPDPRIYEIALERA-GNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKEF 245 (253)
Q Consensus 167 ~~~~~kp~~~~~~~~~~~~-~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~~~ 245 (253)
..+..||+|++|..+++++ + ++++++++|||+..+|+.+|+++|+++|++++.+..... ...+.+++.++.||.++
T Consensus 147 ~~~~~KP~~~~~~~~~~~~~~-~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~--~~~~~~~~~~~~el~~~ 223 (224)
T TIGR02254 147 DAGIQKPDKEIFNYALERMPK-FSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPD--DIIPTYEIRSLEELYEI 223 (224)
T ss_pred ccCCCCCCHHHHHHHHHHhcC-CCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCC--CCCCceEECCHHHHHhh
Confidence 9999999999999999999 9 999999999999735999999999999999853333221 23345899999999876
Q ss_pred H
Q 039449 246 L 246 (253)
Q Consensus 246 l 246 (253)
|
T Consensus 224 ~ 224 (224)
T TIGR02254 224 L 224 (224)
T ss_pred C
Confidence 4
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.1e-31 Score=198.74 Aligned_cols=201 Identities=18% Similarity=0.232 Sum_probs=146.1
Q ss_pred CceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHH
Q 039449 6 RLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFV 85 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (253)
++|+|+||+||||+|+...+..++..+++++|.+. ...... ..|.. .... ++...
T Consensus 2 ~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~---~~~~~~-------------~~g~~----~~~~----~~~~~- 56 (218)
T PRK11587 2 RCKGFLFDLDGTLVDSLPAVERAWSNWADRHGIAP---DEVLNF-------------IHGKQ----AITS----LRHFM- 56 (218)
T ss_pred CCCEEEEcCCCCcCcCHHHHHHHHHHHHHHcCCCH---HHHHHH-------------HcCCC----HHHH----HHHHh-
Confidence 58999999999999999999999999999999753 111110 01221 1111 11111
Q ss_pred HcCCCCChHHHHHHHHHH--HHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEee
Q 039449 86 RAGYDYDEDTFEKIFRRI--YASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGV 163 (253)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~ 163 (253)
...+.+.+...+... +.... .....++||+.++|+.|+++|++++++||+........++..++. +|+.++
T Consensus 57 ---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~---~~~~i~ 129 (218)
T PRK11587 57 ---AGASEAEIQAEFTRLEQIEATD-TEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLP---APEVFV 129 (218)
T ss_pred ---ccCCcHHHHHHHHHHHHHHHhh-hcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCC---CccEEE
Confidence 111223333333321 11111 234588999999999999999999999999888777788888884 466667
Q ss_pred eccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHHH
Q 039449 164 FSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVK 243 (253)
Q Consensus 164 ~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~ 243 (253)
.++.....||+|+.+..+++++| ++|++|++|||+. +|+.+|+++|+++|++.+ +... .. ...++++++++.||.
T Consensus 130 ~~~~~~~~KP~p~~~~~~~~~~g-~~p~~~l~igDs~-~di~aA~~aG~~~i~v~~-~~~~-~~-~~~~~~~~~~~~el~ 204 (218)
T PRK11587 130 TAERVKRGKPEPDAYLLGAQLLG-LAPQECVVVEDAP-AGVLSGLAAGCHVIAVNA-PADT-PR-LDEVDLVLHSLEQLT 204 (218)
T ss_pred EHHHhcCCCCCcHHHHHHHHHcC-CCcccEEEEecch-hhhHHHHHCCCEEEEECC-CCch-hh-hccCCEEecchhhee
Confidence 77777788999999999999999 9999999999999 899999999999999984 3222 22 223568999999874
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-30 Score=200.56 Aligned_cols=210 Identities=19% Similarity=0.227 Sum_probs=158.4
Q ss_pred CceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHH
Q 039449 6 RLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFV 85 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (253)
.+++|+||+||||+|+.+.+..++..+++++|......+..... .|. + ....++
T Consensus 61 ~~k~vIFDlDGTLiDS~~~~~~a~~~~~~~~G~~~~~~~~~~~~--------------~g~----~--------~~~i~~ 114 (273)
T PRK13225 61 TLQAIIFDFDGTLVDSLPTVVAIANAHAPDFGYDPIDERDYAQL--------------RQW----S--------SRTIVR 114 (273)
T ss_pred hcCEEEECCcCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHH--------------hCc----c--------HHHHHH
Confidence 58999999999999999999999999999999875544332221 111 1 112223
Q ss_pred HcCCC-CChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeee
Q 039449 86 RAGYD-YDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVF 164 (253)
Q Consensus 86 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~ 164 (253)
..+.+ ...+++...+...+.... ...+++||+.++|++|+++|++++|+||+....++..++.+|+.. +|+.++.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~--~F~~vi~ 190 (273)
T PRK13225 115 RAGLSPWQQARLLQRVQRQLGDCL--PALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRS--LFSVVQA 190 (273)
T ss_pred HcCCCHHHHHHHHHHHHHHHHhhc--ccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh--heEEEEe
Confidence 33322 112233333444443322 235889999999999999999999999999999999999999988 8988665
Q ss_pred ccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhh-hcCCcccCCHHHHH
Q 039449 165 SGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWR-KSGAIVLPDLVAVK 243 (253)
Q Consensus 165 ~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~-~~~~~~i~~l~el~ 243 (253)
+... +++++.+..++++++ +++++|++|||+. +|+.+|+++|+.+|++. ++....+.+. ..++++++++.+|.
T Consensus 191 ~~~~---~~k~~~~~~~l~~~~-~~p~~~l~IGDs~-~Di~aA~~AG~~~I~v~-~g~~~~~~l~~~~ad~~i~~~~eL~ 264 (273)
T PRK13225 191 GTPI---LSKRRALSQLVAREG-WQPAAVMYVGDET-RDVEAARQVGLIAVAVT-WGFNDRQSLVAACPDWLLETPSDLL 264 (273)
T ss_pred cCCC---CCCHHHHHHHHHHhC-cChhHEEEECCCH-HHHHHHHHCCCeEEEEe-cCCCCHHHHHHCCCCEEECCHHHHH
Confidence 5443 356789999999999 9999999999999 89999999999999998 4544444443 34669999999999
Q ss_pred HHHhhhhh
Q 039449 244 EFLTSEIS 251 (253)
Q Consensus 244 ~~l~~~~~ 251 (253)
+++.+++.
T Consensus 265 ~~~~~~~~ 272 (273)
T PRK13225 265 QAVTQLMR 272 (273)
T ss_pred HHHHHHhc
Confidence 99887654
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=205.56 Aligned_cols=210 Identities=15% Similarity=0.154 Sum_probs=156.7
Q ss_pred CceEEEEecCCceeccCC-CHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHH
Q 039449 6 RLRCITVDVTGTLLAYKG-ELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSF 84 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (253)
..++|+||+||||+|+.. .+..++..+++++|.+....+.... ..|. +..+. +...+
T Consensus 130 ~~~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G~~~~~~e~~~~--------------~~G~----~~~~~----l~~ll 187 (381)
T PLN02575 130 GWLGAIFEWEGVIIEDNPDLENQAWLTLAQEEGKSPPPAFILRR--------------VEGM----KNEQA----ISEVL 187 (381)
T ss_pred CCCEEEEcCcCcceeCHHHHHHHHHHHHHHHcCCCCCHHHHHHH--------------hcCC----CHHHH----HHHHh
Confidence 579999999999999887 4556888899999987543322221 1232 22222 22222
Q ss_pred HHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeee
Q 039449 85 VRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVF 164 (253)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~ 164 (253)
.........+++...+...+..... ....++||+.++|+.|+++|++++|+||.....++..++.+|+.. +|+.++.
T Consensus 188 ~~~~~~~~~e~l~~~~~~~y~~~~~-~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~--yFd~Iv~ 264 (381)
T PLN02575 188 CWSRDPAELRRMATRKEEIYQALQG-GIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRG--FFSVIVA 264 (381)
T ss_pred hccCCHHHHHHHHHHHHHHHHHHhc-cCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHH--HceEEEe
Confidence 2111111123333444444443332 235789999999999999999999999999999999999999998 9999999
Q ss_pred ccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHHHH
Q 039449 165 SGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKE 244 (253)
Q Consensus 165 ~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~~ 244 (253)
+++....||+|+.|..++++++ +++++|++|||+. +|+++|+++|+++|++.+ +. ....+ ...+++++++.||..
T Consensus 265 sddv~~~KP~Peifl~A~~~lg-l~Peecl~IGDS~-~DIeAAk~AGm~~IgV~~-~~-~~~~l-~~Ad~iI~s~~EL~~ 339 (381)
T PLN02575 265 AEDVYRGKPDPEMFIYAAQLLN-FIPERCIVFGNSN-QTVEAAHDARMKCVAVAS-KH-PIYEL-GAADLVVRRLDELSI 339 (381)
T ss_pred cCcCCCCCCCHHHHHHHHHHcC-CCcccEEEEcCCH-HHHHHHHHcCCEEEEECC-CC-ChhHh-cCCCEEECCHHHHHH
Confidence 9998889999999999999999 9999999999999 899999999999999984 32 22222 235679999999854
Q ss_pred H
Q 039449 245 F 245 (253)
Q Consensus 245 ~ 245 (253)
.
T Consensus 340 ~ 340 (381)
T PLN02575 340 V 340 (381)
T ss_pred H
Confidence 3
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.3e-31 Score=198.86 Aligned_cols=212 Identities=16% Similarity=0.129 Sum_probs=159.1
Q ss_pred cCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHH
Q 039449 5 SRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSF 84 (253)
Q Consensus 5 ~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (253)
+++++|+||+||||+|+...+.+++..+++++|.+.. .+..... ..| ++..+. +...+
T Consensus 2 ~~~~~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~-~~~~~~~-------------~~g----~~~~~~----~~~~~ 59 (221)
T PRK10563 2 SQIEAVFFDCDGTLVDSEVICSRAYVTMFAEFGITLS-LEEVFKR-------------FKG----VKLYEI----IDIIS 59 (221)
T ss_pred CCCCEEEECCCCCCCCChHHHHHHHHHHHHHcCCCCC-HHHHHHH-------------hcC----CCHHHH----HHHHH
Confidence 4689999999999999998888999999999997643 2222211 011 222222 44445
Q ss_pred HHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCccee-Eee
Q 039449 85 VRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWD-FGV 163 (253)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~-~~~ 163 (253)
..++.+.+.+++...+...+.... .....++||+.++|+.|+ ++++|+||+....+...++.+|+.. +|+ .++
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~gv~~~L~~L~---~~~~ivTn~~~~~~~~~l~~~~l~~--~F~~~v~ 133 (221)
T PRK10563 60 KEHGVTLAKAELEPVYRAEVARLF-DSELEPIAGANALLESIT---VPMCVVSNGPVSKMQHSLGKTGMLH--YFPDKLF 133 (221)
T ss_pred HHhCCCCCHHHHHHHHHHHHHHHH-HccCCcCCCHHHHHHHcC---CCEEEEeCCcHHHHHHHHHhcChHH--hCcceEe
Confidence 666666556666666655443322 123578999999999983 8999999999988999999999998 886 455
Q ss_pred eccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHHH
Q 039449 164 FSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVK 243 (253)
Q Consensus 164 ~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~ 243 (253)
++.+.+..||+|+.|..++++++ +++++|++|||++ +|+++|+++|+++|++...+.. .........+++++.||.
T Consensus 134 ~~~~~~~~KP~p~~~~~a~~~~~-~~p~~~l~igDs~-~di~aA~~aG~~~i~~~~~~~~--~~~~~~~~~~~~~~~~l~ 209 (221)
T PRK10563 134 SGYDIQRWKPDPALMFHAAEAMN-VNVENCILVDDSS-AGAQSGIAAGMEVFYFCADPHN--KPIDHPLVTTFTDLAQLP 209 (221)
T ss_pred eHHhcCCCCCChHHHHHHHHHcC-CCHHHeEEEeCcH-hhHHHHHHCCCEEEEECCCCCC--cchhhhhhHHHHHHHHHH
Confidence 66678889999999999999999 9999999999999 8999999999999998732221 112222335789999988
Q ss_pred HHHhh
Q 039449 244 EFLTS 248 (253)
Q Consensus 244 ~~l~~ 248 (253)
..+.+
T Consensus 210 ~~~~~ 214 (221)
T PRK10563 210 ELWKA 214 (221)
T ss_pred HHHHH
Confidence 87764
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=201.02 Aligned_cols=219 Identities=21% Similarity=0.313 Sum_probs=160.8
Q ss_pred CceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHH
Q 039449 6 RLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFV 85 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (253)
.+|+|+||+||||+|+...+..++..+++++|.+....+.+... .|.+ ....+...+...+.
T Consensus 12 ~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~--------------~g~~----~~~~~~~~l~~~~~ 73 (272)
T PRK13223 12 LPRLVMFDLDGTLVDSVPDLAAAVDRMLLELGRPPAGLEAVRHW--------------VGNG----APVLVRRALAGSID 73 (272)
T ss_pred cCCEEEEcCCCccccCHHHHHHHHHHHHHHcCCCCCCHHHHHHH--------------hChh----HHHHHHHHhccccc
Confidence 47999999999999999999999999999999875443333221 1111 11111111111111
Q ss_pred HcCCC-CChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeee
Q 039449 86 RAGYD-YDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVF 164 (253)
Q Consensus 86 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~ 164 (253)
..+++ ...+++...+.+.+.... ....++||+.++|+.|+++|++++++||+....++..++.+|+.. +|+.++.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~--~f~~i~~ 149 (272)
T PRK13223 74 HDGVDDELAEQALALFMEAYADSH--ELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGR--YFRWIIG 149 (272)
T ss_pred ccCCCHHHHHHHHHHHHHHHHhcC--cCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHh--hCeEEEe
Confidence 11221 012233344444433321 224789999999999999999999999999988999999999988 8998888
Q ss_pred ccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhh-hcCCcccCCHHHHH
Q 039449 165 SGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWR-KSGAIVLPDLVAVK 243 (253)
Q Consensus 165 ~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~-~~~~~~i~~l~el~ 243 (253)
++..+..||+|+++..++++++ +++++|++|||+. +|+.+|+++|++++++.+ +......+. ..+++++.++.+|.
T Consensus 150 ~d~~~~~Kp~p~~~~~~~~~~g-~~~~~~l~IGD~~-~Di~aA~~aGi~~i~v~~-G~~~~~~l~~~~~~~vi~~l~el~ 226 (272)
T PRK13223 150 GDTLPQKKPDPAALLFVMKMAG-VPPSQSLFVGDSR-SDVLAAKAAGVQCVALSY-GYNHGRPIAEESPALVIDDLRALL 226 (272)
T ss_pred cCCCCCCCCCcHHHHHHHHHhC-CChhHEEEECCCH-HHHHHHHHCCCeEEEEec-CCCCchhhhhcCCCEEECCHHHHH
Confidence 8888888999999999999999 9999999999999 999999999999999983 433333332 34668999999999
Q ss_pred HHHhhh
Q 039449 244 EFLTSE 249 (253)
Q Consensus 244 ~~l~~~ 249 (253)
.++...
T Consensus 227 ~~~~~~ 232 (272)
T PRK13223 227 PGCADP 232 (272)
T ss_pred HHHhcc
Confidence 876643
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-30 Score=190.67 Aligned_cols=196 Identities=21% Similarity=0.295 Sum_probs=140.7
Q ss_pred ceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHHH
Q 039449 7 LRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFVR 86 (253)
Q Consensus 7 ~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (253)
+|+|+||+||||+|+... ...+...+...+. .....+..............| ...+..+.....+...+++
T Consensus 1 ik~viFD~dgTLiD~~~~-~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~ 71 (198)
T TIGR01428 1 IKALVFDVYGTLFDVHSV-VERFAELYGGRGE------ALSQLWRQKQLEYSWLRTLMG--PYADFWDLTREALRYLLGR 71 (198)
T ss_pred CcEEEEeCCCcCccHHHH-HHHHHHHhCchHH------HHHHHHHHHHHHHHHHHHccC--CCcCHHHHHHHHHHHHHHH
Confidence 578999999999998753 3333333322211 111111111111100000112 1223344445666777888
Q ss_pred cCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeecc
Q 039449 87 AGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSG 166 (253)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~ 166 (253)
.+.....+....... .+. .+.++||+.++|++|+++|++++++||++...+...++.+|+.. +|+.+++++
T Consensus 72 ~g~~~~~~~~~~~~~-~~~------~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~--~fd~i~~s~ 142 (198)
T TIGR01428 72 LGLEDDESAADRLAE-AYL------RLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDD--PFDAVLSAD 142 (198)
T ss_pred cCCCCCHHHHHHHHH-HHh------cCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChh--hhheeEehh
Confidence 887654443322222 221 24788999999999999999999999999999999999999988 999999999
Q ss_pred ccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCC
Q 039449 167 LEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKT 222 (253)
Q Consensus 167 ~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~ 222 (253)
+.+..||+|++|..++++++ ++|+++++|||++ +|+.+|+++|+++|++++.+.
T Consensus 143 ~~~~~KP~~~~~~~~~~~~~-~~p~~~~~vgD~~-~Di~~A~~~G~~~i~v~r~~~ 196 (198)
T TIGR01428 143 AVRAYKPAPQVYQLALEALG-VPPDEVLFVASNP-WDLGGAKKFGFKTAWVNRPGE 196 (198)
T ss_pred hcCCCCCCHHHHHHHHHHhC-CChhhEEEEeCCH-HHHHHHHHCCCcEEEecCCCC
Confidence 99999999999999999999 9999999999999 899999999999999997543
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-29 Score=191.97 Aligned_cols=224 Identities=20% Similarity=0.269 Sum_probs=151.4
Q ss_pred ccCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCC-----HHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHH
Q 039449 4 LSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPD-----YKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKT 78 (253)
Q Consensus 4 ~~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (253)
+.++|+|+||+||||+|+.+.+..++..+++.++...+. ..... .+... +....... -.....+...
T Consensus 7 ~~~~k~iiFDlDGTL~D~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~----~~~~~~~~~~ 78 (238)
T PRK10748 7 LGRISALTFDLDDTLYDNRPVILRTEQEALAFVQNYHPALRSFQNEDLQ-RLRQA---LREAEPEI----YHDVTRWRWR 78 (238)
T ss_pred CCCceeEEEcCcccccCChHHHHHHHHHHHHHHHHhCcchhhCCHHHHH-HHHHH---HHHhCchh----hCcHHHHHHH
Confidence 346799999999999999988888888777655322111 11111 11111 11100000 0012333445
Q ss_pred HHHHHHHHcCCCCChHH-HHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCc
Q 039449 79 CVRDSFVRAGYDYDEDT-FEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGT 157 (253)
Q Consensus 79 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~ 157 (253)
.+...++..+.+.+..+ ........+..+. ....++||+.++|+.|++. ++++++||++.. ++..|+..
T Consensus 79 ~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~-- 148 (238)
T PRK10748 79 AIEQAMLDAGLSAEEASAGADAAMINFAKWR--SRIDVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGD-- 148 (238)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHh--hcCCCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHH--
Confidence 56667777776532211 1111111222221 1257899999999999976 999999998864 47789988
Q ss_pred ceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhh--hhcCCcc
Q 039449 158 EWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEW--RKSGAIV 235 (253)
Q Consensus 158 ~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~--~~~~~~~ 235 (253)
+|+.++.+++.+..||+|+.|..++++++ +++++|+||||++.+|+.+|+++|+++|++++.+....... ...+++.
T Consensus 149 ~fd~i~~~~~~~~~KP~p~~~~~a~~~~~-~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~p~~~ 227 (238)
T PRK10748 149 YFEFVLRAGPHGRSKPFSDMYHLAAEKLN-VPIGEILHVGDDLTTDVAGAIRCGMQACWINPENGDLMQTWDSRLLPHIE 227 (238)
T ss_pred hhceeEecccCCcCCCcHHHHHHHHHHcC-CChhHEEEEcCCcHHHHHHHHHCCCeEEEEcCCCccccccccccCCCCEE
Confidence 99999999999999999999999999999 99999999999943899999999999999995432211111 1235579
Q ss_pred cCCHHHHHHHH
Q 039449 236 LPDLVAVKEFL 246 (253)
Q Consensus 236 i~~l~el~~~l 246 (253)
+.+|.||.++|
T Consensus 228 i~~l~el~~~~ 238 (238)
T PRK10748 228 ISRLASLTSLI 238 (238)
T ss_pred ECCHHHHHhhC
Confidence 99999998764
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-29 Score=204.56 Aligned_cols=208 Identities=17% Similarity=0.243 Sum_probs=161.8
Q ss_pred CceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHH
Q 039449 6 RLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFV 85 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (253)
.+++|+||+||||+|+...+..++..+++++|.+.. ..+... ..|. +..+ .+...+.
T Consensus 10 ~ik~VIFDlDGTLvDt~~~~~~a~~~~~~~~G~~~~-~~~~~~--------------~~G~----~~~~----~~~~~~~ 66 (382)
T PLN02940 10 LVSHVILDLDGTLLNTDGIVSDVLKAFLVKYGKQWD-GREAQK--------------IVGK----TPLE----AAATVVE 66 (382)
T ss_pred cCCEEEECCcCcCCcCHHHHHHHHHHHHHHcCCCCC-HHHHHH--------------hcCC----CHHH----HHHHHHH
Confidence 489999999999999999999999999999997643 222211 1222 2222 2444556
Q ss_pred HcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhh-hcCCCCCcceeEeee
Q 039449 86 RAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILP-ALGVNQGTEWDFGVF 164 (253)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~-~~gl~~~~~f~~~~~ 164 (253)
..+.+.+.+++...+...+..... ...++||+.++|++|+++|++++|+||.....+...++ ..|+.. +|+.+++
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~--~Fd~ii~ 142 (382)
T PLN02940 67 DYGLPCSTDEFNSEITPLLSEQWC--NIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKE--SFSVIVG 142 (382)
T ss_pred HhCCCCCHHHHHHHHHHHHHHHHc--cCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHh--hCCEEEe
Confidence 666665556655555554444332 35789999999999999999999999999988888887 789988 9999999
Q ss_pred ccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHHHH
Q 039449 165 SGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKE 244 (253)
Q Consensus 165 ~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~~ 244 (253)
+++.+..||+|+.+..++++++ +++++|++|||+. +|+++|+++|+.+|++.+ +...... ...++++++++.++..
T Consensus 143 ~d~v~~~KP~p~~~~~a~~~lg-v~p~~~l~VGDs~-~Di~aA~~aGi~~I~v~~-g~~~~~~-~~~ad~~i~sl~el~~ 218 (382)
T PLN02940 143 GDEVEKGKPSPDIFLEAAKRLN-VEPSNCLVIEDSL-PGVMAGKAAGMEVIAVPS-IPKQTHL-YSSADEVINSLLDLQP 218 (382)
T ss_pred hhhcCCCCCCHHHHHHHHHHcC-CChhHEEEEeCCH-HHHHHHHHcCCEEEEECC-CCcchhh-ccCccEEeCCHhHcCH
Confidence 9999999999999999999999 9999999999999 899999999999999984 3222222 2335578999998753
|
|
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.6e-29 Score=188.33 Aligned_cols=226 Identities=24% Similarity=0.319 Sum_probs=153.1
Q ss_pred ccCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCC--HHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHH
Q 039449 4 LSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPD--YKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVR 81 (253)
Q Consensus 4 ~~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (253)
++++++|+||+||||++............+...+..... ........ ..+..... ....+... ... ..+.
T Consensus 1 ~~~~k~i~FD~d~TL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~-~~~-----~~~~ 72 (229)
T COG1011 1 MMMIKAILFDLDGTLLDFDSAEFRAVLAEFAEIGVPETLEELALLKLIE-KLEARFLR-GEYTGEYG-LTL-----ERLL 72 (229)
T ss_pred CCceeEEEEecCCcccccchHHhHHHHHHHHHhchHHHhhhhHHHHHHH-HHHHHHHc-ccchHHHh-hhH-----HHHH
Confidence 356899999999999998775554444444433322211 11111000 01111100 00000000 000 1122
Q ss_pred HHHHHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeE
Q 039449 82 DSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDF 161 (253)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~ 161 (253)
..................... +.. .++++|++.++|+.++++ ++++++||+....+...++.+|+.+ +|+.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~--~Fd~ 143 (229)
T COG1011 73 ELLERLLGDEDAELVEELLAA-LAK-----LLPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLD--YFDA 143 (229)
T ss_pred HHHHhhcccccHHHHHHHHHH-HHh-----hCccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChh--hhhe
Confidence 222222222233333333333 322 248889999999999999 9999999999999999999999988 9999
Q ss_pred eeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHH
Q 039449 162 GVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVA 241 (253)
Q Consensus 162 ~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~e 241 (253)
++++++.|..||+|++|+.+++++| ++|++++||||++.||+.+|+++|+++||+++.+....+. ...++..+.++.+
T Consensus 144 v~~s~~~g~~KP~~~~f~~~~~~~g-~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~-~~~~~~~i~~l~~ 221 (229)
T COG1011 144 VFISEDVGVAKPDPEIFEYALEKLG-VPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDA-LEAPDYEISSLAE 221 (229)
T ss_pred EEEecccccCCCCcHHHHHHHHHcC-CCcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCC-ccCCceEEcCHHH
Confidence 9999999999999999999999999 9999999999999999999999999999999644332111 1345689999999
Q ss_pred HHHHHhh
Q 039449 242 VKEFLTS 248 (253)
Q Consensus 242 l~~~l~~ 248 (253)
+.+++..
T Consensus 222 l~~~~~~ 228 (229)
T COG1011 222 LLDLLER 228 (229)
T ss_pred HHHHHhh
Confidence 9988764
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-29 Score=185.67 Aligned_cols=186 Identities=16% Similarity=0.167 Sum_probs=143.9
Q ss_pred cccCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHH
Q 039449 3 LLSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRD 82 (253)
Q Consensus 3 ~~~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (253)
|+.++++|+||+||||+|+...+..++..+++++|.+.. ...... ..|. +..+. +..
T Consensus 1 ~~~~~~~viFD~DGTLiDs~~~~~~a~~~~~~~~g~~~~-~~~~~~--------------~~g~----~~~~~----~~~ 57 (188)
T PRK10725 1 MYDRYAGLIFDMDGTILDTEPTHRKAWREVLGRYGLQFD-EQAMVA--------------LNGS----PTWRI----AQA 57 (188)
T ss_pred CCCcceEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCC-HHHHHH--------------hcCC----CHHHH----HHH
Confidence 456789999999999999999999999999999998632 222211 1221 22222 333
Q ss_pred HHHHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEe
Q 039449 83 SFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFG 162 (253)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~ 162 (253)
.+...+...+.+.+...+..++..... ....++|+ .++|..|++. ++++|+||+....++..++.+|+.. +|+.+
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~--~fd~i 132 (188)
T PRK10725 58 IIELNQADLDPHALAREKTEAVKSMLL-DSVEPLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRR--YFDAV 132 (188)
T ss_pred HHHHhCCCCCHHHHHHHHHHHHHHHHh-ccCCCccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHh--HceEE
Confidence 344445444555554444444433321 22467786 5899999876 8999999999999999999999998 99999
Q ss_pred eeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEc
Q 039449 163 VFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVD 218 (253)
Q Consensus 163 ~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~ 218 (253)
+++++.+..||+|+.|..++++++ +++++|++|||+. +|+++|+++|+++|.+.
T Consensus 133 ~~~~~~~~~KP~p~~~~~~~~~~~-~~~~~~l~igDs~-~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 133 VAADDVQHHKPAPDTFLRCAQLMG-VQPTQCVVFEDAD-FGIQAARAAGMDAVDVR 186 (188)
T ss_pred EehhhccCCCCChHHHHHHHHHcC-CCHHHeEEEeccH-hhHHHHHHCCCEEEeec
Confidence 999999999999999999999999 9999999999999 89999999999999885
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-29 Score=187.97 Aligned_cols=213 Identities=23% Similarity=0.249 Sum_probs=157.3
Q ss_pred CceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHH
Q 039449 6 RLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFV 85 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (253)
++++++||+||||+|+...+.++|.++++++|+...... .... .|.. .... +.....
T Consensus 1 ~~~avIFD~DGvLvDse~~~~~a~~~~~~~~g~~~~~~~-~~~~--------------~g~~----~~~~----~~~~~~ 57 (221)
T COG0637 1 MIKAVIFDMDGTLVDSEPLHARAWLEALKEYGIEISDEE-IREL--------------HGGG----IARI----IDLLRK 57 (221)
T ss_pred CCcEEEEcCCCCcCcchHHHHHHHHHHHHHcCCCCCHHH-HHHH--------------HCCC----hHHH----HHHHHH
Confidence 479999999999999999999999999999998754321 1110 1111 1111 111122
Q ss_pred HcCCC--CChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEee
Q 039449 86 RAGYD--YDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGV 163 (253)
Q Consensus 86 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~ 163 (253)
..... .+............... .....+.||+.++|.+|+++|+++++.|++....++..++.+|+.+ +|+.++
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~--~f~~~v 133 (221)
T COG0637 58 LAAGEDPADLAELERLLYEAEALE--LEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLD--YFDVIV 133 (221)
T ss_pred HhcCCcccCHHHHHHHHHHHHHhh--hcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChh--hcchhc
Confidence 22211 12222233222222222 2335889999999999999999999999999999999999999999 999999
Q ss_pred eccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCC---hhhhhhcCCcccCCHH
Q 039449 164 FSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPD---AKEWRKSGAIVLPDLV 240 (253)
Q Consensus 164 ~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~---~~~~~~~~~~~i~~l~ 240 (253)
+++++..+||.|+.|..+++++| ++|++|++|+|++ +++.+|+++||.+|.+.. +.+. .............++.
T Consensus 134 ~~~dv~~~KP~Pd~yL~Aa~~Lg-v~P~~CvviEDs~-~Gi~Aa~aAGm~vv~v~~-~~~~~~~~~~~~~~~~~~~~~~~ 210 (221)
T COG0637 134 TADDVARGKPAPDIYLLAAERLG-VDPEECVVVEDSP-AGIQAAKAAGMRVVGVPA-GHDRPHLDPLDAHGADTVLLDLA 210 (221)
T ss_pred cHHHHhcCCCCCHHHHHHHHHcC-CChHHeEEEecch-hHHHHHHHCCCEEEEecC-CCCccccchhhhhhcchhhccHH
Confidence 99999999999999999999999 9999999999999 999999999999999995 3331 1111222346777888
Q ss_pred HHHHHHhh
Q 039449 241 AVKEFLTS 248 (253)
Q Consensus 241 el~~~l~~ 248 (253)
++...+.+
T Consensus 211 ~l~~~~~~ 218 (221)
T COG0637 211 ELPALLEA 218 (221)
T ss_pred HHHHHHHh
Confidence 88777654
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-28 Score=180.46 Aligned_cols=181 Identities=21% Similarity=0.270 Sum_probs=137.3
Q ss_pred EEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHHHcC
Q 039449 9 CITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFVRAG 88 (253)
Q Consensus 9 ~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (253)
+|+||+||||+|+...+..++..+++.+|.+.. ...... ..|. +..+ .++..+...+
T Consensus 1 ~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~-~~~~~~--------------~~g~----~~~~----~~~~~~~~~~ 57 (185)
T TIGR01990 1 AVIFDLDGVITDTAEYHYLAWKALADELGIPFD-EEFNES--------------LKGV----SRED----SLERILDLGG 57 (185)
T ss_pred CeEEcCCCccccChHHHHHHHHHHHHHcCCCCC-HHHHHH--------------hcCC----ChHH----HHHHHHHhcC
Confidence 489999999999999999999999999998632 221110 1121 2222 2444455566
Q ss_pred CCCChHHHHHHH---HHHHHHhCC-CCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeee
Q 039449 89 YDYDEDTFEKIF---RRIYASFGS-SAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVF 164 (253)
Q Consensus 89 ~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~ 164 (253)
...+.+...... ...+..... .....++||+.++|++|+++|++++++||+.. ....++.+|+.. +|+.++.
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~--~f~~~~~ 133 (185)
T TIGR01990 58 KKYSEEEKEELAERKNDYYVELLKELTPADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLID--YFDAIVD 133 (185)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhcCCcccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHh--hCcEEEe
Confidence 555544433322 222222211 12247899999999999999999999998643 567899999998 9999999
Q ss_pred ccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEc
Q 039449 165 SGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVD 218 (253)
Q Consensus 165 ~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~ 218 (253)
+.+.+..||+|+.|..++++++ +++++|++|||+. +|+.+|+++|+++|.|.
T Consensus 134 ~~~~~~~kp~p~~~~~~~~~~~-~~~~~~v~vgD~~-~di~aA~~aG~~~i~v~ 185 (185)
T TIGR01990 134 PAEIKKGKPDPEIFLAAAEGLG-VSPSECIGIEDAQ-AGIEAIKAAGMFAVGVG 185 (185)
T ss_pred hhhcCCCCCChHHHHHHHHHcC-CCHHHeEEEecCH-HHHHHHHHcCCEEEecC
Confidence 9998999999999999999999 9999999999999 89999999999999873
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=185.37 Aligned_cols=128 Identities=23% Similarity=0.266 Sum_probs=106.4
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCc
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEE 192 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 192 (253)
..++||+.++|+.|+++|++++++||+....++..++.+|+.. +|+.++++++.+..||+|+.|..++++++ +++++
T Consensus 92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~--~fd~iv~s~~~~~~KP~p~~~~~~~~~~~-~~p~~ 168 (224)
T PRK14988 92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDA--HLDLLLSTHTFGYPKEDQRLWQAVAEHTG-LKAER 168 (224)
T ss_pred CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHH--HCCEEEEeeeCCCCCCCHHHHHHHHHHcC-CChHH
Confidence 5789999999999999999999999999999999999999988 99999999999999999999999999999 99999
Q ss_pred eEEEcCCcccchhhhhhcCCeE-EEEcCCCCCChhhhhhcCCcccCCHHHHHHHHhh
Q 039449 193 ALHIGDSFRKDYVPAKSVGMHA-LLVDRFKTPDAKEWRKSGAIVLPDLVAVKEFLTS 248 (253)
Q Consensus 193 ~~~iGD~~~~Di~~a~~~G~~~-i~~~~~~~~~~~~~~~~~~~~i~~l~el~~~l~~ 248 (253)
|++|||++ +|+++|+++|+++ +++.. +...... ......++++++.+++..
T Consensus 169 ~l~igDs~-~di~aA~~aG~~~~~~v~~-~~~~~~~---~~~~~~~~~~~~~~~~~~ 220 (224)
T PRK14988 169 TLFIDDSE-PILDAAAQFGIRYCLGVTN-PDSGIAE---KQYQRHPSLNDYRRLIPS 220 (224)
T ss_pred EEEEcCCH-HHHHHHHHcCCeEEEEEeC-CCCCccc---hhccCCCcHHHHHHHhhh
Confidence 99999999 8999999999986 55653 2222111 122334556655555543
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=180.96 Aligned_cols=182 Identities=21% Similarity=0.299 Sum_probs=139.1
Q ss_pred ceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHHH
Q 039449 7 LRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFVR 86 (253)
Q Consensus 7 ~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (253)
+|+|+||+||||+|+.+.+..++..+++++|.... . .... ...| .+..+. +...+..
T Consensus 1 ~~~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~-~-~~~~-------------~~~g----~~~~~~----~~~~~~~ 57 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPLHAQAWKHLADKYGIEFD-K-QYNT-------------SLGG----LSREDI----LRAILKL 57 (185)
T ss_pred CCeEEEcCCCcccCChHHHHHHHHHHHHHcCCCCC-H-HHHH-------------HcCC----CCHHHH----HHHHHHh
Confidence 58999999999999999888899999999997532 1 1110 0122 122333 3333444
Q ss_pred cCCCCChHHHHH---HHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEee
Q 039449 87 AGYDYDEDTFEK---IFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGV 163 (253)
Q Consensus 87 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~ 163 (253)
.+...+.+++.. .+..++..........++||+.++|+.|+++|++++++||+ ..++.+++.+|+.. +|+.++
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~--~f~~v~ 133 (185)
T TIGR02009 58 RKPGLSLETIHQLAERKNELYRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTD--YFDAIV 133 (185)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHH--HCCEee
Confidence 433334444333 33334433332234588999999999999999999999998 55788899999998 999998
Q ss_pred eccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEE
Q 039449 164 FSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLV 217 (253)
Q Consensus 164 ~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~ 217 (253)
.++..+..||+|+.+..++++++ ++++++++|||+. +|+++|+++|+++|.|
T Consensus 134 ~~~~~~~~kp~~~~~~~~~~~~~-~~~~~~v~IgD~~-~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 134 DADEVKEGKPHPETFLLAAELLG-VSPNECVVFEDAL-AGVQAARAAGMFAVAV 185 (185)
T ss_pred ehhhCCCCCCChHHHHHHHHHcC-CCHHHeEEEeCcH-hhHHHHHHCCCeEeeC
Confidence 88888889999999999999999 9999999999999 8999999999999875
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.4e-28 Score=189.01 Aligned_cols=213 Identities=20% Similarity=0.230 Sum_probs=144.3
Q ss_pred cCceEEEEecCCceeccC-CCHHHHHHHHHHHcCCCCC--CHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHH
Q 039449 5 SRLRCITVDVTGTLLAYK-GELGDYYCMAAKSVGLPCP--DYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVR 81 (253)
Q Consensus 5 ~~~k~i~fD~DGTL~~~~-~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (253)
.++++|+||+||||+|+. ..+..++..+++++|++.. ..+.... +. .+|.+ .....
T Consensus 38 ~~~k~VIFDlDGTLvDS~~~~~~~a~~~~l~~~G~~~~~~~~~~~~~-~~-----------~~g~~----~~~~~----- 96 (286)
T PLN02779 38 ALPEALLFDCDGVLVETERDGHRVAFNDAFKEFGLRPVEWDVELYDE-LL-----------NIGGG----KERMT----- 96 (286)
T ss_pred cCCcEEEEeCceeEEccccHHHHHHHHHHHHHcCCCCCCCCHHHHHH-HH-----------ccCCC----hHHHH-----
Confidence 458999999999999999 8889999999999998432 2221110 00 01111 00000
Q ss_pred HHHHHcCCC--------CCh-------HHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhh
Q 039449 82 DSFVRAGYD--------YDE-------DTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDV 146 (253)
Q Consensus 82 ~~~~~~~~~--------~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~ 146 (253)
..+...+.. .+. +.+.......+........+.++||+.++|..|+++|++++|+||+....+..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~ 176 (286)
T PLN02779 97 WYFNENGWPTSTIEKAPKDEEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSK 176 (286)
T ss_pred HHHHHcCCCccccccCCccchhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHH
Confidence 001111100 011 11111222233322222224789999999999999999999999999988888
Q ss_pred hhhhcCCCC-CcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCCh
Q 039449 147 ILPALGVNQ-GTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDA 225 (253)
Q Consensus 147 ~l~~~gl~~-~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~ 225 (253)
+++.++... ..+|+.+ .+++.+..||+|++|..++++++ +++++|++|||+. +|+.+|+++|+++|++.+ +....
T Consensus 177 ~l~~~~~~~~~~~~~~v-~~~~~~~~KP~p~~~~~a~~~~~-~~p~~~l~IGDs~-~Di~aA~~aG~~~i~v~~-g~~~~ 252 (286)
T PLN02779 177 IVNTLLGPERAQGLDVF-AGDDVPKKKPDPDIYNLAAETLG-VDPSRCVVVEDSV-IGLQAAKAAGMRCIVTKS-SYTAD 252 (286)
T ss_pred HHHHhccccccCceEEE-eccccCCCCCCHHHHHHHHHHhC-cChHHEEEEeCCH-HhHHHHHHcCCEEEEEcc-CCccc
Confidence 887764332 1134443 66667778999999999999999 9999999999999 899999999999999983 44433
Q ss_pred hhhhhcCCcccCCHHHHH
Q 039449 226 KEWRKSGAIVLPDLVAVK 243 (253)
Q Consensus 226 ~~~~~~~~~~i~~l~el~ 243 (253)
+.+ ...+++++++.++.
T Consensus 253 ~~l-~~ad~vi~~~~~l~ 269 (286)
T PLN02779 253 EDF-SGADAVFDCLGDVP 269 (286)
T ss_pred ccc-CCCcEEECChhhcc
Confidence 444 34668899999874
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-28 Score=202.74 Aligned_cols=214 Identities=17% Similarity=0.192 Sum_probs=154.1
Q ss_pred cCceEEEEecCCceeccCCCHHHHHHHHHHHcCC-----CCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHH
Q 039449 5 SRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGL-----PCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTC 79 (253)
Q Consensus 5 ~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (253)
+++++|+||+||||+|+...+..++.+++++++. .....+.+.. ..|. +..+.+..
T Consensus 239 ~m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~G~----~~~~~~~~- 299 (459)
T PRK06698 239 EMLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQLWDTVTPIDKYRE--------------IMGV----PLPKVWEA- 299 (459)
T ss_pred HhhhheeEccCCceecchhHHHHHHHHHHHHHhhhcccCCCCCHHHHHH--------------HcCC----ChHHHHHH-
Confidence 3479999999999999999999999999998742 1112222211 1222 22333322
Q ss_pred HHHHHHHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcce
Q 039449 80 VRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEW 159 (253)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f 159 (253)
.+...+.. ..++....+.+.+.........+++||+.++|++|+++|++++|+||+....++..++.+|+.. +|
T Consensus 300 ---l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~--~f 373 (459)
T PRK06698 300 ---LLPDHSLE-IREQTDAYFLERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQ--WV 373 (459)
T ss_pred ---Hhhhcchh-HHHHHHHHHHHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHh--hc
Confidence 22222221 1123333343333332222235889999999999999999999999999999999999999998 99
Q ss_pred eEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCH
Q 039449 160 DFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDL 239 (253)
Q Consensus 160 ~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l 239 (253)
+.++++++.. .||+|+.+..++++++ +++|++|||++ +|+.+|+++|+.+|++.+ +......+ ..++++++++
T Consensus 374 ~~i~~~d~v~-~~~kP~~~~~al~~l~---~~~~v~VGDs~-~Di~aAk~AG~~~I~v~~-~~~~~~~~-~~~d~~i~~l 446 (459)
T PRK06698 374 TETFSIEQIN-SLNKSDLVKSILNKYD---IKEAAVVGDRL-SDINAAKDNGLIAIGCNF-DFAQEDEL-AQADIVIDDL 446 (459)
T ss_pred ceeEecCCCC-CCCCcHHHHHHHHhcC---cceEEEEeCCH-HHHHHHHHCCCeEEEEeC-CCCccccc-CCCCEEeCCH
Confidence 9988877663 4678889999998876 58999999999 999999999999999984 33322333 3467899999
Q ss_pred HHHHHHHhhhh
Q 039449 240 VAVKEFLTSEI 250 (253)
Q Consensus 240 ~el~~~l~~~~ 250 (253)
.|+.+++.+..
T Consensus 447 ~el~~~l~~~~ 457 (459)
T PRK06698 447 LELKGILSTVQ 457 (459)
T ss_pred HHHHHHHHHHh
Confidence 99999887643
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.9e-28 Score=176.02 Aligned_cols=175 Identities=29% Similarity=0.405 Sum_probs=134.9
Q ss_pred EEEecCCceeccCCCHHHHHHH-HHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHHHcC
Q 039449 10 ITVDVTGTLLAYKGELGDYYCM-AAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFVRAG 88 (253)
Q Consensus 10 i~fD~DGTL~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (253)
|+||+||||+++...+.+++.. +++.++.+ ...+.+... . ..+..+. +...+.+.+
T Consensus 1 iifD~dgtL~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--------------~----~~~~~~~----~~~~~~~~~ 57 (176)
T PF13419_consen 1 IIFDLDGTLVDTDPAIFRALQRLALEEFGLE-ISAEELREL--------------F----GKSYEEA----LERLLERFG 57 (176)
T ss_dssp EEEESBTTTEEHHHHHHHHHHHHHHHHTTHH-HHHHHHHHH--------------T----TSHHHHH----HHHHHHHHH
T ss_pred cEEECCCCcEeCHHHHHHHHHHHHHHHhCCC-CCHHHHHHH--------------h----CCCHHHH----HHHhhhccc
Confidence 7999999999988877777776 46677654 111111110 0 1122233 333343333
Q ss_pred CCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeecccc
Q 039449 89 YDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLE 168 (253)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~ 168 (253)
.. ...+.+.+.++... ....++||+.++|+.|+++|++++++||++...++..++.+|+.. +|+.++++++.
T Consensus 58 ~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~--~f~~i~~~~~~ 129 (176)
T PF13419_consen 58 ID--PEEIQELFREYNLE----SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDD--YFDEIISSDDV 129 (176)
T ss_dssp HH--HHHHHHHHHHHHHH----GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGG--GCSEEEEGGGS
T ss_pred hh--HHHHHHHhhhhhhh----hccchhhhhhhhhhhcccccceeEEeecCCccccccccccccccc--ccccccccchh
Confidence 21 34445555554211 224899999999999999999999999999999999999999998 99999999999
Q ss_pred CccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEE
Q 039449 169 GVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLV 217 (253)
Q Consensus 169 ~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~ 217 (253)
+..||+++.|..++++++ ++|+++++|||++ .|+.+|+++|+++|++
T Consensus 130 ~~~Kp~~~~~~~~~~~~~-~~p~~~~~vgD~~-~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 130 GSRKPDPDAYRRALEKLG-IPPEEILFVGDSP-SDVEAAKEAGIKTIWV 176 (176)
T ss_dssp SSSTTSHHHHHHHHHHHT-SSGGGEEEEESSH-HHHHHHHHTTSEEEEE
T ss_pred hhhhhHHHHHHHHHHHcC-CCcceEEEEeCCH-HHHHHHHHcCCeEEeC
Confidence 999999999999999999 9999999999999 8999999999999986
|
... |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-26 Score=205.94 Aligned_cols=210 Identities=18% Similarity=0.243 Sum_probs=156.5
Q ss_pred ccCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHH
Q 039449 4 LSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDS 83 (253)
Q Consensus 4 ~~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (253)
.+++++|+||+||||+|+...+.+++..+++++|++. ..+..... .|. +..++ +...
T Consensus 72 ~~~ikaVIFDlDGTLiDS~~~~~~a~~~~~~~~G~~i-t~e~~~~~--------------~G~----~~~~~----~~~~ 128 (1057)
T PLN02919 72 WGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEV-TVEDFVPF--------------MGT----GEANF----LGGV 128 (1057)
T ss_pred CCCCCEEEECCCCCeEeChHHHHHHHHHHHHHcCCCC-CHHHHHHH--------------hCC----CHHHH----HHHH
Confidence 4578999999999999999999999999999999863 22222211 121 22222 2222
Q ss_pred HHHcCCC-CChHHHHHHH-HHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCC-CCccee
Q 039449 84 FVRAGYD-YDEDTFEKIF-RRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVN-QGTEWD 160 (253)
Q Consensus 84 ~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~-~~~~f~ 160 (253)
....+.. .+.++..+.+ ..+...........++||+.++|++|+++|++++|+||.....++..++.+|+. . +|+
T Consensus 129 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~--~Fd 206 (1057)
T PLN02919 129 ASVKGVKGFDPDAAKKRFFEIYLEKYAKPNSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLS--MFD 206 (1057)
T ss_pred HHhcCCCCCCHHHHHHHHHHHHHHHhhhcccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChh--HCC
Confidence 3333332 2333332222 222222211112357999999999999999999999999999999999999996 5 899
Q ss_pred EeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhh-hcCCcccCCH
Q 039449 161 FGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWR-KSGAIVLPDL 239 (253)
Q Consensus 161 ~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~-~~~~~~i~~l 239 (253)
.++.+++.+..||+|++|..++++++ +++++|++|||+. +|+++|+++|+.+|++.+ +.. ...+. ..++++++++
T Consensus 207 ~iv~~~~~~~~KP~Pe~~~~a~~~lg-v~p~e~v~IgDs~-~Di~AA~~aGm~~I~v~~-~~~-~~~L~~~~a~~vi~~l 282 (1057)
T PLN02919 207 AIVSADAFENLKPAPDIFLAAAKILG-VPTSECVVIEDAL-AGVQAARAAGMRCIAVTT-TLS-EEILKDAGPSLIRKDI 282 (1057)
T ss_pred EEEECcccccCCCCHHHHHHHHHHcC-cCcccEEEEcCCH-HHHHHHHHcCCEEEEECC-CCC-HHHHhhCCCCEEECCh
Confidence 99999999999999999999999999 9999999999999 899999999999999995 433 34443 3345899999
Q ss_pred HHH
Q 039449 240 VAV 242 (253)
Q Consensus 240 ~el 242 (253)
.++
T Consensus 283 ~el 285 (1057)
T PLN02919 283 GNI 285 (1057)
T ss_pred HHC
Confidence 996
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-26 Score=169.24 Aligned_cols=175 Identities=20% Similarity=0.231 Sum_probs=126.9
Q ss_pred eEEEEecCCceeccCCCHHHHHHHHHH-----HcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHH
Q 039449 8 RCITVDVTGTLLAYKGELGDYYCMAAK-----SVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRD 82 (253)
Q Consensus 8 k~i~fD~DGTL~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (253)
++|+||+||||+|+...+..++.+++. ++|++......+...+... +|.. +..
T Consensus 1 ~~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~----------~g~~------------~~~ 58 (184)
T TIGR01993 1 DVWFFDLDNTLYPHSAGIFLQIDRNITEFVAARLKLSEEEARVLRKDYYRE----------YGTT------------LAG 58 (184)
T ss_pred CeEEEeCCCCCCCCcccHHHHHHHHHHHHHHHHcCcCHHHHHHHHHHHHHH----------HchH------------HHH
Confidence 479999999999998888888776654 4565433222222111100 1110 111
Q ss_pred HHHHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEe
Q 039449 83 SFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFG 162 (253)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~ 162 (253)
.+.... .+.+.+...+... .......++||+.++|+.|+ ++++++||++...+...++.+|+.. +|+.+
T Consensus 59 ~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~--~fd~i 127 (184)
T TIGR01993 59 LMILHE--IDADEYLRYVHGR----LPYEKLKPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIED--CFDGI 127 (184)
T ss_pred HHHhhC--CCHHHHHHHHhcc----CCHHhCCCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHh--hhCeE
Confidence 122222 2333333333221 11123478899999999997 4789999999999999999999988 99999
Q ss_pred eeccccCc----cCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEE
Q 039449 163 VFSGLEGV----EKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLV 217 (253)
Q Consensus 163 ~~~~~~~~----~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~ 217 (253)
+.++..+. .||+|+.|..++++++ ++++++++|||++ .|+.+|+++|+++|+|
T Consensus 128 ~~~~~~~~~~~~~KP~p~~~~~~~~~~~-~~~~~~l~vgD~~-~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 128 FCFDTANPDYLLPKPSPQAYEKALREAG-VDPERAIFFDDSA-RNIAAAKALGMKTVLV 184 (184)
T ss_pred EEeecccCccCCCCCCHHHHHHHHHHhC-CCccceEEEeCCH-HHHHHHHHcCCEEeeC
Confidence 99888877 4999999999999999 9999999999999 8999999999999975
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-25 Score=165.57 Aligned_cols=183 Identities=11% Similarity=0.124 Sum_probs=129.3
Q ss_pred EEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHHH--
Q 039449 9 CITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFVR-- 86 (253)
Q Consensus 9 ~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 86 (253)
+|+||+||||+|+...+..++..+++++|......+.+...+ |.+..-....+....+...+..
T Consensus 2 ~viFD~DGTLiDs~~~~~~a~~~~~~~~g~~~~~~~~~~~~~--------------g~~~~~~~~~~~~~~~~~~~~~~~ 67 (197)
T TIGR01548 2 ALVLDMDGVMADVSQSYRRAIIDTVEHFGGVSVTHADIDHTK--------------LAGNANNDWQLTHRLVVDGLNSAS 67 (197)
T ss_pred ceEEecCceEEechHHHHHHHHHHHHHHcCCCCCHHHHHHHH--------------HccCccCchHHHHHHHHHhhhccc
Confidence 689999999999999999999999999986544444333211 1110000000000001111111
Q ss_pred ---cCCCCChHHHHHHHHHHHHHhCC-C-------CCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCC
Q 039449 87 ---AGYDYDEDTFEKIFRRIYASFGS-S-------APYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQ 155 (253)
Q Consensus 87 ---~~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~ 155 (253)
.......+.+...+..++..... . ....+.++..++|+.|++.|++++|+||+....++.+++.+|+..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~ 147 (197)
T TIGR01548 68 SERVRDAPTLEAVTAQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEI 147 (197)
T ss_pred chhccCCccHHHHHHHHHHHHcCCcccccccchhhhccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchh
Confidence 01122345555556555543210 0 012345567999999999999999999999999999999999998
Q ss_pred CcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhc
Q 039449 156 GTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSV 210 (253)
Q Consensus 156 ~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~ 210 (253)
+|+.++++++... ||+|+.+..++++++ +++++|++|||++ +|+.+|+++
T Consensus 148 --~f~~~~~~~~~~~-KP~p~~~~~~~~~~~-~~~~~~i~vGD~~-~Di~aA~~a 197 (197)
T TIGR01548 148 --LFPVQIWMEDCPP-KPNPEPLILAAKALG-VEACHAAMVGDTV-DDIITGRKA 197 (197)
T ss_pred --hCCEEEeecCCCC-CcCHHHHHHHHHHhC-cCcccEEEEeCCH-HHHHHHHhC
Confidence 9999888888776 999999999999999 9999999999999 899999875
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.2e-26 Score=170.43 Aligned_cols=103 Identities=32% Similarity=0.451 Sum_probs=91.6
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcch--hhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCC
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRY--QDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAP 190 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~--~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~ 190 (253)
..++||+.++|+.|+++|++++++||+.... ....+...++.. +|+.++.+++.+..||+|+.|..+++++| +++
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~--~fd~v~~s~~~~~~KP~p~~~~~~~~~~g-~~~ 169 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMA--LFDAVVESCLEGLRKPDPRIYQLMLERLG-VAP 169 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHh--hCCEEEEeeecCCCCCCHHHHHHHHHHcC-CCH
Confidence 5789999999999999999999999987654 333344567777 89999999888889999999999999999 999
Q ss_pred CceEEEcCCcccchhhhhhcCCeEEEEcC
Q 039449 191 EEALHIGDSFRKDYVPAKSVGMHALLVDR 219 (253)
Q Consensus 191 ~~~~~iGD~~~~Di~~a~~~G~~~i~~~~ 219 (253)
++|+||||+. .|+.+|+++|+++|++.+
T Consensus 170 ~~~l~i~D~~-~di~aA~~aG~~~i~v~~ 197 (211)
T TIGR02247 170 EECVFLDDLG-SNLKPAAALGITTIKVSD 197 (211)
T ss_pred HHeEEEcCCH-HHHHHHHHcCCEEEEECC
Confidence 9999999999 899999999999999984
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.6e-25 Score=166.64 Aligned_cols=200 Identities=19% Similarity=0.190 Sum_probs=142.7
Q ss_pred cCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHHHcCCC--C
Q 039449 14 VTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFVRAGYD--Y 91 (253)
Q Consensus 14 ~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 91 (253)
+||||+|+...+..++..+++++|+.. ..+.... ..|. +..+. +...+...+.+ .
T Consensus 1 ~DGTL~Ds~~~~~~a~~~~~~~~g~~~-~~~~~~~--------------~~G~----~~~~~----~~~~~~~~~~~~~~ 57 (220)
T PLN02811 1 MDGLLLDTEKFYTEVQEKILARYGKTF-DWSLKAK--------------MMGK----KAIEA----ARIFVEESGLSDSL 57 (220)
T ss_pred CCCcceecHHHHHHHHHHHHHHcCCCC-CHHHHHH--------------ccCC----CHHHH----HHHHHHHhCCCCCC
Confidence 699999999999999999999999863 3221111 1232 22222 23334444443 2
Q ss_pred ChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhh-hhhhcCCCCCcceeEeeecc--cc
Q 039449 92 DEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDV-ILPALGVNQGTEWDFGVFSG--LE 168 (253)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~-~l~~~gl~~~~~f~~~~~~~--~~ 168 (253)
..+.+......++..... ...++||+.++|+.|+++|++++|+||........ ..+..++.. +|+.+++++ +.
T Consensus 58 ~~~~~~~~~~~~~~~~~~--~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~--~f~~i~~~~~~~~ 133 (220)
T PLN02811 58 SPEDFLVEREAMLQDLFP--TSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFS--LMHHVVTGDDPEV 133 (220)
T ss_pred CHHHHHHHHHHHHHHHHh--hCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHh--hCCEEEECChhhc
Confidence 233444434444433221 24788999999999999999999999998764443 344457777 899888888 77
Q ss_pred CccCCCHHHHHHHHHHhC--CCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHHH
Q 039449 169 GVEKPDPRIYEIALERAG--NIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVK 243 (253)
Q Consensus 169 ~~~kp~~~~~~~~~~~~~--~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~ 243 (253)
+..||+|++|..++++++ .+++++|++|||+. .|+++|+++|+++|++.+ +....... ..+++++.++.|+.
T Consensus 134 ~~~KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~-~di~aA~~aG~~~i~v~~-~~~~~~~~-~~~d~vi~~~~e~~ 207 (220)
T PLN02811 134 KQGKPAPDIFLAAARRFEDGPVDPGKVLVFEDAP-SGVEAAKNAGMSVVMVPD-PRLDKSYC-KGADQVLSSLLDFK 207 (220)
T ss_pred cCCCCCcHHHHHHHHHhCCCCCCccceEEEeccH-hhHHHHHHCCCeEEEEeC-CCCcHhhh-hchhhHhcCHhhCC
Confidence 788999999999999993 28999999999999 899999999999999984 33333332 34567899998764
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.7e-25 Score=161.85 Aligned_cols=185 Identities=15% Similarity=0.221 Sum_probs=127.8
Q ss_pred eEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHHHc
Q 039449 8 RCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFVRA 87 (253)
Q Consensus 8 k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (253)
.+|+||+||||++.... ..+.......+. ........+... ..... ...+.++..+++ ....+..
T Consensus 1 ~~viFDldgvL~d~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~----~~~G~~~~~~~~----~~~~~~~ 65 (199)
T PRK09456 1 MLYIFDLGNVIVDIDFN--RVLGVWSDLSRV---PLATLKKRFTMG--EAFHQ----HERGEISDEAFA----EALCHEM 65 (199)
T ss_pred CEEEEeCCCccccCcHH--HHHHHHHHhcCC---CHHHHHHHHhcC--cHHHH----HhcCCCCHHHHH----HHHHHHh
Confidence 37999999999997532 111111111222 222222222110 00000 011234545543 3345556
Q ss_pred CCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhh-cCCCCCcceeEeeecc
Q 039449 88 GYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPA-LGVNQGTEWDFGVFSG 166 (253)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~gl~~~~~f~~~~~~~ 166 (253)
+.+.+.+.+...+...+ ..++||+.++|+.|+++|++++|+||++.......+.. .++.. +|+.+++++
T Consensus 66 ~~~~~~~~~~~~~~~~~--------~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~--~fd~v~~s~ 135 (199)
T PRK09456 66 ALSLSYEQFAHGWQAVF--------VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRA--AADHIYLSQ 135 (199)
T ss_pred CCCCCHHHHHHHHHHHH--------hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHH--hcCEEEEec
Confidence 66555454444433322 25789999999999999999999999988766554444 46777 899999999
Q ss_pred ccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcC
Q 039449 167 LEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDR 219 (253)
Q Consensus 167 ~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~ 219 (253)
+.+..||+|+.|..++++++ ++|+++++|||+. .|+.+|+++|++++++.+
T Consensus 136 ~~~~~KP~p~~~~~~~~~~~-~~p~~~l~vgD~~-~di~aA~~aG~~~i~~~~ 186 (199)
T PRK09456 136 DLGMRKPEARIYQHVLQAEG-FSAADAVFFDDNA-DNIEAANALGITSILVTD 186 (199)
T ss_pred ccCCCCCCHHHHHHHHHHcC-CChhHeEEeCCCH-HHHHHHHHcCCEEEEecC
Confidence 99999999999999999999 9999999999999 899999999999999984
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-24 Score=159.72 Aligned_cols=100 Identities=36% Similarity=0.622 Sum_probs=92.9
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCc
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEE 192 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 192 (253)
.+++||+.++|+.|++.|++++++||+.... ......+|+.. +|+.++++++.+..||+|+.|..++++++ +++++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~--~f~~i~~~~~~~~~KP~~~~~~~~~~~~~-~~~~~ 159 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRD--LFDVVIFSGDVGRGKPDPDIYLLALKKLG-LKPEE 159 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHH--HCCEEEEcCCCCCCCCCHHHHHHHHHHcC-CCcce
Confidence 4789999999999999999999999999887 66666699988 99999999999999999999999999999 99999
Q ss_pred eEEEcCCcccchhhhhhcCCeEEEE
Q 039449 193 ALHIGDSFRKDYVPAKSVGMHALLV 217 (253)
Q Consensus 193 ~~~iGD~~~~Di~~a~~~G~~~i~~ 217 (253)
+++|||++ .|+.+|+++|+.+|++
T Consensus 160 ~~~vgD~~-~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 160 CLFVDDSP-AGIEAAKAAGMHTVLV 183 (183)
T ss_pred EEEEcCCH-HHHHHHHHcCCEEEeC
Confidence 99999999 8999999999999975
|
HAD subfamilies caused by an overly broad single model. |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.8e-24 Score=157.24 Aligned_cols=191 Identities=12% Similarity=0.106 Sum_probs=124.6
Q ss_pred ceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHHH
Q 039449 7 LRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFVR 86 (253)
Q Consensus 7 ~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (253)
+|+|+||+||||+|+. ..+..+++++|++. +++...+ |...... +.. .
T Consensus 2 ~k~viFDlDGTLiD~~----~~~~~~~~~~g~~~---~~~~~~~--------------g~~~~~~--------~~~---~ 49 (197)
T PHA02597 2 KPTILTDVDGVLLSWQ----SGLPYFAQKYNIPT---DHILKMI--------------QDERFRD--------PGE---L 49 (197)
T ss_pred CcEEEEecCCceEchh----hccHHHHHhcCCCH---HHHHHHH--------------hHhhhcC--------HHH---H
Confidence 7999999999999955 44567778888742 2222111 1100000 111 1
Q ss_pred cCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCc--ceeEeee
Q 039449 87 AGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGT--EWDFGVF 164 (253)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~--~f~~~~~ 164 (253)
++ .+.+...+.+..+..... .....++||+.++|+.|++. ++++++||.........++.+++..+. +|+.++.
T Consensus 50 ~~--~~~~~~~~~~~~~~~~~~-~~~~~~~pG~~e~L~~L~~~-~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~ 125 (197)
T PHA02597 50 FG--CDQELAKKLIEKYNNSDF-IRYLSAYDDALDVINKLKED-YDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLM 125 (197)
T ss_pred hc--ccHHHHHHHhhhhhHHHH-HHhccCCCCHHHHHHHHHhc-CCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEE
Confidence 11 122333333333332111 11246899999999999987 467888988776666567777776511 4455555
Q ss_pred ccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhc--CCeEEEEcCCCCCChhhhhhcCCcccCCHHHH
Q 039449 165 SGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSV--GMHALLVDRFKTPDAKEWRKSGAIVLPDLVAV 242 (253)
Q Consensus 165 ~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~--G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el 242 (253)
++. .||+|+.+..++++++ +++++||||+. +|+.+|+++ |+++|++++ +.. .. .+...+.+.|+.|+
T Consensus 126 ~~~---~~~kp~~~~~a~~~~~---~~~~v~vgDs~-~di~aA~~a~~Gi~~i~~~~-~~~--~~-~~~~~~~~~~~~~~ 194 (197)
T PHA02597 126 CGH---DESKEKLFIKAKEKYG---DRVVCFVDDLA-HNLDAAHEALSQLPVIHMLR-GER--DH-IPKLAHRVKSWNDI 194 (197)
T ss_pred ecc---CcccHHHHHHHHHHhC---CCcEEEeCCCH-HHHHHHHHHHcCCcEEEecc-hhh--cc-ccchhhhhccHHHH
Confidence 554 2678899999999998 78899999999 899999999 999999984 422 11 12344899999998
Q ss_pred HH
Q 039449 243 KE 244 (253)
Q Consensus 243 ~~ 244 (253)
.+
T Consensus 195 ~~ 196 (197)
T PHA02597 195 EN 196 (197)
T ss_pred hc
Confidence 64
|
2 hypothetical protein; Provisional |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.8e-23 Score=157.68 Aligned_cols=197 Identities=16% Similarity=0.236 Sum_probs=131.1
Q ss_pred ccCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHH
Q 039449 4 LSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDS 83 (253)
Q Consensus 4 ~~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (253)
++++++++||+||||+++. .+..+++.+|.... .... .... ..+.++..+..+..
T Consensus 11 ~~~~k~iiFD~DGTL~~~~-----~~~~l~~~~g~~~~-~~~~-------~~~~--------~~g~~~~~~~~~~~---- 65 (219)
T TIGR00338 11 LRSKKLVVFDMDSTLINAE-----TIDEIAKIAGVEEE-VSEI-------TERA--------MRGELDFKASLRER---- 65 (219)
T ss_pred hccCCEEEEeCcccCCCch-----HHHHHHHHhCCHHH-HHHH-------HHHH--------HcCCCCHHHHHHHH----
Confidence 4668999999999999963 45566667765311 1111 0100 01223333332222
Q ss_pred HHHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEee
Q 039449 84 FVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGV 163 (253)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~ 163 (253)
+..+. ....+ .+..... ...++||+.++|+.|+++|++++|+||+....++.+++.+|+.. +|...+
T Consensus 66 ~~~~~-~~~~~----~~~~~~~------~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~--~~~~~~ 132 (219)
T TIGR00338 66 VALLK-GLPVE----LLKEVRE------NLPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDA--AFANRL 132 (219)
T ss_pred HHHhC-CCCHH----HHHHHHh------cCCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc--eEeeEE
Confidence 22221 11222 2222221 13688999999999999999999999999999999999999987 665432
Q ss_pred ec----------cccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCC
Q 039449 164 FS----------GLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGA 233 (253)
Q Consensus 164 ~~----------~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~ 233 (253)
.. ......+|++..++.++++++ +++++|++|||+. +|+.+|+++|+..++ + + .+.+.....
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~-~~~~~~i~iGDs~-~Di~aa~~ag~~i~~-~--~---~~~~~~~a~ 204 (219)
T TIGR00338 133 EVEDGKLTGLVEGPIVDASYKGKTLLILLRKEG-ISPENTVAVGDGA-NDLSMIKAAGLGIAF-N--A---KPKLQQKAD 204 (219)
T ss_pred EEECCEEEEEecCcccCCcccHHHHHHHHHHcC-CCHHHEEEEECCH-HHHHHHHhCCCeEEe-C--C---CHHHHHhch
Confidence 21 112234678999999999999 9999999999999 999999999998654 3 1 233344556
Q ss_pred cccC--CHHHHHHHH
Q 039449 234 IVLP--DLVAVKEFL 246 (253)
Q Consensus 234 ~~i~--~l~el~~~l 246 (253)
+++. ++.++.++|
T Consensus 205 ~~i~~~~~~~~~~~~ 219 (219)
T TIGR00338 205 ICINKKDLTDILPLL 219 (219)
T ss_pred hccCCCCHHHHHhhC
Confidence 6655 778887764
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.9e-23 Score=154.39 Aligned_cols=203 Identities=12% Similarity=0.074 Sum_probs=134.7
Q ss_pred ccCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHH
Q 039449 4 LSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDS 83 (253)
Q Consensus 4 ~~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (253)
.+++|+|+||+||||+++ ..+..+++.+|... ...+....+ .++.++..+.++ ..
T Consensus 9 ~~~~k~viFDfDGTL~~~-----~~~~~~~~~~g~~~-~~~~~~~~~---------------~~g~~~~~~~~~----~~ 63 (224)
T PLN02954 9 WRSADAVCFDVDSTVCVD-----EGIDELAEFCGAGE-AVAEWTAKA---------------MGGSVPFEEALA----AR 63 (224)
T ss_pred HccCCEEEEeCCCcccch-----HHHHHHHHHcCChH-HHHHHHHHH---------------HCCCCCHHHHHH----HH
Confidence 356899999999999995 44577788888642 112221110 122334333322 22
Q ss_pred HHHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEee
Q 039449 84 FVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGV 163 (253)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~ 163 (253)
+.... ...+.+ ..++... ...++||+.++|+.|+++|++++|+|++....++.+++.+|+....+|...+
T Consensus 64 ~~~~~--~~~~~~----~~~~~~~----~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~ 133 (224)
T PLN02954 64 LSLFK--PSLSQV----EEFLEKR----PPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQI 133 (224)
T ss_pred HHHcC--CCHHHH----HHHHHHc----cCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEE
Confidence 22222 122222 2222221 1368999999999999999999999999999999999999997322554322
Q ss_pred eccc------------cCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhc
Q 039449 164 FSGL------------EGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKS 231 (253)
Q Consensus 164 ~~~~------------~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~ 231 (253)
.... ....++|++.++.+++.++ . +++++|||+. +|+.+++.+|+.++...+ +....+.....
T Consensus 134 ~~~~~g~~~g~~~~~~~~~~~~K~~~i~~~~~~~~-~--~~~i~iGDs~-~Di~aa~~~~~~~~~~~~-~~~~~~~~~~~ 208 (224)
T PLN02954 134 LFGDSGEYAGFDENEPTSRSGGKAEAVQHIKKKHG-Y--KTMVMIGDGA-TDLEARKPGGADLFIGYG-GVQVREAVAAK 208 (224)
T ss_pred EEcCCCcEECccCCCcccCCccHHHHHHHHHHHcC-C--CceEEEeCCH-HHHHhhhcCCCCEEEecC-CCccCHHHHhc
Confidence 2111 1234678899999998888 5 6899999999 999999998988766543 22222333344
Q ss_pred CCcccCCHHHHHHHH
Q 039449 232 GAIVLPDLVAVKEFL 246 (253)
Q Consensus 232 ~~~~i~~l~el~~~l 246 (253)
.+++++++.+|.+++
T Consensus 209 ~~~~i~~~~el~~~~ 223 (224)
T PLN02954 209 ADWFVTDFQDLIEVL 223 (224)
T ss_pred CCEEECCHHHHHHhh
Confidence 678999999998765
|
|
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-23 Score=149.21 Aligned_cols=154 Identities=27% Similarity=0.415 Sum_probs=115.6
Q ss_pred EEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHHHcC
Q 039449 9 CITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFVRAG 88 (253)
Q Consensus 9 ~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (253)
+|+||+||||+|+...+..++...++++|. ..+.+... .|. ....+ .....
T Consensus 1 ~iifD~DGTL~d~~~~~~~~~~~~~~~~~~---~~~~~~~~--------------~g~----~~~~~-----~~~~~--- 51 (154)
T TIGR01549 1 AILFDIDGTLVDSSFAIRRAFEETLEEFGE---DFQALKAL--------------RGL----AEELL-----YRIAT--- 51 (154)
T ss_pred CeEecCCCcccccHHHHHHHHHHHHHHhcc---cHHHHHHH--------------Hcc----ChHHH-----HHHHH---
Confidence 489999999999988888899999998874 22211110 111 10111 11010
Q ss_pred CCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeecccc
Q 039449 89 YDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLE 168 (253)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~ 168 (253)
..+++.. + ......+||+.++|+.|+++|++++++||+....+...++.+ +.. +|+.++.++..
T Consensus 52 ---~~~~~~~-----~-----~~~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~--~f~~i~~~~~~ 115 (154)
T TIGR01549 52 ---SFEELLG-----Y-----DAEEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGD--YFDLILGSDEF 115 (154)
T ss_pred ---HHHHHhC-----c-----chhheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHh--cCcEEEecCCC
Confidence 0111111 1 112356799999999999999999999999999999888887 776 88888888877
Q ss_pred CccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcC
Q 039449 169 GVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVG 211 (253)
Q Consensus 169 ~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G 211 (253)
+ .||+|+.+..++++++ +++ +|++|||+. +|+.+|+++|
T Consensus 116 ~-~Kp~~~~~~~~~~~~~-~~~-~~l~iGDs~-~Di~aa~~aG 154 (154)
T TIGR01549 116 G-AKPEPEIFLAALESLG-LPP-EVLHVGDNL-NDIEGARNAG 154 (154)
T ss_pred C-CCcCHHHHHHHHHHcC-CCC-CEEEEeCCH-HHHHHHHHcc
Confidence 7 9999999999999999 999 999999998 8999999987
|
HAD subfamilies caused by an overly broad single model. |
| >KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.4e-23 Score=149.68 Aligned_cols=208 Identities=17% Similarity=0.216 Sum_probs=159.1
Q ss_pred ccCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHH
Q 039449 4 LSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDS 83 (253)
Q Consensus 4 ~~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (253)
...+.+++||+||||+|+...+.++++..+.++|... ++..... ..|. ...+. .+..
T Consensus 7 ~~~~~~~lfD~dG~lvdte~~y~~~~~~~~~~ygk~~-~~~~~~~--------------~mG~----~~~ea----a~~~ 63 (222)
T KOG2914|consen 7 SLKVSACLFDMDGTLVDTEDLYTEAWQELLDRYGKPY-PWDVKVK--------------SMGK----RTSEA----ARLF 63 (222)
T ss_pred ccceeeEEEecCCcEEecHHHHHHHHHHHHHHcCCCC-hHHHHHH--------------HcCC----CHHHH----HHHH
Confidence 4568899999999999999999999999999999843 3222111 1222 22222 3333
Q ss_pred HHHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcC-CCCCcceeEe
Q 039449 84 FVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALG-VNQGTEWDFG 162 (253)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~g-l~~~~~f~~~ 162 (253)
+.....+.+.+++.....+........ ..+.||+..+++.|+.+|++++++|+.+....+.++++++ +.. .|..+
T Consensus 64 ~~~~~dp~s~ee~~~e~~~~~~~~~~~--~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~--~f~~~ 139 (222)
T KOG2914|consen 64 VKKLPDPVSREEFNKEEEEILDRLFMN--SILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFK--NFSHV 139 (222)
T ss_pred HhhcCCCCCHHHHHHHHHHHHHHhccc--cccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHH--hcCCC
Confidence 456667788888887777766665533 4778999999999999999999999999999888888887 555 67766
Q ss_pred ee--ccccCccCCCHHHHHHHHHHhCCCCC-CceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCH
Q 039449 163 VF--SGLEGVEKPDPRIYEIALERAGNIAP-EEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDL 239 (253)
Q Consensus 163 ~~--~~~~~~~kp~~~~~~~~~~~~~~~~~-~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l 239 (253)
+. ..++..+||+|++|..++++++ ..+ +.|++++|++ ..+++|+.+|+++|+++.+... ..+......+++++
T Consensus 140 v~~d~~~v~~gKP~Pdi~l~A~~~l~-~~~~~k~lVfeds~-~Gv~aa~aagm~vi~v~~~~~~--~~~~~~~~~~~~~~ 215 (222)
T KOG2914|consen 140 VLGDDPEVKNGKPDPDIYLKAAKRLG-VPPPSKCLVFEDSP-VGVQAAKAAGMQVVGVATPDLS--NLFSAGATLILESL 215 (222)
T ss_pred eecCCccccCCCCCchHHHHHHHhcC-CCCccceEEECCCH-HHHHHHHhcCCeEEEecCCCcc--hhhhhccceecccc
Confidence 66 4556777999999999999999 877 9999999999 8999999999999999852222 23334455666666
Q ss_pred HHH
Q 039449 240 VAV 242 (253)
Q Consensus 240 ~el 242 (253)
.+.
T Consensus 216 ~~~ 218 (222)
T KOG2914|consen 216 EDF 218 (222)
T ss_pred ccc
Confidence 543
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.1e-23 Score=152.27 Aligned_cols=129 Identities=21% Similarity=0.192 Sum_probs=101.1
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcc---------------hhhhhhhhcCCCCCcceeEeeecc-----ccCccCC
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYR---------------YQDVILPALGVNQGTEWDFGVFSG-----LEGVEKP 173 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~---------------~~~~~l~~~gl~~~~~f~~~~~~~-----~~~~~kp 173 (253)
.++||+.++|++|+++|++++|+||.... .....++.+|+ .|+.++.+. ..+..||
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~----~f~~i~~~~~~~~~~~~~~KP 104 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG----RLDGIYYCPHHPEDGCDCRKP 104 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC----ccceEEECCCCCCCCCcCCCC
Confidence 77899999999999999999999998731 12334555555 355555432 3466899
Q ss_pred CHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcC--CcccCCHHHHHHHHhhh
Q 039449 174 DPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSG--AIVLPDLVAVKEFLTSE 249 (253)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~--~~~i~~l~el~~~l~~~ 249 (253)
+|++|..+++.++ ++++++++|||+. +|+.+|+++|+.++++. ++..........+ +++++++.++.+++.+.
T Consensus 105 ~p~~~~~~~~~l~-~~~~~~~~VgDs~-~Di~~A~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ii~~l~el~~~l~~~ 179 (181)
T PRK08942 105 KPGMLLSIAERLN-IDLAGSPMVGDSL-RDLQAAAAAGVTPVLVR-TGKGVTTLAEGAAPGTWVLDSLADLPQALKKQ 179 (181)
T ss_pred CHHHHHHHHHHcC-CChhhEEEEeCCH-HHHHHHHHCCCeEEEEc-CCCCchhhhcccCCCceeecCHHHHHHHHHhh
Confidence 9999999999999 9999999999999 89999999999999997 3433322222334 68999999999988754
|
|
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.7e-24 Score=153.62 Aligned_cols=175 Identities=22% Similarity=0.270 Sum_probs=122.6
Q ss_pred EEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHHHcC
Q 039449 9 CITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFVRAG 88 (253)
Q Consensus 9 ~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (253)
+|+||+||||+|+...+..++..++.+.+.....+.. ..+...+... ..| ......+.....+....+.++
T Consensus 1 ~viFD~DGTL~D~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-----~~~--~~~~~~~~~~~~~~~~~~~~g 71 (175)
T TIGR01493 1 AMVFDVYGTLVDVHGGVRACLAAIAPEGGAFSDLWRA--KQQEYSWRRS-----LMG--DRRAFPEDTVRALRYIADRLG 71 (175)
T ss_pred CeEEecCCcCcccHHHHHHHHHHhhhhhhHHHHHHHH--HHHHHHHHHH-----Hhc--CcCCHHHHHHHHHHHHHHHcC
Confidence 5899999999999987777777666553321000000 0011111110 011 122223333445666777788
Q ss_pred CCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeecccc
Q 039449 89 YDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLE 168 (253)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~ 168 (253)
.+.+.+.. ..+...+. .+.++||+.++|+ +++|+||++...++..++++|+.. +|+.++++++.
T Consensus 72 ~~~~~~~~-~~~~~~~~------~~~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~--~fd~v~~~~~~ 135 (175)
T TIGR01493 72 LDAEPKYG-ERLRDAYK------NLPPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPW--YFDRAFSVDTV 135 (175)
T ss_pred CCCCHHHH-HHHHHHHh------cCCCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHH--HHhhhccHhhc
Confidence 76555422 22222221 2478999999998 378999999999999999999988 99998888888
Q ss_pred CccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhc
Q 039449 169 GVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSV 210 (253)
Q Consensus 169 ~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~ 210 (253)
+..||+|+.|..+++++| ++|++|+||||+. +|+.+|+++
T Consensus 136 ~~~KP~p~~f~~~~~~~~-~~p~~~l~vgD~~-~Di~~A~~~ 175 (175)
T TIGR01493 136 RAYKPDPVVYELVFDTVG-LPPDRVLMVAAHQ-WDLIGARKF 175 (175)
T ss_pred CCCCCCHHHHHHHHHHHC-CCHHHeEeEecCh-hhHHHHhcC
Confidence 999999999999999999 9999999999999 899999864
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.7e-23 Score=147.89 Aligned_cols=130 Identities=17% Similarity=0.192 Sum_probs=99.7
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcch--------hhhhhhhcCCCCCcceeEee-eccccCccCCCHHHHHHHHHH
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRY--------QDVILPALGVNQGTEWDFGV-FSGLEGVEKPDPRIYEIALER 184 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~--------~~~~l~~~gl~~~~~f~~~~-~~~~~~~~kp~~~~~~~~~~~ 184 (253)
.++||+.++|++|+++|++++|+||..... ....++.+|+.. +|.... .++..+..||+|+.|..++++
T Consensus 28 ~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~--~~~~~~~~~~~~~~~KP~p~~~~~~~~~ 105 (173)
T PRK06769 28 TLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDD--IYLCPHKHGDGCECRKPSTGMLLQAAEK 105 (173)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCE--EEECcCCCCCCCCCCCCCHHHHHHHHHH
Confidence 678999999999999999999999987421 223356667665 443222 234456789999999999999
Q ss_pred hCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCC-CCCC----hhhhh-hcCCcccCCHHHHHHHHh
Q 039449 185 AGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRF-KTPD----AKEWR-KSGAIVLPDLVAVKEFLT 247 (253)
Q Consensus 185 ~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~-~~~~----~~~~~-~~~~~~i~~l~el~~~l~ 247 (253)
++ +++++|+||||++ +|+.+|+++|+.+|++.+. +... .+.+. ..++++++++.|+..+|.
T Consensus 106 l~-~~p~~~i~IGD~~-~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el~~~l~ 172 (173)
T PRK06769 106 HG-LDLTQCAVIGDRW-TDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDAVNWIL 172 (173)
T ss_pred cC-CCHHHeEEEcCCH-HHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchhhCHHHHHHHHh
Confidence 99 9999999999999 8999999999999999842 2211 12222 235589999999988764
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.8e-22 Score=145.48 Aligned_cols=123 Identities=19% Similarity=0.210 Sum_probs=95.4
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcc---------------hhhhhhhhcCCCCCcceeEeeec-----------cc
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYR---------------YQDVILPALGVNQGTEWDFGVFS-----------GL 167 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~---------------~~~~~l~~~gl~~~~~f~~~~~~-----------~~ 167 (253)
.++||+.++|++|+++|++++++||.+.. .....+...++. |+.++.+ +.
T Consensus 26 ~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~i~~~~~~~~~~~~~~~~ 101 (176)
T TIGR00213 26 EFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD----LDGIYYCPHHPEGVEEFRQV 101 (176)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC----ccEEEECCCCCcccccccCC
Confidence 78899999999999999999999999852 222345555543 3444433 23
Q ss_pred cCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeE-EEEcCCCCCChhhhhhcCCcccCCHHHHH
Q 039449 168 EGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHA-LLVDRFKTPDAKEWRKSGAIVLPDLVAVK 243 (253)
Q Consensus 168 ~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~-i~~~~~~~~~~~~~~~~~~~~i~~l~el~ 243 (253)
....||+|++|..++++++ +++++++||||+. +|+++|+++|+++ +++. ++..........+++++.++.||.
T Consensus 102 ~~~~KP~p~~~~~a~~~~~-~~~~~~v~VGDs~-~Di~aA~~aG~~~~i~v~-~g~~~~~~~~~~ad~~i~~~~el~ 175 (176)
T TIGR00213 102 CDCRKPKPGMLLQARKELH-IDMAQSYMVGDKL-EDMQAGVAAKVKTNVLVR-TGKPITPEAENIADWVLNSLADLP 175 (176)
T ss_pred CCCCCCCHHHHHHHHHHcC-cChhhEEEEcCCH-HHHHHHHHCCCcEEEEEe-cCCcccccccccCCEEeccHHHhh
Confidence 4467999999999999999 9999999999999 8999999999998 7888 454332222233678999999985
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.6e-21 Score=145.24 Aligned_cols=102 Identities=18% Similarity=0.202 Sum_probs=87.8
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccC----------CCHHHHHHHH
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEK----------PDPRIYEIAL 182 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~k----------p~~~~~~~~~ 182 (253)
..++||+.++|+.|+++|++++|+|++....++.+++.+|+.. +|...+.+.+.+..+ ++++.+..++
T Consensus 79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~--~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~ 156 (201)
T TIGR01491 79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDY--VYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLK 156 (201)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCe--EEEEEEEEcCCCeEecceeeEEccccHHHHHHHHH
Confidence 3789999999999999999999999999999999999999987 776666655444333 3446888999
Q ss_pred HHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEc
Q 039449 183 ERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVD 218 (253)
Q Consensus 183 ~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~ 218 (253)
++++ ++++++++|||+. +|+.+++.+|+++++-+
T Consensus 157 ~~~~-~~~~~~i~iGDs~-~D~~~a~~ag~~~a~~~ 190 (201)
T TIGR01491 157 RELN-PSLTETVAVGDSK-NDLPMFEVADISISLGD 190 (201)
T ss_pred HHhC-CCHHHEEEEcCCH-hHHHHHHhcCCeEEECC
Confidence 9999 9999999999999 99999999999887755
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.4e-21 Score=143.12 Aligned_cols=123 Identities=20% Similarity=0.201 Sum_probs=97.1
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhc---CCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCC
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPAL---GVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIA 189 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~---gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~ 189 (253)
..++||+.++|++|+++|++++|+||++...++..+++. ++.. +|+..+. ...+ .||+|+.|..++++++ ++
T Consensus 94 ~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~--~f~~~fd-~~~g-~KP~p~~y~~i~~~lg-v~ 168 (220)
T TIGR01691 94 SHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTP--YFSGYFD-TTVG-LKTEAQSYVKIAGQLG-SP 168 (220)
T ss_pred cCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhh--hcceEEE-eCcc-cCCCHHHHHHHHHHhC-cC
Confidence 478999999999999999999999999998888777775 5655 6665442 2333 6999999999999999 99
Q ss_pred CCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHH
Q 039449 190 PEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVA 241 (253)
Q Consensus 190 ~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~e 241 (253)
+++++||||+. .|+.+|+++|+.++++.+++......-......++.|+++
T Consensus 169 p~e~lfVgDs~-~Di~AA~~AG~~ti~v~r~g~~~~~~~~~~~~~~~~~~~~ 219 (220)
T TIGR01691 169 PREILFLSDII-NELDAARKAGLHTGQLVRPGNDPVVDPSFPVYPQFPDLNA 219 (220)
T ss_pred hhHEEEEeCCH-HHHHHHHHcCCEEEEEECCCCCCCCcccCCCCCeecCccc
Confidence 99999999999 8999999999999999976633221110111446666654
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.1e-22 Score=140.27 Aligned_cols=104 Identities=25% Similarity=0.323 Sum_probs=85.1
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCc---------------chhhhhhhhcCCCCCcceeEeee-ccccCccCCCHHH
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEY---------------RYQDVILPALGVNQGTEWDFGVF-SGLEGVEKPDPRI 177 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~---------------~~~~~~l~~~gl~~~~~f~~~~~-~~~~~~~kp~~~~ 177 (253)
+++||+.++|++|+++|++++|+||... ..+...++.+|+....+|..... +...+..||+|++
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~KP~~~~ 106 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNCSCRKPKPGL 106 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCCCCCCCCHHH
Confidence 6789999999999999999999999874 34566778888863111221111 2344567999999
Q ss_pred HHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcC
Q 039449 178 YEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDR 219 (253)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~ 219 (253)
+..++++++ +++++|++|||+. .|+++|+++|+++|++++
T Consensus 107 ~~~~~~~~~-~~~~e~i~IGDs~-~Di~~A~~~Gi~~v~i~~ 146 (147)
T TIGR01656 107 ILEALKRLG-VDASRSLVVGDRL-RDLQAARNAGLAAVLLVD 146 (147)
T ss_pred HHHHHHHcC-CChHHEEEEcCCH-HHHHHHHHCCCCEEEecC
Confidence 999999999 9999999999998 899999999999999974
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.7e-21 Score=144.70 Aligned_cols=132 Identities=13% Similarity=0.068 Sum_probs=97.2
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcce--eEeeeccccCccCCCHHH----------HHH
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEW--DFGVFSGLEGVEKPDPRI----------YEI 180 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f--~~~~~~~~~~~~kp~~~~----------~~~ 180 (253)
..++||+.++|++|+++|++++|+|++....++.+++.+ +.....+ +..+..+.....||.|.. ...
T Consensus 73 ~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~ 151 (219)
T PRK09552 73 AEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPS 151 (219)
T ss_pred CCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHH
Confidence 478999999999999999999999999999999999887 6431122 223334444455776643 357
Q ss_pred HHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHHHHHHhhhh
Q 039449 181 ALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKEFLTSEI 250 (253)
Q Consensus 181 ~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~~~l~~~~ 250 (253)
++++++ .++++|++|||+. +|+.+|+++|+..+ .+ ...........+.+.++++.|+...|++..
T Consensus 152 ~l~~~~-~~~~~~i~iGDs~-~Di~aa~~Ag~~~a--~~-~l~~~~~~~~~~~~~~~~f~ei~~~l~~~~ 216 (219)
T PRK09552 152 LIRKLS-DTNDFHIVIGDSI-TDLEAAKQADKVFA--RD-FLITKCEELGIPYTPFETFHDVQTELKHLL 216 (219)
T ss_pred HHHHhc-cCCCCEEEEeCCH-HHHHHHHHCCccee--HH-HHHHHHHHcCCCccccCCHHHHHHHHHHHh
Confidence 888999 9999999999999 99999999999444 31 101111112234578899999999988764
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=99.87 E-value=4e-21 Score=133.14 Aligned_cols=97 Identities=31% Similarity=0.421 Sum_probs=85.5
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCC--------cchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHh
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAE--------YRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERA 185 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~--------~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~ 185 (253)
.++|++.++|++|++.|++++++||+. ...+...++.+|+.. +..+++. +..||+++.|+.+++++
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~----~~~~~~~--~~~KP~~~~~~~~~~~~ 98 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPI----DVLYACP--HCRKPKPGMFLEALKRF 98 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCE----EEEEECC--CCCCCChHHHHHHHHHc
Confidence 678999999999999999999999998 667888899998853 3333444 56799999999999999
Q ss_pred -CCCCCCceEEEcC-CcccchhhhhhcCCeEEEEc
Q 039449 186 -GNIAPEEALHIGD-SFRKDYVPAKSVGMHALLVD 218 (253)
Q Consensus 186 -~~~~~~~~~~iGD-~~~~Di~~a~~~G~~~i~~~ 218 (253)
+ +++++++|||| +. +|+.+|+++|+.+|+++
T Consensus 99 ~~-~~~~~~v~IGD~~~-~Di~~A~~~Gi~~i~~~ 131 (132)
T TIGR01662 99 NE-IDPEESVYVGDQDL-TDLQAAKRAGLAFILVA 131 (132)
T ss_pred CC-CChhheEEEcCCCc-ccHHHHHHCCCeEEEee
Confidence 8 99999999999 68 89999999999999986
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.8e-21 Score=141.85 Aligned_cols=128 Identities=16% Similarity=0.193 Sum_probs=95.8
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeecccc----CccCCCHHHHHHHHHHhCCC
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLE----GVEKPDPRIYEIALERAGNI 188 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~----~~~kp~~~~~~~~~~~~~~~ 188 (253)
..++||+.++|..|+++ ++++++|++....++..++.+|+.. +|...+..... +..+++|.....+++.++ .
T Consensus 67 ~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~--~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~-~ 142 (205)
T PRK13582 67 LDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPT--LFCHSLEVDEDGMITGYDLRQPDGKRQAVKALK-S 142 (205)
T ss_pred CCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCch--hhcceEEECCCCeEECccccccchHHHHHHHHH-H
Confidence 37799999999999999 9999999999999999999999987 66554433221 222334444556677777 7
Q ss_pred CCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCC-cccCCHHHHHHHHhhhh
Q 039449 189 APEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGA-IVLPDLVAVKEFLTSEI 250 (253)
Q Consensus 189 ~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~-~~i~~l~el~~~l~~~~ 250 (253)
.++++++|||+. +|+.+++.+|+... +. +. .......+. .+++++.||..++.+..
T Consensus 143 ~~~~~v~iGDs~-~D~~~~~aa~~~v~-~~-~~---~~~~~~~~~~~~~~~~~el~~~l~~~~ 199 (205)
T PRK13582 143 LGYRVIAAGDSY-NDTTMLGEADAGIL-FR-PP---ANVIAEFPQFPAVHTYDELLAAIDKAS 199 (205)
T ss_pred hCCeEEEEeCCH-HHHHHHHhCCCCEE-EC-CC---HHHHHhCCcccccCCHHHHHHHHHHHH
Confidence 778999999999 99999999998654 33 11 122222344 48999999999988755
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.2e-20 Score=144.93 Aligned_cols=127 Identities=14% Similarity=0.135 Sum_probs=100.2
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEee-------ecc---ccCccCCCHHHHHHHH
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGV-------FSG---LEGVEKPDPRIYEIAL 182 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~-------~~~---~~~~~kp~~~~~~~~~ 182 (253)
.+++||+.++++.|++.|++++|+|++....++...+.+|++. .+...+ +.. .....+||++.++.++
T Consensus 180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~--~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la 257 (322)
T PRK11133 180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDA--AVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLA 257 (322)
T ss_pred CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCe--EEEeEEEEECCEEEeEecCccCCcccHHHHHHHHH
Confidence 4789999999999999999999999999988888899999875 333211 111 2224589999999999
Q ss_pred HHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCccc--CCHHHHHHHHhhh
Q 039449 183 ERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVL--PDLVAVKEFLTSE 249 (253)
Q Consensus 183 ~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i--~~l~el~~~l~~~ 249 (253)
+++| +++++|++|||+. ||+.|++.+|+..++ +. .+.+.+..++++ .+++.++.++...
T Consensus 258 ~~lg-i~~~qtIaVGDg~-NDl~m~~~AGlgiA~-nA-----kp~Vk~~Ad~~i~~~~l~~~l~~~~~~ 318 (322)
T PRK11133 258 QEYE-IPLAQTVAIGDGA-NDLPMIKAAGLGIAY-HA-----KPKVNEQAQVTIRHADLMGVLCILSGS 318 (322)
T ss_pred HHcC-CChhhEEEEECCH-HHHHHHHHCCCeEEe-CC-----CHHHHhhCCEEecCcCHHHHHHHhccc
Confidence 9999 9999999999999 999999999999887 41 233344455444 4788888777543
|
|
| >KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.8e-20 Score=131.07 Aligned_cols=182 Identities=20% Similarity=0.269 Sum_probs=134.9
Q ss_pred cCceEEEEecCCceeccCCCHHHHHHHH-----HHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHH
Q 039449 5 SRLRCITVDVTGTLLAYKGELGDYYCMA-----AKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTC 79 (253)
Q Consensus 5 ~~~k~i~fD~DGTL~~~~~~~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (253)
.++++++||+|+||++....+..+.+.- ..++|+...............|.-
T Consensus 13 ~~~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG~----------------------- 69 (244)
T KOG3109|consen 13 PNYKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYGL----------------------- 69 (244)
T ss_pred ccceEEEEecccccccCchhHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHhH-----------------------
Confidence 4689999999999999888777776632 345688765554444333222211
Q ss_pred HHHHHHHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcce
Q 039449 80 VRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEW 159 (253)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f 159 (253)
.-+.+...+...+.++..+ +.........++|.+..+.+|-.|+.++ .+++||+.+..+.+.++.+|+++ .|
T Consensus 70 t~aGL~~~~~~~d~deY~~----~V~~~LPlq~LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~LGieD--cF 141 (244)
T KOG3109|consen 70 TMAGLKAVGYIFDADEYHR----FVHGRLPLQDLKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKLGIED--CF 141 (244)
T ss_pred HHHHHHHhcccCCHHHHHH----HhhccCcHhhcCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHhChHH--hc
Confidence 1122333333334444433 3333333233577778889998888774 78999999999999999999999 99
Q ss_pred eEeeeccccCc------cCCCHHHHHHHHHHhCCCC-CCceEEEcCCcccchhhhhhcCCeEEEEcC
Q 039449 160 DFGVFSGLEGV------EKPDPRIYEIALERAGNIA-PEEALHIGDSFRKDYVPAKSVGMHALLVDR 219 (253)
Q Consensus 160 ~~~~~~~~~~~------~kp~~~~~~~~~~~~~~~~-~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~ 219 (253)
+.++.++.... -||.+++|+.+++..| ++ |++++||+||. ++|..|++.|++++++..
T Consensus 142 egii~~e~~np~~~~~vcKP~~~afE~a~k~ag-i~~p~~t~FfDDS~-~NI~~ak~vGl~tvlv~~ 206 (244)
T KOG3109|consen 142 EGIICFETLNPIEKTVVCKPSEEAFEKAMKVAG-IDSPRNTYFFDDSE-RNIQTAKEVGLKTVLVGR 206 (244)
T ss_pred cceeEeeccCCCCCceeecCCHHHHHHHHHHhC-CCCcCceEEEcCch-hhHHHHHhccceeEEEEe
Confidence 99888776652 2999999999999999 87 99999999999 899999999999999984
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.7e-21 Score=134.33 Aligned_cols=101 Identities=19% Similarity=0.222 Sum_probs=87.8
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCC---------------cchhhhhhhhcCCCCCcceeEeeec-----cccCccC
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAE---------------YRYQDVILPALGVNQGTEWDFGVFS-----GLEGVEK 172 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~---------------~~~~~~~l~~~gl~~~~~f~~~~~~-----~~~~~~k 172 (253)
+.++||+.++|++|+++|++++|+||.+ ...+...++.+|+. |+.++++ ++.+..|
T Consensus 28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~----fd~ii~~~~~~~~~~~~~K 103 (161)
T TIGR01261 28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII----FDDVLICPHFPDDNCDCRK 103 (161)
T ss_pred eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc----eeEEEECCCCCCCCCCCCC
Confidence 3789999999999999999999999974 23456678888884 5655543 6677889
Q ss_pred CCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcC
Q 039449 173 PDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDR 219 (253)
Q Consensus 173 p~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~ 219 (253)
|+++.+..++++++ +++++++||||+. +|+.+|+++|++++++.+
T Consensus 104 P~~~~~~~~~~~~~-~~~~e~l~IGD~~-~Di~~A~~aGi~~i~~~~ 148 (161)
T TIGR01261 104 PKIKLLEPYLKKNL-IDKARSYVIGDRE-TDMQLAENLGIRGIQYDE 148 (161)
T ss_pred CCHHHHHHHHHHcC-CCHHHeEEEeCCH-HHHHHHHHCCCeEEEECh
Confidence 99999999999999 9999999999999 899999999999999984
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.8e-21 Score=138.69 Aligned_cols=103 Identities=13% Similarity=0.083 Sum_probs=92.8
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCC-CcchhhhhhhhcCCC---------CCcceeEeeeccccCccCCCHHHHHHHH
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNA-EYRYQDVILPALGVN---------QGTEWDFGVFSGLEGVEKPDPRIYEIAL 182 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~-~~~~~~~~l~~~gl~---------~~~~f~~~~~~~~~~~~kp~~~~~~~~~ 182 (253)
..++||+.++|+.|+++|++++++||+ ....++..++.+++. . +|+.+++++.....||.+.+++.+.
T Consensus 44 ~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~--~Fd~iv~~~~~~~~kp~~~i~~~~~ 121 (174)
T TIGR01685 44 VTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHS--LFDDRIEIYKPNKAKQLEMILQKVN 121 (174)
T ss_pred EEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHH--hceeeeeccCCchHHHHHHHHHHhh
Confidence 488999999999999999999999998 777888899999997 7 8999888887666678788888887
Q ss_pred HHh--CCCCCCceEEEcCCcccchhhhhhcCCeEEEEcC
Q 039449 183 ERA--GNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDR 219 (253)
Q Consensus 183 ~~~--~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~ 219 (253)
+.+ + +++++|+||||++ .|+.+|+++|+.++++.+
T Consensus 122 ~~~~~g-l~p~e~l~VgDs~-~di~aA~~aGi~~i~v~~ 158 (174)
T TIGR01685 122 KVDPSV-LKPAQILFFDDRT-DNVREVWGYGVTSCYCPS 158 (174)
T ss_pred hcccCC-CCHHHeEEEcChh-HhHHHHHHhCCEEEEcCC
Confidence 777 8 9999999999999 899999999999999973
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.5e-19 Score=135.36 Aligned_cols=95 Identities=13% Similarity=0.115 Sum_probs=80.4
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCC----CcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCC
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNA----EYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIA 189 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~----~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~ 189 (253)
.+++++.++|++++++|++++++||. ....++.+++.+|+.. +|+.++.++.....||++. .++++++ +
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~--~f~~i~~~d~~~~~Kp~~~---~~l~~~~-i- 186 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPA--MNPVIFAGDKPGQYQYTKT---QWIQDKN-I- 186 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCch--heeEEECCCCCCCCCCCHH---HHHHhCC-C-
Confidence 56677999999999999999999998 4446778888999998 8888777777666788765 3566777 5
Q ss_pred CCceEEEcCCcccchhhhhhcCCeEEEEcC
Q 039449 190 PEEALHIGDSFRKDYVPAKSVGMHALLVDR 219 (253)
Q Consensus 190 ~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~ 219 (253)
++||||+. +|+.+|+++|+.+|.+.+
T Consensus 187 ---~i~vGDs~-~DI~aAk~AGi~~I~V~~ 212 (237)
T TIGR01672 187 ---RIHYGDSD-NDITAAKEAGARGIRILR 212 (237)
T ss_pred ---eEEEeCCH-HHHHHHHHCCCCEEEEEe
Confidence 79999999 999999999999999984
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.1e-19 Score=139.43 Aligned_cols=128 Identities=20% Similarity=0.174 Sum_probs=100.8
Q ss_pred CCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccC---ccCCCHHHHHHHHHHhCCCCCCc
Q 039449 116 FPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEG---VEKPDPRIYEIALERAGNIAPEE 192 (253)
Q Consensus 116 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~---~~kp~~~~~~~~~~~~~~~~~~~ 192 (253)
++++.+.++.|++.+++++++||.+.......+..+|+.. +|+.+..+.... ..||+|.++..++++++ +++++
T Consensus 122 y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~--~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~-~~~~~ 198 (257)
T TIGR01458 122 YQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGP--FVTALEYATDTKATVVGKPSKTFFLEALRATG-CEPEE 198 (257)
T ss_pred HHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchH--HHHHHHHHhCCCceeecCCCHHHHHHHHHHhC-CChhh
Confidence 4567788899998889999999999887776777777766 776555443332 26999999999999999 99999
Q ss_pred eEEEcCCcccchhhhhhcCCeEEEEcCCCCCChh---hhhhcCCcccCCHHHHHHHHh
Q 039449 193 ALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAK---EWRKSGAIVLPDLVAVKEFLT 247 (253)
Q Consensus 193 ~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~---~~~~~~~~~i~~l~el~~~l~ 247 (253)
++||||+..+|+.+|+++|++++++.+ +..... .....++++++++.|+.+++.
T Consensus 199 ~~~vGD~~~~Di~~a~~~G~~~i~v~~-G~~~~~~~~~~~~~pd~~~~sl~el~~~l~ 255 (257)
T TIGR01458 199 AVMIGDDCRDDVGGAQDCGMRGIQVRT-GKYRPSDEEKINVPPDLTCDSLPHAVDLIL 255 (257)
T ss_pred EEEECCCcHHHHHHHHHcCCeEEEECC-CCCChHHhcccCCCCCEEECCHHHHHHHHh
Confidence 999999965899999999999999984 432211 122345689999999988764
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.6e-18 Score=125.99 Aligned_cols=189 Identities=16% Similarity=0.175 Sum_probs=122.9
Q ss_pred eEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHHHc
Q 039449 8 RCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFVRA 87 (253)
Q Consensus 8 k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (253)
.+++||+||||++. .|.....+.|..... .. ..+......+.+..+. .+...
T Consensus 2 ~la~FDlD~TLi~~------~w~~~~~~~g~~~~~---~~------------------~~~~~~~~~~~~~r~~-ll~~~ 53 (203)
T TIGR02137 2 EIACLDLEGVLVPE------IWIAFAEKTGIDALK---AT------------------TRDIPDYDVLMKQRLR-ILDEH 53 (203)
T ss_pred eEEEEeCCcccHHH------HHHHHHHHcCCcHHH---HH------------------hcCCcCHHHHHHHHHH-HHHHC
Confidence 56999999999973 577778888853211 10 0111122222221111 12222
Q ss_pred CCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccc
Q 039449 88 GYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGL 167 (253)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~ 167 (253)
|+ +.+.+...+.. ++++||+.++++.+++.+ +++|+|++....++.+++.+|++. +|...+....
T Consensus 54 g~--~~~~i~~~~~~----------i~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~--~~an~l~~~~ 118 (203)
T TIGR02137 54 GL--KLGDIQEVIAT----------LKPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPT--LLCHKLEIDD 118 (203)
T ss_pred CC--CHHHHHHHHHh----------CCCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCch--hhceeeEEec
Confidence 43 34444333321 378999999999999975 999999999999999999999987 6653222211
Q ss_pred ----cC---ccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCC-cccCCH
Q 039449 168 ----EG---VEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGA-IVLPDL 239 (253)
Q Consensus 168 ----~~---~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~-~~i~~l 239 (253)
.+ ..++.+......++..+ . ++++|||+. ||+.+++.+|.+.++-.. +.-....++ .++.++
T Consensus 119 ~g~~tG~~~~~~~~K~~~l~~l~~~~-~---~~v~vGDs~-nDl~ml~~Ag~~ia~~ak-----~~~~~~~~~~~~~~~~ 188 (203)
T TIGR02137 119 SDRVVGYQLRQKDPKRQSVIAFKSLY-Y---RVIAAGDSY-NDTTMLSEAHAGILFHAP-----ENVIREFPQFPAVHTY 188 (203)
T ss_pred CCeeECeeecCcchHHHHHHHHHhhC-C---CEEEEeCCH-HHHHHHHhCCCCEEecCC-----HHHHHhCCCCCcccCH
Confidence 11 23454554444455555 3 799999999 999999999999988663 111122333 689999
Q ss_pred HHHHHHHhhh
Q 039449 240 VAVKEFLTSE 249 (253)
Q Consensus 240 ~el~~~l~~~ 249 (253)
+||.+.+...
T Consensus 189 ~~~~~~~~~~ 198 (203)
T TIGR02137 189 EDLKREFLKA 198 (203)
T ss_pred HHHHHHHHHH
Confidence 9999988765
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.4e-19 Score=140.90 Aligned_cols=123 Identities=20% Similarity=0.180 Sum_probs=92.2
Q ss_pred cCCChHHHHHHHHHcCCEEEEEeCCCcchh-hhhhhhcCCCCCcceeEeee---ccccCccCCCHHHHHHHHHHhCCCCC
Q 039449 115 VFPDSQPFLRWAREKGLIVGIISNAEYRYQ-DVILPALGVNQGTEWDFGVF---SGLEGVEKPDPRIYEIALERAGNIAP 190 (253)
Q Consensus 115 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~-~~~l~~~gl~~~~~f~~~~~---~~~~~~~kp~~~~~~~~~~~~~~~~~ 190 (253)
-++++.++++.|+++|. ++++||.+.... ...+...|+.. +|+.+.. ......+||+|.++..++++++ +++
T Consensus 144 ~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~~~~g~--~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~-~~~ 219 (279)
T TIGR01452 144 SYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRTPGTGS--LVAAIETASGRQPLVVGKPSPYMFECITENFS-IDP 219 (279)
T ss_pred CHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcccChHH--HHHHHHHHhCCceeccCCCCHHHHHHHHHHhC-CCh
Confidence 36788999999998887 688999887543 22233445544 5554332 2233457999999999999999 999
Q ss_pred CceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhh---------cCCcccCCHHHH
Q 039449 191 EEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRK---------SGAIVLPDLVAV 242 (253)
Q Consensus 191 ~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~---------~~~~~i~~l~el 242 (253)
++++||||++.+||.+|+++|+++++|. +|....+.+.. .++++++++.|+
T Consensus 220 ~~~lmIGD~~~tDI~~A~~aGi~si~V~-~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 220 ARTLMVGDRLETDILFGHRCGMTTVLVL-SGVSRLEEAQEYLAAGQHDLVPDYVVESLADL 279 (279)
T ss_pred hhEEEECCChHHHHHHHHHcCCcEEEEC-CCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence 9999999995489999999999999998 56555555442 356888888764
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.1e-18 Score=129.30 Aligned_cols=131 Identities=15% Similarity=0.130 Sum_probs=95.3
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcce---eEeeeccccCccCCCHHHH----------H
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEW---DFGVFSGLEGVEKPDPRIY----------E 179 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f---~~~~~~~~~~~~kp~~~~~----------~ 179 (253)
..++||+.++++.|+++|++++|+|++....++.+++.++... .+ ...+..+.....+|.+..+ .
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~--~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~ 146 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKD--RIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKP 146 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcc--cEEeceeEeeCCeeEEeCCCCCccccccCCCCCHH
Confidence 3789999999999999999999999999998998888875433 33 1222233334457766554 4
Q ss_pred HHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHHHHHHhhhh
Q 039449 180 IALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKEFLTSEI 250 (253)
Q Consensus 180 ~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~~~l~~~~ 250 (253)
.++++++ ..++++++|||+. +|+.+|+.+|+ +++.+... ........+...++++.|+.+.|++..
T Consensus 147 ~~l~~~~-~~~~~~i~iGDg~-~D~~~a~~Ad~--~~ar~~l~-~~~~~~~~~~~~~~~f~di~~~l~~~~ 212 (214)
T TIGR03333 147 SLIRKLS-EPNDYHIVIGDSV-TDVEAAKQSDL--CFARDYLL-NECEELGLNHAPFQDFYDVRKELENVK 212 (214)
T ss_pred HHHHHHh-hcCCcEEEEeCCH-HHHHHHHhCCe--eEehHHHH-HHHHHcCCCccCcCCHHHHHHHHHHHh
Confidence 6788888 7889999999999 99999999998 44442111 111122234577899999999987643
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.80 E-value=8.2e-19 Score=125.34 Aligned_cols=100 Identities=18% Similarity=0.178 Sum_probs=83.1
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcc------------hhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHH
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYR------------YQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIA 181 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~------------~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~ 181 (253)
.++||+.++|+.|+++|++++|+||.+.. .++..++.+|+. . +.++.++.....||+|+.+..+
T Consensus 42 ~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~---~-~~ii~~~~~~~~KP~p~~~~~~ 117 (166)
T TIGR01664 42 FLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP---I-QVLAATHAGLYRKPMTGMWEYL 117 (166)
T ss_pred EecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC---E-EEEEecCCCCCCCCccHHHHHH
Confidence 36899999999999999999999998764 356778899984 2 4555555555679999999999
Q ss_pred HHHhC-CCCCCceEEEcCCc-------ccchhhhhhcCCeEEEE
Q 039449 182 LERAG-NIAPEEALHIGDSF-------RKDYVPAKSVGMHALLV 217 (253)
Q Consensus 182 ~~~~~-~~~~~~~~~iGD~~-------~~Di~~a~~~G~~~i~~ 217 (253)
+++++ .+++++++||||+. .+|+++|+++|+++++-
T Consensus 118 ~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~~ 161 (166)
T TIGR01664 118 QSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKYP 161 (166)
T ss_pred HHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCCh
Confidence 99996 27899999999985 25999999999998763
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.1e-18 Score=121.88 Aligned_cols=101 Identities=30% Similarity=0.430 Sum_probs=90.6
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCcc----------------CCCHH
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVE----------------KPDPR 176 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~----------------kp~~~ 176 (253)
..+++++.+++++|+++|++++++|++....++..++..|+.. +++.++.+...... ||++.
T Consensus 23 ~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (139)
T cd01427 23 LELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDD--YFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPD 100 (139)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCch--hhhheeccchhhhhcccccccccccccccCCCCHH
Confidence 4788999999999999999999999999999999999999876 77776666555444 99999
Q ss_pred HHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEE
Q 039449 177 IYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLV 217 (253)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~ 217 (253)
.+..+++.++ .+++++++|||+. +|+.+++++|++++++
T Consensus 101 ~~~~~~~~~~-~~~~~~~~igD~~-~d~~~~~~~g~~~i~v 139 (139)
T cd01427 101 KLLAALKLLG-VDPEEVLMVGDSL-NDIEMAKAAGGLGVAV 139 (139)
T ss_pred HHHHHHHHcC-CChhhEEEeCCCH-HHHHHHHHcCCceeeC
Confidence 9999999999 9999999999999 9999999999999874
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.3e-18 Score=123.99 Aligned_cols=94 Identities=20% Similarity=0.298 Sum_probs=81.2
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCC-cchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCc
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAE-YRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEE 192 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~-~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 192 (253)
.++|++.++|++|++.|++++++||+. ...+..+++.+|+.. + .+..||+++++..++++++ +++++
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~--~---------~~~~KP~p~~~~~~l~~~~-~~~~~ 110 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPV--L---------PHAVKPPGCAFRRAHPEMG-LTSEQ 110 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEE--E---------cCCCCCChHHHHHHHHHcC-CCHHH
Confidence 677899999999999999999999998 566666667777643 1 1346999999999999999 99999
Q ss_pred eEEEcCCcccchhhhhhcCCeEEEEcC
Q 039449 193 ALHIGDSFRKDYVPAKSVGMHALLVDR 219 (253)
Q Consensus 193 ~~~iGD~~~~Di~~a~~~G~~~i~~~~ 219 (253)
++||||+..+|+.+|+++|+.+|++++
T Consensus 111 ~l~IGDs~~~Di~aA~~aGi~~i~v~~ 137 (170)
T TIGR01668 111 VAVVGDRLFTDVMGGNRNGSYTILVEP 137 (170)
T ss_pred EEEECCcchHHHHHHHHcCCeEEEEcc
Confidence 999999983599999999999999984
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.1e-18 Score=133.37 Aligned_cols=121 Identities=15% Similarity=0.048 Sum_probs=88.7
Q ss_pred HHHHHHcCCEEEEEeCCCcch-hhhhhhhcCCCCCcceeEeeeccccC---ccCCCHHHHHHHHHHhCCCCCCceEEEcC
Q 039449 123 LRWAREKGLIVGIISNAEYRY-QDVILPALGVNQGTEWDFGVFSGLEG---VEKPDPRIYEIALERAGNIAPEEALHIGD 198 (253)
Q Consensus 123 l~~l~~~g~~~~i~s~~~~~~-~~~~l~~~gl~~~~~f~~~~~~~~~~---~~kp~~~~~~~~~~~~~~~~~~~~~~iGD 198 (253)
...++.++-..+++||.+... ....+...|... +|+.+..+.... .+||+|.++..++++++ +++++++||||
T Consensus 179 ~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~g~g~--~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~-~~~~~~~~VGD 255 (311)
T PLN02645 179 TLCIRENPGCLFIATNRDAVTHLTDAQEWAGAGS--MVGAIKGSTEREPLVVGKPSTFMMDYLANKFG-IEKSQICMVGD 255 (311)
T ss_pred HHHHhcCCCCEEEEeCCCCCCCCCCCCCccchHH--HHHHHHHHhCCCcccCCCChHHHHHHHHHHcC-CCcccEEEEcC
Confidence 444544222467889888754 333445556655 666655544432 25999999999999999 99999999999
Q ss_pred CcccchhhhhhcCCeEEEEcCCCCCChhhhhh-----cCCcccCCHHHHHHHHh
Q 039449 199 SFRKDYVPAKSVGMHALLVDRFKTPDAKEWRK-----SGAIVLPDLVAVKEFLT 247 (253)
Q Consensus 199 ~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~-----~~~~~i~~l~el~~~l~ 247 (253)
++.+|+.+|+++|+++++|. +|....+.+.. .++++++++.+|.+++.
T Consensus 256 ~~~~Di~~A~~aG~~~ilV~-~G~~~~~~~~~~~~~~~pd~~~~~~~~l~~~~~ 308 (311)
T PLN02645 256 RLDTDILFGQNGGCKTLLVL-SGVTSESMLLSPENKIQPDFYTSKISDFLTLKA 308 (311)
T ss_pred CcHHHHHHHHHcCCCEEEEc-CCCCCHHHHHhccCCCCCCEEECCHHHHHHHhh
Confidence 97689999999999999998 45555554432 35689999999988664
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.8e-18 Score=128.77 Aligned_cols=71 Identities=24% Similarity=0.405 Sum_probs=61.6
Q ss_pred ccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhh---hcCCcccCCHHHH
Q 039449 170 VEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWR---KSGAIVLPDLVAV 242 (253)
Q Consensus 170 ~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~---~~~~~~i~~l~el 242 (253)
.+||+|+++..++++++ +++++++||||+..+|+.+|+++|++++++. +|....+.+. ..++++++|+.++
T Consensus 172 ~gKP~~~~~~~~~~~~~-~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~-~G~~~~~~l~~~~~~pd~~~~sl~el 245 (248)
T PRK10444 172 VGKPSPWIIRAALNKMQ-AHSEETVIVGDNLRTDILAGFQAGLETILVL-SGVSTLDDIDSMPFRPSWIYPSVADI 245 (248)
T ss_pred cCCCCHHHHHHHHHHcC-CCcccEEEECCCcHHHHHHHHHcCCCEEEEC-CCCCCHHHHhcCCCCCCEEECCHHHh
Confidence 46999999999999999 9999999999997689999999999999998 5666555554 3466899999987
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.9e-17 Score=123.24 Aligned_cols=120 Identities=14% Similarity=0.192 Sum_probs=96.4
Q ss_pred CChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeec-cc--
Q 039449 91 YDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFS-GL-- 167 (253)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~-~~-- 167 (253)
.+.+++....+.++..... ..++|++.++++.++++|++++|+|++....++.+++.+|++. +|...+.. .+
T Consensus 67 ~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~--~~~~~l~~~~~g~ 141 (202)
T TIGR01490 67 LLEEDVRAIVEEFVNQKIE---SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDN--AIGTRLEESEDGI 141 (202)
T ss_pred CCHHHHHHHHHHHHHHHHH---HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcc--eEecceEEcCCCE
Confidence 4677777777777765442 2678999999999999999999999999999999999999987 65542221 11
Q ss_pred --------cCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEE
Q 039449 168 --------EGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLV 217 (253)
Q Consensus 168 --------~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~ 217 (253)
...+++|...+++++++.+ ++++++++||||. +|+.+++.+|.+++.-
T Consensus 142 ~~g~~~~~~~~g~~K~~~l~~~~~~~~-~~~~~~~~~gDs~-~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 142 YTGNIDGNNCKGEGKVHALAELLAEEQ-IDLKDSYAYGDSI-SDLPLLSLVGHPYVVN 197 (202)
T ss_pred EeCCccCCCCCChHHHHHHHHHHHHcC-CCHHHcEeeeCCc-ccHHHHHhCCCcEEeC
Confidence 1223567788999999999 9999999999999 9999999999887553
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.76 E-value=7.5e-18 Score=115.19 Aligned_cols=91 Identities=27% Similarity=0.433 Sum_probs=81.6
Q ss_pred CChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEE
Q 039449 117 PDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHI 196 (253)
Q Consensus 117 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~i 196 (253)
|.+.+.+.++++.|+++.|+||+....+....+.+|++- .....||.+.++.+++++++ +++++|+||
T Consensus 49 pe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~f-----------i~~A~KP~~~~fr~Al~~m~-l~~~~vvmV 116 (175)
T COG2179 49 PELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVPF-----------IYRAKKPFGRAFRRALKEMN-LPPEEVVMV 116 (175)
T ss_pred HHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCce-----------eecccCccHHHHHHHHHHcC-CChhHEEEE
Confidence 455677888999999999999999999999999998873 12456999999999999999 999999999
Q ss_pred cCCcccchhhhhhcCCeEEEEcC
Q 039449 197 GDSFRKDYVPAKSVGMHALLVDR 219 (253)
Q Consensus 197 GD~~~~Di~~a~~~G~~~i~~~~ 219 (253)
||+..+|+.+++++|+.+|+|.+
T Consensus 117 GDqL~TDVlggnr~G~~tIlV~P 139 (175)
T COG2179 117 GDQLFTDVLGGNRAGMRTILVEP 139 (175)
T ss_pred cchhhhhhhcccccCcEEEEEEE
Confidence 99999999999999999999983
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.9e-17 Score=118.64 Aligned_cols=94 Identities=18% Similarity=0.203 Sum_probs=75.2
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeecccc--------------------CccC
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLE--------------------GVEK 172 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~--------------------~~~k 172 (253)
.+++|++.++++.|+++|++++++||+....++..++.+|+.. +|+.++.+... ..+.
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~--~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~ 148 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKD--VFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGC 148 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChh--heeEEeccCceECCCCcEEEecCCCCccCcCCCCC
Confidence 3788999999999999999999999999999999999999988 88887754321 1123
Q ss_pred CCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCe
Q 039449 173 PDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMH 213 (253)
Q Consensus 173 p~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~ 213 (253)
+|++.++.+.+.. ++++++|||+. +|+.+|+++++-
T Consensus 149 ~K~~~~~~~~~~~----~~~~i~iGD~~-~D~~aa~~~d~~ 184 (188)
T TIGR01489 149 CKGKVIHKLSEPK----YQHIIYIGDGV-TDVCPAKLSDVV 184 (188)
T ss_pred CHHHHHHHHHhhc----CceEEEECCCc-chhchHhcCCcc
Confidence 4566666554432 67999999999 999999998654
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.2e-17 Score=118.97 Aligned_cols=99 Identities=20% Similarity=0.170 Sum_probs=83.4
Q ss_pred HHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCc
Q 039449 121 PFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSF 200 (253)
Q Consensus 121 ~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~ 200 (253)
..++.|+++|++++|+||.....++..++.+|+.. +|+. .||+|+.+..++++++ ++++++++|||+.
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~--~f~~---------~kpkp~~~~~~~~~l~-~~~~ev~~iGD~~ 108 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR--FHEG---------IKKKTEPYAQMLEEMN-ISDAEVCYVGDDL 108 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE--EEec---------CCCCHHHHHHHHHHcC-cCHHHEEEECCCH
Confidence 44667888999999999999999999999999987 6653 2799999999999999 9999999999999
Q ss_pred ccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccC
Q 039449 201 RKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLP 237 (253)
Q Consensus 201 ~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~ 237 (253)
||+.+++.+|++.++-+. .+.+.....+++.
T Consensus 109 -nDi~~~~~ag~~~am~nA-----~~~lk~~A~~I~~ 139 (169)
T TIGR02726 109 -VDLSMMKRVGLAVAVGDA-----VADVKEAAAYVTT 139 (169)
T ss_pred -HHHHHHHHCCCeEECcCc-----hHHHHHhCCEEcC
Confidence 999999999999998763 2344455555544
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.75 E-value=8.2e-17 Score=119.29 Aligned_cols=174 Identities=16% Similarity=0.132 Sum_probs=119.9
Q ss_pred cCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHH
Q 039449 5 SRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSF 84 (253)
Q Consensus 5 ~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (253)
++.++++||+||||++ ...+..+.+..|..... ..+...+. .+.+...+. ++...
T Consensus 3 ~~~~L~vFD~D~TLi~-----~~~~~~~~~~~g~~~~v-~~~t~~~~---------------~~~~~~~~~----~~~~v 57 (212)
T COG0560 3 RMKKLAVFDLDGTLIN-----AELIDELARGAGVGEEV-LAITERAM---------------RGELDFEES----LRLRV 57 (212)
T ss_pred CccceEEEecccchhh-----HHHHHHHHHHhCCHHHH-HHHHHHHh---------------cccccHHHH----HHHHH
Confidence 4578999999999999 34455555566653211 11111110 001111111 21111
Q ss_pred HHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeee
Q 039449 85 VRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVF 164 (253)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~ 164 (253)
..+ ...+.+.+.....++ .+++||+.++++.+++.|++++|+|++....++.+.+.+|++. .+...+.
T Consensus 58 ~~l-~g~~~~~v~~~~~~~---------~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~--~~an~l~ 125 (212)
T COG0560 58 ALL-KGLPVEVLEEVREEF---------LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDY--VVANELE 125 (212)
T ss_pred HHh-CCCCHHHHHHHHHhc---------CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCch--heeeEEE
Confidence 111 122444444444443 3889999999999999999999999999999999999999998 6666555
Q ss_pred ccc---cC-------ccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEE
Q 039449 165 SGL---EG-------VEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLV 217 (253)
Q Consensus 165 ~~~---~~-------~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~ 217 (253)
..+ .| ..+-|...+.++++.+| +++++++++||+. ||+.|.+.+|.+.++=
T Consensus 126 ~~dG~ltG~v~g~~~~~~~K~~~l~~~~~~~g-~~~~~~~a~gDs~-nDlpml~~ag~~ia~n 186 (212)
T COG0560 126 IDDGKLTGRVVGPICDGEGKAKALRELAAELG-IPLEETVAYGDSA-NDLPMLEAAGLPIAVN 186 (212)
T ss_pred EeCCEEeceeeeeecCcchHHHHHHHHHHHcC-CCHHHeEEEcCch-hhHHHHHhCCCCeEeC
Confidence 544 11 12457889999999999 9999999999999 9999999999987663
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.2e-17 Score=129.39 Aligned_cols=101 Identities=20% Similarity=0.261 Sum_probs=84.7
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCC---------------cchhhhhhhhcCCCCCcceeEeeec-----cccCccC
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAE---------------YRYQDVILPALGVNQGTEWDFGVFS-----GLEGVEK 172 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~---------------~~~~~~~l~~~gl~~~~~f~~~~~~-----~~~~~~k 172 (253)
..++||+.++|.+|+++|++++|+||.+ ...+..+++.+|+. |+.++++ +..+..|
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~----fd~i~i~~~~~sd~~~~rK 104 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK----FDEVLICPHFPEDNCSCRK 104 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc----eeeEEEeCCcCcccCCCCC
Confidence 3889999999999999999999999952 22344566777773 4555443 3456779
Q ss_pred CCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcC
Q 039449 173 PDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDR 219 (253)
Q Consensus 173 p~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~ 219 (253)
|+|.++..++++++ +++++++||||+. +|+.+|+++|+++|++++
T Consensus 105 P~p~~l~~a~~~l~-v~~~~svmIGDs~-sDi~aAk~aGi~~I~v~~ 149 (354)
T PRK05446 105 PKTGLVEEYLAEGA-IDLANSYVIGDRE-TDVQLAENMGIKGIRYAR 149 (354)
T ss_pred CCHHHHHHHHHHcC-CCcccEEEEcCCH-HHHHHHHHCCCeEEEEEC
Confidence 99999999999999 9999999999999 999999999999999984
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.5e-18 Score=119.97 Aligned_cols=110 Identities=21% Similarity=0.235 Sum_probs=86.6
Q ss_pred HHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcc
Q 039449 122 FLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFR 201 (253)
Q Consensus 122 ~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~ 201 (253)
.+++|+++|++++|+||.....+...++.+|+.. +|+. .+|+++.+..++++++ +++++|++|||+.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~--~~~~---------~~~k~~~~~~~~~~~~-~~~~~~~~vGDs~- 102 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH--LYQG---------QSNKLIAFSDILEKLA-LAPENVAYIGDDL- 102 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE--EEec---------ccchHHHHHHHHHHcC-CCHHHEEEECCCH-
Confidence 7899999999999999999999999999999987 5542 3788999999999999 9999999999999
Q ss_pred cchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHH---HHHHHhhh
Q 039449 202 KDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVA---VKEFLTSE 249 (253)
Q Consensus 202 ~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~e---l~~~l~~~ 249 (253)
+|+.+++.+|++ +.+.. .. +.....+++++++..+ +..++++.
T Consensus 103 ~D~~~~~~ag~~-~~v~~-~~---~~~~~~a~~i~~~~~~~g~~~~~~~~~ 148 (154)
T TIGR01670 103 IDWPVMEKVGLS-VAVAD-AH---PLLIPRADYVTRIAGGRGAVREVCELL 148 (154)
T ss_pred HHHHHHHHCCCe-EecCC-cC---HHHHHhCCEEecCCCCCcHHHHHHHHH
Confidence 999999999998 44432 11 2334445556654432 45555443
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.6e-18 Score=129.47 Aligned_cols=122 Identities=23% Similarity=0.170 Sum_probs=80.8
Q ss_pred CChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCC-CcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEE
Q 039449 117 PDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQ-GTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALH 195 (253)
Q Consensus 117 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~-~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~ 195 (253)
+.....+..++ .|.+ .++||.+.......-...+-.. ...+............||+|++|+.+++.++ +++++++|
T Consensus 124 ~~l~~a~~~l~-~g~~-~i~tN~D~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~-~~~~~~~~ 200 (249)
T TIGR01457 124 EKFATATLAIR-KGAH-FIGTNGDLAIPTERGLLPGNGSLITVLEVATGVKPVYIGKPNAIIMEKAVEHLG-TEREETLM 200 (249)
T ss_pred HHHHHHHHHHH-CCCe-EEEECCCCCCCCCCCCCCCcHHHHHHHHHHhCCCccccCCChHHHHHHHHHHcC-CCcccEEE
Confidence 34445566664 5777 6889988765422111111110 0012222223344457999999999999999 99999999
Q ss_pred EcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhh---cCCcccCCHHHH
Q 039449 196 IGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRK---SGAIVLPDLVAV 242 (253)
Q Consensus 196 iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~---~~~~~i~~l~el 242 (253)
|||++.+|+.+|+++|++++++. ++....+.+.. .++++++++.++
T Consensus 201 VGD~~~~Di~~a~~~G~~~v~v~-~G~~~~~~~~~~~~~pd~~v~~l~~~ 249 (249)
T TIGR01457 201 VGDNYLTDIRAGIDAGIDTLLVH-TGVTKAEEVAGLPIAPTHVVSSLAEW 249 (249)
T ss_pred ECCCchhhHHHHHHcCCcEEEEc-CCCCCHHHHhcCCCCCCEEeCChhhC
Confidence 99997479999999999999998 45444444332 355788888764
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=99.71 E-value=3e-16 Score=114.39 Aligned_cols=94 Identities=17% Similarity=0.273 Sum_probs=77.4
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccc------------cCccCCCHHHHHH
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGL------------EGVEKPDPRIYEI 180 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~------------~~~~kp~~~~~~~ 180 (253)
+.++|++.++++.++++|++++|+|++....++..++.+|+.. +|...+.... ......|...++.
T Consensus 72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~--~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~ 149 (177)
T TIGR01488 72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDD--VFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKE 149 (177)
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCch--heeeeEEECCCCEEeCccCCcccCCcchHHHHHHH
Confidence 3678999999999999999999999999999999999999987 6554443321 1122456788888
Q ss_pred HHHHhCCCCCCceEEEcCCcccchhhhhhc
Q 039449 181 ALERAGNIAPEEALHIGDSFRKDYVPAKSV 210 (253)
Q Consensus 181 ~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~ 210 (253)
+++.++ ++++++++|||+. +|+.+++.+
T Consensus 150 ~~~~~~-~~~~~~~~iGDs~-~D~~~~~~a 177 (177)
T TIGR01488 150 LLEESK-ITLKKIIAVGDSV-NDLPMLKLA 177 (177)
T ss_pred HHHHhC-CCHHHEEEEeCCH-HHHHHHhcC
Confidence 899998 9999999999999 999998764
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=6.9e-17 Score=117.70 Aligned_cols=109 Identities=21% Similarity=0.258 Sum_probs=86.9
Q ss_pred HHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCc
Q 039449 121 PFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSF 200 (253)
Q Consensus 121 ~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~ 200 (253)
..++.|+++|++++|+||.....+...++.+|+.. +|. ..+++++.+..++++++ +++++++||||+.
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~--~f~---------g~~~k~~~l~~~~~~~g-l~~~ev~~VGDs~ 122 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH--LYQ---------GQSNKLIAFSDLLEKLA-IAPEQVAYIGDDL 122 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce--eec---------CCCcHHHHHHHHHHHhC-CCHHHEEEECCCH
Confidence 35667778999999999999999999999999986 443 13567899999999999 9999999999999
Q ss_pred ccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccC------CHHHHHHHHh
Q 039449 201 RKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLP------DLVAVKEFLT 247 (253)
Q Consensus 201 ~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~------~l~el~~~l~ 247 (253)
+|+.+++++|++++ +. . ..+......+++++ .+.|+.+++.
T Consensus 123 -~D~~~a~~aG~~~~-v~-~---~~~~~~~~a~~v~~~~~g~g~~~el~~~i~ 169 (183)
T PRK09484 123 -IDWPVMEKVGLSVA-VA-D---AHPLLLPRADYVTRIAGGRGAVREVCDLLL 169 (183)
T ss_pred -HHHHHHHHCCCeEe-cC-C---hhHHHHHhCCEEecCCCCCCHHHHHHHHHH
Confidence 99999999999954 43 1 12233344567775 6788877664
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.1e-16 Score=117.43 Aligned_cols=94 Identities=12% Similarity=0.093 Sum_probs=75.3
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCc----chhhhhhhhcCC--CCCcceeEeeeccccCccCCCHHHHHHHHHHhC
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEY----RYQDVILPALGV--NQGTEWDFGVFSGLEGVEKPDPRIYEIALERAG 186 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~----~~~~~~l~~~gl--~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~ 186 (253)
..++||+.++|+.|+++|++++++||... ..++.+++.+|+ .. +|..++..+. ..||++.. .+++++
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~--~f~vil~gd~--~~K~~K~~---~l~~~~ 185 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADN--MNPVIFAGDK--PGQYTKTQ---WLKKKN 185 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCccc--ceeEEEcCCC--CCCCCHHH---HHHhcC
Confidence 47889999999999999999999999753 245666777999 65 7776655543 25666653 556677
Q ss_pred CCCCCceEEEcCCcccchhhhhhcCCeEEEEcC
Q 039449 187 NIAPEEALHIGDSFRKDYVPAKSVGMHALLVDR 219 (253)
Q Consensus 187 ~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~ 219 (253)
+ ++||||+. +|+.+|+++|+.+|.+.+
T Consensus 186 -i----~I~IGDs~-~Di~aA~~AGi~~I~v~~ 212 (237)
T PRK11009 186 -I----RIFYGDSD-NDITAAREAGARGIRILR 212 (237)
T ss_pred -C----eEEEcCCH-HHHHHHHHcCCcEEEEec
Confidence 5 89999999 999999999999999995
|
|
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.5e-17 Score=123.31 Aligned_cols=78 Identities=32% Similarity=0.485 Sum_probs=66.1
Q ss_pred CccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhh---hcCCcccCCHHHHHHH
Q 039449 169 GVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWR---KSGAIVLPDLVAVKEF 245 (253)
Q Consensus 169 ~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~---~~~~~~i~~l~el~~~ 245 (253)
-.+||++.+++.+++.++ .++++++||||++++||.+|+++|+.+++|. +|....+++. ..+.++++|+.++...
T Consensus 187 ~~GKP~~~i~~~al~~~~-~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~-TGv~~~~~~~~~~~~p~~v~~sl~~~~~~ 264 (269)
T COG0647 187 VIGKPSPAIYEAALEKLG-LDRSEVLMVGDRLDTDILGAKAAGLDTLLVL-TGVSSAEDLDRAEVKPTYVVDSLAELITA 264 (269)
T ss_pred ccCCCCHHHHHHHHHHhC-CCcccEEEEcCCchhhHHHHHHcCCCEEEEc-cCCCChhhhhhhccCCcchHhhHHHHHhh
Confidence 356999999999999999 9999999999999999999999999999999 4655444433 3356899999999877
Q ss_pred Hhh
Q 039449 246 LTS 248 (253)
Q Consensus 246 l~~ 248 (253)
+..
T Consensus 265 ~~~ 267 (269)
T COG0647 265 LKE 267 (269)
T ss_pred hhc
Confidence 754
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.69 E-value=7.8e-17 Score=121.19 Aligned_cols=89 Identities=25% Similarity=0.411 Sum_probs=78.7
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCce
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEA 193 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 193 (253)
+++|++.++|++|++.|++++++|+.....+..+.+.+|+.. ..+++... .||.+.++..+++.++ .++++|
T Consensus 127 ~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~-----~~v~a~~~--~kP~~k~~~~~i~~l~-~~~~~v 198 (215)
T PF00702_consen 127 PLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD-----SIVFARVI--GKPEPKIFLRIIKELQ-VKPGEV 198 (215)
T ss_dssp EBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS-----EEEEESHE--TTTHHHHHHHHHHHHT-CTGGGE
T ss_pred cchhhhhhhhhhhhccCcceeeeecccccccccccccccccc-----cccccccc--ccccchhHHHHHHHHh-cCCCEE
Confidence 678999999999999999999999999999999999999965 11222222 7899999999999999 999999
Q ss_pred EEEcCCcccchhhhhhcC
Q 039449 194 LHIGDSFRKDYVPAKSVG 211 (253)
Q Consensus 194 ~~iGD~~~~Di~~a~~~G 211 (253)
+||||+. ||+.++++||
T Consensus 199 ~~vGDg~-nD~~al~~Ag 215 (215)
T PF00702_consen 199 AMVGDGV-NDAPALKAAG 215 (215)
T ss_dssp EEEESSG-GHHHHHHHSS
T ss_pred EEEccCH-HHHHHHHhCc
Confidence 9999999 9999999987
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.7e-16 Score=124.12 Aligned_cols=103 Identities=13% Similarity=0.060 Sum_probs=91.8
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeecc-------ccCccCCCHHHHHHHHHHhC
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSG-------LEGVEKPDPRIYEIALERAG 186 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~-------~~~~~kp~~~~~~~~~~~~~ 186 (253)
.++|++.++++.|+++|++++++||.+....+..++.+++.. .+|+.+.... ..+..||+|..+..++++++
T Consensus 187 ~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~-~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~~ 265 (300)
T PHA02530 187 KPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTD-IWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEKI 265 (300)
T ss_pred CCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcC-CchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHHh
Confidence 678999999999999999999999999999999999999873 2677766666 34567999999999999998
Q ss_pred CC-CCCceEEEcCCcccchhhhhhcCCeEEEEcC
Q 039449 187 NI-APEEALHIGDSFRKDYVPAKSVGMHALLVDR 219 (253)
Q Consensus 187 ~~-~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~ 219 (253)
. ++++|++|||+. +|+.+|+++|++++++.+
T Consensus 266 -~~~~~~~~~vgD~~-~d~~~a~~~Gi~~i~v~~ 297 (300)
T PHA02530 266 -APKYDVLLAVDDRD-QVVDMWRRIGLECWQVAP 297 (300)
T ss_pred -ccCceEEEEEcCcH-HHHHHHHHhCCeEEEecC
Confidence 8 579999999999 899999999999999974
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.3e-15 Score=117.30 Aligned_cols=125 Identities=17% Similarity=0.277 Sum_probs=78.7
Q ss_pred CCChHHHHHHHHHcCCEEEEEeCCCc-----chhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCC
Q 039449 116 FPDSQPFLRWAREKGLIVGIISNAEY-----RYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAP 190 (253)
Q Consensus 116 ~~~~~~~l~~l~~~g~~~~i~s~~~~-----~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~ 190 (253)
++++.+++..++..+..+.++++... ...+.+.+.+++.. .+......+.......|+.+++.+++.+| +++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~s~~~~~ei~~~~~~K~~~l~~l~~~~g-i~~ 215 (272)
T PRK10530 139 FTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHELGLEC--EWSWHDQVDIARKGNSKGKRLTQWVEAQG-WSM 215 (272)
T ss_pred eEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhhcCceE--EEecCceEEEecCCCChHHHHHHHHHHcC-CCH
Confidence 45666777777666666666666442 12333334444431 11000011222233457789999999999 999
Q ss_pred CceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHH--HHHHHhhh
Q 039449 191 EEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVA--VKEFLTSE 249 (253)
Q Consensus 191 ~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~e--l~~~l~~~ 249 (253)
+++++|||+. ||+.|++.+|+..++-+ ..+.+....++++++-++ +..+|++.
T Consensus 216 ~e~i~~GD~~-NDi~m~~~ag~~vamgn-----a~~~lk~~Ad~v~~~n~~dGv~~~l~~~ 270 (272)
T PRK10530 216 KNVVAFGDNF-NDISMLEAAGLGVAMGN-----ADDAVKARADLVIGDNTTPSIAEFIYSH 270 (272)
T ss_pred HHeEEeCCCh-hhHHHHHhcCceEEecC-----chHHHHHhCCEEEecCCCCcHHHHHHHH
Confidence 9999999999 99999999998766543 134455566677766554 66666543
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=7.8e-14 Score=104.27 Aligned_cols=189 Identities=11% Similarity=-0.038 Sum_probs=105.2
Q ss_pred CceEEEEecCCceeccCCCHHHHHHHHH-HHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHH
Q 039449 6 RLRCITVDVTGTLLAYKGELGDYYCMAA-KSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSF 84 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (253)
+.|+++||+||||++ ..+...+...+ +++|+.......... .+|.+........... ....+
T Consensus 5 ~~k~~iFD~DGTL~~--~d~~~~~~~~~~~~~g~~~~~~~~~~~--------------~ig~~l~~~~~~~~~~-~~~~~ 67 (211)
T PRK11590 5 ERRVVFFDLDGTLHQ--QDMFGSFLRYLLRRQPLNLLLVLPLLP--------------VIGLGLLVKGRAARWP-MSLLL 67 (211)
T ss_pred cceEEEEecCCCCcc--cchHHHHHHHHHHhcchhhHHHhHHHH--------------HhccCcccchhhhhhh-HHHHH
Confidence 468999999999993 33555666655 787765433222221 1222111100000000 00001
Q ss_pred HHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHH-HHHHHcCCEEEEEeCCCcchhhhhhhhcCC---CCCccee
Q 039449 85 VRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFL-RWAREKGLIVGIISNAEYRYQDVILPALGV---NQGTEWD 160 (253)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl---~~~~~f~ 160 (253)
-......+.+++......+.+.+... ..++||+.++| +.+++.|++++|+||.....++.+++.+|+ .. ...
T Consensus 68 ~~~~~g~~~~~~~~~~~~f~~~~~~~--~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~~--~i~ 143 (211)
T PRK11590 68 WGCTFGHSEARLQALEADFVRWFRDN--VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRVN--LIA 143 (211)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHh--CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccCc--eEE
Confidence 10001224444444444442222111 36699999999 578889999999999999999999999885 22 111
Q ss_pred Ee----eeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEc
Q 039449 161 FG----VFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVD 218 (253)
Q Consensus 161 ~~----~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~ 218 (253)
.. +++...+..--..+-...+-+.++ .+...+.+.|||. +|+.+...+|-+. .|+
T Consensus 144 t~l~~~~tg~~~g~~c~g~~K~~~l~~~~~-~~~~~~~aY~Ds~-~D~pmL~~a~~~~-~vn 202 (211)
T PRK11590 144 SQMQRRYGGWVLTLRCLGHEKVAQLERKIG-TPLRLYSGYSDSK-QDNPLLYFCQHRW-RVT 202 (211)
T ss_pred EEEEEEEccEECCccCCChHHHHHHHHHhC-CCcceEEEecCCc-ccHHHHHhCCCCE-EEC
Confidence 11 111111111111223333444457 6778889999999 9999999999764 444
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.1e-15 Score=116.64 Aligned_cols=99 Identities=19% Similarity=0.205 Sum_probs=80.3
Q ss_pred CCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEe--eeccccCccCCCHHHHHHHHHHhCCCC-CCc
Q 039449 116 FPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFG--VFSGLEGVEKPDPRIYEIALERAGNIA-PEE 192 (253)
Q Consensus 116 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~--~~~~~~~~~kp~~~~~~~~~~~~~~~~-~~~ 192 (253)
++++.++++.+.++|+++ ++||.+.......+..++... +|..+ .........||+|+.++.++++++ .. +++
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~--~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~-~~~~~~ 215 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGY--YAELIKQLGGKVIYSGKPYPAIFHKALKECS-NIPKNR 215 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccH--HHHHHHHhCCcEecCCCCCHHHHHHHHHHcC-CCCccc
Confidence 567888999988889997 889999888776777777665 55543 233333467999999999999998 75 578
Q ss_pred eEEEcCCcccchhhhhhcCCeEEEEc
Q 039449 193 ALHIGDSFRKDYVPAKSVGMHALLVD 218 (253)
Q Consensus 193 ~~~iGD~~~~Di~~a~~~G~~~i~~~ 218 (253)
++||||+..+|+.+|+++|+.++++.
T Consensus 216 ~~~vGD~~~~Di~~a~~~G~~~i~v~ 241 (242)
T TIGR01459 216 MLMVGDSFYTDILGANRLGIDTALVL 241 (242)
T ss_pred EEEECCCcHHHHHHHHHCCCeEEEEe
Confidence 99999994489999999999999985
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.8e-14 Score=105.05 Aligned_cols=200 Identities=18% Similarity=0.206 Sum_probs=128.7
Q ss_pred EEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHHHcC
Q 039449 9 CITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFVRAG 88 (253)
Q Consensus 9 ~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (253)
+++||+|+||++.+.. ..+++.++... ...++... ++ . ..+.++ +.+.+..++
T Consensus 2 LvvfDFD~TIvd~dsd-----~~v~~~l~~~~-~~~~l~~~-----------~~---~---~~wt~~----m~~vl~~L~ 54 (234)
T PF06888_consen 2 LVVFDFDHTIVDQDSD-----DWVIELLPPEE-LPEELRES-----------YP---K---GGWTEY----MDRVLQLLH 54 (234)
T ss_pred EEEEeCCCCccCCccH-----HHHHHhcCCcc-cHHHHHHh-----------cc---c---cchHHH----HHHHHHHHH
Confidence 5899999999997652 12344554332 11222221 11 0 112233 344343332
Q ss_pred C-CCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHH--HcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeec
Q 039449 89 Y-DYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAR--EKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFS 165 (253)
Q Consensus 89 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~--~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~ 165 (253)
. ..+.+++.+.+.. +++.||+.++++.++ +.|+.++|+|+++..+++.+|+..|+.. .|+.+++-
T Consensus 55 ~~gvt~~~I~~~l~~----------ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~--~f~~I~TN 122 (234)
T PF06888_consen 55 EQGVTPEDIRDALRS----------IPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRD--CFSEIFTN 122 (234)
T ss_pred HcCCCHHHHHHHHHc----------CCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcc--ccceEEeC
Confidence 1 2356666555533 488899999999994 4799999999999999999999999988 77665553
Q ss_pred cc----cCc------------cCC----CHHHHHHHHHHh---CCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCC
Q 039449 166 GL----EGV------------EKP----DPRIYEIALERA---GNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKT 222 (253)
Q Consensus 166 ~~----~~~------------~kp----~~~~~~~~~~~~---~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~ 222 (253)
.. .|. .=| |...++..++.. | ...++++||||+. ||+.++.+.+-.-+...|.+.
T Consensus 123 pa~~~~~G~l~v~pyh~h~C~~C~~NmCK~~il~~~~~~~~~~g-~~~~rviYiGDG~-nD~Cp~~~L~~~D~v~~R~~~ 200 (234)
T PF06888_consen 123 PACFDADGRLRVRPYHSHGCSLCPPNMCKGKILERLLQEQAQRG-VPYDRVIYIGDGR-NDFCPALRLRPRDVVFPRKGY 200 (234)
T ss_pred CceecCCceEEEeCccCCCCCcCCCccchHHHHHHHHHHHhhcC-CCcceEEEECCCC-CCcCcccccCCCCEEecCCCC
Confidence 11 111 011 456666666653 5 6778999999999 999999998877666666565
Q ss_pred CChhhhhhcC------CcccCCHHHHHHHHhhh
Q 039449 223 PDAKEWRKSG------AIVLPDLVAVKEFLTSE 249 (253)
Q Consensus 223 ~~~~~~~~~~------~~~i~~l~el~~~l~~~ 249 (253)
+-...+.+.+ .....|-.|+.+.|.++
T Consensus 201 ~l~~~i~~~~~~~~a~v~~W~~g~~i~~~l~~~ 233 (234)
T PF06888_consen 201 PLHKLIQKNPGEVKAEVVPWSSGEEILEILLQL 233 (234)
T ss_pred hHHHHHhcCCCcceeEEEecCCHHHHHHHHHhh
Confidence 5333333322 24566888888887764
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.5e-15 Score=103.98 Aligned_cols=89 Identities=10% Similarity=0.094 Sum_probs=74.0
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCC-CcchhhhhhhhcC-------CCCCcceeEeeeccccCccCCCHHHHHHHHHHh
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNA-EYRYQDVILPALG-------VNQGTEWDFGVFSGLEGVEKPDPRIYEIALERA 185 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~-~~~~~~~~l~~~g-------l~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~ 185 (253)
.++||+.++|++|+++|++++++||+ ....+...++..+ +.. +|+.++.+. .+|+|+.+..+++++
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~--~f~~~~~~~----~~pkp~~~~~a~~~l 102 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAE--YFDPLTIGY----WLPKSPRLVEIALKL 102 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHh--hhhhhhhcC----CCcHHHHHHHHHHHh
Confidence 45789999999999999999999999 7777778888888 666 777765553 358899999999999
Q ss_pred C-CCCCCceEEEcCCcccchhhhhh
Q 039449 186 G-NIAPEEALHIGDSFRKDYVPAKS 209 (253)
Q Consensus 186 ~-~~~~~~~~~iGD~~~~Di~~a~~ 209 (253)
| .+.+++|+||||+. .|+...++
T Consensus 103 g~~~~p~~~l~igDs~-~n~~~~~~ 126 (128)
T TIGR01681 103 NGVLKPKSILFVDDRP-DNNEEVDY 126 (128)
T ss_pred cCCCCcceEEEECCCH-hHHHHHHh
Confidence 6 27899999999999 68776543
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.61 E-value=5.1e-15 Score=111.15 Aligned_cols=124 Identities=18% Similarity=0.184 Sum_probs=80.4
Q ss_pred hHHHHHHHHHcCCEEEEEeCCCcchh-hhhhhhcCCCCCcceeEeeecc---ccCccCCCHHHHHHHHHHhCCCCCCceE
Q 039449 119 SQPFLRWAREKGLIVGIISNAEYRYQ-DVILPALGVNQGTEWDFGVFSG---LEGVEKPDPRIYEIALERAGNIAPEEAL 194 (253)
Q Consensus 119 ~~~~l~~l~~~g~~~~i~s~~~~~~~-~~~l~~~gl~~~~~f~~~~~~~---~~~~~kp~~~~~~~~~~~~~~~~~~~~~ 194 (253)
....+++|++-+. ..++||.+.... .......|-.. +...+..+. ..-.+||++.+++.++++++ ++|++++
T Consensus 170 L~kA~~yLqnP~c-lflatn~D~~~p~~~~~~ipG~G~--~v~av~~~t~R~P~v~GKP~~~m~~~l~~~~~-i~psRt~ 245 (306)
T KOG2882|consen 170 LMKALNYLQNPGC-LFLATNRDATTPPTPGVEIPGAGS--FVAAVKFATGRQPIVLGKPSTFMFEYLLEKFN-IDPSRTC 245 (306)
T ss_pred HHHHHHHhCCCCc-EEEeccCccccCCCCCeeccCCcc--HHHHHHHHhcCCCeecCCCCHHHHHHHHHHcC-CCcceEE
Confidence 4455666665543 346777765322 11111112111 112211111 12246999999999999999 9999999
Q ss_pred EEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhc-------CCcccCCHHHHHHHHh
Q 039449 195 HIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKS-------GAIVLPDLVAVKEFLT 247 (253)
Q Consensus 195 ~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~-------~~~~i~~l~el~~~l~ 247 (253)
||||++.+||.-++++|++++++. +|....+..... +++.++++.++...++
T Consensus 246 mvGDRL~TDIlFG~~~G~~TLLvl-tGv~~led~~~~~~~~~~~PDyy~~~l~d~~~~~~ 304 (306)
T KOG2882|consen 246 MVGDRLDTDILFGKNCGFKTLLVL-SGVTTLEDILEAQGDNKMVPDYYADSLGDLLPLLN 304 (306)
T ss_pred EEcccchhhhhHhhccCcceEEEe-cCcCcHHHHHhcccccCCCCchHHhhHHHHhhhcc
Confidence 999999999999999999999999 455544444333 4466777777766554
|
|
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.60 E-value=7.4e-14 Score=99.16 Aligned_cols=126 Identities=20% Similarity=0.247 Sum_probs=93.5
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcc---------------hhhhhhhhcCCCCCcceeEeeecccc-----CccCC
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYR---------------YQDVILPALGVNQGTEWDFGVFSGLE-----GVEKP 173 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~---------------~~~~~l~~~gl~~~~~f~~~~~~~~~-----~~~kp 173 (253)
.+.|++.+.+..+++.|++++++||.+-- .+...++..|. .|+.++++... .-+||
T Consensus 31 ~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv----~id~i~~Cph~p~~~c~cRKP 106 (181)
T COG0241 31 QFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGV----KIDGILYCPHHPEDNCDCRKP 106 (181)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCC----ccceEEECCCCCCCCCcccCC
Confidence 66789999999999999999999996331 12344455554 45666666543 34699
Q ss_pred CHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHHHHHH
Q 039449 174 DPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKEFL 246 (253)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~~~l 246 (253)
++.+++.++++++ +++++.++|||+. +|+++|.++|++.+.+.+ +......-.......+.++.++..++
T Consensus 107 ~~gm~~~~~~~~~-iD~~~s~~VGD~~-~Dlq~a~n~gi~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (181)
T COG0241 107 KPGMLLSALKEYN-IDLSRSYVVGDRL-TDLQAAENAGIKGVLVLT-GIGVTTDGAGRAKWVFDSLAEFANLI 176 (181)
T ss_pred ChHHHHHHHHHhC-CCccceEEecCcH-HHHHHHHHCCCCceEEEc-CcccccccccccccccccHHHHHHHH
Confidence 9999999999999 9999999999999 899999999999887773 22211111113346778888877443
|
|
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=99.56 E-value=7.5e-14 Score=110.67 Aligned_cols=75 Identities=17% Similarity=0.246 Sum_probs=58.9
Q ss_pred ccCCCHHHHHHHHHHh--------CCC-----CCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhh--hhcCCc
Q 039449 170 VEKPDPRIYEIALERA--------GNI-----APEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEW--RKSGAI 234 (253)
Q Consensus 170 ~~kp~~~~~~~~~~~~--------~~~-----~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~--~~~~~~ 234 (253)
.+||++.+|+.+++.+ + . ++++++||||++.+||.+|+++|+.+++|.. |....++. ...+++
T Consensus 231 ~GKP~~~~~~~a~~~l~~~~~~~~~-~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~t-G~~~~~~~~~~~~p~~ 308 (321)
T TIGR01456 231 LGKPTKLTYDFAEDVLIDWEKRLSG-TKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKT-GVYNGGDDLKECKPTL 308 (321)
T ss_pred cCCCChHHHHHHHHHHHHHHhhhcc-ccccCCChheEEEEcCChhhhhhhHHhCCceEEEecc-cccCCCCCCCCCCCCE
Confidence 4799999999988887 4 3 3479999999998999999999999999983 42222211 123568
Q ss_pred ccCCHHHHHHHH
Q 039449 235 VLPDLVAVKEFL 246 (253)
Q Consensus 235 ~i~~l~el~~~l 246 (253)
+++|+.|+...|
T Consensus 309 vv~~l~e~~~~i 320 (321)
T TIGR01456 309 IVNDVFDAVTKI 320 (321)
T ss_pred EECCHHHHHHHh
Confidence 999999998776
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.1e-14 Score=115.43 Aligned_cols=91 Identities=10% Similarity=0.135 Sum_probs=81.2
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhh----cCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCC
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPA----LGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIA 189 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~----~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~ 189 (253)
.+++++.++|+.|+++|+.++|+|+++...+...++. +++.. +|+.+... .||+++.+..++++++ ++
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~--~f~~~~~~-----~~pk~~~i~~~~~~l~-i~ 102 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAE--DFDARSIN-----WGPKSESLRKIAKKLN-LG 102 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHH--HeeEEEEe-----cCchHHHHHHHHHHhC-CC
Confidence 3468999999999999999999999999999999998 88887 77776443 5799999999999999 99
Q ss_pred CCceEEEcCCcccchhhhhhcCCe
Q 039449 190 PEEALHIGDSFRKDYVPAKSVGMH 213 (253)
Q Consensus 190 ~~~~~~iGD~~~~Di~~a~~~G~~ 213 (253)
+++++||||++ .|+.++++++..
T Consensus 103 ~~~~vfidD~~-~d~~~~~~~lp~ 125 (320)
T TIGR01686 103 TDSFLFIDDNP-AERANVKITLPV 125 (320)
T ss_pred cCcEEEECCCH-HHHHHHHHHCCC
Confidence 99999999999 899999997764
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.3e-14 Score=102.18 Aligned_cols=96 Identities=17% Similarity=0.065 Sum_probs=85.3
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCc
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEE 192 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 192 (253)
..++||+.++|++|+ ++++++|+|++....++.+++.+++.. .+|+.+++.++....||+ +.++++.++ .++++
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~-~~f~~i~~~~d~~~~KP~---~~k~l~~l~-~~p~~ 117 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKK-YFGYRRLFRDECVFVKGK---YVKDLSLLG-RDLSN 117 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCC-CEeeeEEECccccccCCe---EeecHHHcC-CChhc
Confidence 377899999999998 569999999999999999999999864 256888888888888886 888999999 99999
Q ss_pred eEEEcCCcccchhhhhhcCCeEE
Q 039449 193 ALHIGDSFRKDYVPAKSVGMHAL 215 (253)
Q Consensus 193 ~~~iGD~~~~Di~~a~~~G~~~i 215 (253)
|++|||++ +|+.++.++|+..-
T Consensus 118 ~i~i~Ds~-~~~~aa~~ngI~i~ 139 (148)
T smart00577 118 VIIIDDSP-DSWPFHPENLIPIK 139 (148)
T ss_pred EEEEECCH-HHhhcCccCEEEec
Confidence 99999999 89999999987654
|
|
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.9e-14 Score=88.17 Aligned_cols=71 Identities=30% Similarity=0.495 Sum_probs=59.7
Q ss_pred ccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhh---hcCCcccCCHHHH
Q 039449 170 VEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWR---KSGAIVLPDLVAV 242 (253)
Q Consensus 170 ~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~---~~~~~~i~~l~el 242 (253)
.+||+|.++..++++++ ++++++++|||++.+|+.+|+++|+.+|+|.+ +....+.+. ..++++++||.|+
T Consensus 2 ~gKP~p~~~~~a~~~~~-~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~t-G~~~~~~~~~~~~~pd~vv~~l~e~ 75 (75)
T PF13242_consen 2 CGKPSPGMLEQALKRLG-VDPSRCVMVGDSLETDIEAAKAAGIDTILVLT-GVYSPEDLEKAEHKPDYVVDDLKEA 75 (75)
T ss_dssp CSTTSHHHHHHHHHHHT-SGGGGEEEEESSTTTHHHHHHHTTSEEEEESS-SSSCCCGHHHSSSTTSEEESSGGGH
T ss_pred CCCCcHHHHHHHHHHcC-CCHHHEEEEcCCcHhHHHHHHHcCCcEEEECC-CCCCHHHHhccCCCCCEEECCHHhC
Confidence 36999999999999999 99999999999933999999999999999994 544443332 4566899999885
|
... |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.7e-14 Score=109.56 Aligned_cols=73 Identities=22% Similarity=0.214 Sum_probs=56.4
Q ss_pred CccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHH--HHHHH
Q 039449 169 GVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVA--VKEFL 246 (253)
Q Consensus 169 ~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~e--l~~~l 246 (253)
....+|+.+++.+++.++ ++++++++|||+. ||+.|++.+|+..++-+. .+.+++...+++++-++ +...|
T Consensus 153 ~~~~~Kg~al~~l~~~~~-i~~~~~i~~GD~~-NDi~m~~~ag~~vam~Na-----~~~vk~~a~~v~~~n~~~Gv~~~l 225 (230)
T PRK01158 153 SPGVNKGTGLKKLAELMG-IDPEEVAAIGDSE-NDLEMFEVAGFGVAVANA-----DEELKEAADYVTEKSYGEGVAEAI 225 (230)
T ss_pred eCCCChHHHHHHHHHHhC-CCHHHEEEECCch-hhHHHHHhcCceEEecCc-----cHHHHHhcceEecCCCcChHHHHH
Confidence 344678899999999999 9999999999999 999999999999887662 23444555666665443 55555
Q ss_pred hh
Q 039449 247 TS 248 (253)
Q Consensus 247 ~~ 248 (253)
++
T Consensus 226 ~~ 227 (230)
T PRK01158 226 EH 227 (230)
T ss_pred HH
Confidence 44
|
|
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.52 E-value=7.4e-13 Score=104.02 Aligned_cols=104 Identities=20% Similarity=0.186 Sum_probs=84.8
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhc-C-------CCCCcceeEeeeccccC---------------
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPAL-G-------VNQGTEWDFGVFSGLEG--------------- 169 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~-g-------l~~~~~f~~~~~~~~~~--------------- 169 (253)
+...|++.++|+.|+++|++++|+||.....++..++.+ | +.. +|+.++++....
T Consensus 183 v~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~--yFD~IIt~a~KP~FF~~~~pf~~v~~~ 260 (343)
T TIGR02244 183 VLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRD--YFDVVIVDARKPGFFTEGRPFRQVDVE 260 (343)
T ss_pred hccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHh--hCcEEEeCCCCCcccCCCCceEEEeCC
Confidence 356899999999999999999999999999999999996 6 777 898877765422
Q ss_pred --ccCCCH------------HHHHHHHHHhCCCCCCceEEEcCCcccchhhhh-hcCCeEEEEcC
Q 039449 170 --VEKPDP------------RIYEIALERAGNIAPEEALHIGDSFRKDYVPAK-SVGMHALLVDR 219 (253)
Q Consensus 170 --~~kp~~------------~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~-~~G~~~i~~~~ 219 (253)
..++.. --...+.+.++ ++++++++|||+...|+..++ .+|+.++++.+
T Consensus 261 ~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~-~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~p 324 (343)
T TIGR02244 261 TGSLKWGEVDGLEPGKVYSGGSLKQFHELLK-WRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIP 324 (343)
T ss_pred CCcccCCccccccCCCeEeCCCHHHHHHHHC-CCCCcEEEECCcchHHHHhhHHhcCcEEEEEch
Confidence 001111 12345677788 999999999999999999998 99999999984
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.8e-13 Score=113.56 Aligned_cols=93 Identities=22% Similarity=0.325 Sum_probs=76.8
Q ss_pred cCCChHHHHHHHHHcCCEEEEEeCCCc------------chhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHH
Q 039449 115 VFPDSQPFLRWAREKGLIVGIISNAEY------------RYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIAL 182 (253)
Q Consensus 115 ~~~~~~~~l~~l~~~g~~~~i~s~~~~------------~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~ 182 (253)
++|++.+.|+.|++.|++++|+||... ..+..+++.+|+. |+.++..+....+||++.++..++
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip----fdviia~~~~~~RKP~pGm~~~a~ 273 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP----FQVFIAIGAGFYRKPLTGMWDHLK 273 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc----eEEEEeCCCCCCCCCCHHHHHHHH
Confidence 579999999999999999999999876 2366778888874 666555555567799999999999
Q ss_pred HHhC---CCCCCceEEEcCCcccchhhhhhcCC
Q 039449 183 ERAG---NIAPEEALHIGDSFRKDYVPAKSVGM 212 (253)
Q Consensus 183 ~~~~---~~~~~~~~~iGD~~~~Di~~a~~~G~ 212 (253)
++++ .+++++++||||+. .|+.+++.+|-
T Consensus 274 ~~~~~~~~Id~~~S~~VGDaa-gr~~~g~~ag~ 305 (526)
T TIGR01663 274 EEANDGTEIQEDDCFFVGDAA-GRPANGKAAGK 305 (526)
T ss_pred HhcCcccCCCHHHeEEeCCcc-cchHHHHhcCC
Confidence 9983 28999999999999 78877666654
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.2e-12 Score=92.87 Aligned_cols=80 Identities=29% Similarity=0.440 Sum_probs=65.4
Q ss_pred CccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCC--ChhhhhhcCCcccCCHHHHHHHH
Q 039449 169 GVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTP--DAKEWRKSGAIVLPDLVAVKEFL 246 (253)
Q Consensus 169 ~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~--~~~~~~~~~~~~i~~l~el~~~l 246 (253)
..+||++..|+.+++.+| ++|++++||||....|+-+|..+||..|.|...... +.......++.+.+++.+..++|
T Consensus 178 vvGKP~~~fFe~al~~~g-v~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~f~~AVd~I 256 (262)
T KOG3040|consen 178 VVGKPSPFFFESALQALG-VDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEKPPVPPDLTADNFADAVDLI 256 (262)
T ss_pred EecCCCHHHHHHHHHhcC-CChHHheEEccccccchhhHhhhcceeEEeeccccCCcccccCCCCcchhhhhHHHHHHHH
Confidence 356999999999999999 999999999999988999999999999999942222 23344445567899999988887
Q ss_pred hhh
Q 039449 247 TSE 249 (253)
Q Consensus 247 ~~~ 249 (253)
-+.
T Consensus 257 ~q~ 259 (262)
T KOG3040|consen 257 IQN 259 (262)
T ss_pred Hhh
Confidence 653
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.6e-12 Score=99.07 Aligned_cols=181 Identities=14% Similarity=0.079 Sum_probs=109.9
Q ss_pred EEEEecCCceeccCC---CHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCC-------hHHHHHH
Q 039449 9 CITVDVTGTLLAYKG---ELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMP-------NIVWWKT 78 (253)
Q Consensus 9 ~i~fD~DGTL~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 78 (253)
-|+-|+|-||..... ..-.....+++....-. + .+......+...|.-+-..-.++ +.+||..
T Consensus 24 qvisDFD~Tlt~~~~~~g~~~~s~~~~~~~~~~~~---~----~~~~~~~~l~~~Y~PiE~d~~~~~~eK~~~m~eWw~k 96 (277)
T TIGR01544 24 QIISDFDYTLSRFSYEDGKRCPTCHGIFDNCKLLT---D----ECRKKLLQLKEKYYPIEVDPVLTVEEKYPYMVEWWTK 96 (277)
T ss_pred EEeeccCccceeeecCCCCCCcchHhHHhhCCCCC---H----HHHHHHHHHHhhccceecCCCCChHHhhhHHHHHHHH
Confidence 488899999998642 11223333444432211 1 22223333333333333333333 2344443
Q ss_pred HHHHHHHHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcc
Q 039449 79 CVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTE 158 (253)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~ 158 (253)
...++...++ +.+.+...+.. ..+.+.||+.++++.|+++|++++|+|++....++..++.+|+.. .
T Consensus 97 -~~~l~~~~~~--~~e~i~~~v~~--------~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~--~ 163 (277)
T TIGR01544 97 -SHGLLVQQAF--PKAKIKEIVAE--------SDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYH--P 163 (277)
T ss_pred -HHHHHhcCCC--CHHHHHHHHhh--------cCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCC--c
Confidence 3334433333 44554444332 235889999999999999999999999999999999999999864 3
Q ss_pred eeEe------eeccccCccCCCH---------HHHHHHHHHhC-CCCCCceEEEcCCcccchhhhhhc
Q 039449 159 WDFG------VFSGLEGVEKPDP---------RIYEIALERAG-NIAPEEALHIGDSFRKDYVPAKSV 210 (253)
Q Consensus 159 f~~~------~~~~~~~~~kp~~---------~~~~~~~~~~~-~~~~~~~~~iGD~~~~Di~~a~~~ 210 (253)
+..+ +..+..-.++|.| ..++.+.+.++ ..++++|++|||+. +|+.||.-+
T Consensus 164 ~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~-~Dl~ma~g~ 230 (277)
T TIGR01544 164 NVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQ-GDLRMADGV 230 (277)
T ss_pred CceEEeeeEEECCCCeEeCCCCCcccccccHHHHHHHHHHHhCccCCcceEEEECcCh-hhhhHhcCC
Confidence 3332 2122222235554 45555676765 25788999999999 999998776
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >COG4229 Predicted enolase-phosphatase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.3e-12 Score=88.69 Aligned_cols=120 Identities=19% Similarity=0.254 Sum_probs=91.6
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcC---CCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCC
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALG---VNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIA 189 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~g---l~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~ 189 (253)
..+||++.+.+++.++.|++++|.|.++...+..+..+.. +.. +|..- +.. ....|-...-|.++++..| ++
T Consensus 102 ahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~--lfsGy-fDt-tiG~KrE~~SY~kIa~~iG-l~ 176 (229)
T COG4229 102 AHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNS--LFSGY-FDT-TIGKKRESQSYAKIAGDIG-LP 176 (229)
T ss_pred cccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHh--hhcce-eec-cccccccchhHHHHHHhcC-CC
Confidence 4789999999999999999999999999988877665542 333 44432 211 2224666788999999999 99
Q ss_pred CCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHH
Q 039449 190 PEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLV 240 (253)
Q Consensus 190 ~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~ 240 (253)
|.+++|+.|++ +.+.+|+.+|+.++.+.|++..+... ..+..++.|+.
T Consensus 177 p~eilFLSDn~-~EL~AA~~vGl~t~l~~R~g~~P~~d--~~~~~~~~sf~ 224 (229)
T COG4229 177 PAEILFLSDNP-EELKAAAGVGLATGLAVRPGNAPVPD--GQGFLVYKSFE 224 (229)
T ss_pred chheEEecCCH-HHHHHHHhcchheeeeecCCCCCCCC--CcCceeeechh
Confidence 99999999999 89999999999999999766443322 22335666665
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.3e-12 Score=91.72 Aligned_cols=94 Identities=13% Similarity=0.182 Sum_probs=73.5
Q ss_pred CCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCc------------cCCCHHHHH
Q 039449 112 PYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGV------------EKPDPRIYE 179 (253)
Q Consensus 112 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~------------~kp~~~~~~ 179 (253)
+.++.||+++++..|+++|.+++++|++....+..+..++|++....+...+..+..|. +--|++.+.
T Consensus 86 k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i~ 165 (227)
T KOG1615|consen 86 KPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVIA 165 (227)
T ss_pred CCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHHH
Confidence 45888999999999999999999999999999999999999985333433333322221 234667777
Q ss_pred HHHHHhCCCCCCceEEEcCCcccchhhhhh
Q 039449 180 IALERAGNIAPEEALHIGDSFRKDYVPAKS 209 (253)
Q Consensus 180 ~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~ 209 (253)
.+.+ + .+.+.++||||.. ||+++..-
T Consensus 166 ~lrk--~-~~~~~~~mvGDGa-tDlea~~p 191 (227)
T KOG1615|consen 166 LLRK--N-YNYKTIVMVGDGA-TDLEAMPP 191 (227)
T ss_pred HHHh--C-CChheeEEecCCc-cccccCCc
Confidence 7666 6 7788999999999 99987665
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.45 E-value=3e-12 Score=91.72 Aligned_cols=207 Identities=14% Similarity=0.192 Sum_probs=130.8
Q ss_pred CceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHH
Q 039449 6 RLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFV 85 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (253)
+--+++||+|-||++.++.- .+...++... ...+.+..+ ....|.+++.+.+.
T Consensus 12 ~ril~~FDFD~TIid~dSD~-----wVv~~lp~~~-l~~qL~~t~---------------------p~~~Wne~M~rv~k 64 (256)
T KOG3120|consen 12 PRILLVFDFDRTIIDQDSDN-----WVVDELPTTD-LFNQLRDTY---------------------PKGFWNELMDRVFK 64 (256)
T ss_pred CcEEEEEecCceeecCCcch-----HHHHhcccch-hHHHHHHhc---------------------ccchHHHHHHHHHH
Confidence 45689999999999976521 1223333321 112222111 12345566676666
Q ss_pred HcCCC-CChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcC-CEEEEEeCCCcchhhhhhhhcCCCCCcceeEee
Q 039449 86 RAGYD-YDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKG-LIVGIISNAEYRYQDVILPALGVNQGTEWDFGV 163 (253)
Q Consensus 86 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g-~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~ 163 (253)
.++.. .+.+++.+.++. +++.||+.++++.+++.| +.+.|+|..+..+++.+++.+|+.+ .|..++
T Consensus 65 ~Lheqgv~~~~ik~~~r~----------iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d--~F~~If 132 (256)
T KOG3120|consen 65 ELHEQGVRIAEIKQVLRS----------IPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHD--LFSEIF 132 (256)
T ss_pred HHHHcCCCHHHHHHHHhc----------CCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHH--HHHHHh
Confidence 66532 344555554443 478899999999999988 4999999999999999999999988 777655
Q ss_pred eccc----cCc-------------cCC----CHHHHHHHH-HHh--CCCCCCceEEEcCCcccchhhhhhcCCeEEEEcC
Q 039449 164 FSGL----EGV-------------EKP----DPRIYEIAL-ERA--GNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDR 219 (253)
Q Consensus 164 ~~~~----~~~-------------~kp----~~~~~~~~~-~~~--~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~ 219 (253)
+-.. .|. .=| |...+..+. +.+ | +..++.+||||+. ||+......-..-+...+
T Consensus 133 TNPa~~da~G~L~v~pyH~~hsC~~CPsNmCKg~Vl~~~~~s~~~~g-v~yer~iYvGDG~-nD~CP~l~Lr~~D~ampR 210 (256)
T KOG3120|consen 133 TNPACVDASGRLLVRPYHTQHSCNLCPSNMCKGLVLDELVASQLKDG-VRYERLIYVGDGA-NDFCPVLRLRACDVAMPR 210 (256)
T ss_pred cCCcccCCCCcEEeecCCCCCccCcCchhhhhhHHHHHHHHHHhhcC-CceeeEEEEcCCC-CCcCcchhcccCceeccc
Confidence 4211 110 011 122222222 222 4 7778999999999 999988777666666666
Q ss_pred CCCCChhhhhhcC------CcccCCHHHHHHHHhhhhhcC
Q 039449 220 FKTPDAKEWRKSG------AIVLPDLVAVKEFLTSEISAC 253 (253)
Q Consensus 220 ~~~~~~~~~~~~~------~~~i~~l~el~~~l~~~~~~~ 253 (253)
.+.+-.......+ .....|-.++...|.+.+++|
T Consensus 211 kgfpl~k~~~~~p~~~kasV~~W~sg~d~~~~L~~lik~~ 250 (256)
T KOG3120|consen 211 KGFPLWKLISANPMLLKASVLEWSSGEDLERILQQLIKTI 250 (256)
T ss_pred CCCchHhhhhcCcceeeeeEEecccHHHHHHHHHHHHHHh
Confidence 6766554433332 235567778888777766543
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.43 E-value=2e-13 Score=103.43 Aligned_cols=99 Identities=19% Similarity=0.108 Sum_probs=66.0
Q ss_pred EEEEeCCCcchhhhhhhhcCCCCCccee-EeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcC
Q 039449 133 VGIISNAEYRYQDVILPALGVNQGTEWD-FGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVG 211 (253)
Q Consensus 133 ~~i~s~~~~~~~~~~l~~~gl~~~~~f~-~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G 211 (253)
..+.+....+.....++.++... .+. .....+......+|..++..+++.++ ++++++++|||+. ||+.|++.+|
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~-i~~~~~i~~GD~~-NDi~m~~~ag 185 (225)
T TIGR01482 110 VKMRYGIDVDTVREIIKELGLNL--VAVDSGFDIHILPQGVNKGVAVKKLKEKLG-IKPGETLVCGDSE-NDIDLFEVPG 185 (225)
T ss_pred EEEeecCCHHHHHHHHHhcCceE--EEecCCcEEEEeeCCCCHHHHHHHHHHHhC-CCHHHEEEECCCH-hhHHHHHhcC
Confidence 34444445555566666665431 110 01112223445678899999999999 9999999999999 9999999999
Q ss_pred CeEEEEcCCCCCChhhhhhcCCcccCCHH
Q 039449 212 MHALLVDRFKTPDAKEWRKSGAIVLPDLV 240 (253)
Q Consensus 212 ~~~i~~~~~~~~~~~~~~~~~~~~i~~l~ 240 (253)
+..++-+. .+.+++..+++.++-.
T Consensus 186 ~~vam~Na-----~~~~k~~A~~vt~~~~ 209 (225)
T TIGR01482 186 FGVAVANA-----QPELKEWADYVTESPY 209 (225)
T ss_pred ceEEcCCh-----hHHHHHhcCeecCCCC
Confidence 99888662 2344555666655433
|
catalyze the same reaction as SPP. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.42 E-value=3.2e-12 Score=99.47 Aligned_cols=77 Identities=10% Similarity=-0.008 Sum_probs=54.8
Q ss_pred CCHHHHHHHHHHhCCCCC-CceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcC-Cccc--CC--HHHHHHHH
Q 039449 173 PDPRIYEIALERAGNIAP-EEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSG-AIVL--PD--LVAVKEFL 246 (253)
Q Consensus 173 p~~~~~~~~~~~~~~~~~-~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~-~~~i--~~--l~el~~~l 246 (253)
.|..+++.+++.++ +++ +++++|||+. ||+.|++.+|+.+++-+...... +.+.... ..+. .+ =+.+...|
T Consensus 190 ~Kg~al~~l~~~~~-i~~~~~v~~~GDs~-NDi~m~~~ag~~vam~NA~~~~k-~~~~~~a~~~v~~~~~~~~~Gv~~~l 266 (273)
T PRK00192 190 DKGKAVRWLKELYR-RQDGVETIALGDSP-NDLPMLEAADIAVVVPGPDGPNP-PLLPGIADGEFILASAPGPEGWAEAI 266 (273)
T ss_pred CHHHHHHHHHHHHh-ccCCceEEEEcCCh-hhHHHHHhCCeeEEeCCCCCCCc-ccCccccCCceEEecCCCcHHHHHHH
Confidence 56789999999999 999 9999999999 99999999999999988432221 1111222 2333 22 34567777
Q ss_pred hhhhhc
Q 039449 247 TSEISA 252 (253)
Q Consensus 247 ~~~~~~ 252 (253)
++.++.
T Consensus 267 ~~~~~~ 272 (273)
T PRK00192 267 NKLLSK 272 (273)
T ss_pred HHHHhh
Confidence 766553
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.42 E-value=4e-12 Score=105.13 Aligned_cols=95 Identities=18% Similarity=0.143 Sum_probs=75.9
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCc
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEE 192 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 192 (253)
.++.|++.+++++++++|++++++|+.....++.+++++|+ |+.++.++.....||++.. ..+.+.++ .++
T Consensus 71 lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl-----Fd~Vigsd~~~~~kg~~K~-~~l~~~l~---~~~ 141 (479)
T PRK08238 71 LPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL-----FDGVFASDGTTNLKGAAKA-AALVEAFG---ERG 141 (479)
T ss_pred CCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC-----CCEEEeCCCccccCCchHH-HHHHHHhC---ccC
Confidence 35679999999999999999999999999999999999986 5666666665555554432 23445555 356
Q ss_pred eEEEcCCcccchhhhhhcCCeEEEEc
Q 039449 193 ALHIGDSFRKDYVPAKSVGMHALLVD 218 (253)
Q Consensus 193 ~~~iGD~~~~Di~~a~~~G~~~i~~~ 218 (253)
+.++||+. +|+.+++.+| ..+.|+
T Consensus 142 ~~yvGDS~-~Dlp~~~~A~-~av~Vn 165 (479)
T PRK08238 142 FDYAGNSA-ADLPVWAAAR-RAIVVG 165 (479)
T ss_pred eeEecCCH-HHHHHHHhCC-CeEEEC
Confidence 89999999 9999999999 667777
|
|
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.1e-12 Score=94.42 Aligned_cols=102 Identities=18% Similarity=0.214 Sum_probs=77.2
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcch---------------hhhhhhhcCCCCCcceeEeee-----cc------c
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRY---------------QDVILPALGVNQGTEWDFGVF-----SG------L 167 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~---------------~~~~l~~~gl~~~~~f~~~~~-----~~------~ 167 (253)
.+.|....++.+|++.|++++|+|-.+... ++..++..+-+. ..+.++. .. .
T Consensus 75 ~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~--~i~~~~~yyp~~w~~p~~y~~ 152 (219)
T PTZ00445 75 SVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDF--KIKKVYAYYPKFWQEPSDYRP 152 (219)
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccc--eeeeeeeeCCcccCChhhhhh
Confidence 345677889999999999999999887743 334444333322 2222221 11 1
Q ss_pred cCccCCCHHH--H--HHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcC
Q 039449 168 EGVEKPDPRI--Y--EIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDR 219 (253)
Q Consensus 168 ~~~~kp~~~~--~--~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~ 219 (253)
.+..||+|.. | +.+++++| ++|++++||+|+. .++++|+++|+.++.+.+
T Consensus 153 ~gl~KPdp~iK~yHle~ll~~~g-l~peE~LFIDD~~-~NVeaA~~lGi~ai~f~~ 206 (219)
T PTZ00445 153 LGLDAPMPLDKSYHLKQVCSDFN-VNPDEILFIDDDM-NNCKNALKEGYIALHVTG 206 (219)
T ss_pred hcccCCCccchHHHHHHHHHHcC-CCHHHeEeecCCH-HHHHHHHHCCCEEEEcCC
Confidence 2455999999 8 99999999 9999999999999 799999999999999974
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.40 E-value=4.1e-13 Score=90.98 Aligned_cols=84 Identities=21% Similarity=0.382 Sum_probs=72.9
Q ss_pred HHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcc
Q 039449 122 FLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFR 201 (253)
Q Consensus 122 ~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~ 201 (253)
-++.|.+.|++++|+|+.....++...+.+|+.. ++-+ .+.|..+++.++++++ ++++++.||||..
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~-------~~qG----~~dK~~a~~~L~~~~~-l~~e~~ayiGDD~- 109 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH-------LYQG----ISDKLAAFEELLKKLN-LDPEEVAYVGDDL- 109 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce-------eeec----hHhHHHHHHHHHHHhC-CCHHHhhhhcCcc-
Confidence 4667788999999999999999999999999986 2222 2346689999999999 9999999999999
Q ss_pred cchhhhhhcCCeEEEEc
Q 039449 202 KDYVPAKSVGMHALLVD 218 (253)
Q Consensus 202 ~Di~~a~~~G~~~i~~~ 218 (253)
+|+....++|.+++..+
T Consensus 110 ~Dlpvm~~vGls~a~~d 126 (170)
T COG1778 110 VDLPVMEKVGLSVAVAD 126 (170)
T ss_pred ccHHHHHHcCCcccccc
Confidence 99999999999987655
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=99.39 E-value=8e-11 Score=87.64 Aligned_cols=121 Identities=12% Similarity=0.021 Sum_probs=76.0
Q ss_pred ChHHHHHHHHHHHHHhCCCCCCccCCChHHHHH-HHHHcCCEEEEEeCCCcchhhhhhhhcCCCCC-cceeEeeeccccC
Q 039449 92 DEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLR-WAREKGLIVGIISNAEYRYQDVILPALGVNQG-TEWDFGVFSGLEG 169 (253)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~-~~f~~~~~~~~~~ 169 (253)
+.+++.+....+...... ...++|++.+.|+ .++++|++++|+||.....++.+.+..++... ...-..+.....|
T Consensus 74 ~~~~l~~~~~~f~~~~~~--~~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~~i~t~le~~~gg 151 (210)
T TIGR01545 74 REAHLQDLEADFVAAFRD--KVTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLNLIASQIERGNGG 151 (210)
T ss_pred CHHHHHHHHHHHHHHHHH--hCCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCcEEEEEeEEeCCc
Confidence 455555555555444332 1367999999996 78889999999999999999988877554220 0111111110101
Q ss_pred c--cC--CCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEE
Q 039449 170 V--EK--PDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALL 216 (253)
Q Consensus 170 ~--~k--p~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~ 216 (253)
. +. -..+-...+-+.++ .+.+.+.+.|||. +|+.+...+|-+.+.
T Consensus 152 ~~~g~~c~g~~Kv~rl~~~~~-~~~~~~~aYsDS~-~D~pmL~~a~~~~~V 200 (210)
T TIGR01545 152 WVLPLRCLGHEKVAQLEQKIG-SPLKLYSGYSDSK-QDNPLLAFCEHRWRV 200 (210)
T ss_pred eEcCccCCChHHHHHHHHHhC-CChhheEEecCCc-ccHHHHHhCCCcEEE
Confidence 1 01 11222333444456 5677889999999 999999999977543
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.8e-12 Score=98.47 Aligned_cols=48 Identities=42% Similarity=0.659 Sum_probs=44.8
Q ss_pred ccCCCHHHHHHHHHHhCCCCCCce-EEEcCCcccchhhhhhcCCeEEEEc
Q 039449 170 VEKPDPRIYEIALERAGNIAPEEA-LHIGDSFRKDYVPAKSVGMHALLVD 218 (253)
Q Consensus 170 ~~kp~~~~~~~~~~~~~~~~~~~~-~~iGD~~~~Di~~a~~~G~~~i~~~ 218 (253)
..||++..++.++++++ ++++++ +||||++.+|+.+|+++|++++++.
T Consensus 186 ~~KP~~~~~~~~~~~~~-~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~ 234 (236)
T TIGR01460 186 VGKPSPAIYRAALNLLQ-ARPERRDVMVGDNLRTDILGAKNAGFDTLLVL 234 (236)
T ss_pred ecCCCHHHHHHHHHHhC-CCCccceEEECCCcHHHHHHHHHCCCcEEEEe
Confidence 56999999999999999 998887 9999998679999999999999997
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=99.38 E-value=3.6e-13 Score=95.31 Aligned_cols=98 Identities=19% Similarity=0.349 Sum_probs=71.0
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeC-CCcchhhhhhhhcCCC----------CCcceeEeeeccccCccCCCHHHHHHH
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISN-AEYRYQDVILPALGVN----------QGTEWDFGVFSGLEGVEKPDPRIYEIA 181 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~-~~~~~~~~~l~~~gl~----------~~~~f~~~~~~~~~~~~kp~~~~~~~~ 181 (253)
+.+||++.++|+.|+.+|++++++|- .....++..|+.+++. . +|+..-+.. ..|..-|+.+
T Consensus 44 v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~--~F~~~eI~~-----gsK~~Hf~~i 116 (169)
T PF12689_consen 44 VSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIE--YFDYLEIYP-----GSKTTHFRRI 116 (169)
T ss_dssp E---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------C--CECEEEESS-----S-HHHHHHHH
T ss_pred EEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchh--hcchhheec-----CchHHHHHHH
Confidence 58899999999999999999999994 5566789999999998 6 555533322 2677899999
Q ss_pred HHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcC
Q 039449 182 LERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDR 219 (253)
Q Consensus 182 ~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~ 219 (253)
.+..| ++.++++||+|.. .++....+.|+.++++.+
T Consensus 117 ~~~tg-I~y~eMlFFDDe~-~N~~~v~~lGV~~v~v~~ 152 (169)
T PF12689_consen 117 HRKTG-IPYEEMLFFDDES-RNIEVVSKLGVTCVLVPD 152 (169)
T ss_dssp HHHH----GGGEEEEES-H-HHHHHHHTTT-EEEE-SS
T ss_pred HHhcC-CChhHEEEecCch-hcceeeEecCcEEEEeCC
Confidence 99999 9999999999999 789999999999999984
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.7e-12 Score=90.45 Aligned_cols=90 Identities=23% Similarity=0.290 Sum_probs=65.8
Q ss_pred CChHHHHHHHHHcCC--EEEEEeCCC-------cchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCC
Q 039449 117 PDSQPFLRWAREKGL--IVGIISNAE-------YRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGN 187 (253)
Q Consensus 117 ~~~~~~l~~l~~~g~--~~~i~s~~~-------~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~ 187 (253)
|.+.+.++++++.+. +++|+||+. ...++.+-+.+|+.- .... ..|| ..+..+++.++
T Consensus 62 ~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpv--------l~h~--~kKP--~~~~~i~~~~~- 128 (168)
T PF09419_consen 62 PEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPV--------LRHR--AKKP--GCFREILKYFK- 128 (168)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcE--------EEeC--CCCC--ccHHHHHHHHh-
Confidence 344455666767654 599999983 455666777788763 1111 3455 56667777775
Q ss_pred C-----CCCceEEEcCCcccchhhhhhcCCeEEEEcC
Q 039449 188 I-----APEEALHIGDSFRKDYVPAKSVGMHALLVDR 219 (253)
Q Consensus 188 ~-----~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~ 219 (253)
. +++++++|||.+.+|+.+|+..|+.+|++..
T Consensus 129 ~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~ 165 (168)
T PF09419_consen 129 CQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTD 165 (168)
T ss_pred hccCCCCchhEEEEcchHHHHHHHhhccCceEEEEec
Confidence 4 4999999999999999999999999999983
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.36 E-value=8.6e-13 Score=99.14 Aligned_cols=96 Identities=20% Similarity=0.120 Sum_probs=64.5
Q ss_pred EEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCC
Q 039449 133 VGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGM 212 (253)
Q Consensus 133 ~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~ 212 (253)
+++.+......+...++..++.. +... ...+....+..|..+++.+++.++ ++++++++|||+. ||+.|++.+|+
T Consensus 110 ~~~~~~~~~~~~~~~l~~~~~~~--~~~~-~~~ei~~~~~~K~~~i~~l~~~~~-i~~~~~i~iGDs~-ND~~ml~~ag~ 184 (215)
T TIGR01487 110 VIMREGKDVDEVREIIKERGLNL--VDSG-FAIHIMKKGVDKGVGVEKLKELLG-IKPEEVAAIGDSE-NDIDLFRVVGF 184 (215)
T ss_pred EEecCCccHHHHHHHHHhCCeEE--EecC-ceEEEecCCCChHHHHHHHHHHhC-CCHHHEEEECCCH-HHHHHHHhCCC
Confidence 34445545455555666655543 2111 111222334567789999999999 9999999999999 99999999999
Q ss_pred eEEEEcCCCCCChhhhhhcCCcccCC
Q 039449 213 HALLVDRFKTPDAKEWRKSGAIVLPD 238 (253)
Q Consensus 213 ~~i~~~~~~~~~~~~~~~~~~~~i~~ 238 (253)
..++-+. .+.+....++++++
T Consensus 185 ~vam~na-----~~~~k~~A~~v~~~ 205 (215)
T TIGR01487 185 KVAVANA-----DDQLKEIADYVTSN 205 (215)
T ss_pred eEEcCCc-----cHHHHHhCCEEcCC
Confidence 9888763 34445555656553
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.9e-12 Score=99.48 Aligned_cols=74 Identities=12% Similarity=0.152 Sum_probs=57.2
Q ss_pred ccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCC--cccCCHHH--HHHH
Q 039449 170 VEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGA--IVLPDLVA--VKEF 245 (253)
Q Consensus 170 ~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~--~~i~~l~e--l~~~ 245 (253)
..-.|..+++.+++.+| ++++++++|||+. ||+.|.+.+|.+.++-+. .+.+++..+ +++++-+| +..+
T Consensus 187 ~gvsKg~al~~l~~~lg-i~~~~viafGD~~-NDi~Ml~~ag~~vAm~NA-----~~~vK~~A~~~~v~~~n~edGVa~~ 259 (266)
T PRK10976 187 GGVSKGHALEAVAKKLG-YSLKDCIAFGDGM-NDAEMLSMAGKGCIMGNA-----HQRLKDLLPELEVIGSNADDAVPHY 259 (266)
T ss_pred CCCChHHHHHHHHHHcC-CCHHHeEEEcCCc-ccHHHHHHcCCCeeecCC-----cHHHHHhCCCCeecccCchHHHHHH
Confidence 34567899999999999 9999999999999 999999999999888763 234444443 45665544 6666
Q ss_pred Hhhhh
Q 039449 246 LTSEI 250 (253)
Q Consensus 246 l~~~~ 250 (253)
|++.+
T Consensus 260 l~~~~ 264 (266)
T PRK10976 260 LRKLY 264 (266)
T ss_pred HHHHh
Confidence 66543
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.2e-11 Score=93.79 Aligned_cols=83 Identities=10% Similarity=-0.032 Sum_probs=59.9
Q ss_pred cCccCCCHHHHHHHHHHhCCC---CCCceEEEcCCcccchhhhhhcCCeEEEEcCCCC-CChhhhhhcCCcccCC--HHH
Q 039449 168 EGVEKPDPRIYEIALERAGNI---APEEALHIGDSFRKDYVPAKSVGMHALLVDRFKT-PDAKEWRKSGAIVLPD--LVA 241 (253)
Q Consensus 168 ~~~~kp~~~~~~~~~~~~~~~---~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~-~~~~~~~~~~~~~i~~--l~e 241 (253)
....-.|..+++.+++.+| + ++++++.|||+. ||+.|.+.+|.+.++-+.... ...+......+++... -+.
T Consensus 182 ~~~g~sKg~al~~l~~~lg-i~~~~~~~viafGDs~-NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g 259 (271)
T PRK03669 182 LDASAGKDQAANWLIATYQ-QLSGTRPTTLGLGDGP-NDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEG 259 (271)
T ss_pred ecCCCCHHHHHHHHHHHHH-hhcCCCceEEEEcCCH-HHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHH
Confidence 3445678899999999999 9 999999999999 999999999999988752111 1122222234444443 346
Q ss_pred HHHHHhhhhhc
Q 039449 242 VKEFLTSEISA 252 (253)
Q Consensus 242 l~~~l~~~~~~ 252 (253)
+.+.|++.+++
T Consensus 260 ~~~~l~~~~~~ 270 (271)
T PRK03669 260 WREGLDHFFSA 270 (271)
T ss_pred HHHHHHHHHhc
Confidence 77888777665
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.2e-11 Score=91.30 Aligned_cols=89 Identities=22% Similarity=0.338 Sum_probs=63.9
Q ss_pred CChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccc----cCc-cC----CCHHHHHHH---HHH
Q 039449 117 PDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGL----EGV-EK----PDPRIYEIA---LER 184 (253)
Q Consensus 117 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~----~~~-~k----p~~~~~~~~---~~~ 184 (253)
|++.++++.++++|++++|+|++....++.+++.+|++....+...+.... .+. .. .|...++.+ ...
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~ 171 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIRDEE 171 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHHhhc
Confidence 555599999999999999999999999999999999886222222221100 000 01 156666666 444
Q ss_pred hCCCCCCceEEEcCCcccchhhhh
Q 039449 185 AGNIAPEEALHIGDSFRKDYVPAK 208 (253)
Q Consensus 185 ~~~~~~~~~~~iGD~~~~Di~~a~ 208 (253)
+ .+.+.+++|||+. +|+.+++
T Consensus 172 -~-~~~~~~~~iGDs~-~D~~~lr 192 (192)
T PF12710_consen 172 -D-IDPDRVIAIGDSI-NDLPMLR 192 (192)
T ss_dssp -T-HTCCEEEEEESSG-GGHHHHH
T ss_pred -C-CCCCeEEEEECCH-HHHHHhC
Confidence 7 8899999999999 9999875
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.4e-11 Score=92.65 Aligned_cols=85 Identities=18% Similarity=0.200 Sum_probs=64.6
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcch---hhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCC
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRY---QDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIA 189 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~---~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~ 189 (253)
..++||+.+++++++++|++++++||..... ....++.+|+.. ..++.++.-. . .++|+.....+.+.++ +
T Consensus 117 a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~-~~~d~lllr~-~--~~~K~~rr~~I~~~y~-I- 190 (266)
T TIGR01533 117 AKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQ-ADEEHLLLKK-D--KSSKESRRQKVQKDYE-I- 190 (266)
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCC-CCcceEEeCC-C--CCCcHHHHHHHHhcCC-E-
Confidence 4788999999999999999999999998554 346778889875 1234444433 2 2466777777777777 5
Q ss_pred CCceEEEcCCcccchhhh
Q 039449 190 PEEALHIGDSFRKDYVPA 207 (253)
Q Consensus 190 ~~~~~~iGD~~~~Di~~a 207 (253)
+++|||+. +|+..+
T Consensus 191 ---vl~vGD~~-~Df~~~ 204 (266)
T TIGR01533 191 ---VLLFGDNL-LDFDDF 204 (266)
T ss_pred ---EEEECCCH-HHhhhh
Confidence 89999999 899653
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=99.31 E-value=7.7e-12 Score=88.64 Aligned_cols=94 Identities=24% Similarity=0.304 Sum_probs=66.3
Q ss_pred CCChHHHHHHHHHcCCEEEEEeCCCcc--------------hhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHH
Q 039449 116 FPDSQPFLRWAREKGLIVGIISNAEYR--------------YQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIA 181 (253)
Q Consensus 116 ~~~~~~~l~~l~~~g~~~~i~s~~~~~--------------~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~ 181 (253)
.|++.+.|++|.+.|+.++|+||.... .+..+++.+++.- ...+.......+||.+-++..+
T Consensus 31 ~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip~----~~~~a~~~d~~RKP~~GM~~~~ 106 (159)
T PF08645_consen 31 PPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIPI----QVYAAPHKDPCRKPNPGMWEFA 106 (159)
T ss_dssp -TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS-E----EEEECGCSSTTSTTSSHHHHHH
T ss_pred chhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCce----EEEecCCCCCCCCCchhHHHHH
Confidence 358999999999999999999998332 1335556666652 2222233345789999999999
Q ss_pred HHHhCC---CCCCceEEEcCC-----------cccchhhhhhcCCeE
Q 039449 182 LERAGN---IAPEEALHIGDS-----------FRKDYVPAKSVGMHA 214 (253)
Q Consensus 182 ~~~~~~---~~~~~~~~iGD~-----------~~~Di~~a~~~G~~~ 214 (253)
++.++. ++.++++||||. - +|..-|.++|++.
T Consensus 107 ~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~-~D~~fA~N~gi~f 152 (159)
T PF08645_consen 107 LKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSD-SDRKFALNCGIKF 152 (159)
T ss_dssp CCCTSTT--S-CCC-EEEESSCHCTB-S--S---HHHHHHHHHT--E
T ss_pred HHhccccccccccceEEEeccCCCCCcccccCh-hHHHHHHHcCCcc
Confidence 999872 489999999996 4 7899999999984
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.28 E-value=9.3e-12 Score=96.55 Aligned_cols=75 Identities=19% Similarity=0.150 Sum_probs=56.5
Q ss_pred CccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHH--HHHHHH
Q 039449 169 GVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLV--AVKEFL 246 (253)
Q Consensus 169 ~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~--el~~~l 246 (253)
..+..|..+++.+++.++ ++++++++|||+. ||+.|.+.+|.+.++-+. .+.+....+++..+-+ .+...|
T Consensus 185 ~~g~~K~~al~~l~~~lg-i~~~~v~afGD~~-ND~~Ml~~ag~gvam~Na-----~~~~k~~A~~vt~~n~~~Gv~~~l 257 (264)
T COG0561 185 PKGVSKGYALQRLAKLLG-IKLEEVIAFGDST-NDIEMLEVAGLGVAMGNA-----DEELKELADYVTTSNDEDGVAEAL 257 (264)
T ss_pred cCCCchHHHHHHHHHHhC-CCHHHeEEeCCcc-ccHHHHHhcCeeeeccCC-----CHHHHhhCCcccCCccchHHHHHH
Confidence 345678899999999999 9999999999999 999999999999998763 2333444444444333 466666
Q ss_pred hhhh
Q 039449 247 TSEI 250 (253)
Q Consensus 247 ~~~~ 250 (253)
++.+
T Consensus 258 ~~~~ 261 (264)
T COG0561 258 EKLL 261 (264)
T ss_pred HHHh
Confidence 6543
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=6.2e-12 Score=97.95 Aligned_cols=75 Identities=17% Similarity=0.201 Sum_probs=56.3
Q ss_pred CccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCc--ccCCHHH--HHH
Q 039449 169 GVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAI--VLPDLVA--VKE 244 (253)
Q Consensus 169 ~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~--~i~~l~e--l~~ 244 (253)
..+-.|..+++.+++.+| ++++++++|||+. ||+.|.+.+|...++-+. .+.++...++ ++++.+| +..
T Consensus 184 ~~g~sKg~al~~l~~~~g-i~~~~v~afGD~~-NDi~Ml~~ag~~vAm~Na-----~~~vK~~A~~~~v~~~n~edGva~ 256 (272)
T PRK15126 184 PVGCNKGAALAVLSQHLG-LSLADCMAFGDAM-NDREMLGSVGRGFIMGNA-----MPQLRAELPHLPVIGHCRNQAVSH 256 (272)
T ss_pred cCCCChHHHHHHHHHHhC-CCHHHeEEecCCH-HHHHHHHHcCCceeccCC-----hHHHHHhCCCCeecCCCcchHHHH
Confidence 344578899999999999 9999999999999 999999999999888762 3344444432 5555443 566
Q ss_pred HHhhhh
Q 039449 245 FLTSEI 250 (253)
Q Consensus 245 ~l~~~~ 250 (253)
+|++.+
T Consensus 257 ~l~~~~ 262 (272)
T PRK15126 257 YLTHWL 262 (272)
T ss_pred HHHHHh
Confidence 665543
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.4e-11 Score=91.70 Aligned_cols=45 Identities=9% Similarity=0.065 Sum_probs=39.8
Q ss_pred ccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEE
Q 039449 170 VEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALL 216 (253)
Q Consensus 170 ~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~ 216 (253)
..-.|+.+++.+++.+| ++++++++|||+. ||+.|.+.+|.+.+.
T Consensus 176 ~~~~Kg~al~~l~~~lg-i~~~~vi~~GD~~-NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 176 ASSSKGKAANWLKATYN-QPDVKTLGLGDGP-NDLPLLEVADYAVVI 220 (221)
T ss_pred CCCCHHHHHHHHHHHhC-CCCCcEEEECCCH-HHHHHHHhCCceEEe
Confidence 33456778999999999 9999999999999 999999999988764
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.26 E-value=4.9e-10 Score=78.22 Aligned_cols=126 Identities=13% Similarity=0.117 Sum_probs=85.2
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeecc------------------ccCccCCC
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSG------------------LEGVEKPD 174 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~------------------~~~~~kp~ 174 (253)
+.+.||.++++..+++++++++++|++...++..+++..+-..-.+.-. +.++ ..|..||
T Consensus 72 i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~id-i~sn~~~ih~dg~h~i~~~~ds~fG~dK~- 149 (220)
T COG4359 72 IKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCID-IVSNNDYIHIDGQHSIKYTDDSQFGHDKS- 149 (220)
T ss_pred cccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeE-EeecCceEcCCCceeeecCCccccCCCcc-
Confidence 4788999999999999999999999999999998888775211001111 1111 1223344
Q ss_pred HHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHHHHHHhhhh
Q 039449 175 PRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKEFLTSEI 250 (253)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~~~l~~~~ 250 (253)
..++.+. -+++.++|+||+. +|+.+|+.+..-.+--. --..-..+......++++.|+..-+++.+
T Consensus 150 -----~vI~~l~-e~~e~~fy~GDsv-sDlsaaklsDllFAK~~---L~nyc~eqn~~f~~fe~F~eIlk~iekvl 215 (220)
T COG4359 150 -----SVIHELS-EPNESIFYCGDSV-SDLSAAKLSDLLFAKDD---LLNYCREQNLNFLEFETFYEILKEIEKVL 215 (220)
T ss_pred -----hhHHHhh-cCCceEEEecCCc-ccccHhhhhhhHhhHHH---HHHHHHHcCCCCcccccHHHHHHHHHHHH
Confidence 4566666 6778899999999 89999999876543110 00011112334578888999888887765
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.5e-11 Score=95.66 Aligned_cols=74 Identities=18% Similarity=0.155 Sum_probs=58.5
Q ss_pred CccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHH--HHHHH
Q 039449 169 GVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVA--VKEFL 246 (253)
Q Consensus 169 ~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~e--l~~~l 246 (253)
..+-.|..+++.+++.+| ++++++++|||+. ||++|.+.+|.+.++-+. .+.+....++++++-++ +..+|
T Consensus 192 ~~gvsKg~al~~l~~~~g-i~~~~v~afGD~~-NDi~Ml~~ag~~vAm~NA-----~~~vK~~A~~vt~~n~~dGva~~i 264 (270)
T PRK10513 192 DKRVNKGTGVKSLAEHLG-IKPEEVMAIGDQE-NDIAMIEYAGVGVAMGNA-----IPSVKEVAQFVTKSNLEDGVAFAI 264 (270)
T ss_pred CCCCChHHHHHHHHHHhC-CCHHHEEEECCch-hhHHHHHhCCceEEecCc-----cHHHHHhcCeeccCCCcchHHHHH
Confidence 445678899999999999 9999999999999 999999999999888763 34455666677765543 55665
Q ss_pred hhh
Q 039449 247 TSE 249 (253)
Q Consensus 247 ~~~ 249 (253)
++.
T Consensus 265 ~~~ 267 (270)
T PRK10513 265 EKY 267 (270)
T ss_pred HHH
Confidence 543
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.1e-10 Score=96.79 Aligned_cols=73 Identities=15% Similarity=0.183 Sum_probs=57.9
Q ss_pred CccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHH--HHHHH
Q 039449 169 GVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVA--VKEFL 246 (253)
Q Consensus 169 ~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~e--l~~~l 246 (253)
..+-.|..+++.+++.+| ++++++++|||+. ||+.|.+.+|.+.++-+. .+.++...++++.+.+| +..+|
T Consensus 503 p~gvSKG~ALk~L~e~lG-I~~eeviAFGDs~-NDIeMLe~AG~gVAMgNA-----~eeVK~~Ad~VT~sNdEDGVA~aL 575 (580)
T PLN02887 503 PPGTSKGNGVKMLLNHLG-VSPDEIMAIGDGE-NDIEMLQLASLGVALSNG-----AEKTKAVADVIGVSNDEDGVADAI 575 (580)
T ss_pred cCCCCHHHHHHHHHHHcC-CCHHHEEEEecch-hhHHHHHHCCCEEEeCCC-----CHHHHHhCCEEeCCCCcCHHHHHH
Confidence 345678899999999999 9999999999999 999999999999988763 34455566667765543 55555
Q ss_pred hh
Q 039449 247 TS 248 (253)
Q Consensus 247 ~~ 248 (253)
++
T Consensus 576 ek 577 (580)
T PLN02887 576 YR 577 (580)
T ss_pred HH
Confidence 54
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.3e-10 Score=88.40 Aligned_cols=58 Identities=14% Similarity=0.115 Sum_probs=53.6
Q ss_pred CChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHH
Q 039449 117 PDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPR 176 (253)
Q Consensus 117 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~ 176 (253)
|++.++|++|+++|++++|+|++....+...++.+|+.. +|+.++++++....||+++
T Consensus 149 PgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~--YFdvIIs~Gdv~~~kp~~e 206 (301)
T TIGR01684 149 PRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR--YFDIIISGGHKAEEYSTMS 206 (301)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc--ccCEEEECCccccCCCCcc
Confidence 789999999999999999999999999999999999998 9999999988888887765
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.09 E-value=2.6e-10 Score=96.71 Aligned_cols=115 Identities=11% Similarity=0.105 Sum_probs=87.7
Q ss_pred ccCCChHHHHHHHHHcCC-EEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCc
Q 039449 114 TVFPDSQPFLRWAREKGL-IVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEE 192 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~-~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 192 (253)
.++|++.+.+++|+++|+ +++++||.....++..++.+|++. +|... . +.+| ..++++++ .+.++
T Consensus 362 ~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~--~f~~~-----~--p~~K----~~~i~~l~-~~~~~ 427 (536)
T TIGR01512 362 EPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE--VHAEL-----L--PEDK----LEIVKELR-EKYGP 427 (536)
T ss_pred cchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh--hhhcc-----C--cHHH----HHHHHHHH-hcCCE
Confidence 678999999999999999 999999999999999999999987 54322 1 1222 34666666 66789
Q ss_pred eEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCccc--CCHHHHHHHHh
Q 039449 193 ALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVL--PDLVAVKEFLT 247 (253)
Q Consensus 193 ~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i--~~l~el~~~l~ 247 (253)
++||||+. ||+.+++++|+...+-. .. .+......++++ +++.++.+++.
T Consensus 428 v~~vGDg~-nD~~al~~A~vgia~g~---~~-~~~~~~~ad~vl~~~~l~~l~~~i~ 479 (536)
T TIGR01512 428 VAMVGDGI-NDAPALAAADVGIAMGA---SG-SDVAIETADVVLLNDDLSRLPQAIR 479 (536)
T ss_pred EEEEeCCH-HHHHHHHhCCEEEEeCC---Cc-cHHHHHhCCEEEECCCHHHHHHHHH
Confidence 99999999 99999999997444421 11 222234566666 89999988775
|
. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.08 E-value=5.6e-10 Score=95.26 Aligned_cols=114 Identities=11% Similarity=0.129 Sum_probs=85.9
Q ss_pred ccCCChHHHHHHHHHcC-CEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCc
Q 039449 114 TVFPDSQPFLRWAREKG-LIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEE 192 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g-~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 192 (253)
.++||+.+++++|+++| ++++++||.....++.+++++|+.. +|..+ .. .+|+ .++++++ ..+++
T Consensus 384 ~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~--~f~~~-----~p--~~K~----~~v~~l~-~~~~~ 449 (556)
T TIGR01525 384 QLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE--VHAEL-----LP--EDKL----AIVKELQ-EEGGV 449 (556)
T ss_pred cchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe--eeccC-----CH--HHHH----HHHHHHH-HcCCE
Confidence 68899999999999999 9999999999999999999999987 55432 11 1222 4566665 56679
Q ss_pred eEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccC--CHHHHHHHHh
Q 039449 193 ALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLP--DLVAVKEFLT 247 (253)
Q Consensus 193 ~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~--~l~el~~~l~ 247 (253)
|+||||+. ||+.+++++|+...+- .. .+......++++. ++..+.++++
T Consensus 450 v~~vGDg~-nD~~al~~A~vgia~g----~~-~~~~~~~Ad~vi~~~~~~~l~~~i~ 500 (556)
T TIGR01525 450 VAMVGDGI-NDAPALAAADVGIAMG----AG-SDVAIEAADIVLLNDDLSSLPTAID 500 (556)
T ss_pred EEEEECCh-hHHHHHhhCCEeEEeC----CC-CHHHHHhCCEEEeCCCHHHHHHHHH
Confidence 99999999 9999999999554442 22 2222344665555 7888888775
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.04 E-value=2.4e-10 Score=88.26 Aligned_cols=63 Identities=16% Similarity=0.185 Sum_probs=50.2
Q ss_pred ccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCH
Q 039449 170 VEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDL 239 (253)
Q Consensus 170 ~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l 239 (253)
..-.|..+++.+++.++ ++++++++|||+. ||+.|++.+|++.++.+. .+.+.....+++++-
T Consensus 185 ~~~~K~~~i~~~~~~~~-~~~~~~~~~GD~~-nD~~m~~~~~~~~a~~na-----~~~~k~~a~~~~~~n 247 (256)
T TIGR00099 185 KGVSKGSALQSLAEALG-ISLEDVIAFGDGM-NDIEMLEAAGYGVAMGNA-----DEELKALADYVTDSN 247 (256)
T ss_pred CCCChHHHHHHHHHHcC-CCHHHEEEeCCcH-HhHHHHHhCCceeEecCc-----hHHHHHhCCEEecCC
Confidence 44678899999999999 9999999999999 999999999999887542 233444455565543
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=99.01 E-value=2.2e-09 Score=82.54 Aligned_cols=49 Identities=16% Similarity=0.184 Sum_probs=42.7
Q ss_pred cCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEc
Q 039449 168 EGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVD 218 (253)
Q Consensus 168 ~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~ 218 (253)
.....+|..+++.+++.++ ++++++++|||+. ||+.|++.+|..++.+.
T Consensus 162 ~~~~~~K~~al~~l~~~~~-i~~~~~i~~GD~~-ND~~ml~~~~~~~va~~ 210 (249)
T TIGR01485 162 LPQGSGKGQALQYLLQKLA-MEPSQTLVCGDSG-NDIELFEIGSVRGVIVS 210 (249)
T ss_pred EeCCCChHHHHHHHHHHcC-CCccCEEEEECCh-hHHHHHHccCCcEEEEC
Confidence 4456889999999999999 9999999999999 99999999766666654
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=99.00 E-value=8.2e-10 Score=81.27 Aligned_cols=110 Identities=18% Similarity=0.195 Sum_probs=67.1
Q ss_pred CCccCCChHHHHHHHHHcCCEEEEEeCCCcch----h---hhhhhhc-CCCCCcceeEeeeccccCccCCCHHHHHHHHH
Q 039449 112 PYTVFPDSQPFLRWAREKGLIVGIISNAEYRY----Q---DVILPAL-GVNQGTEWDFGVFSGLEGVEKPDPRIYEIALE 183 (253)
Q Consensus 112 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~----~---~~~l~~~-gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~ 183 (253)
..+|.||+.+.|++|.+.|+.++++|...... . ...++.. |.. .++.++++.. |.
T Consensus 71 ~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i---~~~~~~~~~~----K~---------- 133 (191)
T PF06941_consen 71 NLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFI---PYDNLIFTGD----KT---------- 133 (191)
T ss_dssp T--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHH---HHCCEEEESS----GG----------
T ss_pred CCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCC---chheEEEecC----CC----------
Confidence 35889999999999999998888888876651 2 2233332 321 2233444322 21
Q ss_pred HhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHHHHHHhhh
Q 039449 184 RAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKEFLTSE 249 (253)
Q Consensus 184 ~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~~~l~~~ 249 (253)
.++ .+ ++|+|++ ..+..+...|+++++++.+- +. .. ....++.||+|+.+.+.+.
T Consensus 134 ~v~-~D----vlIDD~~-~n~~~~~~~g~~~iLfd~p~-Nr--~~--~~~~Rv~~W~ei~~~i~~~ 188 (191)
T PF06941_consen 134 LVG-GD----VLIDDRP-HNLEQFANAGIPVILFDQPY-NR--DE--SNFPRVNNWEEIEDLILSS 188 (191)
T ss_dssp GC---S----EEEESSS-HHHSS-SSESSEEEEE--GG-GT--T----TSEEE-STTSHHHHHHHT
T ss_pred eEe-cc----EEecCCh-HHHHhccCCCceEEEEcCCC-CC--CC--CCCccCCCHHHHHHHHHhc
Confidence 123 33 8999999 68999999999999998422 11 11 1568999999999888553
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.96 E-value=2.1e-09 Score=81.91 Aligned_cols=49 Identities=16% Similarity=0.104 Sum_probs=43.6
Q ss_pred cCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEc
Q 039449 168 EGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVD 218 (253)
Q Consensus 168 ~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~ 218 (253)
.....+|+.+++.++++++ ++++++++|||+. ||+.|++.+|...++-+
T Consensus 154 ~~~~~~K~~al~~l~~~~g-~~~~~~i~~GD~~-nD~~ml~~~~~~iav~n 202 (236)
T TIGR02471 154 LPLRASKGLALRYLSYRWG-LPLEQILVAGDSG-NDEEMLRGLTLGVVVGN 202 (236)
T ss_pred eeCCCChHHHHHHHHHHhC-CCHHHEEEEcCCc-cHHHHHcCCCcEEEEcC
Confidence 3445789999999999999 9999999999999 99999999998887644
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.95 E-value=2.6e-09 Score=82.20 Aligned_cols=63 Identities=22% Similarity=0.296 Sum_probs=50.5
Q ss_pred CCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHH
Q 039449 172 KPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVA 241 (253)
Q Consensus 172 kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~e 241 (253)
-.|..+++.+++.++ ++++++++|||+. ||+.|.+.+|...++-+. .+.+.....+++++-.+
T Consensus 185 vsK~~ai~~l~~~~~-i~~~~~~~~GD~~-ND~~Ml~~~~~~~am~na-----~~~~k~~a~~i~~~~~~ 247 (254)
T PF08282_consen 185 VSKGSAIKYLLEYLG-ISPEDIIAFGDSE-NDIEMLELAGYSVAMGNA-----TPELKKAADYITPSNND 247 (254)
T ss_dssp SSHHHHHHHHHHHHT-TSGGGEEEEESSG-GGHHHHHHSSEEEEETTS------HHHHHHSSEEESSGTC
T ss_pred CCHHHHHHHHhhhcc-cccceeEEeeccc-ccHhHHhhcCeEEEEcCC-----CHHHHHhCCEEecCCCC
Confidence 567899999999999 9999999999999 999999999999887552 34555566666655443
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.1e-08 Score=78.94 Aligned_cols=49 Identities=12% Similarity=0.102 Sum_probs=44.2
Q ss_pred CccCCCHHHHHHHHHHhCCCC--CCceEEEcCCcccchhhhhhcCCeEEEEcC
Q 039449 169 GVEKPDPRIYEIALERAGNIA--PEEALHIGDSFRKDYVPAKSVGMHALLVDR 219 (253)
Q Consensus 169 ~~~kp~~~~~~~~~~~~~~~~--~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~ 219 (253)
.....|..+++.+++.++ ++ .+++++|||+. ||+.|.+.+|.+.++-+.
T Consensus 172 ~~~~~Kg~ai~~l~~~~~-i~~~~~~~~a~GD~~-ND~~Ml~~ag~~vam~Na 222 (256)
T TIGR01486 172 GAGSDKGKAANALKQFYN-QPGGAIKVVGLGDSP-NDLPLLEVVDLAVVVPGP 222 (256)
T ss_pred cCCCCHHHHHHHHHHHHh-hcCCCceEEEEcCCH-hhHHHHHHCCEEEEeCCC
Confidence 345678889999999999 99 99999999999 999999999999999773
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.91 E-value=7.7e-09 Score=88.26 Aligned_cols=113 Identities=12% Similarity=0.168 Sum_probs=83.9
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCce
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEA 193 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 193 (253)
+++|++.+++++|++.|++++++|+.....++.+++.+|++ +| +... +++| ..+++++. .++++|
T Consensus 405 ~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~---~~-----~~~~--p~~K----~~~v~~l~-~~~~~v 469 (562)
T TIGR01511 405 QLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN---VR-----AEVL--PDDK----AALIKELQ-EKGRVV 469 (562)
T ss_pred cccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc---EE-----ccCC--hHHH----HHHHHHHH-HcCCEE
Confidence 57899999999999999999999999999999999999995 22 2211 1233 34555555 567899
Q ss_pred EEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCccc--CCHHHHHHHHh
Q 039449 194 LHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVL--PDLVAVKEFLT 247 (253)
Q Consensus 194 ~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i--~~l~el~~~l~ 247 (253)
+||||+. ||+.+++++|+...+- .+ . +......++++ +++.++..++.
T Consensus 470 ~~VGDg~-nD~~al~~A~vgia~g--~g--~-~~a~~~Advvl~~~~l~~l~~~i~ 519 (562)
T TIGR01511 470 AMVGDGI-NDAPALAQADVGIAIG--AG--T-DVAIEAADVVLMRNDLNDVATAID 519 (562)
T ss_pred EEEeCCC-ccHHHHhhCCEEEEeC--Cc--C-HHHHhhCCEEEeCCCHHHHHHHHH
Confidence 9999999 9999999999864432 22 1 22233456666 58888887775
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.2e-09 Score=77.95 Aligned_cols=98 Identities=14% Similarity=0.063 Sum_probs=82.7
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCce
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEA 193 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 193 (253)
...||+.++|++|.+. +.++|.|++....++.+++.++... .+|..+++.+.....+++ +.+.++.+| .+++++
T Consensus 42 ~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~-~~f~~~l~r~~~~~~~~~---~~K~L~~l~-~~~~~v 115 (162)
T TIGR02251 42 FKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGG-KVISRRLYRESCVFTNGK---YVKDLSLVG-KDLSKV 115 (162)
T ss_pred EECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCC-CEEeEEEEccccEEeCCC---EEeEchhcC-CChhhE
Confidence 6679999999999988 9999999999999999999998753 367777776665555555 567788899 999999
Q ss_pred EEEcCCcccchhhhhhcCCeEEEEc
Q 039449 194 LHIGDSFRKDYVPAKSVGMHALLVD 218 (253)
Q Consensus 194 ~~iGD~~~~Di~~a~~~G~~~i~~~ 218 (253)
++|||++ .++.++.+.|+.+....
T Consensus 116 IiVDD~~-~~~~~~~~NgI~i~~f~ 139 (162)
T TIGR02251 116 IIIDNSP-YSYSLQPDNAIPIKSWF 139 (162)
T ss_pred EEEeCCh-hhhccCccCEeecCCCC
Confidence 9999999 79999999998876554
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.86 E-value=5.4e-08 Score=64.23 Aligned_cols=121 Identities=10% Similarity=0.138 Sum_probs=96.3
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCc
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEE 192 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 192 (253)
-.+++.+.+.+++|++. ..++|.|+.....+...++-.|++- +.++.. .++++-..+++.++ -+.+.
T Consensus 29 Gklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~----~rv~a~-------a~~e~K~~ii~eLk-k~~~k 95 (152)
T COG4087 29 GKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPV----ERVFAG-------ADPEMKAKIIRELK-KRYEK 95 (152)
T ss_pred cEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCce----eeeecc-------cCHHHHHHHHHHhc-CCCcE
Confidence 37889999999999999 9999999999999998999998875 332221 23467778899998 66689
Q ss_pred eEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHHHHHHhhh
Q 039449 193 ALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKEFLTSE 249 (253)
Q Consensus 193 ~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~~~l~~~ 249 (253)
|+||||.. ||+.+.+++.+..+-+...+ .++......++++.+..|+.+++...
T Consensus 96 ~vmVGnGa-ND~laLr~ADlGI~tiq~e~--v~~r~l~~ADvvik~i~e~ldl~~~~ 149 (152)
T COG4087 96 VVMVGNGA-NDILALREADLGICTIQQEG--VPERLLLTADVVLKEIAEILDLLKDT 149 (152)
T ss_pred EEEecCCc-chHHHhhhcccceEEeccCC--cchHHHhhchhhhhhHHHHHHHhhcc
Confidence 99999999 99999999988876665322 23334456789999999999988654
|
|
| >KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.85 E-value=3.5e-07 Score=66.55 Aligned_cols=126 Identities=18% Similarity=0.120 Sum_probs=93.9
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccc-cCccCCCHHHHHHHHHHhCCCCCCc
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGL-EGVEKPDPRIYEIALERAGNIAPEE 192 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~-~~~~kp~~~~~~~~~~~~~~~~~~~ 192 (253)
.+++++.+.++..+..|++++|.|.++...+..+..+.+-.+ .-..+-..-+ .-..|...+.|..+.+.+| .++.+
T Consensus 123 ~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~~gd--l~~y~~gyfDt~iG~K~e~~sy~~I~~~Ig-~s~~e 199 (254)
T KOG2630|consen 123 HVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSDAGD--LRKYISGYFDTTIGLKVESQSYKKIGHLIG-KSPRE 199 (254)
T ss_pred cccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccCcch--HHHHhhhhhhccccceehhHHHHHHHHHhC-CChhh
Confidence 678999999999999999999999999988777666554322 1111111111 1223667789999999999 99999
Q ss_pred eEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHHH
Q 039449 193 ALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVK 243 (253)
Q Consensus 193 ~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~ 243 (253)
++|.-|-+ ....+|+.+|+.+.++.++|.....+-.....-++.+++.|.
T Consensus 200 iLfLTd~~-~Ea~aa~~aGl~a~l~~rPgna~l~dd~~~~y~~i~~F~~l~ 249 (254)
T KOG2630|consen 200 ILFLTDVP-REAAAARKAGLQAGLVSRPGNAPLPDDAKVEYCVIWSFEILE 249 (254)
T ss_pred eEEeccCh-HHHHHHHhcccceeeeecCCCCCCCcccccceeeeccchhhh
Confidence 99999999 799999999999999988776654432222345777777664
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.84 E-value=5.3e-08 Score=74.56 Aligned_cols=46 Identities=22% Similarity=0.177 Sum_probs=37.3
Q ss_pred cCCCHHHHHHHHHHhCCCC--CCceEEEcCCcccchhhhhhcCCeEEEEc
Q 039449 171 EKPDPRIYEIALERAGNIA--PEEALHIGDSFRKDYVPAKSVGMHALLVD 218 (253)
Q Consensus 171 ~kp~~~~~~~~~~~~~~~~--~~~~~~iGD~~~~Di~~a~~~G~~~i~~~ 218 (253)
..+|.++++.+.+.+. -. +-.++.+|||+ ||+.|.+.+-++.|.-.
T Consensus 206 ~~dKg~A~~~L~~~y~-~~~~~~~tiaLGDsp-ND~~mLe~~D~~vvi~~ 253 (302)
T PRK12702 206 SLPGEQAVQLLLDCYQ-RHLGPIKALGIGCSP-PDLAFLRWSEQKVVLPS 253 (302)
T ss_pred CCCHHHHHHHHHHHHH-hccCCceEEEecCCh-hhHHHHHhCCeeEEecC
Confidence 3467788888888887 33 34799999999 99999999999877644
|
|
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.6e-08 Score=90.33 Aligned_cols=115 Identities=13% Similarity=0.146 Sum_probs=88.2
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCce
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEA 193 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 193 (253)
.++|++.+.++.|++.|++++++|+.....++.+.+.+|++. +|.. .. |+.-..+++.++ .+++++
T Consensus 650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~--~~~~-----~~------p~~K~~~i~~l~-~~~~~v 715 (834)
T PRK10671 650 PLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE--VIAG-----VL------PDGKAEAIKRLQ-SQGRQV 715 (834)
T ss_pred cchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE--EEeC-----CC------HHHHHHHHHHHh-hcCCEE
Confidence 568999999999999999999999999999999999999986 4432 11 233345777787 778899
Q ss_pred EEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcC-CcccCCHHHHHHHHh
Q 039449 194 LHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSG-AIVLPDLVAVKEFLT 247 (253)
Q Consensus 194 ~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~-~~~i~~l~el~~~l~ 247 (253)
+||||+. ||+.+++++|+..++-+ + ......... .+...++++|..+++
T Consensus 716 ~~vGDg~-nD~~al~~Agvgia~g~--g--~~~a~~~ad~vl~~~~~~~i~~~i~ 765 (834)
T PRK10671 716 AMVGDGI-NDAPALAQADVGIAMGG--G--SDVAIETAAITLMRHSLMGVADALA 765 (834)
T ss_pred EEEeCCH-HHHHHHHhCCeeEEecC--C--CHHHHHhCCEEEecCCHHHHHHHHH
Confidence 9999999 99999999999665532 2 222222222 256678999988886
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.7e-08 Score=77.27 Aligned_cols=91 Identities=19% Similarity=0.131 Sum_probs=73.7
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhh--hhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCC
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQD--VILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPE 191 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~--~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 191 (253)
.++||+.++|++|+++|++++++||+...... ..++.+|+.. .+|+.+++++.... ..+..++++++ .+++
T Consensus 24 ~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~-~~~~~Ii~s~~~~~-----~~l~~~~~~~~-~~~~ 96 (242)
T TIGR01459 24 HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINA-DLPEMIISSGEIAV-----QMILESKKRFD-IRNG 96 (242)
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCc-cccceEEccHHHHH-----HHHHhhhhhcc-CCCc
Confidence 67899999999999999999999998887655 7889999862 15777777765543 46667778888 8899
Q ss_pred ceEEEcCCcccchhhhhhcCC
Q 039449 192 EALHIGDSFRKDYVPAKSVGM 212 (253)
Q Consensus 192 ~~~~iGD~~~~Di~~a~~~G~ 212 (253)
++++|||+. .|+.....+|.
T Consensus 97 ~~~~vGd~~-~d~~~~~~~~~ 116 (242)
T TIGR01459 97 IIYLLGHLE-NDIINLMQCYT 116 (242)
T ss_pred eEEEeCCcc-cchhhhcCCCc
Confidence 999999999 79887765554
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.83 E-value=2.5e-08 Score=89.49 Aligned_cols=127 Identities=11% Similarity=0.089 Sum_probs=95.6
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCc----------------cCCCHHH
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGV----------------EKPDPRI 177 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~----------------~kp~~~~ 177 (253)
+++|++.+.++.|++.|++++++|+.....+..+.+..|+.. .+..++...+... ..+.|+-
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~--~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~ 605 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPS--KTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEH 605 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--CCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHH
Confidence 568999999999999999999999999999999999999986 4444433333221 1355666
Q ss_pred HHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCccc--CCHHHHHHHHhh
Q 039449 178 YEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVL--PDLVAVKEFLTS 248 (253)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i--~~l~el~~~l~~ 248 (253)
-..+.+.+. -..+.+.|+||+. ||..++++|++...+-. ...+.-...+++++ +++..+...++.
T Consensus 606 K~~iv~~lq-~~g~~v~mvGDGv-ND~pAl~~AdVGia~g~----~g~~va~~aaDivl~dd~~~~i~~~i~~ 672 (884)
T TIGR01522 606 KMKIVKALQ-KRGDVVAMTGDGV-NDAPALKLADIGVAMGQ----TGTDVAKEAADMILTDDDFATILSAIEE 672 (884)
T ss_pred HHHHHHHHH-HCCCEEEEECCCc-ccHHHHHhCCeeEecCC----CcCHHHHHhcCEEEcCCCHHHHHHHHHH
Confidence 677777777 6668899999999 99999999997655421 11222234567777 679999888764
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=98.80 E-value=3e-08 Score=64.72 Aligned_cols=84 Identities=20% Similarity=0.174 Sum_probs=54.4
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcch---hhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCC
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRY---QDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAP 190 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~---~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~ 190 (253)
.+.||+.+++++|+++|++++++||++... ....++.+|+.- -.+.++++.. +....+++.. ..
T Consensus 14 ~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~--~~~~i~ts~~---------~~~~~l~~~~--~~ 80 (101)
T PF13344_consen 14 EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPV--DEDEIITSGM---------AAAEYLKEHK--GG 80 (101)
T ss_dssp EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT----GGGEEEHHH---------HHHHHHHHHT--TS
T ss_pred CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCC--CcCEEEChHH---------HHHHHHHhcC--CC
Confidence 567999999999999999999999998654 345567788875 3344444433 3334444422 35
Q ss_pred CceEEEcCCcccchhhhhhcCC
Q 039449 191 EEALHIGDSFRKDYVPAKSVGM 212 (253)
Q Consensus 191 ~~~~~iGD~~~~Di~~a~~~G~ 212 (253)
..++++|-.. ....++.+|+
T Consensus 81 ~~v~vlG~~~--l~~~l~~~G~ 100 (101)
T PF13344_consen 81 KKVYVLGSDG--LREELREAGF 100 (101)
T ss_dssp SEEEEES-HH--HHHHHHHTTE
T ss_pred CEEEEEcCHH--HHHHHHHcCC
Confidence 6888888764 5677777775
|
... |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=8.6e-08 Score=81.47 Aligned_cols=46 Identities=20% Similarity=0.151 Sum_probs=41.6
Q ss_pred cCCCHHHHHHHHHHhCCCCCCceEEE--cCCcccchhhhhhcCCeEEEEc
Q 039449 171 EKPDPRIYEIALERAGNIAPEEALHI--GDSFRKDYVPAKSVGMHALLVD 218 (253)
Q Consensus 171 ~kp~~~~~~~~~~~~~~~~~~~~~~i--GD~~~~Di~~a~~~G~~~i~~~ 218 (253)
.-.|..+++.+++.++ ++.++++.| ||+. ||+.|.+.+|.+.++-.
T Consensus 611 gvdKG~AL~~L~e~~g-I~~~eViafalGDs~-NDisMLe~Ag~gVAM~~ 658 (694)
T PRK14502 611 GNDKGKAIKILNELFR-LNFGNIHTFGLGDSE-NDYSMLETVDSPILVQR 658 (694)
T ss_pred CCCHHHHHHHHHHHhC-CCccceEEEEcCCcH-hhHHHHHhCCceEEEcC
Confidence 4567799999999999 999999999 9999 99999999999988855
|
|
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.6e-08 Score=76.12 Aligned_cols=85 Identities=19% Similarity=0.209 Sum_probs=64.4
Q ss_pred CChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCcc-------------------------
Q 039449 117 PDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVE------------------------- 171 (253)
Q Consensus 117 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~------------------------- 171 (253)
|++.++|.+|+++|++++|+||+....+...++.+|+.. +|+.++.++.....
T Consensus 151 p~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~--yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~ 228 (303)
T PHA03398 151 PFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEG--YFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDVT 228 (303)
T ss_pred hhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCc--cccEEEECCCcccccccceeecccceeEEecCceeEeCC
Confidence 788999999999999999999999999999999999998 88877776653211
Q ss_pred ----CC-CHHHHHHHHHHhCCCCC-CceEEEcCCcccch
Q 039449 172 ----KP-DPRIYEIALERAGNIAP-EEALHIGDSFRKDY 204 (253)
Q Consensus 172 ----kp-~~~~~~~~~~~~~~~~~-~~~~~iGD~~~~Di 204 (253)
-| +|......+++.| +.- +.+..|+|-..||+
T Consensus 229 ~~~~lPKSprvVl~yL~~~g-vn~~KtiTLVDDl~~Nn~ 266 (303)
T PHA03398 229 DVKNLPKSPRVVLWYLRKKG-VNYFKTITLVDDLKSNNY 266 (303)
T ss_pred cccCCCCCCeehHHHHHHcC-cceeccEEEeccCcccCc
Confidence 11 3555556666666 543 45666777766655
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.3e-07 Score=66.95 Aligned_cols=94 Identities=13% Similarity=0.085 Sum_probs=61.4
Q ss_pred cCCChHHHHHHHHHcCCEEEEEeCCCcchhh---hhhhh-----cCCCCCcceeEeeecccc---------CccCC---C
Q 039449 115 VFPDSQPFLRWAREKGLIVGIISNAEYRYQD---VILPA-----LGVNQGTEWDFGVFSGLE---------GVEKP---D 174 (253)
Q Consensus 115 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~---~~l~~-----~gl~~~~~f~~~~~~~~~---------~~~kp---~ 174 (253)
+.|++.+++++++++|++++++|+.+..... ..++. .++.. ..++.+... -..+| |
T Consensus 28 ~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~----g~li~~~g~~~~~~~~e~i~~~~~~~K 103 (157)
T smart00775 28 THPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH----GPVLLSPDRLFAALHREVISKKPEVFK 103 (157)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC----ceEEEcCCcchhhhhcccccCCHHHHH
Confidence 3478999999999999999999999887663 55555 23432 122222221 12233 4
Q ss_pred HHHHHHHHHHhCCCCCCc-eEEEcCCcccchhhhhhcCCeE
Q 039449 175 PRIYEIALERAGNIAPEE-ALHIGDSFRKDYVPAKSVGMHA 214 (253)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~-~~~iGD~~~~Di~~a~~~G~~~ 214 (253)
.+.++.+.+.+. -.... ++.+||+. +|+.+=+++|++.
T Consensus 104 ~~~l~~i~~~~~-~~~~~f~~~~gn~~-~D~~~y~~~gi~~ 142 (157)
T smart00775 104 IACLRDIKSLFP-PQGNPFYAGFGNRI-TDVISYSAVGIPP 142 (157)
T ss_pred HHHHHHHHHhcC-CCCCCEEEEeCCCc-hhHHHHHHcCCCh
Confidence 556666665553 22233 34588889 9999999999976
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.2e-07 Score=71.48 Aligned_cols=43 Identities=19% Similarity=0.214 Sum_probs=36.3
Q ss_pred cCCCHHHHHHHHHHhCCC--CCCceEEEcCCcccchhhhhhcCCeEE
Q 039449 171 EKPDPRIYEIALERAGNI--APEEALHIGDSFRKDYVPAKSVGMHAL 215 (253)
Q Consensus 171 ~kp~~~~~~~~~~~~~~~--~~~~~~~iGD~~~~Di~~a~~~G~~~i 215 (253)
.-.|+.+++.+++.++ + +++++++|||+. ||+.|.+.+|++.+
T Consensus 179 ~~sK~~al~~l~~~~~-~~~~~~~~i~~GD~~-nD~~ml~~ag~~v~ 223 (225)
T TIGR02461 179 GSDKGKAIKRLLDLYK-LRPGAIESVGLGDSE-NDFPMFEVVDLAFL 223 (225)
T ss_pred CCCHHHHHHHHHHHhc-cccCcccEEEEcCCH-HHHHHHHhCCCcEe
Confidence 3445688888888887 5 677999999999 99999999999765
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=98.71 E-value=2.2e-07 Score=69.20 Aligned_cols=97 Identities=16% Similarity=0.180 Sum_probs=63.1
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcch---hhhhhhhcCCCCCcceeEeeeccccCccCC----CHHHHHHHHHHh
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRY---QDVILPALGVNQGTEWDFGVFSGLEGVEKP----DPRIYEIALERA 185 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~---~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp----~~~~~~~~~~~~ 185 (253)
.++.|++.++++.++++|++++++|+.+... +...|...|+.. + +.++.-......++ |.+...++. .-
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~--~-~~LiLR~~~d~~~~~~~yKs~~R~~l~-~~ 194 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTG--W-KHLILRGLEDSNKTVVTYKSEVRKSLM-EE 194 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCC--c-CeeeecCCCCCCchHhHHHHHHHHHHH-hC
Confidence 3778999999999999999999999998766 556677788875 2 44444332222232 222222222 22
Q ss_pred CCCCCCceEEEcCCcccchhhhhhcCCeEEEEc
Q 039449 186 GNIAPEEALHIGDSFRKDYVPAKSVGMHALLVD 218 (253)
Q Consensus 186 ~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~ 218 (253)
| -.=+..|||.. +|+.+ -.+|..+.-++
T Consensus 195 G---YrIv~~iGDq~-sDl~G-~~~~~RtFKLP 222 (229)
T TIGR01675 195 G---YRIWGNIGDQW-SDLLG-SPPGRRTFKLP 222 (229)
T ss_pred C---ceEEEEECCCh-HHhcC-CCccCceeeCC
Confidence 2 23578899999 99965 34555554444
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.5e-08 Score=76.33 Aligned_cols=97 Identities=18% Similarity=0.260 Sum_probs=61.2
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcch---hhhhhhhcCCCCCcceeEeeeccccC-cc----CCCHHHHHHHHHHh
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRY---QDVILPALGVNQGTEWDFGVFSGLEG-VE----KPDPRIYEIALERA 185 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~---~~~~l~~~gl~~~~~f~~~~~~~~~~-~~----kp~~~~~~~~~~~~ 185 (253)
.+.|++.++++.++++|+.|+++||..... ...-|+..|... .+.++...... .. .-|....+.+.+.
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~---~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~- 190 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPG---WDHLILRPDKDPSKKSAVEYKSERRKEIEKK- 190 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTST---BSCGEEEEESSTSS------SHHHHHHHHHT-
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCc---cchhccccccccccccccccchHHHHHHHHc-
Confidence 677999999999999999999999998764 334566677654 23333222221 11 1233444444444
Q ss_pred CCCCCCceEEEcCCcccchhhhhhc---CCeEEEEc
Q 039449 186 GNIAPEEALHIGDSFRKDYVPAKSV---GMHALLVD 218 (253)
Q Consensus 186 ~~~~~~~~~~iGD~~~~Di~~a~~~---G~~~i~~~ 218 (253)
| . +=+++|||+. +|+..++.. |...+.++
T Consensus 191 G-y--~Ii~~iGD~~-~D~~~~~~~~~~~~r~f~lP 222 (229)
T PF03767_consen 191 G-Y--RIIANIGDQL-SDFSGAKTAGARAERWFKLP 222 (229)
T ss_dssp T-E--EEEEEEESSG-GGCHCTHHHHHHHTTEEE-T
T ss_pred C-C--cEEEEeCCCH-HHhhcccccccccceEEEcC
Confidence 3 1 2489999999 899995444 34444444
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >COG4996 Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.9e-07 Score=61.68 Aligned_cols=82 Identities=26% Similarity=0.315 Sum_probs=63.9
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhC-----C
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAG-----N 187 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~-----~ 187 (253)
+.++|.++++++.++..|+-+..+|=+....+-..++.+++.. ||+.+++-.--- |-.++-+++..++ -
T Consensus 40 v~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~~--yFhy~ViePhP~----K~~ML~~llr~i~~er~~~ 113 (164)
T COG4996 40 VHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLLQ--YFHYIVIEPHPY----KFLMLSQLLREINTERNQK 113 (164)
T ss_pred EEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchhh--hEEEEEecCCCh----hHHHHHHHHHHHHHhhccc
Confidence 4889999999999999999999999888777778999999998 888765432211 2245555555543 2
Q ss_pred CCCCceEEEcCCc
Q 039449 188 IAPEEALHIGDSF 200 (253)
Q Consensus 188 ~~~~~~~~iGD~~ 200 (253)
++|.++++++|+.
T Consensus 114 ikP~~Ivy~DDR~ 126 (164)
T COG4996 114 IKPSEIVYLDDRR 126 (164)
T ss_pred cCcceEEEEeccc
Confidence 7899999999988
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.2e-06 Score=66.41 Aligned_cols=98 Identities=10% Similarity=0.079 Sum_probs=60.1
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcch---hhhhhhhcCCCCCcceeEeeeccccCccCCCH-----HHHHHHHHH
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRY---QDVILPALGVNQGTEWDFGVFSGLEGVEKPDP-----RIYEIALER 184 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~---~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~-----~~~~~~~~~ 184 (253)
.++.|++.++.++++++|++++++||..... ...-|+..|... + +.++.-......+.+. +...++. +
T Consensus 144 ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~--~-~~LiLR~~~D~~~~~av~yKs~~R~~li-~ 219 (275)
T TIGR01680 144 APALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHT--W-EKLILKDPQDNSAENAVEYKTAARAKLI-Q 219 (275)
T ss_pred CCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCC--c-ceeeecCCCCCccchhHHHHHHHHHHHH-H
Confidence 3678999999999999999999999998654 334455667764 2 4444432222222111 2222222 1
Q ss_pred hCCCCCCceEEEcCCcccchhhhhhcCCeEEEEc
Q 039449 185 AGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVD 218 (253)
Q Consensus 185 ~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~ 218 (253)
-| -.=+..|||.. +|+.+....+-.+.-++
T Consensus 220 eG---YrIv~~iGDq~-sDl~G~~~g~~RtFKLP 249 (275)
T TIGR01680 220 EG---YNIVGIIGDQW-NDLKGEHRGAIRSFKLP 249 (275)
T ss_pred cC---ceEEEEECCCH-HhccCCCccCcceecCC
Confidence 22 33578999999 99976552234555544
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=9.3e-07 Score=78.00 Aligned_cols=112 Identities=14% Similarity=0.160 Sum_probs=83.0
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCce
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEA 193 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 193 (253)
+++|++.+.+++|++.|++++++|+.....++.+.+.+|+.. ++ +.. | +--..+++.++ - ++.|
T Consensus 568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~--~~------~~~----p--~~K~~~v~~l~-~-~~~v 631 (741)
T PRK11033 568 TLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDF--RA------GLL----P--EDKVKAVTELN-Q-HAPL 631 (741)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCe--ec------CCC----H--HHHHHHHHHHh-c-CCCE
Confidence 578999999999999999999999999999999999999963 21 111 1 22223566665 3 3689
Q ss_pred EEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCC--cccCCHHHHHHHHh
Q 039449 194 LHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGA--IVLPDLVAVKEFLT 247 (253)
Q Consensus 194 ~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~--~~i~~l~el~~~l~ 247 (253)
+||||+. ||..+++.+++..++-. + .... .+..+ ...+++.+|..++.
T Consensus 632 ~mvGDgi-NDapAl~~A~vgia~g~--~--~~~a-~~~adivl~~~~l~~l~~~i~ 681 (741)
T PRK11033 632 AMVGDGI-NDAPAMKAASIGIAMGS--G--TDVA-LETADAALTHNRLRGLAQMIE 681 (741)
T ss_pred EEEECCH-HhHHHHHhCCeeEEecC--C--CHHH-HHhCCEEEecCCHHHHHHHHH
Confidence 9999999 99999999997776643 2 2222 22344 45568888887775
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.5e-06 Score=78.50 Aligned_cols=128 Identities=14% Similarity=0.115 Sum_probs=89.8
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcc--eeEeeeccccC----------------ccCCCH
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTE--WDFGVFSGLEG----------------VEKPDP 175 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~--f~~~~~~~~~~----------------~~kp~~ 175 (253)
+++|++.+.++.|++.|++++++|+.....+..+.+..|+..... ....+...+.. .....|
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P 616 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEP 616 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCH
Confidence 468999999999999999999999999999999999999864100 00111111100 012233
Q ss_pred HHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCC--HHHHHHHHhh
Q 039449 176 RIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPD--LVAVKEFLTS 248 (253)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~--l~el~~~l~~ 248 (253)
+--..+.+.++ -..+.+.|+||+. ||+.+.++|+++.++-. + .+.....+++++.+ +..+.+++.+
T Consensus 617 ~~K~~iV~~lq-~~g~~va~iGDG~-ND~~alk~AdVGia~g~--g---~~~ak~aAD~vl~dd~f~~i~~~i~~ 684 (917)
T TIGR01116 617 SHKSELVELLQ-EQGEIVAMTGDGV-NDAPALKKADIGIAMGS--G---TEVAKEASDMVLADDNFATIVAAVEE 684 (917)
T ss_pred HHHHHHHHHHH-hcCCeEEEecCCc-chHHHHHhCCeeEECCC--C---cHHHHHhcCeEEccCCHHHHHHHHHH
Confidence 44456666776 5668899999999 99999999999765532 2 22334567788876 9999888754
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.1e-06 Score=72.09 Aligned_cols=47 Identities=19% Similarity=0.157 Sum_probs=40.8
Q ss_pred ccCCCHHHHHHHHHHh---CCCCCCceEEEcCCcccchhhhhhcC-CeEEEEc
Q 039449 170 VEKPDPRIYEIALERA---GNIAPEEALHIGDSFRKDYVPAKSVG-MHALLVD 218 (253)
Q Consensus 170 ~~kp~~~~~~~~~~~~---~~~~~~~~~~iGD~~~~Di~~a~~~G-~~~i~~~ 218 (253)
..-.|..+++.+++++ + +++++++++||+. ||++|.+.+| ...++-+
T Consensus 172 ~g~sKg~Al~~L~~~~~~~g-i~~~~~iafGDs~-NDleMl~~ag~~gvam~N 222 (413)
T PLN02382 172 QGAGKGQALAYLLKKLKAEG-KAPVNTLVCGDSG-NDAELFSVPDVYGVMVSN 222 (413)
T ss_pred CCCCHHHHHHHHHHHhhhcC-CChhcEEEEeCCH-HHHHHHhcCCCCEEEEcC
Confidence 4456789999999999 8 9999999999999 9999999999 5666644
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=98.39 E-value=1.1e-05 Score=67.52 Aligned_cols=112 Identities=15% Similarity=0.083 Sum_probs=64.5
Q ss_pred ChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhh-cCCCCCcce--------eEe
Q 039449 92 DEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPA-LGVNQGTEW--------DFG 162 (253)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~gl~~~~~f--------~~~ 162 (253)
+.+++....++++.++... .+.+.+.+ .++++|.. +++|......++.+++. +|++. .. +..
T Consensus 91 ~~~el~~~~r~~l~~f~~~---~l~~~a~~---~~~~~g~~-vvVSASp~~~Vepfa~~~LGid~--VIgTeLev~~~G~ 161 (497)
T PLN02177 91 KIRDIELVSRSVLPKFYAE---DVHPETWR---VFNSFGKR-YIITASPRIMVEPFVKTFLGADK--VLGTELEVSKSGR 161 (497)
T ss_pred CHHHHHHHHHHHHHHHHHH---hcCHHHHH---HHHhCCCE-EEEECCcHHHHHHHHHHcCCCCE--EEecccEECcCCE
Confidence 5566655555555444322 24444444 44567755 89999999999999965 78875 11 111
Q ss_pred eeccccCccCC-C-HHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEE
Q 039449 163 VFSGLEGVEKP-D-PRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALL 216 (253)
Q Consensus 163 ~~~~~~~~~kp-~-~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~ 216 (253)
++....+. .+ . .+-...+-+.++ .+... +++|||. +|..+...|+-..+.
T Consensus 162 ~TG~i~g~-~~c~Ge~Kv~rl~~~~g-~~~~~-~aYgDS~-sD~plL~~a~e~y~V 213 (497)
T PLN02177 162 ATGFMKKP-GVLVGDHKRDAVLKEFG-DALPD-LGLGDRE-TDHDFMSICKEGYMV 213 (497)
T ss_pred EeeeecCC-CCCccHHHHHHHHHHhC-CCCce-EEEECCc-cHHHHHHhCCccEEe
Confidence 11111110 01 1 122223334556 54444 8999999 899999999966443
|
|
| >COG2503 Predicted secreted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.35 E-value=4.6e-06 Score=61.45 Aligned_cols=82 Identities=17% Similarity=0.188 Sum_probs=57.8
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcch----hhhhhhhcCCCCCccee-EeeeccccCccCCCHHHHHHHHHHhCCC
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRY----QDVILPALGVNQGTEWD-FGVFSGLEGVEKPDPRIYEIALERAGNI 188 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~----~~~~l~~~gl~~~~~f~-~~~~~~~~~~~kp~~~~~~~~~~~~~~~ 188 (253)
.+.||+.+++++.-++|..+..+||...+. ...-|+..|++. .-. .++.- ...+++..-++.+-+.+.
T Consensus 122 k~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~--~~~~~~llk---k~~k~Ke~R~~~v~k~~~-- 194 (274)
T COG2503 122 KAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQ--VLESHLLLK---KDKKSKEVRRQAVEKDYK-- 194 (274)
T ss_pred ccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCccc--ccccceEEe---eCCCcHHHHHHHHhhccc--
Confidence 778999999999999999999999998765 334566777775 222 12222 233555555555555444
Q ss_pred CCCceEEEcCCcccchhh
Q 039449 189 APEEALHIGDSFRKDYVP 206 (253)
Q Consensus 189 ~~~~~~~iGD~~~~Di~~ 206 (253)
-++.|||++ .|...
T Consensus 195 ---iVm~vGDNl-~DF~d 208 (274)
T COG2503 195 ---IVMLVGDNL-DDFGD 208 (274)
T ss_pred ---eeeEecCch-hhhcc
Confidence 689999999 78754
|
|
| >COG5663 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.35 E-value=3.6e-06 Score=58.22 Aligned_cols=120 Identities=17% Similarity=0.145 Sum_probs=77.7
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCce
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEA 193 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 193 (253)
....++...|..+++. .+++.+|.......+..-..+.... ..++.+.+.+..+ | ..+.+.+. ++
T Consensus 72 l~~q~v~~~L~~~~e~-~~L~~itar~~dl~~iT~~~l~~q~-ih~~~l~i~g~h~--K------V~~vrth~-id---- 136 (194)
T COG5663 72 LLAQLVKQVLPSLKEE-HRLIYITARKADLTRITYAWLFIQN-IHYDHLEIVGLHH--K------VEAVRTHN-ID---- 136 (194)
T ss_pred HHHHHHHHHhHHHHhh-ceeeeeehhhHHHHHHHHHHHHHhc-cchhhhhhhcccc--c------chhhHhhc-cC----
Confidence 3345777788888877 6888999887766554444433332 1233333333222 1 14677777 76
Q ss_pred EEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHHHHHHhhhhh
Q 039449 194 LHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKEFLTSEIS 251 (253)
Q Consensus 194 ~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~~~l~~~~~ 251 (253)
+++.|+.+|-.+.|+++|++.+.++.+-.. .+ ......++-++.|....+.+.+.
T Consensus 137 lf~ed~~~na~~iAk~~~~~vilins~ynR-kp--~~~niiR~~~w~e~y~~vd~~~k 191 (194)
T COG5663 137 LFFEDSHDNAGQIAKNAGIPVILINSPYNR-KP--AAKNIIRANNWAEAYEWVDSRLK 191 (194)
T ss_pred ccccccCchHHHHHHhcCCcEEEecCcccc-cc--hHHHHHHHHhHHHHHHHHHHHhc
Confidence 899999999999999999999999942211 11 11223677788888888877653
|
|
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=98.29 E-value=3.9e-05 Score=58.73 Aligned_cols=103 Identities=17% Similarity=0.266 Sum_probs=70.6
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhh---hhcCCCCCcc-------eeEeeecc-----------c-cCcc
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVIL---PALGVNQGTE-------WDFGVFSG-----------L-EGVE 171 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l---~~~gl~~~~~-------f~~~~~~~-----------~-~~~~ 171 (253)
.+-+.+.++++.|+.+|+++..+|..........+ +.+|++-... +....+.. . ...+
T Consensus 81 lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~~ 160 (252)
T PF11019_consen 81 LIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTGG 160 (252)
T ss_pred EcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEeCC
Confidence 34578999999999999999999999877654444 3445542000 00000000 0 0122
Q ss_pred CCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhh----hhhcCCeEEEEc
Q 039449 172 KPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVP----AKSVGMHALLVD 218 (253)
Q Consensus 172 kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~----a~~~G~~~i~~~ 218 (253)
-++.+++..++...+ ..|+.++||+|+. ..+.. ++..|+..+++.
T Consensus 161 ~~KG~~L~~fL~~~~-~~pk~IIfIDD~~-~nl~sv~~a~k~~~I~f~G~~ 209 (252)
T PF11019_consen 161 QDKGEVLKYFLDKIN-QSPKKIIFIDDNK-ENLKSVEKACKKSGIDFIGFH 209 (252)
T ss_pred CccHHHHHHHHHHcC-CCCCeEEEEeCCH-HHHHHHHHHHhhCCCcEEEEE
Confidence 567899999999999 9999999999999 57654 444588888776
|
The function is not known. |
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=98.29 E-value=6.4e-06 Score=71.23 Aligned_cols=114 Identities=12% Similarity=0.087 Sum_probs=84.3
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCce
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEA 193 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 193 (253)
++.|++.+.+++|++.|++++++|+.....+..+.+.+|++. + ++.. .|+--..+++.+. -..+.+
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~--v-----~a~~------~PedK~~~v~~lq-~~g~~V 511 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD--F-----IAEA------TPEDKIALIRQEQ-AEGKLV 511 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE--E-----EcCC------CHHHHHHHHHHHH-HcCCeE
Confidence 567899999999999999999999999999999999999986 2 2221 2333334455554 344679
Q ss_pred EEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcc--cCCHHHHHHHHh
Q 039449 194 LHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIV--LPDLVAVKEFLT 247 (253)
Q Consensus 194 ~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~--i~~l~el~~~l~ 247 (253)
.|+||+. ||..+.+++++..++-+ + .+...+..+++ =+|++.+.+.++
T Consensus 512 amvGDG~-NDapAL~~AdvGiAm~~--g---t~~akeaadivLldd~~s~Iv~av~ 561 (675)
T TIGR01497 512 AMTGDGT-NDAPALAQADVGVAMNS--G---TQAAKEAANMVDLDSDPTKLIEVVH 561 (675)
T ss_pred EEECCCc-chHHHHHhCCEeEEeCC--C---CHHHHHhCCEEECCCCHHHHHHHHH
Confidence 9999999 99999999999887743 2 12223344533 357888877765
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.26 E-value=1.8e-05 Score=55.53 Aligned_cols=92 Identities=16% Similarity=0.227 Sum_probs=59.3
Q ss_pred ChHHHHHHHHHcCCEEEEEeCCCcchhhh----hhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCce
Q 039449 118 DSQPFLRWAREKGLIVGIISNAEYRYQDV----ILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEA 193 (253)
Q Consensus 118 ~~~~~l~~l~~~g~~~~i~s~~~~~~~~~----~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 193 (253)
-+..++.-..++|-.++.+|+.....++. +.+.+++.. . ..+.+.++.. ||...---..+...+ --
T Consensus 118 vA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~--m-~pv~f~Gdk~--k~~qy~Kt~~i~~~~-----~~ 187 (237)
T COG3700 118 VARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITN--M-NPVIFAGDKP--KPGQYTKTQWIQDKN-----IR 187 (237)
T ss_pred HHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCC--C-cceeeccCCC--CcccccccHHHHhcC-----ce
Confidence 45567777778899999999998765443 334456654 2 2223333222 222222223455555 35
Q ss_pred EEEcCCcccchhhhhhcCCeEEEEcCC
Q 039449 194 LHIGDSFRKDYVPAKSVGMHALLVDRF 220 (253)
Q Consensus 194 ~~iGD~~~~Di~~a~~~G~~~i~~~~~ 220 (253)
++.|||. +||.+|+.+|+..|-+.+.
T Consensus 188 IhYGDSD-~Di~AAkeaG~RgIRilRA 213 (237)
T COG3700 188 IHYGDSD-NDITAAKEAGARGIRILRA 213 (237)
T ss_pred EEecCCc-hhhhHHHhcCccceeEEec
Confidence 9999999 8999999999999987753
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=98.24 E-value=3.7e-06 Score=72.74 Aligned_cols=115 Identities=11% Similarity=0.064 Sum_probs=87.0
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCce
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEA 193 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 193 (253)
++.|++.+.+++|++.|++++++|+.....+..+.+.+|++. +++.. .|+--.++.+.+. -..+.+
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~-------v~A~~------~PedK~~iV~~lQ-~~G~~V 506 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR-------FVAEC------KPEDKINVIREEQ-AKGHIV 506 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce-------EEcCC------CHHHHHHHHHHHH-hCCCEE
Confidence 567999999999999999999999999999999999999986 23222 3344445666666 455679
Q ss_pred EEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCccc--CCHHHHHHHHhh
Q 039449 194 LHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVL--PDLVAVKEFLTS 248 (253)
Q Consensus 194 ~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i--~~l~el~~~l~~ 248 (253)
.|+||+. ||..+.+++.+..++-. +. +.-.+..+.+. +|++.+.+.++.
T Consensus 507 aMtGDGv-NDAPALa~ADVGIAMgs--GT---dvAkeAADiVLldd~ls~Iv~av~~ 557 (673)
T PRK14010 507 AMTGDGT-NDAPALAEANVGLAMNS--GT---MSAKEAANLIDLDSNPTKLMEVVLI 557 (673)
T ss_pred EEECCCh-hhHHHHHhCCEEEEeCC--CC---HHHHHhCCEEEcCCCHHHHHHHHHH
Confidence 9999999 99999999999877753 21 22234455333 578888777753
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.22 E-value=3.9e-06 Score=72.85 Aligned_cols=114 Identities=17% Similarity=0.204 Sum_probs=86.1
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCce
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEA 193 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 193 (253)
++.|++.+.+++|++.|++++++|+.+...++.+.+.+|++. +.++-.. +--.+..+++. -..+.+
T Consensus 537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~-------v~AellP------edK~~~V~~l~-~~g~~V 602 (713)
T COG2217 537 ELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE-------VRAELLP------EDKAEIVRELQ-AEGRKV 602 (713)
T ss_pred CCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh-------heccCCc------HHHHHHHHHHH-hcCCEE
Confidence 577999999999999999999999999999999999999987 4444332 22335566665 455789
Q ss_pred EEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCC--cccCCHHHHHHHHh
Q 039449 194 LHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGA--IVLPDLVAVKEFLT 247 (253)
Q Consensus 194 ~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~--~~i~~l~el~~~l~ 247 (253)
.||||.. ||-.+..++.+..++-.+ . .-. .+..+ ..=+|+..+...++
T Consensus 603 amVGDGI-NDAPALA~AdVGiAmG~G--t--DvA-~eaADvvL~~~dL~~v~~ai~ 652 (713)
T COG2217 603 AMVGDGI-NDAPALAAADVGIAMGSG--T--DVA-IEAADVVLMRDDLSAVPEAID 652 (713)
T ss_pred EEEeCCc-hhHHHHhhcCeeEeecCC--c--HHH-HHhCCEEEecCCHHHHHHHHH
Confidence 9999999 999999999988777542 1 111 23344 34457888777765
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=98.21 E-value=3.9e-07 Score=69.75 Aligned_cols=45 Identities=31% Similarity=0.373 Sum_probs=36.5
Q ss_pred cCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEc
Q 039449 171 EKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVD 218 (253)
Q Consensus 171 ~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~ 218 (253)
...|..+++.++++++ +++++++++|||. ||+.|. ..+...|.|.
T Consensus 163 ~a~K~~Al~~L~~~~~-~~~~~vl~aGDSg-ND~~mL-~~~~~~vvV~ 207 (247)
T PF05116_consen 163 GASKGAALRYLMERWG-IPPEQVLVAGDSG-NDLEML-EGGDHGVVVG 207 (247)
T ss_dssp T-SHHHHHHHHHHHHT---GGGEEEEESSG-GGHHHH-CCSSEEEE-T
T ss_pred CCCHHHHHHHHHHHhC-CCHHHEEEEeCCC-CcHHHH-cCcCCEEEEc
Confidence 3456799999999999 9999999999999 999999 7777888776
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=98.15 E-value=1.8e-05 Score=68.66 Aligned_cols=115 Identities=14% Similarity=0.119 Sum_probs=86.6
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCce
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEA 193 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 193 (253)
++.|++.+.+++|++.|++++++|+.....+..+.+..|+++ + ++.. .|+--..+.+.+. -..+-+
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~--v-----~A~~------~PedK~~iV~~lQ-~~G~~V 510 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD--F-----LAEA------TPEDKLALIRQEQ-AEGRLV 510 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE--E-----EccC------CHHHHHHHHHHHH-HcCCeE
Confidence 467999999999999999999999999999999999999986 2 2222 2344445666665 455679
Q ss_pred EEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCccc--CCHHHHHHHHhh
Q 039449 194 LHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVL--PDLVAVKEFLTS 248 (253)
Q Consensus 194 ~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i--~~l~el~~~l~~ 248 (253)
.|+||+. ||..+.+++.+..++-. +. +.-.+..+.+. +|++.+.+.++.
T Consensus 511 aMtGDGv-NDAPALa~ADVGIAMgs--GT---dvAkeAADiVLldd~~s~Iv~av~~ 561 (679)
T PRK01122 511 AMTGDGT-NDAPALAQADVGVAMNS--GT---QAAKEAGNMVDLDSNPTKLIEVVEI 561 (679)
T ss_pred EEECCCc-chHHHHHhCCEeEEeCC--CC---HHHHHhCCEEEeCCCHHHHHHHHHH
Confidence 9999999 99999999999887753 21 22234455333 478888777753
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.12 E-value=2e-05 Score=71.01 Aligned_cols=124 Identities=10% Similarity=0.087 Sum_probs=86.8
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccC----------------ccCCCHHH
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEG----------------VEKPDPRI 177 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~----------------~~kp~~~~ 177 (253)
++.|++.+.+++|++.|+++.++|+.....+..+.+.+|+.. ..++...+.. ...-.|+-
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~----~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~ 590 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA----NDFLLGADIEELSDEELARELRKYHIFARLTPMQ 590 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC----CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHH
Confidence 467899999999999999999999999999999999999974 1222222211 01123344
Q ss_pred HHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCccc--CCHHHHHHHHhh
Q 039449 178 YEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVL--PDLVAVKEFLTS 248 (253)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i--~~l~el~~~l~~ 248 (253)
-.++.+.+. -..+.+.|+||+. ||..+.++|.++.++-. +. +.-.+..+.++ +|+..+...++.
T Consensus 591 K~~iV~~lq-~~G~vVam~GDGv-NDapALk~AdVGIAmg~--gt---dvAk~aADiVLldd~~~~I~~ai~~ 656 (867)
T TIGR01524 591 KSRIIGLLK-KAGHTVGFLGDGI-NDAPALRKADVGISVDT--AA---DIAKEASDIILLEKSLMVLEEGVIE 656 (867)
T ss_pred HHHHHHHHH-hCCCEEEEECCCc-ccHHHHHhCCEEEEeCC--cc---HHHHHhCCEEEecCChHHHHHHHHH
Confidence 445555555 4446799999999 99999999999987743 21 12234455433 578888777764
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=98.09 E-value=1.9e-05 Score=71.16 Aligned_cols=124 Identities=13% Similarity=0.124 Sum_probs=88.4
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCc----------------cCCCHHH
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGV----------------EKPDPRI 177 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~----------------~kp~~~~ 177 (253)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.++...+... ..-.|+-
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~----~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~ 625 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA----GEVLIGSDIETLSDDELANLAERTTLFARLTPMH 625 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc----cCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHH
Confidence 467899999999999999999999999999999999999974 22333322210 1223444
Q ss_pred HHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCccc--CCHHHHHHHHhh
Q 039449 178 YEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVL--PDLVAVKEFLTS 248 (253)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i--~~l~el~~~l~~ 248 (253)
-..+.+.+. -..+-|.|+||+. ||..+.++|.++.++-. +. +.-.+..+.++ +|+..+.+.+..
T Consensus 626 K~~IV~~Lq-~~G~vVam~GDGv-NDaPALk~ADVGIAmg~--gt---dvAkeaADiVLldd~~~~I~~ai~~ 691 (902)
T PRK10517 626 KERIVTLLK-REGHVVGFMGDGI-NDAPALRAADIGISVDG--AV---DIAREAADIILLEKSLMVLEEGVIE 691 (902)
T ss_pred HHHHHHHHH-HCCCEEEEECCCc-chHHHHHhCCEEEEeCC--cC---HHHHHhCCEEEecCChHHHHHHHHH
Confidence 455555555 4456799999999 99999999999887743 21 22234455444 578888777754
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=98.08 E-value=2.3e-05 Score=62.29 Aligned_cols=90 Identities=12% Similarity=0.055 Sum_probs=66.4
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhh---hhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCC
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDV---ILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAP 190 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~---~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~ 190 (253)
.++||+.++|+.|+++|++++++||+....... .++.+|+.. .++.++.+.. .....++..+ ...
T Consensus 44 ~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~--~~~~I~ts~~---------~~~~~l~~~~-~~~ 111 (311)
T PLN02645 44 KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNV--TEEEIFSSSF---------AAAAYLKSIN-FPK 111 (311)
T ss_pred ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCC--ChhhEeehHH---------HHHHHHHhhc-cCC
Confidence 567999999999999999999999998655443 446788865 5555555543 4445566655 544
Q ss_pred CceEEEcCCcccchhhhhhcCCeEEE
Q 039449 191 EEALHIGDSFRKDYVPAKSVGMHALL 216 (253)
Q Consensus 191 ~~~~~iGD~~~~Di~~a~~~G~~~i~ 216 (253)
.+.++++++. .+...++.+|+.++.
T Consensus 112 ~~~V~viG~~-~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 112 DKKVYVIGEE-GILEELELAGFQYLG 136 (311)
T ss_pred CCEEEEEcCH-HHHHHHHHCCCEEec
Confidence 4557777788 699999999998764
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.05 E-value=3.7e-05 Score=70.04 Aligned_cols=127 Identities=10% Similarity=0.056 Sum_probs=87.6
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccC----------------ccCCCHHH
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEG----------------VEKPDPRI 177 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~----------------~~kp~~~~ 177 (253)
++.|++.+.++.|++.|++++++|+.....+..+.+..|+.. .-..++...+.. ...-.|+-
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~--~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~ 656 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILT--FGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLD 656 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCC--CCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHH
Confidence 567899999999999999999999999999999999999964 111222221111 01223344
Q ss_pred HHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccC--CHHHHHHHHhh
Q 039449 178 YEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLP--DLVAVKEFLTS 248 (253)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~--~l~el~~~l~~ 248 (253)
-..+.+.+. -..+.|.|+||+. ||..+.++|.++.++-. .+ .+.-....++++. ++..+..++..
T Consensus 657 K~~iV~~lq-~~g~vVam~GDGv-NDapALk~AdVGIAmg~-~g---tdvAk~aADivL~dd~f~~I~~~i~~ 723 (941)
T TIGR01517 657 KQLLVLMLK-DMGEVVAVTGDGT-NDAPALKLADVGFSMGI-SG---TEVAKEASDIILLDDNFASIVRAVKW 723 (941)
T ss_pred HHHHHHHHH-HCCCEEEEECCCC-chHHHHHhCCcceecCC-Cc---cHHHHHhCCEEEecCCHHHHHHHHHH
Confidence 444555554 3446799999999 99999999998877632 12 1222345565554 88888887753
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.02 E-value=2.7e-05 Score=70.37 Aligned_cols=124 Identities=15% Similarity=0.144 Sum_probs=88.1
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCc----------------cCCCHHH
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGV----------------EKPDPRI 177 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~----------------~kp~~~~ 177 (253)
++.|++.+.+++|++.|+++.++|+.....+..+.+.+|+.. ..++...+... ..-.|+-
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~----~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~ 625 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP----GEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQ 625 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC----CCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHH
Confidence 567899999999999999999999999999999999999974 12222222110 1223444
Q ss_pred HHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCccc--CCHHHHHHHHhh
Q 039449 178 YEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVL--PDLVAVKEFLTS 248 (253)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i--~~l~el~~~l~~ 248 (253)
-.++.+.+. -..+-|.|+||+. ||..+.++|.++.++-. +. +.-.+..+.++ +|+..+...++.
T Consensus 626 K~~iV~~Lq-~~G~vVamtGDGv-NDaPALk~ADVGIAmg~--gt---dvAkeaADiVLldd~f~~Iv~ai~~ 691 (903)
T PRK15122 626 KSRVLKALQ-ANGHTVGFLGDGI-NDAPALRDADVGISVDS--GA---DIAKESADIILLEKSLMVLEEGVIK 691 (903)
T ss_pred HHHHHHHHH-hCCCEEEEECCCc-hhHHHHHhCCEEEEeCc--cc---HHHHHhcCEEEecCChHHHHHHHHH
Confidence 455566665 4456799999999 99999999999876642 21 12234455444 578888877764
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=98.00 E-value=4.4e-05 Score=53.41 Aligned_cols=99 Identities=18% Similarity=0.245 Sum_probs=60.7
Q ss_pred cCCChHHHHHHHHHcCCEEEEEeCCCcch---hhhhhhhc-----CCCCCcceeE--eeecccc-CccCCCHHHHHH-HH
Q 039449 115 VFPDSQPFLRWAREKGLIVGIISNAEYRY---QDVILPAL-----GVNQGTEWDF--GVFSGLE-GVEKPDPRIYEI-AL 182 (253)
Q Consensus 115 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~---~~~~l~~~-----gl~~~~~f~~--~~~~~~~-~~~kp~~~~~~~-~~ 182 (253)
..+|+.++++.++++||++..+|+.+.-. .+..|+.. ++..+..+.. .+++.-. ..-..+|+.|+. ++
T Consensus 28 ~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gpv~~sP~~l~~al~rEvi~~~p~~fK~~~L 107 (157)
T PF08235_consen 28 THPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGPVLLSPDSLFSALHREVISKDPEEFKIACL 107 (157)
T ss_pred hhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCCEEECCcchhhhhhccccccChHHHHHHHH
Confidence 34799999999999999999999998644 45556655 5655333211 0000000 111234444442 23
Q ss_pred HHhCCC----CCCceEEEcCCcccchhhhhhcCCeE
Q 039449 183 ERAGNI----APEEALHIGDSFRKDYVPAKSVGMHA 214 (253)
Q Consensus 183 ~~~~~~----~~~~~~~iGD~~~~Di~~a~~~G~~~ 214 (253)
+.+... ...=...+|++. +|+.+=+++|++.
T Consensus 108 ~~l~~~f~~~~~pf~agfGN~~-tDv~aY~~vGip~ 142 (157)
T PF08235_consen 108 RDLRALFPPDGNPFYAGFGNRS-TDVIAYKAVGIPK 142 (157)
T ss_pred HHHHHhcCCCCCeEEEecCCcH-HHHHHHHHcCCCh
Confidence 332101 223466799999 8999999999975
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=98.00 E-value=5.3e-05 Score=69.45 Aligned_cols=129 Identities=11% Similarity=0.057 Sum_probs=87.9
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcce--------eEeeeccccCc---------------
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEW--------DFGVFSGLEGV--------------- 170 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f--------~~~~~~~~~~~--------------- 170 (253)
++.|++.+.++.|++.|++++++|+.....+..+.+..|+...... ..++...+...
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~V 725 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLV 725 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCeE
Confidence 5678999999999999999999999999999999999999641000 11222222110
Q ss_pred -cCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccC--CHHHHHHHHh
Q 039449 171 -EKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLP--DLVAVKEFLT 247 (253)
Q Consensus 171 -~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~--~l~el~~~l~ 247 (253)
..-.|+--..+.+.+. -..+.+.|+||+. ||..+.++|.++.++-. .+. +......++++. ++..+...+.
T Consensus 726 ~ar~sP~~K~~iV~~lq-~~g~~Vam~GDGv-NDapaLk~AdVGIAmg~-~gt---~vak~aADivl~dd~f~~I~~~i~ 799 (1053)
T TIGR01523 726 IARCAPQTKVKMIEALH-RRKAFCAMTGDGV-NDSPSLKMANVGIAMGI-NGS---DVAKDASDIVLSDDNFASILNAIE 799 (1053)
T ss_pred EEecCHHHHHHHHHHHH-hcCCeeEEeCCCc-chHHHHHhCCccEecCC-Ccc---HHHHHhcCEEEecCCHHHHHHHHH
Confidence 1223444445555555 4456799999999 99999999999887632 121 222445666664 5888887775
Q ss_pred h
Q 039449 248 S 248 (253)
Q Consensus 248 ~ 248 (253)
+
T Consensus 800 ~ 800 (1053)
T TIGR01523 800 E 800 (1053)
T ss_pred H
Confidence 4
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.96 E-value=2.5e-05 Score=62.90 Aligned_cols=101 Identities=19% Similarity=0.295 Sum_probs=85.2
Q ss_pred ccCCC--hHHHHHHHHHcCCEEEEEeCCCc--chhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCC
Q 039449 114 TVFPD--SQPFLRWAREKGLIVGIISNAEY--RYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIA 189 (253)
Q Consensus 114 ~~~~~--~~~~l~~l~~~g~~~~i~s~~~~--~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~ 189 (253)
.++|. ..++.+++.+.|.+|+++|.-.- ..++.++-..|.+. +--.++.|++....|.+...|..+++.-+ ++
T Consensus 97 vLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~d~--~nipiY~S~e~rl~KnSg~LFk~Vlk~En-Vd 173 (635)
T COG5610 97 VLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGPDF--NNIPIYMSSEFRLKKNSGNLFKAVLKLEN-VD 173 (635)
T ss_pred EeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCCCc--cCceeeecceeehhcccchHHHHHHhhcC-CC
Confidence 45554 45889999999999999998854 44677777788775 44456778888888999999999999999 99
Q ss_pred CCceEEEcCCcccchhhhhhcCCeEEEE
Q 039449 190 PEEALHIGDSFRKDYVPAKSVGMHALLV 217 (253)
Q Consensus 190 ~~~~~~iGD~~~~Di~~a~~~G~~~i~~ 217 (253)
+..++++||+...|+.++++.|+.|.+.
T Consensus 174 ~~~w~H~GDN~~aD~l~pk~LgI~Tlf~ 201 (635)
T COG5610 174 PKKWIHCGDNWVADYLKPKNLGISTLFY 201 (635)
T ss_pred hhheEEecCchhhhhcCccccchhHHHH
Confidence 9999999999999999999999998765
|
|
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=97.93 E-value=2.3e-05 Score=55.40 Aligned_cols=80 Identities=15% Similarity=0.098 Sum_probs=59.6
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcce-eEeeeccccCccCCCHHHHHHHHHHhCCCCCC
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEW-DFGVFSGLEGVEKPDPRIYEIALERAGNIAPE 191 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f-~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 191 (253)
..++||+.++|..+++. ++++|+|++....+..+++.++... .+| +.+++.+.... +. .+.+-.-++ .+.+
T Consensus 57 v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~-~~F~~ri~~rd~~~~--~~---~KdL~~i~~-~d~~ 128 (156)
T TIGR02250 57 TKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDG-KYFGDRIISRDESGS--PH---TKSLLRLFP-ADES 128 (156)
T ss_pred EEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCC-CeeccEEEEeccCCC--Cc---cccHHHHcC-CCcc
Confidence 47899999999999966 9999999999999999999998873 267 44444443321 11 111223357 7889
Q ss_pred ceEEEcCCc
Q 039449 192 EALHIGDSF 200 (253)
Q Consensus 192 ~~~~iGD~~ 200 (253)
.+++|+|++
T Consensus 129 ~vvivDd~~ 137 (156)
T TIGR02250 129 MVVIIDDRE 137 (156)
T ss_pred cEEEEeCCH
Confidence 999999999
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.89 E-value=5.2e-05 Score=66.10 Aligned_cols=114 Identities=12% Similarity=0.140 Sum_probs=85.9
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCce
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEA 193 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 193 (253)
.+.|++...+..|++.|++++++|+.+...++...+++|++. ++++.....| ....+++. .....+
T Consensus 723 ~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~~-------V~aev~P~~K------~~~Ik~lq-~~~~~V 788 (951)
T KOG0207|consen 723 QVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGIDN-------VYAEVLPEQK------AEKIKEIQ-KNGGPV 788 (951)
T ss_pred ccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcce-------EEeccCchhh------HHHHHHHH-hcCCcE
Confidence 567899999999999999999999999999999999999887 5555554333 24555665 555789
Q ss_pred EEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCC--cccCCHHHHHHHHh
Q 039449 194 LHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGA--IVLPDLVAVKEFLT 247 (253)
Q Consensus 194 ~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~--~~i~~l~el~~~l~ 247 (253)
.||||.. ||-.+.-++.++.+...+.. -. .+..+ +.-.+|.+++..++
T Consensus 789 aMVGDGI-NDaPALA~AdVGIaig~gs~----vA-ieaADIVLmrn~L~~v~~ai~ 838 (951)
T KOG0207|consen 789 AMVGDGI-NDAPALAQADVGIAIGAGSD----VA-IEAADIVLMRNDLRDVPFAID 838 (951)
T ss_pred EEEeCCC-CccHHHHhhccceeeccccH----HH-HhhCCEEEEccchhhhHHHHH
Confidence 9999999 99999999988877665311 11 22344 34457777776665
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=97.88 E-value=8.3e-05 Score=66.10 Aligned_cols=123 Identities=15% Similarity=0.121 Sum_probs=85.8
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeecccc----------------------Ccc
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLE----------------------GVE 171 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~----------------------~~~ 171 (253)
++.|++.+.++.|++.|++++++|+.....+..+.+.+|+.. . ++...+. ...
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~--~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfA 516 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGT--N---IYTADVLLKGDNRDDLPSGELGEMVEDADGFA 516 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--C---CcCHHHhcCCcchhhCCHHHHHHHHHhCCEEE
Confidence 567899999999999999999999999999999999999974 1 1111111 011
Q ss_pred CCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCC--cccCCHHHHHHHHhh
Q 039449 172 KPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGA--IVLPDLVAVKEFLTS 248 (253)
Q Consensus 172 kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~--~~i~~l~el~~~l~~ 248 (253)
.-.|+--..+.+.+. -..+.+.|+||+. ||..+.++|.+..++-. +. +.-.+..+ ..=+++..+...++.
T Consensus 517 r~~Pe~K~~iV~~lq-~~G~~VamvGDGv-NDapAL~~AdVGIAm~~--gt---dvAkeaADivLl~d~l~~I~~ai~~ 588 (755)
T TIGR01647 517 EVFPEHKYEIVEILQ-KRGHLVGMTGDGV-NDAPALKKADVGIAVAG--AT---DAARSAADIVLTEPGLSVIVDAILE 588 (755)
T ss_pred ecCHHHHHHHHHHHH-hcCCEEEEEcCCc-ccHHHHHhCCeeEEecC--Cc---HHHHHhCCEEEEcCChHHHHHHHHH
Confidence 223444445556665 4557899999999 99999999999877632 21 12233444 333578777777653
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.0022 Score=47.25 Aligned_cols=42 Identities=17% Similarity=0.236 Sum_probs=35.1
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCC
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQ 155 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~ 155 (253)
.++.||+.+.++.|.+. ..-+++|....+.+++..+..|+..
T Consensus 82 a~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Pr 123 (315)
T COG4030 82 AKLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPR 123 (315)
T ss_pred cccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCc
Confidence 37889999999999887 6777899888888888888887754
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00067 Score=49.63 Aligned_cols=40 Identities=28% Similarity=0.281 Sum_probs=26.1
Q ss_pred CccccCceEEEEecCCceeccCCCH--HHHHHHHHHHcCCCC
Q 039449 1 MALLSRLRCITVDVTGTLLAYKGEL--GDYYCMAAKSVGLPC 40 (253)
Q Consensus 1 m~~~~~~k~i~fD~DGTL~~~~~~~--~~~~~~~~~~~g~~~ 40 (253)
|....++.+||.|+||||++....+ ..-+..-+++.|.+.
T Consensus 1 m~s~~~~~lIFtDlD~TLl~~~ye~~pA~pv~~el~d~G~~V 42 (274)
T COG3769 1 MFSIQMPLLIFTDLDGTLLPHSYEWQPAAPVLLELKDAGVPV 42 (274)
T ss_pred CCccccceEEEEcccCcccCCCCCCCccchHHHHHHHcCCeE
Confidence 4445678999999999999922222 223445566777663
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.79 E-value=7e-05 Score=57.40 Aligned_cols=69 Identities=17% Similarity=0.108 Sum_probs=56.0
Q ss_pred CCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhc-------CCeEEEEcCCCCCChhhhhhcCCcccCCHHHHHHH
Q 039449 173 PDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSV-------GMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKEF 245 (253)
Q Consensus 173 p~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~-------G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~~~ 245 (253)
.|..+++.++++++ ++++++++|||+. ||+.+++.+ |..++.+. .+. ......+++++.+++..+
T Consensus 167 ~Kg~a~~~~~~~~~-~~~~~~i~iGD~~-~D~~~~~~~~~~~~~~g~~~v~v~-~g~-----~~~~A~~~~~~~~~v~~~ 238 (244)
T TIGR00685 167 NKGEIVKRLLWHQP-GSGISPVYLGDDI-TDEDAFRVVNNQWGNYGFYPVPIG-SGS-----KKTVAKFHLTGPQQVLEF 238 (244)
T ss_pred CHHHHHHHHHHhcc-cCCCceEEEcCCC-cHHHHHHHHhcccCCCCeEEEEEe-cCC-----cCCCceEeCCCHHHHHHH
Confidence 45699999999999 9999999999999 999999999 66777775 221 122356899999999988
Q ss_pred Hhhh
Q 039449 246 LTSE 249 (253)
Q Consensus 246 l~~~ 249 (253)
|..+
T Consensus 239 L~~l 242 (244)
T TIGR00685 239 LGLL 242 (244)
T ss_pred HHHH
Confidence 8754
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PLN02499 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.003 Score=52.49 Aligned_cols=183 Identities=11% Similarity=0.012 Sum_probs=96.4
Q ss_pred CceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHH
Q 039449 6 RLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFV 85 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (253)
...+++||+||||+.+.+..+..+.-++..-|..- .. .+...+..+...+ ..+. . ..-.+.++-..+
T Consensus 7 ~~~~~~fD~DGTLlrs~ssFpyFmlva~eagG~~R-----~~-~LL~l~P~l~ll~-~~~~----~-~~~lK~mi~v~f- 73 (498)
T PLN02499 7 TSYSVVSELEGTLLKDADPFSYFMLVAFEASGLIR-----FA-LLLFLWPIIRLLD-MLGM----G-DAALKLMIFVAT- 73 (498)
T ss_pred ccceEEEecccceecCCCccHHHHHHHHHhccHHH-----HH-HHHHHhHHHHHHH-hcCC----c-hHHHHHHHHHHh-
Confidence 35789999999999977776666665555555321 00 1111111111000 0010 0 111111222112
Q ss_pred HcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhh-cCCCCCcceeEeee
Q 039449 86 RAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPA-LGVNQGTEWDFGVF 164 (253)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~gl~~~~~f~~~~~ 164 (253)
.| ...++++...+....++... .+.+ +.++..++.| +++++|..+...++..++. +|.+. ..-.-+-
T Consensus 74 -~G--l~~~die~vaRavlpkf~~~---dv~~---e~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~D~--VvGTEL~ 141 (498)
T PLN02499 74 -AG--VHESEIESVARAVLPKFYMD---DVDM---EAWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRADE--VIGSELV 141 (498)
T ss_pred -CC--CCHHHHHHHHHHHhhHHHHh---hCCH---HHHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCCce--EEeeeEE
Confidence 23 34566666666666655432 2222 3566677788 9999999999999999998 88775 2111000
Q ss_pred ccc----cC--ccCCCHHH-HHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEc
Q 039449 165 SGL----EG--VEKPDPRI-YEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVD 218 (253)
Q Consensus 165 ~~~----~~--~~kp~~~~-~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~ 218 (253)
... .| .++...+. ...+.+.++ +....+-+||+. .|-.-..-| +..++.
T Consensus 142 v~~~G~~TG~~~G~n~~ek~~~rl~~~~g--~~~~~vg~~~~~-~~~~f~~~c--k~~~~~ 197 (498)
T PLN02499 142 VNRFGFATGFIRGTDVDQSVANRVANLFV--DERPQLGLGRIS-ASSSFLSLC--KEQIHP 197 (498)
T ss_pred EeeccEEEEEEecCccHHHHHHHHHHHhC--ccCceecccCCc-ccchhhhhC--ceEEec
Confidence 000 01 01233333 334444465 234578899988 787766654 455654
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00028 Score=64.71 Aligned_cols=129 Identities=12% Similarity=0.057 Sum_probs=84.5
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcce----------------------eEeeeccccCc-
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEW----------------------DFGVFSGLEGV- 170 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f----------------------~~~~~~~~~~~- 170 (253)
++.|++.+.++++++.|++++++|+.....+..+.+..|+.....- ..++.+.+...
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l 647 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDM 647 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhC
Confidence 4678999999999999999999999999999999999988531000 01222211110
Q ss_pred -----------------cCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCC
Q 039449 171 -----------------EKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGA 233 (253)
Q Consensus 171 -----------------~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~ 233 (253)
..-.|+--..+.+.+. -..+-|.|+||+. ||+.+.++|.++.++-. .+. +......+
T Consensus 648 ~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq-~~g~vv~~~GDG~-ND~paLk~AdVGiamg~-~G~---~vak~aAD 721 (997)
T TIGR01106 648 TSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQ-RQGAIVAVTGDGV-NDSPALKKADIGVAMGI-AGS---DVSKQAAD 721 (997)
T ss_pred CHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHH-HCCCEEEEECCCc-ccHHHHhhCCcceecCC-ccc---HHHHHhhc
Confidence 1122333333444444 3345799999999 99999999998877632 121 22244566
Q ss_pred cccCC--HHHHHHHHhh
Q 039449 234 IVLPD--LVAVKEFLTS 248 (253)
Q Consensus 234 ~~i~~--l~el~~~l~~ 248 (253)
+++.+ +..+.+.+.+
T Consensus 722 ivL~dd~f~~Iv~ai~~ 738 (997)
T TIGR01106 722 MILLDDNFASIVTGVEE 738 (997)
T ss_pred eEEecCCHHHHHHHHHH
Confidence 65554 8888777654
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00056 Score=46.87 Aligned_cols=94 Identities=17% Similarity=0.228 Sum_probs=61.1
Q ss_pred ccCCChHHHHHHHHHc-C-CEEEEEeCCCcc--------hhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHH
Q 039449 114 TVFPDSQPFLRWAREK-G-LIVGIISNAEYR--------YQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALE 183 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~-g-~~~~i~s~~~~~--------~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~ 183 (253)
.+.|...+-++.++.. | ..+.++||.... .+..+-+..|+.- .-.... || ..-++..+
T Consensus 61 ~Iwp~~l~~ie~~~~vygek~i~v~SNsaG~~~~D~d~s~Ak~le~k~gIpV--------lRHs~k--KP--~ct~E~~~ 128 (190)
T KOG2961|consen 61 AIWPPLLPSIERCKAVYGEKDIAVFSNSAGLTEYDHDDSKAKALEAKIGIPV--------LRHSVK--KP--ACTAEEVE 128 (190)
T ss_pred ccCchhHHHHHHHHHHhCcccEEEEecCcCccccCCchHHHHHHHHhhCCce--------Eeeccc--CC--CccHHHHH
Confidence 4556666667777763 4 678899987432 2333333445542 222222 23 33344444
Q ss_pred HhC----CCCCCceEEEcCCcccchhhhhhcCCeEEEEcC
Q 039449 184 RAG----NIAPEEALHIGDSFRKDYVPAKSVGMHALLVDR 219 (253)
Q Consensus 184 ~~~----~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~ 219 (253)
.+- ...+++++||||++.+||.+|...|.-.||..+
T Consensus 129 y~~~Nshv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~ 168 (190)
T KOG2961|consen 129 YHFGNSHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEP 168 (190)
T ss_pred HHhCCcccCChhHeEEEccchhhhHhhhhhccceeEEecc
Confidence 432 267899999999999999999999999999984
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=97.60 E-value=5.6e-05 Score=56.27 Aligned_cols=46 Identities=17% Similarity=0.116 Sum_probs=41.8
Q ss_pred CccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEE
Q 039449 169 GVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALL 216 (253)
Q Consensus 169 ~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~ 216 (253)
....+|+.+++.++++++ ++++++++|||+. ||+.+++.+|+..++
T Consensus 159 p~~~~K~~~~~~~~~~~~-~~~~~~~~~GD~~-nD~~~~~~~~~~vam 204 (204)
T TIGR01484 159 PAGVDKGSALQALLKELN-GKRDEILAFGDSG-NDEEMFEVAGLAVAV 204 (204)
T ss_pred cCCCChHHHHHHHHHHhC-CCHHHEEEEcCCH-HHHHHHHHcCCceEC
Confidence 446788999999999999 9999999999999 999999999988763
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00021 Score=55.44 Aligned_cols=69 Identities=16% Similarity=0.179 Sum_probs=54.4
Q ss_pred cCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhc----CCeEEEEcCCCCCChhhhhhcCCcccCCHHHHHHHH
Q 039449 171 EKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSV----GMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKEFL 246 (253)
Q Consensus 171 ~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~----G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~~~l 246 (253)
.-.|..+++.+++.++ ++.+++++|||+. ||+.|.+.+ |+. |.+.. .. ....+.+++.+++..+|
T Consensus 172 g~~Kg~al~~ll~~~~-~~~~~v~~~GD~~-nD~~mf~~~~~~~g~~-vavg~-a~-------~~A~~~l~~~~~v~~~L 240 (266)
T PRK10187 172 GTNKGEAIAAFMQEAP-FAGRTPVFVGDDL-TDEAGFAVVNRLGGIS-VKVGT-GA-------TQASWRLAGVPDVWSWL 240 (266)
T ss_pred CCCHHHHHHHHHHhcC-CCCCeEEEEcCCc-cHHHHHHHHHhcCCeE-EEECC-CC-------CcCeEeCCCHHHHHHHH
Confidence 3467899999999999 9999999999999 999999988 544 44431 11 12457999999999888
Q ss_pred hhhh
Q 039449 247 TSEI 250 (253)
Q Consensus 247 ~~~~ 250 (253)
..+.
T Consensus 241 ~~l~ 244 (266)
T PRK10187 241 EMIT 244 (266)
T ss_pred HHHH
Confidence 7654
|
|
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=97.58 E-value=9.3e-05 Score=50.06 Aligned_cols=30 Identities=20% Similarity=0.096 Sum_probs=24.1
Q ss_pred cCCChHHHHHHHHHcCCEEEEEeCCCcchh
Q 039449 115 VFPDSQPFLRWAREKGLIVGIISNAEYRYQ 144 (253)
Q Consensus 115 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~ 144 (253)
+.+.+.+.+++++++|+.++++|+.+....
T Consensus 25 ~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~ 54 (126)
T TIGR01689 25 PILAVIEKLRHYKALGFEIVISSSRNMRTY 54 (126)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCCchhh
Confidence 445677888889899999999999987543
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3 | Back alignment and domain information |
|---|
Probab=97.54 E-value=9e-05 Score=61.19 Aligned_cols=102 Identities=19% Similarity=0.239 Sum_probs=67.9
Q ss_pred cCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhc---------CCCCCcceeEeeeccccC----------------
Q 039449 115 VFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPAL---------GVNQGTEWDFGVFSGLEG---------------- 169 (253)
Q Consensus 115 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~---------gl~~~~~f~~~~~~~~~~---------------- 169 (253)
..|.+..+|+.|++.|.++.++||+.-.++...++++ .+.+ +||.+++.....
T Consensus 184 k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~d--lFDvVIv~A~KP~FF~~~~pfr~vd~~~ 261 (448)
T PF05761_consen 184 KDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRD--LFDVVIVDARKPGFFTEGRPFREVDTET 261 (448)
T ss_dssp --CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGG--CECEEEES--CCHHHCT---EEEEETTT
T ss_pred CCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhh--heeEEEEcCCCCcccCCCCceEEEECCC
Confidence 3567889999999999999999999999988888765 2334 788877654321
Q ss_pred -ccCC-------------CHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhc-CCeEEEEcC
Q 039449 170 -VEKP-------------DPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSV-GMHALLVDR 219 (253)
Q Consensus 170 -~~kp-------------~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~-G~~~i~~~~ 219 (253)
..+. ..--...+.+.++ ...++|++|||+...||...+.. |+.|+.|-+
T Consensus 262 g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~-~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~ 325 (448)
T PF05761_consen 262 GKLKWGKYVGPLEKGKVYSGGNWDQLHKLLG-WRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIP 325 (448)
T ss_dssp SSEECS---SS--TC-EEEE--HHHHHHHCT---GGGEEEEESSTTTTHHHHHHHH-SEEEEE-T
T ss_pred CccccccccccccCCCEeecCCHHHHHHHHc-cCCCeEEEECCchhhhhhhhccccceEEEEEeh
Confidence 0000 0122335566678 88899999999999999977777 999999874
|
1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A .... |
| >KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.0033 Score=49.30 Aligned_cols=101 Identities=20% Similarity=0.213 Sum_probs=67.5
Q ss_pred CChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCc-ceeEeeeccccC-----ccCCC----------------
Q 039449 117 PDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGT-EWDFGVFSGLEG-----VEKPD---------------- 174 (253)
Q Consensus 117 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~-~f~~~~~~~~~~-----~~kp~---------------- 174 (253)
|...++++.|+++|.++.++||.+..++..-++.+=-.+|. +|+.++.-.... ..+|-
T Consensus 243 ~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~wdkv~ 322 (510)
T KOG2470|consen 243 PQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLWDKVD 322 (510)
T ss_pred HHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhhhhhh
Confidence 45678899999999999999999999887666655222222 555544432211 11110
Q ss_pred ---------HHHHHHHHHHhCCCCCCceEEEcCCcccchhhhh-hcCCeEEEEc
Q 039449 175 ---------PRIYEIALERAGNIAPEEALHIGDSFRKDYVPAK-SVGMHALLVD 218 (253)
Q Consensus 175 ---------~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~-~~G~~~i~~~ 218 (253)
.-.+...++.-+ ....+|+++||++.+|+.... +.|+.+..+-
T Consensus 323 klekgkiYy~G~l~~flelt~-WrG~~VlYFGDHlySDLad~tlkhgWRTgAII 375 (510)
T KOG2470|consen 323 KLEKGKIYYQGNLKSFLELTG-WRGPRVLYFGDHLYSDLADLTLKHGWRTGAII 375 (510)
T ss_pred hcccCceeeeccHHHHHHHhc-cCCCeeEEecCcchhhhhhhHhhcccccccch
Confidence 112234455556 778899999999999998776 8898875543
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00097 Score=60.68 Aligned_cols=129 Identities=12% Similarity=0.080 Sum_probs=87.0
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCc----------------cCCCHHH
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGV----------------EKPDPRI 177 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~----------------~kp~~~~ 177 (253)
+|.+++.+.++.|++.|++++++|+.....+..+.+..|+.....-..++.+.+... ..-+|+-
T Consensus 547 ppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~q 626 (917)
T COG0474 547 PPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPEQ 626 (917)
T ss_pred CCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHH
Confidence 577999999999999999999999999999999999999876111011333332211 0223444
Q ss_pred HHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCC--cccCCHHHHHHHHhh
Q 039449 178 YEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGA--IVLPDLVAVKEFLTS 248 (253)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~--~~i~~l~el~~~l~~ 248 (253)
-.++.+.+. -..+-+.|.||+. ||..+.++|.++..+.. .|. +.-....+ ..-+++.-+...+.+
T Consensus 627 K~~IV~~lq-~~g~vVamtGDGv-NDapALk~ADVGIamg~-~Gt---daak~Aadivl~dd~~~~i~~av~e 693 (917)
T COG0474 627 KARIVEALQ-KSGHVVAMTGDGV-NDAPALKAADVGIAMGG-EGT---DAAKEAADIVLLDDNFATIVLAVVE 693 (917)
T ss_pred HHHHHHHHH-hCCCEEEEeCCCc-hhHHHHHhcCccEEecc-cHH---HHHHhhcceEeecCcHHHHHHHHHH
Confidence 444555554 4457899999999 99999999999987765 121 11122333 344566666666654
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0001 Score=56.61 Aligned_cols=43 Identities=14% Similarity=-0.042 Sum_probs=35.0
Q ss_pred ccCCCHHHHHHHHHHhCCCCCCceEEEcC----CcccchhhhhhcCCeEEEEc
Q 039449 170 VEKPDPRIYEIALERAGNIAPEEALHIGD----SFRKDYVPAKSVGMHALLVD 218 (253)
Q Consensus 170 ~~kp~~~~~~~~~~~~~~~~~~~~~~iGD----~~~~Di~~a~~~G~~~i~~~ 218 (253)
.+-.|..+++.+++. ++++++||| +. ||++|.+.+|...+.|.
T Consensus 185 ~gvsKg~al~~L~~~-----~~eviafGD~~~~~~-NDieMl~~~~~~g~~v~ 231 (247)
T PTZ00174 185 KGWDKTYCLRHLEND-----FKEIHFFGDKTFEGG-NDYEIYNDPRTIGHSVK 231 (247)
T ss_pred CCCcHHHHHHHHHhh-----hhhEEEEcccCCCCC-CcHhhhhcCCCceEEeC
Confidence 345667888887777 469999999 88 99999999888777776
|
|
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0015 Score=47.89 Aligned_cols=83 Identities=18% Similarity=0.219 Sum_probs=53.5
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccc----------cCc--cCCCHHHHHHH
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGL----------EGV--EKPDPRIYEIA 181 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~----------~~~--~kp~~~~~~~~ 181 (253)
...|++.++|+++.+. |.++|.|.+....++.++..+++.....+...+.-+. .+. -|+ +..+
T Consensus 45 ~kRP~l~eFL~~~~~~-feIvVwTAa~~~ya~~~l~~l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKd----L~~l 119 (195)
T TIGR02245 45 LMRPYLHEFLTSAYED-YDIVIWSATSMKWIEIKMTELGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKP----LGVI 119 (195)
T ss_pred EeCCCHHHHHHHHHhC-CEEEEEecCCHHHHHHHHHHhcccCCccceEEEEeccccceeeEeeccCcEEEee----cHHh
Confidence 4468999999999985 9999999999999999999887643111111111111 110 122 2222
Q ss_pred HHHhC-CCCCCceEEEcCCcc
Q 039449 182 LERAG-NIAPEEALHIGDSFR 201 (253)
Q Consensus 182 ~~~~~-~~~~~~~~~iGD~~~ 201 (253)
-+.++ ..+.+++++|+|++.
T Consensus 120 w~~l~~~~~~~ntiiVDd~p~ 140 (195)
T TIGR02245 120 WALLPEFYSMKNTIMFDDLRR 140 (195)
T ss_pred hhhcccCCCcccEEEEeCCHH
Confidence 23443 137789999999994
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.002 Score=59.64 Aligned_cols=124 Identities=11% Similarity=0.079 Sum_probs=82.8
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeee-----------------------------
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVF----------------------------- 164 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~----------------------------- 164 (253)
++.|++.+.++.|++.|++++++|+.....+..+.+..|+... -..++.
T Consensus 656 ~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~--~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (1054)
T TIGR01657 656 PLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNP--SNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQV 733 (1054)
T ss_pred CCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC--CceEEEeecccccCCCCceEEEEecCccccccccc
Confidence 5779999999999999999999999999998889999988531 111110
Q ss_pred ------------------------ccccC-------------------ccCCCHHHHHHHHHHhCCCCCCceEEEcCCcc
Q 039449 165 ------------------------SGLEG-------------------VEKPDPRIYEIALERAGNIAPEEALHIGDSFR 201 (253)
Q Consensus 165 ------------------------~~~~~-------------------~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~ 201 (253)
+.... ...-.|+--..+.+.+. -...-+.|+||+.
T Consensus 734 ~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq-~~g~~V~m~GDG~- 811 (1054)
T TIGR01657 734 EIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQ-KLDYTVGMCGDGA- 811 (1054)
T ss_pred cccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHH-hCCCeEEEEeCCh-
Confidence 00000 00112233333344444 3346799999999
Q ss_pred cchhhhhhcCCeEEEEcCCCCCChhhhhhcCC--cccCCHHHHHHHHhh
Q 039449 202 KDYVPAKSVGMHALLVDRFKTPDAKEWRKSGA--IVLPDLVAVKEFLTS 248 (253)
Q Consensus 202 ~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~--~~i~~l~el~~~l~~ 248 (253)
||+.+.++|.++.++-.. . . ....+ ...+++..+..++++
T Consensus 812 ND~~ALK~AdVGIam~~~-d----a--s~AA~f~l~~~~~~~I~~~I~e 853 (1054)
T TIGR01657 812 NDCGALKQADVGISLSEA-E----A--SVAAPFTSKLASISCVPNVIRE 853 (1054)
T ss_pred HHHHHHHhcCcceeeccc-c----c--eeecccccCCCcHHHHHHHHHH
Confidence 999999999988877542 1 1 12233 345688888888875
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00071 Score=55.28 Aligned_cols=89 Identities=11% Similarity=0.095 Sum_probs=66.9
Q ss_pred cCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccC----ccCCCHHHHHHHHHHhCCCCC
Q 039449 115 VFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEG----VEKPDPRIYEIALERAGNIAP 190 (253)
Q Consensus 115 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~----~~kp~~~~~~~~~~~~~~~~~ 190 (253)
++.....++..|+++|+-+++.|-++..-+...+.... +.++..++.. ...||.+-+.+++++++ +..
T Consensus 256 ~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~khp-------~MiLkeedfa~~~iNW~~K~eNirkIAkklN-lg~ 327 (574)
T COG3882 256 AFKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKHP-------DMILKEEDFAVFQINWDPKAENIRKIAKKLN-LGL 327 (574)
T ss_pred hHHHHHHHHHHHHhccEEEEEecCCchhhHHHHHhhCC-------CeEeeHhhhhhheecCCcchhhHHHHHHHhC-CCc
Confidence 34455688889999999999999887766665555431 2222222222 23788999999999999 999
Q ss_pred CceEEEcCCcccchhhhhhcCC
Q 039449 191 EEALHIGDSFRKDYVPAKSVGM 212 (253)
Q Consensus 191 ~~~~~iGD~~~~Di~~a~~~G~ 212 (253)
+..+|++|++ ...+--++-+-
T Consensus 328 dSmvFiDD~p-~ErE~vk~~~~ 348 (574)
T COG3882 328 DSMVFIDDNP-AERELVKRELP 348 (574)
T ss_pred cceEEecCCH-HHHHHHHhcCc
Confidence 9999999999 78888887775
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0015 Score=60.54 Aligned_cols=127 Identities=9% Similarity=0.039 Sum_probs=79.7
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcc-e---------------------------------
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTE-W--------------------------------- 159 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~-f--------------------------------- 159 (253)
++.|++.+.++.|++.|++++++|+.....+..+.+..|+-.... .
T Consensus 631 ~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 710 (1057)
T TIGR01652 631 KLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLG 710 (1057)
T ss_pred hhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhc
Confidence 577999999999999999999999998888777776666643100 0
Q ss_pred -----eEeeeccccC-c---------------------cCCCHHHHHHHHHHhCCCC-CCceEEEcCCcccchhhhhhcC
Q 039449 160 -----DFGVFSGLEG-V---------------------EKPDPRIYEIALERAGNIA-PEEALHIGDSFRKDYVPAKSVG 211 (253)
Q Consensus 160 -----~~~~~~~~~~-~---------------------~kp~~~~~~~~~~~~~~~~-~~~~~~iGD~~~~Di~~a~~~G 211 (253)
..++.+.... . ..-.|+--..+.+.+. -. .+-++++||+. ||+.|.++|.
T Consensus 711 ~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk-~~~~~~vl~iGDG~-ND~~mlk~Ad 788 (1057)
T TIGR01652 711 DSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVK-KSTGKTTLAIGDGA-NDVSMIQEAD 788 (1057)
T ss_pred cCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHH-hcCCCeEEEEeCCC-ccHHHHhhcC
Confidence 0011111000 0 0111111112222232 22 46799999999 9999999998
Q ss_pred CeEEEEcCCCCCChhhhhhcCCcccCCHHHHHHHH
Q 039449 212 MHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKEFL 246 (253)
Q Consensus 212 ~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~~~l 246 (253)
++. .+.+ .... .....+++++.++..|.+++
T Consensus 789 VGI-gi~g--~eg~-qA~~aaD~~i~~F~~L~~ll 819 (1057)
T TIGR01652 789 VGV-GISG--KEGM-QAVMASDFAIGQFRFLTKLL 819 (1057)
T ss_pred eee-EecC--hHHH-HHHHhhhhhhhhHHHHHHHH
Confidence 776 4432 1111 22346788999999888876
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0021 Score=56.06 Aligned_cols=127 Identities=13% Similarity=0.121 Sum_probs=86.4
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCccee----EeeeccccCcc----------------CC
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWD----FGVFSGLEGVE----------------KP 173 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~----~~~~~~~~~~~----------------kp 173 (253)
+|.+++.+.++.+++.|++|..+|+.....+..+.+..|+.. .-+ ..++..++..- .-
T Consensus 584 PPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~--~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~ 661 (972)
T KOG0202|consen 584 PPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFS--EDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARA 661 (972)
T ss_pred CCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCc--CCccccccccchhhhhcCCHHHHHHHhhcceEEEec
Confidence 577899999999999999999999999999999999999875 333 12222222110 12
Q ss_pred CHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCC--cccCCHHHHHHHHhh
Q 039449 174 DPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGA--IVLPDLVAVKEFLTS 248 (253)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~--~~i~~l~el~~~l~~ 248 (253)
.|+--.++.+.|. -..+=+.|-||+. ||-.+.+.|.++.++-- .|.... ++..+ +.=+|++-+...+++
T Consensus 662 ~P~HK~kIVeaLq-~~geivAMTGDGV-NDApALK~AdIGIAMG~-~GTdVa---KeAsDMVL~DDnFstIvaAVEE 732 (972)
T KOG0202|consen 662 EPQHKLKIVEALQ-SRGEVVAMTGDGV-NDAPALKKADIGIAMGI-SGTDVA---KEASDMVLADDNFSTIVAAVEE 732 (972)
T ss_pred CchhHHHHHHHHH-hcCCEEEecCCCc-cchhhhhhcccceeecC-CccHhh---HhhhhcEEecCcHHHHHHHHHH
Confidence 3444445555555 4457799999999 99999999999988753 222211 22344 233466666666653
|
|
| >PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0018 Score=49.44 Aligned_cols=49 Identities=20% Similarity=0.201 Sum_probs=39.3
Q ss_pred CChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccc
Q 039449 117 PDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGL 167 (253)
Q Consensus 117 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~ 167 (253)
|.+.+-|.+|++.|.-+++=|-|+.+.+...++.++|.+ +|+.++..+.
T Consensus 145 ~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~--~Fd~ii~~G~ 193 (297)
T PF05152_consen 145 PAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKLEG--YFDIIICGGN 193 (297)
T ss_pred hHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCCcc--ccEEEEeCCc
Confidence 455677888888888888889888888888888888887 7887766543
|
|
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0019 Score=49.71 Aligned_cols=53 Identities=25% Similarity=0.216 Sum_probs=40.5
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhh---hhhhh-cCCCCCcceeEeeecccc
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQD---VILPA-LGVNQGTEWDFGVFSGLE 168 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~---~~l~~-~gl~~~~~f~~~~~~~~~ 168 (253)
.++||+.++|++|+++|.+++++||++....+ ..++. .+++. ..+.+++|...
T Consensus 24 ~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~--~~~~i~TS~~a 80 (269)
T COG0647 24 EAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDV--TPDDIVTSGDA 80 (269)
T ss_pred ccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCC--CHHHeecHHHH
Confidence 77899999999999999999999999886644 44555 45544 55666666543
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0014 Score=55.85 Aligned_cols=106 Identities=18% Similarity=0.206 Sum_probs=77.1
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCce
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEA 193 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 193 (253)
++.|++.+.+++|++.|++++++|+.....+....+.+|+. ..-.|+.-..+.+.+. -....+
T Consensus 347 ~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi~----------------~~~~p~~K~~~v~~l~-~~g~~v 409 (499)
T TIGR01494 347 PLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGIF----------------ARVTPEEKAALVEALQ-KKGRVV 409 (499)
T ss_pred CCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCce----------------eccCHHHHHHHHHHHH-HCCCEE
Confidence 57799999999999999999999999999999888888761 1123344445555554 444789
Q ss_pred EEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCccc--CCHHHHHHHHh
Q 039449 194 LHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVL--PDLVAVKEFLT 247 (253)
Q Consensus 194 ~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i--~~l~el~~~l~ 247 (253)
.++||.. ||..+.+.+++...+. . ....+.++ .++..+..++.
T Consensus 410 ~~vGDg~-nD~~al~~Advgia~~---------a-~~~adivl~~~~l~~i~~~~~ 454 (499)
T TIGR01494 410 AMTGDGV-NDAPALKKADVGIAMG---------A-KAAADIVLLDDNLSTIVDALK 454 (499)
T ss_pred EEECCCh-hhHHHHHhCCCccccc---------h-HHhCCeEEecCCHHHHHHHHH
Confidence 9999999 9999999998775442 1 22344332 35777666654
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0015 Score=51.20 Aligned_cols=88 Identities=17% Similarity=0.144 Sum_probs=59.7
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchh---hhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCC
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQ---DVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAP 190 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~---~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~ 190 (253)
.++|++.++|++|+++|++++++||+..... ...++.+|+.. ..+.++++ .......+++.. ...
T Consensus 18 ~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~--~~~~i~ts---------~~~~~~~l~~~~-~~~ 85 (279)
T TIGR01452 18 RVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNG--LAEQLFSS---------ALCAARLLRQPP-DAP 85 (279)
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC--ChhhEecH---------HHHHHHHHHhhC-cCC
Confidence 5678999999999999999999999875433 24567778764 22333222 234445555544 445
Q ss_pred CceEEEcCCcccchhhhhhcCCeEE
Q 039449 191 EEALHIGDSFRKDYVPAKSVGMHAL 215 (253)
Q Consensus 191 ~~~~~iGD~~~~Di~~a~~~G~~~i 215 (253)
.+++++|+.. ....++..|+..+
T Consensus 86 ~~v~~iG~~~--~~~~l~~~g~~~~ 108 (279)
T TIGR01452 86 KAVYVIGEEG--LRAELDAAGIRLA 108 (279)
T ss_pred CEEEEEcCHH--HHHHHHHCCCEEe
Confidence 6799999864 4566677887754
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0052 Score=46.48 Aligned_cols=97 Identities=21% Similarity=0.178 Sum_probs=56.1
Q ss_pred CCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeecc-----ccCc----cCC------CH-
Q 039449 112 PYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSG-----LEGV----EKP------DP- 175 (253)
Q Consensus 112 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~-----~~~~----~kp------~~- 175 (253)
.+.+.+|+.++++.|.++++|+.|+|.+-...++..+++.|... ..-. +.|+ +.|. ..| |-
T Consensus 88 ~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~--~Nv~-VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~ 164 (246)
T PF05822_consen 88 DIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFH--PNVK-VVSNFMDFDEDGVLVGFKGPLIHTFNKNE 164 (246)
T ss_dssp ---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--B--TTEE-EEEE-EEE-TTSBEEEE-SS---TT-HHH
T ss_pred chhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCC--CCeE-EEeeeEEECCcceEeecCCCceEEeeCCc
Confidence 35888999999999999999999999999999999999886543 1111 2221 1111 112 11
Q ss_pred HHHH--HHHHHhCCCCCCceEEEcCCcccchhhhhhc-CCeE
Q 039449 176 RIYE--IALERAGNIAPEEALHIGDSFRKDYVPAKSV-GMHA 214 (253)
Q Consensus 176 ~~~~--~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~-G~~~ 214 (253)
..+. ...+.+. .+.+++..||+. -|+.|+.-+ ....
T Consensus 165 ~~l~~~~~~~~~~--~R~NvlLlGDsl-gD~~Ma~G~~~~~~ 203 (246)
T PF05822_consen 165 SALEDSPYFKQLK--KRTNVLLLGDSL-GDLHMADGVPDEEN 203 (246)
T ss_dssp HHHTTHHHHHCTT--T--EEEEEESSS-GGGGTTTT-S--SE
T ss_pred ccccCchHHHHhc--cCCcEEEecCcc-CChHhhcCCCcccc
Confidence 1111 1112222 567899999999 799999877 4443
|
The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A. |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0011 Score=49.29 Aligned_cols=31 Identities=19% Similarity=0.195 Sum_probs=18.6
Q ss_pred HHHHHHHHHcCCEEEEEeCCCcchhhhhhhh
Q 039449 120 QPFLRWAREKGLIVGIISNAEYRYQDVILPA 150 (253)
Q Consensus 120 ~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~ 150 (253)
.+.|++|+++|.+++++|+.....+...++.
T Consensus 23 ~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~ 53 (204)
T TIGR01484 23 IEALERLREAGVKVVLVTGRSLAEIKELLKQ 53 (204)
T ss_pred HHHHHHHHHCCCEEEEECCCCHHHHHHHHHh
Confidence 3555566666666666666666655555544
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.00099 Score=47.46 Aligned_cols=82 Identities=21% Similarity=0.227 Sum_probs=56.7
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCc
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEE 192 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 192 (253)
+.+.||+.++|+++.+. +.++|.|.+....++.+++.+.-. ..+|..+++.+.....+.. . .+-++.++ .+.++
T Consensus 35 v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~~~ldp~-~~~~~~~~~r~~~~~~~~~--~-~KdL~~l~-~~~~~ 108 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVLDALDPN-GKLFSRRLYRDDCTFDKGS--Y-IKDLSKLG-RDLDN 108 (159)
T ss_dssp EEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHHHHHTTT-TSSEEEEEEGGGSEEETTE--E-E--GGGSS-S-GGG
T ss_pred EeeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHHHhhhhh-ccccccccccccccccccc--c-ccchHHHh-hcccc
Confidence 46789999999999766 999999999999999999998763 2378887766544322110 0 13466667 67899
Q ss_pred eEEEcCCc
Q 039449 193 ALHIGDSF 200 (253)
Q Consensus 193 ~~~iGD~~ 200 (253)
+++|+|++
T Consensus 109 vvivDD~~ 116 (159)
T PF03031_consen 109 VVIVDDSP 116 (159)
T ss_dssp EEEEES-G
T ss_pred EEEEeCCH
Confidence 99999999
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >TIGR01658 EYA-cons_domain eyes absent protein conserved domain | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0045 Score=46.23 Aligned_cols=80 Identities=13% Similarity=0.067 Sum_probs=62.4
Q ss_pred EEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCC
Q 039449 133 VGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGM 212 (253)
Q Consensus 133 ~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~ 212 (253)
=++||++.-...-.+.-.+||...+.++.++.+...| |.+.|+.+.+++| -+.-.-++|||+. ....+|+..++
T Consensus 178 NvLVTs~qLVPaLaKcLLy~L~~~f~ieNIYSa~kvG----K~~cFe~I~~Rfg-~p~~~f~~IGDG~-eEe~aAk~l~w 251 (274)
T TIGR01658 178 NVLVTSGQLIPSLAKCLLFRLDTIFRIENVYSSIKVG----KLQCFKWIKERFG-HPKVRFCAIGDGW-EECTAAQAMNW 251 (274)
T ss_pred EEEEEcCccHHHHHHHHHhccCCccccccccchhhcc----hHHHHHHHHHHhC-CCCceEEEeCCCh-hHHHHHHhcCC
Confidence 3678877766655566667888844445555555444 4689999999999 7678899999999 68999999999
Q ss_pred eEEEEc
Q 039449 213 HALLVD 218 (253)
Q Consensus 213 ~~i~~~ 218 (253)
+++-+.
T Consensus 252 PFw~I~ 257 (274)
T TIGR01658 252 PFVKID 257 (274)
T ss_pred CeEEee
Confidence 999887
|
This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0021 Score=49.99 Aligned_cols=36 Identities=11% Similarity=0.014 Sum_probs=24.8
Q ss_pred CChHHHHHHHHH-cCCEEEEEeCCCcchhhhhhhhcC
Q 039449 117 PDSQPFLRWARE-KGLIVGIISNAEYRYQDVILPALG 152 (253)
Q Consensus 117 ~~~~~~l~~l~~-~g~~~~i~s~~~~~~~~~~l~~~g 152 (253)
+...+.|+.|++ .|++++|+|+.+...+...++.++
T Consensus 39 ~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~ 75 (266)
T PRK10187 39 DNILQGLQLLATANDGALALISGRSMVELDALAKPYR 75 (266)
T ss_pred HHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCccc
Confidence 455566777776 577888888888777766665444
|
|
| >KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0057 Score=48.76 Aligned_cols=98 Identities=19% Similarity=0.236 Sum_probs=64.3
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcch------------hhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHH
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRY------------QDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIA 181 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~------------~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~ 181 (253)
.++|.+..=++.+.+.|+.++|.||..... ++.+...+++. |...........+||..-+++..
T Consensus 104 ~l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~anl~vP----i~~~~A~~~~~yRKP~tGMwe~~ 179 (422)
T KOG2134|consen 104 ILFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAIVANLGVP----IQLLAAIIKGKYRKPSTGMWEFL 179 (422)
T ss_pred eeccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHHHHhcCCc----eEEeeeccCCcccCcchhHHHHH
Confidence 345666777888889999999999885421 33444445554 33322222335679999999998
Q ss_pred HHHhC---CCCCCceEEEcCCc--------------ccchhhhhhcCCeEE
Q 039449 182 LERAG---NIAPEEALHIGDSF--------------RKDYVPAKSVGMHAL 215 (253)
Q Consensus 182 ~~~~~---~~~~~~~~~iGD~~--------------~~Di~~a~~~G~~~i 215 (253)
.+.++ .|....+.++||-. ..|+..|.++|+...
T Consensus 180 ~~~~nd~~~Isek~s~fvgdaagr~~~~~~~kkd~S~~D~~FAaN~gvkF~ 230 (422)
T KOG2134|consen 180 KRLENDSVEISEKASIFVGDAAGRPLDALRRKKDHSSADRKFAANAGVKFK 230 (422)
T ss_pred HHHhhccceeeechhhhhhhhccCccccccCcccccHHHHHHHHhcCCccC
Confidence 87775 14455566887732 147778888888754
|
|
| >PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3 | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.014 Score=44.17 Aligned_cols=72 Identities=15% Similarity=0.157 Sum_probs=48.6
Q ss_pred CEEEEEeCCCcchhhhhhh---hcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhh
Q 039449 131 LIVGIISNAEYRYQDVILP---ALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPA 207 (253)
Q Consensus 131 ~~~~i~s~~~~~~~~~~l~---~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a 207 (253)
+++++||..+....++.++ .+|+.- +..++-+.. .| . .+++.++ |+ +|++|.. .-++.|
T Consensus 187 iRtalVTAR~apah~RvI~TLr~Wgv~v----DEafFLgG~--~K--~----~vL~~~~---ph--IFFDDQ~-~H~~~a 248 (264)
T PF06189_consen 187 IRTALVTARSAPAHERVIRTLRSWGVRV----DEAFFLGGL--PK--G----PVLKAFR---PH--IFFDDQD-GHLESA 248 (264)
T ss_pred eEEEEEEcCCCchhHHHHHHHHHcCCcH----hHHHHhCCC--ch--h----HHHHhhC---CC--EeecCch-hhhhHh
Confidence 7899999998876555554 456543 322222222 22 2 4677777 33 9999999 799888
Q ss_pred hhcCCeEEEEcCCCC
Q 039449 208 KSVGMHALLVDRFKT 222 (253)
Q Consensus 208 ~~~G~~~i~~~~~~~ 222 (253)
. .+++++.|+ ++.
T Consensus 249 ~-~~vps~hVP-~gv 261 (264)
T PF06189_consen 249 S-KVVPSGHVP-YGV 261 (264)
T ss_pred h-cCCCEEecc-CCc
Confidence 8 899999998 453
|
1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm |
| >KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.083 Score=42.67 Aligned_cols=100 Identities=16% Similarity=0.179 Sum_probs=71.8
Q ss_pred CChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhc---CCCCCcceeEeeecccc---------------C---------
Q 039449 117 PDSQPFLRWAREKGLIVGIISNAEYRYQDVILPAL---GVNQGTEWDFGVFSGLE---------------G--------- 169 (253)
Q Consensus 117 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~---gl~~~~~f~~~~~~~~~---------------~--------- 169 (253)
+....++..+++.|.++.++||..-......+... +... +|+.+++.... .
T Consensus 201 ~~~v~~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~--yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~~ 278 (424)
T KOG2469|consen 201 GTIVPLLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWET--YFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGDN 278 (424)
T ss_pred CccccchHHHHhhccceEEeeccccchhhHHHHHHhCCCcce--eEEEEEEeccCCccccccceeeeecccccccccccc
Confidence 34555899999999999999999888776555543 4555 77776665311 0
Q ss_pred ------ccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchh-hhhhcCCeEEEEcC
Q 039449 170 ------VEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYV-PAKSVGMHALLVDR 219 (253)
Q Consensus 170 ------~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~-~a~~~G~~~i~~~~ 219 (253)
...+++-....+++.++ ....+++++||+...|+. .-+.-|+.++++.+
T Consensus 279 ~~p~e~~~~ySggs~~~~~~~l~-~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~p 334 (424)
T KOG2469|consen 279 TGPLEQGGVYSGGSLKTVETSMK-VKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAP 334 (424)
T ss_pred CCcchhcccCCcchHHHHHHHhc-ccccceeecccceeeeEEecceecceEEEEEeh
Confidence 11334456667788888 778899999999977776 45666888888773
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.0018 Score=49.60 Aligned_cols=43 Identities=14% Similarity=-0.063 Sum_probs=34.2
Q ss_pred ccCCCHHHHHHHHHHhCCCCCCceEEEcC----CcccchhhhhhcCCeEEEEcC
Q 039449 170 VEKPDPRIYEIALERAGNIAPEEALHIGD----SFRKDYVPAKSVGMHALLVDR 219 (253)
Q Consensus 170 ~~kp~~~~~~~~~~~~~~~~~~~~~~iGD----~~~~Di~~a~~~G~~~i~~~~ 219 (253)
.+-.|..+++.++ +++++++||| +. ||++|.+.-|+.++-|.+
T Consensus 186 ~gvnKg~al~~L~------~~~e~~aFGD~~~~~~-ND~eMl~~~~~~~~~~~~ 232 (245)
T PLN02423 186 QGWDKTYCLQFLE------DFDEIHFFGDKTYEGG-NDHEIFESERTIGHTVTS 232 (245)
T ss_pred CCCCHHHHHHHhc------CcCeEEEEeccCCCCC-CcHHHHhCCCcceEEeCC
Confidence 3445666666666 5789999999 68 999999999998888864
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.024 Score=53.08 Aligned_cols=52 Identities=12% Similarity=0.110 Sum_probs=39.3
Q ss_pred CceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHHHHHHh
Q 039449 191 EEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKEFLT 247 (253)
Q Consensus 191 ~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~~~l~ 247 (253)
+-+++|||+. ||+.|.++|.++. .+.+ ....+ .....|+.++.+.-|.++|-
T Consensus 872 ~vtlaIGDGa-NDv~mIq~AdVGI-GIsG--~EG~q-A~~aSDfaI~~Fr~L~rLLl 923 (1178)
T PLN03190 872 DMTLAIGDGA-NDVSMIQMADVGV-GISG--QEGRQ-AVMASDFAMGQFRFLVPLLL 923 (1178)
T ss_pred cEEEEECCCc-chHHHHHhcCeee-eecC--chhHH-HHHhhccchhhhHHHHHHHH
Confidence 4699999999 9999999998776 5542 22122 23467899999999988875
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.0032 Score=52.07 Aligned_cols=89 Identities=13% Similarity=0.108 Sum_probs=73.1
Q ss_pred cCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceE
Q 039449 115 VFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEAL 194 (253)
Q Consensus 115 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~ 194 (253)
+.||++|-+.+|++.|++.+.+|+.++-.+..+.+..|+++ +..+.. |+---.++++.. -+.+=+.
T Consensus 448 vK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDd-------fiAeat------PEdK~~~I~~eQ-~~grlVA 513 (681)
T COG2216 448 VKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD-------FIAEAT------PEDKLALIRQEQ-AEGRLVA 513 (681)
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchh-------hhhcCC------hHHHHHHHHHHH-hcCcEEE
Confidence 56899999999999999999999999998999999999998 343332 344446677776 6777899
Q ss_pred EEcCCcccchhhhhhcCCeEEEEc
Q 039449 195 HIGDSFRKDYVPAKSVGMHALLVD 218 (253)
Q Consensus 195 ~iGD~~~~Di~~a~~~G~~~i~~~ 218 (253)
|.||.- ||-.+..++....++=+
T Consensus 514 MtGDGT-NDAPALAqAdVg~AMNs 536 (681)
T COG2216 514 MTGDGT-NDAPALAQADVGVAMNS 536 (681)
T ss_pred EcCCCC-Ccchhhhhcchhhhhcc
Confidence 999999 99999999988766644
|
|
| >KOG3128 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.01 Score=44.53 Aligned_cols=97 Identities=12% Similarity=0.075 Sum_probs=58.7
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcC-CCCCcceeEee-eccccCc----cCC-------CHHHHH
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALG-VNQGTEWDFGV-FSGLEGV----EKP-------DPRIYE 179 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~g-l~~~~~f~~~~-~~~~~~~----~kp-------~~~~~~ 179 (253)
+.+.+|..+++..|.++++++.++|.+....++.++.+.. +.+..+|-.-+ -..+.+. .+| ....++
T Consensus 137 i~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~pn~k~vSN~~~F~edg~l~gF~~~Lihtfnkn~~v~~ 216 (298)
T KOG3128|consen 137 IALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHPNVKFVSNYMDFDEDGNLCGFSQPLIHTFNKNSSVLQ 216 (298)
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCccHHhhhhhhhhcccchhhhhhHHHHHHHccchHHHH
Confidence 3556789999999999999999999999888877776553 32211110000 0111111 111 111222
Q ss_pred HHHHHhC-CCCCCceEEEcCCcccchhhhhhc
Q 039449 180 IALERAG-NIAPEEALHIGDSFRKDYVPAKSV 210 (253)
Q Consensus 180 ~~~~~~~-~~~~~~~~~iGD~~~~Di~~a~~~ 210 (253)
...+.+. .-+...+++.||+. -|+.|+.-+
T Consensus 217 ~~s~yf~~~~~~~nVillGdsi-gdl~ma~gv 247 (298)
T KOG3128|consen 217 NESEYFHQLAGRVNVILLGDSI-GDLHMADGV 247 (298)
T ss_pred hhhHHHhhccCCceEEEecccc-ccchhhcCC
Confidence 2233332 13567899999999 799998755
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.011 Score=48.02 Aligned_cols=67 Identities=28% Similarity=0.289 Sum_probs=45.7
Q ss_pred CHHHHHHHHHHhCCCCCCc---eEEEcCCcccchhhhhh-----cCCeEEEEcCCCCCChhhhhhcCCcccCCHHHHHHH
Q 039449 174 DPRIYEIALERAGNIAPEE---ALHIGDSFRKDYVPAKS-----VGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKEF 245 (253)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~---~~~iGD~~~~Di~~a~~-----~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~~~ 245 (253)
|..+++.+++.++ ++..+ +++|||.. ||..+.+. .|+.. .+.. +.. .....+.+++.+|+..+
T Consensus 302 KG~Av~~Ll~~~g-~~~~d~~~pi~iGDD~-TDedmF~~L~~~~~G~~I-~Vgn-~~~-----~t~A~y~L~dp~eV~~~ 372 (384)
T PLN02580 302 KGKAVEFLLESLG-LSNCDDVLPIYIGDDR-TDEDAFKVLREGNRGYGI-LVSS-VPK-----ESNAFYSLRDPSEVMEF 372 (384)
T ss_pred HHHHHHHHHHhcC-CCcccceeEEEECCCc-hHHHHHHhhhccCCceEE-EEec-CCC-----CccceEEcCCHHHHHHH
Confidence 4566667777777 66553 38999999 99999996 35543 3331 111 11245899999999998
Q ss_pred Hhhh
Q 039449 246 LTSE 249 (253)
Q Consensus 246 l~~~ 249 (253)
|+.+
T Consensus 373 L~~L 376 (384)
T PLN02580 373 LKSL 376 (384)
T ss_pred HHHH
Confidence 8764
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.03 Score=43.13 Aligned_cols=102 Identities=13% Similarity=0.163 Sum_probs=63.1
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCC---cchhhhhhhhcCCCCCcceeEeeeccccC-----ccCCC-------HHHH
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAE---YRYQDVILPALGVNQGTEWDFGVFSGLEG-----VEKPD-------PRIY 178 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~---~~~~~~~l~~~gl~~~~~f~~~~~~~~~~-----~~kp~-------~~~~ 178 (253)
.+.|++.+.+++|+++|++++++||+. .......++.+|++. ..+.++++...- ..++. ...+
T Consensus 17 ~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~--~~~~iit~~~~~~~~l~~~~~~~~v~~lg~~~l 94 (249)
T TIGR01457 17 ERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPA--TLETVFTASMATADYMNDLKLEKTVYVIGEEGL 94 (249)
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC--ChhhEeeHHHHHHHHHHhcCCCCEEEEEcChhH
Confidence 445789999999999999999999955 344566778888876 556666654321 11111 1345
Q ss_pred HHHHHHhCCCC----CCceEEEcCCcccchhhh------hhcCCeEEEEc
Q 039449 179 EIALERAGNIA----PEEALHIGDSFRKDYVPA------KSVGMHALLVD 218 (253)
Q Consensus 179 ~~~~~~~~~~~----~~~~~~iGD~~~~Di~~a------~~~G~~~i~~~ 218 (253)
...++.+| +. ..+.+++|.....+..-. .+.|+..+..+
T Consensus 95 ~~~l~~~g-~~~~~~~~~~Vvvg~~~~~~y~~l~~a~~~l~~g~~~i~tN 143 (249)
T TIGR01457 95 KEAIKEAG-YVEDKEKPDYVVVGLDRQIDYEKFATATLAIRKGAHFIGTN 143 (249)
T ss_pred HHHHHHcC-CEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCeEEEEC
Confidence 56667666 43 235666766432333221 24588866666
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.089 Score=40.47 Aligned_cols=102 Identities=15% Similarity=0.178 Sum_probs=61.7
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhh---hhhhhcCCCCCcceeEeeeccccCc----cC-------CCHHHHH
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQD---VILPALGVNQGTEWDFGVFSGLEGV----EK-------PDPRIYE 179 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~---~~l~~~gl~~~~~f~~~~~~~~~~~----~k-------p~~~~~~ 179 (253)
.+.|++.++++.|+++|++++++||+...... ..++.+|+.- --+.++++...-. .+ .-...+.
T Consensus 17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~--~~~~i~ts~~~~~~~L~~~~~~~v~~~g~~~l~ 94 (248)
T PRK10444 17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDV--PDSVFYTSAMATADFLRRQEGKKAYVIGEGALI 94 (248)
T ss_pred eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC--CHhhEecHHHHHHHHHHhCCCCEEEEEcCHHHH
Confidence 56799999999999999999999999886544 4455567743 2344455432110 00 0113444
Q ss_pred HHHHHhCCCC----CCceEEEcCCcccchhhhh------hcCCeEEEEc
Q 039449 180 IALERAGNIA----PEEALHIGDSFRKDYVPAK------SVGMHALLVD 218 (253)
Q Consensus 180 ~~~~~~~~~~----~~~~~~iGD~~~~Di~~a~------~~G~~~i~~~ 218 (253)
..++..| +. ..+++++|.....+..... +-|...+..+
T Consensus 95 ~~l~~~g-~~~~~~~~~~Vvvg~~~~~~~~~l~~a~~~l~~g~~~i~~n 142 (248)
T PRK10444 95 HELYKAG-FTITDINPDFVIVGETRSYNWDMMHKAAYFVANGARFIATN 142 (248)
T ss_pred HHHHHCc-CEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEEC
Confidence 5555555 33 2367888877633433222 3387777766
|
|
| >KOG1618 consensus Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.065 Score=41.87 Aligned_cols=86 Identities=13% Similarity=0.116 Sum_probs=51.6
Q ss_pred ccCCChHHHHHHHHHc----CCEEEEEeCCCcch----hhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHh
Q 039449 114 TVFPDSQPFLRWAREK----GLIVGIISNAEYRY----QDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERA 185 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~----g~~~~i~s~~~~~~----~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~ 185 (253)
++.|++.+.++.|.+. .++.+++||+.-.. +..+-+.+|..- ....+-.+ . .-|+.+. +
T Consensus 51 ~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~lS~~Lgv~V--------s~dqviqS-H--sP~r~l~-~- 117 (389)
T KOG1618|consen 51 RPIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQELSALLGVEV--------SADQVIQS-H--SPFRLLV-E- 117 (389)
T ss_pred CCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHHHHhhCCcc--------CHHHHHhh-c--ChHHHHh-h-
Confidence 4456677777777665 58999999996643 333444455542 22222111 0 1232333 2
Q ss_pred CCCCCCceEEEcCCcccchhhhhhcCCeEEE
Q 039449 186 GNIAPEEALHIGDSFRKDYVPAKSVGMHALL 216 (253)
Q Consensus 186 ~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~ 216 (253)
..-+.++++|+.. --..|+..|.+.|.
T Consensus 118 --~~~k~vLv~G~~~--vr~vAegyGFk~Vv 144 (389)
T KOG1618|consen 118 --YHYKRVLVVGQGS--VREVAEGYGFKNVV 144 (389)
T ss_pred --hhhceEEEecCCc--HHHHhhccCcccee
Confidence 2347899999766 57788899998764
|
|
| >KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.084 Score=45.23 Aligned_cols=95 Identities=13% Similarity=0.008 Sum_probs=54.1
Q ss_pred ChHHHHHHHHHcCCEEEEEeCCCcch---hhhhhhhcCCCCCcceeE-eeecc---------ccCccCC---CHHHHHHH
Q 039449 118 DSQPFLRWAREKGLIVGIISNAEYRY---QDVILPALGVNQGTEWDF-GVFSG---------LEGVEKP---DPRIYEIA 181 (253)
Q Consensus 118 ~~~~~l~~l~~~g~~~~i~s~~~~~~---~~~~l~~~gl~~~~~f~~-~~~~~---------~~~~~kp---~~~~~~~~ 181 (253)
|+..+...++++||++..+|....-+ .+..|+.+.-+...+-+. ++.+. ++-..|| |..++..+
T Consensus 562 GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LPdGPViLSPd~lf~Al~REVI~RkPe~FKIAcL~DI 641 (738)
T KOG2116|consen 562 GVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLPDGPVILSPDSLFAALHREVIERKPEVFKIACLTDI 641 (738)
T ss_pred hHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCCCCCEEeCCCcchHHHHHHHHHcCchhhhHHHHHHH
Confidence 66677777788888888888775543 334444432222111111 12221 1222355 33444454
Q ss_pred HHHhCCCCCC-ceEEEcCCcccchhhhhhcCCeE
Q 039449 182 LERAGNIAPE-EALHIGDSFRKDYVPAKSVGMHA 214 (253)
Q Consensus 182 ~~~~~~~~~~-~~~~iGD~~~~Di~~a~~~G~~~ 214 (253)
.+.+. -+.+ =...||++. +|+..=+++|++.
T Consensus 642 k~LF~-p~~nPFYAgFGNR~-TDviSY~~VgVP~ 673 (738)
T KOG2116|consen 642 KNLFP-PSGNPFYAGFGNRI-TDVISYRQVGVPL 673 (738)
T ss_pred HHhcC-CCCCceeeecCCCc-ccceeeeeecCCc
Confidence 55554 2222 366799999 9999999999987
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.044 Score=44.65 Aligned_cols=30 Identities=27% Similarity=0.225 Sum_probs=19.5
Q ss_pred ceEEEEecCCceeccCC-----CHHHHHHHHHHHc
Q 039449 7 LRCITVDVTGTLLAYKG-----ELGDYYCMAAKSV 36 (253)
Q Consensus 7 ~k~i~fD~DGTL~~~~~-----~~~~~~~~~~~~~ 36 (253)
--+++||+||||.+... .....+..+++++
T Consensus 119 ~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~L 153 (384)
T PLN02580 119 KIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNV 153 (384)
T ss_pred CeEEEEecCCccCCCCCCcccccCCHHHHHHHHHH
Confidence 45889999999986543 2234455555554
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.018 Score=46.30 Aligned_cols=68 Identities=25% Similarity=0.244 Sum_probs=41.7
Q ss_pred HHHHHHHHHHhCCCCCC---ceEEEcCCcccchhhhhhcCC----eEEEEcCCCCCChhhhhhcCCcccCCHHHHHHHHh
Q 039449 175 PRIYEIALERAGNIAPE---EALHIGDSFRKDYVPAKSVGM----HALLVDRFKTPDAKEWRKSGAIVLPDLVAVKEFLT 247 (253)
Q Consensus 175 ~~~~~~~~~~~~~~~~~---~~~~iGD~~~~Di~~a~~~G~----~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~~~l~ 247 (253)
..+++.+++.++ .... -++||||.. +|-.+.+.+.- -.|.|.. +.. .....+.+++.+|+..+|+
T Consensus 271 G~Av~~Ll~~~~-~~~~~~~~pvyiGDD~-TDEDaF~~L~~~~~G~gI~Vg~-~~k-----~T~A~y~L~dp~eV~~~L~ 342 (354)
T PLN02151 271 GKALEFLLESLG-YANCTDVFPIYIGDDR-TDEDAFKILRDKKQGLGILVSK-YAK-----ETNASYSLQEPDEVMEFLE 342 (354)
T ss_pred HHHHHHHHHhcc-cccCCCCeEEEEcCCC-cHHHHHHHHhhcCCCccEEecc-CCC-----CCcceEeCCCHHHHHHHHH
Confidence 344444555444 3222 289999999 99999886521 1244431 111 1134589999999999887
Q ss_pred hhh
Q 039449 248 SEI 250 (253)
Q Consensus 248 ~~~ 250 (253)
.+.
T Consensus 343 ~L~ 345 (354)
T PLN02151 343 RLV 345 (354)
T ss_pred HHH
Confidence 653
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.027 Score=43.60 Aligned_cols=51 Identities=20% Similarity=0.136 Sum_probs=39.2
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcch---hhhhhhhcCCCCCcceeEeeecc
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRY---QDVILPALGVNQGTEWDFGVFSG 166 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~---~~~~l~~~gl~~~~~f~~~~~~~ 166 (253)
.+.|++.+.+++|+++|++++++||++... ....++.+|++- -.+.++++.
T Consensus 21 ~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~--~~~~i~ts~ 74 (257)
T TIGR01458 21 VAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDI--SEDEVFTPA 74 (257)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCC--CHHHeEcHH
Confidence 367899999999999999999999987764 555677778764 335555543
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.32 E-value=1.3 Score=41.47 Aligned_cols=30 Identities=3% Similarity=0.057 Sum_probs=26.7
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcch
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRY 143 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~ 143 (253)
++-+|+.+.+..|++.|++++++|+...+.
T Consensus 651 kLQdgVPetI~~L~~AGIKIWVLTGDK~ET 680 (1151)
T KOG0206|consen 651 KLQDGVPETIAKLAQAGIKIWVLTGDKQET 680 (1151)
T ss_pred hhccCchHHHHHHHHcCCEEEEEcCcHHHH
Confidence 567899999999999999999999996554
|
|
| >COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.011 Score=40.19 Aligned_cols=105 Identities=18% Similarity=0.147 Sum_probs=62.5
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCc--chhhhhhh----hcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhC
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEY--RYQDVILP----ALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAG 186 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~--~~~~~~l~----~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~ 186 (253)
..+.|++.+++++|.+. +.++|+|.... ...+.+.+ .+..-+ ...+++++..+.- +.+
T Consensus 67 L~V~p~aq~v~keLt~~-y~vYivtaamdhp~s~~dK~eWl~E~FPFi~---~qn~vfCgnKniv------------kaD 130 (180)
T COG4502 67 LGVQPFAQTVLKELTSI-YNVYIVTAAMDHPKSCEDKGEWLKEKFPFIS---YQNIVFCGNKNIV------------KAD 130 (180)
T ss_pred cCccccHHHHHHHHHhh-heEEEEEeccCCchhHHHHHHHHHHHCCCCC---hhhEEEecCCCeE------------Eee
Confidence 36789999999999988 89999998732 22333333 333222 1233444433311 223
Q ss_pred CCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHHHHHHhhh
Q 039449 187 NIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKEFLTSE 249 (253)
Q Consensus 187 ~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~~~l~~~ 249 (253)
++|+|++ ..++..+ |.+ |+.+..... .+....++.||.|+...+...
T Consensus 131 -------ilIDDnp-~nLE~F~--G~k-IlFdA~HN~-----nenRF~Rv~~W~e~eq~ll~~ 177 (180)
T COG4502 131 -------ILIDDNP-LNLENFK--GNK-ILFDAHHNK-----NENRFVRVRDWYEAEQALLES 177 (180)
T ss_pred -------EEecCCc-hhhhhcc--Cce-EEEeccccc-----CccceeeeccHHHHHHHHHHh
Confidence 7899999 5776654 544 444421111 123457899999998666544
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.057 Score=48.37 Aligned_cols=67 Identities=21% Similarity=0.150 Sum_probs=49.9
Q ss_pred CCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCC--eEEEEcCCCCCChhhhhhcCCcccCCHHHHHHHHhhh
Q 039449 172 KPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGM--HALLVDRFKTPDAKEWRKSGAIVLPDLVAVKEFLTSE 249 (253)
Q Consensus 172 kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~--~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~~~l~~~ 249 (253)
-.|..+++.+++ + ++++.++++||+. ||+.|.+.++. .++.+.. . .....+++.+.+|+..+|+..
T Consensus 656 vnKG~al~~ll~--~-~~~d~vl~~GD~~-nDe~Mf~~~~~~~~~v~vG~-~-------~s~A~~~l~~~~eV~~~L~~l 723 (726)
T PRK14501 656 VNKGRAVRRLLE--A-GPYDFVLAIGDDT-TDEDMFRALPETAITVKVGP-G-------ESRARYRLPSQREVRELLRRL 723 (726)
T ss_pred CCHHHHHHHHHh--c-CCCCEEEEECCCC-ChHHHHHhcccCceEEEECC-C-------CCcceEeCCCHHHHHHHHHHH
Confidence 457788888888 6 7788999999999 99999999742 2333321 1 123458999999998888765
Q ss_pred h
Q 039449 250 I 250 (253)
Q Consensus 250 ~ 250 (253)
.
T Consensus 724 ~ 724 (726)
T PRK14501 724 L 724 (726)
T ss_pred h
Confidence 4
|
|
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.042 Score=42.40 Aligned_cols=43 Identities=12% Similarity=0.104 Sum_probs=29.1
Q ss_pred CHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcC---CeEEEEc
Q 039449 174 DPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVG---MHALLVD 218 (253)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G---~~~i~~~ 218 (253)
|..++..+++... .+..-+++.||.. +|-.+...+. -.++-+.
T Consensus 183 KG~a~~~i~~~~~-~~~~~~~~aGDD~-TDE~~F~~v~~~~~~~v~v~ 228 (266)
T COG1877 183 KGAAIKYIMDELP-FDGRFPIFAGDDL-TDEDAFAAVNKLDSITVKVG 228 (266)
T ss_pred hHHHHHHHHhcCC-CCCCcceecCCCC-ccHHHHHhhccCCCceEEec
Confidence 4455555565555 4444699999999 8999888886 4445444
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=94.87 E-value=0.038 Score=49.45 Aligned_cols=36 Identities=19% Similarity=0.143 Sum_probs=27.1
Q ss_pred CChHHHHHHHHH-cCCEEEEEeCCCcchhhhhhhhcC
Q 039449 117 PDSQPFLRWARE-KGLIVGIISNAEYRYQDVILPALG 152 (253)
Q Consensus 117 ~~~~~~l~~l~~-~g~~~~i~s~~~~~~~~~~l~~~g 152 (253)
+.+.+.|+.|.+ .|..++++|+.....++..+..++
T Consensus 517 ~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~ 553 (726)
T PRK14501 517 KELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLP 553 (726)
T ss_pred HHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCC
Confidence 455677888888 488999999998887776665544
|
|
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.32 Score=37.85 Aligned_cols=92 Identities=14% Similarity=0.073 Sum_probs=58.2
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhh---hcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCC
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILP---ALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAP 190 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~---~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~ 190 (253)
.+.||+.+.++.|++.|.++.++||++....+..++ .+|+.. +..+.. ..| ......-+++.. ...
T Consensus 38 ~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~~-------v~e~~i--~ss-a~~~a~ylk~~~-~~~ 106 (306)
T KOG2882|consen 38 KPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFNS-------VKEENI--FSS-AYAIADYLKKRK-PFG 106 (306)
T ss_pred CCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCccc-------cCcccc--cCh-HHHHHHHHHHhC-cCC
Confidence 667999999999999999999999999877655444 455543 111111 111 122223333333 345
Q ss_pred CceEEEcCCcccchhhhhhcCCeEEEEc
Q 039449 191 EEALHIGDSFRKDYVPAKSVGMHALLVD 218 (253)
Q Consensus 191 ~~~~~iGD~~~~Di~~a~~~G~~~i~~~ 218 (253)
+.+.++|-.. =-+.++++|+......
T Consensus 107 k~Vyvig~~g--i~~eL~~aG~~~~g~~ 132 (306)
T KOG2882|consen 107 KKVYVIGEEG--IREELDEAGFEYFGGG 132 (306)
T ss_pred CeEEEecchh--hhHHHHHcCceeecCC
Confidence 6788887665 3556778887666555
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.63 E-value=0.59 Score=40.87 Aligned_cols=52 Identities=13% Similarity=0.135 Sum_probs=34.2
Q ss_pred CCceEEEcCCcccchhhhhhcCCeEEEEc-CCCCCChhhhhhcCCcccCCHHHHHHHHh
Q 039449 190 PEEALHIGDSFRKDYVPAKSVGMHALLVD-RFKTPDAKEWRKSGAIVLPDLVAVKEFLT 247 (253)
Q Consensus 190 ~~~~~~iGD~~~~Di~~a~~~G~~~i~~~-~~~~~~~~~~~~~~~~~i~~l~el~~~l~ 247 (253)
...+..|||+- ||+.|...|.++ |++. ..| .+..-+.++.|..+..+.++|.
T Consensus 781 ~krvc~IGDGG-NDVsMIq~A~~G-iGI~gkEG----kQASLAADfSItqF~Hv~rLLl 833 (1051)
T KOG0210|consen 781 GKRVCAIGDGG-NDVSMIQAADVG-IGIVGKEG----KQASLAADFSITQFSHVSRLLL 833 (1051)
T ss_pred CceEEEEcCCC-ccchheeecccc-eeeecccc----cccchhccccHHHHHHHHHHhh
Confidence 36899999999 999998887655 3333 112 1112345677777777766664
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=94.03 E-value=0.21 Score=45.49 Aligned_cols=70 Identities=20% Similarity=0.162 Sum_probs=50.6
Q ss_pred CCCHHHHHHHHHH---hCCCCCCceEEEcCCcccchhhhhhcCC-------------eEEEEcCCCCCChhhhhhcCCcc
Q 039449 172 KPDPRIYEIALER---AGNIAPEEALHIGDSFRKDYVPAKSVGM-------------HALLVDRFKTPDAKEWRKSGAIV 235 (253)
Q Consensus 172 kp~~~~~~~~~~~---~~~~~~~~~~~iGD~~~~Di~~a~~~G~-------------~~i~~~~~~~~~~~~~~~~~~~~ 235 (253)
-.|..+++.+++. ++ ++++.+++|||+. ||..|.+.++- -+|-|. .+ .....+.
T Consensus 761 vnKG~Al~~Ll~~~~~~g-~~~d~vl~~GDD~-nDedMF~~~~~~~~g~~~~~~~~~~~v~VG-~~-------~S~A~y~ 830 (854)
T PLN02205 761 VSKGLVAKRLLSIMQERG-MLPDFVLCIGDDR-SDEDMFEVITSSMAGPSIAPRAEVFACTVG-QK-------PSKAKYY 830 (854)
T ss_pred CCHHHHHHHHHHHHHhcC-CCcccEEEEcCCc-cHHHHHHHhhhhccCCcccccccceeEEEC-CC-------CccCeEe
Confidence 4566788888754 57 8899999999999 99999998862 223332 11 1223478
Q ss_pred cCCHHHHHHHHhhhhh
Q 039449 236 LPDLVAVKEFLTSEIS 251 (253)
Q Consensus 236 i~~l~el~~~l~~~~~ 251 (253)
+++.+|+.++|..+.+
T Consensus 831 L~d~~eV~~lL~~L~~ 846 (854)
T PLN02205 831 LDDTAEIVRLMQGLAS 846 (854)
T ss_pred cCCHHHHHHHHHHHHh
Confidence 9999999999886543
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=93.73 E-value=0.095 Score=40.25 Aligned_cols=32 Identities=28% Similarity=0.222 Sum_probs=23.3
Q ss_pred cCceEEE-EecCCceeccCCCHHHHHHHHHHHc
Q 039449 5 SRLRCIT-VDVTGTLLAYKGELGDYYCMAAKSV 36 (253)
Q Consensus 5 ~~~k~i~-fD~DGTL~~~~~~~~~~~~~~~~~~ 36 (253)
++++.++ ||+||||++....+.+....+++++
T Consensus 4 ~~~~~i~~~D~DGTLl~~~~~i~~~~~~ai~~l 36 (245)
T PLN02423 4 RKPGVIALFDVDGTLTAPRKEATPEMLEFMKEL 36 (245)
T ss_pred CccceEEEEeccCCCcCCCCcCCHHHHHHHHHH
Confidence 3567555 9999999998876666666665554
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=93.68 E-value=0.11 Score=39.97 Aligned_cols=36 Identities=17% Similarity=0.157 Sum_probs=27.2
Q ss_pred cCceEEEEecCCceeccCCCHHHHHHHHHHH---cCCCC
Q 039449 5 SRLRCITVDVTGTLLAYKGELGDYYCMAAKS---VGLPC 40 (253)
Q Consensus 5 ~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~---~g~~~ 40 (253)
|++|+|+||+||||+++...+.+...+++++ .|+..
T Consensus 3 ~~~klia~DlDGTLL~~~~~is~~~~~ai~~l~~~Gi~~ 41 (247)
T PTZ00174 3 MKKTILLFDVDGTLTKPRNPITQEMKDTLAKLKSKGFKI 41 (247)
T ss_pred CCCeEEEEECcCCCcCCCCCCCHHHHHHHHHHHHCCCEE
Confidence 5689999999999999988666666665554 45543
|
|
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.64 E-value=0.53 Score=34.67 Aligned_cols=88 Identities=17% Similarity=0.184 Sum_probs=53.4
Q ss_pred cCCChHHHHHHHHHcCCEEEEEeCCCcch---hhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCC
Q 039449 115 VFPDSQPFLRWAREKGLIVGIISNAEYRY---QDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPE 191 (253)
Q Consensus 115 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~---~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 191 (253)
..||+.+.++.|+.++.++-.+||...+. +...|+++|+.- ..++.-.+.| +-.+.+++-+ +.|
T Consensus 24 avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v--------~eeei~tsl~---aa~~~~~~~~-lrP- 90 (262)
T KOG3040|consen 24 AVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDV--------SEEEIFTSLP---AARQYLEENQ-LRP- 90 (262)
T ss_pred cCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCc--------cHHHhcCccH---HHHHHHHhcC-CCc-
Confidence 35899999999999999999999998866 445566667653 2222222222 3334455544 433
Q ss_pred ceEEEcCCcccchhhhhhcCCeEEE
Q 039449 192 EALHIGDSFRKDYVPAKSVGMHALL 216 (253)
Q Consensus 192 ~~~~iGD~~~~Di~~a~~~G~~~i~ 216 (253)
-++|.|....|........-.+|.
T Consensus 91 -~l~v~d~a~~dF~gidTs~pn~VV 114 (262)
T KOG3040|consen 91 -YLIVDDDALEDFDGIDTSDPNCVV 114 (262)
T ss_pred -eEEEcccchhhCCCccCCCCCeEE
Confidence 355555555565554444444443
|
|
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.52 E-value=0.88 Score=40.77 Aligned_cols=124 Identities=14% Similarity=0.133 Sum_probs=79.9
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCccee-Ee-eeccccC------------------ccCC
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWD-FG-VFSGLEG------------------VEKP 173 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~-~~-~~~~~~~------------------~~kp 173 (253)
+..||+.+.++.+++.|+.+-.+|+.+...++.+...=|+.. .-. +. +...++. .+.|
T Consensus 647 PvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt--~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP 724 (1034)
T KOG0204|consen 647 PVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILT--PGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSP 724 (1034)
T ss_pred CCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHccccc--CCCccceecchhhhhcCHHHHHhhhhhheeeecCCC
Confidence 467999999999999999999999999988888888777654 111 11 1111111 1112
Q ss_pred -CHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCc--ccCCHHHHHHHHhh
Q 039449 174 -DPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAI--VLPDLVAVKEFLTS 248 (253)
Q Consensus 174 -~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~--~i~~l~el~~~l~~ 248 (253)
+...+.+.+++.| +-+.+-||+- ||-.+.++|.+..++-- .| .+..++..+. .=++++.+...+..
T Consensus 725 ~DK~lLVk~L~~~g----~VVAVTGDGT-NDaPALkeADVGlAMGI-aG---TeVAKEaSDIIi~DDNFssIVk~v~W 793 (1034)
T KOG0204|consen 725 NDKHLLVKGLIKQG----EVVAVTGDGT-NDAPALKEADVGLAMGI-AG---TEVAKEASDIIILDDNFSSIVKAVKW 793 (1034)
T ss_pred chHHHHHHHHHhcC----cEEEEecCCC-CCchhhhhcccchhccc-cc---hhhhhhhCCeEEEcCchHHHHHHHHh
Confidence 2233334444444 4566779999 99999999999887633 12 2222345663 33577777777654
|
|
| >KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.97 E-value=0.57 Score=31.42 Aligned_cols=83 Identities=12% Similarity=0.031 Sum_probs=55.1
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcch-hhhhhhhcCCCCCcceeEeeecc-------ccCccCCCHHHHHHHHHH
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRY-QDVILPALGVNQGTEWDFGVFSG-------LEGVEKPDPRIYEIALER 184 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~-~~~~l~~~gl~~~~~f~~~~~~~-------~~~~~kp~~~~~~~~~~~ 184 (253)
+..|+++...|..|+++|+.++++|++.... +...|+.+.+.. ..++.+. ..+ ...+-..|..+-+.
T Consensus 43 ~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~fkvk~----~Gvlkps~e~ft~~~~g-~gsklghfke~~n~ 117 (144)
T KOG4549|consen 43 MIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETFKVKQ----TGVLKPSLEEFTFEAVG-DGSKLGHFKEFTNN 117 (144)
T ss_pred eeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhccCc----ccccchhhhcCceeeec-CcccchhHHHHhhc
Confidence 3678999999999999999999999986644 566776665543 1111111 111 12233456666666
Q ss_pred hCCCCCCceEEEcCCcc
Q 039449 185 AGNIAPEEALHIGDSFR 201 (253)
Q Consensus 185 ~~~~~~~~~~~iGD~~~ 201 (253)
.+ +...+..++.|..+
T Consensus 118 s~-~~~k~~~~fdDesr 133 (144)
T KOG4549|consen 118 SN-SIEKNKQVFDDESR 133 (144)
T ss_pred cC-cchhceeeeccccc
Confidence 67 77778888888763
|
|
| >KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.60 E-value=0.36 Score=38.74 Aligned_cols=81 Identities=14% Similarity=0.083 Sum_probs=58.9
Q ss_pred CEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhc
Q 039449 131 LIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSV 210 (253)
Q Consensus 131 ~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~ 210 (253)
+--+++|+..-...-.++-..||...+.++.++.+...| |...|+.+.+++| - .-.-++|||.. ....+|++.
T Consensus 371 cvnVlvTttqLipalaKvLL~gLg~~fpiENIYSa~kiG----KescFerI~~RFg-~-K~~yvvIgdG~-eee~aAK~l 443 (468)
T KOG3107|consen 371 CVNVLVTTTQLIPALAKVLLYGLGSSFPIENIYSATKIG----KESCFERIQSRFG-R-KVVYVVIGDGV-EEEQAAKAL 443 (468)
T ss_pred eeEEEEeccchhHHHHHHHHHhcCCcccchhhhhhhhcc----HHHHHHHHHHHhC-C-ceEEEEecCcH-HHHHHHHhh
Confidence 344678877665544455556777633445554444444 4589999999999 4 66788999998 589999999
Q ss_pred CCeEEEEc
Q 039449 211 GMHALLVD 218 (253)
Q Consensus 211 G~~~i~~~ 218 (253)
.|++.-++
T Consensus 444 n~PfwrI~ 451 (468)
T KOG3107|consen 444 NMPFWRIS 451 (468)
T ss_pred CCceEeec
Confidence 99998887
|
|
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=92.55 E-value=0.069 Score=37.94 Aligned_cols=16 Identities=25% Similarity=0.542 Sum_probs=13.3
Q ss_pred eEEEEecCCceeccCC
Q 039449 8 RCITVDVTGTLLAYKG 23 (253)
Q Consensus 8 k~i~fD~DGTL~~~~~ 23 (253)
|+++||+||||+++..
T Consensus 1 k~LVlDLD~TLv~~~~ 16 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSS 16 (159)
T ss_dssp EEEEEE-CTTTEEEES
T ss_pred CEEEEeCCCcEEEEee
Confidence 6899999999999765
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=92.46 E-value=0.45 Score=36.32 Aligned_cols=85 Identities=24% Similarity=0.194 Sum_probs=50.0
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhh---hhhhh-cCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCC
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQD---VILPA-LGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIA 189 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~---~~l~~-~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~ 189 (253)
.++|++.+.++.++++|+++.++||+...... ..+.. +|+.- -.+.++.+... ....+++.. +
T Consensus 14 ~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~--~~~~iits~~~---------~~~~l~~~~--~ 80 (236)
T TIGR01460 14 KPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDV--SPDQIITSGSV---------TKDLLRQRF--E 80 (236)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCC--CHHHeeeHHHH---------HHHHHHHhC--C
Confidence 55789999999999999999999988754432 33444 56653 34444444322 222222222 1
Q ss_pred CCceEEEcCCcccchhhhhhcCCe
Q 039449 190 PEEALHIGDSFRKDYVPAKSVGMH 213 (253)
Q Consensus 190 ~~~~~~iGD~~~~Di~~a~~~G~~ 213 (253)
.+.++++|... ....++..|+.
T Consensus 81 ~~~v~v~G~~~--~~~~l~~~g~~ 102 (236)
T TIGR01460 81 GEKVYVIGVGE--LRESLEGLGFR 102 (236)
T ss_pred CCEEEEECCHH--HHHHHHHcCCc
Confidence 23467777532 44555565643
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.30 E-value=0.76 Score=37.81 Aligned_cols=21 Identities=19% Similarity=0.363 Sum_probs=17.7
Q ss_pred eEEEcCCcccchhhhhhcCCeE
Q 039449 193 ALHIGDSFRKDYVPAKSVGMHA 214 (253)
Q Consensus 193 ~~~iGD~~~~Di~~a~~~G~~~ 214 (253)
..-+|+.. +|+..=+.+|++.
T Consensus 497 yAGFGNri-TDvisY~~vgIp~ 517 (580)
T COG5083 497 YAGFGNRI-TDVISYSNVGIPK 517 (580)
T ss_pred hccccccc-hhheeeccccCCh
Confidence 34799999 8999999999865
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.04 E-value=0.92 Score=40.58 Aligned_cols=42 Identities=14% Similarity=0.127 Sum_probs=34.0
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCC
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVN 154 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~ 154 (253)
.++.|++.++++.|.+.+++++.+|+.+.-.+..+.+.+|+.
T Consensus 674 CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv 715 (1160)
T KOG0209|consen 674 CPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIV 715 (1160)
T ss_pred CCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeee
Confidence 367789999999999999999999999876665556555544
|
|
| >COG4850 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=91.91 E-value=1.3 Score=34.94 Aligned_cols=90 Identities=16% Similarity=0.073 Sum_probs=57.4
Q ss_pred ccCCChHHHHHHHHHcC-CEEEEEeCCCcch---hhhhhhhcCCCCCcceeEeee---ccccCcc-CCCHHHHHHHHHHh
Q 039449 114 TVFPDSQPFLRWAREKG-LIVGIISNAEYRY---QDVILPALGVNQGTEWDFGVF---SGLEGVE-KPDPRIYEIALERA 185 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g-~~~~i~s~~~~~~---~~~~l~~~gl~~~~~f~~~~~---~~~~~~~-kp~~~~~~~~~~~~ 185 (253)
.++||+..+.+.|.+.| .+++.+||++-.. ++.++..-++..+..|-.-.. ......+ .-|...+..++.++
T Consensus 196 ~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~efi~~~~~P~GPl~L~~~g~~~~~i~~sga~rK~~~l~nil~~~ 275 (373)
T COG4850 196 QVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQEFITNRNFPYGPLLLRRWGGVLDNIIESGAARKGQSLRNILRRY 275 (373)
T ss_pred CCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHHHHHHHhcCCCCCCchhHhhcCCcccccccchhhhcccHHHHHHHhC
Confidence 78899999999999987 8999999997654 334444444444333332111 1111111 22345666677776
Q ss_pred CCCCCCceEEEcCCcccchhh
Q 039449 186 GNIAPEEALHIGDSFRKDYVP 206 (253)
Q Consensus 186 ~~~~~~~~~~iGD~~~~Di~~ 206 (253)
. ....+.|||+-+.|.+.
T Consensus 276 p---~~kfvLVGDsGE~DpeI 293 (373)
T COG4850 276 P---DRKFVLVGDSGEHDPEI 293 (373)
T ss_pred C---CceEEEecCCCCcCHHH
Confidence 5 56799999998889864
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=91.80 E-value=0.28 Score=38.35 Aligned_cols=40 Identities=23% Similarity=0.338 Sum_probs=35.6
Q ss_pred CCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCC
Q 039449 116 FPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQ 155 (253)
Q Consensus 116 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~ 155 (253)
.+.+.+.|++|+++|++++++|+.....+...++.+|+..
T Consensus 23 ~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~ 62 (273)
T PRK00192 23 YEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLED 62 (273)
T ss_pred cHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC
Confidence 3567789999999999999999999999999999999875
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=91.62 E-value=0.18 Score=38.67 Aligned_cols=16 Identities=31% Similarity=0.297 Sum_probs=13.6
Q ss_pred ceEEEEecCCceeccC
Q 039449 7 LRCITVDVTGTLLAYK 22 (253)
Q Consensus 7 ~k~i~fD~DGTL~~~~ 22 (253)
-.+++||+||||.+..
T Consensus 3 ~~~l~lD~DGTL~~~~ 18 (244)
T TIGR00685 3 KRAFFFDYDGTLSEIV 18 (244)
T ss_pred cEEEEEecCccccCCc
Confidence 4689999999999853
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt | Back alignment and domain information |
|---|
Probab=91.51 E-value=5.3 Score=30.83 Aligned_cols=124 Identities=12% Similarity=0.161 Sum_probs=74.9
Q ss_pred CCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCcc----------CC-CHHHHHH
Q 039449 112 PYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVE----------KP-DPRIYEI 180 (253)
Q Consensus 112 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~----------kp-~~~~~~~ 180 (253)
.+....+..+..+.+.+.+.+-+++|.+.+.... +.. .....-.+|-.++-..+...+ -| +.+.=..
T Consensus 111 ~~~~v~~~~eA~~~l~~~~~~~iflttGsk~L~~-f~~-~~~~~~r~~~RvLp~~~~~~g~~~~~iia~~GPfs~e~n~a 188 (249)
T PF02571_consen 111 NWHYVDSYEEAAELLKELGGGRIFLTTGSKNLPP-FVP-APLPGERLFARVLPTPESALGFPPKNIIAMQGPFSKELNRA 188 (249)
T ss_pred eEEEeCCHHHHHHHHhhcCCCCEEEeCchhhHHH-Hhh-cccCCCEEEEEECCCccccCCCChhhEEEEeCCCCHHHHHH
Confidence 3566778899999998887566677777765433 222 111111244444443333211 12 3455556
Q ss_pred HHHHhCCCCCCceEEEcCCc----ccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHHHHHHhh
Q 039449 181 ALERAGNIAPEEALHIGDSF----RKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKEFLTS 248 (253)
Q Consensus 181 ~~~~~~~~~~~~~~~iGD~~----~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~~~l~~ 248 (253)
++++++ ++ +++-=||- ..=+.+|+++|++.+++.|+..+ .+...+.+++|+.+++++
T Consensus 189 l~~~~~-i~---~lVtK~SG~~g~~eKi~AA~~lgi~vivI~RP~~~-------~~~~~~~~~~e~l~~l~~ 249 (249)
T PF02571_consen 189 LFRQYG-ID---VLVTKESGGSGFDEKIEAARELGIPVIVIKRPPEP-------YGDPVVETIEELLDWLEQ 249 (249)
T ss_pred HHHHcC-CC---EEEEcCCCchhhHHHHHHHHHcCCeEEEEeCCCCC-------CCCcccCCHHHHHHHHhC
Confidence 788888 54 34333331 12388999999999999974433 133457999999998864
|
Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=91.28 E-value=0.17 Score=40.98 Aligned_cols=70 Identities=24% Similarity=0.289 Sum_probs=50.0
Q ss_pred CCHHHHHHHHHHhCCCCC---CceEEEcCCcccchhhhhhcC----CeEEEEcCCCCCChhhhhhcCCcccCCHHHHHHH
Q 039449 173 PDPRIYEIALERAGNIAP---EEALHIGDSFRKDYVPAKSVG----MHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKEF 245 (253)
Q Consensus 173 p~~~~~~~~~~~~~~~~~---~~~~~iGD~~~~Di~~a~~~G----~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~~~ 245 (253)
.|..+++.+++.++ ... .-++||||.. +|..+.+.+. -.+|.|.. . +. .....+.+++.+|+..+
T Consensus 283 dKG~Av~~LL~~l~-~~~~~~~~pvyiGDD~-TDEDaF~~L~~~~~G~gI~VG~-~-~k----~T~A~y~L~dp~eV~~f 354 (366)
T PLN03017 283 DKGKALEFLLESLG-FGNTNNVFPVYIGDDR-TDEDAFKMLRDRGEGFGILVSK-F-PK----DTDASYSLQDPSEVMDF 354 (366)
T ss_pred CHHHHHHHHHHhcc-cccCCCceEEEeCCCC-ccHHHHHHHhhcCCceEEEECC-C-CC----CCcceEeCCCHHHHHHH
Confidence 56789999999987 653 3589999999 9999988773 23455531 1 11 12345899999999999
Q ss_pred Hhhhh
Q 039449 246 LTSEI 250 (253)
Q Consensus 246 l~~~~ 250 (253)
|..+.
T Consensus 355 L~~L~ 359 (366)
T PLN03017 355 LARLV 359 (366)
T ss_pred HHHHH
Confidence 87654
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=91.04 E-value=0.36 Score=36.54 Aligned_cols=39 Identities=18% Similarity=0.196 Sum_probs=34.6
Q ss_pred CChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCC
Q 039449 117 PDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQ 155 (253)
Q Consensus 117 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~ 155 (253)
+.+.+.|++++++|++++++|+.+...+...++.+|+..
T Consensus 18 ~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 18 GPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 457899999999999999999999988888899999864
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=90.74 E-value=0.42 Score=43.77 Aligned_cols=38 Identities=13% Similarity=0.143 Sum_probs=28.1
Q ss_pred ccCCChHHHHHHHHHc-CCEEEEEeCCCcchhhhhhhhc
Q 039449 114 TVFPDSQPFLRWAREK-GLIVGIISNAEYRYQDVILPAL 151 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~~ 151 (253)
.+.|++.+.|+.|.+. +-.|+|+|+.+...++..+...
T Consensus 622 ~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~ 660 (934)
T PLN03064 622 RLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEF 660 (934)
T ss_pred CCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCC
Confidence 4456777888888764 5688999999888777766554
|
|
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=90.56 E-value=0.5 Score=37.91 Aligned_cols=86 Identities=15% Similarity=0.096 Sum_probs=57.2
Q ss_pred ccCCChHHHHHHHHHc----CCEEEEEeCCCcch----hhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHh
Q 039449 114 TVFPDSQPFLRWAREK----GLIVGIISNAEYRY----QDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERA 185 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~----g~~~~i~s~~~~~~----~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~ 185 (253)
.+.|++.++++.|+.. |+++.++||+.... ++.+.+.+|+.- ..+.++.+. ......++.+
T Consensus 16 ~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~--~~~~i~~s~---------~~~~~ll~~~ 84 (321)
T TIGR01456 16 KPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDV--SPLQVIQSH---------SPYKSLVNKY 84 (321)
T ss_pred cccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCC--CHHHHHhhh---------HHHHHHHHHc
Confidence 5578999999999998 99999999997433 333336777753 222222221 2334555544
Q ss_pred CCCCCCceEEEcCCcccchhhhhhcCCeEEE
Q 039449 186 GNIAPEEALHIGDSFRKDYVPAKSVGMHALL 216 (253)
Q Consensus 186 ~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~ 216 (253)
+ ..+++||.+- -...++.+|+..+.
T Consensus 85 ~----~~v~viG~~~--~~~~l~~~G~~~vv 109 (321)
T TIGR01456 85 E----KRILAVGTGS--VRGVAEGYGFQNVV 109 (321)
T ss_pred C----CceEEEeChH--HHHHHHHcCCcccc
Confidence 4 2689998765 47778899988764
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=90.32 E-value=0.42 Score=35.81 Aligned_cols=41 Identities=15% Similarity=0.292 Sum_probs=35.2
Q ss_pred cCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCC
Q 039449 115 VFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQ 155 (253)
Q Consensus 115 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~ 155 (253)
+.|...+.|++|+++|++++++|+.+...+...++.+++..
T Consensus 19 i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~ 59 (215)
T TIGR01487 19 ISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSG 59 (215)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCC
Confidence 34566789999999999999999999998888888888774
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.68 E-value=0.61 Score=36.27 Aligned_cols=39 Identities=26% Similarity=0.288 Sum_probs=34.0
Q ss_pred CChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCC
Q 039449 117 PDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQ 155 (253)
Q Consensus 117 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~ 155 (253)
+...+.|++++++|++++++|+++...+...++.+++..
T Consensus 23 ~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 61 (270)
T PRK10513 23 PAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQ 61 (270)
T ss_pred HHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCC
Confidence 455688999999999999999999999888889888753
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=89.46 E-value=0.56 Score=35.26 Aligned_cols=36 Identities=22% Similarity=0.350 Sum_probs=32.4
Q ss_pred hHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCC
Q 039449 119 SQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVN 154 (253)
Q Consensus 119 ~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~ 154 (253)
..+.|+.++++|++++++||++...+...++.+++.
T Consensus 21 ~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 21 AAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 457888899999999999999999999999999886
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=89.44 E-value=1.4 Score=35.73 Aligned_cols=31 Identities=13% Similarity=0.091 Sum_probs=20.5
Q ss_pred ceEEEEecCCceec----cCC-CHHHHHHHHHHHcC
Q 039449 7 LRCITVDVTGTLLA----YKG-ELGDYYCMAAKSVG 37 (253)
Q Consensus 7 ~k~i~fD~DGTL~~----~~~-~~~~~~~~~~~~~g 37 (253)
--++++|+||||.+ ... .....+..+++++.
T Consensus 98 ~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La 133 (354)
T PLN02151 98 QIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLA 133 (354)
T ss_pred ceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHh
Confidence 35899999999994 333 34455566666653
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=89.07 E-value=2.1 Score=34.85 Aligned_cols=30 Identities=17% Similarity=0.092 Sum_probs=19.8
Q ss_pred ceEEEEecCCcee---c-cCC-CHHHHHHHHHHHc
Q 039449 7 LRCITVDVTGTLL---A-YKG-ELGDYYCMAAKSV 36 (253)
Q Consensus 7 ~k~i~fD~DGTL~---~-~~~-~~~~~~~~~~~~~ 36 (253)
--+|++|+||||+ + ... .....+..+++++
T Consensus 111 ~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~L 145 (366)
T PLN03017 111 QIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKL 145 (366)
T ss_pred CeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHH
Confidence 4588999999999 3 333 3455555555555
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=89.02 E-value=0.6 Score=42.38 Aligned_cols=20 Identities=20% Similarity=0.084 Sum_probs=15.9
Q ss_pred CCcccCCHHHHHHHHhhhhh
Q 039449 232 GAIVLPDLVAVKEFLTSEIS 251 (253)
Q Consensus 232 ~~~~i~~l~el~~~l~~~~~ 251 (253)
..+.+.+..|+.++|..+.+
T Consensus 766 A~y~l~~~~eV~~lL~~l~~ 785 (797)
T PLN03063 766 ARYVLDSSNDVVSLLHKLAV 785 (797)
T ss_pred CeecCCCHHHHHHHHHHHhc
Confidence 34899999999999887553
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=88.92 E-value=0.57 Score=35.42 Aligned_cols=39 Identities=13% Similarity=0.141 Sum_probs=34.0
Q ss_pred CChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCC
Q 039449 117 PDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQ 155 (253)
Q Consensus 117 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~ 155 (253)
|...+.|++++++|++++++|+.+...+...++.+++..
T Consensus 23 ~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 61 (230)
T PRK01158 23 LKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSG 61 (230)
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC
Confidence 456688899999999999999999998888888888875
|
|
| >KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.90 E-value=0.4 Score=34.96 Aligned_cols=29 Identities=17% Similarity=0.111 Sum_probs=22.4
Q ss_pred eEEEEecCCceeccCCCHHHHHHHHHHHc
Q 039449 8 RCITVDVTGTLLAYKGELGDYYCMAAKSV 36 (253)
Q Consensus 8 k~i~fD~DGTL~~~~~~~~~~~~~~~~~~ 36 (253)
-.+.||+||||..........+...+..+
T Consensus 12 ~l~lfdvdgtLt~~r~~~~~e~~~~l~~l 40 (252)
T KOG3189|consen 12 TLCLFDVDGTLTPPRQKVTPEMLEFLQKL 40 (252)
T ss_pred eEEEEecCCccccccccCCHHHHHHHHHH
Confidence 48899999999998887666666665553
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=88.74 E-value=0.73 Score=35.74 Aligned_cols=41 Identities=27% Similarity=0.351 Sum_probs=36.8
Q ss_pred cCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCC
Q 039449 115 VFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQ 155 (253)
Q Consensus 115 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~ 155 (253)
+.+...+.|++++++|++++++|+++...+...++.+++..
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~ 61 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG 61 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc
Confidence 44567789999999999999999999999999999999985
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=88.48 E-value=0.76 Score=36.09 Aligned_cols=39 Identities=8% Similarity=0.020 Sum_probs=34.8
Q ss_pred CChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCC
Q 039449 117 PDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQ 155 (253)
Q Consensus 117 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~ 155 (253)
+.+.+.|++|+++|+++++.|+.....+..+.+.+++..
T Consensus 21 ~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 21 GAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 456788999999999999999999999999999999875
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=88.26 E-value=0.74 Score=35.50 Aligned_cols=39 Identities=31% Similarity=0.474 Sum_probs=34.2
Q ss_pred CChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCC
Q 039449 117 PDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQ 155 (253)
Q Consensus 117 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~ 155 (253)
+...+.|++++++|++++++|+++...+...++.+++..
T Consensus 19 ~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~ 57 (256)
T TIGR00099 19 PSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDT 57 (256)
T ss_pred HHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCC
Confidence 456788999999999999999999988888888888774
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=88.24 E-value=0.61 Score=36.36 Aligned_cols=39 Identities=18% Similarity=0.203 Sum_probs=34.6
Q ss_pred CChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCC
Q 039449 117 PDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQ 155 (253)
Q Consensus 117 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~ 155 (253)
+...+.|++++++|++++++|+.+...+...++.+++..
T Consensus 22 ~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 60 (272)
T PRK15126 22 EKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDA 60 (272)
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCC
Confidence 456788999999999999999999999998999998875
|
|
| >KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription] | Back alignment and domain information |
|---|
Probab=87.78 E-value=1.5 Score=38.24 Aligned_cols=88 Identities=14% Similarity=0.030 Sum_probs=59.4
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeec-cccCccCCCHHHHHHHHHHhCCCCCC
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFS-GLEGVEKPDPRIYEIALERAGNIAPE 191 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~-~~~~~~kp~~~~~~~~~~~~~~~~~~ 191 (253)
+++.|++.++|+++.+. |.+.|.|-+.+.++..+.+.+.-+ +.||...+++ ++....|.. .+...+- ...+
T Consensus 200 vKlRP~~~efL~~~skl-femhVyTmg~R~YA~~i~~liDP~-~~lF~dRIisrde~~~~kt~-----dL~~~~p-~g~s 271 (635)
T KOG0323|consen 200 VKLRPFVHEFLKEANKL-FEMHVYTMGTRDYALEIAKLIDPE-GKYFGDRIISRDESPFFKTL-----DLVLLFP-CGDS 271 (635)
T ss_pred EEeCccHHHHHHHHHhh-ceeEEEeccchHHHHHHHHHhCCC-CccccceEEEecCCCccccc-----ccccCCC-CCCc
Confidence 47789999999999988 999999999999998888877655 3466554444 443322211 1111222 3445
Q ss_pred ceEEEcCCcccchhhhhh
Q 039449 192 EALHIGDSFRKDYVPAKS 209 (253)
Q Consensus 192 ~~~~iGD~~~~Di~~a~~ 209 (253)
.++.|+|+. .-.....+
T Consensus 272 mvvIIDDr~-dVW~~~~~ 288 (635)
T KOG0323|consen 272 MVVIIDDRS-DVWPDHKR 288 (635)
T ss_pred cEEEEeCcc-ccccCCCc
Confidence 588888888 45555554
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=87.71 E-value=0.77 Score=35.63 Aligned_cols=39 Identities=13% Similarity=0.140 Sum_probs=34.2
Q ss_pred CChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCC
Q 039449 117 PDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQ 155 (253)
Q Consensus 117 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~ 155 (253)
+...+.|++++++|++++++|+.....+...++.+++..
T Consensus 22 ~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 60 (266)
T PRK10976 22 PYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKS 60 (266)
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCC
Confidence 455688999999999999999999998888888888875
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=87.69 E-value=0.88 Score=35.38 Aligned_cols=40 Identities=28% Similarity=0.305 Sum_probs=34.6
Q ss_pred CCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCC
Q 039449 116 FPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQ 155 (253)
Q Consensus 116 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~ 155 (253)
.|...+.|++++++|++++++|+.....+...++.+++..
T Consensus 22 ~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 61 (272)
T PRK10530 22 LPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALDT 61 (272)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCC
Confidence 3456788999999999999999999998888888888764
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=87.34 E-value=0.89 Score=34.20 Aligned_cols=39 Identities=13% Similarity=0.266 Sum_probs=32.7
Q ss_pred CChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCC
Q 039449 117 PDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQ 155 (253)
Q Consensus 117 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~ 155 (253)
+...+.|++++++|++++++|+.+...+..+++.+++..
T Consensus 18 ~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~ 56 (225)
T TIGR01482 18 ESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPD 56 (225)
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC
Confidence 455678888999999999999999988888888888654
|
catalyze the same reaction as SPP. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=86.89 E-value=0.56 Score=42.84 Aligned_cols=31 Identities=19% Similarity=0.207 Sum_probs=20.5
Q ss_pred CceEEEEecCCceeccCC---CHHHHHHHHHHHc
Q 039449 6 RLRCITVDVTGTLLAYKG---ELGDYYCMAAKSV 36 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~~---~~~~~~~~~~~~~ 36 (253)
+.++|++|+||||++... .....+..+++++
T Consensus 595 ~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L 628 (854)
T PLN02205 595 TTRAILLDYDGTLMPQASIDKSPSSKSIDILNTL 628 (854)
T ss_pred cCeEEEEecCCcccCCccccCCCCHHHHHHHHHH
Confidence 468999999999997652 2223444445443
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=86.77 E-value=0.98 Score=34.87 Aligned_cols=38 Identities=16% Similarity=0.167 Sum_probs=33.7
Q ss_pred ChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCC
Q 039449 118 DSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQ 155 (253)
Q Consensus 118 ~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~ 155 (253)
...+.++.++++|++++++|+.....+...++.+|+..
T Consensus 20 ~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~ 57 (256)
T TIGR01486 20 PAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLED 57 (256)
T ss_pred HHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC
Confidence 45788999999999999999999999999999998764
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=86.47 E-value=0.82 Score=35.68 Aligned_cols=38 Identities=21% Similarity=0.212 Sum_probs=33.6
Q ss_pred CChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCC
Q 039449 117 PDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVN 154 (253)
Q Consensus 117 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~ 154 (253)
+...+.|++++++|++++++|+.+...+...++.+|++
T Consensus 27 ~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 27 QPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence 34568899999999999999999999999999999885
|
|
| >COG0731 Fe-S oxidoreductases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=86.07 E-value=2.8 Score=33.03 Aligned_cols=107 Identities=14% Similarity=0.212 Sum_probs=60.0
Q ss_pred CCccCCChHHHHHHHHHcC-CEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeecccc----CccCC-CHHHHHHHHHHh
Q 039449 112 PYTVFPDSQPFLRWAREKG-LIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLE----GVEKP-DPRIYEIALERA 185 (253)
Q Consensus 112 ~~~~~~~~~~~l~~l~~~g-~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~----~~~kp-~~~~~~~~~~~~ 185 (253)
...++|...++++.+++.| ++++++||+.... +++.+...+ ....-+-+... ....| .+..++.+++.+
T Consensus 90 EPTLy~~L~elI~~~k~~g~~~tflvTNgslpd---v~~~L~~~d--ql~~sLdA~~~~~~~~InRP~~~~~~e~ile~L 164 (296)
T COG0731 90 EPTLYPNLGELIEEIKKRGKKTTFLVTNGSLPD---VLEELKLPD--QLYVSLDAPDEKTFRRINRPHKKDSWEKILEGL 164 (296)
T ss_pred CcccccCHHHHHHHHHhcCCceEEEEeCCChHH---HHHHhccCC--EEEEEeccCCHHHHHHhcCCCCcchHHHHHHHH
Confidence 3478999999999999999 7999999999844 444443332 11111111111 11245 335666666655
Q ss_pred CCCCCC-------ceEEEcCCcccch--------hhhhhcCCeEEEEcCCCCCCh
Q 039449 186 GNIAPE-------EALHIGDSFRKDY--------VPAKSVGMHALLVDRFKTPDA 225 (253)
Q Consensus 186 ~~~~~~-------~~~~iGD~~~~Di--------~~a~~~G~~~i~~~~~~~~~~ 225 (253)
...+.. ++..|. +. ||- +..+.+....|.++.+..+..
T Consensus 165 ~~~~~~~~~~~vir~tlvk-g~-N~~~e~~~~~a~ll~~~~Pd~velk~~~rpga 217 (296)
T COG0731 165 EIFRSEYKGRTVIRTTLVK-GI-NDDEEELEEYAELLERINPDFVELKTYMRPGA 217 (296)
T ss_pred HHhhhcCCCcEEEEEEEec-cc-cCChHHHHHHHHHHHhcCCCeEEEecCccCCh
Confidence 411111 344444 33 232 245566778888885544433
|
|
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=84.64 E-value=7.9 Score=36.34 Aligned_cols=70 Identities=14% Similarity=0.147 Sum_probs=47.0
Q ss_pred hhhhhhhhcCCCCCcceeEeeecc------ccCccCCCHHHHHHHHHHhCCCCCCce-EEEcCCccc-chhhhhhcCCeE
Q 039449 143 YQDVILPALGVNQGTEWDFGVFSG------LEGVEKPDPRIYEIALERAGNIAPEEA-LHIGDSFRK-DYVPAKSVGMHA 214 (253)
Q Consensus 143 ~~~~~l~~~gl~~~~~f~~~~~~~------~~~~~kp~~~~~~~~~~~~~~~~~~~~-~~iGD~~~~-Di~~a~~~G~~~ 214 (253)
.++..|+..|+.. .. +++. .......+.+++..+..++| ++.+++ +|+||+- | |++....--.++
T Consensus 925 elr~~Lr~~gLr~----~~-iys~~~~~LDVlP~~ASKgqAlRyL~~rwg-i~l~~v~VfaGdSG-ntD~e~Ll~G~~~t 997 (1050)
T TIGR02468 925 ELRKLLRIQGLRC----HA-VYCRNGTRLNVIPLLASRSQALRYLFVRWG-IELANMAVFVGESG-DTDYEGLLGGLHKT 997 (1050)
T ss_pred HHHHHHHhCCCce----EE-EeecCCcEeeeeeCCCCHHHHHHHHHHHcC-CChHHeEEEeccCC-CCCHHHHhCCceeE
Confidence 3555666666654 22 2222 22344668899999999999 999999 5599999 7 988764444455
Q ss_pred EEEcC
Q 039449 215 LLVDR 219 (253)
Q Consensus 215 i~~~~ 219 (253)
|.+.+
T Consensus 998 vi~~g 1002 (1050)
T TIGR02468 998 VILKG 1002 (1050)
T ss_pred EEEec
Confidence 65553
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=84.52 E-value=0.83 Score=34.79 Aligned_cols=39 Identities=23% Similarity=0.174 Sum_probs=27.7
Q ss_pred CCHHHHHHHHHHhCCCC---CCceEEEcCCcccchhhhhhcCCe
Q 039449 173 PDPRIYEIALERAGNIA---PEEALHIGDSFRKDYVPAKSVGMH 213 (253)
Q Consensus 173 p~~~~~~~~~~~~~~~~---~~~~~~iGD~~~~Di~~a~~~G~~ 213 (253)
.|..+++.+++.++ .. +.-++++||.. +|-.+.+.+.-.
T Consensus 165 ~KG~av~~ll~~~~-~~~~~~~~~l~~GDD~-tDE~~f~~~~~~ 206 (235)
T PF02358_consen 165 NKGSAVRRLLEELP-FAGPKPDFVLYIGDDR-TDEDAFRALREL 206 (235)
T ss_dssp -HHHHHHHHHTTS----------EEEEESSH-HHHHHHHTTTTS
T ss_pred ChHHHHHHHHHhcC-ccccccceeEEecCCC-CCHHHHHHHHhc
Confidence 36788889998887 54 67899999999 899998887553
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=83.20 E-value=2.1 Score=38.44 Aligned_cols=102 Identities=15% Similarity=0.143 Sum_probs=64.1
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCC--CcceeE----------eeecc------ccCcc--CC
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQ--GTEWDF----------GVFSG------LEGVE--KP 173 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~--~~~f~~----------~~~~~------~~~~~--kp 173 (253)
+|.+.+.+.+..+++.|++++.+|+.-...++.+.+..|+-. ..-+.. .+.+. ..|.. .-
T Consensus 590 PPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~ 669 (1019)
T KOG0203|consen 590 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDM 669 (1019)
T ss_pred CCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEeccccccc
Confidence 356678899999999999999999998877777776666322 000000 00000 01111 22
Q ss_pred CHHHHHHHHHHhCC-----CCC--------------CceEEEcCCcccchhhhhhcCCeEEE
Q 039449 174 DPRIYEIALERAGN-----IAP--------------EEALHIGDSFRKDYVPAKSVGMHALL 216 (253)
Q Consensus 174 ~~~~~~~~~~~~~~-----~~~--------------~~~~~iGD~~~~Di~~a~~~G~~~i~ 216 (253)
.++-+.+++..... -+| +=+.+.||+. ||-.+.+++.++.++
T Consensus 670 ~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGV-NDsPALKKADIGVAM 730 (1019)
T KOG0203|consen 670 SSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGV-NDSPALKKADIGVAM 730 (1019)
T ss_pred CHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCc-CCChhhcccccceee
Confidence 34555555555420 111 3466789999 999999999999887
|
|
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=82.89 E-value=0.94 Score=31.73 Aligned_cols=17 Identities=18% Similarity=0.290 Sum_probs=14.3
Q ss_pred ceEEEEecCCceeccCC
Q 039449 7 LRCITVDVTGTLLAYKG 23 (253)
Q Consensus 7 ~k~i~fD~DGTL~~~~~ 23 (253)
-+.+++|+||||+++..
T Consensus 2 k~~lvldld~tl~~~~~ 18 (148)
T smart00577 2 KKTLVLDLDETLVHSTH 18 (148)
T ss_pred CcEEEEeCCCCeECCCC
Confidence 36899999999999753
|
|
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=82.16 E-value=0.88 Score=32.47 Aligned_cols=16 Identities=19% Similarity=0.272 Sum_probs=14.0
Q ss_pred eEEEEecCCceeccCC
Q 039449 8 RCITVDVTGTLLAYKG 23 (253)
Q Consensus 8 k~i~fD~DGTL~~~~~ 23 (253)
+++++|+|+||+.+..
T Consensus 2 ~~lvlDLDeTLi~~~~ 17 (162)
T TIGR02251 2 KTLVLDLDETLVHSTF 17 (162)
T ss_pred cEEEEcCCCCcCCCCC
Confidence 5799999999999754
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 253 | ||||
| 3k1z_A | 263 | Crystal Structure Of Human Haloacid Dehalogenase-li | 4e-21 | ||
| 1x42_A | 232 | Crystal Structure Of A Haloacid Dehalogenase Family | 4e-10 | ||
| 4ffd_A | 234 | Crystal Structure Of Engineered Protein. Northeast | 7e-09 | ||
| 3u26_A | 234 | Crystal Structure Of Engineered Protein. Northeast | 2e-07 | ||
| 2hoq_A | 241 | Crystal Structure Of The Probable Haloacid Dehaloge | 2e-07 | ||
| 3d6j_A | 225 | Crystal Structure Of Putative Haloacid Dehalogenase | 6e-07 | ||
| 2om6_A | 235 | Hypothetical Protein (probable Phosphoserine Phosph | 4e-05 | ||
| 2zg6_A | 220 | Crystal Structure Of Hypothetical Protein; Probable | 3e-04 |
| >pdb|3K1Z|A Chain A, Crystal Structure Of Human Haloacid Dehalogenase-like Hydrolase Domain Containing 3 (hdhd3) Length = 263 | Back alignment and structure |
|
| >pdb|1X42|A Chain A, Crystal Structure Of A Haloacid Dehalogenase Family Protein (Ph0459) From Pyrococcus Horikoshii Ot3 Length = 232 | Back alignment and structure |
|
| >pdb|4FFD|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or48 Length = 234 | Back alignment and structure |
|
| >pdb|3U26|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or48 Length = 234 | Back alignment and structure |
|
| >pdb|2HOQ|A Chain A, Crystal Structure Of The Probable Haloacid Dehalogenase (Ph1655) From Pyrococcus Horikoshii Ot3 Length = 241 | Back alignment and structure |
|
| >pdb|3D6J|A Chain A, Crystal Structure Of Putative Haloacid Dehalogenase-Like Hydrolase From Bacteroides Fragilis Length = 225 | Back alignment and structure |
|
| >pdb|2OM6|A Chain A, Hypothetical Protein (probable Phosphoserine Phosph (ph0253) From Pyrococcus Horikoshii Ot3 Length = 235 | Back alignment and structure |
|
| >pdb|2ZG6|A Chain A, Crystal Structure Of Hypothetical Protein; Probable 2- Haloalkanoic Acid Dehalogenase From Sulfolobus Tokodaii Length = 220 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} Length = 263 | Back alignment and structure |
|---|
Score = 218 bits (557), Expect = 2e-71
Identities = 74/241 (30%), Positives = 119/241 (49%), Gaps = 7/241 (2%)
Query: 7 LRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGF 66
+R +T DV TLL + LG+ Y A++ GL + + +GF+ AY+ + ++P +G
Sbjct: 1 MRLLTWDVKDTLLRLRHPLGEAYATKARAHGLEV-EPSALEQGFRQAYRAQSHSFPNYGL 59
Query: 67 AAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWA 126
+ + + WW V +F AG D I ++Y F + V ++ LR
Sbjct: 60 SHGLTSRQWWLDVVLQTFHLAGVQ-DAQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLREC 118
Query: 127 REKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAG 186
R +GL + +ISN + R + IL LG+ + +DF + S G KPDPRI++ AL A
Sbjct: 119 RTRGLRLAVISNFDRRLEG-ILGGLGLRE--HFDFVLTSEAAGWPKPDPRIFQEALRLAH 175
Query: 187 NIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAI-VLPDLVAVKEF 245
+ P A H+GD++ DY ++VGMH+ LV + D +LP L +
Sbjct: 176 -MEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLLPA 234
Query: 246 L 246
L
Sbjct: 235 L 235
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} Length = 220 | Back alignment and structure |
|---|
Score = 155 bits (393), Expect = 3e-47
Identities = 43/224 (19%), Positives = 81/224 (36%), Gaps = 22/224 (9%)
Query: 6 RLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFG 65
+ + + VD TL+ +K + K G D ++V + A +
Sbjct: 2 KYKAVLVDFGNTLVGFKPVFYEKVYQVLKDNGYD-LDLRKVFRAYAKAMGMINYPDE--- 57
Query: 66 FAAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRW 125
+D G E +++ ++ D+ FL
Sbjct: 58 -------DGLEHVDPKDFLYILGIYPSERLVKELKEA----DIRDGEAFLYDDTLEFLEG 106
Query: 126 AREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERA 185
+ G + ++SNA R + +L + + +D S KP+P+I+ AL +
Sbjct: 107 LKSNGYKLALVSNASPRVKT-LLEKFDLKK--YFDALALSYEIKAVKPNPKIFGFALAKV 163
Query: 186 GNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWR 229
G A+H+GD + DY+ AK + +L+DR+ R
Sbjct: 164 G----YPAVHVGDIYELDYIGAKRSYVDPILLDRYDFYPDVRDR 203
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} Length = 235 | Back alignment and structure |
|---|
Score = 148 bits (374), Expect = 3e-44
Identities = 53/249 (21%), Positives = 97/249 (38%), Gaps = 23/249 (9%)
Query: 4 LSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPC 63
+ ++ +T DV TLL L ++ AK GL D + K+M
Sbjct: 1 MREVKLVTFDVWNTLLDLNIMLDEFSHQLAKISGLHIKDVANAVIEVRNEIKKMRAQAS- 59
Query: 64 FGFAAKMPNIVWWKTCVRDSF--VRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQP 121
+ + S + D + ++ R + V ++
Sbjct: 60 ----------EDPRKVLTGSQEALAGKLKVDVELVKRATARAILNV---DESLVLEGTKE 106
Query: 122 FLRWAREKGLIVGIISNAEY---RYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIY 178
L++ +E+GL +I N + Y ++L G+ + D F+ KP ++
Sbjct: 107 ALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLME--FIDKTFFADEVLSYKPRKEMF 164
Query: 179 EIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAI-VLP 237
E L + PEE+LHIGD++ +DY A+ VGM A+ +++ K + I +
Sbjct: 165 EKVLNSFE-VKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIA 223
Query: 238 DLVAVKEFL 246
+L V E +
Sbjct: 224 NLKDVIELI 232
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A Length = 238 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 1e-27
Identities = 28/154 (18%), Positives = 51/154 (33%), Gaps = 10/154 (6%)
Query: 75 WWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVG 134
T GY+ D E+ +RR + + + + +++ +
Sbjct: 69 VVNTRFSALLKEYGYEADGALLEQKYRRFLEEG-----HQLIDGAFDLISNLQQQFDL-Y 122
Query: 135 IISNAEYRYQDVILPALGVNQGTEW-DFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEA 193
I++N Q L G+ + S G +KP + ER + E
Sbjct: 123 IVTNGVSHTQYKRLRDSGLF---PFFKDIFVSEDTGFQKPMKEYFNYVFERIPQFSAEHT 179
Query: 194 LHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKE 227
L IGDS D + G+ ++ P+ E
Sbjct: 180 LIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPE 213
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} Length = 189 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 3e-27
Identities = 31/155 (20%), Positives = 57/155 (36%), Gaps = 9/155 (5%)
Query: 84 FVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRY 143
G + + ++ + +++ L ++ G I+SN
Sbjct: 7 IWDMGETLNTVPNTRYDHHPLDTY---PEVVLRKNAKETLEKVKQLGFKQAILSNTATSD 63
Query: 144 QDVILPALGVNQGTEW-DFGVFSGLE----GVEKPDPRIYEIALERAGNIAPEEALHIGD 198
+VI L ++ DF S E +EKPD I++ L I EA+ +G+
Sbjct: 64 TEVIKRVLTNFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNALQ-IDKTEAVMVGN 122
Query: 199 SFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGA 233
+F D + A G+HA+ + + E A
Sbjct: 123 TFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVA 157
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} PDB: 1x42_A Length = 234 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 4e-27
Identities = 48/216 (22%), Positives = 89/216 (41%), Gaps = 13/216 (6%)
Query: 8 RCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFA 67
R + D GTL + +G K + DY + Y+++ +
Sbjct: 3 RAVFFDSLGTLNSVEGAAKS----HLKIMEEVLGDYPLNPKTLLDEYEKLTREA---FSN 55
Query: 68 AKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAR 127
+ + + + Y E + ++P+ L+ +
Sbjct: 56 YAGKPYRPLRDILEEVMRKLAEKYGFKYPENFWEISLRMSQRYG--ELYPEVVEVLKSLK 113
Query: 128 EKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGN 187
K VG+I++++ L ALG+ +D S G KP PRI+E+AL++AG
Sbjct: 114 GK-YHVGMITDSDTEQAMAFLDALGIKD--LFDSITTSEEAGFFKPHPRIFELALKKAG- 169
Query: 188 IAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTP 223
+ EEA+++GD+ KD +K++GM ++L+DR
Sbjct: 170 VKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEK 205
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} Length = 241 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 3e-26
Identities = 51/222 (22%), Positives = 89/222 (40%), Gaps = 17/222 (7%)
Query: 42 DYKRVHE-GFKLAYKEMAKNYPCFGF-AAKMPNIVWWKTC------VRDSFV-RAGYDYD 92
D ++ E K A + M ++ F A I K D + R Y+
Sbjct: 15 DTSKLAEIARKNAIENMIRHGLPVDFETAYSELIELIKEYGSNFPYHFDYLLRRLDLPYN 74
Query: 93 EDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALG 152
+ + + P ++ L +E G +GII++ Q + L
Sbjct: 75 PKWISAGVIAYHNTKFAYL--REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLE 132
Query: 153 VNQGTEW-DFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVG 211
++ + + + S EGV+KP P+I++ AL+ + PEEAL +GD D AK VG
Sbjct: 133 LDD---FFEHVIISDFEGVKKPHPKIFKKALKAFN-VKPEEALMVGDRLYSDIYGAKRVG 188
Query: 212 MHALLVDRFKTPDAKEWRKSGA-IVLPDLVAVKEFLTSEISA 252
M + K + + + A + +L ++ E L E S+
Sbjct: 189 MKTVWFRYGKHSERELEYRKYADYEIDNLESLLEVLARESSS 230
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} Length = 240 | Back alignment and structure |
|---|
Score = 95.9 bits (239), Expect = 3e-24
Identities = 40/222 (18%), Positives = 75/222 (33%), Gaps = 19/222 (8%)
Query: 8 RCITVDVTGTLLAYKG--ELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFG 65
+ + D+ T+ A+ S + + ++ E+ Y
Sbjct: 6 KNLFFDLDDTIWAFSRNARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYG--- 62
Query: 66 FAAKMPNIVWWKTCVRDSFVRAGYDYDE--DTFEKIFRRIYASFGSSAPYTVFPDSQPFL 123
K+ + G + + + F + F I + + P ++ L
Sbjct: 63 -EGKVTKEELNRQRFFYPLQAVGVEDEALAERFSEDFFAIIPTK-----SGLMPHAKEVL 116
Query: 124 RWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEW-DFGVFSGLEGVEKPDPRIYEIAL 182
+ + + I+SN Q + + GV++ + + S GV KP P I+ AL
Sbjct: 117 EYLAPQYNL-YILSNGFRELQSRKMRSAGVDR---YFKKIILSEDLGVLKPRPEIFHFAL 172
Query: 183 ERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPD 224
E+L IGDS+ D A VGMH + +
Sbjct: 173 SATQ-SELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTV 213
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} Length = 137 | Back alignment and structure |
|---|
Score = 90.6 bits (225), Expect = 4e-23
Identities = 22/109 (20%), Positives = 41/109 (37%), Gaps = 4/109 (3%)
Query: 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKP 173
+ L A++ G+ I+SN + L N D + SG GVEKP
Sbjct: 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNG--VVDKVLLSGELGVEKP 75
Query: 174 DPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKT 222
+ ++ A + + + + + DS + A G+ + +F
Sbjct: 76 EEAAFQAAADAID-LPMRDCVLVDDSIL-NVRGAVEAGLVGVYYQQFDR 122
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A Length = 260 | Back alignment and structure |
|---|
Score = 92.2 bits (229), Expect = 1e-22
Identities = 35/215 (16%), Positives = 71/215 (33%), Gaps = 16/215 (7%)
Query: 4 LSRLRCITVDVTGTLL----AYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAK 59
LSR+R + D+ TL+ A + + + + + KE
Sbjct: 15 LSRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFH 74
Query: 60 NYPCFGFAAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDS 119
Y + ++ D + ++ S + D
Sbjct: 75 PY-------STCITDVRTSHWEEAIQETKGGADNRKLAEECYFLWKST-RLQHMILADDV 126
Query: 120 QPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYE 179
+ L R K + + +++N + + Q + A +D V G + EKP P I+
Sbjct: 127 KAMLTELR-KEVRLLLLTNGDRQTQREKIEACACQS--YFDAIVIGGEQKEEKPAPSIFY 183
Query: 180 IALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHA 214
+ G + P + + +GD+ D + G+ A
Sbjct: 184 HCCDLLG-VQPGDCVMVGDTLETDIQGGLNAGLKA 217
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} Length = 240 | Back alignment and structure |
|---|
Score = 86.4 bits (214), Expect = 2e-20
Identities = 30/169 (17%), Positives = 59/169 (34%), Gaps = 15/169 (8%)
Query: 76 WKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGI 135
+ G + D E+ + + FPD+ L++ + K + I
Sbjct: 68 LRAVYDRIAKEWGLEPDAAEREEFGTSVKN-------WPAFPDTVEALQYLK-KHYKLVI 119
Query: 136 ISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAG--NIAPEEA 193
+SN + + LGV E+D + + G KP+P + ++ I ++
Sbjct: 120 LSNIDRNEFKLSNAKLGV----EFDHIITAQDVGSYKPNPNNFTYMIDALAKAGIEKKDI 175
Query: 194 LHIGDSFRKDYVPAKSVGMHALLVDR-FKTPDAKEWRKSGAIVLPDLVA 241
LH +S D++PA G+ + + R + D
Sbjct: 176 LHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRF 224
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} Length = 200 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 3e-20
Identities = 32/188 (17%), Positives = 63/188 (33%), Gaps = 20/188 (10%)
Query: 43 YKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRR 102
V + F L + + + + + D+ + F +
Sbjct: 25 RADVAQRFGLDTDDFTERHR-LAAPELELGRMTLAEYLEQVVFYQPRDFTPEDFRAVMEE 83
Query: 103 IYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFG 162
P+ R + + ++N + + G+ +
Sbjct: 84 QS---------QPRPEVLALARDLG-QRYRMYSLNNEGRDLNEYRIRTFGLGE--FLLAF 131
Query: 163 VFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKT 222
S GV KP+P +Y + L A + PEEA+ + D + + A++VGMHA+
Sbjct: 132 FTSSALGVMKPNPAMYRLGLTLAQ-VRPEEAVMVDDRLQ-NVQAARAVGMHAVQCV---- 185
Query: 223 PDAKEWRK 230
DA + R+
Sbjct: 186 -DAAQLRE 192
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 Length = 206 | Back alignment and structure |
|---|
Score = 81.2 bits (201), Expect = 5e-19
Identities = 29/143 (20%), Positives = 53/143 (37%), Gaps = 23/143 (16%)
Query: 93 EDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALG 152
++E+ A F + + P+ + RE+G V ++SN +
Sbjct: 75 PLSYEQFSHGWQAVFVA-----LRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWP---- 125
Query: 153 VNQGTEW----DFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYV-PA 207
+ E D S G+ KP+ RIY+ L+ G +P + + D D + A
Sbjct: 126 -EEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEG-FSPSDTVFFDD--NADNIEGA 181
Query: 208 KSVGMHALLVDRFKTPDAKEWRK 230
+G+ ++LV D
Sbjct: 182 NQLGITSILVK-----DKTTIPD 199
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} Length = 234 | Back alignment and structure |
|---|
Score = 81.5 bits (201), Expect = 1e-18
Identities = 33/184 (17%), Positives = 63/184 (34%), Gaps = 15/184 (8%)
Query: 42 DYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFR 101
Y E ++ N G+ AK + + V + + D +I
Sbjct: 39 PYGTSKEISAALFQTEMNNLQILGYGAKA----FTISMVETALQISNGKIAADIIRQIVD 94
Query: 102 RIYASFGSSAPYTVFPDSQPFLRWAREKGLI-VGIISNAEYRYQDVILPALGVNQGTEWD 160
+ P + P + L+ +E G + + + + Q+ L G++
Sbjct: 95 LGKSLL--KMPIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSP----- 147
Query: 161 FGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRF 220
F +E + + Y L IAP E L +G+SF+ D P S+G + + +
Sbjct: 148 --YFDHIEVMSDKTEKEYLRLLSILQ-IAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFE 204
Query: 221 KTPD 224
Sbjct: 205 VMWK 208
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* Length = 240 | Back alignment and structure |
|---|
Score = 80.7 bits (199), Expect = 2e-18
Identities = 47/249 (18%), Positives = 90/249 (36%), Gaps = 21/249 (8%)
Query: 3 LLSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYP 62
L+ LR D GTLL D + ++ + + ++ E +
Sbjct: 10 LVDSLRACVFDAYGTLL-------DVHSAVMRNADEVGASAEALSMLWRQRQLEYSWT-- 60
Query: 63 CFGFAAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPF 122
M + ++ A Y + + + R+ +++ + +PD+
Sbjct: 61 ----RTLMHQYADFWQLTDEALTFALRTYHLEDRKGLKDRLMSAYKELSA---YPDAAET 113
Query: 123 LRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIAL 182
L + G IV I+SN L A +++ D + + + KPDPRIY+ A
Sbjct: 114 LEKLKSAGYIVAILSNGNDEMLQAALKASKLDR--VLDSCLSADDLKIYKPDPRIYQFAC 171
Query: 183 ERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAV 242
+R G + P E + + D A G + + ++R P E+ V L +
Sbjct: 172 DRLG-VNPNEVCFVSSN-AWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQV-NSLSEL 228
Query: 243 KEFLTSEIS 251
L ++
Sbjct: 229 WPLLAKNVT 237
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} Length = 251 | Back alignment and structure |
|---|
Score = 80.4 bits (198), Expect = 3e-18
Identities = 35/200 (17%), Positives = 67/200 (33%), Gaps = 17/200 (8%)
Query: 47 HEGFKLAYKEM-AKNYPCFGFAAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYA 105
+ + +N FG+ AK + +T + + R +I R
Sbjct: 50 DSRMQQHLLAVERRNLKIFGYGAKGMTLSMIETAIELTEARIEARDI-QRIVEIGRATL- 107
Query: 106 SFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFS 165
P V + + + +I+ + +Q+ + G++ +F
Sbjct: 108 ----QHPVEVIAGVREAVAAIAADYAV-VLITKGDLFHQEQKIEQSGLSD-------LFP 155
Query: 166 GLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDA 225
+E V + DP+ Y L + E + IG+S R D P ++G + + A
Sbjct: 156 RIEVVSEKDPQTYARVLSEFD-LPAERFVMIGNSLRSDVEPVLAIGGWGIYT-PYAVTWA 213
Query: 226 KEWRKSGAIVLPDLVAVKEF 245
E A P L V +
Sbjct: 214 HEQDHGVAADEPRLREVPDP 233
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A Length = 232 | Back alignment and structure |
|---|
Score = 74.5 bits (183), Expect = 3e-16
Identities = 35/175 (20%), Positives = 67/175 (38%), Gaps = 8/175 (4%)
Query: 74 VWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIV 133
V ++ D+ D + + ++ AP F + LR + +GL +
Sbjct: 58 VNFQQATEDALRFTCRHLGLDLDARTRSTLCDAYLRLAP---FSEVPDSLRELKRRGLKL 114
Query: 134 GIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEA 193
I+SN + D ++ G+ +D + V KPD R+YE+A + G +
Sbjct: 115 AILSNGSPQSIDAVVSHAGLRD--GFDHLLSVDPVQVYKPDNRVYELAEQALG-LDRSAI 171
Query: 194 LHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKEFLTS 248
L + + D A+ G ++R +E ++ + L AV E +
Sbjct: 172 LFVASN-AWDATGARYFGFPTCWINRTGNVF-EEMGQTPDWEVTSLRAVVELFET 224
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} Length = 211 | Back alignment and structure |
|---|
Score = 72.5 bits (178), Expect = 9e-16
Identities = 25/143 (17%), Positives = 48/143 (33%), Gaps = 19/143 (13%)
Query: 93 EDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALG 152
E T+++++ + + + + ++SN D+ +
Sbjct: 73 ELTYQQVYDALLGFL------EEISAEKFDYIDSLRPDYRLFLLSNTNPYVLDLAMSPRF 126
Query: 153 VNQGTEW----DFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYV-PA 207
+ G D S G KP+ I+ + +G + PEE L I D V A
Sbjct: 127 LPSGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIADSG-MKPEETLFIDD--GPANVATA 183
Query: 208 KSVGMHALLVDRFKTPDAKEWRK 230
+ +G H D + + W
Sbjct: 184 ERLGFHTYCPD-----NGENWIP 201
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A Length = 261 | Back alignment and structure |
|---|
Score = 71.4 bits (174), Expect = 6e-15
Identities = 26/141 (18%), Positives = 48/141 (34%), Gaps = 5/141 (3%)
Query: 99 IFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTE 158
++R + + F D P +R RE G+ V I S+ Q ++ E
Sbjct: 117 MWRAAFTA--GRMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILE 174
Query: 159 WDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVD 218
G F G K + Y + G + L + D ++ A+ +H +V
Sbjct: 175 LVDGHFDTKIGH-KVESESYRKIADSIG-CSTNNILFLTDV-TREASAAEEADVHVAVVV 231
Query: 219 RFKTPDAKEWRKSGAIVLPDL 239
R + K+ ++
Sbjct: 232 RPGNAGLTDDEKTYYSLITSF 252
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A Length = 229 | Back alignment and structure |
|---|
Score = 68.3 bits (167), Expect = 5e-14
Identities = 24/150 (16%), Positives = 46/150 (30%), Gaps = 22/150 (14%)
Query: 86 RAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQD 145
G + + + L REK +V ++SN +
Sbjct: 92 MMGKMVSDKQIDAAWNSFLVDI--------PTYKLDLLLKLREKY-VVYLLSNTNDIHWK 142
Query: 146 VILPALGVNQGTEW----DFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFR 201
+ + + + S + KP+P I++ E AG I P+E I D
Sbjct: 143 WVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAG-IDPKETFFIDD--S 199
Query: 202 KDYV-PAKSVGMHALLVDRFKTPDAKEWRK 230
+ A+ +G+ ++W
Sbjct: 200 EINCKVAQELGISTYTPK-----AGEDWSH 224
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} Length = 233 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 8e-14
Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 11/165 (6%)
Query: 86 RAGYDYDEDTFEKIFRRIYASFGSSAP-YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQ 144
G ++ E++ + ++ P + L ++ L I ++
Sbjct: 62 ETGMSITDEQAERLSEKHAQAYERLQHQIIALPGAVELLETLDKENLKWCIATSGGIDTA 121
Query: 145 DVILPALGVNQGTEWDFGVFSGLEGVE--KPDPRIYEIALERAGNIAPEEALHIGDSFRK 202
+ L AL ++ + + V KPDP ++ A ++ G +E L IGD+
Sbjct: 122 TINLKALKLDI----NKINIVTRDDVSYGKPDPDLFLAAAKKIG-APIDECLVIGDAIW- 175
Query: 203 DYVPAKSVGMHALLVDRFKTPDAKEWRKSGA-IVLPDLVAVKEFL 246
D + A+ + + D E ++GA V D + + L
Sbjct: 176 DMLAARRCKATGVGL-LSGGYDIGELERAGALRVYEDPLDLLNHL 219
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} Length = 231 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 5e-13
Identities = 22/157 (14%), Positives = 42/157 (26%), Gaps = 9/157 (5%)
Query: 76 WKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGI 135
+ + + ++ ++ S + + + L +E + + I
Sbjct: 66 PNSTIPKYLITLLGKRWKE-ATILYENSLEKSQKSDNFMLNDGAIELLDTLKENNITMAI 124
Query: 136 ISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVE--KPDPRIYEIALERAGNIAPEEA 193
+SN + + F G KP P AL +E
Sbjct: 125 VSNKNGERLRSEIHHKNL----THYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSKEV 180
Query: 194 LHIGDSFRKDYVPAKSVGMHALLV-DRFKTPDAKEWR 229
IGDS D A G + D ++
Sbjct: 181 FFIGDSIS-DIQSAIEAGCLPIKYGSTNIIKDILSFK 216
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A Length = 253 | Back alignment and structure |
|---|
Score = 64.2 bits (156), Expect = 2e-12
Identities = 32/160 (20%), Positives = 50/160 (31%), Gaps = 11/160 (6%)
Query: 76 WKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGI 135
+ + R++ + E + ++ PY L L I
Sbjct: 58 FWSVTREALAYTLGTLGLEPDESFLADMAQAYNRLTPYPDAAQCLAEL-----APLKRAI 112
Query: 136 ISNAEYRYQDVILPALGVNQGTEWDFGVFSGLE-GVEKPDPRIYEIALERAGNIAPEEAL 194
+SN ++ G+ +D V S V KP P Y + E G + P E L
Sbjct: 113 LSNGAPDMLQALVANAGLTD--SFDA-VISVDAKRVFKPHPDSYALVEEVLG-VTPAEVL 168
Query: 195 HIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAI 234
+ + D AK+ G V R SG I
Sbjct: 169 FVSSN-GFDVGGAKNFGFSVARVARLSQEALARELVSGTI 207
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 Length = 243 | Back alignment and structure |
|---|
Score = 62.2 bits (152), Expect = 7e-12
Identities = 33/138 (23%), Positives = 56/138 (40%), Gaps = 16/138 (11%)
Query: 87 AGYDYDEDTFEK---IFRRIYA--SFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEY 141
A + ED F+ F Y S Y P+ + L + +G I+ +++N
Sbjct: 85 AEKELTEDEFKYFKRQFGFYYGENLCNISRLY---PNVKETLEALKAQGYILAVVTNKPT 141
Query: 142 RYQDVILPALGVNQGTEWDFG-VFSGLEGVE-KPDPRIYEIALERAGNIAPEEALHIGDS 199
++ IL A G+ + F + G E KP P + + G + P++ L +GDS
Sbjct: 142 KHVQPILTAFGI----DHLFSEMLGGQSLPEIKPHPAPFYYLCGKFG-LYPKQILFVGDS 196
Query: 200 FRKDYVPAKSVGMHALLV 217
D A S G + +
Sbjct: 197 QN-DIFAAHSAGCAVVGL 213
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} Length = 225 | Back alignment and structure |
|---|
Score = 62.2 bits (152), Expect = 7e-12
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 12/143 (8%)
Query: 80 VRDSFVRAGYDYDEDTFEKI---FRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGII 136
+ +SF D D E + + + + A +FPD+ P L +++G+ +GII
Sbjct: 53 LEESFSILTGITDADQLESFRQEYSKEADIYMN-ANTILFPDTLPTLTHLKKQGIRIGII 111
Query: 137 SNAEYRYQDVILPALGVNQGTEWDFG-VFSGLEGVE-KPDPRIYEIALERAGNIAPEEAL 194
S L + F + G + KPDP +A++R PEE L
Sbjct: 112 STKYRFRILSFLRNHMP----DDWFDIIIGGEDVTHHKPDPEGLLLAIDRLK-ACPEEVL 166
Query: 195 HIGDSFRKDYVPAKSVGMHALLV 217
+IGDS D A + G+ V
Sbjct: 167 YIGDSTV-DAGTAAAAGVSFTGV 188
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} Length = 240 | Back alignment and structure |
|---|
Score = 62.2 bits (152), Expect = 8e-12
Identities = 23/143 (16%), Positives = 61/143 (42%), Gaps = 12/143 (8%)
Query: 80 VRDSFVRAGYDYDEDTFEK---IFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGII 136
+ D+F Y +++ ++ +R +A G ++ + + L + G I+ +
Sbjct: 75 LHDTFKEY-YKFEDKKAKEAVEKYREYFADKGI-FENKIYENMKEILEMLYKNGKILLVA 132
Query: 137 SNAEYRYQDVILPALGVNQGTEWDFGVFSG--LEGVEKPDPRIYEIALERAGNIAPEEAL 194
++ + + IL +++ F +G L+G + + L+ ++ +
Sbjct: 133 TSKPTVFAETILRYFDIDR----YFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVI 188
Query: 195 HIGDSFRKDYVPAKSVGMHALLV 217
+GD + D + AK +G+ ++ V
Sbjct: 189 MVGDR-KYDIIGAKKIGIDSIGV 210
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A Length = 222 | Back alignment and structure |
|---|
Score = 61.8 bits (151), Expect = 9e-12
Identities = 34/133 (25%), Positives = 49/133 (36%), Gaps = 16/133 (12%)
Query: 92 DEDTFE---KIFRRIYAS--FGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDV 146
+ E ++FR+ Y + PY P+ L + KG + ++SN
Sbjct: 59 KDKFREEYVEVFRKHYLENPVVYTKPY---PEIPYTLEALKSKGFKLAVVSNKLEELSKK 115
Query: 147 ILPALGVNQGTEWDFG-VFSGLEGVE-KPDPRIYEIALERAGNIAPEEALHIGDSFRKDY 204
IL L + F + G E KP P LE G PE+AL +GD+ D
Sbjct: 116 ILDILNL----SGYFDLIVGGDTFGEKKPSPTPVLKTLEILG-EEPEKALIVGDTDA-DI 169
Query: 205 VPAKSVGMHALLV 217
K G L
Sbjct: 170 EAGKRAGTKTALA 182
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} Length = 226 | Back alignment and structure |
|---|
Score = 60.7 bits (148), Expect = 2e-11
Identities = 27/143 (18%), Positives = 57/143 (39%), Gaps = 13/143 (9%)
Query: 80 VRDSFVRAGYDYDEDTFEK---IFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGII 136
++ SF+ Y++DE+T +R + + G V+ + L ++ G + +
Sbjct: 51 LKTSFMEY-YNFDEETATVAIDYYRDYFKAKGM-FENKVYDGIEALLSSLKDYGFHLVVA 108
Query: 137 SNAEYRYQDVILPALGVNQGTEWDFGVFSG--LEGVEKPDPRIYEIALERAGNIAPEEAL 194
++ + IL + + F G L+G + A+E I ++A+
Sbjct: 109 TSKPTVFSKQILEHFKL----AFYFDAIVGSSLDGKLSTKEDVIRYAMESLN-IKSDDAI 163
Query: 195 HIGDSFRKDYVPAKSVGMHALLV 217
IGD D + A + ++ V
Sbjct: 164 MIGDR-EYDVIGALKNNLPSIGV 185
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A Length = 243 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 4e-11
Identities = 28/166 (16%), Positives = 61/166 (36%), Gaps = 17/166 (10%)
Query: 88 GYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVI 147
G + ++ E I+ F S P + L+ + +GL +++ + Q +
Sbjct: 83 GKEATQEEIESIYHEKSILFNSYPEAERMPGAWELLQKVKSEGLTPMVVTGS---GQLSL 139
Query: 148 LPALGVNQGTEWDFGVFSGLEGVE--KPDPRIYEIALERAGNIAPEEALHIGDSFRKDYV 205
L L N + + V+ KP+P Y +AL++ G + +EA+ I ++
Sbjct: 140 LERLEHNFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGG-LKADEAVVIENA------ 192
Query: 206 P-----AKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKEFL 246
P G+ + V+ ++ P + + +
Sbjct: 193 PLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTLCDSW 238
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} Length = 247 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 6e-11
Identities = 35/219 (15%), Positives = 70/219 (31%), Gaps = 37/219 (16%)
Query: 45 RVHEGFKLAYKEMAK----------NYPCFGFAAKMPNIVWWKTCVRDSFVRAGYDYDED 94
H ++ ++ K Y G R G+D E+
Sbjct: 39 PNHA---ESWHKIMKRFGFGLSREEAYMHEG----RTGASTINIVSRRER---GHDATEE 88
Query: 95 TFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVN 154
+ I++ F P + L + +GL +++ + Q +L L N
Sbjct: 89 EIKAIYQAKTEEFNKCPKAERMPGALEVLTKIKSEGLTPMVVTGS---GQTSLLDRLNHN 145
Query: 155 QGTEWDFGVFSGLEGVE--KPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVP-----A 207
+ + V+ KP+P Y +AL++ G P EAL I ++ P
Sbjct: 146 FPGIFQANLMVTAFDVKYGKPNPEPYLMALKKGG-FKPNEALVIENA------PLGVQAG 198
Query: 208 KSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKEFL 246
+ G+ + V+ D + ++ + +
Sbjct: 199 VAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDFNKNW 237
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} Length = 240 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 1e-10
Identities = 27/160 (16%), Positives = 57/160 (35%), Gaps = 17/160 (10%)
Query: 65 GFAAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEK---IFRRIYASFGS--SAPYTVFPDS 119
A + + + + + +F+ YA + P+ P
Sbjct: 59 ALAYEAGSSRESLVAFGTKDEQIPEAVTQTEVNRVLEVFKPYYADHCQIKTGPF---PGI 115
Query: 120 QPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFG-VFSGLEGVE-KPDPRI 177
++ R+KG+ + ++SN V++ L F G+ KP P +
Sbjct: 116 LDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-----SFDFALGEKSGIRRKPAPDM 170
Query: 178 YEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLV 217
++ G + ++ ++IGDS D A++ M + V
Sbjct: 171 TSECVKVLG-VPRDKCVYIGDSEI-DIQTARNSEMDEIAV 208
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} Length = 214 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 2e-10
Identities = 31/169 (18%), Positives = 58/169 (34%), Gaps = 23/169 (13%)
Query: 86 RAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQD 145
+D T ++ + + +FPD L + +GL +G+ S++
Sbjct: 61 DEYDKWDVSTLQEEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIF 120
Query: 146 VILPALGVNQGTEWDFGVFSGLEGVE--KPDPRIYEIALERAGNIAPEEALHIGDSFRKD 203
L + F + E + KP+P IY AL++ + AL I DS
Sbjct: 121 RALEENRLQG----FFDIVLSGEEFKESKPNPEIYLTALKQLN-VQASRALIIEDSE--- 172
Query: 204 YVP----AKSVGMHALLVDRFKTPDAKEW-RKSGA-IVLPDLVAVKEFL 246
+ + + D + +S A +L L V + +
Sbjct: 173 --KGIAAGVAADVEVWAI-----RDNEFGMDQSAAKGLLDSLTDVLDLI 214
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 Length = 234 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 4e-10
Identities = 27/182 (14%), Positives = 61/182 (33%), Gaps = 13/182 (7%)
Query: 80 VRDSFVRAGYDYDE-----DTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIV- 133
+ + G + E D ++ + ++ T+ + L + ++
Sbjct: 54 IYEVLSNVGLERAEIADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLL 113
Query: 134 GIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPR-IYEIALERAG-NIAPE 191
G+++ L G++ + FG F+ P E A G N +P
Sbjct: 114 GLLTGNFEASGRHKLKLPGIDH--YFPFGAFADDALDRNELPHIALERARRMTGANYSPS 171
Query: 192 EALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGA-IVLPDLVAVKEFLTSEI 250
+ + IGD+ D A+ + ++ V +E + + + E L S +
Sbjct: 172 QIVIIGDT-EHDIRCARELDARSIAV-ATGNFTMEELARHKPGTLFKNFAETDEVLASIL 229
Query: 251 SA 252
+
Sbjct: 230 TP 231
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A Length = 267 | Back alignment and structure |
|---|
Score = 57.6 bits (139), Expect = 5e-10
Identities = 35/216 (16%), Positives = 67/216 (31%), Gaps = 18/216 (8%)
Query: 5 SRLRCITVDVTGTLLAYKGELGDYYCM--AAKSVGLPCPDYKRVHEGFKLAYKEMAKNYP 62
++ + GT + Y G G+ + + L + +
Sbjct: 4 MKIEAVIFAWAGTTVDY-GCFAPLEVFMEIFHKRGVAITA-EEARKPMGLLKIDHVRA-- 59
Query: 63 CFGFAAKMPNIV-WWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQP 121
+MP I W R A + FE+I I + + +
Sbjct: 60 ----LTEMPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYA-----SPINGVKE 110
Query: 122 FLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIA 181
+ RE+G+ +G + D++ + QG + DF V +P P +
Sbjct: 111 VIASLRERGIKIGSTTGYTREMMDIVAKEAAL-QGYKPDFLVTPDDVPAGRPYPWMCYKN 169
Query: 182 LERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLV 217
G + +GD+ D ++ GM + V
Sbjct: 170 AMELGVYPMNHMIKVGDTVS-DMKEGRNAGMWTVGV 204
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* Length = 282 | Back alignment and structure |
|---|
Score = 57.1 bits (137), Expect = 7e-10
Identities = 28/183 (15%), Positives = 60/183 (32%), Gaps = 5/183 (2%)
Query: 67 AAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWA 126
A + N + + + + + + + ++ P + LR
Sbjct: 98 AHVLNNSYYKEYGLAIRGLVMFHKVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLR-Q 156
Query: 127 REKGLIVGIISNAEYRYQDVILPALGVNQGTE--WDFGVFSGLEGVEKPDPRIYEIALER 184
K + + +NA + L LG+ + V KP + +E A++
Sbjct: 157 SGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKE 216
Query: 185 AGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGA-IVLPDLVAVK 243
+G E A I DS K+ +GM + + + IV+ D++ +
Sbjct: 217 SGLARYENAYFIDDS-GKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELP 275
Query: 244 EFL 246
+
Sbjct: 276 HVV 278
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 Length = 209 | Back alignment and structure |
|---|
Score = 55.2 bits (134), Expect = 2e-09
Identities = 29/137 (21%), Positives = 49/137 (35%), Gaps = 12/137 (8%)
Query: 84 FVRAGYDYDE-DTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYR 142
G E D F+ + + AS ++P L +GI+++
Sbjct: 54 MTELGIAASEFDHFQAQYEDVMASHYDQI--ELYPGITSLFEQLPS-ELRLGIVTSQRRN 110
Query: 143 YQDVILPALGVNQGTEWDFG-VFSGLEGVE-KPDPRIYEIALERAGNIAPEEALHIGDSF 200
+ + + S + + KPDP ALE+ +AP+ AL IGDS
Sbjct: 111 ELESGMRSYPF----MMRMAVTISADDTPKRKPDPLPLLTALEKVN-VAPQNALFIGDSV 165
Query: 201 RKDYVPAKSVGMHALLV 217
D A++ + L
Sbjct: 166 S-DEQTAQAANVDFGLA 181
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 Length = 190 | Back alignment and structure |
|---|
Score = 53.3 bits (129), Expect = 5e-09
Identities = 22/129 (17%), Positives = 42/129 (32%), Gaps = 13/129 (10%)
Query: 92 DEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPAL 151
+ + F + ++ A +F L +G ++S+ + + IL
Sbjct: 62 NLENFLEKYKENEARELEHP--ILFEGVSDLLEDISNQGGRHFLVSHRNDQVLE-ILEKT 118
Query: 152 GVNQGTEWDFG-VFSGLEGVE-KPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKS 209
+ F V + G + KP+P E+ L IGD D ++
Sbjct: 119 SIAA----YFTEVVTSSSGFKRKPNPESMLYLREKYQ---ISSGLVIGDRPI-DIEAGQA 170
Query: 210 VGMHALLVD 218
G+ L
Sbjct: 171 AGLDTHLFT 179
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 Length = 253 | Back alignment and structure |
|---|
Score = 52.5 bits (125), Expect = 2e-08
Identities = 22/110 (20%), Positives = 37/110 (33%), Gaps = 6/110 (5%)
Query: 114 TVFPDSQPFL-RWAREKGLIVGIISNAEYRYQDVILPALGVNQG---TEWDFGVFSGLEG 169
V+ D+ F+ R R G + + + V P + + G F
Sbjct: 125 PVYADAIDFIKRKKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTS 184
Query: 170 VEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDR 219
+K + + Y L G E L + D+ + A VG+ L R
Sbjct: 185 GKKTETQSYANILRDIG-AKASEVLFLSDN-PLELDAAAGVGIATGLASR 232
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* Length = 205 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 3e-08
Identities = 21/128 (16%), Positives = 41/128 (32%), Gaps = 7/128 (5%)
Query: 92 DEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPAL 151
+ + P + +R +G +GI++ V L A+
Sbjct: 50 ESAAKHAWLLEHERDLAQGSR--PAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAI 107
Query: 152 GVNQGTEWDFGVFSGLEGVE-KPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSV 210
G+ + G + KP P E ++P + +GD D ++
Sbjct: 108 GLAD--CFAEADVLGRDEAPPKPHPGGLLKLAEAWD-VSPSRMVMVGDYRF-DLDCGRAA 163
Query: 211 GMHALLVD 218
G +LV+
Sbjct: 164 GTRTVLVN 171
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 207 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 3e-08
Identities = 33/141 (23%), Positives = 55/141 (39%), Gaps = 11/141 (7%)
Query: 80 VRDSFVRAGYDYDEDT-FEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISN 138
V+D VR D + D R + + A + P ++ L WA E G+ I ++
Sbjct: 51 VQDLLVRVAEDRNLDVEVLNQVRAQSLAEKN-AQVVLMPGAREVLAWADESGIQQFIYTH 109
Query: 139 AEYRYQDVILPALGVNQGTEWDF-GVFSGLEGVE-KPDPRIYEIALERAGNIAPEEALHI 196
IL LGV E F + + G KP P L++ + + +I
Sbjct: 110 KGNNAFT-ILKDLGV----ESYFTEILTSQSGFVRKPSPEAATYLLDKYQ-LNSDNTYYI 163
Query: 197 GDSFRKDYVPAKSVGMHALLV 217
GD D A++ G+ ++
Sbjct: 164 GDR-TLDVEFAQNSGIQSINF 183
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A Length = 201 | Back alignment and structure |
|---|
Score = 51.4 bits (123), Expect = 3e-08
Identities = 31/184 (16%), Positives = 67/184 (36%), Gaps = 20/184 (10%)
Query: 75 WWKTCVRDSFVRAG----YDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFL-RWAREK 129
+ + +++ +++E T + R I G + + + L + K
Sbjct: 22 FRNKQLEYTWLLTIMGKYVEFEEIT-KITLRYILKVRGEESKFDEELNKWKNLKAYEDTK 80
Query: 130 GLI-------VGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIAL 182
L V +SN L G+ + + + KP P++Y+ L
Sbjct: 81 YLKEISEIAEVYALSNGSINEVKQHLERNGLLR--YFKGIFSAESVKEYKPSPKVYKYFL 138
Query: 183 ERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAV 242
+ G +EA + + D + AK+ GM ++ V+R T +++ D +
Sbjct: 139 DSIG---AKEAFLVSSN-AFDVIGAKNAGMRSIFVNRKNTIV-DPIGGKPDVIVNDFKEL 193
Query: 243 KEFL 246
E++
Sbjct: 194 YEWI 197
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A Length = 221 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 4e-08
Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 30/165 (18%)
Query: 86 RAGYDYDEDTFEKIFRRIYASF----GSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEY 141
A + F+++ +R ++ +P V+P L+ R + + + S +
Sbjct: 59 LADKKVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS-- 116
Query: 142 RYQDVILPALGVNQGTEWDFGVFSGLEGVE--KPDPRIYEIALERAGNIAPEEALHIGDS 199
+ +L + + F + V KP P I+ A G +AP E++ + DS
Sbjct: 117 KNGPFLLERMNLTG----YFDAIADPAEVAASKPAPDIFIAAAHAVG-VAPSESIGLEDS 171
Query: 200 FRKDYVP-----AKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDL 239
K G + V R + ++PD
Sbjct: 172 ------QAGIQAIKDSGALPIGVGRPEDLGDDIV------IVPDT 204
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 Length = 226 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 9e-08
Identities = 28/169 (16%), Positives = 65/169 (38%), Gaps = 23/169 (13%)
Query: 84 FVRAGYDYDEDTFEKIFRRIYASFGSSAPYTV--FPDSQPFLRWAREKGLIVGIISNAEY 141
A ++ + +++ R+ A S T P + + +E+GL+VG+ S +
Sbjct: 62 LWYARQPWNGPSRQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPL 121
Query: 142 RYQDVILPALGVNQGTEWDF--GVFSGLEGVE--KPDPRIYEIALERAGNIAPEEALHIG 197
+ +L + D + S + + KP P++Y + G + P + +
Sbjct: 122 HMLEKVLTMFDL-----RDSFDALASAEK-LPYSKPHPQVYLDCAAKLG-VDPLTCVALE 174
Query: 198 DSFRKDYVP----AKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAV 242
DS +K+ M +++V + + + + + L L +
Sbjct: 175 DSV-----NGMIASKAARMRSIVVPAPEAQNDPRFVLA-NVKLSSLTEL 217
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} Length = 277 | Back alignment and structure |
|---|
Score = 50.7 bits (121), Expect = 9e-08
Identities = 23/142 (16%), Positives = 37/142 (26%), Gaps = 7/142 (4%)
Query: 76 WKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGI 135
W + + D F I RI A + P + +G+ VG
Sbjct: 78 WLSIKGQASNEEDIKRLYDLFAPIQTRIVAQRS-----QLIPGWKEVFDKLIAQGIKVGG 132
Query: 136 ISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALH 195
+ L A QG VF+ +P P + +
Sbjct: 133 NTGYGPGMMAPALIAAK-EQGYTPASTVFATDVVRGRPFPDMALKVALELEVGHVNGCIK 191
Query: 196 IGDSFRKDYVPAKSVGMHALLV 217
+ D+ GM + V
Sbjct: 192 VDDTLP-GIEEGLRAGMWTVGV 212
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* Length = 555 | Back alignment and structure |
|---|
Score = 50.3 bits (120), Expect = 2e-07
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 127 REKGLIVGIISN------AEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEI 180
R+KG I++N AE ++ L +DF + S G+ KP+P+IY+
Sbjct: 113 RKKGFTTAILTNTWLDDRAERDGLAQLMCELK----MHFDFLIESCQVGMVKPEPQIYKF 168
Query: 181 ALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKT 222
L+ +P E + + D + PA+ +GM +LV T
Sbjct: 169 LLDTLK-ASPSEVVFL-DDIGANLKPARDLGMVTILVQDTDT 208
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 Length = 384 | Back alignment and structure |
|---|
Score = 49.4 bits (117), Expect = 4e-07
Identities = 30/184 (16%), Positives = 56/184 (30%), Gaps = 29/184 (15%)
Query: 91 YDEDTFEKIFRRIYASFGSSAPYTV-FPDSQPFLRWAREKGLIVGIISNAEYRYQDVILP 149
Y++ + + + + L + G +GI + Y V
Sbjct: 191 YEDVEKKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFE 250
Query: 150 ALGVNQGTEWDFGVFSG-----------LEGVEKPDPRIYEIAL-------------ERA 185
LG+ E DF + + KP+P Y AL ++
Sbjct: 251 NLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQD 310
Query: 186 GNIAPEEALHIGDSFRKDYVPAKSVGMHALLVD--RFKTPDAKEWRKSGA-IVLPDLVAV 242
+ ++ +GDS D + A+ +G + A E A V+ L +
Sbjct: 311 NIVNKDDVFIVGDS-LADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGEL 369
Query: 243 KEFL 246
+ L
Sbjct: 370 RGVL 373
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A Length = 259 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 7e-07
Identities = 33/174 (18%), Positives = 55/174 (31%), Gaps = 27/174 (15%)
Query: 86 RAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQD 145
+ + D + + R A+ + LR R G+ I SN+E
Sbjct: 85 QHDFVPPPDFLDVLETRFNAAMTGVTAI---EGAAETLRALRAAGVPFAIGSNSERGRLH 141
Query: 146 VILPALGVNQGTEWDF---GVFSGLEGVE--KPDPRIYEIALERAGNIAPEEALHIGDSF 200
+ L G+ + ++ KP P +Y A ++ G I PE + I DS
Sbjct: 142 LKLRVAGL-----TELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLG-ILPERCVVIEDS- 194
Query: 201 RKDYVP----AKSVGMHALLV---DRFKTPDAKEWRKSGA-IVLPDLVAVKEFL 246
V + G + A + GA VL ++ L
Sbjct: 195 ----VTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAELRAAL 244
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} Length = 243 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 7e-07
Identities = 30/172 (17%), Positives = 60/172 (34%), Gaps = 24/172 (13%)
Query: 90 DYDEDTFEKIFRRIYASF----GSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQD 145
D++ ++ R + V P + L R + + VG+ S +
Sbjct: 67 DFNSQERAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVS--LNAP 124
Query: 146 VILPALGVNQGTEWDFGVFSGLEGVE--KPDPRIYEIALERAGNIAPEEALHIGDSFRKD 203
IL AL + + F + ++ KPDP I+ A G + P+ + I D+
Sbjct: 125 TILAALELRE----FFTFCADASQLKNSKPDPEIFLAACAGLG-VPPQACIGIEDA---- 175
Query: 204 YVP-----AKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKEFLTSEI 250
+ GM ++ + T + ++ P L A + + +
Sbjct: 176 --QAGIDAINASGMRSVGIGAGLTGAQLLLPSTESLTWPRLSAFWQNVAENL 225
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 210 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 2e-06
Identities = 31/143 (21%), Positives = 54/143 (37%), Gaps = 18/143 (12%)
Query: 80 VRDSFVRAGYDYDEDTFEK---IFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGII 136
+ SF +D + I+R Y + G +FP L + I
Sbjct: 51 LESSFATC---LSKDQISEAVQIYRSYYKAKGI-YEAQLFPQIIDLLEELSS-SYPLYIT 105
Query: 137 SNAEYRYQDVILPALGVNQGTEWDFGVFSG--LEGVEKPDPRIYEIALERAGNIAPEEAL 194
+ + + L + F G E K D I++ AL+ +APE+A+
Sbjct: 106 TTKDTSTAQDMAKNLEI----HHFFDGIYGSSPEAPHKADV-IHQ-ALQTHQ-LAPEQAI 158
Query: 195 HIGDSFRKDYVPAKSVGMHALLV 217
IGD+ + D + A+ G+ L +
Sbjct: 159 IIGDT-KFDMLGARETGIQKLAI 180
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} Length = 275 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 3e-06
Identities = 22/167 (13%), Positives = 49/167 (29%), Gaps = 30/167 (17%)
Query: 92 DEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLI-VGIISNAEYRYQDVILPA 150
DE+ K+ I +G + P + + ++
Sbjct: 94 DEEYVNKLEGEIPEKYGEHSI--EVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDI 151
Query: 151 LGVNQGTEWDFGVFSGLEGVE--KPDPRIYEIALERAG------NIAPEEALHIGDSFRK 202
L + + F V+ KP P Y G + + + + D+
Sbjct: 152 LKIKR-----PEYFITANDVKQGKPHPEPYLKGRNGLGFPINEQDPSKSKVVVFEDA--- 203
Query: 203 DYVP-----AKSVGMHALLVDRFKTPDAKEWRKSGA-IVLPDLVAVK 243
P K+ G + + T D ++ G I++ + +++
Sbjct: 204 ---PAGIAAGKAAGCKIVGIAT--TFDLDFLKEKGCDIIVKNHESIR 245
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} Length = 233 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 5e-06
Identities = 31/162 (19%), Positives = 54/162 (33%), Gaps = 32/162 (19%)
Query: 90 DYDEDTFEKIFRRIYASF----GSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQD 145
Y +++ R + P + P L + + + +G+ S++ R
Sbjct: 64 KYTNAEKQELMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSS--RNAP 121
Query: 146 VILPALGVNQGTEWDFGVFSGLEGVE--KPDPRIYEIALERAGNIAPEEALHIGDSFRKD 203
IL L + DF + KPDP I+ A ++P + I D+
Sbjct: 122 KILRRLAIID----DFHAIVDPTTLAKGKPDPDIFLTAAAMLD-VSPADCAAIEDA---- 172
Query: 204 YVP-----AKSVGMHALLVDRFKTPDAKEWRKSGA-IVLPDL 239
KS GM A+ V + GA +V+
Sbjct: 173 --EAGISAIKSAGMFAVGV-----GQGQPM--LGADLVVRQT 205
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} Length = 196 | Back alignment and structure |
|---|
Score = 43.4 bits (102), Expect = 2e-05
Identities = 14/104 (13%), Positives = 32/104 (30%), Gaps = 8/104 (7%)
Query: 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKP 173
+ P +Q L+ R++G+ I + + D+ + + P
Sbjct: 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAAPVN-------DWMIAAPRPTAGWP 88
Query: 174 DPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLV 217
P +AL E + I + + G+ + +
Sbjct: 89 QPDACWMALMALNVSQLEGCVLISGD-PRLLQSGLNAGLWTIGL 131
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A Length = 259 | Back alignment and structure |
|---|
Score = 42.5 bits (101), Expect = 5e-05
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 172 KPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLV 217
KP+ + AL A APEEA+ IGD R D A+++GM +LV
Sbjct: 179 KPEKTFFLEALRDAD-CAPEEAVMIGDDCRDDVDGAQNIGMLGILV 223
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 9e-05
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 172 KPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLV 217
KP P ++ AL+ G + +A+ IGD D A+ GM AL V
Sbjct: 190 KPSPEFFKSALQAIG-VEAHQAVMIGDDIVGDVGGAQRCGMRALQV 234
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} Length = 250 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 2e-04
Identities = 24/167 (14%), Positives = 52/167 (31%), Gaps = 21/167 (12%)
Query: 86 RAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQD 145
++ + + +A + P ++ + R+ G+ + +++ D
Sbjct: 86 VLQLPMSKEELVEESQTKLKEVFPTAA--LMPGAEKLIIHLRKHGIPFALATSSRSASFD 143
Query: 146 VILPALGVNQGTEWDFGVFSGLEGVE----KPDPRIYEIALERAG-NIAPEEALHIGDSF 200
+ + F + E KPDP I+ +R A E+ L D+
Sbjct: 144 MKTSRH---KEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPAMEKCLVFEDA- 199
Query: 201 RKDYVP----AKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVK 243
A + GM ++V + +VL L +
Sbjct: 200 ----PNGVEAALAAGMQVVMVPDGNLSR--DLTTKATLVLNSLQDFQ 240
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 253 | |||
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 100.0 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 100.0 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 100.0 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 100.0 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 100.0 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 100.0 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 100.0 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 100.0 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 100.0 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 100.0 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 100.0 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 100.0 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 100.0 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 100.0 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 100.0 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 99.98 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 99.98 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 99.98 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 99.98 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 99.98 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 99.97 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 99.97 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 99.97 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 99.97 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 99.97 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 99.97 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 99.97 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 99.97 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 99.97 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 99.97 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 99.97 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 99.97 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 99.97 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 99.97 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 99.97 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 99.97 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 99.97 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 99.97 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 99.97 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 99.96 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 99.96 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 99.96 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.96 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 99.96 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 99.96 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 99.96 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 99.96 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 99.96 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 99.96 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 99.96 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 99.95 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 99.95 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 99.95 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 99.95 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 99.95 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 99.94 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 99.94 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 99.94 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 99.94 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 99.94 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.93 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 99.93 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 99.93 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 99.92 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 99.92 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.92 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 99.92 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 99.92 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.9 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 99.9 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 99.9 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 99.9 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.89 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 99.89 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 99.89 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 99.89 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 99.88 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 99.88 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.88 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 99.88 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 99.87 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 99.87 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 99.87 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.87 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 99.86 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.86 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 99.85 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 99.85 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.85 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 99.85 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.84 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.84 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 99.84 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.83 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.83 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 99.83 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 99.81 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.81 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.81 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.81 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 99.81 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.81 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.81 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 99.8 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.68 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.77 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.77 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.75 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 99.74 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 99.74 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.74 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 99.72 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.72 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.71 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.71 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.7 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.68 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 99.68 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.64 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 99.64 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.61 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.61 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 99.6 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.6 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.58 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.54 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 99.49 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 99.4 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 99.39 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 99.39 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 99.38 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 99.37 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.36 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 99.27 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 99.24 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 99.18 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 99.18 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 99.13 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.12 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 99.05 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.97 | |
| 2jc9_A | 555 | Cytosolic purine 5'-nucleotidase; cytosolic 5-prim | 98.96 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 98.81 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 98.74 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 98.67 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 98.57 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 98.48 | |
| 4g63_A | 470 | Cytosolic IMP-GMP specific 5'-nucleotidase; struct | 98.48 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 98.26 | |
| 3ef0_A | 372 | RNA polymerase II subunit A C-terminal domain phos | 98.24 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 98.23 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 98.12 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.02 | |
| 3qle_A | 204 | TIM50P; chaperone, mitochondrion, preprotein trans | 98.02 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 97.93 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 97.93 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 97.41 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 97.37 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 97.25 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 96.99 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 96.94 | |
| 3geb_A | 274 | EYES absent homolog 2; hydrolase, activator, alter | 96.83 | |
| 3shq_A | 320 | UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila | 96.73 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 96.68 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 96.28 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 95.9 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 95.85 | |
| 3ef1_A | 442 | RNA polymerase II subunit A C-terminal domain phos | 95.76 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 95.53 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 94.71 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 93.36 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 91.13 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 90.94 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 88.46 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 87.36 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 87.34 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 87.32 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 85.91 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 85.65 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 84.06 | |
| 2jc9_A | 555 | Cytosolic purine 5'-nucleotidase; cytosolic 5-prim | 83.93 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 83.66 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 83.02 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 82.46 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 82.26 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 82.2 | |
| 3qle_A | 204 | TIM50P; chaperone, mitochondrion, preprotein trans | 82.08 | |
| 2q5c_A | 196 | NTRC family transcriptional regulator; structural | 81.55 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 80.33 |
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-34 Score=219.03 Aligned_cols=238 Identities=31% Similarity=0.535 Sum_probs=197.3
Q ss_pred ceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHHH
Q 039449 7 LRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFVR 86 (253)
Q Consensus 7 ~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (253)
+|+|+||+||||+++...+..++..+++++|+.. ....+...+...+..+...++.++.........+|...+...+..
T Consensus 1 ik~iiFDlDGTL~d~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 79 (263)
T 3k1z_A 1 MRLLTWDVKDTLLRLRHPLGEAYATKARAHGLEV-EPSALEQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLDVVLQTFHL 79 (263)
T ss_dssp CCEEEECCBTTTEEESSCHHHHHHHHHHHTTCCC-CHHHHHHHHHHHHHHHHHHSTGGGGGGTCCHHHHHHHHHHHHHHH
T ss_pred CcEEEEcCCCceeCCCCCHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHHhhhhccccccccCCCHHHHHHHHHHHHHHH
Confidence 5899999999999999999999999999999873 455666667777777777777666656677888888888888888
Q ss_pred cCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeecc
Q 039449 87 AGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSG 166 (253)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~ 166 (253)
.+. .+.+.+.......+........+.++||+.++|+.|++.|++++++||.... +...++.+|+.. +|+.++.+.
T Consensus 80 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~--~f~~~~~~~ 155 (263)
T 3k1z_A 80 AGV-QDAQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLRE--HFDFVLTSE 155 (263)
T ss_dssp TTC-CCHHHHHHHHHHHHHHTTSGGGEEECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGG--GCSCEEEHH
T ss_pred cCC-CCHHHHHHHHHHHHHHhcCcccceECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHH--hhhEEEeec
Confidence 877 4667667777777766654344678999999999999999999999997764 688899999988 999999999
Q ss_pred ccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhh-hcCCcccCCHHHHHHH
Q 039449 167 LEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWR-KSGAIVLPDLVAVKEF 245 (253)
Q Consensus 167 ~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~-~~~~~~i~~l~el~~~ 245 (253)
..+..||+++++..+++++| +++++|++|||++.+|+.+|+++|+.++++++......+.+. ..++++++++.||.++
T Consensus 156 ~~~~~Kp~~~~~~~~~~~~g-~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~el~~~ 234 (263)
T 3k1z_A 156 AAGWPKPDPRIFQEALRLAH-MEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLLPA 234 (263)
T ss_dssp HHSSCTTSHHHHHHHHHHHT-CCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSGGGHHHH
T ss_pred ccCCCCCCHHHHHHHHHHcC-CCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCCHHHHHHH
Confidence 99999999999999999999 999999999999548999999999999999954433332222 2456899999999999
Q ss_pred Hhhhh
Q 039449 246 LTSEI 250 (253)
Q Consensus 246 l~~~~ 250 (253)
|.+..
T Consensus 235 l~~~~ 239 (263)
T 3k1z_A 235 LDCLE 239 (263)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98654
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-35 Score=218.32 Aligned_cols=216 Identities=21% Similarity=0.254 Sum_probs=167.2
Q ss_pred ceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHHH
Q 039449 7 LRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFVR 86 (253)
Q Consensus 7 ~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (253)
+|+|+||+||||+|+...+..++..+++++|.+... +.... + .|. +.... +....+.
T Consensus 1 IkAViFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~-~~~~~-~-------------~g~----~~~~~----~~~~~~~ 57 (216)
T 3kbb_A 1 MEAVIFDMDGVLMDTEPLYFEAYRRVAESYGKPYTE-DLHRR-I-------------MGV----PEREG----LPILMEA 57 (216)
T ss_dssp CCEEEEESBTTTBCCGGGHHHHHHHHHHHTTCCCCH-HHHHH-H-------------TTS----CHHHH----HHHHHHH
T ss_pred CeEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCH-HHHHH-H-------------hcc----chhhh----hhhhhhc
Confidence 689999999999999999999999999999986532 21111 0 111 11111 2333444
Q ss_pred cCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeecc
Q 039449 87 AGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSG 166 (253)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~ 166 (253)
.......+.+...+.+.+..... ....++||+.++++.|++.|++++++||+....+...++.+|+.. +|+.+++++
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~--~fd~~~~~~ 134 (216)
T 3kbb_A 58 LEIKDSLENFKKRVHEEKKRVFS-ELLKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEK--YFDVMVFGD 134 (216)
T ss_dssp TTCCSCHHHHHHHHHHHHHHHHH-HHCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG--GCSEEECGG
T ss_pred ccchhhHHHHHHHHHHHHHHHHH-HhcccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCc--ccccccccc
Confidence 44444444444433333222111 113678999999999999999999999999999999999999998 999999999
Q ss_pred ccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHHHHHH
Q 039449 167 LEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKEFL 246 (253)
Q Consensus 167 ~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~~~l 246 (253)
..+..||+|++|..+++++| ++|++|+||||++ +|+.+|+++|+++|+...++....+.+...++..+.+.+++.+.|
T Consensus 135 ~~~~~KP~p~~~~~a~~~lg-~~p~e~l~VgDs~-~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~~~~eli~~l 212 (216)
T 3kbb_A 135 QVKNGKPDPEIYLLVLERLN-VVPEKVVVFEDSK-SGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALVKPEEILNVL 212 (216)
T ss_dssp GSSSCTTSTHHHHHHHHHHT-CCGGGEEEEECSH-HHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEECGGGHHHHH
T ss_pred ccCCCcccHHHHHHHHHhhC-CCccceEEEecCH-HHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEECCHHHHHHHH
Confidence 99999999999999999999 9999999999999 899999999999997443566666777777777778899999988
Q ss_pred hhhh
Q 039449 247 TSEI 250 (253)
Q Consensus 247 ~~~~ 250 (253)
++++
T Consensus 213 ~eLL 216 (216)
T 3kbb_A 213 KEVL 216 (216)
T ss_dssp HHHC
T ss_pred HHHC
Confidence 8753
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=211.00 Aligned_cols=206 Identities=19% Similarity=0.266 Sum_probs=155.3
Q ss_pred cCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHH
Q 039449 5 SRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSF 84 (253)
Q Consensus 5 ~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (253)
|++|+|+||+||||+|+...+..++..+++++|.+......+.. ..|.. +...+
T Consensus 2 M~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~--------------~~g~~------------~~~~~ 55 (210)
T 2ah5_A 2 TSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRG--------------FMGPP------------LESSF 55 (210)
T ss_dssp TTCCEEEECSBTTTEECHHHHHHHHHHHHHHHTCCCCCHHHHHH--------------TSSSC------------HHHHH
T ss_pred CCCCEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCCHHHHHH--------------HcCcc------------HHHHH
Confidence 46899999999999999888888999999999986544332221 12221 11122
Q ss_pred HHcCCCC-ChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEee
Q 039449 85 VRAGYDY-DEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGV 163 (253)
Q Consensus 85 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~ 163 (253)
... ... ..+++...+...+..... ....++||+.++|+.|++ |++++++||+....++..++.+|+.. +|+.++
T Consensus 56 ~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~--~f~~i~ 130 (210)
T 2ah5_A 56 ATC-LSKDQISEAVQIYRSYYKAKGI-YEAQLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHH--FFDGIY 130 (210)
T ss_dssp HTT-SCGGGHHHHHHHHHHHHHHTGG-GSCEECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGG--GCSEEE
T ss_pred HHH-cCHHHHHHHHHHHHHHHHHhcc-CCCCCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchh--heeeee
Confidence 222 111 123333444443333211 124789999999999999 99999999999988888999999998 999887
Q ss_pred eccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhh-cCCcccCCHHHH
Q 039449 164 FSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRK-SGAIVLPDLVAV 242 (253)
Q Consensus 164 ~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~-~~~~~i~~l~el 242 (253)
+++ +..||+|+.|..+++++| ++|++|++|||+. +|+.+|+++|+++|++.+ +....+.+.. .++++++++.|+
T Consensus 131 ~~~--~~~Kp~p~~~~~~~~~lg-~~p~~~~~vgDs~-~Di~~a~~aG~~~i~v~~-~~~~~~~l~~~~a~~v~~~~~el 205 (210)
T 2ah5_A 131 GSS--PEAPHKADVIHQALQTHQ-LAPEQAIIIGDTK-FDMLGARETGIQKLAITW-GFGEQADLLNYQPDYIAHKPLEV 205 (210)
T ss_dssp EEC--SSCCSHHHHHHHHHHHTT-CCGGGEEEEESSH-HHHHHHHHHTCEEEEESS-SSSCHHHHHTTCCSEEESSTTHH
T ss_pred cCC--CCCCCChHHHHHHHHHcC-CCcccEEEECCCH-HHHHHHHHCCCcEEEEcC-CCCCHHHHHhCCCCEEECCHHHH
Confidence 776 778999999999999999 9999999999999 999999999999999984 4333444433 456899999999
Q ss_pred HHHH
Q 039449 243 KEFL 246 (253)
Q Consensus 243 ~~~l 246 (253)
.+++
T Consensus 206 ~~~l 209 (210)
T 2ah5_A 206 LAYF 209 (210)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 8765
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-32 Score=210.39 Aligned_cols=219 Identities=15% Similarity=0.202 Sum_probs=168.8
Q ss_pred cccCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHH
Q 039449 3 LLSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRD 82 (253)
Q Consensus 3 ~~~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (253)
+|+++|+|+||+||||+++...+..++..+++++|+.... ..... ..|. .....+...+.
T Consensus 20 ~m~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~-~~~~~--------------~~g~----~~~~~~~~~~~- 79 (243)
T 3qxg_A 20 MRKKLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLSR-EEAYM--------------HEGR----TGASTINIVFQ- 79 (243)
T ss_dssp --CCCCEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCH-HHHHH--------------TTTS----CHHHHHHHHHH-
T ss_pred ccccCCEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCCCCH-HHHHH--------------HhCC----CHHHHHHHHHH-
Confidence 4567899999999999999988889999999999887532 21111 1121 22222222222
Q ss_pred HHHHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcce--e
Q 039449 83 SFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEW--D 160 (253)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f--~ 160 (253)
..++...+.+.+...+..+...........++|++.++++.|++.|++++++||+....+...++. |+.. +| +
T Consensus 80 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~--~f~~d 154 (243)
T 3qxg_A 80 --RELGKEATQEEIESIYHEKSILFNSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPG--MFHKE 154 (243)
T ss_dssp --HHHSSCCCHHHHHHHHHHHHHHHHTSSCCCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTT--TCCGG
T ss_pred --HHhCCCCCHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHH--hcCcc
Confidence 224555566666665554443332223457899999999999999999999999999888888888 9988 89 8
Q ss_pred EeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhh-hcCCcccCCH
Q 039449 161 FGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWR-KSGAIVLPDL 239 (253)
Q Consensus 161 ~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~-~~~~~~i~~l 239 (253)
.++.+...+..||+++++..+++++| +++++|++|||+. +|+.+|+++|+.+|++.+ +....+.+. ..++++++++
T Consensus 155 ~i~~~~~~~~~kp~~~~~~~~~~~lg-~~~~~~i~vGD~~-~Di~~a~~aG~~~i~v~~-~~~~~~~l~~~~ad~v~~s~ 231 (243)
T 3qxg_A 155 LMVTAFDVKYGKPNPEPYLMALKKGG-LKADEAVVIENAP-LGVEAGHKAGIFTIAVNT-GPLDGQVLLDAGADLLFPSM 231 (243)
T ss_dssp GEECTTTCSSCTTSSHHHHHHHHHTT-CCGGGEEEEECSH-HHHHHHHHTTCEEEEECC-SSSCHHHHHHTTCSEEESCH
T ss_pred eEEeHHhCCCCCCChHHHHHHHHHcC-CCHHHeEEEeCCH-HHHHHHHHCCCEEEEEeC-CCCCHHHHHhcCCCEEECCH
Confidence 88888889999999999999999999 9999999999999 999999999999999984 444444433 3467899999
Q ss_pred HHHHHHHhhh
Q 039449 240 VAVKEFLTSE 249 (253)
Q Consensus 240 ~el~~~l~~~ 249 (253)
.||.++|++.
T Consensus 232 ~el~~~l~~l 241 (243)
T 3qxg_A 232 QTLCDSWDTI 241 (243)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999999875
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-33 Score=214.60 Aligned_cols=216 Identities=17% Similarity=0.222 Sum_probs=153.6
Q ss_pred cccCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHH
Q 039449 3 LLSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRD 82 (253)
Q Consensus 3 ~~~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (253)
|+|++|+|+||+||||+|+...+..++..+++++|++..... ... ..| .+..+. +..
T Consensus 1 M~MkiKaViFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~-~~~--------------~~g----~~~~~~----~~~ 57 (243)
T 4g9b_A 1 MVMKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQF-NES--------------LKG----ISRDES----LRR 57 (243)
T ss_dssp -CCCCCEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCTTG-GGG--------------GTT----CCHHHH----HHH
T ss_pred CCccCcEEEEcCCCcccCCHHHHHHHHHHHHHHcCCCCCHHH-HHH--------------HcC----CCHHHH----HHH
Confidence 567899999999999999988888999999999998754211 000 111 122222 333
Q ss_pred HHHHcCCCC--ChHHHHHH---HHHHHHH-hCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCC
Q 039449 83 SFVRAGYDY--DEDTFEKI---FRRIYAS-FGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQG 156 (253)
Q Consensus 83 ~~~~~~~~~--~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~ 156 (253)
.+...+... ........ ....+.. ........++||+.++++.|+++|++++++||... ....++.+|+..
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~- 134 (243)
T 4g9b_A 58 ILQHGGKEGDFNSQERAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELRE- 134 (243)
T ss_dssp HHHHTTCGGGCCHHHHHHHHHHHHHHHHHHHHTCCGGGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGG-
T ss_pred HHHHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhcc-
Confidence 344433321 11111111 1111111 11122336789999999999999999999998754 567899999998
Q ss_pred cceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhh-hcCCcc
Q 039449 157 TEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWR-KSGAIV 235 (253)
Q Consensus 157 ~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~-~~~~~~ 235 (253)
+|+.++++++.+..||+|+.|..+++++| ++|++|++|||+. +|+.+|+++|+++|+|.+ +....+.+. ...+++
T Consensus 135 -~fd~i~~~~~~~~~KP~p~~~~~a~~~lg-~~p~e~l~VgDs~-~di~aA~~aG~~~I~V~~-g~~~ad~~~~~~~~l~ 210 (243)
T 4g9b_A 135 -FFTFCADASQLKNSKPDPEIFLAACAGLG-VPPQACIGIEDAQ-AGIDAINASGMRSVGIGA-GLTGAQLLLPSTESLT 210 (243)
T ss_dssp -GCSEECCGGGCSSCTTSTHHHHHHHHHHT-SCGGGEEEEESSH-HHHHHHHHHTCEEEEEST-TCCSCSEEESSGGGCC
T ss_pred -ccccccccccccCCCCcHHHHHHHHHHcC-CChHHEEEEcCCH-HHHHHHHHcCCEEEEECC-CCCcHHHhcCChhhcC
Confidence 99999999999999999999999999999 9999999999999 899999999999999994 433322222 223466
Q ss_pred cCCHHHHHHHHhh
Q 039449 236 LPDLVAVKEFLTS 248 (253)
Q Consensus 236 i~~l~el~~~l~~ 248 (253)
++++.++.+.+.+
T Consensus 211 ~~~l~~~~~~l~~ 223 (243)
T 4g9b_A 211 WPRLSAFWQNVAE 223 (243)
T ss_dssp HHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHH
Confidence 7777777665543
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-32 Score=209.51 Aligned_cols=220 Identities=15% Similarity=0.180 Sum_probs=168.9
Q ss_pred ccCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHH
Q 039449 4 LSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDS 83 (253)
Q Consensus 4 ~~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (253)
++++|+|+||+||||+++...+..++..+++++|..... ..... ..|. .....+..++.
T Consensus 20 ~~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~-~~~~~--------------~~g~----~~~~~~~~~~~-- 78 (247)
T 3dv9_A 20 SIDLKAVLFDMDGVLFDSMPNHAESWHKIMKRFGFGLSR-EEAYM--------------HEGR----TGASTINIVSR-- 78 (247)
T ss_dssp CCCCCEEEEESBTTTBCCHHHHHHHHHHHHHHTTCCCCH-HHHHH--------------TTTS----CHHHHHHHHHH--
T ss_pred CCCCCEEEECCCCccCcCHHHHHHHHHHHHHHcCCCCCH-HHHHH--------------HhCC----ChHHHHHHHHH--
Confidence 356899999999999999988889999999999987532 21111 1121 22222222222
Q ss_pred HHHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcce--eE
Q 039449 84 FVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEW--DF 161 (253)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f--~~ 161 (253)
..++...+.+.+...+..+...........++|++.++++.|++.|++++++||+....+...++. |+.. +| +.
T Consensus 79 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~--~f~~~~ 154 (247)
T 3dv9_A 79 -RERGHDATEEEIKAIYQAKTEEFNKCPKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPG--IFQANL 154 (247)
T ss_dssp -HHHSSCCCHHHHHHHHHHHHHHHTTSCCCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTT--TCCGGG
T ss_pred -HhcCCCCCHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHH--hcCCCe
Confidence 235566666776666655544443334468899999999999999999999999999888888888 9988 89 88
Q ss_pred eeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhh-hcCCcccCCHH
Q 039449 162 GVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWR-KSGAIVLPDLV 240 (253)
Q Consensus 162 ~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~-~~~~~~i~~l~ 240 (253)
++.++..+..||+++++..+++++| +++++|++|||+. +|+.+|+++|+.++++.+ +......+. ..++++++|+.
T Consensus 155 ~~~~~~~~~~kp~~~~~~~~~~~lg-~~~~~~i~vGD~~-~Di~~a~~aG~~~i~v~~-~~~~~~~l~~~~ad~v~~~~~ 231 (247)
T 3dv9_A 155 MVTAFDVKYGKPNPEPYLMALKKGG-FKPNEALVIENAP-LGVQAGVAAGIFTIAVNT-GPLHDNVLLNEGANLLFHSMP 231 (247)
T ss_dssp EECGGGCSSCTTSSHHHHHHHHHHT-CCGGGEEEEECSH-HHHHHHHHTTSEEEEECC-SSSCHHHHHTTTCSEEESSHH
T ss_pred EEecccCCCCCCCCHHHHHHHHHcC-CChhheEEEeCCH-HHHHHHHHCCCeEEEEcC-CCCCHHHHHhcCCCEEECCHH
Confidence 8888888999999999999999999 9999999999999 999999999999999994 444444433 35679999999
Q ss_pred HHHHHHhhhhh
Q 039449 241 AVKEFLTSEIS 251 (253)
Q Consensus 241 el~~~l~~~~~ 251 (253)
||.++|.+..+
T Consensus 232 el~~~l~~~~~ 242 (247)
T 3dv9_A 232 DFNKNWETLQS 242 (247)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999987764
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-32 Score=204.42 Aligned_cols=230 Identities=17% Similarity=0.167 Sum_probs=179.1
Q ss_pred cccCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHH-HHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHH
Q 039449 3 LLSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYK-RVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVR 81 (253)
Q Consensus 3 ~~~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (253)
|||++|+|+||+||||+++...+..++..+++++|+...... .....+........ ..+.++..++....+.
T Consensus 3 ~mm~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 75 (238)
T 3ed5_A 3 AMKRYRTLLFDVDDTILDFQAAEALALRLLFEDQNIPLTNDMKAQYKTINQGLWRAF-------EEGKMTRDEVVNTRFS 75 (238)
T ss_dssp -CCCCCEEEECCBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH-------HTTSSCHHHHHHHHHH
T ss_pred ccccCCEEEEcCcCcCcCCchhHHHHHHHHHHHcCCCcchHHHHHHHHHHHHHHHHH-------HhccCCHHHHHHHHHH
Confidence 456799999999999999998888999999999998754211 11111111111111 1233456666677778
Q ss_pred HHHHHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeE
Q 039449 82 DSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDF 161 (253)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~ 161 (253)
..++..+.+.....+...+...+.. ...++|++.++|+.|++. ++++++||+....++..++.+|+.. +|+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~--~f~~ 147 (238)
T 3ed5_A 76 ALLKEYGYEADGALLEQKYRRFLEE-----GHQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFP--FFKD 147 (238)
T ss_dssp HHHHHTTCCCCHHHHHHHHHHHHTT-----CCCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGG--GCSE
T ss_pred HHHHHcCCCCcHHHHHHHHHHHHHh-----cCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHh--hhhe
Confidence 8888888887766666655554432 247899999999999999 9999999999988899999999988 9999
Q ss_pred eeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHH
Q 039449 162 GVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVA 241 (253)
Q Consensus 162 ~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~e 241 (253)
++.++..+..||++.++..+++++|.++++++++|||+..+|+.+|+.+|+++|++++ +.. .......++++++++.|
T Consensus 148 ~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~-~~~-~~~~~~~ad~v~~~~~e 225 (238)
T 3ed5_A 148 IFVSEDTGFQKPMKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNP-DMK-PNVPEIIPTYEIRKLEE 225 (238)
T ss_dssp EEEGGGTTSCTTCHHHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECT-TCC-CCTTCCCCSEEESSGGG
T ss_pred EEEecccCCCCCChHHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECC-CCC-CCcccCCCCeEECCHHH
Confidence 9999999999999999999999995379999999999964799999999999999984 322 12223456789999999
Q ss_pred HHHHHhhh
Q 039449 242 VKEFLTSE 249 (253)
Q Consensus 242 l~~~l~~~ 249 (253)
|.++|.+.
T Consensus 226 l~~~l~~~ 233 (238)
T 3ed5_A 226 LYHILNIE 233 (238)
T ss_dssp HHHHHTCC
T ss_pred HHHHHHhh
Confidence 99999764
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-32 Score=204.42 Aligned_cols=229 Identities=18% Similarity=0.214 Sum_probs=174.3
Q ss_pred cCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCC--CHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHH
Q 039449 5 SRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCP--DYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRD 82 (253)
Q Consensus 5 ~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (253)
|++|+|+||+||||+++...+..++..+++++|+... ........+......... .-..+.++...+....+..
T Consensus 3 m~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 78 (240)
T 3qnm_A 3 LKYKNLFFDLDDTIWAFSRNARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWL----EYGEGKVTKEELNRQRFFY 78 (240)
T ss_dssp CCCSEEEECCBTTTBCHHHHHHHHHHHHHHHTTGGGTSSSHHHHHHHHHHHHHHHHH----HHHTTSSCHHHHHHHHHHH
T ss_pred CCceEEEEcCCCCCcCchhhHHHHHHHHHHHcCCCcccCCHHHHHHHHHHHHHHHHH----HHhcCCCCHHHHHHHHHHH
Confidence 4689999999999999998888899999999998642 333333332221111110 0112345566666677778
Q ss_pred HHHHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEe
Q 039449 83 SFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFG 162 (253)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~ 162 (253)
.+...+.. ..+........+...... ...++|++.++++.|+ .|++++++||+....++..++.+|+.. +|+.+
T Consensus 79 ~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~--~f~~~ 152 (240)
T 3qnm_A 79 PLQAVGVE-DEALAERFSEDFFAIIPT--KSGLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDR--YFKKI 152 (240)
T ss_dssp HHHHTTCC-CHHHHHHHHHHHHHHGGG--CCCBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGG--GCSEE
T ss_pred HHHHcCCC-cHHHHHHHHHHHHHHhhh--cCCcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHh--hceeE
Confidence 88888876 333333333333333221 2578999999999999 999999999999988999999999988 99999
Q ss_pred eeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHH
Q 039449 163 VFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAV 242 (253)
Q Consensus 163 ~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el 242 (253)
+.+...+..||++++++.+++++| +++++|++|||++.+|+.+|+++|++++++++... ......++++++|+.|+
T Consensus 153 ~~~~~~~~~kp~~~~~~~~~~~lg-i~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~---~~~~~~~d~vi~sl~e~ 228 (240)
T 3qnm_A 153 ILSEDLGVLKPRPEIFHFALSATQ-SELRESLMIGDSWEADITGAHGVGMHQAFYNVTER---TVFPFQPTYHIHSLKEL 228 (240)
T ss_dssp EEGGGTTCCTTSHHHHHHHHHHTT-CCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCC---CCCSSCCSEEESSTHHH
T ss_pred EEeccCCCCCCCHHHHHHHHHHcC-CCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCC---CCcCCCCceEECCHHHH
Confidence 999999999999999999999999 99999999999943899999999999999995332 12234577999999999
Q ss_pred HHHHh
Q 039449 243 KEFLT 247 (253)
Q Consensus 243 ~~~l~ 247 (253)
..+.+
T Consensus 229 ~~~~~ 233 (240)
T 3qnm_A 229 MNLLE 233 (240)
T ss_dssp HHHTC
T ss_pred HHHHh
Confidence 98875
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-33 Score=209.16 Aligned_cols=220 Identities=18% Similarity=0.190 Sum_probs=165.8
Q ss_pred CccccCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHH
Q 039449 1 MALLSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCV 80 (253)
Q Consensus 1 m~~~~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (253)
|+ |+++|+|+||+||||+++...+..++..+++++|+.... ..+... .|. +... .+
T Consensus 1 M~-~~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~--------------~g~----~~~~----~~ 56 (233)
T 3s6j_A 1 MS-LRPQTSFIFDLDGTLTDSVYQNVAAWKEALDAENIPLAM-WRIHRK--------------IGM----SGGL----ML 56 (233)
T ss_dssp -----CCCEEEECCBTTTEECHHHHHHHHHHHHHHTTCCCCH-HHHHHH--------------TTS----CHHH----HH
T ss_pred CC-CCcCcEEEEcCCCccccChHHHHHHHHHHHHHcCCCCCH-HHHHHH--------------cCC----cHHH----HH
Confidence 55 345899999999999999888888999999999987532 222110 121 1122 23
Q ss_pred HHHHHHcCCCCChHHHHHHHHHHHHHhC-CCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcce
Q 039449 81 RDSFVRAGYDYDEDTFEKIFRRIYASFG-SSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEW 159 (253)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f 159 (253)
...+...+...+.+.+......+...+. ......++|++.++++.|++.|++++++||+....++..++.+|+.. +|
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~--~f 134 (233)
T 3s6j_A 57 KSLSRETGMSITDEQAERLSEKHAQAYERLQHQIIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDI--NK 134 (233)
T ss_dssp HHHHHC----CCHHHHHHHHHHHHHHHHHTGGGCEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCT--TS
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhccCccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhh--hh
Confidence 3444555555555554444333222211 01234789999999999999999999999999999999999999998 89
Q ss_pred eEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhc-CCcccCC
Q 039449 160 DFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKS-GAIVLPD 238 (253)
Q Consensus 160 ~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~-~~~~i~~ 238 (253)
+.++.++..+..||++.+++.++++++ ++++++++|||+. +|+.+|+++|++++++.+ +....+.+... ++++++|
T Consensus 135 ~~~~~~~~~~~~kp~~~~~~~~~~~l~-~~~~~~i~iGD~~-~Di~~a~~aG~~~i~v~~-g~~~~~~l~~~~ad~v~~~ 211 (233)
T 3s6j_A 135 INIVTRDDVSYGKPDPDLFLAAAKKIG-APIDECLVIGDAI-WDMLAARRCKATGVGLLS-GGYDIGELERAGALRVYED 211 (233)
T ss_dssp SCEECGGGSSCCTTSTHHHHHHHHHTT-CCGGGEEEEESSH-HHHHHHHHTTCEEEEEGG-GSCCHHHHHHTTCSEEESS
T ss_pred heeeccccCCCCCCChHHHHHHHHHhC-CCHHHEEEEeCCH-HhHHHHHHCCCEEEEEeC-CCCchHhHHhcCCCEEECC
Confidence 999999999999999999999999999 9999999999999 999999999999999984 43445555554 6789999
Q ss_pred HHHHHHHHhhh
Q 039449 239 LVAVKEFLTSE 249 (253)
Q Consensus 239 l~el~~~l~~~ 249 (253)
+.||.++|++.
T Consensus 212 ~~el~~~l~~~ 222 (233)
T 3s6j_A 212 PLDLLNHLDEI 222 (233)
T ss_dssp HHHHHHTGGGT
T ss_pred HHHHHHHHHHH
Confidence 99999999864
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-33 Score=212.64 Aligned_cols=217 Identities=19% Similarity=0.155 Sum_probs=168.3
Q ss_pred cCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHH
Q 039449 5 SRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSF 84 (253)
Q Consensus 5 ~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (253)
+++|+|+||+||||+++...+..++..+++++|....... .... ..|. .... .+....
T Consensus 26 ~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~-~~~~-------------~~g~----~~~~----~~~~~~ 83 (259)
T 4eek_A 26 APFDAVLFDLDGVLVESEGIIAQVWQSVLAERGLHLDLTE-IAMY-------------FTGQ----RFDG----VLAYLA 83 (259)
T ss_dssp CCCSEEEEESBTTTEECHHHHHHHHHHHHHHTTCCCCHHH-HHHH-------------TTTC----CHHH----HHHHHH
T ss_pred cCCCEEEECCCCCcccCHHHHHHHHHHHHHHhCCCCCHHH-HHHH-------------HhCC----CHHH----HHHHHH
Confidence 4689999999999999988888999999999998753222 1110 1122 2222 233445
Q ss_pred HHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeE-ee
Q 039449 85 VRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDF-GV 163 (253)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~-~~ 163 (253)
...+.....+.+......+.... ....++|++.++++.|++.|++++++||+....++..++.+|+.. +|+. ++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~--~f~~~i~ 158 (259)
T 4eek_A 84 QQHDFVPPPDFLDVLETRFNAAM---TGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTE--LAGEHIY 158 (259)
T ss_dssp HHHCCCCCTTHHHHHHHHHHHHH---TTCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHH--HHCSCEE
T ss_pred HHcCCCCCHHHHHHHHHHHHHHh---ccCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHh--hccceEE
Confidence 55666555555444444433333 235889999999999999999999999999999999999999988 8998 88
Q ss_pred eccccC-ccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCC---Chhhhh-hcCCcccCC
Q 039449 164 FSGLEG-VEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTP---DAKEWR-KSGAIVLPD 238 (253)
Q Consensus 164 ~~~~~~-~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~---~~~~~~-~~~~~~i~~ 238 (253)
.++..+ ..||++++++.++++++ +++++|++|||+. +|+.+|+++|++++++++.... ..+.+. ..+++++++
T Consensus 159 ~~~~~~~~~Kp~~~~~~~~~~~lg-i~~~~~i~iGD~~-~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~~ 236 (259)
T 4eek_A 159 DPSWVGGRGKPHPDLYTFAAQQLG-ILPERCVVIEDSV-TGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLTS 236 (259)
T ss_dssp CGGGGTTCCTTSSHHHHHHHHHTT-CCGGGEEEEESSH-HHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEECS
T ss_pred eHhhcCcCCCCChHHHHHHHHHcC-CCHHHEEEEcCCH-HHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhhCC
Confidence 888888 99999999999999999 9999999999999 9999999999999999843222 133333 336699999
Q ss_pred HHHHHHHHhhhh
Q 039449 239 LVAVKEFLTSEI 250 (253)
Q Consensus 239 l~el~~~l~~~~ 250 (253)
+.||.++|.+..
T Consensus 237 l~el~~~l~~~~ 248 (259)
T 4eek_A 237 HAELRAALAEAG 248 (259)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHhcc
Confidence 999999998654
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-32 Score=205.29 Aligned_cols=212 Identities=17% Similarity=0.131 Sum_probs=166.8
Q ss_pred cCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHH
Q 039449 5 SRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSF 84 (253)
Q Consensus 5 ~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (253)
+++|+|+||+||||+++...+..++..+++++|..... ...... .|. +..+. +....
T Consensus 3 ~m~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~--------------~g~----~~~~~----~~~~~ 59 (214)
T 3e58_A 3 AMVEAIIFDMDGVLFDTEKYYYDRRASFLGQKGISIDH-LPPSFF--------------IGG----NTKQV----WENIL 59 (214)
T ss_dssp -CCCEEEEESBTTTBCCHHHHHHHHHHHHHHTTCCCTT-SCHHHH--------------TTS----CGGGC----HHHHH
T ss_pred ccccEEEEcCCCCccccHHHHHHHHHHHHHHcCCCCCH-HHHHHH--------------cCC----CHHHH----HHHHH
Confidence 35899999999999999988889999999999885432 222110 111 11222 33344
Q ss_pred HHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeee
Q 039449 85 VRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVF 164 (253)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~ 164 (253)
...+.....+.+...+...+..........++|++.++++.|++.|++++++||+....++..++.+|+.. +|+.++.
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~--~f~~~~~ 137 (214)
T 3e58_A 60 RDEYDKWDVSTLQEEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQG--FFDIVLS 137 (214)
T ss_dssp GGGGGGSCHHHHHHHHHHHHHHSCCCHHHHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG--GCSEEEE
T ss_pred HhhcCCCCHHHHHHHHHHHHHHhhcccCCCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHh--heeeEee
Confidence 55555556667777777766655432234789999999999999999999999999999999999999998 9999999
Q ss_pred ccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHHHH
Q 039449 165 SGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKE 244 (253)
Q Consensus 165 ~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~~ 244 (253)
+...+..||+++++..++++++ +++++|++|||+. +|+.+|+++|++++++++....... ..++++++|+.||.+
T Consensus 138 ~~~~~~~kp~~~~~~~~~~~~~-~~~~~~~~iGD~~-~Di~~a~~aG~~~~~~~~~~~~~~~---~~a~~~~~~~~el~~ 212 (214)
T 3e58_A 138 GEEFKESKPNPEIYLTALKQLN-VQASRALIIEDSE-KGIAAGVAADVEVWAIRDNEFGMDQ---SAAKGLLDSLTDVLD 212 (214)
T ss_dssp GGGCSSCTTSSHHHHHHHHHHT-CCGGGEEEEECSH-HHHHHHHHTTCEEEEECCSSSCCCC---TTSSEEESSGGGGGG
T ss_pred cccccCCCCChHHHHHHHHHcC-CChHHeEEEeccH-hhHHHHHHCCCEEEEECCCCccchh---ccHHHHHHHHHHHHh
Confidence 9999999999999999999999 9999999999999 9999999999999999953333222 456789999999876
Q ss_pred HH
Q 039449 245 FL 246 (253)
Q Consensus 245 ~l 246 (253)
+|
T Consensus 213 ~i 214 (214)
T 3e58_A 213 LI 214 (214)
T ss_dssp GC
T ss_pred hC
Confidence 53
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-32 Score=205.45 Aligned_cols=213 Identities=15% Similarity=0.174 Sum_probs=163.5
Q ss_pred CceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHH
Q 039449 6 RLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFV 85 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (253)
++|+|+||+||||+++...+..++..+++++|.+......+.. ..|. +.... +...+
T Consensus 3 m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~--------------~~g~----~~~~~----~~~~~- 59 (226)
T 3mc1_A 3 LYNYVLFDLDGTLTDSAEGITKSVKYSLNKFDIQVEDLSSLNK--------------FVGP----PLKTS----FMEYY- 59 (226)
T ss_dssp CCCEEEECSBTTTBCCHHHHHHHHHHHHHTTTCCCSCGGGGGG--------------GSSS----CHHHH----HHHHH-
T ss_pred CCCEEEEeCCCccccCHHHHHHHHHHHHHHcCCCCCCHHHHHH--------------HhCc----CHHHH----HHHHh-
Confidence 4899999999999999888889999999999987654332211 1222 21111 11111
Q ss_pred HcCCCCChHHHHHHHHHHHHHhCC--CCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEee
Q 039449 86 RAGYDYDEDTFEKIFRRIYASFGS--SAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGV 163 (253)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~ 163 (253)
+. +.+........+...... .....++|++.++++.|++.|++++++||+....++..++.+|+.. +|+.++
T Consensus 60 --~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~--~f~~~~ 133 (226)
T 3mc1_A 60 --NF--DEETATVAIDYYRDYFKAKGMFENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAF--YFDAIV 133 (226)
T ss_dssp --CC--CHHHHHHHHHHHHHHHTTTGGGSCCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGG--GCSEEE
T ss_pred --CC--CHHHHHHHHHHHHHHHHHhCcccCccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHh--heeeee
Confidence 22 333333333333222221 1234789999999999999999999999999988999999999988 999999
Q ss_pred eccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhh-hhcCCcccCCHHHH
Q 039449 164 FSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEW-RKSGAIVLPDLVAV 242 (253)
Q Consensus 164 ~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~-~~~~~~~i~~l~el 242 (253)
.++..+..||+++++..+++++| +++++|++|||+. ||+.+|+++|+.+|++.+ +....+.+ ...++++++|++||
T Consensus 134 ~~~~~~~~kp~~~~~~~~~~~lg-i~~~~~i~iGD~~-~Di~~a~~aG~~~i~v~~-g~~~~~~~~~~~ad~v~~s~~el 210 (226)
T 3mc1_A 134 GSSLDGKLSTKEDVIRYAMESLN-IKSDDAIMIGDRE-YDVIGALKNNLPSIGVTY-GFGSYEELKNAGANYIVNSVDEL 210 (226)
T ss_dssp EECTTSSSCSHHHHHHHHHHHHT-CCGGGEEEEESSH-HHHHHHHTTTCCEEEESS-SSSCHHHHHHHTCSEEESSHHHH
T ss_pred ccCCCCCCCCCHHHHHHHHHHhC-cCcccEEEECCCH-HHHHHHHHCCCCEEEEcc-CCCCHHHHHHcCCCEEECCHHHH
Confidence 99999999999999999999999 9999999999999 999999999999999994 44444444 45567999999999
Q ss_pred HHHHhhhh
Q 039449 243 KEFLTSEI 250 (253)
Q Consensus 243 ~~~l~~~~ 250 (253)
.+++.+..
T Consensus 211 ~~~~~~~~ 218 (226)
T 3mc1_A 211 HKKILELR 218 (226)
T ss_dssp HHHHHTC-
T ss_pred HHHHHHHh
Confidence 99997643
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-32 Score=207.83 Aligned_cols=218 Identities=15% Similarity=0.160 Sum_probs=162.4
Q ss_pred ccCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHH
Q 039449 4 LSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDS 83 (253)
Q Consensus 4 ~~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (253)
.+++|+|+||+||||+++...+..++..+++++| .......+... .|. +..+. +...
T Consensus 16 ~~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g-~~~~~~~~~~~--------------~g~----~~~~~----~~~~ 72 (237)
T 4ex6_A 16 AAADRGVILDLDGTLADTPAAIATITAEVLAAMG-TAVSRGAILST--------------VGR----PLPAS----LAGL 72 (237)
T ss_dssp -CCCEEEEECSBTTTBCCHHHHHHHHHHHHHHTT-CCCCHHHHHHH--------------TTS----CHHHH----HHHH
T ss_pred cccCCEEEEcCCCCCcCCHHHHHHHHHHHHHHcC-CCCCHHHHHHh--------------cCc----cHHHH----HHHH
Confidence 4679999999999999999888899999999999 43343332221 111 11111 2222
Q ss_pred HHHcCCCCChHHHHHHHHHHHHHhCC-CCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEe
Q 039449 84 FVRAGYDYDEDTFEKIFRRIYASFGS-SAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFG 162 (253)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~ 162 (253)
+...........+...+...+..... .....++|++.++|+.|++.|++++++||+....++..++.+|+.. +|+.+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~--~f~~~ 150 (237)
T 4ex6_A 73 LGVPVEDPRVAEATEEYGRRFGAHVRAAGPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDT--RLTVI 150 (237)
T ss_dssp HTSCTTSHHHHHHHHHHHHHHHHHHHHHGGGGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGG--TCSEE
T ss_pred hCCCCCHHHHHHHHHHHHHHHHHhcccccCCccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchh--heeeE
Confidence 22111111112222233332222211 0124789999999999999999999999999999999999999988 99999
Q ss_pred eeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhh-cCCcccCCHHH
Q 039449 163 VFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRK-SGAIVLPDLVA 241 (253)
Q Consensus 163 ~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~-~~~~~i~~l~e 241 (253)
+.++..+..||++++++.+++++| +++++|++|||+. +|+.+|+.+|+.+|++.+ +....+.+.. .++++++++.|
T Consensus 151 ~~~~~~~~~kp~~~~~~~~~~~lg-~~~~~~i~vGD~~-~Di~~a~~aG~~~i~v~~-g~~~~~~~~~~~ad~v~~~~~e 227 (237)
T 4ex6_A 151 AGDDSVERGKPHPDMALHVARGLG-IPPERCVVIGDGV-PDAEMGRAAGMTVIGVSY-GVSGPDELMRAGADTVVDSFPA 227 (237)
T ss_dssp ECTTTSSSCTTSSHHHHHHHHHHT-CCGGGEEEEESSH-HHHHHHHHTTCEEEEESS-SSSCHHHHHHTTCSEEESSHHH
T ss_pred EeCCCCCCCCCCHHHHHHHHHHcC-CCHHHeEEEcCCH-HHHHHHHHCCCeEEEEec-CCCCHHHHHhcCCCEEECCHHH
Confidence 999999999999999999999999 9999999999999 999999999999999994 4444444444 56799999999
Q ss_pred HHHHHhhh
Q 039449 242 VKEFLTSE 249 (253)
Q Consensus 242 l~~~l~~~ 249 (253)
|.++|++.
T Consensus 228 l~~~l~~~ 235 (237)
T 4ex6_A 228 AVTAVLDG 235 (237)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHcc
Confidence 99998763
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-31 Score=203.54 Aligned_cols=218 Identities=18% Similarity=0.254 Sum_probs=157.6
Q ss_pred CceEEEEecCCceeccCCCHHHHHHHHHHHcCCC-CCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHH---
Q 039449 6 RLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLP-CPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVR--- 81 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 81 (253)
++|+|+||+||||+|+...+..++..+++++|.+ .......... .|. +....+...+.
T Consensus 3 ~~k~viFDlDGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--------------~g~----~~~~~~~~~~~~~~ 64 (240)
T 2hi0_A 3 KYKAAIFDMDGTILDTSADLTSALNYAFEQTGHRHDFTVEDIKNF--------------FGS----GVVVAVTRALAYEA 64 (240)
T ss_dssp SCSEEEECSBTTTEECHHHHHHHHHHHHHHTTSCCCCCHHHHHHH--------------CSS----CHHHHHHHHHHHHT
T ss_pred cccEEEEecCCCCccCHHHHHHHHHHHHHHcCCCCCCCHHHHHHh--------------cCc----cHHHHHHHHHHhcc
Confidence 4899999999999999998999999999999986 4443333221 111 11111111110
Q ss_pred ----HHHHHc-------CCCCChHHHH---HHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhh
Q 039449 82 ----DSFVRA-------GYDYDEDTFE---KIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVI 147 (253)
Q Consensus 82 ----~~~~~~-------~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~ 147 (253)
..+.+. +...+.+... ..+...+.... .....++||+.++|+.|+++|++++++||+....++..
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~ 143 (240)
T 2hi0_A 65 GSSRESLVAFGTKDEQIPEAVTQTEVNRVLEVFKPYYADHC-QIKTGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVL 143 (240)
T ss_dssp TCCHHHHTTTTSTTCCCCTTCCHHHHHHHHHHHHHHHHHTS-SSSCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHH
T ss_pred cccccccccccccccccCCCCCHHHHHHHHHHHHHHHHHhh-hhcCCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHH
Confidence 000000 1111223222 33333333322 22357899999999999999999999999998888889
Q ss_pred hhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhh
Q 039449 148 LPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKE 227 (253)
Q Consensus 148 l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~ 227 (253)
++.+|+. +|+.+++++..+..||+|+++..+++++| +++++|++|||+. +|+.+|+++|+.+|++.+ +....+.
T Consensus 144 l~~~~l~---~f~~~~~~~~~~~~Kp~p~~~~~~~~~l~-~~~~~~~~vGDs~-~Di~~a~~aG~~~v~v~~-~~~~~~~ 217 (240)
T 2hi0_A 144 VEELFPG---SFDFALGEKSGIRRKPAPDMTSECVKVLG-VPRDKCVYIGDSE-IDIQTARNSEMDEIAVNW-GFRSVPF 217 (240)
T ss_dssp HHHHSTT---TCSEEEEECTTSCCTTSSHHHHHHHHHHT-CCGGGEEEEESSH-HHHHHHHHTTCEEEEESS-SSSCHHH
T ss_pred HHHcCCc---ceeEEEecCCCCCCCCCHHHHHHHHHHcC-CCHHHeEEEcCCH-HHHHHHHHCCCeEEEECC-CCCchhH
Confidence 9999874 67888888888889999999999999999 9999999999999 999999999999999984 4333333
Q ss_pred hhh-cCCcccCCHHHHHHHHhh
Q 039449 228 WRK-SGAIVLPDLVAVKEFLTS 248 (253)
Q Consensus 228 ~~~-~~~~~i~~l~el~~~l~~ 248 (253)
+.. .++++++++.|+..++..
T Consensus 218 ~~~~~a~~~~~~~~el~~~l~~ 239 (240)
T 2hi0_A 218 LQKHGATVIVDTAEKLEEAILG 239 (240)
T ss_dssp HHHTTCCCEECSHHHHHHHHHT
T ss_pred HHhcCCCEEECCHHHHHHHhcc
Confidence 333 466899999999888753
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=99.98 E-value=6e-31 Score=199.12 Aligned_cols=231 Identities=18% Similarity=0.215 Sum_probs=162.6
Q ss_pred ccCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHH
Q 039449 4 LSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDS 83 (253)
Q Consensus 4 ~~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (253)
|+++|+|+||+||||+++...+ ..+.+.+.................+........ .+..............+...
T Consensus 1 M~~~k~i~FDlDGTL~d~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 75 (233)
T 3umb_A 1 MTSIRAVVFDAYGTLFDVYSVA----ARAEQLFPGKGEALSVLWRDRQIDYTRIRSLAG-PSGEHYKPFWDVTVDALRYA 75 (233)
T ss_dssp -CCCCEEEECSBTTTEETHHHH----HHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHC-TTSTTCCCHHHHHHHHHHHH
T ss_pred CCCceEEEEeCCCcccccHHHH----HHHHHHhccchhhhhHHHHhhhhHHHHHHHhcc-cccCCCCCHHHHHHHHHHHH
Confidence 3468999999999999975432 233333322111111111111111111111100 00011123344445556677
Q ss_pred HHHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEee
Q 039449 84 FVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGV 163 (253)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~ 163 (253)
+...+.+.+.+........+ . ...++|++.++++.|++.|++++++||+....+...++.+|+.. +|+.++
T Consensus 76 ~~~~g~~~~~~~~~~~~~~~-~------~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~--~f~~~~ 146 (233)
T 3umb_A 76 CARLNLPLGNHAEATLMREY-A------CLSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSG--LFDHVL 146 (233)
T ss_dssp HHHTTCCCCHHHHHHHHHHH-H------SCEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTT--TCSEEE
T ss_pred HHHcCCCCCHHHHHHHHHHH-h------cCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHh--hcCEEE
Confidence 78888876666554444333 2 14789999999999999999999999999999999999999998 999999
Q ss_pred eccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHHH
Q 039449 164 FSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVK 243 (253)
Q Consensus 164 ~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~ 243 (253)
.+...+..||+++++..++++++ +++++|++|||+. +|+.+|+++|++++++++.+. ..+.+...++++++|+.||.
T Consensus 147 ~~~~~~~~kp~~~~~~~~~~~~~-~~~~~~~~vGD~~-~Di~~a~~~G~~~~~v~~~~~-~~~~~~~~~~~v~~~~~el~ 223 (233)
T 3umb_A 147 SVDAVRLYKTAPAAYALAPRAFG-VPAAQILFVSSNG-WDACGATWHGFTTFWINRLGH-PPEALDVAPAAAGHDMRDLL 223 (233)
T ss_dssp EGGGTTCCTTSHHHHTHHHHHHT-SCGGGEEEEESCH-HHHHHHHHHTCEEEEECTTCC-CCCSSSCCCSEEESSHHHHH
T ss_pred EecccCCCCcCHHHHHHHHHHhC-CCcccEEEEeCCH-HHHHHHHHcCCEEEEEcCCCC-CchhccCCCCEEECCHHHHH
Confidence 99999999999999999999999 9999999999998 999999999999999995333 33444455779999999999
Q ss_pred HHHhhhhh
Q 039449 244 EFLTSEIS 251 (253)
Q Consensus 244 ~~l~~~~~ 251 (253)
++|.+..+
T Consensus 224 ~~l~~~~~ 231 (233)
T 3umb_A 224 QFVQARQS 231 (233)
T ss_dssp HHHHC---
T ss_pred HHHHHhhc
Confidence 99987543
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.98 E-value=1e-31 Score=205.63 Aligned_cols=210 Identities=15% Similarity=0.236 Sum_probs=151.0
Q ss_pred cCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHH
Q 039449 5 SRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSF 84 (253)
Q Consensus 5 ~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (253)
.|+|+|+||+||||+|+...+..++..+++++|++..... ... ..| .+..+. +...+
T Consensus 24 ~MIKaViFDlDGTLvDs~~~~~~a~~~~~~~~g~~~~~~~-~~~--------------~~g----~~~~~~----~~~~~ 80 (250)
T 4gib_A 24 AMIEAFIFDLDGVITDTAYYHYMAWRKLAHKVGIDIDTKF-NES--------------LKG----ISRMES----LDRIL 80 (250)
T ss_dssp CCCCEEEECTBTTTBCCHHHHHHHHHHHHHTTTCCCCTTG-GGG--------------TTT----CCHHHH----HHHHH
T ss_pred chhheeeecCCCcccCCHHHHHHHHHHHHHHcCCCCCHHH-HHH--------------HhC----cchHHH----HHHhh
Confidence 3589999999999999988888999999999998754211 000 011 122222 22222
Q ss_pred HHcCCC--CChHH---HHHHHHHHHHHhC-CCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcc
Q 039449 85 VRAGYD--YDEDT---FEKIFRRIYASFG-SSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTE 158 (253)
Q Consensus 85 ~~~~~~--~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~ 158 (253)
+..... ..... +......++.... ......++|++.++++.|++.|+++++.|+.. .+...++.+|+.. +
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~--~ 156 (250)
T 4gib_A 81 EFGNKKYSFSEEEKVRMAEEKNNYYVSLIDEITSNDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISD--K 156 (250)
T ss_dssp HHTTCTTTSCHHHHHHHHHHHHHHHHHHHTTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGG--G
T ss_pred hhhcCCCCCCHHHHHHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHhcccccccccccc--hhhhHhhhccccc--c
Confidence 222221 12221 1122222332222 12334689999999999999999988766553 4667899999998 9
Q ss_pred eeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCC
Q 039449 159 WDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPD 238 (253)
Q Consensus 159 f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~ 238 (253)
|+.++++++.+..||+|+.|..+++++| ++|++|+||||++ +|+.+|+++|+++|++.+.. .+ ..++++++|
T Consensus 157 Fd~i~~~~~~~~~KP~p~~~~~a~~~lg-~~p~e~l~VGDs~-~Di~aA~~aG~~~i~v~~~~-----~~-~~ad~vi~~ 228 (250)
T 4gib_A 157 FDFIADAGKCKNNKPHPEIFLMSAKGLN-VNPQNCIGIEDAS-AGIDAINSANMFSVGVGNYE-----NL-KKANLVVDS 228 (250)
T ss_dssp CSEECCGGGCCSCTTSSHHHHHHHHHHT-CCGGGEEEEESSH-HHHHHHHHTTCEEEEESCTT-----TT-TTSSEEESS
T ss_pred cceeecccccCCCCCcHHHHHHHHHHhC-CChHHeEEECCCH-HHHHHHHHcCCEEEEECChh-----Hh-ccCCEEECC
Confidence 9999999999999999999999999999 9999999999999 89999999999999997422 11 235689999
Q ss_pred HHHH-HHHHhhh
Q 039449 239 LVAV-KEFLTSE 249 (253)
Q Consensus 239 l~el-~~~l~~~ 249 (253)
+.|| .+.|.+.
T Consensus 229 l~eL~~~~i~~~ 240 (250)
T 4gib_A 229 TNQLKFEYIQEK 240 (250)
T ss_dssp GGGCCHHHHHHH
T ss_pred hHhCCHHHHHHH
Confidence 9998 5666554
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=99.98 E-value=5.8e-31 Score=198.76 Aligned_cols=223 Identities=17% Similarity=0.171 Sum_probs=162.1
Q ss_pred ccCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHH---HHHHHhhCCCCCCCCCCChHHHHHHHH
Q 039449 4 LSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLA---YKEMAKNYPCFGFAAKMPNIVWWKTCV 80 (253)
Q Consensus 4 ~~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (253)
|+++|+|+||+||||+++...+..+ .+.++... ..+...+... +....... + ............+
T Consensus 2 M~~~k~i~fDlDGTL~d~~~~~~~~----~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~ 69 (230)
T 3um9_A 2 MHAIKAVVFDLYGTLYDVYSVRTSC----ERIFPGQG---EMVSKMWRQKQLEYTWMRTLM---G--QYQDFESATLDAL 69 (230)
T ss_dssp CSSCCEEEECSBTTTBCGGGGHHHH----HHHSTTCH---HHHHHHHHHHHHHHHHHHHHH---T--CCCCHHHHHHHHH
T ss_pred CCCceEEEEcCCCCcCcchHHHHHH----HHHhcccH---HHHHHHHHHHHHHHHHHHHhh---c--cccCHHHHHHHHH
Confidence 4568999999999999987654433 33333211 1111111111 11111100 1 1123334445556
Q ss_pred HHHHHHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCccee
Q 039449 81 RDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWD 160 (253)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~ 160 (253)
...++..+...+.+........+ ....++|++.++++.|++.|++++++||+....++..++.+|+.. +|+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~--~f~ 140 (230)
T 3um9_A 70 RYTCGSLGLALDADGEAHLCSEY-------LSLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTN--SFD 140 (230)
T ss_dssp HHHHHHHTCCCCHHHHHHHHHHT-------TSCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGG--GCS
T ss_pred HHHHHHcCCCCCHHHHHHHHHHH-------hcCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChh--hcc
Confidence 66777888776655443333322 235789999999999999999999999999998999999999988 999
Q ss_pred EeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHH
Q 039449 161 FGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLV 240 (253)
Q Consensus 161 ~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~ 240 (253)
.++.+...+..||++.++..+++.++ ++++++++|||+. +|+.+|+++|++++++++.+ ...+.+...++++++|+.
T Consensus 141 ~~~~~~~~~~~kp~~~~~~~~~~~~~-~~~~~~~~iGD~~-~Di~~a~~aG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 217 (230)
T 3um9_A 141 HLISVDEVRLFKPHQKVYELAMDTLH-LGESEILFVSCNS-WDATGAKYFGYPVCWINRSN-GVFDQLGVVPDIVVSDVG 217 (230)
T ss_dssp EEEEGGGTTCCTTCHHHHHHHHHHHT-CCGGGEEEEESCH-HHHHHHHHHTCCEEEECTTS-CCCCCSSCCCSEEESSHH
T ss_pred eeEehhhcccCCCChHHHHHHHHHhC-CCcccEEEEeCCH-HHHHHHHHCCCEEEEEeCCC-CccccccCCCcEEeCCHH
Confidence 99999999999999999999999999 9999999999999 99999999999999999543 333334456679999999
Q ss_pred HHHHHHhhhh
Q 039449 241 AVKEFLTSEI 250 (253)
Q Consensus 241 el~~~l~~~~ 250 (253)
||.++|.+..
T Consensus 218 el~~~l~~~~ 227 (230)
T 3um9_A 218 VLASRFSPVD 227 (230)
T ss_dssp HHHHTCCC--
T ss_pred HHHHHHHHhh
Confidence 9999987654
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=6e-32 Score=206.93 Aligned_cols=215 Identities=13% Similarity=0.139 Sum_probs=168.3
Q ss_pred ccCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHH
Q 039449 4 LSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDS 83 (253)
Q Consensus 4 ~~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (253)
++++|+|+||+||||+++...+..++..+++++|+... ...... ..|. +... .+...
T Consensus 27 ~~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~-~~~~~~--------------~~g~----~~~~----~~~~~ 83 (250)
T 3l5k_A 27 PQPVTHLIFDMDGLLLDTERLYSVVFQEICNRYDKKYS-WDVKSL--------------VMGK----KALE----AAQII 83 (250)
T ss_dssp CCCCSEEEEETBTTTBCHHHHHHHHHHHHHHHTTCCCC-HHHHHH--------------HTTC----CHHH----HHHHH
T ss_pred ccCCcEEEEcCCCCcCCCHHHHHHHHHHHHHHhCCCCC-HHHHHH--------------hcCC----CHHH----HHHHH
Confidence 45689999999999999988888999999999998643 222211 0121 2222 24445
Q ss_pred HHHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhh-cCCCCCcceeEe
Q 039449 84 FVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPA-LGVNQGTEWDFG 162 (253)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~gl~~~~~f~~~ 162 (253)
+...+...+.+.+...+...+..... ...++|++.++|+.|++.|++++++||+....+...+.. .|+.. +|+.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~--~f~~~ 159 (250)
T 3l5k_A 84 IDVLQLPMSKEELVEESQTKLKEVFP--TAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFS--LFSHI 159 (250)
T ss_dssp HHHHTCSSCHHHHHHHHHHHHHHHGG--GCCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHT--TSSCE
T ss_pred HHHhCCCCCHHHHHHHHHHHHHHHhc--cCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHh--heeeE
Confidence 66667776777777777666655442 257899999999999999999999999998777766644 68887 89988
Q ss_pred eecc--ccCccCCCHHHHHHHHHHhCCCCC--CceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCC
Q 039449 163 VFSG--LEGVEKPDPRIYEIALERAGNIAP--EEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPD 238 (253)
Q Consensus 163 ~~~~--~~~~~kp~~~~~~~~~~~~~~~~~--~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~ 238 (253)
+.++ ..+..||+++++..+++++| +++ ++|++|||+. +|+.+|+++|+.++++.+ +... ......++++++|
T Consensus 160 ~~~~~~~~~~~Kp~~~~~~~~~~~lg-i~~~~~~~i~iGD~~-~Di~~a~~aG~~~i~v~~-~~~~-~~~~~~ad~v~~s 235 (250)
T 3l5k_A 160 VLGDDPEVQHGKPDPDIFLACAKRFS-PPPAMEKCLVFEDAP-NGVEAALAAGMQVVMVPD-GNLS-RDLTTKATLVLNS 235 (250)
T ss_dssp ECTTCTTCCSCTTSTHHHHHHHHTSS-SCCCGGGEEEEESSH-HHHHHHHHTTCEEEECCC-TTSC-GGGSTTSSEECSC
T ss_pred EecchhhccCCCCChHHHHHHHHHcC-CCCCcceEEEEeCCH-HHHHHHHHcCCEEEEEcC-CCCc-hhhcccccEeecC
Confidence 8888 78889999999999999999 988 9999999999 999999999999999994 3322 2345567799999
Q ss_pred HHHHHHHHhhh
Q 039449 239 LVAVKEFLTSE 249 (253)
Q Consensus 239 l~el~~~l~~~ 249 (253)
+.||.+.+...
T Consensus 236 l~el~~~l~~l 246 (250)
T 3l5k_A 236 LQDFQPELFGL 246 (250)
T ss_dssp GGGCCGGGGTC
T ss_pred HHHhhHHHhcC
Confidence 99998776543
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=99.98 E-value=9.2e-32 Score=202.37 Aligned_cols=210 Identities=21% Similarity=0.236 Sum_probs=160.2
Q ss_pred CceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHH
Q 039449 6 RLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFV 85 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (253)
++|+|+||+||||+++...+..++..+++++|.+....+.+.. ..|. +..+. +...+.
T Consensus 2 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~--------------~~g~----~~~~~----~~~~~~ 59 (222)
T 2nyv_A 2 SLRVILFDLDGTLIDSAKDIALALEKTLKELGLEEYYPDNVTK--------------YIGG----GVRAL----LEKVLK 59 (222)
T ss_dssp EECEEEECTBTTTEECHHHHHHHHHHHHHHTTCGGGCCSCGGG--------------GCSS----CHHHH----HHHHHG
T ss_pred CCCEEEECCCCcCCCCHHHHHHHHHHHHHHcCCCCCCHHHHHH--------------HhCc----CHHHH----HHHHhC
Confidence 4799999999999999988888899999999876222111110 1221 22222 222222
Q ss_pred HcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeec
Q 039449 86 RAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFS 165 (253)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~ 165 (253)
....+++...+...+.... .....++||+.++|+.|++.|++++++||+....++..++.+|+.. +|+.++.+
T Consensus 60 ----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~--~f~~i~~~ 132 (222)
T 2nyv_A 60 ----DKFREEYVEVFRKHYLENP-VVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSG--YFDLIVGG 132 (222)
T ss_dssp ----GGCCTHHHHHHHHHHHHCS-CSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG--GCSEEECT
T ss_pred ----hHHHHHHHHHHHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHH--HheEEEec
Confidence 1123444445555554432 2345889999999999999999999999999988999999999988 89998888
Q ss_pred cccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHHHHH
Q 039449 166 GLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKEF 245 (253)
Q Consensus 166 ~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~~~ 245 (253)
.+.+..||+++.+..++++++ +++++|++|||+. +|+.+|+++|+.++++.+ +...... ..++++++++.++.++
T Consensus 133 ~~~~~~Kp~~~~~~~~~~~~~-~~~~~~~~vGD~~-~Di~~a~~aG~~~i~v~~-g~~~~~~--~~~~~~~~~~~el~~~ 207 (222)
T 2nyv_A 133 DTFGEKKPSPTPVLKTLEILG-EEPEKALIVGDTD-ADIEAGKRAGTKTALALW-GYVKLNS--QIPDFTLSRPSDLVKL 207 (222)
T ss_dssp TSSCTTCCTTHHHHHHHHHHT-CCGGGEEEEESSH-HHHHHHHHHTCEEEEETT-SSCSCCC--CCCSEEESSTTHHHHH
T ss_pred CcCCCCCCChHHHHHHHHHhC-CCchhEEEECCCH-HHHHHHHHCCCeEEEEcC-CCCCccc--cCCCEEECCHHHHHHH
Confidence 888889999999999999999 9999999999998 999999999999999984 3222222 3466899999999998
Q ss_pred Hhhh
Q 039449 246 LTSE 249 (253)
Q Consensus 246 l~~~ 249 (253)
+.+.
T Consensus 208 l~~~ 211 (222)
T 2nyv_A 208 MDNH 211 (222)
T ss_dssp HHTT
T ss_pred HHHh
Confidence 8754
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=197.50 Aligned_cols=206 Identities=16% Similarity=0.162 Sum_probs=160.7
Q ss_pred ccCceEEEEecCCceeccCCCHHHHH-HHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHH
Q 039449 4 LSRLRCITVDVTGTLLAYKGELGDYY-CMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRD 82 (253)
Q Consensus 4 ~~~~k~i~fD~DGTL~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (253)
|+++|+|+||+||||+++...+..++ ..+++++|.+...... ..+ .+.... +..
T Consensus 22 m~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~~~~~-----------------~~g----~~~~~~----~~~ 76 (231)
T 3kzx_A 22 MKQPTAVIFDWYNTLIDTSINIDRTTFYQVLDQMGYKNIDLDS-----------------IPN----STIPKY----LIT 76 (231)
T ss_dssp CCCCSEEEECTBTTTEETTSSCCHHHHHHHHHHTTCCCCCCTT-----------------SCT----TTHHHH----HHH
T ss_pred cCCCCEEEECCCCCCcCCchhHHHHHHHHHHHHcCCCHHHHHH-----------------HhC----ccHHHH----HHH
Confidence 55689999999999999998888888 9999999877532110 111 122222 222
Q ss_pred HHHHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEe
Q 039449 83 SFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFG 162 (253)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~ 162 (253)
.+. .........+...+..........++|++.++++.|+++|++++++||+....++..++.+|+.. +|+.+
T Consensus 77 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~--~f~~i 149 (231)
T 3kzx_A 77 LLG-----KRWKEATILYENSLEKSQKSDNFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTH--YFDSI 149 (231)
T ss_dssp HHG-----GGHHHHHHHHHHHHHHCCSCCCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGG--GCSEE
T ss_pred HhC-----chHHHHHHHHHHHHhhhcccccceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchh--heeeE
Confidence 221 12344445555555522223446889999999999999999999999999999999999999988 99999
Q ss_pred eeccccCccCCCHHHHHHHHHHhCCCCCC-ceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHH
Q 039449 163 VFSGLEGVEKPDPRIYEIALERAGNIAPE-EALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVA 241 (253)
Q Consensus 163 ~~~~~~~~~kp~~~~~~~~~~~~~~~~~~-~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~e 241 (253)
+.+...+..||+++++..++++++ ++++ ++++|||+. +|+.+|+++|+.+|++.+ +.. ..++++++++.|
T Consensus 150 ~~~~~~~~~Kp~~~~~~~~~~~lg-i~~~~~~v~vGD~~-~Di~~a~~aG~~~v~~~~-~~~------~~~~~~~~~~~e 220 (231)
T 3kzx_A 150 IGSGDTGTIKPSPEPVLAALTNIN-IEPSKEVFFIGDSI-SDIQSAIEAGCLPIKYGS-TNI------IKDILSFKNFYD 220 (231)
T ss_dssp EEETSSSCCTTSSHHHHHHHHHHT-CCCSTTEEEEESSH-HHHHHHHHTTCEEEEECC------------CCEEESSHHH
T ss_pred EcccccCCCCCChHHHHHHHHHcC-CCcccCEEEEcCCH-HHHHHHHHCCCeEEEECC-CCC------CCCceeeCCHHH
Confidence 999999999999999999999999 9999 999999999 999999999999999973 211 235679999999
Q ss_pred HHHHHhhhh
Q 039449 242 VKEFLTSEI 250 (253)
Q Consensus 242 l~~~l~~~~ 250 (253)
|.++|.+.+
T Consensus 221 l~~~l~~~l 229 (231)
T 3kzx_A 221 IRNFICQLI 229 (231)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999998765
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.97 E-value=9.7e-31 Score=199.44 Aligned_cols=220 Identities=20% Similarity=0.238 Sum_probs=160.2
Q ss_pred ccCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHH
Q 039449 4 LSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDS 83 (253)
Q Consensus 4 ~~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (253)
+.++|+|+||+||||+++...+..++..+++++|........... +.|.+ ....+...+...
T Consensus 20 ~~~~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~--------------~~g~~----~~~~~~~~~~~~ 81 (243)
T 2hsz_A 20 MTQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMT--------------WIGNG----ADVLSQRAVDWA 81 (243)
T ss_dssp CSSCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCCHHHHHH--------------HCSSC----HHHHHHHHHHHH
T ss_pred CccCCEEEEcCCCcCCCCHHHHHHHHHHHHHHcCCCCCCHHHHHH--------------HhCch----HHHHHHHHhhhh
Confidence 456899999999999999888888999999999987544332221 12221 222222222211
Q ss_pred HHHcCCCCChHHHHHH---HHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCccee
Q 039449 84 FVRAGYDYDEDTFEKI---FRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWD 160 (253)
Q Consensus 84 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~ 160 (253)
....+.....+.+... +...+..... ....++||+.++|+.|+++|++++++||+....++.+++.+|+.. +|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~--~f~ 158 (243)
T 2hsz_A 82 CKQAEKELTEDEFKYFKRQFGFYYGENLC-NISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDH--LFS 158 (243)
T ss_dssp HHHHTCCCCHHHHHHHHHHHHHHHHHHTT-SSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG--GCS
T ss_pred hccccccCCHHHHHHHHHHHHHHHHHhcc-ccCccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchh--eEE
Confidence 1111233333333322 2333333222 235789999999999999999999999999988999999999988 899
Q ss_pred EeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHH
Q 039449 161 FGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLV 240 (253)
Q Consensus 161 ~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~ 240 (253)
.++.++..+..||+++++..++++++ +++++|++|||+. +|+.+|+++|+.++++.+............+++++.++.
T Consensus 159 ~~~~~~~~~~~Kp~~~~~~~~~~~~~-~~~~~~~~vGD~~-~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~~~ 236 (243)
T 2hsz_A 159 EMLGGQSLPEIKPHPAPFYYLCGKFG-LYPKQILFVGDSQ-NDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFA 236 (243)
T ss_dssp EEECTTTSSSCTTSSHHHHHHHHHHT-CCGGGEEEEESSH-HHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGG
T ss_pred EEEecccCCCCCcCHHHHHHHHHHhC-cChhhEEEEcCCH-HHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECCHH
Confidence 98888888889999999999999999 9999999999999 999999999999999984221111222344668999999
Q ss_pred HHHHHH
Q 039449 241 AVKEFL 246 (253)
Q Consensus 241 el~~~l 246 (253)
||.+++
T Consensus 237 el~~~l 242 (243)
T 2hsz_A 237 DILKIT 242 (243)
T ss_dssp GGGGGT
T ss_pred HHHHHh
Confidence 987654
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-31 Score=206.61 Aligned_cols=224 Identities=11% Similarity=0.076 Sum_probs=163.9
Q ss_pred ccCceEEEEecCCceeccCCCH-HHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHH-----
Q 039449 4 LSRLRCITVDVTGTLLAYKGEL-GDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWK----- 77 (253)
Q Consensus 4 ~~~~k~i~fD~DGTL~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 77 (253)
++++|+|+||+||||+++.... ...+..+++++|+.. ....... ..+. .....+.
T Consensus 11 ~~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~~~-~~~~~~~--------------~~~~----~~~~~~~~~~~~ 71 (277)
T 3iru_A 11 AGPVEALILDWAGTTIDFGSLAPVYAFMELFKQEGIEV-TQAEARE--------------PMGT----EKSEHIRRMLGN 71 (277)
T ss_dssp CCCCCEEEEESBTTTBSTTCCHHHHHHHHHHHTTTCCC-CHHHHHT--------------TTTS----CHHHHHHHHTTS
T ss_pred hccCcEEEEcCCCCcccCCcccHHHHHHHHHHHhCCCC-CHHHHHH--------------HhcC----chHHHHHHhccc
Confidence 3468999999999999988776 788899999999874 3222221 1111 1111111
Q ss_pred -HHHHHHHHHcCCCCChHHHHHHHHHHHHHhCC--CCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCC
Q 039449 78 -TCVRDSFVRAGYDYDEDTFEKIFRRIYASFGS--SAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVN 154 (253)
Q Consensus 78 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~ 154 (253)
.........++...+.+.+...+..+...... .....++|++.++|+.|++.|++++++||.....++..++.+|+.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~ 151 (277)
T 3iru_A 72 SRIANAWLSIKGQASNEEDIKRLYDLFAPIQTRIVAQRSQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQ 151 (277)
T ss_dssp HHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHHTCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhccCccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcc
Confidence 11222234445555555554444433222110 012478899999999999999999999999998899999999988
Q ss_pred CCcc-eeEeeeccccCccCCCHHHHHHHHHHhCCCCC-CceEEEcCCcccchhhhhhcCCeEEEEcCCCC----------
Q 039449 155 QGTE-WDFGVFSGLEGVEKPDPRIYEIALERAGNIAP-EEALHIGDSFRKDYVPAKSVGMHALLVDRFKT---------- 222 (253)
Q Consensus 155 ~~~~-f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~-~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~---------- 222 (253)
. + |+.++.++..+..||++.++..+++++| +++ ++|++|||+. ||+.+|+++|+.+|++.+...
T Consensus 152 ~--~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg-i~~~~~~i~vGD~~-~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~ 227 (277)
T 3iru_A 152 G--YTPASTVFATDVVRGRPFPDMALKVALELE-VGHVNGCIKVDDTL-PGIEEGLRAGMWTVGVSCSGNEVGLDREDWQ 227 (277)
T ss_dssp T--CCCSEEECGGGSSSCTTSSHHHHHHHHHHT-CSCGGGEEEEESSH-HHHHHHHHTTCEEEEECSSSTTTCCCHHHHH
T ss_pred c--CCCceEecHHhcCCCCCCHHHHHHHHHHcC-CCCCccEEEEcCCH-HHHHHHHHCCCeEEEEecCCcccccchhhhh
Confidence 7 6 8888888888899999999999999999 999 9999999999 999999999999999994322
Q ss_pred ------------CChhhhhh-cCCcccCCHHHHHHHHhhhh
Q 039449 223 ------------PDAKEWRK-SGAIVLPDLVAVKEFLTSEI 250 (253)
Q Consensus 223 ------------~~~~~~~~-~~~~~i~~l~el~~~l~~~~ 250 (253)
...+.+.. .++++++|+.||.++|.+..
T Consensus 228 ~~~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~~ 268 (277)
T 3iru_A 228 ALSSDEQQSYRQHAEQRLFNAGAHYVIDSVADLETVITDVN 268 (277)
T ss_dssp HSCHHHHHHHHHHHHHHHHHHTCSEEESSGGGTHHHHHHHH
T ss_pred hcchhhhhhhhhhhHHHHhhCCCCEEecCHHHHHHHHHHHH
Confidence 12233333 36789999999999987643
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-30 Score=197.52 Aligned_cols=226 Identities=17% Similarity=0.205 Sum_probs=167.2
Q ss_pred cCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHH
Q 039449 5 SRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSF 84 (253)
Q Consensus 5 ~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (253)
+++|+|+||+||||+++...+..++..+++++|.+.. .......+... ....... .............+....
T Consensus 4 ~~~k~i~fD~DGTL~d~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~----~~~~~~~--~~~~~~~~~~~~~~~~~~ 76 (240)
T 3smv_A 4 TDFKALTFDCYGTLIDWETGIVNALQPLAKRTGKTFT-SDELLEVFGRN----ESPQQTE--TPGALYQDILRAVYDRIA 76 (240)
T ss_dssp GGCSEEEECCBTTTBCHHHHHHHHTHHHHHHHTCCCC-HHHHHHHHHHH----HGGGCCS--SCCSCHHHHHHHHHHHHH
T ss_pred ccceEEEEeCCCcCcCCchhHHHHHHHHHHHhCCCCC-HHHHHHHHHHH----HHHHHhh--CCCCChhHHHHHHHHHHH
Confidence 4589999999999999988888899999999998743 33333322221 1111111 122344555566677777
Q ss_pred HHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeee
Q 039449 85 VRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVF 164 (253)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~ 164 (253)
...+.....+.. ..+.. .. ..+.++|++.++|+.|++ |++++++||+....+...++. +.. +|+.+++
T Consensus 77 ~~~~~~~~~~~~-~~~~~----~~--~~~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~--l~~--~fd~i~~ 144 (240)
T 3smv_A 77 KEWGLEPDAAER-EEFGT----SV--KNWPAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAK--LGV--EFDHIIT 144 (240)
T ss_dssp HHTTCCCCHHHH-HHHHT----GG--GGCCBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTT--TCS--CCSEEEE
T ss_pred HHhCCCCCHHHH-HHHHH----HH--hcCCCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHh--cCC--ccCEEEE
Confidence 777776544332 22211 11 224789999999999999 799999999999888877777 445 8999999
Q ss_pred ccccCccCCCHHHHHHH---HHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCC------CCCChhhhhhcCCcc
Q 039449 165 SGLEGVEKPDPRIYEIA---LERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRF------KTPDAKEWRKSGAIV 235 (253)
Q Consensus 165 ~~~~~~~kp~~~~~~~~---~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~------~~~~~~~~~~~~~~~ 235 (253)
+.+.+..||+|..|..+ ++++| +++++|++|||+..+|+.+|+++|++++++++. +..........++++
T Consensus 145 ~~~~~~~KP~~~~~~~~l~~~~~lg-i~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v 223 (240)
T 3smv_A 145 AQDVGSYKPNPNNFTYMIDALAKAG-IEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFR 223 (240)
T ss_dssp HHHHTSCTTSHHHHHHHHHHHHHTT-CCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEE
T ss_pred ccccCCCCCCHHHHHHHHHHHHhcC-CCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEE
Confidence 99999999999999998 88999 999999999999448999999999999999953 222222223456799
Q ss_pred cCCHHHHHHHHhhhh
Q 039449 236 LPDLVAVKEFLTSEI 250 (253)
Q Consensus 236 i~~l~el~~~l~~~~ 250 (253)
++|+.||.++|.+.+
T Consensus 224 ~~~~~el~~~l~~~l 238 (240)
T 3smv_A 224 FNSMGEMAEAHKQAL 238 (240)
T ss_dssp ESSHHHHHHHHHHHH
T ss_pred eCCHHHHHHHHHHHh
Confidence 999999999998754
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-30 Score=199.19 Aligned_cols=231 Identities=15% Similarity=0.168 Sum_probs=159.2
Q ss_pred cCceEEEEecCCceeccCCCHHHHHHHHHHH----cCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHH
Q 039449 5 SRLRCITVDVTGTLLAYKGELGDYYCMAAKS----VGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCV 80 (253)
Q Consensus 5 ~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (253)
+++|+|+||+||||+|+...+..++..+++. +|... ..... ........... .. .....+..++....+
T Consensus 16 ~~~k~viFDlDGTLvds~~~~~~a~~~~~~~~~~~~g~~~-~~~~~---~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~ 88 (260)
T 2gfh_A 16 SRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKE-EAEII---CDKVQVKLSKE--CF-HPYSTCITDVRTSHW 88 (260)
T ss_dssp CCCCEEEECCBTTTBCHHHHHHHHHHHHHHHHHHTTCCCT-HHHHH---HHHHHHHHHTC--CC-C----CHHHHHHHHH
T ss_pred ccceEEEEcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCcH-HHHHH---HHHHHHHHHhh--cc-ccccccHHHHHHHHH
Confidence 4689999999999999998888888887764 45432 11111 11112221111 11 112234444333333
Q ss_pred HHHHHHc-CCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcce
Q 039449 81 RDSFVRA-GYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEW 159 (253)
Q Consensus 81 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f 159 (253)
...+... +.....+.....+..+..... ..+.++||+.++|+.|++ +++++|+||++...+...++.+|+.. +|
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~--~f 163 (260)
T 2gfh_A 89 EEAIQETKGGADNRKLAEECYFLWKSTRL--QHMILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQS--YF 163 (260)
T ss_dssp HHHHHHHHCSSCCHHHHHHHHHHHHHHHH--HTCCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGG--GC
T ss_pred HHHHHHhcCccchHHHHHHHHHHHHHHHH--hcCCCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHh--hh
Confidence 3333222 222233333333333322211 124789999999999997 59999999999998999999999988 99
Q ss_pred eEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCC-cccchhhhhhcCC-eEEEEcCCCCCChhhhhhcCCcccC
Q 039449 160 DFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDS-FRKDYVPAKSVGM-HALLVDRFKTPDAKEWRKSGAIVLP 237 (253)
Q Consensus 160 ~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~-~~~Di~~a~~~G~-~~i~~~~~~~~~~~~~~~~~~~~i~ 237 (253)
+.++++++.+..||+|+.|..++++++ +++++|++|||+ . +|+.+|+++|+ .++++.+.. .........+++++.
T Consensus 164 ~~i~~~~~~~~~KP~p~~~~~~~~~~~-~~~~~~~~vGDs~~-~Di~~A~~aG~~~~i~v~~~~-~~~~~~~~~~~~~i~ 240 (260)
T 2gfh_A 164 DAIVIGGEQKEEKPAPSIFYHCCDLLG-VQPGDCVMVGDTLE-TDIQGGLNAGLKATVWINKSG-RVPLTSSPMPHYMVS 240 (260)
T ss_dssp SEEEEGGGSSSCTTCHHHHHHHHHHHT-CCGGGEEEEESCTT-THHHHHHHTTCSEEEEECTTC-CCCSSCCCCCSEEES
T ss_pred heEEecCCCCCCCCCHHHHHHHHHHcC-CChhhEEEECCCch-hhHHHHHHCCCceEEEEcCCC-CCcCcccCCCCEEEC
Confidence 999999999999999999999999999 999999999996 7 99999999999 899997432 211112234568999
Q ss_pred CHHHHHHHHhhhh
Q 039449 238 DLVAVKEFLTSEI 250 (253)
Q Consensus 238 ~l~el~~~l~~~~ 250 (253)
++.||.+++.+..
T Consensus 241 ~~~el~~~l~~~~ 253 (260)
T 2gfh_A 241 SVLELPALLQSID 253 (260)
T ss_dssp SGGGHHHHHHHHT
T ss_pred CHHHHHHHHHHHh
Confidence 9999999887643
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-31 Score=197.78 Aligned_cols=205 Identities=17% Similarity=0.230 Sum_probs=157.9
Q ss_pred CceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHH
Q 039449 6 RLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFV 85 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (253)
++|+|+||+||||+++...+..++..+++++|... ........ .|. + ....++
T Consensus 3 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~-~~~~~~~~--------------~g~----~--------~~~~~~ 55 (209)
T 2hdo_A 3 TYQALMFDIDGTLTNSQPAYTTVMREVLATYGKPF-SPAQAQKT--------------FPM----A--------AEQAMT 55 (209)
T ss_dssp CCSEEEECSBTTTEECHHHHHHHHHHHHHTTTCCC-CHHHHHHH--------------TTS----C--------HHHHHH
T ss_pred cccEEEEcCCCCCcCCHHHHHHHHHHHHHHhCCCC-CHHHHHHH--------------cCC----c--------HHHHHH
Confidence 47999999999999999888889999999998743 33322211 121 1 122233
Q ss_pred HcCCCCChHHHHHHHHHHHHHhCC-CCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeee
Q 039449 86 RAGYDYDEDTFEKIFRRIYASFGS-SAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVF 164 (253)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~ 164 (253)
..+.. ...+...+..++..... .....++|++.++|+.|+++ ++++++||+....++..++.+|+.. +|+.+++
T Consensus 56 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~--~f~~~~~ 130 (209)
T 2hdo_A 56 ELGIA--ASEFDHFQAQYEDVMASHYDQIELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMM--RMAVTIS 130 (209)
T ss_dssp HTTCC--GGGHHHHHHHHHHHHTTCGGGCEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGG--GEEEEEC
T ss_pred HcCCC--HHHHHHHHHHHHHHHhhhcccCCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHh--hccEEEe
Confidence 33432 23344444444443321 12357899999999999999 9999999999988999999999988 9999988
Q ss_pred ccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHHHH
Q 039449 165 SGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKE 244 (253)
Q Consensus 165 ~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~~ 244 (253)
+...+..||+++++..++++++ +++++|++|||+. +|+.+|+++|+.++++++ +....+.+.. +++++.++.|+.+
T Consensus 131 ~~~~~~~KP~~~~~~~~~~~~~-~~~~~~i~vGD~~-~Di~~a~~aG~~~~~~~~-~~~~~~~~~~-a~~~~~~~~el~~ 206 (209)
T 2hdo_A 131 ADDTPKRKPDPLPLLTALEKVN-VAPQNALFIGDSV-SDEQTAQAANVDFGLAVW-GMDPNADHQK-VAHRFQKPLDILE 206 (209)
T ss_dssp GGGSSCCTTSSHHHHHHHHHTT-CCGGGEEEEESSH-HHHHHHHHHTCEEEEEGG-GCCTTGGGSC-CSEEESSGGGGGG
T ss_pred cCcCCCCCCCcHHHHHHHHHcC-CCcccEEEECCCh-hhHHHHHHcCCeEEEEcC-CCCChhhhcc-CCEEeCCHHHHHH
Confidence 8888999999999999999999 9999999999998 999999999999999984 3333344444 7789999999876
Q ss_pred HH
Q 039449 245 FL 246 (253)
Q Consensus 245 ~l 246 (253)
+|
T Consensus 207 ~l 208 (209)
T 2hdo_A 207 LF 208 (209)
T ss_dssp GC
T ss_pred hh
Confidence 54
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.7e-30 Score=193.41 Aligned_cols=228 Identities=21% Similarity=0.285 Sum_probs=162.0
Q ss_pred CceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHH
Q 039449 6 RLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFV 85 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (253)
++|+|+||+||||+++...+...+..+++++|..... .....+..........+...|. +... +...+.....
T Consensus 3 m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~g~----~~~~-~~~~~~~~~~ 75 (235)
T 2om6_A 3 EVKLVTFDVWNTLLDLNIMLDEFSHQLAKISGLHIKD--VANAVIEVRNEIKKMRAQASED----PRKV-LTGSQEALAG 75 (235)
T ss_dssp CCCEEEECCBTTTBCHHHHHHHHHHHHHHHHTCCHHH--HHHHHHHHHHHHHHHHHTTCCC----TTTH-HHHHHHHHHH
T ss_pred CceEEEEeCCCCCCCcchhHHHHHHHHHHHcCCCCcH--HHHHHHHHHHHHHHHhhhhcCC----Ccch-HHHHHHHHHH
Confidence 3799999999999999888888888999998875321 1111111100000011111122 1111 1223334444
Q ss_pred HcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCC---cchhhhhhhhcCCCCCcceeEe
Q 039449 86 RAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAE---YRYQDVILPALGVNQGTEWDFG 162 (253)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~---~~~~~~~l~~~gl~~~~~f~~~ 162 (253)
..+.. .......+..+...... ..++|++.++++.|++.|++++++||+. ...++..++.+|+.. +|+.+
T Consensus 76 ~~~~~--~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~--~f~~~ 148 (235)
T 2om6_A 76 KLKVD--VELVKRATARAILNVDE---SLVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLME--FIDKT 148 (235)
T ss_dssp HHTCC--HHHHHHHHHHHHHHCCG---GGBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGG--GCSEE
T ss_pred HhCCC--HHHHHHHHHHHHHhccc---cCcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHH--Hhhhh
Confidence 44543 23333444433333221 2468999999999999999999999999 777888899999988 99999
Q ss_pred eeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHH
Q 039449 163 VFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAV 242 (253)
Q Consensus 163 ~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el 242 (253)
+++.+.+..||+++.+..+++++| +++++|++|||+..||+.+|+.+|++++++++.+ . .......++++++++.|+
T Consensus 149 ~~~~~~~~~kp~~~~~~~~~~~lg-i~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~-~-~~~~~~~~~~~~~~~~el 225 (235)
T 2om6_A 149 FFADEVLSYKPRKEMFEKVLNSFE-VKPEESLHIGDTYAEDYQGARKVGMWAVWINQEG-D-KVRKLEERGFEIPSIANL 225 (235)
T ss_dssp EEHHHHTCCTTCHHHHHHHHHHTT-CCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTC-C-SCEEEETTEEEESSGGGH
T ss_pred eeccccCCCCCCHHHHHHHHHHcC-CCccceEEECCChHHHHHHHHHCCCEEEEECCCC-C-CcccCCCCcchHhhHHHH
Confidence 998888999999999999999999 9999999999998679999999999999999543 2 222233456899999999
Q ss_pred HHHHhhhh
Q 039449 243 KEFLTSEI 250 (253)
Q Consensus 243 ~~~l~~~~ 250 (253)
.++|.+..
T Consensus 226 ~~~l~~~~ 233 (235)
T 2om6_A 226 KDVIELIS 233 (235)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHHh
Confidence 99987654
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-30 Score=198.88 Aligned_cols=229 Identities=18% Similarity=0.278 Sum_probs=170.3
Q ss_pred ccCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHH
Q 039449 4 LSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDS 83 (253)
Q Consensus 4 ~~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (253)
.|++|+|+||+||||+++...+...+..+++++|.+.... .....+........... ..+..........+...+...
T Consensus 19 ~m~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 96 (254)
T 3umc_A 19 FQGMRAILFDVFGTLVDWRSSLIEQFQALERELGGTLPCV-ELTDRWRQQYKPAMDRV-RNGQAPWQHLDQLHRQSLEAL 96 (254)
T ss_dssp SSSCCEEEECCBTTTEEHHHHHHHHHHHHHHHSSSCCCHH-HHHHHHHHHTHHHHHHH-HTTSSCCCCHHHHHHHHHHHH
T ss_pred ccCCcEEEEeCCCccEecCccHHHHHHHHHHHhcCCCCHH-HHHHHHHHHHHHHHHHH-hcccCCcccHHHHHHHHHHHH
Confidence 4568999999999999998888899999999999875432 22222221111111110 011122234556666667777
Q ss_pred HHHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEee
Q 039449 84 FVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGV 163 (253)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~ 163 (253)
+...+............. .. ....++|++.++|+.|++. ++++++||.....+...++.+|+. |+.++
T Consensus 97 ~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~----f~~~~ 164 (254)
T 3umc_A 97 AGEFGLALDEALLQRITG----FW---HRLRPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP----WDMLL 164 (254)
T ss_dssp HHHTTCCCCHHHHHHHHG----GG---GSCEECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC----CSEEC
T ss_pred HHHhCCCCCHHHHHHHHH----HH---hcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC----cceEE
Confidence 888887765554333221 11 1247899999999999986 999999999998888899999874 68878
Q ss_pred eccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCC---CCCChhhh--hhcCCcccCC
Q 039449 164 FSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRF---KTPDAKEW--RKSGAIVLPD 238 (253)
Q Consensus 164 ~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~---~~~~~~~~--~~~~~~~i~~ 238 (253)
.++..+..||++.+|+.+++++| +++++|++|||+. ||+.+|+.+|+.++++++. +....+.+ ...++++++|
T Consensus 165 ~~~~~~~~kp~~~~~~~~~~~lg-i~~~~~~~iGD~~-~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~ 242 (254)
T 3umc_A 165 CADLFGHYKPDPQVYLGACRLLD-LPPQEVMLCAAHN-YDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASD 242 (254)
T ss_dssp CHHHHTCCTTSHHHHHHHHHHHT-CCGGGEEEEESCH-HHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESS
T ss_pred eecccccCCCCHHHHHHHHHHcC-CChHHEEEEcCch-HhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECC
Confidence 88888899999999999999999 9999999999998 9999999999999999942 33233333 3456799999
Q ss_pred HHHHHHHHhh
Q 039449 239 LVAVKEFLTS 248 (253)
Q Consensus 239 l~el~~~l~~ 248 (253)
+.||.++|..
T Consensus 243 l~el~~~l~~ 252 (254)
T 3umc_A 243 LLDLHRQLAA 252 (254)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHhcc
Confidence 9999998853
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.5e-31 Score=199.32 Aligned_cols=207 Identities=16% Similarity=0.315 Sum_probs=158.6
Q ss_pred CceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHH
Q 039449 6 RLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFV 85 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (253)
++|+|+||+||||+++...+..++..+++++|.+ .....+.. ..|. + ....+.
T Consensus 28 mik~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~-~~~~~~~~--------------~~g~----~--------~~~~~~ 80 (240)
T 3sd7_A 28 NYEIVLFDLDGTLTDPKEGITKSIQYSLNSFGIK-EDLENLDQ--------------FIGP----P--------LHDTFK 80 (240)
T ss_dssp CCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCC-CCGGGGGG--------------GSSS----C--------HHHHHH
T ss_pred hccEEEEecCCcCccCHHHHHHHHHHHHHHcCCC-CCHHHHHH--------------HhCc----c--------HHHHHH
Confidence 4799999999999999888888999999999987 33222211 1121 1 111111
Q ss_pred HcCCCCChHHHHHH---HHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEe
Q 039449 86 RAGYDYDEDTFEKI---FRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFG 162 (253)
Q Consensus 86 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~ 162 (253)
... ..+.+..... +...+.... .....++|++.++|+.|++.|++++++||+....++..++.+|+.. +|+.+
T Consensus 81 ~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~--~f~~~ 156 (240)
T 3sd7_A 81 EYY-KFEDKKAKEAVEKYREYFADKG-IFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDR--YFKYI 156 (240)
T ss_dssp HTS-CCCHHHHHHHHHHHHHHHHHTG-GGCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGG--GCSEE
T ss_pred HHh-CCCHHHHHHHHHHHHHHHHHhc-ccccccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHh--hEEEE
Confidence 110 1233333332 333332211 1234789999999999999999999999999989999999999988 99999
Q ss_pred eeccccCccCCCHHHHHHHHHHhCCCC-CCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhh-hhcCCcccCCHH
Q 039449 163 VFSGLEGVEKPDPRIYEIALERAGNIA-PEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEW-RKSGAIVLPDLV 240 (253)
Q Consensus 163 ~~~~~~~~~kp~~~~~~~~~~~~~~~~-~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~-~~~~~~~i~~l~ 240 (253)
+.++..+..||+++++..+++++| ++ +++|++|||+. +|+.+|+++|++++++.+ +....+.+ ...++++++|++
T Consensus 157 ~~~~~~~~~kp~~~~~~~~~~~~g-~~~~~~~i~vGD~~-~Di~~a~~aG~~~i~v~~-g~~~~~~~~~~~ad~v~~~~~ 233 (240)
T 3sd7_A 157 AGSNLDGTRVNKNEVIQYVLDLCN-VKDKDKVIMVGDRK-YDIIGAKKIGIDSIGVLY-GYGSFEEISESEPTYIVENVE 233 (240)
T ss_dssp EEECTTSCCCCHHHHHHHHHHHHT-CCCGGGEEEEESSH-HHHHHHHHHTCEEEEESS-SSCCHHHHHHHCCSEEESSST
T ss_pred EeccccCCCCCCHHHHHHHHHHcC-CCCCCcEEEECCCH-HHHHHHHHCCCCEEEEeC-CCCCHHHHhhcCCCEEECCHH
Confidence 999999999999999999999999 99 99999999999 999999999999999993 44444443 355679999999
Q ss_pred HHHHHH
Q 039449 241 AVKEFL 246 (253)
Q Consensus 241 el~~~l 246 (253)
||.++|
T Consensus 234 el~~~l 239 (240)
T 3sd7_A 234 SIKDIL 239 (240)
T ss_dssp THHHHH
T ss_pred HHHHHh
Confidence 999876
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-29 Score=190.25 Aligned_cols=229 Identities=26% Similarity=0.371 Sum_probs=161.7
Q ss_pred ceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHHH
Q 039449 7 LRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFVR 86 (253)
Q Consensus 7 ~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (253)
+|+|+||+||||+++...+......+.+.+.............+........... .|.. ...........+......
T Consensus 2 ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~g~~-~~~~~~~~~~~~~~~~~~ 78 (234)
T 3u26_A 2 IRAVFFDSLGTLNSVEGAAKSHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNY--AGKP-YRPLRDILEEVMRKLAEK 78 (234)
T ss_dssp CCEEEECSTTTTBCHHHHHHHHHHHHHHHCSSSSSCHHHHHHHHHHHHHHHHHHH--TTSB-CCCHHHHHHHHHHHHHHH
T ss_pred CcEEEEcCCCccccccchhHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHh--cccC-CCcHHHHHHHHHHHHHHH
Confidence 7999999999999987544443333444333222233333333332222211111 1211 112344445556666777
Q ss_pred cCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeecc
Q 039449 87 AGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSG 166 (253)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~ 166 (253)
.+................. . ..++|++.++|+.|++. ++++++||+....+...++.+|+.. +|+.++.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~--~f~~~~~~~ 149 (234)
T 3u26_A 79 YGFKYPENFWEISLRMSQR-Y-----GELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKD--LFDSITTSE 149 (234)
T ss_dssp HTCCCCTTHHHHHHHHHHH-H-----CCBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGG--GCSEEEEHH
T ss_pred cCchHHHHHHHHHHHHHHh-h-----CCcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHH--HcceeEecc
Confidence 7654333322222222222 1 37789999999999999 9999999999998999999999988 999999999
Q ss_pred ccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHHHHHH
Q 039449 167 LEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKEFL 246 (253)
Q Consensus 167 ~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~~~l 246 (253)
..+..||+++++..+++++| +++++|++|||+..||+.+|+++|++++++++.+ .. ......++++++|+.|+.++|
T Consensus 150 ~~~~~kp~~~~~~~~~~~~~-~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~-~~-~~~~~~a~~~~~~~~el~~~l 226 (234)
T 3u26_A 150 EAGFFKPHPRIFELALKKAG-VKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKG-EK-REFWDKCDFIVSDLREVIKIV 226 (234)
T ss_dssp HHTBCTTSHHHHHHHHHHHT-CCGGGEEEEESCTTTTHHHHHTTTCEEEEECSSS-TT-GGGGGGCSEEESSTHHHHHHH
T ss_pred ccCCCCcCHHHHHHHHHHcC-CCchhEEEEcCCcHHHHHHHHHcCCEEEEECCCC-Cc-cccccCCCEeeCCHHHHHHHH
Confidence 89999999999999999999 9999999999996589999999999999999533 22 223346779999999999999
Q ss_pred hhhh
Q 039449 247 TSEI 250 (253)
Q Consensus 247 ~~~~ 250 (253)
.+..
T Consensus 227 ~~~~ 230 (234)
T 3u26_A 227 DELN 230 (234)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 8754
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.8e-30 Score=194.68 Aligned_cols=225 Identities=19% Similarity=0.223 Sum_probs=151.3
Q ss_pred CceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHH
Q 039449 6 RLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFV 85 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (253)
++|+|+||+||||+++...+.. +.+.++. ........+..............+ ...+........+...+.
T Consensus 3 m~k~viFDlDGTL~d~~~~~~~----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 73 (232)
T 1zrn_A 3 YIKGIAFDLYGTLFDVHSVVGR----CDEAFPG---RGREISALWRQKQLEYTWLRSLMN--RYVNFQQATEDALRFTCR 73 (232)
T ss_dssp CCCEEEECSBTTTEETHHHHHH----HHHHSTT---THHHHHHHHHHHHHHHHHHHHHHT--CCCCHHHHHHHHHHHHHH
T ss_pred CceEEEEecCCcccCchhhHHH----HHHHccc---cHHHHHHHHHHHHHHHHHHHHHhc--CCCCHHHHHHHHHHHHHH
Confidence 4799999999999997643333 3333331 111111111111000000000001 111222223333455556
Q ss_pred HcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeec
Q 039449 86 RAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFS 165 (253)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~ 165 (253)
..+.....+.... ....+. ...++|++.++|+.|+++|++++++||+....++..++.+|+.. +|+.++.+
T Consensus 74 ~~~~~~~~~~~~~----~~~~~~---~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~--~f~~~~~~ 144 (232)
T 1zrn_A 74 HLGLDLDARTRST----LCDAYL---RLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRD--GFDHLLSV 144 (232)
T ss_dssp HHTCCCCHHHHHH----HHHGGG---GCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG--GCSEEEES
T ss_pred HcCCCCCHHHHHH----HHHHHc---cCCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHh--hhheEEEe
Confidence 6666544433322 222221 24788999999999999999999999999988999999999988 89999999
Q ss_pred cccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHHHHH
Q 039449 166 GLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKEF 245 (253)
Q Consensus 166 ~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~~~ 245 (253)
+..+..||+++.+..++++++ +++++|++|||+. +|+.+|+++|++++++++.+. ..+.....++++++++.|+.++
T Consensus 145 ~~~~~~Kp~~~~~~~~~~~~~-~~~~~~~~iGD~~-~Di~~a~~aG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~el~~~ 221 (232)
T 1zrn_A 145 DPVQVYKPDNRVYELAEQALG-LDRSAILFVASNA-WDATGARYFGFPTCWINRTGN-VFEEMGQTPDWEVTSLRAVVEL 221 (232)
T ss_dssp GGGTCCTTSHHHHHHHHHHHT-SCGGGEEEEESCH-HHHHHHHHHTCCEEEECTTCC-CCCSSSCCCSEEESSHHHHHTT
T ss_pred cccCCCCCCHHHHHHHHHHcC-CCcccEEEEeCCH-HHHHHHHHcCCEEEEEcCCCC-CccccCCCCCEEECCHHHHHHH
Confidence 888999999999999999999 9999999999999 999999999999999985332 2223334567899999999988
Q ss_pred Hhhhhh
Q 039449 246 LTSEIS 251 (253)
Q Consensus 246 l~~~~~ 251 (253)
+.+..+
T Consensus 222 l~~~~~ 227 (232)
T 1zrn_A 222 FETAAG 227 (232)
T ss_dssp C-----
T ss_pred HHhhcc
Confidence 876543
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=9.5e-30 Score=193.54 Aligned_cols=222 Identities=19% Similarity=0.254 Sum_probs=152.6
Q ss_pred cCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHH---HHHHHhhCCCCCCCCCCChHHHHHHHHH
Q 039449 5 SRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLA---YKEMAKNYPCFGFAAKMPNIVWWKTCVR 81 (253)
Q Consensus 5 ~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (253)
|++|+|+||+||||+++...+..+ .+.++.. ...+...+... ....... .+. ...........+.
T Consensus 12 M~~k~viFDlDGTL~d~~~~~~~~----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~ 79 (240)
T 2no4_A 12 DSLRACVFDAYGTLLDVHSAVMRN----ADEVGAS---AEALSMLWRQRQLEYSWTRTL---MHQ--YADFWQLTDEALT 79 (240)
T ss_dssp SCCCEEEECCBTTTBCTTHHHHTT----HHHHCTT---HHHHHHHHHHHHHHHHHHHHH---TTC--CCCHHHHHHHHHH
T ss_pred ccccEEEEeCCCcccccHhHHHHH----HHHhcch---hHHHHHHHHHHHHHHHHHHHH---hcC--CCCHHHHHHHHHH
Confidence 458999999999999987543322 2233311 11111111111 1111111 111 1122222333344
Q ss_pred HHHHHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeE
Q 039449 82 DSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDF 161 (253)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~ 161 (253)
..+...+.....+...... ..+. ...++|++.++|+.|+++|++++++||+....++..++.+|+.. +|+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~--~f~~ 150 (240)
T 2no4_A 80 FALRTYHLEDRKGLKDRLM-SAYK------ELSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDR--VLDS 150 (240)
T ss_dssp HHHHHTTCTTHHHHHHHHH-HHHH------TCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG--GCSE
T ss_pred HHHHHhCCCCCHHHHHHHH-HHHh------cCCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHH--HcCE
Confidence 5555555543333322222 2222 14788999999999999999999999999988999999999988 9999
Q ss_pred eeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcC-CcccCCHH
Q 039449 162 GVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSG-AIVLPDLV 240 (253)
Q Consensus 162 ~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~-~~~i~~l~ 240 (253)
++.++..+..||+++++..+++++| +++++|++|||+. +|+.+|+++|+.++++.+... .+.....+ +++++++.
T Consensus 151 ~~~~~~~~~~Kp~~~~~~~~~~~~~-~~~~~~~~iGD~~-~Di~~a~~aG~~~~~v~~~~~--~~~~~~~~~~~~~~~~~ 226 (240)
T 2no4_A 151 CLSADDLKIYKPDPRIYQFACDRLG-VNPNEVCFVSSNA-WDLGGAGKFGFNTVRINRQGN--PPEYEFAPLKHQVNSLS 226 (240)
T ss_dssp EEEGGGTTCCTTSHHHHHHHHHHHT-CCGGGEEEEESCH-HHHHHHHHHTCEEEEECTTCC--CCCCTTSCCSEEESSGG
T ss_pred EEEccccCCCCCCHHHHHHHHHHcC-CCcccEEEEeCCH-HHHHHHHHCCCEEEEECCCCC--CCcccCCCCceeeCCHH
Confidence 9999999999999999999999999 9999999999999 999999999999999985332 22233445 78999999
Q ss_pred HHHHHHhhhhh
Q 039449 241 AVKEFLTSEIS 251 (253)
Q Consensus 241 el~~~l~~~~~ 251 (253)
||.++|.+..+
T Consensus 227 el~~~l~~~~~ 237 (240)
T 2no4_A 227 ELWPLLAKNVT 237 (240)
T ss_dssp GHHHHHCC---
T ss_pred HHHHHHHHhhh
Confidence 99999877654
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.3e-30 Score=196.69 Aligned_cols=228 Identities=18% Similarity=0.260 Sum_probs=167.2
Q ss_pred cCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHH-HHhhCCCCCCCCCCChHHHHHHHHHHH
Q 039449 5 SRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKE-MAKNYPCFGFAAKMPNIVWWKTCVRDS 83 (253)
Q Consensus 5 ~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (253)
+++|+|+||+||||+++...+...+..+++++|.+.... .....+...... ..... .+..............+...
T Consensus 13 ~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 89 (254)
T 3umg_A 13 RNVRAVLFDTFGTVVDWRTGIATAVADYAARHQLEVDAV-AFADRWRARYQPSMDAIL--SGAREFVTLDILHRENLDFV 89 (254)
T ss_dssp SBCCEEEECCBTTTBCHHHHHHHHHHHHHHHTTCCCCHH-HHHHHHHTTHHHHHHHHH--TTSSCCCCHHHHHHHHHHHH
T ss_pred CCceEEEEeCCCceecCchHHHHHHHHHHHHhcCCCCHH-HHHHHHHHhHHHHHHHHH--hcCCCCCCHHHHHHHHHHHH
Confidence 468999999999999998888899999999999875432 222222111111 11111 11112233445556666677
Q ss_pred HHHcCC---CCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCccee
Q 039449 84 FVRAGY---DYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWD 160 (253)
Q Consensus 84 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~ 160 (253)
++..+. ....+....... .+ ....++|++.++++.|++. ++++++||+....++..++.+|+. |+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~----f~ 157 (254)
T 3umg_A 90 LRESGIDPTNHDSGELDELAR----AW---HVLTPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIP----WD 157 (254)
T ss_dssp HHHTTCCGGGSCHHHHHHHHG----GG---GSCCBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCC----CS
T ss_pred HHHhCCCcCcCCHHHHHHHHH----HH---hhCcCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCC----ee
Confidence 777776 344443332221 11 2247899999999999997 999999999998898899999874 67
Q ss_pred EeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCC---CCCChhhh--hhcCCcc
Q 039449 161 FGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRF---KTPDAKEW--RKSGAIV 235 (253)
Q Consensus 161 ~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~---~~~~~~~~--~~~~~~~ 235 (253)
.+++++..+..||++.+++.+++++| +++++|++|||+. ||+.+|+++|++++++++. +....+.+ ...++++
T Consensus 158 ~~~~~~~~~~~kp~~~~~~~~~~~lg-i~~~~~~~iGD~~-~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~ 235 (254)
T 3umg_A 158 VIIGSDINRKYKPDPQAYLRTAQVLG-LHPGEVMLAAAHN-GDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDIS 235 (254)
T ss_dssp CCCCHHHHTCCTTSHHHHHHHHHHTT-CCGGGEEEEESCH-HHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEE
T ss_pred EEEEcCcCCCCCCCHHHHHHHHHHcC-CChHHEEEEeCCh-HhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceE
Confidence 77778888899999999999999999 9999999999999 9999999999999999842 22222332 3446689
Q ss_pred cCCHHHHHHHHhhh
Q 039449 236 LPDLVAVKEFLTSE 249 (253)
Q Consensus 236 i~~l~el~~~l~~~ 249 (253)
++|+.||.++|...
T Consensus 236 ~~~~~el~~~l~~~ 249 (254)
T 3umg_A 236 ATDITDLAAQLRAG 249 (254)
T ss_dssp ESSHHHHHHHHHHC
T ss_pred ECCHHHHHHHhcCC
Confidence 99999999998753
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-29 Score=192.46 Aligned_cols=219 Identities=22% Similarity=0.247 Sum_probs=156.5
Q ss_pred ceEEEEecCCceeccCCCHHHHHHHHHHHcCCCC--CCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHH
Q 039449 7 LRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPC--PDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSF 84 (253)
Q Consensus 7 ~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (253)
+|+|+||+||||+++...+..++..++++++... .........+..... ...... . ..+...+
T Consensus 2 ~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~~~~~~--------~----~~~~~~~ 66 (241)
T 2hoq_A 2 VKVIFFDLDDTLVDTSKLAEIARKNAIENMIRHGLPVDFETAYSELIELIK---EYGSNF--------P----YHFDYLL 66 (241)
T ss_dssp CCEEEECSBTTTBCHHHHHHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHHH---HHCTTC--------T----THHHHHH
T ss_pred ccEEEEcCCCCCCCChhhHHHHHHHHHHHHHHccccccHHHHHHHHHHhhc---ccchhH--------H----HHHHHHH
Confidence 7899999999999998888888888888764221 122222222211100 000000 0 1133334
Q ss_pred HHc-CCCCCh--HHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeE
Q 039449 85 VRA-GYDYDE--DTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDF 161 (253)
Q Consensus 85 ~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~ 161 (253)
... +..... +.+...+...+... ..++|++.++|+.|++.|++++++||+....++..++.+|+.. +|+.
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~--~f~~ 139 (241)
T 2hoq_A 67 RRLDLPYNPKWISAGVIAYHNTKFAY-----LREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDD--FFEH 139 (241)
T ss_dssp HHTTCCCCHHHHHHHHHHHHHHHHHH-----CCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGG--GCSE
T ss_pred HHhcCCccchHHHHHHHHHHHHHHhh-----CCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHh--hccE
Confidence 443 433211 11222222222211 3678999999999999999999999999888889999999988 9999
Q ss_pred eeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhh--hhcCCcccCCH
Q 039449 162 GVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEW--RKSGAIVLPDL 239 (253)
Q Consensus 162 ~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~--~~~~~~~i~~l 239 (253)
+++++..+..||+++.+..+++++| +++++|++|||+..||+.+|+++|+.++++. ++....... ...++++++++
T Consensus 140 ~~~~~~~~~~Kp~~~~~~~~~~~~g-~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~-~g~~~~~~~~~~~~~~~~i~~~ 217 (241)
T 2hoq_A 140 VIISDFEGVKKPHPKIFKKALKAFN-VKPEEALMVGDRLYSDIYGAKRVGMKTVWFR-YGKHSERELEYRKYADYEIDNL 217 (241)
T ss_dssp EEEGGGGTCCTTCHHHHHHHHHHHT-CCGGGEEEEESCTTTTHHHHHHTTCEEEEEC-CSCCCHHHHTTGGGCSEEESST
T ss_pred EEEeCCCCCCCCCHHHHHHHHHHcC-CCcccEEEECCCchHhHHHHHHCCCEEEEEC-CCCCCcccccccCCCCEEECCH
Confidence 9999999999999999999999999 9999999999997579999999999999996 454444333 12467899999
Q ss_pred HHHHHHHhhh
Q 039449 240 VAVKEFLTSE 249 (253)
Q Consensus 240 ~el~~~l~~~ 249 (253)
.||.+++.+.
T Consensus 218 ~el~~~l~~~ 227 (241)
T 2hoq_A 218 ESLLEVLARE 227 (241)
T ss_dssp THHHHHHHHC
T ss_pred HHHHHHHHHH
Confidence 9999988754
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=191.67 Aligned_cols=222 Identities=20% Similarity=0.285 Sum_probs=154.8
Q ss_pred ceEEEEecCCceeccCCCHHHHHHHHHH---HcCCCCC-CHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHH
Q 039449 7 LRCITVDVTGTLLAYKGELGDYYCMAAK---SVGLPCP-DYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRD 82 (253)
Q Consensus 7 ~k~i~fD~DGTL~~~~~~~~~~~~~~~~---~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (253)
+|+|+||+||||+++...+......+++ ..+.... ...+. +......+....+.. ......+....+..
T Consensus 2 ik~i~fDlDGTL~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 74 (230)
T 3vay_A 2 IKLVTFDLDDTLWDTAPAIVGAEAALRDWLAEQAPKLGPVPVEH---LWEIRSRLLDEDPSF----KHRISALRRRVLFH 74 (230)
T ss_dssp CCEEEECCBTTTBCSHHHHHHHHHHHHHHHHHHCTTTCSCCHHH---HHHHHHHHHHHCGGG----GGCHHHHHHHHHHH
T ss_pred eeEEEecCcccCcCCchHHHHHHHHHHHHHHHhcCcchhhHHHH---HHHHHHHHHHhCccc----cccHHHHHHHHHHH
Confidence 7999999999999988766665544443 3343322 11111 111222222222211 12334445555666
Q ss_pred HHHHcCCCCChHHHHHHHHHHHHHhCC-CCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeE
Q 039449 83 SFVRAGYDYDEDTFEKIFRRIYASFGS-SAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDF 161 (253)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~ 161 (253)
.+...+++ .+............+.. .....++|++.++|+.|++. ++++++||+... ++.+|+.. +|+.
T Consensus 75 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~--~f~~ 144 (230)
T 3vay_A 75 ALEDAGYD--SDEAQQLADESFEVFLHGRHQVQIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLAD--YFAF 144 (230)
T ss_dssp HHHTTTCC--HHHHHHHHHHHHHHHHHHHTCCCBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGG--GCSE
T ss_pred HHHHhCCC--hhhhHHHHHHHHHHHHHhhccCccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHH--Heee
Confidence 67666654 33333222222211110 12357899999999999998 999999999874 67889988 9999
Q ss_pred eeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHH
Q 039449 162 GVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVA 241 (253)
Q Consensus 162 ~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~e 241 (253)
++.++..+..||+++++..+++++| ++++++++|||+..+|+.+|+++|+.++++++.+... +. ...++++++|+.|
T Consensus 145 ~~~~~~~~~~kp~~~~~~~~~~~~~-~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~-~~-~~~~~~~~~~l~e 221 (230)
T 3vay_A 145 ALCAEDLGIGKPDPAPFLEALRRAK-VDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAW-DA-DRLPDAEIHNLSQ 221 (230)
T ss_dssp EEEHHHHTCCTTSHHHHHHHHHHHT-CCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCC-CS-SSCCSEEESSGGG
T ss_pred eEEccccCCCCcCHHHHHHHHHHhC-CCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCC-cc-cCCCCeeECCHHH
Confidence 9999999999999999999999999 9999999999996479999999999999999543332 22 4456799999999
Q ss_pred HHHHHhh
Q 039449 242 VKEFLTS 248 (253)
Q Consensus 242 l~~~l~~ 248 (253)
|.++|.+
T Consensus 222 l~~~l~~ 228 (230)
T 3vay_A 222 LPEVLAR 228 (230)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 9998864
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=190.81 Aligned_cols=220 Identities=15% Similarity=0.190 Sum_probs=157.8
Q ss_pred CccccCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHH
Q 039449 1 MALLSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCV 80 (253)
Q Consensus 1 m~~~~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (253)
|++..++|+|+||+||||+++...+...+..+++++|........+ ....| .+..+. .
T Consensus 3 M~~~~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~--------------~~~~g----~~~~~~----~ 60 (226)
T 1te2_A 3 MSTPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNEL--------------PDTLG----LRIDMV----V 60 (226)
T ss_dssp ----CCCCEEEECCBTTTBCCHHHHHHHHHHHHHHTTCCGGGGGGS--------------CCCTT----CCHHHH----H
T ss_pred CCcCCCCCEEEECCCCCcCcCHHHHHHHHHHHHHHcCCCCChHHHH--------------HHHhC----CCHHHH----H
Confidence 4433358999999999999998888888888999998764311110 01112 122222 2
Q ss_pred HHHHHHcCCC-CChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcce
Q 039449 81 RDSFVRAGYD-YDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEW 159 (253)
Q Consensus 81 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f 159 (253)
...+...+.. .....+...+...+..... ....++|++.++++.+++.|++++++||.....++..++.+|+.. +|
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~--~~ 137 (226)
T 1te2_A 61 DLWYARQPWNGPSRQEVVERVIARAISLVE-ETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRD--SF 137 (226)
T ss_dssp HHHHHHSCCSSSCHHHHHHHHHHHHHHHHH-HHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG--GC
T ss_pred HHHHHHcCCCccCHHHHHHHHHHHHHHHHh-ccCCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHh--hC
Confidence 2223333332 1233333333222221110 113678999999999999999999999999888888999999988 89
Q ss_pred eEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCH
Q 039449 160 DFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDL 239 (253)
Q Consensus 160 ~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l 239 (253)
+.++.+...+..||++.+++.+++.++ ++++++++|||+. ||+.+++.+|++++++++.. +..+.....++++++++
T Consensus 138 ~~~~~~~~~~~~kp~~~~~~~~~~~~~-i~~~~~i~iGD~~-nDi~~a~~aG~~~~~~~~~~-~~~~~~~~~a~~v~~~~ 214 (226)
T 1te2_A 138 DALASAEKLPYSKPHPQVYLDCAAKLG-VDPLTCVALEDSV-NGMIASKAARMRSIVVPAPE-AQNDPRFVLANVKLSSL 214 (226)
T ss_dssp SEEEECTTSSCCTTSTHHHHHHHHHHT-SCGGGEEEEESSH-HHHHHHHHTTCEEEECCCTT-TTTCGGGGGSSEECSCG
T ss_pred cEEEeccccCCCCCChHHHHHHHHHcC-CCHHHeEEEeCCH-HHHHHHHHcCCEEEEEcCCC-CcccccccccCeEECCH
Confidence 998888888889999999999999999 9999999999999 99999999999999999533 32333455677999999
Q ss_pred HHHHHHHhh
Q 039449 240 VAVKEFLTS 248 (253)
Q Consensus 240 ~el~~~l~~ 248 (253)
.|+.+.+..
T Consensus 215 ~el~~~~~~ 223 (226)
T 1te2_A 215 TELTAKDLL 223 (226)
T ss_dssp GGCCHHHHH
T ss_pred HHHhHHHhc
Confidence 998765543
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-29 Score=190.58 Aligned_cols=214 Identities=20% Similarity=0.181 Sum_probs=153.6
Q ss_pred cCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHH
Q 039449 5 SRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSF 84 (253)
Q Consensus 5 ~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (253)
|++|+|+||+||||+++...+...+..+++++|........... ..|. +.... +...+
T Consensus 4 M~~k~v~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~--------------~~g~----~~~~~----~~~~~ 61 (225)
T 3d6j_A 4 MKYTVYLFDFDYTLADSSRGIVTCFRSVLERHGYTGITDDMIKR--------------TIGK----TLEES----FSILT 61 (225)
T ss_dssp -CCSEEEECCBTTTEECHHHHHHHHHHHHHHTTCCCCCHHHHHT--------------TTTS----CHHHH----HHHHH
T ss_pred CCCCEEEEeCCCCCCCCHHHHHHHHHHHHHHhCCCCCCHHHHHH--------------HhCC----cHHHH----HHHHc
Confidence 45899999999999999888888899999999987544333221 1222 11111 11111
Q ss_pred HHcCCCCChHH---HHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeE
Q 039449 85 VRAGYDYDEDT---FEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDF 161 (253)
Q Consensus 85 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~ 161 (253)
+.. .... +...+...+..... ....++|++.++++.+++.|++++++|+.....++..++.+|+.. +|+.
T Consensus 62 ---~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~--~~~~ 134 (225)
T 3d6j_A 62 ---GIT-DADQLESFRQEYSKEADIYMN-ANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDD--WFDI 134 (225)
T ss_dssp ---CCC-CHHHHHHHHHHHHHHHHHHTG-GGCEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTT--CCSE
T ss_pred ---CCC-CHHHHHHHHHHHHHHHHHhcc-ccCccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchh--heee
Confidence 111 2221 12222222222221 124678999999999999999999999999888888999999987 8888
Q ss_pred eeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhc-CCcccCCHH
Q 039449 162 GVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKS-GAIVLPDLV 240 (253)
Q Consensus 162 ~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~-~~~~i~~l~ 240 (253)
++.+...+..||++.++..++++++ ++++++++|||+. ||+.+++.+|++++++.+ +....+.+... .++++++++
T Consensus 135 ~~~~~~~~~~k~~~~~~~~~~~~~~-~~~~~~i~iGD~~-nDi~~~~~aG~~~~~~~~-~~~~~~~l~~~~ad~v~~~~~ 211 (225)
T 3d6j_A 135 IIGGEDVTHHKPDPEGLLLAIDRLK-ACPEEVLYIGDST-VDAGTAAAAGVSFTGVTS-GMTTAQEFQAYPYDRIISTLG 211 (225)
T ss_dssp EECGGGCSSCTTSTHHHHHHHHHTT-CCGGGEEEEESSH-HHHHHHHHHTCEEEEETT-SSCCTTGGGGSCCSEEESSGG
T ss_pred eeehhhcCCCCCChHHHHHHHHHhC-CChHHeEEEcCCH-HHHHHHHHCCCeEEEECC-CCCChHHHhhcCCCEEECCHH
Confidence 8888888888999999999999999 9999999999999 999999999999999985 33333444444 668999999
Q ss_pred HHHHHHhhhh
Q 039449 241 AVKEFLTSEI 250 (253)
Q Consensus 241 el~~~l~~~~ 250 (253)
|+.++|.+..
T Consensus 212 el~~~l~~~~ 221 (225)
T 3d6j_A 212 QLISVPEDKS 221 (225)
T ss_dssp GGC-------
T ss_pred HHHHhhhhhc
Confidence 9999887654
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.7e-30 Score=194.29 Aligned_cols=203 Identities=17% Similarity=0.228 Sum_probs=142.6
Q ss_pred CceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHH
Q 039449 6 RLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFV 85 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (253)
++|+|+||+||||+++...+..++..+++++|.... ...... ..|. +... .+...+.
T Consensus 1 ~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~-~~~~~~--------------~~g~----~~~~----~~~~~~~ 57 (233)
T 3nas_A 1 SLKAVIFDLDGVITDTAEYHFLAWKHIAEQIDIPFD-RDMNER--------------LKGI----SREE----SLESILI 57 (233)
T ss_dssp -CCEEEECSBTTTBCHHHHHHHHHHHHHHHTTCCCC-HHHHHH--------------TTTC----CHHH----HHHHHHH
T ss_pred CCcEEEECCCCCcCCCHHHHHHHHHHHHHHcCCCCC-HHHHHH--------------HcCC----CHHH----HHHHHHH
Confidence 379999999999999988888899999999998743 222211 1222 2222 2444455
Q ss_pred HcCC--CCChHHHHHHH---HHHHHHhC-CCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcce
Q 039449 86 RAGY--DYDEDTFEKIF---RRIYASFG-SSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEW 159 (253)
Q Consensus 86 ~~~~--~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f 159 (253)
..+. ..+.+...... ...+.... ......++||+.++|+.|++.|++++++||+.. +...++.+|+.. +|
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~--~f 133 (233)
T 3nas_A 58 FGGAETKYTNAEKQELMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIID--DF 133 (233)
T ss_dssp HTTCTTTSCHHHHHHHHHHHHHHHHHHHHTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTT--TC
T ss_pred HhCCCCCCCHHHHHHHHHHHHHHHHHHHhhcCcCCcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHh--hc
Confidence 5555 44444443332 23333222 112234799999999999999999999999855 778899999998 99
Q ss_pred eEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCH
Q 039449 160 DFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDL 239 (253)
Q Consensus 160 ~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l 239 (253)
+.++.+...+..||+++++..+++++| +++++|++|||+. ||+.+|+++|+.++++++. +.+. .++++++|+
T Consensus 134 ~~i~~~~~~~~~Kp~~~~~~~~~~~lg-i~~~~~i~vGDs~-~Di~~a~~aG~~~~~~~~~-----~~~~-~ad~v~~s~ 205 (233)
T 3nas_A 134 HAIVDPTTLAKGKPDPDIFLTAAAMLD-VSPADCAAIEDAE-AGISAIKSAGMFAVGVGQG-----QPML-GADLVVRQT 205 (233)
T ss_dssp SEECCC---------CCHHHHHHHHHT-SCGGGEEEEECSH-HHHHHHHHTTCEEEECC-------------CSEECSSG
T ss_pred CEEeeHhhCCCCCCChHHHHHHHHHcC-CCHHHEEEEeCCH-HHHHHHHHcCCEEEEECCc-----cccc-cCCEEeCCh
Confidence 999888888899999999999999999 9999999999999 9999999999999999742 1222 567899999
Q ss_pred HHHH
Q 039449 240 VAVK 243 (253)
Q Consensus 240 ~el~ 243 (253)
.|+.
T Consensus 206 ~el~ 209 (233)
T 3nas_A 206 SDLT 209 (233)
T ss_dssp GGCC
T ss_pred HhCC
Confidence 8864
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-29 Score=192.89 Aligned_cols=125 Identities=18% Similarity=0.190 Sum_probs=107.1
Q ss_pred CCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhc---CCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCC
Q 039449 112 PYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPAL---GVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNI 188 (253)
Q Consensus 112 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~---gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~ 188 (253)
...++||+.++|+.|+++|++++|+||++...++.+++.+ |+.. +|+.++.+ +.+ .||+|+.|..++++++ +
T Consensus 128 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~--~fd~i~~~-~~~-~KP~p~~~~~~~~~lg-~ 202 (261)
T 1yns_A 128 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILE--LVDGHFDT-KIG-HKVESESYRKIADSIG-C 202 (261)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGG--GCSEEECG-GGC-CTTCHHHHHHHHHHHT-S
T ss_pred ccccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHh--hccEEEec-CCC-CCCCHHHHHHHHHHhC-c
Confidence 4588999999999999999999999999998888888754 5887 99998888 788 9999999999999999 9
Q ss_pred CCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHH
Q 039449 189 APEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAV 242 (253)
Q Consensus 189 ~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el 242 (253)
+|++|+||||+. +|+.+|+++|+.+|++.+.+....+.....++++++|+.||
T Consensus 203 ~p~~~l~VgDs~-~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~~l~el 255 (261)
T 1yns_A 203 STNNILFLTDVT-REASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSEL 255 (261)
T ss_dssp CGGGEEEEESCH-HHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGGC
T ss_pred CcccEEEEcCCH-HHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEECCHHHh
Confidence 999999999998 99999999999999998544433222223456789999886
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-28 Score=185.35 Aligned_cols=224 Identities=16% Similarity=0.180 Sum_probs=156.6
Q ss_pred ccC-ceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHH
Q 039449 4 LSR-LRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRD 82 (253)
Q Consensus 4 ~~~-~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (253)
|++ +|+|+||+||||+++...+...+..+++.+.... ....+...+.... .......+. ....+...+...
T Consensus 4 M~~mik~i~fDlDGTL~~~~~~~~~~~~~~~~~l~~~g-~~~~~~~~~~~~~---~~~~~~~~~----~~~~~~~~~~~~ 75 (234)
T 3ddh_A 4 MKELIKVIAFDADDTLWSNEPFFQEVEKQYTDLLKPYG-TSKEISAALFQTE---MNNLQILGY----GAKAFTISMVET 75 (234)
T ss_dssp CTTTCCEEEECCBTTTBCCHHHHHHHHHHHHHHTGGGS-CHHHHHHHHHHHH---HHTHHHHCS----SHHHHHHHHHHH
T ss_pred hhhcccEEEEeCCCCCccCcchHHHHHHHHHHHHHhcC-CHHHHHHHHHHHH---hhhhhhhcC----CcchhHHHHHHH
Confidence 344 8999999999999998877777666655544322 2222222221111 011112222 223333334455
Q ss_pred HHHHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcC-CEEEEEeCCCcchhhhhhhhcCCCCCcceeE
Q 039449 83 SFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKG-LIVGIISNAEYRYQDVILPALGVNQGTEWDF 161 (253)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g-~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~ 161 (253)
.....+...+.+........+..... ....++|++.++++.|++.| ++++++||+....+...++.+|+.. +|+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~--~f~~ 151 (234)
T 3ddh_A 76 ALQISNGKIAADIIRQIVDLGKSLLK--MPIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSP--YFDH 151 (234)
T ss_dssp HHHHTTTCCCHHHHHHHHHHHHHHTT--CCCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGG--GCSE
T ss_pred HHHHhcCCCCHHHHHHHHHHHHHHhh--ccCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHh--hhhe
Confidence 55555656666666655554444332 23578999999999999999 9999999999888889999999988 8887
Q ss_pred eeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcC---CCCCChhhhhhcC-CcccC
Q 039449 162 GVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDR---FKTPDAKEWRKSG-AIVLP 237 (253)
Q Consensus 162 ~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~---~~~~~~~~~~~~~-~~~i~ 237 (253)
++. ..||++++++.+++++| +++++|++|||++.||+.+|+++|++++++.. ++....+. ...+ +++++
T Consensus 152 ~~~-----~~kpk~~~~~~~~~~lg-i~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~-~~~~~d~v~~ 224 (234)
T 3ddh_A 152 IEV-----MSDKTEKEYLRLLSILQ-IAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTET-FAHERLKQVK 224 (234)
T ss_dssp EEE-----ESCCSHHHHHHHHHHHT-CCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---C-CCCTTEEECS
T ss_pred eee-----cCCCCHHHHHHHHHHhC-CCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCccc-ccCCCceecc
Confidence 664 35899999999999999 99999999999943899999999999999962 22222222 2334 68999
Q ss_pred CHHHHHHHH
Q 039449 238 DLVAVKEFL 246 (253)
Q Consensus 238 ~l~el~~~l 246 (253)
|+.||.++|
T Consensus 225 ~l~el~~~l 233 (234)
T 3ddh_A 225 RLDDLLSLL 233 (234)
T ss_dssp SGGGHHHHC
T ss_pred cHHHHHHhc
Confidence 999999876
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.96 E-value=4e-29 Score=189.18 Aligned_cols=217 Identities=15% Similarity=0.195 Sum_probs=157.9
Q ss_pred CceEEEEecCCceeccCCCHHHHHHHHHHH-cCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHH
Q 039449 6 RLRCITVDVTGTLLAYKGELGDYYCMAAKS-VGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSF 84 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (253)
++|+|+||+||||+++...+..++..++++ +|.+.. .... ...|. +.... +...+
T Consensus 3 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~--~~~~--------------~~~g~----~~~~~----~~~~~ 58 (234)
T 2hcf_A 3 SRTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGS--TGSH--------------DFSGK----MDGAI----IYEVL 58 (234)
T ss_dssp CCEEEEECCBTTTEEECTHHHHHHHHHHHHHHSCCCC--C-----------------CCTTC----CHHHH----HHHHH
T ss_pred cceEEEEcCCCCcccCccchHHHHHHHHHHHhCCCCc--cchh--------------hhcCC----ChHHH----HHHHH
Confidence 489999999999999999888889988888 687643 1110 11222 22222 33345
Q ss_pred HHcCCCCC--h---HHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHc-CCEEEEEeCCCcchhhhhhhhcCCCCCcc
Q 039449 85 VRAGYDYD--E---DTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREK-GLIVGIISNAEYRYQDVILPALGVNQGTE 158 (253)
Q Consensus 85 ~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~~gl~~~~~ 158 (253)
...+...+ . ..+...+...+..........++|++.++|+.|++. |++++++||+....++..++.+|+.. +
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~--~ 136 (234)
T 2hcf_A 59 SNVGLERAEIADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDH--Y 136 (234)
T ss_dssp HTTTCCHHHHHHHHHHHHHHHHHHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCST--T
T ss_pred HHcCCCcccchhHHHHHHHHHHHHHHHHhccCCCCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchh--h
Confidence 55555332 1 222233333333322212347889999999999999 99999999999988999999999988 8
Q ss_pred eeEeeeccccC-ccCCCHHHHHHHHHHhCC-CCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhh-cCCcc
Q 039449 159 WDFGVFSGLEG-VEKPDPRIYEIALERAGN-IAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRK-SGAIV 235 (253)
Q Consensus 159 f~~~~~~~~~~-~~kp~~~~~~~~~~~~~~-~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~-~~~~~ 235 (253)
|+.++++.+.. ..||++.+++.+++++|. +++++|++|||+. ||+.+|+++|++++++.+ +......+.. .++++
T Consensus 137 f~~~~~~~~~~~~~k~~~~~~~~~~~~lg~~~~~~~~i~iGD~~-~Di~~a~~aG~~~i~v~~-~~~~~~~~~~~~a~~v 214 (234)
T 2hcf_A 137 FPFGAFADDALDRNELPHIALERARRMTGANYSPSQIVIIGDTE-HDIRCARELDARSIAVAT-GNFTMEELARHKPGTL 214 (234)
T ss_dssp CSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCGGGEEEEESSH-HHHHHHHTTTCEEEEECC-SSSCHHHHHTTCCSEE
T ss_pred cCcceecCCCcCccchHHHHHHHHHHHhCCCCCcccEEEECCCH-HHHHHHHHCCCcEEEEcC-CCCCHHHHHhCCCCEE
Confidence 88766666553 456889999999999973 5899999999999 999999999999999984 4444444333 25689
Q ss_pred cCCHHHHHHHHhhhh
Q 039449 236 LPDLVAVKEFLTSEI 250 (253)
Q Consensus 236 i~~l~el~~~l~~~~ 250 (253)
++|+.||.++|.+..
T Consensus 215 ~~~~~el~~~l~~~~ 229 (234)
T 2hcf_A 215 FKNFAETDEVLASIL 229 (234)
T ss_dssp ESCSCCHHHHHHHHH
T ss_pred eCCHHhHHHHHHHHh
Confidence 999999999987754
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-29 Score=189.21 Aligned_cols=214 Identities=18% Similarity=0.256 Sum_probs=144.7
Q ss_pred CceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCC-C-CCCCCChHHHHHHHHHHH
Q 039449 6 RLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCF-G-FAAKMPNIVWWKTCVRDS 83 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~ 83 (253)
++|+|+||+||||+++...+..++..+++++|.+.. .......+. ......... . ..+... +...
T Consensus 2 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~----~~~g~~~~~~~~~~g~~~--------~~~~ 68 (220)
T 2zg6_A 2 KYKAVLVDFGNTLVGFKPVFYEKVYQVLKDNGYDLD-LRKVFRAYA----KAMGMINYPDEDGLEHVD--------PKDF 68 (220)
T ss_dssp CCCEEEECSBTTTEEEEETTHHHHHHHHHHTTCCCC-HHHHHHHHH----HHGGGCCC-----CCCCC--------HHHH
T ss_pred CceEEEEcCCCceecccccHHHHHHHHHHHhCCCCC-HHHHHHHHH----HHhhhccCCCcccccccc--------HHHH
Confidence 589999999999999999888999999999998643 222222111 110000000 0 001111 2333
Q ss_pred HHHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEee
Q 039449 84 FVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGV 163 (253)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~ 163 (253)
+...+.....+.... +...+.......++||+.++|+.|+++|++++++||+.. .+...++.+|+.. +|+.++
T Consensus 69 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~--~f~~~~ 141 (220)
T 2zg6_A 69 LYILGIYPSERLVKE----LKEADIRDGEAFLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKK--YFDALA 141 (220)
T ss_dssp HHHHTCCCCHHHHHH----HHHTTTTCEEEEECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGG--GCSEEC
T ss_pred HHHcCCCCcHHHHHH----HHHHhhcccCceECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHh--HeeEEE
Confidence 445555433222222 222222222357899999999999999999999999976 4788899999998 999999
Q ss_pred eccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCccc-chhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHH
Q 039449 164 FSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRK-DYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAV 242 (253)
Q Consensus 164 ~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~-Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el 242 (253)
++++.+..||+|+.+..++++++ +++ ++|||+. + |+.+|+++|++++++.+.+.. ..+ +.+++|+.|+
T Consensus 142 ~~~~~~~~Kp~~~~~~~~~~~~~-~~~---~~vgD~~-~~Di~~a~~aG~~~i~v~~~~~~--~~~----~~~i~~l~el 210 (220)
T 2zg6_A 142 LSYEIKAVKPNPKIFGFALAKVG-YPA---VHVGDIY-ELDYIGAKRSYVDPILLDRYDFY--PDV----RDRVKNLREA 210 (220)
T ss_dssp -----------CCHHHHHHHHHC-SSE---EEEESSC-CCCCCCSSSCSEEEEEBCTTSCC--TTC----CSCBSSHHHH
T ss_pred eccccCCCCCCHHHHHHHHHHcC-CCe---EEEcCCc-hHhHHHHHHCCCeEEEECCCCCC--CCc----ceEECCHHHH
Confidence 99999999999999999999999 887 9999999 7 999999999999999854322 111 5689999999
Q ss_pred HHHHhhhh
Q 039449 243 KEFLTSEI 250 (253)
Q Consensus 243 ~~~l~~~~ 250 (253)
.++|.+.+
T Consensus 211 ~~~l~~~~ 218 (220)
T 2zg6_A 211 LQKIEEMN 218 (220)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhc
Confidence 99987654
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-29 Score=188.01 Aligned_cols=196 Identities=18% Similarity=0.254 Sum_probs=144.0
Q ss_pred CccccCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHH
Q 039449 1 MALLSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCV 80 (253)
Q Consensus 1 m~~~~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (253)
|++ +++|+|+||+||||+++...+. .+++++|+.... .....+. . +...
T Consensus 1 M~~-~~~k~iifDlDGTL~d~~~~~~----~~~~~~g~~~~~--~~~~~~~----~-------------~~~~------- 49 (205)
T 3m9l_A 1 MSL-SEIKHWVFDMDGTLTIAVHDFA----AIREALSIPAED--DILTHLA----A-------------LPAD------- 49 (205)
T ss_dssp CCG-GGCCEEEECTBTTTEEEEECHH----HHHHHTTCCTTS--CHHHHHH----H-------------SCHH-------
T ss_pred CCc-ccCCEEEEeCCCcCcccHHHHH----HHHHHhCCCchH--HHHHHHh----c-------------CChH-------
Confidence 553 4689999999999999876543 566778876541 1111100 0 0000
Q ss_pred HHHHHHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcce-
Q 039449 81 RDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEW- 159 (253)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f- 159 (253)
...........+..... ....++|++.++++.|+++|++++++||+....++..++.+|+.. +|
T Consensus 50 -----------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~--~f~ 114 (205)
T 3m9l_A 50 -----------ESAAKHAWLLEHERDLA--QGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLAD--CFA 114 (205)
T ss_dssp -----------HHHHHHHHHHHTHHHHE--EEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG--GSC
T ss_pred -----------HHHHHHHHHHHHHHHHh--hcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchh--hcC
Confidence 00111111122212211 124788999999999999999999999999999999999999988 88
Q ss_pred -eEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCC
Q 039449 160 -DFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPD 238 (253)
Q Consensus 160 -~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~ 238 (253)
+.++.+ +.+..||+++++..+++++| +++++|++|||+. +|+.+|+++|+.+|++.+.. .. ....++++++|
T Consensus 115 ~~~i~~~-~~~~~kp~~~~~~~~~~~~g-~~~~~~i~iGD~~-~Di~~a~~aG~~~i~v~~~~-~~---~~~~ad~v~~~ 187 (205)
T 3m9l_A 115 EADVLGR-DEAPPKPHPGGLLKLAEAWD-VSPSRMVMVGDYR-FDLDCGRAAGTRTVLVNLPD-NP---WPELTDWHARD 187 (205)
T ss_dssp GGGEECT-TTSCCTTSSHHHHHHHHHTT-CCGGGEEEEESSH-HHHHHHHHHTCEEEECSSSS-CS---CGGGCSEECSS
T ss_pred cceEEeC-CCCCCCCCHHHHHHHHHHcC-CCHHHEEEECCCH-HHHHHHHHcCCEEEEEeCCC-Cc---ccccCCEEeCC
Confidence 555544 44888999999999999999 9999999999999 99999999999999998433 22 23457799999
Q ss_pred HHHHHHHHhhh
Q 039449 239 LVAVKEFLTSE 249 (253)
Q Consensus 239 l~el~~~l~~~ 249 (253)
++||...+.+.
T Consensus 188 ~~el~~~~~~~ 198 (205)
T 3m9l_A 188 CAQLRDLLSAE 198 (205)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhc
Confidence 99999998764
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=188.94 Aligned_cols=220 Identities=17% Similarity=0.227 Sum_probs=152.7
Q ss_pred ceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHH---HHHHHhhCCCCCCCCCCChHHHHHHHHHHH
Q 039449 7 LRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLA---YKEMAKNYPCFGFAAKMPNIVWWKTCVRDS 83 (253)
Q Consensus 7 ~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (253)
+|+|+||+||||+++...+..++. .++.. .......+... ....... .+ ............+...
T Consensus 2 ~k~viFDlDGTL~d~~~~~~~~~~----~~~~~---~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~ 69 (253)
T 1qq5_A 2 IKAVVFDAYGTLFDVQSVADATER----AYPGR---GEYITQVWRQKQLEYSWLRAL---MG--RYADFWSVTREALAYT 69 (253)
T ss_dssp CCEEEECTBTTTBCTTTTHHHHHH----HSTTC---HHHHHHHHHHHHHHHHHHHHH---HT--CCCCHHHHHHHHHHHH
T ss_pred CcEEEEeCCCCCCccHhhHHHHHH----HHhhh---hhHHHHHHHHhhhHHHHHHHH---hc--CcCcHHHHHHHHHHHH
Confidence 689999999999999876554443 22211 11111111111 1011100 11 1112223334445555
Q ss_pred HHHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEee
Q 039449 84 FVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGV 163 (253)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~ 163 (253)
+...+.....+.... ....+. ...++|++.++|+.|+ |++++++||+....++..++.+|+.. +|+.++
T Consensus 70 ~~~~~~~~~~~~~~~----~~~~~~---~~~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~--~f~~~~ 138 (253)
T 1qq5_A 70 LGTLGLEPDESFLAD----MAQAYN---RLTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTD--SFDAVI 138 (253)
T ss_dssp HHHTTCCCCHHHHHH----HHGGGG---SCCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGG--GCSEEE
T ss_pred HHHhCCCCCHHHHHH----HHHHHh---cCCCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchh--hccEEE
Confidence 666665544333222 222221 2478899999999999 89999999999999999999999988 999999
Q ss_pred eccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCC----------------------C
Q 039449 164 FSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRF----------------------K 221 (253)
Q Consensus 164 ~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~----------------------~ 221 (253)
.++..+..||+++.+..++++++ +++++|++|||+. +|+.+|+++|+.++++++. +
T Consensus 139 ~~~~~~~~Kp~~~~~~~~~~~~~-~~~~~~~~vGD~~-~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~ 216 (253)
T 1qq5_A 139 SVDAKRVFKPHPDSYALVEEVLG-VTPAEVLFVSSNG-FDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKAL 216 (253)
T ss_dssp EGGGGTCCTTSHHHHHHHHHHHC-CCGGGEEEEESCH-HHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHH
T ss_pred EccccCCCCCCHHHHHHHHHHcC-CCHHHEEEEeCCh-hhHHHHHHCCCEEEEECCcccchhhhhccccccccccccccc
Confidence 99999999999999999999999 9999999999999 9999999999999999850 1
Q ss_pred CCChhhhhhcCCcccCCHHHHHHHHhhhhh
Q 039449 222 TPDAKEWRKSGAIVLPDLVAVKEFLTSEIS 251 (253)
Q Consensus 222 ~~~~~~~~~~~~~~i~~l~el~~~l~~~~~ 251 (253)
....+.....++++++|+.|+.+++.+..+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~el~~~l~~~~~ 246 (253)
T 1qq5_A 217 RMREETYAEAPDFVVPALGDLPRLVRGMAG 246 (253)
T ss_dssp HSSCCTTSCCCSEEESSGGGHHHHHHHHC-
T ss_pred ccccCCCCCCCCeeeCCHHHHHHHHHHhcc
Confidence 111122233466899999999999877543
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-28 Score=183.00 Aligned_cols=204 Identities=20% Similarity=0.185 Sum_probs=152.8
Q ss_pred CceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHH
Q 039449 6 RLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFV 85 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (253)
++|+|+||+||||+++...+...+..+++++|... .....+.... ..+..+.+.. ...
T Consensus 3 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~g-----------------~~~~~~~~~~----~~~ 60 (207)
T 2go7_A 3 QKTAFIWDLDGTLLDSYEAILSGIEETFAQFSIPY-DKEKVREFIF-----------------KYSVQDLLVR----VAE 60 (207)
T ss_dssp -CCEEEECTBTTTEECHHHHHHHHHHHHHHHTCCC-CHHHHHHHHH-----------------HSCHHHHHHH----HHH
T ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCC-CHHHHHHHHc-----------------cccHHHHHHH----hhc
Confidence 47999999999999998888888888999998743 3333222111 0111222221 111
Q ss_pred HcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeec
Q 039449 86 RAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFS 165 (253)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~ 165 (253)
.... + ......+...+..... ....++|++.++++.+++.|++++++|++...... .++.+++.. +|+.++.+
T Consensus 61 ~~~~--~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~--~f~~~~~~ 133 (207)
T 2go7_A 61 DRNL--D-VEVLNQVRAQSLAEKN-AQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVES--YFTEILTS 133 (207)
T ss_dssp HHTC--C-HHHHHHHHHHHHTTCG-GGCEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGG--GEEEEECG
T ss_pred hhhc--c-HHHHHHHHHHHHHhcc-ccceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchh--heeeEEec
Confidence 1221 1 2223333333333221 23478899999999999999999999999998888 899999988 89998888
Q ss_pred cccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHHHHH
Q 039449 166 GLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKEF 245 (253)
Q Consensus 166 ~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~~~ 245 (253)
...+..||+++.+..+++.++ ++++++++|||+. ||+.+++.+|++++++.+ +. . .++++++++.|+.++
T Consensus 134 ~~~~~~Kp~~~~~~~~~~~~~-i~~~~~~~iGD~~-nDi~~~~~aG~~~i~~~~-~~-~------~a~~v~~~~~el~~~ 203 (207)
T 2go7_A 134 QSGFVRKPSPEAATYLLDKYQ-LNSDNTYYIGDRT-LDVEFAQNSGIQSINFLE-ST-Y------EGNHRIQALADISRI 203 (207)
T ss_dssp GGCCCCTTSSHHHHHHHHHHT-CCGGGEEEEESSH-HHHHHHHHHTCEEEESSC-CS-C------TTEEECSSTTHHHHH
T ss_pred CcCCCCCCCcHHHHHHHHHhC-CCcccEEEECCCH-HHHHHHHHCCCeEEEEec-CC-C------CCCEEeCCHHHHHHH
Confidence 888889999999999999999 9999999999998 999999999999999984 32 2 366899999999988
Q ss_pred Hhh
Q 039449 246 LTS 248 (253)
Q Consensus 246 l~~ 248 (253)
|.+
T Consensus 204 l~~ 206 (207)
T 2go7_A 204 FET 206 (207)
T ss_dssp TSC
T ss_pred Hhc
Confidence 753
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.8e-28 Score=184.51 Aligned_cols=223 Identities=13% Similarity=0.089 Sum_probs=150.0
Q ss_pred CceEEEEecCCceeccCCCHHHHHHHHHH---HcCCCC--CCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHH
Q 039449 6 RLRCITVDVTGTLLAYKGELGDYYCMAAK---SVGLPC--PDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCV 80 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~~~~~~~~~~~~~---~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (253)
++|+|+||+||||+++...+..++..+++ +.|+.. .......... ..... ..|. +...++..+.
T Consensus 12 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~---~~~~~----~~g~----~~~~~~~~~~ 80 (251)
T 2pke_A 12 AIQLVGFDGDDTLWKSEDYYRTAEADFEAILSGYLDLGDSRMQQHLLAVE---RRNLK----IFGY----GAKGMTLSMI 80 (251)
T ss_dssp SCCEEEECCBTTTBCCHHHHHHHHHHHHHHHTTTCCC-----CTTHHHHH---HHHHH----HHCS----SHHHHHHHHH
T ss_pred ceeEEEEeCCCCCccCcHhHHHHHHHHHHHHHHhCCchhHHHHHHHHHHH---hhhhh----hccC----cchHHHHHHH
Confidence 57999999999999998888888887774 566654 1111111100 00000 0122 2233333333
Q ss_pred HHHHHHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCccee
Q 039449 81 RDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWD 160 (253)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~ 160 (253)
.......+.....+........+..... ....++|++.++|+.|+ .|++++++||+....+...++.+|+.. +|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~--~f~ 155 (251)
T 2pke_A 81 ETAIELTEARIEARDIQRIVEIGRATLQ--HPVEVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSD--LFP 155 (251)
T ss_dssp HHHHHHTTTCCCHHHHHHHHHHHHHHHT--CCCCBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGG--TCC
T ss_pred HHHHHhcCCCCChHHHHHHHHHHHHHHh--ccCCcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHH--hCc
Confidence 3333444444443333333332222222 23578999999999999 899999999999888888999999987 787
Q ss_pred EeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCCh---hhh-hhcCCc-c
Q 039449 161 FGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDA---KEW-RKSGAI-V 235 (253)
Q Consensus 161 ~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~---~~~-~~~~~~-~ 235 (253)
.+++ ..||+++++..++++++ +++++|++|||+..||+.+|+++|+.+|++.+...... +.+ ...+++ +
T Consensus 156 ~i~~-----~~kp~~~~~~~~~~~l~-~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 229 (251)
T 2pke_A 156 RIEV-----VSEKDPQTYARVLSEFD-LPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLRE 229 (251)
T ss_dssp CEEE-----ESCCSHHHHHHHHHHHT-CCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEE
T ss_pred eeee-----eCCCCHHHHHHHHHHhC-cCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeee
Confidence 7655 36899999999999999 99999999999976799999999999999974221111 112 123456 8
Q ss_pred cCCHHHHHHHHhhhh
Q 039449 236 LPDLVAVKEFLTSEI 250 (253)
Q Consensus 236 i~~l~el~~~l~~~~ 250 (253)
++++.||.++|.+..
T Consensus 230 i~~~~el~~~l~~~~ 244 (251)
T 2pke_A 230 VPDPSGWPAAVRALD 244 (251)
T ss_dssp CSSGGGHHHHHHHHH
T ss_pred eCCHHHHHHHHHHhC
Confidence 999999999887644
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.4e-29 Score=193.38 Aligned_cols=221 Identities=12% Similarity=0.163 Sum_probs=156.9
Q ss_pred cCceEEEEecCCceeccCC-CHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHH----
Q 039449 5 SRLRCITVDVTGTLLAYKG-ELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTC---- 79 (253)
Q Consensus 5 ~~~k~i~fD~DGTL~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 79 (253)
|++|+|+||+||||+++.. .+..++..+++++|+... ...... ..|. ........+
T Consensus 4 m~ik~i~fDlDGTLld~~~~~~~~~~~~~l~~~G~~~~-~~~~~~--------------~~g~----~~~~~~~~~~~~~ 64 (267)
T 1swv_A 4 MKIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAIT-AEEARK--------------PMGL----LKIDHVRALTEMP 64 (267)
T ss_dssp -CCCEEEECSBTTTBSTTCCTTHHHHHHHHHTTTCCCC-HHHHHT--------------TTTS----CHHHHHHHHHHSH
T ss_pred CCceEEEEecCCCEEeCCCccHHHHHHHHHHHcCCCCC-HHHHHH--------------Hhcc----chHHHHHHhcccH
Confidence 3589999999999999988 678899999999988642 222211 1121 111111111
Q ss_pred --HHHHHHHcCCCCChHHHHHHHHH---HHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCC
Q 039449 80 --VRDSFVRAGYDYDEDTFEKIFRR---IYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVN 154 (253)
Q Consensus 80 --~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~ 154 (253)
.......++...+.+........ .+..... ....++|++.++++.|++.|++++++||.....+...++.+|+.
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~ 143 (267)
T 1swv_A 65 RIASEWNRVFRQLPTEADIQEMYEEFEEILFAILP-RYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQ 143 (267)
T ss_dssp HHHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHGG-GGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhhc-cccccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc
Confidence 11112233444444443333322 2222111 12467899999999999999999999999988888888888887
Q ss_pred CCcce-eEeeeccccCccCCCHHHHHHHHHHhCCCCC-CceEEEcCCcccchhhhhhcCCeEEEEcCCCCCC--------
Q 039449 155 QGTEW-DFGVFSGLEGVEKPDPRIYEIALERAGNIAP-EEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPD-------- 224 (253)
Q Consensus 155 ~~~~f-~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~-~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~-------- 224 (253)
. +| +.+++++..+..||++.++..+++++| +++ ++|++|||+. ||+.+++.+|++++++.+ +...
T Consensus 144 ~--~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg-i~~~~~~i~iGD~~-nDi~~a~~aG~~~i~v~~-~~~~~~~~~~~~ 218 (267)
T 1swv_A 144 G--YKPDFLVTPDDVPAGRPYPWMCYKNAMELG-VYPMNHMIKVGDTV-SDMKEGRNAGMWTVGVIL-GSSELGLTEEEV 218 (267)
T ss_dssp T--CCCSCCBCGGGSSCCTTSSHHHHHHHHHHT-CCSGGGEEEEESSH-HHHHHHHHTTSEEEEECT-TCTTTCCCHHHH
T ss_pred c--cChHheecCCccCCCCCCHHHHHHHHHHhC-CCCCcCEEEEeCCH-HHHHHHHHCCCEEEEEcC-CCCccCccHHHH
Confidence 7 64 777777777888999999999999999 999 9999999999 999999999999999994 3221
Q ss_pred ---------------hhhhhhc-CCcccCCHHHHHHHHhhhh
Q 039449 225 ---------------AKEWRKS-GAIVLPDLVAVKEFLTSEI 250 (253)
Q Consensus 225 ---------------~~~~~~~-~~~~i~~l~el~~~l~~~~ 250 (253)
.+.+... ++++++++.||.++|.+..
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~ad~v~~~~~el~~~l~~~~ 260 (267)
T 1swv_A 219 ENMDSVELREKIEVVRNRFVENGAHFTIETMQELESVMEHIE 260 (267)
T ss_dssp HHSCHHHHHHHHHHHHHHHHHTTCSEEESSGGGHHHHHHHHT
T ss_pred hhchhhhhhhhhhhHHHHHHhcCCceeccCHHHHHHHHHHHh
Confidence 2223333 6689999999999887543
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.96 E-value=3.7e-29 Score=188.75 Aligned_cols=213 Identities=15% Similarity=0.165 Sum_probs=155.3
Q ss_pred CceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHH
Q 039449 6 RLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFV 85 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (253)
++|+|+||+||||+++...+...+..+++++|........... + .| .+..++ +.....
T Consensus 3 ~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~-------------~g----~~~~~~----~~~~~~ 60 (229)
T 2fdr_A 3 GFDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGER-F-------------AG----MTWKNI----LLQVES 60 (229)
T ss_dssp CCSEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHH-H-------------TT----CCHHHH----HHHHHH
T ss_pred CccEEEEcCCCCcCccHHHHHHHHHHHHHHhCCCCCHHHHHHH-H-------------hC----CCHHHH----HHHHHH
Confidence 4799999999999999888888888999999886432211111 0 11 122333 333344
Q ss_pred HcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcce-eEeee
Q 039449 86 RAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEW-DFGVF 164 (253)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f-~~~~~ 164 (253)
..+..............+..... ....++|++.++++.++. +++++||+....+...++.+|+.. +| +.+++
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~--~~~~~~~~ 133 (229)
T 2fdr_A 61 EASIPLSASLLDKSEKLLDMRLE--RDVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKP--YFAPHIYS 133 (229)
T ss_dssp HHCCCCCTHHHHHHHHHHHHHHH--HHCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGG--GTTTCEEE
T ss_pred HcCCCCCHHHHHHHHHHHHHHhh--cCCccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHH--hccceEEe
Confidence 45544333332222221111111 113678999999988874 899999999988888999999987 88 88788
Q ss_pred ccccCcc--CCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCC---Chhhhhhc-CCcccCC
Q 039449 165 SGLEGVE--KPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTP---DAKEWRKS-GAIVLPD 238 (253)
Q Consensus 165 ~~~~~~~--kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~---~~~~~~~~-~~~~i~~ 238 (253)
++..+.. ||++.++..+++++| ++++++++|||+. ||+.+|+.+|+.++++++.... ..+.+... +++++++
T Consensus 134 ~~~~~~~~~kpk~~~~~~~~~~l~-~~~~~~i~iGD~~-~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~ 211 (229)
T 2fdr_A 134 AKDLGADRVKPKPDIFLHGAAQFG-VSPDRVVVVEDSV-HGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISR 211 (229)
T ss_dssp HHHHCTTCCTTSSHHHHHHHHHHT-CCGGGEEEEESSH-HHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESC
T ss_pred ccccccCCCCcCHHHHHHHHHHcC-CChhHeEEEcCCH-HHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecC
Confidence 8888888 999999999999999 9999999999999 9999999999999999853321 12334444 6789999
Q ss_pred HHHHHHHHhhh
Q 039449 239 LVAVKEFLTSE 249 (253)
Q Consensus 239 l~el~~~l~~~ 249 (253)
+.|+.++|.+.
T Consensus 212 ~~el~~~l~~~ 222 (229)
T 2fdr_A 212 MQDLPAVIAAM 222 (229)
T ss_dssp GGGHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999988764
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.3e-29 Score=193.90 Aligned_cols=214 Identities=18% Similarity=0.214 Sum_probs=147.9
Q ss_pred cCceEEEEecCCceeccCCCHHHHHHHHHHHc-----CCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHH
Q 039449 5 SRLRCITVDVTGTLLAYKGELGDYYCMAAKSV-----GLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTC 79 (253)
Q Consensus 5 ~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~-----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (253)
.++|+|+||+||||+++...+...+..++.++ |+...........+...+ | ..
T Consensus 55 ~~~k~i~FDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------g------------~~ 112 (282)
T 3nuq_A 55 PNLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEY----------G------------LA 112 (282)
T ss_dssp CCCCEEEECCTTTTSCCCHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHT----------H------------HH
T ss_pred CCCCEEEEecCCCcccCCccHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH----------h------------hh
Confidence 35799999999999998877777777666653 443222111111110000 0 00
Q ss_pred HHHHHHHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCC--EEEEEeCCCcchhhhhhhhcCCCCCc
Q 039449 80 VRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGL--IVGIISNAEYRYQDVILPALGVNQGT 157 (253)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~--~~~i~s~~~~~~~~~~l~~~gl~~~~ 157 (253)
+...+...++ +.+.+...+..... ......++|++.++|+.|++.|+ +++++||+....+...++.+|+..
T Consensus 113 ~~~~~~~~~~--~~~~~~~~~~~~~~---~~~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~-- 185 (282)
T 3nuq_A 113 IRGLVMFHKV--NALEYNRLVDDSLP---LQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIAD-- 185 (282)
T ss_dssp HHHHHHTTSS--CHHHHHHHHTTTSC---GGGTCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTT--
T ss_pred HHHHHHHcCC--CHHHHHHHHhhhhh---hhhccCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCccc--
Confidence 2233333333 33333332222110 01224788999999999999999 999999999999999999999998
Q ss_pred ceeEeeecccc----CccCCCHHHHHHHHHHhCCCCC-CceEEEcCCcccchhhhhhcCCe-EEEEcCCCCCChhhhhhc
Q 039449 158 EWDFGVFSGLE----GVEKPDPRIYEIALERAGNIAP-EEALHIGDSFRKDYVPAKSVGMH-ALLVDRFKTPDAKEWRKS 231 (253)
Q Consensus 158 ~f~~~~~~~~~----~~~kp~~~~~~~~~~~~~~~~~-~~~~~iGD~~~~Di~~a~~~G~~-~i~~~~~~~~~~~~~~~~ 231 (253)
+|+.+++++.. ...||+++++..+++++| +++ ++|++|||+. +|+.+|+++|++ ++++.+............
T Consensus 186 ~fd~v~~~~~~~~~~~~~Kp~~~~~~~~~~~lg-i~~~~~~i~vGD~~-~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ 263 (282)
T 3nuq_A 186 LFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESG-LARYENAYFIDDSG-KNIETGIKLGMKTCIHLVENEVNEILGQTPE 263 (282)
T ss_dssp SCSEEECCCCSSCSSCCCTTSHHHHHHHHHHHT-CCCGGGEEEEESCH-HHHHHHHHHTCSEEEEECSCCC----CCCCT
T ss_pred ccceEEEeccCCCcccCCCcCHHHHHHHHHHcC-CCCcccEEEEcCCH-HHHHHHHHCCCeEEEEEcCCccccccccCCC
Confidence 99998877655 456999999999999999 998 9999999999 999999999995 455553222211111234
Q ss_pred CCcccCCHHHHHHHHhhh
Q 039449 232 GAIVLPDLVAVKEFLTSE 249 (253)
Q Consensus 232 ~~~~i~~l~el~~~l~~~ 249 (253)
++++++|+.||.++|.+.
T Consensus 264 ad~vi~sl~el~~~l~~l 281 (282)
T 3nuq_A 264 GAIVISDILELPHVVSDL 281 (282)
T ss_dssp TCEEESSGGGGGGTSGGG
T ss_pred CCEEeCCHHHHHHHhhhh
Confidence 568999999999988765
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-28 Score=184.52 Aligned_cols=202 Identities=17% Similarity=0.235 Sum_probs=150.8
Q ss_pred ceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHHH
Q 039449 7 LRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFVR 86 (253)
Q Consensus 7 ~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (253)
+|+|+||+||||+++...+...+..+++++|......... ....|. +.... +...+..
T Consensus 2 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~--------------~~~~g~----~~~~~----~~~~~~~ 59 (221)
T 2wf7_A 2 FKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFN--------------EQLKGV----SREDS----LQKILDL 59 (221)
T ss_dssp CCEEEECCBTTTBTHHHHHHHHHHHHHHHTTCCCCSHHHH--------------TTTTTC----CHHHH----HHHHHHH
T ss_pred CcEEEECCCCcccCChHHHHHHHHHHHHHcCCCCCCHHHH--------------HHhCCC----CHHHH----HHHHHHH
Confidence 7999999999999998888888899999998762221111 111222 22222 3334455
Q ss_pred cCCCCChHHHHHH---HHHHHHHhCC-CCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEe
Q 039449 87 AGYDYDEDTFEKI---FRRIYASFGS-SAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFG 162 (253)
Q Consensus 87 ~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~ 162 (253)
.+...+.+..... +...+..... .....++|++.++++.+++.|++++++|+. ......++.+|+.. +|+.+
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~--~f~~~ 135 (221)
T 2wf7_A 60 ADKKVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTG--YFDAI 135 (221)
T ss_dssp TTCCCCHHHHHHHHHHHHHHHHHHGGGCCGGGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGG--GCSEE
T ss_pred hCCCCChHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHH--HcceE
Confidence 5544444443332 2223332221 113467899999999999999999999998 45677888899988 89998
Q ss_pred eeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHH
Q 039449 163 VFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAV 242 (253)
Q Consensus 163 ~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el 242 (253)
+.++..+..||+|+++..+++++| +++++|++|||+. ||+.+|+.+|+.+++++. .+.+. .+++++++++|+
T Consensus 136 ~~~~~~~~~Kp~~~~~~~~~~~lg-i~~~~~i~iGD~~-nDi~~a~~aG~~~~~~~~-----~~~~~-~a~~v~~~~~el 207 (221)
T 2wf7_A 136 ADPAEVAASKPAPDIFIAAAHAVG-VAPSESIGLEDSQ-AGIQAIKDSGALPIGVGR-----PEDLG-DDIVIVPDTSHY 207 (221)
T ss_dssp CCTTTSSSCTTSSHHHHHHHHHTT-CCGGGEEEEESSH-HHHHHHHHHTCEEEEESC-----HHHHC-SSSEEESSGGGC
T ss_pred eccccCCCCCCChHHHHHHHHHcC-CChhHeEEEeCCH-HHHHHHHHCCCEEEEECC-----HHHhc-cccchhcCHHhC
Confidence 888888999999999999999999 9999999999999 999999999999999963 23444 567899999986
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=99.95 E-value=3.2e-27 Score=174.81 Aligned_cols=128 Identities=20% Similarity=0.246 Sum_probs=112.1
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCc
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEE 192 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 192 (253)
..++||+.+ |+.|+++ ++++++||+....++..++.+|+.. +|+.++.++..+..||+++++..++++++ +++
T Consensus 73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~--~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~---~~~ 145 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLR--YFKGIFSAESVKEYKPSPKVYKYFLDSIG---AKE 145 (201)
T ss_dssp CEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGG--GCSEEEEGGGGTCCTTCHHHHHHHHHHHT---CSC
T ss_pred cccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHH--hCcEEEehhhcCCCCCCHHHHHHHHHhcC---CCc
Confidence 478999999 9999999 9999999999888899999999988 99998888888899999999999999997 899
Q ss_pred eEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHHHHHHhhh
Q 039449 193 ALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKEFLTSE 249 (253)
Q Consensus 193 ~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~~~l~~~ 249 (253)
+++|||+. +|+.+|+++|++++++++.+.. .+.+...++++++++.|+.++|.+.
T Consensus 146 ~~~vGD~~-~Di~~a~~aG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~el~~~l~~~ 200 (201)
T 2w43_A 146 AFLVSSNA-FDVIGAKNAGMRSIFVNRKNTI-VDPIGGKPDVIVNDFKELYEWILRY 200 (201)
T ss_dssp CEEEESCH-HHHHHHHHTTCEEEEECSSSCC-CCTTSCCCSEEESSHHHHHHHHHHH
T ss_pred EEEEeCCH-HHhHHHHHCCCEEEEECCCCCC-ccccCCCCCEEECCHHHHHHHHHhc
Confidence 99999999 8999999999999999953322 2233344668999999999988653
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-27 Score=180.51 Aligned_cols=184 Identities=17% Similarity=0.218 Sum_probs=137.9
Q ss_pred CceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHH--HHHHHHhhCCCCCCCCCCChHHHHHHHHHHH
Q 039449 6 RLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKL--AYKEMAKNYPCFGFAAKMPNIVWWKTCVRDS 83 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (253)
++|+|+||+||||+++. ...+...++++|++. .......+.. .+..+ ..+.++..+++.. .
T Consensus 27 ~ik~viFD~DGTL~d~~---~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~--------~~g~~~~~~~~~~----~ 89 (229)
T 4dcc_A 27 GIKNLLIDLGGVLINLD---RERCIENFKKIGFQN--IEEKFCTHQLDGIFLQQ--------EKGLITPAEFRDG----I 89 (229)
T ss_dssp CCCEEEECSBTTTBCBC---HHHHHHHHHHHTCTT--HHHHHHHTHHHHHHHHH--------HTTCSCHHHHHHH----H
T ss_pred CCCEEEEeCCCeEEeCC---hHHHHHHHHHhCCCc--HHHHHHHhcCcHHHHHH--------HCCCCCHHHHHHH----H
Confidence 48999999999999976 466677888888762 2222222111 11111 1123444444443 2
Q ss_pred HHHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhh---h---hhcCCCCCc
Q 039449 84 FVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVI---L---PALGVNQGT 157 (253)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~---l---~~~gl~~~~ 157 (253)
.+..+...+.+.+...+.. .. ..++|++.++|+.|++. ++++++||+....+..+ + +.+|+..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~----~~----~~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~-- 158 (229)
T 4dcc_A 90 REMMGKMVSDKQIDAAWNS----FL----VDIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVED-- 158 (229)
T ss_dssp HHHHTSCCCHHHHHHHHHT----TB----CCCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHH--
T ss_pred HHHhCCCCCHHHHHHHHHH----HH----HhccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHH--
Confidence 4445666566655544432 22 14678999999999998 99999999999887744 4 7788887
Q ss_pred ceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcC
Q 039449 158 EWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDR 219 (253)
Q Consensus 158 ~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~ 219 (253)
+|+.++.+...+..||+|++|+.+++++| +++++|++|||+. +|+.+|+++|+.+|++++
T Consensus 159 ~fd~i~~~~~~~~~KP~~~~~~~~~~~~g-~~~~~~~~vGD~~-~Di~~a~~aG~~~i~v~~ 218 (229)
T 4dcc_A 159 YFEKTYLSYEMKMAKPEPEIFKAVTEDAG-IDPKETFFIDDSE-INCKVAQELGISTYTPKA 218 (229)
T ss_dssp HCSEEEEHHHHTCCTTCHHHHHHHHHHHT-CCGGGEEEECSCH-HHHHHHHHTTCEEECCCT
T ss_pred hCCEEEeecccCCCCCCHHHHHHHHHHcC-CCHHHeEEECCCH-HHHHHHHHcCCEEEEECC
Confidence 99999999999999999999999999999 9999999999999 999999999999999984
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-27 Score=185.36 Aligned_cols=203 Identities=12% Similarity=0.128 Sum_probs=144.7
Q ss_pred CceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHH
Q 039449 6 RLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFV 85 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (253)
++|+|+||+||||+++...+...+..+++++|. ......... ..|. +..+. +.....
T Consensus 34 ~ik~iifDlDGTLlds~~~~~~~~~~~~~~~g~--~~~~~~~~~-------------~~G~----~~~~~----~~~~~~ 90 (275)
T 2qlt_A 34 KINAALFDVDGTIIISQPAIAAFWRDFGKDKPY--FDAEHVIHI-------------SHGW----RTYDA----IAKFAP 90 (275)
T ss_dssp EESEEEECCBTTTEECHHHHHHHHHHHHTTCTT--CCHHHHHHH-------------CTTC----CHHHH----HHHHCG
T ss_pred cCCEEEECCCCCCCCCHHHHHHHHHHHHHHcCC--CCHHHHHHH-------------hcCC----CHHHH----HHHHhc
Confidence 479999999999999988888888888888873 122211110 1122 11111 111111
Q ss_pred HcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHc-CCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeee
Q 039449 86 RAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREK-GLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVF 164 (253)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~ 164 (253)
.. ...+........+..... ....++|++.++|+.|++. |++++++||+....++..++.+|+. .|+.+++
T Consensus 91 ~~---~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~---~f~~i~~ 162 (275)
T 2qlt_A 91 DF---ADEEYVNKLEGEIPEKYG--EHSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK---RPEYFIT 162 (275)
T ss_dssp GG---CCHHHHHHHHHTHHHHHC--TTCEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC---CCSSEEC
T ss_pred cC---CcHHHHHHHHHHHHHHHh--cCCCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC---ccCEEEE
Confidence 11 122222222222222222 2347889999999999999 9999999999998888899999886 3677777
Q ss_pred ccccCccCCCHHHHHHHHHHhCCC-------CCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhh-cCCccc
Q 039449 165 SGLEGVEKPDPRIYEIALERAGNI-------APEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRK-SGAIVL 236 (253)
Q Consensus 165 ~~~~~~~kp~~~~~~~~~~~~~~~-------~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~-~~~~~i 236 (253)
++.....||+++++..++++++ + ++++|++|||+. ||+.+|+++|+.++++.+ +.. ...+.. .+++++
T Consensus 163 ~~~~~~~kp~~~~~~~~~~~lg-i~~~~~~~~~~~~i~~GDs~-nDi~~a~~AG~~~i~v~~-~~~-~~~~~~~~ad~v~ 238 (275)
T 2qlt_A 163 ANDVKQGKPHPEPYLKGRNGLG-FPINEQDPSKSKVVVFEDAP-AGIAAGKAAGCKIVGIAT-TFD-LDFLKEKGCDIIV 238 (275)
T ss_dssp GGGCSSCTTSSHHHHHHHHHTT-CCCCSSCGGGSCEEEEESSH-HHHHHHHHTTCEEEEESS-SSC-HHHHTTSSCSEEE
T ss_pred cccCCCCCCChHHHHHHHHHcC-CCccccCCCcceEEEEeCCH-HHHHHHHHcCCEEEEECC-CCC-HHHHhhCCCCEEE
Confidence 7778888999999999999999 9 999999999999 999999999999999984 333 333333 366899
Q ss_pred CCHHHHH
Q 039449 237 PDLVAVK 243 (253)
Q Consensus 237 ~~l~el~ 243 (253)
++++|+.
T Consensus 239 ~~~~el~ 245 (275)
T 2qlt_A 239 KNHESIR 245 (275)
T ss_dssp SSGGGEE
T ss_pred CChHHcC
Confidence 9998864
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-27 Score=177.15 Aligned_cols=184 Identities=21% Similarity=0.275 Sum_probs=134.0
Q ss_pred CceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHH
Q 039449 6 RLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFV 85 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (253)
++|+|+||+||||+++.. ....+..+++++|.+............ .... .+.++..+++ .....
T Consensus 3 ~~k~viFDlDGTL~d~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~--------~~~~~~~~~~----~~~~~ 66 (200)
T 3cnh_A 3 TIKALFWDIGGVLLTNGW-DREQRADVAQRFGLDTDDFTERHRLAA---PELE--------LGRMTLAEYL----EQVVF 66 (200)
T ss_dssp CCCEEEECCBTTTBCCSS-CHHHHHHHHHHHTCCHHHHHHHHHHHH---HHHH--------TTSSCHHHHH----HHHTT
T ss_pred CceEEEEeCCCeeECCCc-chHHHHHHHHHcCCCHHHHHHHHHhhc---hHHH--------cCCcCHHHHH----HHHHH
Confidence 589999999999999875 457788888888875422222111111 1110 1112222222 22222
Q ss_pred HcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeec
Q 039449 86 RAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFS 165 (253)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~ 165 (253)
..+.....+ .+.+.+... ..++|++.++|+.|+++| +++++||++...+...++.+|+.. +|+.++.+
T Consensus 67 ~~~~~~~~~----~~~~~~~~~-----~~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~--~f~~~~~~ 134 (200)
T 3cnh_A 67 YQPRDFTPE----DFRAVMEEQ-----SQPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGE--FLLAFFTS 134 (200)
T ss_dssp TSCCSSCHH----HHHHHHHHT-----CCBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGG--TCSCEEEH
T ss_pred HcCCCCCHH----HHHHHHHhc-----CccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHH--hcceEEee
Confidence 222122222 222222211 258899999999999999 999999999998999999999988 89998888
Q ss_pred cccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcC
Q 039449 166 GLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDR 219 (253)
Q Consensus 166 ~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~ 219 (253)
...+..||+++.+..++++++ +++++|++|||+. +|+.+|+++|+.++++++
T Consensus 135 ~~~~~~Kp~~~~~~~~~~~~~-~~~~~~~~vgD~~-~Di~~a~~aG~~~~~~~~ 186 (200)
T 3cnh_A 135 SALGVMKPNPAMYRLGLTLAQ-VRPEEAVMVDDRL-QNVQAARAVGMHAVQCVD 186 (200)
T ss_dssp HHHSCCTTCHHHHHHHHHHHT-CCGGGEEEEESCH-HHHHHHHHTTCEEEECSC
T ss_pred cccCCCCCCHHHHHHHHHHcC-CCHHHeEEeCCCH-HHHHHHHHCCCEEEEECC
Confidence 888999999999999999999 9999999999999 999999999999999984
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-26 Score=169.57 Aligned_cols=180 Identities=18% Similarity=0.113 Sum_probs=132.0
Q ss_pred CccccCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHH
Q 039449 1 MALLSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCV 80 (253)
Q Consensus 1 m~~~~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (253)
|++ |++|+|+||+||||+++...+...+..+++++|.... .......+... . .
T Consensus 1 M~~-M~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~-----------------~--------~ 53 (190)
T 2fi1_A 1 MKG-MKYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQD-HDSVYQALKVS-----------------T--------P 53 (190)
T ss_dssp ----CCCSEEEECTBTTTBCHHHHHHHHHHHHHHHTTCCCC-HHHHHHHHHHC-----------------H--------H
T ss_pred CCC-CcccEEEEeCCCCcCCCHHHHHHHHHHHHHHhCCCCC-HHHHHHHHccc-----------------c--------H
Confidence 444 3589999999999999888888889999999988643 22222211100 0 1
Q ss_pred HHHHHHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCccee
Q 039449 81 RDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWD 160 (253)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~ 160 (253)
.......+.. ..+...+...+...... . .++|++.++++.|+++|++++++||... .++..++.+|+.. +|+
T Consensus 54 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~-~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~--~f~ 125 (190)
T 2fi1_A 54 FAIETFAPNL---ENFLEKYKENEARELEH-P-ILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAA--YFT 125 (190)
T ss_dssp HHHHHHCTTC---TTHHHHHHHHHHHHTTS-C-CBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGG--GEE
T ss_pred HHHHHHhhhH---HHHHHHHHHHHHHhcCc-C-ccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHh--hee
Confidence 1111111111 11122223333333222 2 3889999999999999999999999864 6778889999988 899
Q ss_pred EeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcC
Q 039449 161 FGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDR 219 (253)
Q Consensus 161 ~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~ 219 (253)
.++.+...+..||+++.+..++++++ ++ +|++|||+. ||+.+|+.+|++++++++
T Consensus 126 ~~~~~~~~~~~kp~~~~~~~~~~~~~-~~--~~~~iGD~~-~Di~~a~~aG~~~~~~~~ 180 (190)
T 2fi1_A 126 EVVTSSSGFKRKPNPESMLYLREKYQ-IS--SGLVIGDRP-IDIEAGQAAGLDTHLFTS 180 (190)
T ss_dssp EEECGGGCCCCTTSCHHHHHHHHHTT-CS--SEEEEESSH-HHHHHHHHTTCEEEECSC
T ss_pred eeeeccccCCCCCCHHHHHHHHHHcC-CC--eEEEEcCCH-HHHHHHHHcCCeEEEECC
Confidence 98888888889999999999999999 88 999999999 999999999999999984
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.8e-27 Score=172.64 Aligned_cols=131 Identities=25% Similarity=0.378 Sum_probs=112.5
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCc---chhhhhhhhcCCCCCcceeEeeecccc----CccCCCHHHHHHHHHHh
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEY---RYQDVILPALGVNQGTEWDFGVFSGLE----GVEKPDPRIYEIALERA 185 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~---~~~~~~l~~~gl~~~~~f~~~~~~~~~----~~~kp~~~~~~~~~~~~ 185 (253)
..++||+.++|+.|+++|++++++||+.. ..+...++.+|+.. +|+.++++.+. +..||+|+.|..+++++
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~--~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~ 110 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIID--YFDFIYASNSELQPGKMEKPDKTIFDFTLNAL 110 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGG--GEEEEEECCTTSSTTCCCTTSHHHHHHHHHHH
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchh--heEEEEEccccccccCCCCcCHHHHHHHHHHc
Confidence 47899999999999999999999999987 77889999999998 99999888876 77899999999999999
Q ss_pred CCCCCCceEEEcCC-cccchhhhhhcCCeEEEEcCCCCC-Chhhhhh-cCCcccC--CHHHHHHHHh
Q 039449 186 GNIAPEEALHIGDS-FRKDYVPAKSVGMHALLVDRFKTP-DAKEWRK-SGAIVLP--DLVAVKEFLT 247 (253)
Q Consensus 186 ~~~~~~~~~~iGD~-~~~Di~~a~~~G~~~i~~~~~~~~-~~~~~~~-~~~~~i~--~l~el~~~l~ 247 (253)
+ +++++|++|||+ . +|+.+|+++|+.++++.+.... ..+.+.. .++++++ ++.+|.++|.
T Consensus 111 ~-~~~~~~l~VGD~~~-~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~ 175 (189)
T 3ib6_A 111 Q-IDKTEAVMVGNTFE-SDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALL 175 (189)
T ss_dssp T-CCGGGEEEEESBTT-TTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHH
T ss_pred C-CCcccEEEECCCcH-HHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHHH
Confidence 9 999999999999 7 8999999999999999854332 1222222 4567888 8888877764
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=2e-27 Score=176.46 Aligned_cols=191 Identities=15% Similarity=0.162 Sum_probs=130.6
Q ss_pred CccccCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHH-HHHHHHHhhCCCCCCCCCCChHHHHHHH
Q 039449 1 MALLSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFK-LAYKEMAKNYPCFGFAAKMPNIVWWKTC 79 (253)
Q Consensus 1 m~~~~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (253)
|+.++++|+|+||+||||+++.. ..+...+.+.|.... ......+. ....... ..+.++..+++..
T Consensus 1 M~~~~~~k~viFDlDGTL~d~~~---~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-------~~g~~~~~~~~~~- 67 (206)
T 2b0c_A 1 MARKEAKMLYIFDLGNVIVDIDF---NRVLGAWSDLTRIPL--ASLKKSFHMGEAFHQH-------ERGEISDEAFAEA- 67 (206)
T ss_dssp -----CCCEEEECCBTTTEEEET---HHHHHHHHHHHCCCH--HHHHHHCCCCHHHHHH-------HTTCSCHHHHHHH-
T ss_pred CCccccccEEEEcCCCeeecCcH---HHHHHHHHHhcCCCH--HHHHHHHhcccHHHHH-------hcCCCCHHHHHHH-
Confidence 66667799999999999999873 334455556554321 11111100 0000000 0112233333322
Q ss_pred HHHHHHHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhh-cCCCCCcc
Q 039449 80 VRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPA-LGVNQGTE 158 (253)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~gl~~~~~ 158 (253)
.....+...+.+++...+ .. ....++|++.++|+.|+++|++++++||+....+...++. +|+.. +
T Consensus 68 ---~~~~~~~~~~~~~~~~~~----~~----~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~--~ 134 (206)
T 2b0c_A 68 ---LCHEMALPLSYEQFSHGW----QA----VFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRD--A 134 (206)
T ss_dssp ---HHHHHTCCCCHHHHHHHH----HT----CEEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHH--H
T ss_pred ---HHHHhCCCCCHHHHHHHH----HH----HhcccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhh--h
Confidence 233444433433322221 11 1237889999999999999999999999998887777777 78877 8
Q ss_pred eeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcC
Q 039449 159 WDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDR 219 (253)
Q Consensus 159 f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~ 219 (253)
|+.++.+...+..||+++.+..++++++ ++++++++|||+. +|+.+|+++|++++++++
T Consensus 135 f~~~~~~~~~~~~Kp~~~~~~~~~~~~~-~~~~~~~~vgD~~-~Di~~a~~aG~~~~~~~~ 193 (206)
T 2b0c_A 135 ADHIYLSQDLGMRKPEARIYQHVLQAEG-FSPSDTVFFDDNA-DNIEGANQLGITSILVKD 193 (206)
T ss_dssp CSEEEEHHHHTCCTTCHHHHHHHHHHHT-CCGGGEEEEESCH-HHHHHHHTTTCEEEECCS
T ss_pred eeeEEEecccCCCCCCHHHHHHHHHHcC-CCHHHeEEeCCCH-HHHHHHHHcCCeEEEecC
Confidence 9998888888999999999999999999 9999999999999 899999999999999984
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.4e-28 Score=183.98 Aligned_cols=212 Identities=14% Similarity=0.153 Sum_probs=141.9
Q ss_pred cCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHH
Q 039449 5 SRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSF 84 (253)
Q Consensus 5 ~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (253)
.++|+|+||+||||+|+...+..++..+++++|.+.. .. +.......... .|.. ..... +....
T Consensus 9 ~~~k~viFDlDGTL~ds~~~~~~~~~~~~~~~g~~~~--~~----~~~~~~~~~~~---~g~~---~~~~~----~~~~~ 72 (231)
T 2p11_A 9 PHDIVFLFDCDNTLLDNDHVLADLRAHMMREFGAQNS--AR----YWEIFETLRTE---LGYA---DYLGA----LQRYR 72 (231)
T ss_dssp CCSEEEEECCBTTTBCHHHHHHHHHHHHHHHHCHHHH--HH----HHHHHHHHHHH---C-CC---CHHHH----HHHHH
T ss_pred CCCeEEEEcCCCCCEecHHHHHHHHHHHHHHcCCCcc--hH----HHHHHHHHHHh---cCch---HHHHH----HHHHH
Confidence 4578999999999999998888889999999885421 11 11111111111 2221 11111 22222
Q ss_pred HHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeee
Q 039449 85 VRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVF 164 (253)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~ 164 (253)
.........+. +..++.... ....++||+.++|+.|+++| +++|+||+....++..++.+|+.. +|+.+..
T Consensus 73 ~~~~~~~~~~~----~~~~~~~~~--~~~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~--~f~~~~~ 143 (231)
T 2p11_A 73 LEQPRDTRLLL----MSSFLIDYP--FASRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWD--EVEGRVL 143 (231)
T ss_dssp HHCTTCTGGGG----GHHHHHHCC--GGGGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHH--HTTTCEE
T ss_pred hccccchHHHH----HHHHHHHHH--HhCCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHH--hcCeeEE
Confidence 22111111122 222333222 23578999999999999999 999999999999999999999987 6655433
Q ss_pred ccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCccc---chhhhhhcCCeEEEEcCCCC-CChhhhhhc--CCcccCC
Q 039449 165 SGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRK---DYVPAKSVGMHALLVDRFKT-PDAKEWRKS--GAIVLPD 238 (253)
Q Consensus 165 ~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~---Di~~a~~~G~~~i~~~~~~~-~~~~~~~~~--~~~~i~~ 238 (253)
..++|+..++.+++ + +++++|++|||+. + |+.+|+++|++++++.+... ...+.+... +++++++
T Consensus 144 -----~~~~K~~~~~~~~~--~-~~~~~~~~vgDs~-~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~~ 214 (231)
T 2p11_A 144 -----IYIHKELMLDQVME--C-YPARHYVMVDDKL-RILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVER 214 (231)
T ss_dssp -----EESSGGGCHHHHHH--H-SCCSEEEEECSCH-HHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEESS
T ss_pred -----ecCChHHHHHHHHh--c-CCCceEEEEcCcc-chhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeecC
Confidence 12344677777776 7 8999999999999 8 99999999999999984212 233344443 6689999
Q ss_pred HHHHHHHHhhhh
Q 039449 239 LVAVKEFLTSEI 250 (253)
Q Consensus 239 l~el~~~l~~~~ 250 (253)
+.||.+++.+.+
T Consensus 215 ~~el~~~l~~~~ 226 (231)
T 2p11_A 215 IGDLVEMDAEWL 226 (231)
T ss_dssp GGGGGGCGGGGC
T ss_pred HHHHHHHHHHHH
Confidence 999988887654
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.9e-26 Score=175.78 Aligned_cols=119 Identities=18% Similarity=0.170 Sum_probs=94.3
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhc--C---------CCCCcceeEeeeccccCccCCCHHHHHHH
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPAL--G---------VNQGTEWDFGVFSGLEGVEKPDPRIYEIA 181 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~--g---------l~~~~~f~~~~~~~~~~~~kp~~~~~~~~ 181 (253)
..++||+.++|++ |++++|+||++...++..++.. | +.. +|+..+.+ .....||+|+.|..+
T Consensus 124 ~~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~--~~~~~f~~-~~~g~KP~p~~~~~a 196 (253)
T 2g80_A 124 APVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNS--YIDGYFDI-NTSGKKTETQSYANI 196 (253)
T ss_dssp BCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGG--GCCEEECH-HHHCCTTCHHHHHHH
T ss_pred CCCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHh--hcceEEee-eccCCCCCHHHHHHH
Confidence 5788999999988 8999999999998888888766 4 555 56654433 331259999999999
Q ss_pred HHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHH
Q 039449 182 LERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAV 242 (253)
Q Consensus 182 ~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el 242 (253)
++++| ++|++|+||||+. +|+.+|+++|+.++++++.+...... ..++.++.|+.||
T Consensus 197 ~~~lg-~~p~~~l~vgDs~-~di~aA~~aG~~~i~v~~~~~~~~~~--~~~~~~i~~l~eL 253 (253)
T 2g80_A 197 LRDIG-AKASEVLFLSDNP-LELDAAAGVGIATGLASRPGNAPVPD--GQKYQVYKNFETL 253 (253)
T ss_dssp HHHHT-CCGGGEEEEESCH-HHHHHHHTTTCEEEEECCTTSCCCCS--SCCSCEESCSTTC
T ss_pred HHHcC-CCcccEEEEcCCH-HHHHHHHHcCCEEEEEcCCCCCCccc--ccCCCccCChhhC
Confidence 99999 9999999999999 89999999999999998644432111 1255788888764
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.3e-26 Score=165.72 Aligned_cols=131 Identities=21% Similarity=0.214 Sum_probs=106.4
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCc---------------chhhhhhhhcC--CCCCcceeEeee-ccccCccCCC
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEY---------------RYQDVILPALG--VNQGTEWDFGVF-SGLEGVEKPD 174 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~---------------~~~~~~l~~~g--l~~~~~f~~~~~-~~~~~~~kp~ 174 (253)
++++||+.++|++|+++|++++|+||++. ..+...++.+| ++. +|..... ++..+..||+
T Consensus 26 ~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~--~~~~~~~~~~~~~~~KP~ 103 (179)
T 3l8h_A 26 WIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDA--IFMCPHGPDDGCACRKPL 103 (179)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCE--EEEECCCTTSCCSSSTTS
T ss_pred ceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeE--EEEcCCCCCCCCCCCCCC
Confidence 37889999999999999999999999986 45567778888 443 3322222 3566778999
Q ss_pred HHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhh---hcCCcccCCHHHHHHHHhh
Q 039449 175 PRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWR---KSGAIVLPDLVAVKEFLTS 248 (253)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~---~~~~~~i~~l~el~~~l~~ 248 (253)
|++|..++++++ ++++++++|||+. +|+.+|+++|++++++.+ +........ ..++++++|+.|+.++|.+
T Consensus 104 ~~~~~~~~~~~~-~~~~~~~~vGD~~-~Di~~a~~aG~~~i~v~~-g~~~~~~~~~~~~~~d~v~~~l~el~~~l~~ 177 (179)
T 3l8h_A 104 PGMYRDIARRYD-VDLAGVPAVGDSL-RDLQAAAQAGCAPWLVQT-GNGRKTLAQGGLPEGTRVCEDLAAVAEQLLQ 177 (179)
T ss_dssp SHHHHHHHHHHT-CCCTTCEEEESSH-HHHHHHHHHTCEEEEEST-TTHHHHHHHCCCCTTEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHHcC-CCHHHEEEECCCH-HHHHHHHHCCCcEEEECC-CCcchhhhhcccCCCcEEecCHHHHHHHHHh
Confidence 999999999999 9999999999999 999999999999999984 443333331 3456899999999998865
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-26 Score=171.72 Aligned_cols=186 Identities=17% Similarity=0.201 Sum_probs=130.7
Q ss_pred cCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHH-HHHHHHHhhCCCCCCCCCCChHHHHHHHHHHH
Q 039449 5 SRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFK-LAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDS 83 (253)
Q Consensus 5 ~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (253)
+++|+|+||+||||+++...+. ...+.++|.... ......+. ........ .+.++..+++.. .
T Consensus 3 ~m~k~iiFDlDGTL~d~~~~~~---~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~-------~g~~~~~~~~~~----~ 66 (211)
T 2i6x_A 3 AMIRNIVFDLGGVLIHLNREES---IRRFKAIGVADI--EEMLDPYLQKGLFLDLE-------SGRKSEEEFRTE----L 66 (211)
T ss_dssp CCCSEEEECSBTTTEEECHHHH---HHHHHHTTCTTH--HHHTCC---CCHHHHHH-------HSSSCHHHHHHH----H
T ss_pred ccceEEEEeCCCeeEecchHHH---HHHHHHhCCchH--HHHHHHHhCchHHHHHH-------cCCCCHHHHHHH----H
Confidence 3479999999999999875432 566777776431 11111000 00000000 011223333222 2
Q ss_pred HHHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhh------cCCCCCc
Q 039449 84 FVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPA------LGVNQGT 157 (253)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~------~gl~~~~ 157 (253)
...++...+.+.+... + ... ...++|++.++|+.|++ |++++++||+....+...++. +|+..
T Consensus 67 ~~~~~~~~~~~~~~~~---~-~~~----~~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~-- 135 (211)
T 2i6x_A 67 SRYIGKELTYQQVYDA---L-LGF----LEEISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDS-- 135 (211)
T ss_dssp HHHHTSCCCHHHHHHH---H-GGG----EEEECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGG--
T ss_pred HHHhCCCCCHHHHHHH---H-HHh----hcccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHH--
Confidence 3333333333332221 1 111 13678999999999998 999999999999888888888 79987
Q ss_pred ceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcC
Q 039449 158 EWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDR 219 (253)
Q Consensus 158 ~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~ 219 (253)
+|+.++.+...+..||+++.+..++++++ +++++|++|||+. +|+.+|+++|++++++++
T Consensus 136 ~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~-~~~~~~~~igD~~-~Di~~a~~aG~~~~~~~~ 195 (211)
T 2i6x_A 136 FFDKVYASCQMGKYKPNEDIFLEMIADSG-MKPEETLFIDDGP-ANVATAERLGFHTYCPDN 195 (211)
T ss_dssp GSSEEEEHHHHTCCTTSHHHHHHHHHHHC-CCGGGEEEECSCH-HHHHHHHHTTCEEECCCT
T ss_pred HcCeEEeecccCCCCCCHHHHHHHHHHhC-CChHHeEEeCCCH-HHHHHHHHcCCEEEEECC
Confidence 89999999888999999999999999999 9999999999999 899999999999999984
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.1e-26 Score=167.18 Aligned_cols=128 Identities=13% Similarity=0.111 Sum_probs=103.3
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCC-C
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAP-E 191 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~-~ 191 (253)
..++||+.++|+.|+++|++++|+||.........+ + . +|+.++++++.+..||+|+.+..++++++ +.+ +
T Consensus 35 ~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~---~--~--~~d~v~~~~~~~~~KP~p~~~~~a~~~l~-~~~~~ 106 (196)
T 2oda_A 35 AQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLA---A--P--VNDWMIAAPRPTAGWPQPDACWMALMALN-VSQLE 106 (196)
T ss_dssp GSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHH---T--T--TTTTCEECCCCSSCTTSTHHHHHHHHHTT-CSCST
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhc---C--c--cCCEEEECCcCCCCCCChHHHHHHHHHcC-CCCCc
Confidence 378899999999999999999999998876653322 2 2 67777888888889999999999999999 975 8
Q ss_pred ceEEEcCCcccchhhhhhcCCeEEEEcCCCCC---C-------------------hhhhh-hcCCcccCCHHHHHHHHhh
Q 039449 192 EALHIGDSFRKDYVPAKSVGMHALLVDRFKTP---D-------------------AKEWR-KSGAIVLPDLVAVKEFLTS 248 (253)
Q Consensus 192 ~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~---~-------------------~~~~~-~~~~~~i~~l~el~~~l~~ 248 (253)
+|+||||+. +|+.+|+++|+.+|++.+.... . ...+. ..++++++++.||..+|..
T Consensus 107 ~~v~VGDs~-~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~d~vi~~~~eL~~~l~~ 185 (196)
T 2oda_A 107 GCVLISGDP-RLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATLKLYSLGVHSVIDHLGELESCLAD 185 (196)
T ss_dssp TCEEEESCH-HHHHHHHHHTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEESSGGGHHHHHHH
T ss_pred cEEEEeCCH-HHHHHHHHCCCEEEEEccCCccccccHHHhhhcchhhhhhhHHHHHHHHHHcCCCEEeCCHHHHHHHHHH
Confidence 999999999 8999999999999999842221 0 11122 2356899999999988865
Q ss_pred h
Q 039449 249 E 249 (253)
Q Consensus 249 ~ 249 (253)
.
T Consensus 186 ~ 186 (196)
T 2oda_A 186 I 186 (196)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.6e-26 Score=176.46 Aligned_cols=130 Identities=24% Similarity=0.224 Sum_probs=105.7
Q ss_pred cCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCccee---EeeeccccCccCCCHHHHHHHHHHhCCCCCC
Q 039449 115 VFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWD---FGVFSGLEGVEKPDPRIYEIALERAGNIAPE 191 (253)
Q Consensus 115 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~---~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 191 (253)
++|++.++++.++ .|+++ ++||.+.......+...|+.. +|+ .++.+......||+|+++..+++++| ++++
T Consensus 123 ~~~~~~~~l~~l~-~~~~~-i~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~lg-i~~~ 197 (259)
T 2ho4_A 123 HYQLLNQAFRLLL-DGAPL-IAIHKARYYKRKDGLALGPGP--FVTALEYATDTKAMVVGKPEKTFFLEALRDAD-CAPE 197 (259)
T ss_dssp BHHHHHHHHHHHH-TTCCE-EESCCCSEEEETTEEEECSHH--HHHHHHHHHTCCCEECSTTSHHHHHHHGGGGT-CCGG
T ss_pred CHHHHHHHHHHHH-CCCEE-EEECCCCcCcccCCcccCCcH--HHHHHHHHhCCCceEecCCCHHHHHHHHHHcC-CChH
Confidence 5678999999999 88999 999998887777778888876 665 44555666778999999999999999 9999
Q ss_pred ceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhh--hhcCCcccCCHHHHHHHHhhh
Q 039449 192 EALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEW--RKSGAIVLPDLVAVKEFLTSE 249 (253)
Q Consensus 192 ~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~--~~~~~~~i~~l~el~~~l~~~ 249 (253)
+|++|||++.||+.+|+++|+.++++.+......+.. ...++++++++.|+.+++.+.
T Consensus 198 ~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~ 257 (259)
T 2ho4_A 198 EAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKINPPPYLTCESFPHAVDHILQH 257 (259)
T ss_dssp GEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGSSSCCSEEESCHHHHHHHHHHH
T ss_pred HEEEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccccCCCCCEEECCHHHHHHHHHHh
Confidence 9999999976899999999999999984322222211 234568999999999988764
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=6.6e-25 Score=163.44 Aligned_cols=129 Identities=18% Similarity=0.245 Sum_probs=107.0
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCC---------------cchhhhhhhhcCCCCCcceeEeeec------------
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAE---------------YRYQDVILPALGVNQGTEWDFGVFS------------ 165 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~---------------~~~~~~~l~~~gl~~~~~f~~~~~~------------ 165 (253)
..++||+.++|++|+++|++++++||+. ...+...++.+|+. |+.++.+
T Consensus 49 ~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~----f~~~~~~~~~~~~~~~~~~ 124 (211)
T 2gmw_A 49 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD----LDGIYYCPHHPQGSVEEFR 124 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC----CSEEEEECCBTTCSSGGGB
T ss_pred CcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc----eEEEEECCcCCCCcccccC
Confidence 3788999999999999999999999999 46677888888885 4444433
Q ss_pred cccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeE-EEEcCCCCCChhhhhhcCCcccCCHHHHHH
Q 039449 166 GLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHA-LLVDRFKTPDAKEWRKSGAIVLPDLVAVKE 244 (253)
Q Consensus 166 ~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~-i~~~~~~~~~~~~~~~~~~~~i~~l~el~~ 244 (253)
...+..||++++|..++++++ ++++++++|||+. +|+.+|+++|+.+ +++.+ +....+.....++++++++.||.+
T Consensus 125 ~~~~~~KP~p~~~~~~~~~lg-i~~~~~~~VGD~~-~Di~~a~~aG~~~~i~v~~-g~~~~~~~~~~~d~vi~~l~el~~ 201 (211)
T 2gmw_A 125 QVCDCRKPHPGMLLSARDYLH-IDMAASYMVGDKL-EDMQAAVAANVGTKVLVRT-GKPITPEAENAADWVLNSLADLPQ 201 (211)
T ss_dssp SCCSSSTTSCHHHHHHHHHHT-BCGGGCEEEESSH-HHHHHHHHTTCSEEEEESS-SSCCCHHHHHHCSEEESCGGGHHH
T ss_pred ccCcCCCCCHHHHHHHHHHcC-CCHHHEEEEcCCH-HHHHHHHHCCCceEEEEec-CCCccccccCCCCEEeCCHHHHHH
Confidence 235668999999999999999 9999999999999 9999999999999 99984 433333333446789999999999
Q ss_pred HHhh
Q 039449 245 FLTS 248 (253)
Q Consensus 245 ~l~~ 248 (253)
++.+
T Consensus 202 ~l~~ 205 (211)
T 2gmw_A 202 AIKK 205 (211)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 8875
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=99.92 E-value=9.5e-25 Score=164.30 Aligned_cols=202 Identities=13% Similarity=0.142 Sum_probs=132.1
Q ss_pred ccCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHH
Q 039449 4 LSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDS 83 (253)
Q Consensus 4 ~~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (253)
++++|+|+||+||||+++.. +..+++.+|......+.... ..+. ..+..+. +...
T Consensus 11 ~~~~k~viFD~DGTLvd~~~-----~~~~~~~~g~~~~~~~~~~~--------------~~~~--~~~~~~~----~~~~ 65 (225)
T 1nnl_A 11 FYSADAVCFDVDSTVIREEG-----IDELAKICGVEDAVSEMTRR--------------AMGG--AVPFKAA----LTER 65 (225)
T ss_dssp HHHCSEEEEETBTTTBSSCH-----HHHHHHHTTCTTTC----------------------------CHHHH----HHHH
T ss_pred HhhCCEEEEeCccccccccc-----HHHHHHHhCCcHHHHHHHHH--------------HHcC--CccHHHH----HHHH
Confidence 35689999999999999752 45678888875432211111 0111 1122222 2222
Q ss_pred HHHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEee
Q 039449 84 FVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGV 163 (253)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~ 163 (253)
+.... ...+. +.+++.. ...+++||+.++|+.|+++|++++++||+....++..++.+|+....+|+.++
T Consensus 66 ~~~~~--~~~~~----~~~~~~~----~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~ 135 (225)
T 1nnl_A 66 LALIQ--PSREQ----VQRLIAE----QPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRL 135 (225)
T ss_dssp HHHHC--CCHHH----HHHHHHH----SCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECE
T ss_pred HHHhc--CCHHH----HHHHHHh----ccCCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeE
Confidence 22211 12222 2223222 12478999999999999999999999999999999999999997222676653
Q ss_pred --------eccccCc----cCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhc
Q 039449 164 --------FSGLEGV----EKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKS 231 (253)
Q Consensus 164 --------~~~~~~~----~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~ 231 (253)
.+.+... .+|||+.+..++++++ + ++|++|||+. +|+.+|+++|+ ++.+.. ... .+.....
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~-~--~~~~~vGDs~-~Di~~a~~ag~-~i~~~~-~~~-~~~~~~~ 208 (225)
T 1nnl_A 136 KFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFH-F--KKIIMIGDGA-TDMEACPPADA-FIGFGG-NVI-RQQVKDN 208 (225)
T ss_dssp EECTTSCEEEECTTSGGGSTTHHHHHHHHHHHHHC-C--SCEEEEESSH-HHHTTTTTSSE-EEEECS-SCC-CHHHHHH
T ss_pred EEcCCCcEecCCCCCcccCCCchHHHHHHHHHHcC-C--CcEEEEeCcH-HhHHHHHhCCe-EEEecC-ccc-cHHHHhc
Confidence 2333221 3578899999999999 7 7899999999 99999999999 787752 222 2223345
Q ss_pred CCcccCCHHHHHHHHh
Q 039449 232 GAIVLPDLVAVKEFLT 247 (253)
Q Consensus 232 ~~~~i~~l~el~~~l~ 247 (253)
++++++++.|+.++|.
T Consensus 209 ~~~~~~~~~el~~~l~ 224 (225)
T 1nnl_A 209 AKWYITDFVELLGELE 224 (225)
T ss_dssp CSEEESCGGGGCC---
T ss_pred CCeeecCHHHHHHHHh
Confidence 6789999999877664
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=2.1e-24 Score=161.34 Aligned_cols=124 Identities=13% Similarity=0.153 Sum_probs=104.8
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEee----------eccccCccCCCHHHHHHHH
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGV----------FSGLEGVEKPDPRIYEIAL 182 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~----------~~~~~~~~kp~~~~~~~~~ 182 (253)
..++|++.++|+.|+++|++++++||+....++..++.+|+.. +|+.++ +++.....|||+++++.++
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~--~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~~ 151 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDA--AFSNTLIVENDALNGLVTGHMMFSHSKGEMLLVLQ 151 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSE--EEEEEEEEETTEEEEEEEESCCSTTHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcch--hccceeEEeCCEEEeeeccCCCCCCChHHHHHHHH
Confidence 4789999999999999999999999999999999999999998 888876 3444556799999999999
Q ss_pred HHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccC--CHHHHHHHH
Q 039449 183 ERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLP--DLVAVKEFL 246 (253)
Q Consensus 183 ~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~--~l~el~~~l 246 (253)
++++ +++++|++|||+. +|+.+|+++|+++++ +. .+.+....+++++ +|.++.+++
T Consensus 152 ~~~g-~~~~~~i~vGDs~-~Di~~a~~aG~~~~~-~~-----~~~l~~~ad~v~~~~dl~~~~~~~ 209 (217)
T 3m1y_A 152 RLLN-ISKTNTLVVGDGA-NDLSMFKHAHIKIAF-NA-----KEVLKQHATHCINEPDLALIKPLI 209 (217)
T ss_dssp HHHT-CCSTTEEEEECSG-GGHHHHTTCSEEEEE-SC-----CHHHHTTCSEEECSSBGGGGTTC-
T ss_pred HHcC-CCHhHEEEEeCCH-HHHHHHHHCCCeEEE-Cc-----cHHHHHhcceeecccCHHHHHHHh
Confidence 9999 9999999999999 999999999999988 41 2444555666665 666666554
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.92 E-value=2.1e-25 Score=170.14 Aligned_cols=204 Identities=16% Similarity=0.200 Sum_probs=136.6
Q ss_pred CceEEEEecCCceeccCCCHHHH--HHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHH
Q 039449 6 RLRCITVDVTGTLLAYKGELGDY--YCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDS 83 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (253)
++|+|+||+||||+++...+..+ +...+++.|++..... .....+.... ...
T Consensus 2 ~~k~i~fDlDGTLl~~~~~~~~~~~~~~~l~~~g~~~~~~t---------------------~~~g~~~~~~-----~~~ 55 (250)
T 2c4n_A 2 TIKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLT---------------------NYPSQTGQDL-----ANR 55 (250)
T ss_dssp CCCEEEEECBTTTEETTEECTTHHHHHHHHHHTTCCEEEEE---------------------SCCSCCHHHH-----HHH
T ss_pred CccEEEEcCcceEEeCCEeCcCHHHHHHHHHHcCCcEEEEE---------------------CCCCCCHHHH-----HHH
Confidence 48999999999999988765555 5566677787542100 0011122222 122
Q ss_pred HHHcCCCCChHHH---HHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEE--------------------------
Q 039449 84 FVRAGYDYDEDTF---EKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVG-------------------------- 134 (253)
Q Consensus 84 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~-------------------------- 134 (253)
+...+...+...+ ......+... . .....+++++.++++.+++.|++++
T Consensus 56 ~~~~g~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (250)
T 2c4n_A 56 FATAGVDVPDSVFYTSAMATADFLRR-Q-EGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYF 133 (250)
T ss_dssp HHHTTCCCCGGGEEEHHHHHHHHHHT-S-SCCEEEEECCTHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHH
T ss_pred HHHcCCCCCHHHeEcHHHHHHHHHHh-c-CCCEEEEEcCHHHHHHHHHcCCcccCCCCCEEEEeCCCCCCHHHHHHHHHH
Confidence 2334443222211 1111222222 1 2234678999999999999999998
Q ss_pred -------EEeCCCcchhhhhhhhcC-CCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCC-cccchh
Q 039449 135 -------IISNAEYRYQDVILPALG-VNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDS-FRKDYV 205 (253)
Q Consensus 135 -------i~s~~~~~~~~~~l~~~g-l~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~-~~~Di~ 205 (253)
++||.. ......++.+| +.. +|+.....+.....||++.+++.+++++| +++++|++|||+ . ||+.
T Consensus 134 ~~~~~~~i~t~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~kpk~~~~~~~~~~lg-i~~~~~i~iGD~~~-nDi~ 208 (250)
T 2c4n_A 134 VANGARFIATNPD-THGRGFYPACGALCA--GIEKISGRKPFYVGKPSPWIIRAALNKMQ-AHSEETVIVGDNLR-TDIL 208 (250)
T ss_dssp HHTTCEEEESCCC-SBSSTTCBCHHHHHH--HHHHHHCCCCEECSTTSTHHHHHHHHHHT-CCGGGEEEEESCTT-THHH
T ss_pred HHCCCEEEEECCC-CCCCCeeecchHHHH--HHHHHhCCCceEeCCCCHHHHHHHHHHcC-CCcceEEEECCCch-hHHH
Confidence 888877 54555555555 444 55554445556778999999999999999 999999999999 7 9999
Q ss_pred hhhhcCCeEEEEcCCCCCChhhhh---hcCCcccCCHHHHH
Q 039449 206 PAKSVGMHALLVDRFKTPDAKEWR---KSGAIVLPDLVAVK 243 (253)
Q Consensus 206 ~a~~~G~~~i~~~~~~~~~~~~~~---~~~~~~i~~l~el~ 243 (253)
|++.+|++++++.+ +....+.+. ..++++++++.|+.
T Consensus 209 ~~~~aG~~~~~v~~-g~~~~~~~~~~~~~~~~v~~~~~el~ 248 (250)
T 2c4n_A 209 AGFQAGLETILVLS-GVSSLDDIDSMPFRPSWIYPSVAEID 248 (250)
T ss_dssp HHHHTTCEEEEESS-SSCCGGGGSSCSSCCSEEESSGGGCC
T ss_pred HHHHcCCeEEEECC-CCCChhhhhhcCCCCCEEECCHHHhh
Confidence 99999999999984 444434443 34668999998864
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=99.92 E-value=6.2e-24 Score=157.67 Aligned_cols=194 Identities=14% Similarity=0.128 Sum_probs=133.8
Q ss_pred ceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHHH
Q 039449 7 LRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFVR 86 (253)
Q Consensus 7 ~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (253)
+|+|+||+||||++ ..+..+++++|.+... ...........+....+.....
T Consensus 2 ~k~viFD~DGTL~d------~~~~~~~~~~g~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~- 53 (206)
T 1rku_A 2 MEIACLDLEGVLVP------EIWIAFAEKTGIDALK---------------------ATTRDIPDYDVLMKQRLRILDE- 53 (206)
T ss_dssp CEEEEEESBTTTBC------CHHHHHHHHHTCGGGG---------------------CCTTTCCCHHHHHHHHHHHHHH-
T ss_pred CcEEEEccCCcchh------hHHHHHHHHcCChHHH---------------------HHhcCcCCHHHHHHHHHHHHHH-
Confidence 68999999999999 4667778888875310 0000011111221111222221
Q ss_pred cCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCccee-Eeeec
Q 039449 87 AGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWD-FGVFS 165 (253)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~-~~~~~ 165 (253)
.+. +.+.+.. +. ....++||+.++++.|+++ ++++++||+....++..++.+|+.. +|. .+.++
T Consensus 54 ~~~--~~~~~~~----~~------~~~~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~--~f~~~~~~~ 118 (206)
T 1rku_A 54 HGL--KLGDIQE----VI------ATLKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPT--LLCHKLEID 118 (206)
T ss_dssp TTC--CHHHHHH----HH------TTCCCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCC--EEEEEEEEC
T ss_pred CCC--CHHHHHH----HH------HhcCCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcc--eecceeEEc
Confidence 122 2222222 21 1247899999999999999 9999999999999999999999998 884 55554
Q ss_pred cccC--c-cCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhh-cCCcc-cCCHH
Q 039449 166 GLEG--V-EKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRK-SGAIV-LPDLV 240 (253)
Q Consensus 166 ~~~~--~-~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~-~~~~~-i~~l~ 240 (253)
.... . .+|+|+.+..++++++ .++++|++|||+. +|+.+|+++|+++++ +. ...+.. .+.++ +.++.
T Consensus 119 ~~~~~~~~~~p~p~~~~~~l~~l~-~~~~~~~~iGD~~-~Di~~a~~aG~~~~~-~~-----~~~~~~~~~~~~~~~~~~ 190 (206)
T 1rku_A 119 DSDRVVGYQLRQKDPKRQSVIAFK-SLYYRVIAAGDSY-NDTTMLSEAHAGILF-HA-----PENVIREFPQFPAVHTYE 190 (206)
T ss_dssp TTSCEEEEECCSSSHHHHHHHHHH-HTTCEEEEEECSS-TTHHHHHHSSEEEEE-SC-----CHHHHHHCTTSCEECSHH
T ss_pred CCceEEeeecCCCchHHHHHHHHH-hcCCEEEEEeCCh-hhHHHHHhcCccEEE-CC-----cHHHHHHHhhhccccchH
Confidence 4432 1 2488899999999999 9999999999999 999999999998764 31 122333 33454 89999
Q ss_pred HHHHHHhhhhh
Q 039449 241 AVKEFLTSEIS 251 (253)
Q Consensus 241 el~~~l~~~~~ 251 (253)
++.++|.+..+
T Consensus 191 ~l~~~l~~~~~ 201 (206)
T 1rku_A 191 DLKREFLKASS 201 (206)
T ss_dssp HHHHHHHHHCS
T ss_pred HHHHHHHHHhc
Confidence 99999877553
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=7.5e-24 Score=178.95 Aligned_cols=196 Identities=19% Similarity=0.249 Sum_probs=130.4
Q ss_pred CceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHH--
Q 039449 6 RLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDS-- 83 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 83 (253)
++|+|+||+||||++.. ....+.......+...................... ..+..+..+++..+....
T Consensus 2 ~~k~viFD~DGTL~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 73 (555)
T 3i28_A 2 TLRAAVFDLDGVLALPA--VFGVLGRTEEALALPRGLLNDAFQKGGPEGATTRL------MKGEITLSQWIPLMEENCRK 73 (555)
T ss_dssp --CEEEECTBTTTEESC--THHHHHHHHHHTTCCTTHHHHHHHTTGGGSHHHHH------HTTSSCHHHHHHHHHHHHHH
T ss_pred ceEEEEEecCCeeecch--hHHHHHHHHHHhCCcHHHHHHHHhccCcccchhHH------hcCCCCHHHHHHHHHHHHHH
Confidence 58999999999998654 45667777778777643322221110000000000 012233344433322221
Q ss_pred -HHHcCCCCCh-HHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCC--Ccchhhhhhhhc--CCCCCc
Q 039449 84 -FVRAGYDYDE-DTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNA--EYRYQDVILPAL--GVNQGT 157 (253)
Q Consensus 84 -~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~--~~~~~~~~l~~~--gl~~~~ 157 (253)
.......... ......+...... ..++||+.++|+.|+++|++++|+||+ ........+... |+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~-- 145 (555)
T 3i28_A 74 CSETAKVCLPKNFSIKEIFDKAISA------RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKM-- 145 (555)
T ss_dssp HHHHTTCCCCTTCCHHHHHHHHHHH------CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHT--
T ss_pred hhhccCCCCCccccHHHHHHHhHhh------cCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhh--
Confidence 1222221111 1133333333332 378899999999999999999999998 333334444444 7777
Q ss_pred ceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcC
Q 039449 158 EWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDR 219 (253)
Q Consensus 158 ~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~ 219 (253)
+|+.++++++.+..||+|+.|..+++++| +++++|++|||+. +|+.+|+++|+.++++++
T Consensus 146 ~fd~i~~~~~~~~~KP~p~~~~~~~~~lg-~~p~~~~~v~D~~-~di~~a~~aG~~~~~~~~ 205 (555)
T 3i28_A 146 HFDFLIESCQVGMVKPEPQIYKFLLDTLK-ASPSEVVFLDDIG-ANLKPARDLGMVTILVQD 205 (555)
T ss_dssp TSSEEEEHHHHTCCTTCHHHHHHHHHHHT-CCGGGEEEEESCH-HHHHHHHHHTCEEEECSS
T ss_pred heeEEEeccccCCCCCCHHHHHHHHHHcC-CChhHEEEECCcH-HHHHHHHHcCCEEEEECC
Confidence 99999999999999999999999999999 9999999999999 899999999999999984
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.1e-24 Score=161.30 Aligned_cols=130 Identities=11% Similarity=0.118 Sum_probs=99.9
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeecccc------CccCCCHHHHH-HHHHHhC
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLE------GVEKPDPRIYE-IALERAG 186 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~------~~~kp~~~~~~-~~~~~~~ 186 (253)
.++|++.++++.|+++|++++++||+....++..++.+|+....+|...+..... ...+|++..+. .+.+.++
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 161 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKAKG 161 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHHGG
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHHhC
Confidence 5789999999999999999999999999999999999999532255433332222 33566655444 4455569
Q ss_pred CCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHHHHHH
Q 039449 187 NIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKEFL 246 (253)
Q Consensus 187 ~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~~~l 246 (253)
++++++++|||+. ||+.++ ++|+.++++.....+..+.....++++++|++|+.++|
T Consensus 162 -~~~~~~~~vGD~~-~Di~~~-~~G~~~~~v~~~~~~~~~~~~~~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 162 -LIDGEVIAIGDGY-TDYQLY-EKGYATKFIAYMEHIEREKVINLSKYVARNVAELASLI 218 (219)
T ss_dssp -GCCSEEEEEESSH-HHHHHH-HHTSCSEEEEECSSCCCHHHHHHCSEEESSHHHHHHHH
T ss_pred -CCCCCEEEEECCH-hHHHHH-hCCCCcEEEeccCccccHHHHhhcceeeCCHHHHHHhh
Confidence 9999999999999 999998 68999888873333344455566789999999999876
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.1e-24 Score=169.74 Aligned_cols=126 Identities=15% Similarity=0.071 Sum_probs=104.4
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeec----------cccCccCCCHHHHHHHH
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFS----------GLEGVEKPDPRIYEIAL 182 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~----------~~~~~~kp~~~~~~~~~ 182 (253)
+.++||+.++|+.|+++|++++++||+....++.+++.+|+.. +|+.++.. ......||+++.+..++
T Consensus 178 ~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~--~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~~ 255 (317)
T 4eze_A 178 MTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDY--AFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDLA 255 (317)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSE--EEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHH
T ss_pred CEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCe--EEEEEEEeeCCeeeeeEecccCCCCCCHHHHHHHH
Confidence 4789999999999999999999999999999999999999988 88876543 23345589999999999
Q ss_pred HHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCC--cccCCHHHHHHHHhh
Q 039449 183 ERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGA--IVLPDLVAVKEFLTS 248 (253)
Q Consensus 183 ~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~--~~i~~l~el~~~l~~ 248 (253)
++++ ++++++++|||+. +|+.+|+++|+.+++ +. . +......+ ....++.++..+|++
T Consensus 256 ~~lg-v~~~~~i~VGDs~-~Di~aa~~AG~~va~-~~----~-~~~~~~a~~~i~~~~L~~ll~~L~~ 315 (317)
T 4eze_A 256 ARLN-IATENIIACGDGA-NDLPMLEHAGTGIAW-KA----K-PVVREKIHHQINYHGFELLLFLIED 315 (317)
T ss_dssp HHHT-CCGGGEEEEECSG-GGHHHHHHSSEEEEE-SC----C-HHHHHHCCEEESSSCGGGGGGGTCS
T ss_pred HHcC-CCcceEEEEeCCH-HHHHHHHHCCCeEEe-CC----C-HHHHHhcCeeeCCCCHHHHHHHHHh
Confidence 9999 9999999999999 999999999998887 31 1 22222233 456789988877754
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.7e-24 Score=166.89 Aligned_cols=125 Identities=18% Similarity=0.156 Sum_probs=97.6
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcch--hhh-hhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCC
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRY--QDV-ILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIA 189 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~--~~~-~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~ 189 (253)
..++|++.++++.|+ .|+++ ++||.+... ... .+...++.. +|+.++.+...+..||+|++|+.++++++ ++
T Consensus 125 ~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~~~~~~~~l~~--~f~~~~~~~~~~~~KP~p~~~~~~~~~~~-~~ 199 (264)
T 1yv9_A 125 ELSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERGLLPGAGSVVT--FVETATQTKPVYIGKPKAIIMERAIAHLG-VE 199 (264)
T ss_dssp TCCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHH--HHHHHHTCCCEECSTTSHHHHHHHHHHHC-SC
T ss_pred CcCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCCcccCCcHHHH--HHHHHhCCCccccCCCCHHHHHHHHHHcC-CC
Confidence 357889999999997 88997 889988743 222 233444655 77777777777788999999999999999 99
Q ss_pred CCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhh---cCCcccCCHHHHH
Q 039449 190 PEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRK---SGAIVLPDLVAVK 243 (253)
Q Consensus 190 ~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~---~~~~~i~~l~el~ 243 (253)
++++++|||++.+|+.+|+++|+++|++.+ +....+.+.. .++++++++.|+.
T Consensus 200 ~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~-g~~~~~~l~~~~~~~d~v~~~l~el~ 255 (264)
T 1yv9_A 200 KEQVIMVGDNYETDIQSGIQNGIDSLLVTS-GFTPKSAVPTLPTPPTYVVDSLDEWT 255 (264)
T ss_dssp GGGEEEEESCTTTHHHHHHHHTCEEEEETT-SSSCSSSTTTCSSCCSEEESSGGGCC
T ss_pred HHHEEEECCCcHHHHHHHHHcCCcEEEECC-CCCCHHHHHhcCCCCCEEEecHHHHh
Confidence 999999999933899999999999999994 4333333332 4678999998864
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=99.89 E-value=2.4e-23 Score=157.82 Aligned_cols=125 Identities=14% Similarity=0.085 Sum_probs=99.8
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCc--------cCCCHHH-HH----
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGV--------EKPDPRI-YE---- 179 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~--------~kp~~~~-~~---- 179 (253)
..++||+.++|+.|+++|++++|+||+....++..++ |+.. + +.++.+..... .||+|.. +.
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~--~-~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~ 150 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVE--K-DRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGC 150 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSC--G-GGEEEEEEECSSSBCEEECTTCCCTTCCSCCSS
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCC--C-CeEEeeeeEEcCCceEEecCCCCccccccccCC
Confidence 3789999999999999999999999999888888888 7765 4 55555554433 6888884 54
Q ss_pred ---HHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhc--CCcccCCHHHHHHHHhhh
Q 039449 180 ---IALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKS--GAIVLPDLVAVKEFLTSE 249 (253)
Q Consensus 180 ---~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~--~~~~i~~l~el~~~l~~~ 249 (253)
.++++++ ++++++++|||+. +|+.+|+++|+.++. ++. .+.+... +++++.++.|+.++|.+.
T Consensus 151 ~K~~~~~~~~-~~~~~~~~vGDs~-~Di~~a~~aG~~~~~---~~~--~~~~~~~~~~~~~~~~~~el~~~l~~~ 218 (236)
T 2fea_A 151 CKPSVIHELS-EPNQYIIMIGDSV-TDVEAAKLSDLCFAR---DYL--LNECREQNLNHLPYQDFYEIRKEIENV 218 (236)
T ss_dssp CHHHHHHHHC-CTTCEEEEEECCG-GGHHHHHTCSEEEEC---HHH--HHHHHHTTCCEECCSSHHHHHHHHHTS
T ss_pred cHHHHHHHHh-ccCCeEEEEeCCh-HHHHHHHhCCeeeec---hHH--HHHHHHCCCCeeecCCHHHHHHHHHHh
Confidence 8899999 9999999999999 999999999999863 121 2233333 558999999999988764
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.5e-23 Score=156.94 Aligned_cols=132 Identities=19% Similarity=0.187 Sum_probs=108.0
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCc---------------chhhhhhhhcCCCCCcceeEeeec------------c
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEY---------------RYQDVILPALGVNQGTEWDFGVFS------------G 166 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~---------------~~~~~~l~~~gl~~~~~f~~~~~~------------~ 166 (253)
.++||+.++|++|+++|++++++||+.. ..+...++.+|+. |+.++.+ +
T Consensus 56 ~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~----~~~~~~~~~~~~g~~~~~~~ 131 (218)
T 2o2x_A 56 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF----VDMVLACAYHEAGVGPLAIP 131 (218)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC----CSEEEEECCCTTCCSTTCCS
T ss_pred eECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCc----eeeEEEeecCCCCceeeccc
Confidence 7789999999999999999999999987 6777888888874 2332222 4
Q ss_pred ccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeE-EEEcCCCCCChhhhhhcCCcccCCHHHHHHH
Q 039449 167 LEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHA-LLVDRFKTPDAKEWRKSGAIVLPDLVAVKEF 245 (253)
Q Consensus 167 ~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~-i~~~~~~~~~~~~~~~~~~~~i~~l~el~~~ 245 (253)
.....||++.++..++++++ +++++++||||+. +|+.+|+++|+.+ +++.+ +....+.....++++++++.||.++
T Consensus 132 ~~~~~KP~~~~~~~~~~~~~-i~~~~~~~VGD~~-~Di~~a~~aG~~~~i~v~~-g~~~~~~~~~~~~~~i~~l~el~~~ 208 (218)
T 2o2x_A 132 DHPMRKPNPGMLVEAGKRLA-LDLQRSLIVGDKL-ADMQAGKRAGLAQGWLVDG-EAAVQPGFAIRPLRDSSELGDLLAA 208 (218)
T ss_dssp SCTTSTTSCHHHHHHHHHHT-CCGGGCEEEESSH-HHHHHHHHTTCSEEEEETC-CCEEETTEEEEEESSHHHHHHHHHH
T ss_pred CCccCCCCHHHHHHHHHHcC-CCHHHEEEEeCCH-HHHHHHHHCCCCEeEEEec-CCCCcccccCCCCEecccHHHHHHH
Confidence 45678999999999999999 9999999999999 9999999999999 99984 4332222233456899999999999
Q ss_pred Hhhhhhc
Q 039449 246 LTSEISA 252 (253)
Q Consensus 246 l~~~~~~ 252 (253)
+.+....
T Consensus 209 l~~~~~~ 215 (218)
T 2o2x_A 209 IETLGRD 215 (218)
T ss_dssp HHHTCCC
T ss_pred HHHHhcc
Confidence 9876544
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.1e-23 Score=144.68 Aligned_cols=100 Identities=21% Similarity=0.239 Sum_probs=93.4
Q ss_pred CCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEE
Q 039449 116 FPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALH 195 (253)
Q Consensus 116 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~ 195 (253)
+|++.++|++|+++|++++++||++...++..++.+|+.. +|+.++.+...+..||+++.+..++++++ ++++++++
T Consensus 20 ~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~--~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~-~~~~~~~~ 96 (137)
T 2pr7_A 20 QRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNG--VVDKVLLSGELGVEKPEEAAFQAAADAID-LPMRDCVL 96 (137)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTT--SSSEEEEHHHHSCCTTSHHHHHHHHHHTT-CCGGGEEE
T ss_pred CccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHh--hccEEEEeccCCCCCCCHHHHHHHHHHcC-CCcccEEE
Confidence 3577789999999999999999999999999999999988 89999988888899999999999999999 99999999
Q ss_pred EcCCcccchhhhhhcCCeEEEEcC
Q 039449 196 IGDSFRKDYVPAKSVGMHALLVDR 219 (253)
Q Consensus 196 iGD~~~~Di~~a~~~G~~~i~~~~ 219 (253)
|||+. +|+.+|+++|+.++++++
T Consensus 97 vgD~~-~di~~a~~~G~~~i~~~~ 119 (137)
T 2pr7_A 97 VDDSI-LNVRGAVEAGLVGVYYQQ 119 (137)
T ss_dssp EESCH-HHHHHHHHHTCEEEECSC
T ss_pred EcCCH-HHHHHHHHCCCEEEEeCC
Confidence 99999 899999999999999984
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=99.89 E-value=7.2e-22 Score=149.17 Aligned_cols=192 Identities=10% Similarity=-0.011 Sum_probs=129.2
Q ss_pred ccCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHH
Q 039449 4 LSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDS 83 (253)
Q Consensus 4 ~~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (253)
|+++++|+||+||||+++... ..+...+...+... ............+.... .+.++...+.......
T Consensus 1 M~~~k~viFDlDGTL~d~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--------~g~~~~~~~~~~~~~~- 68 (232)
T 3fvv_A 1 MTTRRLALFDLDHTLLPLDSD--YQWADFLARTGRAG-DPAEARRRNDDLMERYN--------RGELTAEQAAEFMLGL- 68 (232)
T ss_dssp -CCCEEEEECCBTTTBSSCHH--HHHHHHHHHTTSSS-SHHHHHHHHHHHHHHHH--------HTCSCHHHHHHHHHHH-
T ss_pred CCCCcEEEEeCCCCCcCCchH--HHHHHHHHHcCCCC-ccHHHHHHHHHHHHHHH--------CCCCCHHHHHHHHHHH-
Confidence 345799999999999998653 35555666666531 11222221112221111 1223334443322221
Q ss_pred HHHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEee
Q 039449 84 FVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGV 163 (253)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~ 163 (253)
+. ..+.+++......++...... .++||+.++|+.|+++|++++|+||+....++.+++.+|+.. +|...+
T Consensus 69 ~~----~~~~~~~~~~~~~~~~~~~~~---~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~--~~~~~~ 139 (232)
T 3fvv_A 69 LA----AHSPVELAAWHEEFMRDVIRP---SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQH--LIATDP 139 (232)
T ss_dssp HH----TSCHHHHHHHHHHHHHHTTGG---GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCE--EEECEE
T ss_pred hc----CCCHHHHHHHHHHHHHHhhhh---hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE--EEEcce
Confidence 21 336677777777776665422 578999999999999999999999999999999999999986 554433
Q ss_pred ecc----------ccCccCCCHHHHHHHHHHhCC--CCCCceEEEcCCcccchhhhhhcCCeEEEE
Q 039449 164 FSG----------LEGVEKPDPRIYEIALERAGN--IAPEEALHIGDSFRKDYVPAKSVGMHALLV 217 (253)
Q Consensus 164 ~~~----------~~~~~kp~~~~~~~~~~~~~~--~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~ 217 (253)
... .....++|++.++.++++++. +++++|++|||+. +|+.+++.+|+++++.
T Consensus 140 ~~~~~~~~g~~~~~~~~~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~-~D~~~~~~ag~~~~~~ 204 (232)
T 3fvv_A 140 EYRDGRYTGRIEGTPSFREGKVVRVNQWLAGMGLALGDFAESYFYSDSV-NDVPLLEAVTRPIAAN 204 (232)
T ss_dssp EEETTEEEEEEESSCSSTHHHHHHHHHHHHHTTCCGGGSSEEEEEECCG-GGHHHHHHSSEEEEES
T ss_pred EEECCEEeeeecCCCCcchHHHHHHHHHHHHcCCCcCchhheEEEeCCH-hhHHHHHhCCCeEEEC
Confidence 221 122346678889999988752 5789999999999 9999999999988763
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=7.1e-24 Score=163.99 Aligned_cols=127 Identities=15% Similarity=0.211 Sum_probs=99.9
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhh---hhhhcCCCCCcceeEeeeccc-cCccCCCHHHHHHHHHHhCCCC
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDV---ILPALGVNQGTEWDFGVFSGL-EGVEKPDPRIYEIALERAGNIA 189 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~---~l~~~gl~~~~~f~~~~~~~~-~~~~kp~~~~~~~~~~~~~~~~ 189 (253)
.+++++.+.++.+ +.|+++ ++||........ .++..++.. +|+.++..+. ....||++.+++.+++++| ++
T Consensus 137 ~~~~~~~~~l~~l-~~~~~~-i~tn~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~kpk~~~~~~~~~~lg-i~ 211 (271)
T 1vjr_A 137 LTYERLKKACILL-RKGKFY-IATHPDINCPSKEGPVPDAGSIMA--AIEASTGRKPDLIAGKPNPLVVDVISEKFG-VP 211 (271)
T ss_dssp CCHHHHHHHHHHH-TTTCEE-EESCCCSEECCTTSCEECHHHHHH--HHHHHHSCCCSEECSTTSTHHHHHHHHHHT-CC
T ss_pred cCHHHHHHHHHHH-HCCCeE-EEECCCccccCCCCccccccHHHH--HHHHHhCCCCcccCCCCCHHHHHHHHHHhC-CC
Confidence 4567888899999 788998 899987654322 344445555 6666556666 7788999999999999999 99
Q ss_pred CCceEEEcCC-cccchhhhhhcCCeEEEEcCCCCCChhhhhh---cCCcccCCHHHHHHHHh
Q 039449 190 PEEALHIGDS-FRKDYVPAKSVGMHALLVDRFKTPDAKEWRK---SGAIVLPDLVAVKEFLT 247 (253)
Q Consensus 190 ~~~~~~iGD~-~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~---~~~~~i~~l~el~~~l~ 247 (253)
++++++|||+ . ||+.+|+.+|++++++.+ +....+.+.. .++++++++.|+.++++
T Consensus 212 ~~e~i~iGD~~~-nDi~~a~~aG~~~i~v~~-g~~~~~~~~~~~~~~~~~i~~l~el~~~l~ 271 (271)
T 1vjr_A 212 KERMAMVGDRLY-TDVKLGKNAGIVSILVLT-GETTPEDLERAETKPDFVFKNLGELAKAVQ 271 (271)
T ss_dssp GGGEEEEESCHH-HHHHHHHHHTCEEEEESS-SSCCHHHHHHCSSCCSEEESSHHHHHHHHC
T ss_pred CceEEEECCCcH-HHHHHHHHcCCeEEEECC-CCCCHHHHhhcCCCCCEEECCHHHHHHHhC
Confidence 9999999999 6 999999999999999994 5444444433 46689999999988763
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.9e-22 Score=160.18 Aligned_cols=134 Identities=19% Similarity=0.261 Sum_probs=112.4
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCccee--EeeeccccC-----------ccCCCHHHHH
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWD--FGVFSGLEG-----------VEKPDPRIYE 179 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~--~~~~~~~~~-----------~~kp~~~~~~ 179 (253)
..++||+.++|+.|+++|++++|+||++...+...++.+|+.. +|+ .++++++.+ ..||+|+.|.
T Consensus 214 ~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~--~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~~ 291 (384)
T 1qyi_A 214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLP--YFEADFIATASDVLEAENMYPQARPLGKPNPFSYI 291 (384)
T ss_dssp SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGG--GSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHH
T ss_pred CCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChH--hcCCCEEEecccccccccccccccCCCCCCHHHHH
Confidence 4678999999999999999999999999999999999999988 888 667666554 3799999999
Q ss_pred HHHHHhCC-------------CCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCC---Chhhhh-hcCCcccCCHHHH
Q 039449 180 IALERAGN-------------IAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTP---DAKEWR-KSGAIVLPDLVAV 242 (253)
Q Consensus 180 ~~~~~~~~-------------~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~---~~~~~~-~~~~~~i~~l~el 242 (253)
.++++++. +++++|++|||+. +|+.+|+++|+.+|++.+ +.. ..+.+. ..++++++++.|+
T Consensus 292 ~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~-~Di~aAk~AG~~~I~V~~-g~~~~~~~~~l~~~~ad~vi~sl~eL 369 (384)
T 1qyi_A 292 AALYGNNRDKYESYINKQDNIVNKDDVFIVGDSL-ADLLSAQKIGATFIGTLT-GLKGKDAAGELEAHHADYVINHLGEL 369 (384)
T ss_dssp HHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSH-HHHHHHHHHTCEEEEESC-BTTBGGGHHHHHHTTCSEEESSGGGH
T ss_pred HHHHHcCCccccccccccccCCCCcCeEEEcCCH-HHHHHHHHcCCEEEEECC-CccccccHHHHhhcCCCEEECCHHHH
Confidence 99998751 5789999999999 999999999999999984 332 123332 2456899999999
Q ss_pred HHHHhhhh
Q 039449 243 KEFLTSEI 250 (253)
Q Consensus 243 ~~~l~~~~ 250 (253)
.+++....
T Consensus 370 ~~~l~~~~ 377 (384)
T 1qyi_A 370 RGVLDNLL 377 (384)
T ss_dssp HHHHSCTT
T ss_pred HHHHHHHH
Confidence 99987654
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.6e-22 Score=164.09 Aligned_cols=124 Identities=18% Similarity=0.176 Sum_probs=102.4
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeee----------ccccCccCCCHHHHHHHHH
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVF----------SGLEGVEKPDPRIYEIALE 183 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~----------~~~~~~~kp~~~~~~~~~~ 183 (253)
.++||+.++++.|++.|++++++||+....++.+++.+|+.. +|...+. .+.....||+++.+..+++
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~--~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~~~ 333 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDY--VAANELEIVDGTLTGRVVGPIIDRAGKATALREFAQ 333 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSE--EEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccc--eeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHHHH
Confidence 789999999999999999999999999999999999999987 6665331 2233447999999999999
Q ss_pred HhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCc--ccCCHHHHHHHHh
Q 039449 184 RAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAI--VLPDLVAVKEFLT 247 (253)
Q Consensus 184 ~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~--~i~~l~el~~~l~ 247 (253)
++| ++++++++|||+. +|+.+++++|+.+++ +. .+......++ ...+++++..++.
T Consensus 334 ~~g-i~~~~~i~vGD~~-~Di~~a~~aG~~va~-~~-----~~~~~~~ad~~i~~~~l~~ll~~l~ 391 (415)
T 3p96_A 334 RAG-VPMAQTVAVGDGA-NDIDMLAAAGLGIAF-NA-----KPALREVADASLSHPYLDTVLFLLG 391 (415)
T ss_dssp HHT-CCGGGEEEEECSG-GGHHHHHHSSEEEEE-SC-----CHHHHHHCSEEECSSCTTHHHHHTT
T ss_pred HcC-cChhhEEEEECCH-HHHHHHHHCCCeEEE-CC-----CHHHHHhCCEEEccCCHHHHHHHhC
Confidence 999 9999999999999 999999999999887 31 2233344554 4558888888775
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=3.2e-24 Score=157.61 Aligned_cols=183 Identities=14% Similarity=0.078 Sum_probs=123.4
Q ss_pred ceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHHH
Q 039449 7 LRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFVR 86 (253)
Q Consensus 7 ~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (253)
.++|+||+||||+|+...+..++..+++ |.+....+.+.. . ... ..+...+
T Consensus 2 ~k~viFDlDGTL~Ds~~~~~~~~~~~~~--g~~~~~~~~~~~---------------~------~~~----~~~~~~~-- 52 (193)
T 2i7d_A 2 SVRVLVDMDGVLADFEAGLLRGFRRRFP--EEPHVPLEQRRG---------------F------LAR----EQYRALR-- 52 (193)
T ss_dssp CEEEEECSBTTTBCHHHHHHHHHHHHST--TSCCCCGGGCCS---------------S------CHH----HHHHHHC--
T ss_pred CcEEEEECCCcCccchhHHHHHHHHHhc--CCCCCCHHHHHH---------------h------hHH----HHHHHHh--
Confidence 5899999999999998887788877776 654333221110 0 001 1111111
Q ss_pred cCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHc-CCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeec
Q 039449 87 AGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREK-GLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFS 165 (253)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~ 165 (253)
+ +....+...+..........++||+.++|++|+++ |++++++||+....++..++.+|+ |+.++.+
T Consensus 53 ---~----~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl-----f~~i~~~ 120 (193)
T 2i7d_A 53 ---P----DLADKVASVYEAPGFFLDLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW-----VEQHLGP 120 (193)
T ss_dssp ---T----THHHHHHHHHTSTTTTTTCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH-----HHHHHCH
T ss_pred ---H----HHHHHHHHHHHhcCccccCccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc-----hhhhcCH
Confidence 1 11223333333321122457899999999999999 999999999999999989998877 4443332
Q ss_pred cccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccc----hhhhh-hcCCeEEEEcCCCCCChhhhhhcCCcccCCH-
Q 039449 166 GLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKD----YVPAK-SVGMHALLVDRFKTPDAKEWRKSGAIVLPDL- 239 (253)
Q Consensus 166 ~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~D----i~~a~-~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l- 239 (253)
.++++++ +++++|++|||+. +| +.+|+ ++|+++|+++++... ...+ .....++.+|
T Consensus 121 --------------~~~~~~~-~~~~~~~~vgDs~-~dD~~~i~~A~~~aG~~~i~~~~~~~~-~~~~-~~~~~~v~~~~ 182 (193)
T 2i7d_A 121 --------------QFVERII-LTRDKTVVLGDLL-IDDKDTVRGQEETPSWEHILFTCCHNR-HLVL-PPTRRRLLSWS 182 (193)
T ss_dssp --------------HHHTTEE-ECSCGGGBCCSEE-EESSSCCCSSCSSCSSEEEEECCGGGT-TCCC-CTTSCEECSTT
T ss_pred --------------HHHHHcC-CCcccEEEECCch-hhCcHHHhhcccccccceEEEEeccCc-cccc-ccchHHHhhHH
Confidence 2788899 9999999999999 89 99999 999999999842211 1111 1123479999
Q ss_pred HHHHHHHhh
Q 039449 240 VAVKEFLTS 248 (253)
Q Consensus 240 ~el~~~l~~ 248 (253)
+++..+|.+
T Consensus 183 ~~~~~~~~~ 191 (193)
T 2i7d_A 183 DNWREILDS 191 (193)
T ss_dssp SCHHHHHHT
T ss_pred HHHHHHhhc
Confidence 667776654
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2.8e-23 Score=163.33 Aligned_cols=132 Identities=18% Similarity=0.202 Sum_probs=104.7
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchh--h-hhhhhcC-CCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCC
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQ--D-VILPALG-VNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNI 188 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~--~-~~l~~~g-l~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~ 188 (253)
..++|++.++++.|++.|+ ++++||.+.... . ..+...| +.. +|+.++.+......||++.+|+.++++++ +
T Consensus 155 ~~~~~~~~~~l~~l~~~g~-~~i~tn~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~~KP~~~~~~~~~~~lg-i 230 (306)
T 2oyc_A 155 HFSFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRTPGTGSLAA--AVETASGRQALVVGKPSPYMFECITENFS-I 230 (306)
T ss_dssp TCCHHHHHHHHHHHTSTTS-EEEESCCCCEEECTTSCEEECHHHHHH--HHHHHHTCCCEECSTTSTHHHHHHHHHSC-C
T ss_pred CCCHHHHHHHHHHHHcCCC-EEEEEcCCccccCCCCCcCCCCcHHHH--HHHHHhCCCceeeCCCCHHHHHHHHHHcC-C
Confidence 3557889999999999898 899999987654 2 4455556 555 77776667777788999999999999999 9
Q ss_pred CCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhh---------hcCCcccCCHHHHHHHHhhh
Q 039449 189 APEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWR---------KSGAIVLPDLVAVKEFLTSE 249 (253)
Q Consensus 189 ~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~---------~~~~~~i~~l~el~~~l~~~ 249 (253)
+++++++|||++.+|+.+|+++|++++++.+ +....+.+. ..++++++++.||..++++.
T Consensus 231 ~~~e~l~vGD~~~~Di~~a~~aG~~~i~v~~-g~~~~~~~~~~~~~~~~~~~pd~vi~~l~el~~~l~~~ 299 (306)
T 2oyc_A 231 DPARTLMVGDRLETDILFGHRCGMTTVLTLT-GVSRLEEAQAYLAAGQHDLVPHYYVESIADLTEGLEDE 299 (306)
T ss_dssp CGGGEEEEESCTTTHHHHHHHHTCEEEEESS-SSCCHHHHHHHHHTTCGGGSCSEEESSGGGGGGGC---
T ss_pred ChHHEEEECCCchHHHHHHHHCCCeEEEECC-CCCCHHHHHhhhcccccCCCCCEEECCHHHHHHHHHhh
Confidence 9999999999954899999999999999994 544443332 24678999999998887654
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.3e-22 Score=156.67 Aligned_cols=130 Identities=22% Similarity=0.231 Sum_probs=93.6
Q ss_pred CCChHHHHHHHHHc-CCEEEEEeCCCcchhhhhhhhcCCCCCccee---EeeeccccCccCCCHHHHHHHHHHhCCCCCC
Q 039449 116 FPDSQPFLRWAREK-GLIVGIISNAEYRYQDVILPALGVNQGTEWD---FGVFSGLEGVEKPDPRIYEIALERAGNIAPE 191 (253)
Q Consensus 116 ~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~---~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 191 (253)
++++.+.++.+++. |+++ ++|+.........+...++.. +|. .....+.....||++.+++.+++++| ++++
T Consensus 133 ~~~~~~~l~~l~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lg-i~~~ 208 (271)
T 2x4d_A 133 YQNMNNAFQVLMELEKPVL-ISLGKGRYYAATSGLMLDVGP--YMKALEYACGIKAEVVGKPSPEFFKSALQAIG-VEAH 208 (271)
T ss_dssp HHHHHHHHHHHHHCSSCCE-EEECCCSEEEETTEEEECHHH--HHHHHHHHHTCCCEEESTTCHHHHHHHHHHHT-CCGG
T ss_pred HHHHHHHHHHHHhcCCCeE-EEEcCCcccccCCCcccChhH--HHHHHHHHhCCceeeccCCCHHHHHHHHHHhC-CCcc
Confidence 34567778888877 8887 777776655444444445443 332 12233445678999999999999999 9999
Q ss_pred ceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhh--hcCCcccCCHHHHHHHHhhh
Q 039449 192 EALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWR--KSGAIVLPDLVAVKEFLTSE 249 (253)
Q Consensus 192 ~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~--~~~~~~i~~l~el~~~l~~~ 249 (253)
+|++|||+..||+.+++.+|+.++++.+.......... ..++++++++.|+.++|.+.
T Consensus 209 ~~i~iGD~~~nDi~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~ 268 (271)
T 2x4d_A 209 QAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHPEVKADGYVDNLAEAVDLLLQH 268 (271)
T ss_dssp GEEEEESCTTTTHHHHHHTTCEEEEESSTTCCGGGGGCSSCCCSEEESSHHHHHHHHHHH
T ss_pred eEEEECCCcHHHHHHHHHCCCcEEEEcCCCCCchhhcccCCCCCEEeCCHHHHHHHHHhh
Confidence 99999999658999999999999999842222222221 23568999999999888653
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=99.87 E-value=2.7e-22 Score=147.99 Aligned_cols=121 Identities=19% Similarity=0.179 Sum_probs=94.4
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeecccc-CccCCCHHHHHHHHHHhCCCCCC
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLE-GVEKPDPRIYEIALERAGNIAPE 191 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~-~~~kp~~~~~~~~~~~~~~~~~~ 191 (253)
..++|++.++++.|++.|++++++||+....++.. +.+|+.. ++..+.+.+.. ...+|.+.....+++.+ +++
T Consensus 78 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~k~~~l~~l---~~~ 151 (201)
T 4ap9_A 78 VNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEF--MANRAIFEDGKFQGIRLRFRDKGEFLKRF---RDG 151 (201)
T ss_dssp CCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEE--EEEEEEEETTEEEEEECCSSCHHHHHGGG---TTS
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchh--heeeEEeeCCceECCcCCccCHHHHHHhc---CcC
Confidence 37889999999999999999999999999888888 9999987 55555444332 12355554445556555 589
Q ss_pred ceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHHHHHHhhh
Q 039449 192 EALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKEFLTSE 249 (253)
Q Consensus 192 ~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~~~l~~~ 249 (253)
++++|||+. ||+.+++.+|+++++.+. .. ..+++++|++|+.++|++.
T Consensus 152 ~~i~iGD~~-~Di~~~~~ag~~v~~~~~-~~--------~ad~v~~~~~el~~~l~~l 199 (201)
T 4ap9_A 152 FILAMGDGY-ADAKMFERADMGIAVGRE-IP--------GADLLVKDLKELVDFIKNL 199 (201)
T ss_dssp CEEEEECTT-CCHHHHHHCSEEEEESSC-CT--------TCSEEESSHHHHHHHHHTC
T ss_pred cEEEEeCCH-HHHHHHHhCCceEEECCC-Cc--------cccEEEccHHHHHHHHHHh
Confidence 999999999 999999999998555442 11 4678999999999999865
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=8.2e-22 Score=146.44 Aligned_cols=123 Identities=16% Similarity=0.216 Sum_probs=97.0
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccc----------cCccCCCHHHHHHHHH
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGL----------EGVEKPDPRIYEIALE 183 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~----------~~~~kp~~~~~~~~~~ 183 (253)
.+.|++.++++.++++|++++++|++....++..++.+|+.. +|...+.... ....++|+..+..+++
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~ 153 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDY--AFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAK 153 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSE--EEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCe--EEEeeeEEECCEEcCCcccCccCCccHHHHHHHHHH
Confidence 567999999999999999999999998877888888888876 6655433221 1224567899999999
Q ss_pred HhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCC--HHHHHHHH
Q 039449 184 RAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPD--LVAVKEFL 246 (253)
Q Consensus 184 ~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~--l~el~~~l 246 (253)
+++ +++++|++|||+. ||+.+++.+|+.+++ .. .+.+....++++++ +.+|..++
T Consensus 154 ~lg-i~~~~~~~iGD~~-~Di~~~~~ag~~~~~-~~-----~~~~~~~a~~v~~~~~~~~l~~~l 210 (211)
T 1l7m_A 154 IEG-INLEDTVAVGDGA-NDISMFKKAGLKIAF-CA-----KPILKEKADICIEKRDLREILKYI 210 (211)
T ss_dssp HHT-CCGGGEEEEECSG-GGHHHHHHCSEEEEE-SC-----CHHHHTTCSEEECSSCGGGGGGGC
T ss_pred HcC-CCHHHEEEEecCh-hHHHHHHHCCCEEEE-CC-----CHHHHhhcceeecchhHHHHHHhh
Confidence 999 9999999999999 999999999997554 21 13344556788888 88886554
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=99.86 E-value=8e-23 Score=150.63 Aligned_cols=184 Identities=14% Similarity=0.064 Sum_probs=124.7
Q ss_pred CceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHH
Q 039449 6 RLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFV 85 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (253)
++|+|+||+||||+|+...+..++..++++++ ....+.+ .+. +..+ .+.
T Consensus 3 ~~k~viFDlDGTL~Ds~~~~~~~~~~~~~~~~--~~~~~~~-----------------~~~----~~~~--------~~~ 51 (197)
T 1q92_A 3 RALRVLVDMDGVLADFEGGFLRKFRARFPDQP--FIALEDR-----------------RGF----WVSE--------QYG 51 (197)
T ss_dssp CCEEEEECSBTTTBCHHHHHHHHHHHHCTTSC--CCCGGGC-----------------CSS----CHHH--------HHH
T ss_pred CceEEEEeCCCCCccCcHHHHHHHHHHHhcCC--CCCHHHh-----------------cCC----cHHH--------HHH
Confidence 57899999999999999888888888877652 1222211 111 1111 111
Q ss_pred HcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHc-CCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeee
Q 039449 86 RAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREK-GLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVF 164 (253)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~ 164 (253)
.. +.+...... ..+..........++||+.++|+.|+++ |++++|+||+....++..++.+|+.. .+|+
T Consensus 52 ~~----~~~~~~~~~-~~~~~~~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~~-~~f~---- 121 (197)
T 1q92_A 52 RL----RPGLSEKAI-SIWESKNFFFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVE-KYFG---- 121 (197)
T ss_dssp HH----STTHHHHHH-HHHTSTTTTTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHH-HHHC----
T ss_pred hc----CHHHHHHHH-HHHHhhhhhhcCCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchHH-Hhch----
Confidence 11 112222222 2222211122457899999999999999 99999999999988888888888753 1332
Q ss_pred ccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccc----hhhhh-hcCCeEEEEcCCCCCChhhhhhcCCcccCCH
Q 039449 165 SGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKD----YVPAK-SVGMHALLVDRFKTPDAKEWRKSGAIVLPDL 239 (253)
Q Consensus 165 ~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~D----i~~a~-~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l 239 (253)
..++++++ ++++++++|||+. +| +.+|+ ++|+.+|++++.. +....+ .....++.||
T Consensus 122 --------------~~~~~~l~-~~~~~~~~vgDs~-~dD~~~~~~a~~~aG~~~i~~~~~~-~~~~~~-~~~~~~v~~~ 183 (197)
T 1q92_A 122 --------------PDFLEQIV-LTRDKTVVSADLL-IDDRPDITGAEPTPSWEHVLFTACH-NQHLQL-QPPRRRLHSW 183 (197)
T ss_dssp --------------GGGGGGEE-ECSCSTTSCCSEE-EESCSCCCCSCSSCSSEEEEECCTT-TTTCCC-CTTCEEECCT
T ss_pred --------------HHHHHHhc-cCCccEEEECccc-ccCCchhhhcccCCCceEEEecCcc-cccccc-cccchhhhhH
Confidence 45788899 9999999999999 89 99999 9999999998422 222111 1123579999
Q ss_pred -HHHHHHHhh
Q 039449 240 -VAVKEFLTS 248 (253)
Q Consensus 240 -~el~~~l~~ 248 (253)
+++..+|..
T Consensus 184 ~~~l~~~l~~ 193 (197)
T 1q92_A 184 ADDWKAILDS 193 (197)
T ss_dssp TSCHHHHHHT
T ss_pred HHHHHHHhcc
Confidence 588887763
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.6e-22 Score=144.44 Aligned_cols=107 Identities=21% Similarity=0.200 Sum_probs=89.0
Q ss_pred CChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEE
Q 039449 117 PDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHI 196 (253)
Q Consensus 117 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~i 196 (253)
|+..++|++|+++|++++++||++...++..++.+|+.. +|+. .||+++.+..+++.++ ++++++++|
T Consensus 39 ~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~--~~~~---------~kp~~~~~~~~~~~~~-~~~~~~~~v 106 (162)
T 2p9j_A 39 VLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE--IYTG---------SYKKLEIYEKIKEKYS-LKDEEIGFI 106 (162)
T ss_dssp HHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE--EEEC---------C--CHHHHHHHHHHTT-CCGGGEEEE
T ss_pred ccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh--hccC---------CCCCHHHHHHHHHHcC-CCHHHEEEE
Confidence 455799999999999999999999999999999999987 5542 6999999999999999 999999999
Q ss_pred cCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHH
Q 039449 197 GDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVA 241 (253)
Q Consensus 197 GD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~e 241 (253)
||+. +|+.+|+++|+++++.+. .+......+++++++.+
T Consensus 107 GD~~-~Di~~a~~ag~~~~~~~~-----~~~~~~~a~~v~~~~~~ 145 (162)
T 2p9j_A 107 GDDV-VDIEVMKKVGFPVAVRNA-----VEEVRKVAVYITQRNGG 145 (162)
T ss_dssp ECSG-GGHHHHHHSSEEEECTTS-----CHHHHHHCSEECSSCSS
T ss_pred CCCH-HHHHHHHHCCCeEEecCc-----cHHHHhhCCEEecCCCC
Confidence 9999 999999999999775432 23344557788888664
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=8.4e-22 Score=142.34 Aligned_cols=101 Identities=23% Similarity=0.288 Sum_probs=86.7
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCC---------------CcchhhhhhhhcCCCCCcceeEeeec-----cccCccC
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNA---------------EYRYQDVILPALGVNQGTEWDFGVFS-----GLEGVEK 172 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~---------------~~~~~~~~l~~~gl~~~~~f~~~~~~-----~~~~~~k 172 (253)
+.++||+.++|+.|+++|++++|+||+ ....+...++.+|+. |+.++++ .+.+..|
T Consensus 41 ~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~----fd~v~~s~~~~~~~~~~~K 116 (176)
T 2fpr_A 41 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ----FDEVLICPHLPADECDCRK 116 (176)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC----EEEEEEECCCGGGCCSSST
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC----eeEEEEcCCCCcccccccC
Confidence 378899999999999999999999998 455677888888875 7777655 6778889
Q ss_pred CCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcC
Q 039449 173 PDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDR 219 (253)
Q Consensus 173 p~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~ 219 (253)
|+|++|..++++++ +++++++||||+. +|+.+|+++|+.+|++.+
T Consensus 117 P~p~~~~~~~~~~g-i~~~~~l~VGD~~-~Di~~A~~aG~~~i~v~~ 161 (176)
T 2fpr_A 117 PKVKLVERYLAEQA-MDRANSYVIGDRA-TDIQLAENMGINGLRYDR 161 (176)
T ss_dssp TSCGGGGGGC-----CCGGGCEEEESSH-HHHHHHHHHTSEEEECBT
T ss_pred CCHHHHHHHHHHcC-CCHHHEEEEcCCH-HHHHHHHHcCCeEEEEcC
Confidence 99999999999999 9999999999999 999999999999999984
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=99.85 E-value=3.1e-21 Score=140.89 Aligned_cols=98 Identities=11% Similarity=0.200 Sum_probs=89.0
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCC-cchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCC
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAE-YRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPE 191 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~-~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 191 (253)
..++|++.++|+.|+++|++++++||+. ...++..++.+|+.. +|+.++... +|+++.+..++++++ ++++
T Consensus 67 ~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~--~f~~~~~~~-----~~k~~~~~~~~~~~~-~~~~ 138 (187)
T 2wm8_A 67 VRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFR--YFVHREIYP-----GSKITHFERLQQKTG-IPFS 138 (187)
T ss_dssp ECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTT--TEEEEEESS-----SCHHHHHHHHHHHHC-CCGG
T ss_pred cCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHh--hcceeEEEe-----CchHHHHHHHHHHcC-CChH
Confidence 4788999999999999999999999999 588899999999998 888764432 578899999999999 9999
Q ss_pred ceEEEcCCcccchhhhhhcCCeEEEEcC
Q 039449 192 EALHIGDSFRKDYVPAKSVGMHALLVDR 219 (253)
Q Consensus 192 ~~~~iGD~~~~Di~~a~~~G~~~i~~~~ 219 (253)
+|++|||+. +|+.+|+++|+.++++.+
T Consensus 139 ~~~~igD~~-~Di~~a~~aG~~~i~v~~ 165 (187)
T 2wm8_A 139 QMIFFDDER-RNIVDVSKLGVTCIHIQN 165 (187)
T ss_dssp GEEEEESCH-HHHHHHHTTTCEEEECSS
T ss_pred HEEEEeCCc-cChHHHHHcCCEEEEECC
Confidence 999999999 999999999999999984
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.85 E-value=7.4e-21 Score=151.35 Aligned_cols=128 Identities=13% Similarity=0.154 Sum_probs=105.4
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeee----------ccccCccCCCHHHHHHHH
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVF----------SGLEGVEKPDPRIYEIAL 182 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~----------~~~~~~~kp~~~~~~~~~ 182 (253)
.+++||+.++++.|++.|++++++||+....++.+++.+|+.. +|...+. ++.....||+++++..++
T Consensus 177 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~--~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~~ 254 (335)
T 3n28_A 177 LPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDY--AQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTLA 254 (335)
T ss_dssp CCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSE--EEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHHH
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCe--EEeeeeEeeCCeeeeeecccccChhhhHHHHHHHH
Confidence 4788999999999999999999999999999999999999987 7765432 234455699999999999
Q ss_pred HHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCC--cccCCHHHHHHHHhhhh
Q 039449 183 ERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGA--IVLPDLVAVKEFLTSEI 250 (253)
Q Consensus 183 ~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~--~~i~~l~el~~~l~~~~ 250 (253)
++++ +++++|++|||+. ||+.+++.+|+++++ +. .+......+ ....+++++..+|+..+
T Consensus 255 ~~lg-i~~~~~v~vGDs~-nDi~~a~~aG~~va~-~~-----~~~~~~~a~~v~~~~~l~~v~~~L~~~l 316 (335)
T 3n28_A 255 QQYD-VEIHNTVAVGDGA-NDLVMMAAAGLGVAY-HA-----KPKVEAKAQTAVRFAGLGGVVCILSAAL 316 (335)
T ss_dssp HHHT-CCGGGEEEEECSG-GGHHHHHHSSEEEEE-SC-----CHHHHTTSSEEESSSCTHHHHHHHHHHH
T ss_pred HHcC-CChhhEEEEeCCH-HHHHHHHHCCCeEEe-CC-----CHHHHhhCCEEEecCCHHHHHHHHHhHH
Confidence 9999 9999999999999 999999999999888 42 122223333 46678999998887654
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.85 E-value=3.1e-22 Score=155.80 Aligned_cols=120 Identities=18% Similarity=0.255 Sum_probs=97.7
Q ss_pred ChHHHHHHHHHcCCEEEEEeCCCcchh--h--hhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHh----CCCC
Q 039449 118 DSQPFLRWAREKGLIVGIISNAEYRYQ--D--VILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERA----GNIA 189 (253)
Q Consensus 118 ~~~~~l~~l~~~g~~~~i~s~~~~~~~--~--~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~----~~~~ 189 (253)
....+++.|+++|++ +++||.+.... . ..+...++.. +|+.++.++..+..||+|++|..+++++ + ++
T Consensus 149 ~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~~~~~~~~~l~~--~f~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~-~~ 224 (284)
T 2hx1_A 149 DLNKTVNLLRKRTIP-AIVANTDNTYPLTKTDVAIAIGGVAT--MIESILGRRFIRFGKPDSQMFMFAYDMLRQKME-IS 224 (284)
T ss_dssp HHHHHHHHHHHCCCC-EEEECCCSEEECSSSCEEECHHHHHH--HHHHHHCSCEEEESTTSSHHHHHHHHHHHTTSC-CC
T ss_pred cHHHHHHHHhcCCCe-EEEECCCccccCcCCCccccCChHHH--HHHHHhCCceeEecCCCHHHHHHHHHHHhhccC-CC
Confidence 456677789899999 99999988766 3 2346677877 8888888888888999999999999999 9 99
Q ss_pred CCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhh-------hcCCcccCCHHHH
Q 039449 190 PEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWR-------KSGAIVLPDLVAV 242 (253)
Q Consensus 190 ~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~-------~~~~~~i~~l~el 242 (253)
+++|+||||++.+|+.+|+++|+.++++.+ +......+. ..++++++++.||
T Consensus 225 ~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~-g~~~~~~l~~~~~~~~~~pd~~~~~l~el 283 (284)
T 2hx1_A 225 KREILMVGDTLHTDILGGNKFGLDTALVLT-GNTRIDDAETKIKSTGIVPTHICESAVIE 283 (284)
T ss_dssp GGGEEEEESCTTTHHHHHHHHTCEEEEESS-SSSCGGGHHHHHHHHTCCCSEEESCSCCC
T ss_pred cceEEEECCCcHHHHHHHHHcCCeEEEECC-CCCCHHHHHhhhhccCCCCCEEccchhhh
Confidence 999999999954899999999999999994 444444433 3466899988765
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.84 E-value=8.1e-22 Score=142.41 Aligned_cols=108 Identities=18% Similarity=0.147 Sum_probs=91.0
Q ss_pred HHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcc
Q 039449 122 FLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFR 201 (253)
Q Consensus 122 ~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~ 201 (253)
+|+.|+++|++++++|+.....++.+++.+|+. +|.. .|||++.+..++++++ ++++++++|||+.
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~---~~~~---------~~~k~~~l~~~~~~~~-~~~~~~~~vGD~~- 112 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP---VLHG---------IDRKDLALKQWCEEQG-IAPERVLYVGNDV- 112 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC---EEES---------CSCHHHHHHHHHHHHT-CCGGGEEEEECSG-
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe---eEeC---------CCChHHHHHHHHHHcC-CCHHHEEEEcCCH-
Confidence 899999999999999999999999999999986 2321 2899999999999999 9999999999999
Q ss_pred cchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCC------HHHHHHHHhh
Q 039449 202 KDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPD------LVAVKEFLTS 248 (253)
Q Consensus 202 ~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~------l~el~~~l~~ 248 (253)
||+.+++.+|+.+++.+. .+......++++.+ +.++.++|..
T Consensus 113 nD~~~~~~ag~~v~~~~~-----~~~~~~~ad~v~~~~~~~g~~~~l~~~l~~ 160 (176)
T 3mmz_A 113 NDLPCFALVGWPVAVASA-----HDVVRGAARAVTTVPGGDGAIREIASWILG 160 (176)
T ss_dssp GGHHHHHHSSEEEECTTC-----CHHHHHHSSEECSSCTTTTHHHHHHHHHHT
T ss_pred HHHHHHHHCCCeEECCCh-----hHHHHHhCCEEecCCCCCcHHHHHHHHHHH
Confidence 999999999988765431 23344556788888 8888887754
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=7.5e-21 Score=135.96 Aligned_cols=108 Identities=22% Similarity=0.221 Sum_probs=90.6
Q ss_pred HHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcc
Q 039449 122 FLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFR 201 (253)
Q Consensus 122 ~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~ 201 (253)
+++.|+++|++++++||.....++..++.+|+.. +|.. .||+++++..++++++ ++++++++|||+.
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~--~~~~---------~kpk~~~~~~~~~~~~-~~~~~~~~vGD~~- 105 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY--LFQG---------VVDKLSAAEELCNELG-INLEQVAYIGDDL- 105 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE--EECS---------CSCHHHHHHHHHHHHT-CCGGGEEEECCSG-
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE--eecc---------cCChHHHHHHHHHHcC-CCHHHEEEECCCH-
Confidence 7899999999999999999999999999999987 5443 2999999999999999 9999999999999
Q ss_pred cchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCC------HHHHHHHHh
Q 039449 202 KDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPD------LVAVKEFLT 247 (253)
Q Consensus 202 ~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~------l~el~~~l~ 247 (253)
+|+.+++++|+.+++.+. .+......++++.+ +.++.+.+.
T Consensus 106 ~Di~~~~~ag~~~~~~~~-----~~~~~~~ad~v~~~~~~~g~~~e~~~~ll 152 (164)
T 3e8m_A 106 NDAKLLKRVGIAGVPASA-----PFYIRRLSTIFLEKRGGEGVFREFVEKVL 152 (164)
T ss_dssp GGHHHHTTSSEEECCTTS-----CHHHHTTCSSCCCCCTTTTHHHHHHHHHT
T ss_pred HHHHHHHHCCCeEEcCCh-----HHHHHHhCcEEeccCCCCcHHHHHHHHHH
Confidence 999999999998776442 23344556677777 667666553
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.3e-21 Score=150.66 Aligned_cols=128 Identities=21% Similarity=0.284 Sum_probs=102.2
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchh--hhhhhh-cCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCC
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQ--DVILPA-LGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIA 189 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~--~~~l~~-~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~ 189 (253)
..++|++.++++.|+ +|+++ ++||.+.... ...+.. .++.. +|+.++.+......||+|.+|+.++++ ++
T Consensus 129 ~~~~~~~~~~l~~L~-~g~~~-i~tn~~~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~~KP~~~~~~~~~~~---~~ 201 (263)
T 1zjj_A 129 DLTYEKLKYATLAIR-NGATF-IGTNPDATLPGEEGIYPGAGSIIA--ALKVATNVEPIIIGKPNEPMYEVVREM---FP 201 (263)
T ss_dssp TCBHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHH--HHHHHHCCCCEECSTTSHHHHHHHHHH---ST
T ss_pred CCCHHHHHHHHHHHH-CCCEE-EEECCCccccCCCCCcCCcHHHHH--HHHHHhCCCccEecCCCHHHHHHHHHh---CC
Confidence 356889999999999 89998 9999988665 344444 55665 777777777777889999999999998 57
Q ss_pred CCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhh---cCCcccCCHHHHHHHHhh
Q 039449 190 PEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRK---SGAIVLPDLVAVKEFLTS 248 (253)
Q Consensus 190 ~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~---~~~~~i~~l~el~~~l~~ 248 (253)
+++++||||++.+|+.+|+++|+.++++.+ +....+.+.. .++++++++.|+.++|.+
T Consensus 202 ~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~-g~~~~~~~~~~~~~p~~~~~~l~el~~~l~~ 262 (263)
T 1zjj_A 202 GEELWMVGDRLDTDIAFAKKFGMKAIMVLT-GVSSLEDIKKSEYKPDLVLPSVYELIDYLKT 262 (263)
T ss_dssp TCEEEEEESCTTTHHHHHHHTTCEEEEESS-SSCCHHHHTTCSSCCSEEESSGGGGGGGGC-
T ss_pred cccEEEECCChHHHHHHHHHcCCeEEEECC-CCCChHHHHhcCCCCCEEECCHHHHHHHHhh
Confidence 999999999954899999999999999984 5444444433 466899999999877654
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.83 E-value=4.8e-21 Score=149.16 Aligned_cols=116 Identities=18% Similarity=0.213 Sum_probs=92.9
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCc
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEE 192 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 192 (253)
..++||+.++|+.|+++|++++++||+....++..++.+|+.. +|+.++ . .+| ..+++.++ .+ ++
T Consensus 162 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~--~f~~i~-----~--~~K----~~~~~~l~-~~-~~ 226 (287)
T 3a1c_A 162 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL--VIAEVL-----P--HQK----SEEVKKLQ-AK-EV 226 (287)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE--EECSCC-----T--TCH----HHHHHHHT-TT-CC
T ss_pred cccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCce--eeeecC-----h--HHH----HHHHHHHh-cC-Ce
Confidence 3789999999999999999999999999999999999999987 665432 1 222 57888999 88 99
Q ss_pred eEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCccc--CCHHHHHHHHhhh
Q 039449 193 ALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVL--PDLVAVKEFLTSE 249 (253)
Q Consensus 193 ~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i--~~l~el~~~l~~~ 249 (253)
|++|||+. +|+.+++++|+..++-+ ... .....+++++ .++.++..++...
T Consensus 227 ~~~vGDs~-~Di~~a~~ag~~v~~~~--~~~---~~~~~ad~v~~~~~~~~l~~~l~~~ 279 (287)
T 3a1c_A 227 VAFVGDGI-NDAPALAQADLGIAVGS--GSD---VAVESGDIVLIRDDLRDVVAAIQLS 279 (287)
T ss_dssp EEEEECTT-TCHHHHHHSSEEEEECC--CSC---CSSCCSSEEESSSCTHHHHHHHHTT
T ss_pred EEEEECCH-HHHHHHHHCCeeEEeCC--CCH---HHHhhCCEEEeCCCHHHHHHHHHHH
Confidence 99999999 99999999999844422 211 1123456888 9999999988754
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.83 E-value=9.1e-21 Score=138.49 Aligned_cols=109 Identities=16% Similarity=0.173 Sum_probs=91.4
Q ss_pred HHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcc
Q 039449 122 FLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFR 201 (253)
Q Consensus 122 ~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~ 201 (253)
+|++|+++|++++++||.....++..++.+|+.. +|+.+ ++|++.+..++++++ +++++|++|||+.
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~--~f~~~---------~~K~~~~~~~~~~~g-~~~~~~~~vGD~~- 120 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH--LFQGR---------EDKLVVLDKLLAELQ-LGYEQVAYLGDDL- 120 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE--EECSC---------SCHHHHHHHHHHHHT-CCGGGEEEEECSG-
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH--HhcCc---------CChHHHHHHHHHHcC-CChhHEEEECCCH-
Confidence 8899999999999999999999999999999987 55542 677899999999999 9999999999999
Q ss_pred cchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCC------HHHHHHHHhh
Q 039449 202 KDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPD------LVAVKEFLTS 248 (253)
Q Consensus 202 ~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~------l~el~~~l~~ 248 (253)
||+.+++++|+.+++.+. .+......++++.+ +.++.+++..
T Consensus 121 nDi~~~~~ag~~~~~~~~-----~~~~~~~ad~v~~~~~~~G~~~~l~~~l~~ 168 (189)
T 3mn1_A 121 PDLPVIRRVGLGMAVANA-----ASFVREHAHGITRAQGGEGAAREFCELILS 168 (189)
T ss_dssp GGHHHHHHSSEEEECTTS-----CHHHHHTSSEECSSCTTTTHHHHHHHHHHH
T ss_pred HHHHHHHHCCCeEEeCCc-----cHHHHHhCCEEecCCCCCcHHHHHHHHHHH
Confidence 999999999998765431 23344556677777 7888777754
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=99.83 E-value=6.9e-21 Score=146.61 Aligned_cols=120 Identities=19% Similarity=0.161 Sum_probs=83.5
Q ss_pred CChHHHHHHHHHcCCEEEEEeCCCcchhhh---hhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCce
Q 039449 117 PDSQPFLRWAREKGLIVGIISNAEYRYQDV---ILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEA 193 (253)
Q Consensus 117 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~---~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 193 (253)
+++.+.+..++ .|.++ ++||.+...... .....++.. +|+.++........||++.+++.++++++ ++++++
T Consensus 128 ~~~~~~~~~l~-~~~~~-i~~n~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~-~~~~~~ 202 (264)
T 3epr_A 128 DKLATATLAIQ-NGALF-IGTNPDLNIPTERGLLPGAGSLNA--LLEAATRIKPVFIGKPNAIIMNKALEILN-IPRNQA 202 (264)
T ss_dssp HHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHH--HHHHHHSCCCEECSTTSHHHHHHHHHHHT-SCGGGE
T ss_pred HHHHHHHHHHH-CCCeE-EEEcCCccccCCCceecCccHHHH--HHHHHhCCCcccCCCCCHHHHHHHHHHhC-cCcccE
Confidence 34445555553 45544 567765432111 111112323 45555555667788999999999999999 999999
Q ss_pred EEEcCC-cccchhhhhhcCCeEEEEcCCCCCChhhhhh---cCCcccCCHHHHH
Q 039449 194 LHIGDS-FRKDYVPAKSVGMHALLVDRFKTPDAKEWRK---SGAIVLPDLVAVK 243 (253)
Q Consensus 194 ~~iGD~-~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~---~~~~~i~~l~el~ 243 (253)
++|||+ . +|+.+|+++|++++++. ++....+.+.. .++++++|+.||.
T Consensus 203 ~~vGD~~~-~Di~~a~~aG~~~~~v~-~g~~~~~~~~~~~~~pd~~~~~l~~l~ 254 (264)
T 3epr_A 203 VMVGDNYL-TDIMAGINNDIDTLLVT-TGFTTVEEVPDLPIQPSYVLASLDEWT 254 (264)
T ss_dssp EEEESCTT-THHHHHHHHTCEEEEET-TSSSCGGGGGGCSSCCSEEESCGGGCC
T ss_pred EEECCCcH-HHHHHHHHCCCeEEEEC-CCCCChHHHHhcCCCCCEEECCHHHHh
Confidence 999999 6 99999999999999998 45444444443 4678999998874
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=99.81 E-value=7.2e-21 Score=141.24 Aligned_cols=96 Identities=14% Similarity=0.175 Sum_probs=78.8
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeecc---ccCccCCCHHHHHHHHHHhCCCCC
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSG---LEGVEKPDPRIYEIALERAGNIAP 190 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~---~~~~~kp~~~~~~~~~~~~~~~~~ 190 (253)
.+.|++.++|+.|+++|++++++||+.....+..++. +.. +|+.++.+. ..+..||+|+.+..++++++ +
T Consensus 88 ~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~--l~~--~f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g-~-- 160 (211)
T 2b82_A 88 IPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKT--LAD--NFHIPATNMNPVIFAGDKPGQNTKSQWLQDKN-I-- 160 (211)
T ss_dssp EECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHH--HHH--HTTCCTTTBCCCEECCCCTTCCCSHHHHHHTT-E--
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH--HHH--hcCccccccchhhhcCCCCCHHHHHHHHHHCC-C--
Confidence 4567999999999999999999999988776666665 333 454432221 24457999999999999999 7
Q ss_pred CceEEEcCCcccchhhhhhcCCeEEEEcC
Q 039449 191 EEALHIGDSFRKDYVPAKSVGMHALLVDR 219 (253)
Q Consensus 191 ~~~~~iGD~~~~Di~~a~~~G~~~i~~~~ 219 (253)
|++|||+. +|+.+|+++|+++|++.+
T Consensus 161 --~l~VGDs~-~Di~aA~~aG~~~i~v~~ 186 (211)
T 2b82_A 161 --RIFYGDSD-NDITAARDVGARGIRILR 186 (211)
T ss_dssp --EEEEESSH-HHHHHHHHTTCEEEECCC
T ss_pred --EEEEECCH-HHHHHHHHCCCeEEEEec
Confidence 99999999 999999999999999984
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.81 E-value=7.5e-20 Score=135.41 Aligned_cols=108 Identities=18% Similarity=0.182 Sum_probs=88.9
Q ss_pred HHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcc
Q 039449 122 FLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFR 201 (253)
Q Consensus 122 ~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~ 201 (253)
+|+.|+++|++++|+|+.....++..++.+|+.. +|..+ |||++.+..++++++ +++++|++|||+.
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~--~f~~~---------k~K~~~l~~~~~~lg-~~~~~~~~vGDs~- 150 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH--LYQGQ---------SDKLVAYHELLATLQ-CQPEQVAYIGDDL- 150 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE--EECSC---------SSHHHHHHHHHHHHT-CCGGGEEEEECSG-
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch--hhccc---------CChHHHHHHHHHHcC-cCcceEEEEcCCH-
Confidence 8999999999999999999999999999999987 55432 889999999999999 9999999999999
Q ss_pred cchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCC------HHHHHHHHh
Q 039449 202 KDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPD------LVAVKEFLT 247 (253)
Q Consensus 202 ~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~------l~el~~~l~ 247 (253)
||+.+++++|+.+++.+. .+......++++.+ +.|+.+.+.
T Consensus 151 nDi~~~~~ag~~~a~~~~-----~~~~~~~Ad~v~~~~~~~G~v~e~~~~ll 197 (211)
T 3ij5_A 151 IDWPVMAQVGLSVAVADA-----HPLLLPKAHYVTRIKGGRGAVREVCDLIL 197 (211)
T ss_dssp GGHHHHTTSSEEEECTTS-----CTTTGGGSSEECSSCTTTTHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEeCCc-----cHHHHhhCCEEEeCCCCCcHHHHHHHHHH
Confidence 999999999998776542 12223445666665 366666654
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.81 E-value=2.9e-20 Score=135.93 Aligned_cols=109 Identities=17% Similarity=0.208 Sum_probs=90.5
Q ss_pred HHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcc
Q 039449 122 FLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFR 201 (253)
Q Consensus 122 ~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~ 201 (253)
.|+.|++.|++++++||++...++..++.+|+.. +|+.+ ||+++++..+++.++ ++++++++|||+.
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~--~~~~~---------kpk~~~~~~~~~~~~-~~~~~~~~vGD~~- 120 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH--YYKGQ---------VDKRSAYQHLKKTLG-LNDDEFAYIGDDL- 120 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE--EECSC---------SSCHHHHHHHHHHHT-CCGGGEEEEECSG-
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc--ceeCC---------CChHHHHHHHHHHhC-CCHHHEEEECCCH-
Confidence 4788999999999999999999999999999987 55432 899999999999999 9999999999999
Q ss_pred cchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCC------HHHHHHHHhh
Q 039449 202 KDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPD------LVAVKEFLTS 248 (253)
Q Consensus 202 ~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~------l~el~~~l~~ 248 (253)
||+.+++.+|+.+++.+. .+......++++.+ +.++.+++..
T Consensus 121 ~Di~~~~~ag~~~~~~~~-----~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~ 168 (191)
T 3n1u_A 121 PDLPLIQQVGLGVAVSNA-----VPQVLEFADWRTERTGGRGAVRELCDLILN 168 (191)
T ss_dssp GGHHHHHHSSEEEECTTC-----CHHHHHHSSEECSSCTTTTHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEeCCc-----cHHHHHhCCEEecCCCCCcHHHHHHHHHHH
Confidence 999999999999754331 23444556677777 6677766653
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.81 E-value=3e-20 Score=135.97 Aligned_cols=110 Identities=17% Similarity=0.213 Sum_probs=89.8
Q ss_pred HHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCc
Q 039449 121 PFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSF 200 (253)
Q Consensus 121 ~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~ 200 (253)
..|+.|++.|++++|+||+....++.+++.+|+.. +|.. .||++.++..++++++ ++++++++|||+.
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~--~~~~---------~k~k~~~~~~~~~~~~-~~~~~~~~vGD~~ 126 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISL--IYQG---------QDDKVQAYYDICQKLA-IAPEQTGYIGDDL 126 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE--EECS---------CSSHHHHHHHHHHHHC-CCGGGEEEEESSG
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE--EeeC---------CCCcHHHHHHHHHHhC-CCHHHEEEEcCCH
Confidence 35888999999999999999999999999999987 4432 2899999999999999 9999999999999
Q ss_pred ccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCC------HHHHHHHHhh
Q 039449 201 RKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPD------LVAVKEFLTS 248 (253)
Q Consensus 201 ~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~------l~el~~~l~~ 248 (253)
||+.+++++|+.+++.+. .+......++++.+ +.++.+++.+
T Consensus 127 -nDi~~~~~ag~~va~~na-----~~~~~~~ad~v~~~~~~~G~~~~~~~~il~ 174 (195)
T 3n07_A 127 -IDWPVMEKVALRVCVADG-----HPLLAQRANYVTHIKGGHGAVREVCDLILQ 174 (195)
T ss_dssp -GGHHHHTTSSEEEECTTS-----CHHHHHHCSEECSSCTTTTHHHHHHHHHHH
T ss_pred -HHHHHHHHCCCEEEECCh-----HHHHHHhCCEEEcCCCCCCHHHHHHHHHHH
Confidence 999999999998776432 23445556666665 4566666543
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.81 E-value=3e-20 Score=143.18 Aligned_cols=125 Identities=17% Similarity=0.152 Sum_probs=85.9
Q ss_pred CCChHHHHHHHHHcCCEEEEEeCCCcchhhh---hhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCc
Q 039449 116 FPDSQPFLRWAREKGLIVGIISNAEYRYQDV---ILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEE 192 (253)
Q Consensus 116 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~---~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 192 (253)
++++.+.+..++. +. ..++||.+...... .....++.. +|+.++........||++.+++.+++.+| +++++
T Consensus 128 ~~~~~~~~~~l~~-~~-~~i~~n~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~kp~~~~~~~~~~~lg-i~~~~ 202 (266)
T 3pdw_A 128 YEKFAVGCLAIRN-GA-RFISTNGDIAIPTERGLLPGNGSLTS--VLTVSTGVQPVFIGKPESIIMEQAMRVLG-TDVSE 202 (266)
T ss_dssp HHHHHHHHHHHHT-TC-EEEESCCCCEEEETTEEEECHHHHHH--HHHHHHCCCCEECSTTSSHHHHHHHHHHT-CCGGG
T ss_pred HHHHHHHHHHHHC-CC-eEEEEcCCceeECCCceEecchHHHH--HHHHHhCCCccccCCCCHHHHHHHHHHcC-CChhh
Confidence 3445555566654 44 34667766533211 111112333 45554555666778999999999999999 99999
Q ss_pred eEEEcCC-cccchhhhhhcCCeEEEEcCCCCCChhhhhh---cCCcccCCHHHHHHHHh
Q 039449 193 ALHIGDS-FRKDYVPAKSVGMHALLVDRFKTPDAKEWRK---SGAIVLPDLVAVKEFLT 247 (253)
Q Consensus 193 ~~~iGD~-~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~---~~~~~i~~l~el~~~l~ 247 (253)
+++|||+ . ||+.+++.+|+.++++++ +....+.+.. .++++++++.||.+-++
T Consensus 203 ~~~iGD~~~-~Di~~~~~aG~~~~~v~~-g~~~~~~~~~~~~~~d~v~~~~~el~~~~~ 259 (266)
T 3pdw_A 203 TLMVGDNYA-TDIMAGINAGMDTLLVHT-GVTKREHMTDDMEKPTHAIDSLTEWIPYIE 259 (266)
T ss_dssp EEEEESCTT-THHHHHHHHTCEEEEECC-C------CCTTSCCCSEEESSGGGGHHHHH
T ss_pred EEEECCCcH-HHHHHHHHCCCeEEEECC-CCCChHHHHhcCCCCCEEeCCHHHHHHHhh
Confidence 9999999 7 999999999999999994 5444444444 37799999999988775
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=3.6e-20 Score=134.33 Aligned_cols=103 Identities=15% Similarity=0.118 Sum_probs=86.8
Q ss_pred hHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcC
Q 039449 119 SQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGD 198 (253)
Q Consensus 119 ~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD 198 (253)
..++|++|+++|++++++||.....+...++.+|+.. +|.. .||+++.++.++++++ ++++++++|||
T Consensus 40 ~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~--~~~~---------~k~k~~~~~~~~~~~~-~~~~~~~~vGD 107 (180)
T 1k1e_A 40 DGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--FFLG---------KLEKETACFDLMKQAG-VTAEQTAYIGD 107 (180)
T ss_dssp HHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE--EEES---------CSCHHHHHHHHHHHHT-CCGGGEEEEEC
T ss_pred hHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce--eecC---------CCCcHHHHHHHHHHcC-CCHHHEEEECC
Confidence 3478999999999999999999999999999999987 5532 4899999999999999 99999999999
Q ss_pred CcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCH
Q 039449 199 SFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDL 239 (253)
Q Consensus 199 ~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l 239 (253)
+. ||+.+++++|+.+++.+. .+......++++.+.
T Consensus 108 ~~-~Di~~~~~ag~~~~~~~~-----~~~~~~~ad~v~~~~ 142 (180)
T 1k1e_A 108 DS-VDLPAFAACGTSFAVADA-----PIYVKNAVDHVLSTH 142 (180)
T ss_dssp SG-GGHHHHHHSSEEEECTTS-----CHHHHTTSSEECSSC
T ss_pred CH-HHHHHHHHcCCeEEeCCc-----cHHHHhhCCEEecCC
Confidence 99 999999999999886431 233445566777764
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=7.2e-21 Score=147.63 Aligned_cols=114 Identities=12% Similarity=0.099 Sum_probs=84.6
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCce
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEA 193 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 193 (253)
.++|++.++|+.|++.|++++++||.....++..++.+|+.. +|+.++..+ +....+...+ .-++
T Consensus 144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~--~f~~~~~~~-------k~~~~k~~~~------~~~~ 208 (280)
T 3skx_A 144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDD--YFAEVLPHE-------KAEKVKEVQQ------KYVT 208 (280)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE--EECSCCGGG-------HHHHHHHHHT------TSCE
T ss_pred CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChh--HhHhcCHHH-------HHHHHHHHHh------cCCE
Confidence 578999999999999999999999999999999999999988 776654332 2223332222 2278
Q ss_pred EEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCccc--CCHHHHHHHHhh
Q 039449 194 LHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVL--PDLVAVKEFLTS 248 (253)
Q Consensus 194 ~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i--~~l~el~~~l~~ 248 (253)
++|||+. ||+.+++.+|+.+++.+. .. . .....++++ .+++++..+++.
T Consensus 209 ~~vGD~~-nDi~~~~~Ag~~va~~~~--~~--~-~~~~a~~~~~~~~~~~l~~~l~~ 259 (280)
T 3skx_A 209 AMVGDGV-NDAPALAQADVGIAIGAG--TD--V-AVETADIVLVRNDPRDVAAIVEL 259 (280)
T ss_dssp EEEECTT-TTHHHHHHSSEEEECSCC--SS--S-CCCSSSEECSSCCTHHHHHHHHH
T ss_pred EEEeCCc-hhHHHHHhCCceEEecCC--cH--H-HHhhCCEEEeCCCHHHHHHHHHH
Confidence 9999999 999999999986665431 11 1 122334444 899999988864
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.80 E-value=2.2e-19 Score=138.48 Aligned_cols=78 Identities=23% Similarity=0.291 Sum_probs=64.4
Q ss_pred cCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhh-------hcCCcccCCHH
Q 039449 168 EGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWR-------KSGAIVLPDLV 240 (253)
Q Consensus 168 ~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~-------~~~~~~i~~l~ 240 (253)
....||++.+++.++++++ ++++++++|||++.+|+.+|+++|++++++.+ +....+.+. ..++++++++.
T Consensus 183 ~~~~kp~~~~~~~~~~~~~-~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~-g~~~~~~~~~~~~~~~~~~d~v~~~~~ 260 (268)
T 3qgm_A 183 VVVGKPSEVIMREALDILG-LDAKDVAVVGDQIDVDVAAGKAIGAETVLVLT-GVTTRENLDQMIERHGLKPDYVFNSLK 260 (268)
T ss_dssp EECSTTSHHHHHHHHHHHT-CCGGGEEEEESCTTTHHHHHHHHTCEEEEESS-SSCCTTTHHHHHHHHTCCCSEEESSHH
T ss_pred eecCCCCHHHHHHHHHHhC-CCchhEEEECCCchHHHHHHHHCCCcEEEECC-CCCCHHHHHhhccccCCCCCEEECCHH
Confidence 5568999999999999999 99999999999933999999999999999984 433333332 24679999999
Q ss_pred HHHHHHh
Q 039449 241 AVKEFLT 247 (253)
Q Consensus 241 el~~~l~ 247 (253)
||.++|+
T Consensus 261 el~~~l~ 267 (268)
T 3qgm_A 261 DMVEALE 267 (268)
T ss_dssp HHHHTC-
T ss_pred HHHHHHh
Confidence 9998764
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=2.8e-21 Score=148.49 Aligned_cols=116 Identities=15% Similarity=0.180 Sum_probs=95.0
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCc
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEE 192 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 192 (253)
..++||+.++|+.|++.|++++++||++...++.+++.+|+.. +|+.++ |+.+..++++++ .++++
T Consensus 135 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~--~f~~~~-----------p~~k~~~~~~l~-~~~~~ 200 (263)
T 2yj3_A 135 DVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE--YYSNLS-----------PEDKVRIIEKLK-QNGNK 200 (263)
Confidence 3688999999999999999999999999999999999999988 776654 345567899999 99999
Q ss_pred eEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCccc--CCHHHHHHHHhh
Q 039449 193 ALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVL--PDLVAVKEFLTS 248 (253)
Q Consensus 193 ~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i--~~l~el~~~l~~ 248 (253)
|+||||+. ||+.+++++|+..++.. +. ......+++++ +++.++..++..
T Consensus 201 ~~~VGD~~-~D~~aa~~Agv~va~g~--~~---~~~~~~ad~v~~~~~l~~l~~~l~~ 252 (263)
T 2yj3_A 201 VLMIGDGV-NDAAALALADVSVAMGN--GV---DISKNVADIILVSNDIGTLLGLIKN 252 (263)
Confidence 99999999 99999999998766643 11 11123456778 899999887753
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=3.8e-18 Score=124.50 Aligned_cols=100 Identities=20% Similarity=0.246 Sum_probs=84.3
Q ss_pred HHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcc
Q 039449 122 FLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFR 201 (253)
Q Consensus 122 ~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~ 201 (253)
+|+.|++.|++++++||++...++..++.+|+.. +|. ..||+++.++.++++++ ++++++++|||+.
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~--~~~---------~~kpk~~~~~~~~~~~g-~~~~~~~~iGD~~- 127 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITH--LYQ---------GQSNKLIAFSDLLEKLA-IAPENVAYVGDDL- 127 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE--EEC---------SCSCSHHHHHHHHHHHT-CCGGGEEEEESSG-
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce--eec---------CCCCCHHHHHHHHHHcC-CCHHHEEEECCCH-
Confidence 8899999999999999999999999999999986 442 25999999999999999 9999999999999
Q ss_pred cchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCH
Q 039449 202 KDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDL 239 (253)
Q Consensus 202 ~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l 239 (253)
+|+.+++++|+.+++.+. . +......++++++.
T Consensus 128 ~Di~~a~~ag~~~~~~~~--~---~~~~~~ad~v~~~~ 160 (188)
T 2r8e_A 128 IDWPVMEKVGLSVAVADA--H---PLLIPRADYVTRIA 160 (188)
T ss_dssp GGHHHHTTSSEEEECTTS--C---TTTGGGSSEECSSC
T ss_pred HHHHHHHHCCCEEEecCc--C---HHHHhcCCEEEeCC
Confidence 999999999999876442 1 12233466778775
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.77 E-value=8.2e-20 Score=142.45 Aligned_cols=127 Identities=16% Similarity=0.161 Sum_probs=95.1
Q ss_pred cCCChHHHHHHHHHc-CCEEEEEeCC---------------------CcchhhhhhhhcCCCCCcceeEe----------
Q 039449 115 VFPDSQPFLRWAREK-GLIVGIISNA---------------------EYRYQDVILPALGVNQGTEWDFG---------- 162 (253)
Q Consensus 115 ~~~~~~~~l~~l~~~-g~~~~i~s~~---------------------~~~~~~~~l~~~gl~~~~~f~~~---------- 162 (253)
+.+++.++++.+++. |+++++.|+. ....+...++..|+.. +|...
T Consensus 123 ~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~--~~~~~~~~~~~~~~~ 200 (289)
T 3gyg_A 123 SKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSV--NINRCNPLAGDPEDS 200 (289)
T ss_dssp CHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEE--EEEECCGGGTCCTTE
T ss_pred CHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCE--EEEEccccccCCCCc
Confidence 456888999999887 8888888876 3344556667777765 55443
Q ss_pred eeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHH-
Q 039449 163 VFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVA- 241 (253)
Q Consensus 163 ~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~e- 241 (253)
...+.....++|+.++..++++++ +++++|++|||+. ||+.+++.+|+.+++-+ . .+.+....++++++..+
T Consensus 201 ~~~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~~GDs~-~D~~~~~~ag~~~~~~~----~-~~~~~~~a~~v~~~~~~~ 273 (289)
T 3gyg_A 201 YDVDFIPIGTGKNEIVTFMLEKYN-LNTERAIAFGDSG-NDVRMLQTVGNGYLLKN----A-TQEAKNLHNLITDSEYSK 273 (289)
T ss_dssp EEEEEEESCCSHHHHHHHHHHHHT-CCGGGEEEEECSG-GGHHHHTTSSEEEECTT----C-CHHHHHHCCCBCSSCHHH
T ss_pred eEEEEEeCCCCHHHHHHHHHHHcC-CChhhEEEEcCCH-HHHHHHHhCCcEEEECC----c-cHHHHHhCCEEcCCCCcC
Confidence 344455667899999999999999 9999999999999 99999999997755533 1 23344556678887766
Q ss_pred -HHHHHhhhh
Q 039449 242 -VKEFLTSEI 250 (253)
Q Consensus 242 -l~~~l~~~~ 250 (253)
+.+.|++.+
T Consensus 274 gv~~~~~~~~ 283 (289)
T 3gyg_A 274 GITNTLKKLI 283 (289)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
Confidence 777777654
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.75 E-value=7.2e-18 Score=131.47 Aligned_cols=126 Identities=10% Similarity=0.078 Sum_probs=84.6
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhc-CCCCCcceeEeeec----cccCccCCCHHHHHHHHHHhCCC
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPAL-GVNQGTEWDFGVFS----GLEGVEKPDPRIYEIALERAGNI 188 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~-gl~~~~~f~~~~~~----~~~~~~kp~~~~~~~~~~~~~~~ 188 (253)
.+.++..+++..+.....++.+ +.. ........+.+ ...+ .+...... +......+|+.+++.+++.+| +
T Consensus 142 ~~~~~~~~~~~~~~~~~~ki~~-~~~-~~~~~~~~~~l~~~~~--~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lg-i 216 (290)
T 3dnp_A 142 QFVESLSDLLMDEPVSAPVIEV-YTE-HDIQHDITETITKAFP--AVDVIRVNDEKLNIVPKGVSKEAGLALVASELG-L 216 (290)
T ss_dssp EECSCHHHHHHHSCCCCSEEEE-ECC-GGGHHHHHHHHHHHCT--TEEEEEEETTEEEEEETTCCHHHHHHHHHHHTT-C
T ss_pred cccCCHHHHHhcCCCCceEEEE-eCC-HHHHHHHHHHHHhhCC--cEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcC-C
Confidence 3456677777776666677744 433 33333344332 1122 23322221 223345788999999999999 9
Q ss_pred CCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHH--HHHHHhhhh
Q 039449 189 APEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVA--VKEFLTSEI 250 (253)
Q Consensus 189 ~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~e--l~~~l~~~~ 250 (253)
+++++++|||+. ||+.|++.+|+..++-+. .+.+....++++++.++ +..+|++.+
T Consensus 217 ~~~~~i~~GD~~-NDi~m~~~ag~~vam~na-----~~~~k~~Ad~v~~s~~edGv~~~i~~~~ 274 (290)
T 3dnp_A 217 SMDDVVAIGHQY-DDLPMIELAGLGVAMGNA-----VPEIKRKADWVTRSNDEQGVAYMMKEYF 274 (290)
T ss_dssp CGGGEEEEECSG-GGHHHHHHSSEEEECTTS-----CHHHHHHSSEECCCTTTTHHHHHHHHHH
T ss_pred CHHHEEEECCch-hhHHHHHhcCCEEEecCC-----cHHHHHhcCEECCCCCccHHHHHHHHHH
Confidence 999999999999 999999999998777542 34456667788888877 777776543
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=4.5e-18 Score=138.56 Aligned_cols=100 Identities=22% Similarity=0.279 Sum_probs=86.5
Q ss_pred cCCChHHHHHHHHHcCCEEEEEeCCC------------cchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHH
Q 039449 115 VFPDSQPFLRWAREKGLIVGIISNAE------------YRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIAL 182 (253)
Q Consensus 115 ~~~~~~~~l~~l~~~g~~~~i~s~~~------------~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~ 182 (253)
++||+.++|+.|+++|++++|+||.. ...+...++.+|+. |+.++.++.....||+|.+|..++
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~----fd~i~~~~~~~~~KP~p~~~~~a~ 163 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP----FQVLVATHAGLNRKPVSGMWDHLQ 163 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC----CEEEEECSSSTTSTTSSHHHHHHH
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC----EEEEEECCCCCCCCCCHHHHHHHH
Confidence 68999999999999999999999965 12266778888883 688888888889999999999999
Q ss_pred HHhC---CCCCCceEEEcCCc----------------ccchhhhhhcCCeEEEEc
Q 039449 183 ERAG---NIAPEEALHIGDSF----------------RKDYVPAKSVGMHALLVD 218 (253)
Q Consensus 183 ~~~~---~~~~~~~~~iGD~~----------------~~Di~~a~~~G~~~i~~~ 218 (253)
++++ .+++++|+||||+. .+|+.+|+++|++++...
T Consensus 164 ~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~~pe 218 (416)
T 3zvl_A 164 EQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFATPE 218 (416)
T ss_dssp HHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEECHH
T ss_pred HHhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCcccCcH
Confidence 9994 38999999999997 379999999999987543
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.3e-17 Score=120.95 Aligned_cols=105 Identities=15% Similarity=0.088 Sum_probs=73.1
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCc---ch--hhhhhhh-cCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhC
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEY---RY--QDVILPA-LGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAG 186 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~---~~--~~~~l~~-~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~ 186 (253)
..++||+.++|++|++. ++++|+||... .. ....+.. ++... +|+.++..+.. .
T Consensus 68 ~~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~--~~~~i~~~~~~-----------------~ 127 (180)
T 3bwv_A 68 LDVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLD--PQHFVFCGRKN-----------------I 127 (180)
T ss_dssp CCBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSC--GGGEEECSCGG-----------------G
T ss_pred CCCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCC--cccEEEeCCcC-----------------e
Confidence 57899999999999985 99999999832 11 1333444 55554 66665544431 1
Q ss_pred CCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHHHHHHhhh
Q 039449 187 NIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKEFLTSE 249 (253)
Q Consensus 187 ~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~~~l~~~ 249 (253)
+ ++|++|||++ +++. ..+| +++++++ +.+.. ..+.+++.++.|+.+++.+.
T Consensus 128 -l--~~~l~ieDs~-~~i~--~aaG-~~i~~~~-~~~~~----~~~~~~i~~~~el~~~l~~~ 178 (180)
T 3bwv_A 128 -I--LADYLIDDNP-KQLE--IFEG-KSIMFTA-SHNVY----EHRFERVSGWRDVKNYFNSI 178 (180)
T ss_dssp -B--CCSEEEESCH-HHHH--HCSS-EEEEECC-GGGTT----CCSSEEECSHHHHHHHHHHH
T ss_pred -e--cccEEecCCc-chHH--HhCC-CeEEeCC-CcccC----CCCceecCCHHHHHHHHHHh
Confidence 1 4789999999 8985 5689 9999983 22211 23558999999999988754
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.74 E-value=8.4e-18 Score=130.37 Aligned_cols=76 Identities=20% Similarity=0.224 Sum_probs=60.4
Q ss_pred cCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHH--HHHH
Q 039449 168 EGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVA--VKEF 245 (253)
Q Consensus 168 ~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~e--l~~~ 245 (253)
.....+|+.+++.+++++| ++++++++|||+. ||+.|++.+|+..++-+. .+.+....++++++.+| +..+
T Consensus 192 ~~~~~~K~~~l~~l~~~lg-i~~~~~i~~GD~~-NDi~m~~~ag~~vam~na-----~~~~k~~A~~v~~~~~e~Gv~~~ 264 (279)
T 4dw8_A 192 VPQGIDKALSLSVLLENIG-MTREEVIAIGDGY-NDLSMIKFAGMGVAMGNA-----QEPVKKAADYITLTNDEDGVAEA 264 (279)
T ss_dssp ECTTCCHHHHHHHHHHHHT-CCGGGEEEEECSG-GGHHHHHHSSEEEECTTS-----CHHHHHHCSEECCCGGGTHHHHH
T ss_pred ecCCCChHHHHHHHHHHcC-CCHHHEEEECCCh-hhHHHHHHcCcEEEcCCC-----cHHHHHhCCEEcCCCCCcHHHHH
Confidence 3455788999999999999 9999999999999 999999999987766431 34445667788888765 6777
Q ss_pred Hhhhh
Q 039449 246 LTSEI 250 (253)
Q Consensus 246 l~~~~ 250 (253)
|++.+
T Consensus 265 i~~~~ 269 (279)
T 4dw8_A 265 IERIF 269 (279)
T ss_dssp HHHHC
T ss_pred HHHHH
Confidence 76543
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.72 E-value=2.2e-18 Score=129.96 Aligned_cols=105 Identities=21% Similarity=0.108 Sum_probs=73.6
Q ss_pred EEEe-CCCcchhhhhhhhcCCCCCcceeEeeec----cccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhh
Q 039449 134 GIIS-NAEYRYQDVILPALGVNQGTEWDFGVFS----GLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAK 208 (253)
Q Consensus 134 ~i~s-~~~~~~~~~~l~~~gl~~~~~f~~~~~~----~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~ 208 (253)
.+++ +.....++..++.++ . .|+.+ .. +.....+||+.+++.++++++ ++++++++|||+. ||+.+++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~--~--~~~~~-~~~~~~ei~~~~~~K~~~~~~~~~~~~-~~~~~~~~iGD~~-nD~~~~~ 186 (231)
T 1wr8_A 114 VIMRETINVETVREIINELN--L--NLVAV-DSGFAIHVKKPWINKGSGIEKASEFLG-IKPKEVAHVGDGE-NDLDAFK 186 (231)
T ss_dssp EECTTTSCHHHHHHHHHHTT--C--SCEEE-ECSSCEEEECTTCCHHHHHHHHHHHHT-SCGGGEEEEECSG-GGHHHHH
T ss_pred EEECCCCCHHHHHHHHHhcC--C--cEEEE-ecCcEEEEecCCCChHHHHHHHHHHcC-CCHHHEEEECCCH-HHHHHHH
Confidence 4555 334555666666654 2 44443 22 223456899999999999999 9999999999999 9999999
Q ss_pred hcCCeEEEEcCCCCCChhhhhhcCCcccCCHHH--HHHHHhhhh
Q 039449 209 SVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVA--VKEFLTSEI 250 (253)
Q Consensus 209 ~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~e--l~~~l~~~~ 250 (253)
.+|+..+ +. .. .+.+....++++++..+ +..+|++.+
T Consensus 187 ~ag~~v~-~~-~~---~~~~~~~a~~v~~~~~e~Gv~~~l~~~~ 225 (231)
T 1wr8_A 187 VVGYKVA-VA-QA---PKILKENADYVTKKEYGEGGAEAIYHIL 225 (231)
T ss_dssp HSSEEEE-CT-TS---CHHHHTTCSEECSSCHHHHHHHHHHHHH
T ss_pred HcCCeEE-ec-CC---CHHHHhhCCEEecCCCcchHHHHHHHHH
Confidence 9999844 43 12 23444556788888776 677776543
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.5e-16 Score=113.18 Aligned_cols=105 Identities=16% Similarity=0.143 Sum_probs=80.9
Q ss_pred HHHHHHHcCCEEEEEeCCCcchhhhhhh--hcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCC
Q 039449 122 FLRWAREKGLIVGIISNAEYRYQDVILP--ALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDS 199 (253)
Q Consensus 122 ~l~~l~~~g~~~~i~s~~~~~~~~~~l~--~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~ 199 (253)
.|+.|+++|++++++|+. ..++..++ .+|+. +| . ..++|++.+..++++++ ++++++++|||+
T Consensus 44 ~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~---~~----~-----g~~~K~~~l~~~~~~~g-i~~~~~~~vGD~ 108 (168)
T 3ewi_A 44 GISLLKKSGIEVRLISER--ACSKQTLSALKLDCK---TE----V-----SVSDKLATVDEWRKEMG-LCWKEVAYLGNE 108 (168)
T ss_dssp HHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC---EE----C-----SCSCHHHHHHHHHHHTT-CCGGGEEEECCS
T ss_pred HHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE---EE----E-----CCCChHHHHHHHHHHcC-cChHHEEEEeCC
Confidence 688999999999999999 66777888 44442 21 1 13678999999999999 999999999999
Q ss_pred cccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCC------HHHHHHHHh
Q 039449 200 FRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPD------LVAVKEFLT 247 (253)
Q Consensus 200 ~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~------l~el~~~l~ 247 (253)
. ||+.+++.+|+.+++-+. .+.+....++++++ +.++.+.+.
T Consensus 109 ~-nDi~~~~~ag~~~a~~na-----~~~~k~~Ad~v~~~~~~~G~~~~~~~~il 156 (168)
T 3ewi_A 109 V-SDEECLKRVGLSAVPADA-----CSGAQKAVGYICKCSGGRGAIREFAEHIF 156 (168)
T ss_dssp G-GGHHHHHHSSEEEECTTC-----CHHHHTTCSEECSSCTTTTHHHHHHHHHH
T ss_pred H-hHHHHHHHCCCEEEeCCh-----hHHHHHhCCEEeCCCCCccHHHHHHHHHH
Confidence 9 999999999999765331 24455666777765 445555554
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.71 E-value=1.6e-16 Score=122.75 Aligned_cols=75 Identities=13% Similarity=0.198 Sum_probs=60.8
Q ss_pred cCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHH--HHHH
Q 039449 168 EGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVA--VKEF 245 (253)
Q Consensus 168 ~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~e--l~~~ 245 (253)
....++|+.+++.+++++| ++++++++|||+. ||+.|++.+|+..++-+. .+.+....++++++.+| +..+
T Consensus 195 ~~~~~~K~~~l~~l~~~lg-i~~~~~i~~GD~~-NDi~m~~~ag~~vam~na-----~~~~k~~A~~v~~~~~edGv~~~ 267 (274)
T 3fzq_A 195 IQKDFHKGKAIKRLQERLG-VTQKETICFGDGQ-NDIVMFQASDVTIAMKNS-----HQQLKDIATSICEDIFDNGIYKE 267 (274)
T ss_dssp EETTCSHHHHHHHHHHHHT-CCSTTEEEECCSG-GGHHHHHTCSEEEEETTS-----CHHHHHHCSEEECCGGGTHHHHH
T ss_pred eeCCCCHHHHHHHHHHHcC-CCHHHEEEECCCh-hHHHHHHhcCceEEecCc-----cHHHHHhhhheeCCCchhHHHHH
Confidence 3456889999999999999 9999999999999 999999999987777442 23455667788888775 6777
Q ss_pred Hhhh
Q 039449 246 LTSE 249 (253)
Q Consensus 246 l~~~ 249 (253)
|++.
T Consensus 268 l~~~ 271 (274)
T 3fzq_A 268 LKRR 271 (274)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 7653
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.70 E-value=2.2e-17 Score=128.33 Aligned_cols=73 Identities=15% Similarity=0.150 Sum_probs=60.7
Q ss_pred ccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHH--HHHHHh
Q 039449 170 VEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVA--VKEFLT 247 (253)
Q Consensus 170 ~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~e--l~~~l~ 247 (253)
...+|+.+++.+++.+| ++++++++|||+. ||+.|++.+|+..++-+. .+.+....++++++.+| +..+|+
T Consensus 208 ~~~~K~~~l~~l~~~lg-i~~~e~ia~GD~~-NDi~ml~~ag~~vam~na-----~~~~k~~A~~v~~s~~edGv~~~l~ 280 (283)
T 3dao_A 208 KGVSKWTALSYLIDRFD-LLPDEVCCFGDNL-NDIEMLQNAGISYAVSNA-----RQEVIAAAKHTCAPYWENGVLSVLK 280 (283)
T ss_dssp TTCCHHHHHHHHHHHTT-CCGGGEEEEECSG-GGHHHHHHSSEEEEETTS-----CHHHHHHSSEEECCGGGTHHHHHHH
T ss_pred CCCcHHHHHHHHHHHhC-CCHHHEEEECCCH-HHHHHHHhCCCEEEcCCC-----CHHHHHhcCeECCCCCCChHHHHHH
Confidence 45678999999999999 9999999999999 999999999988777542 34455667788888887 777776
Q ss_pred hh
Q 039449 248 SE 249 (253)
Q Consensus 248 ~~ 249 (253)
+.
T Consensus 281 ~~ 282 (283)
T 3dao_A 281 SF 282 (283)
T ss_dssp HT
T ss_pred Hh
Confidence 64
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.68 E-value=1.1e-17 Score=129.70 Aligned_cols=72 Identities=13% Similarity=0.190 Sum_probs=49.6
Q ss_pred cCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHH--HHHHHhh
Q 039449 171 EKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVA--VKEFLTS 248 (253)
Q Consensus 171 ~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~e--l~~~l~~ 248 (253)
..+|+.+++.+++.+| ++++++++|||+. ||+.|++.+|+..++-+. .+.+....++++++.++ +..+|++
T Consensus 195 ~~~K~~~l~~l~~~lg-i~~~~~i~~GD~~-NDi~m~~~ag~~vam~na-----~~~~k~~A~~v~~~~~e~Gv~~~i~~ 267 (279)
T 3mpo_A 195 RASKGGTLSELVDQLG-LTADDVMTLGDQG-NDLTMIKYAGLGVAMGNA-----IDEVKEAAQAVTLTNAENGVAAAIRK 267 (279)
T ss_dssp SCCHHHHHHHHHHHTT-CCGGGEEEC--CC-TTHHHHHHSTEECBC--------CCHHHHHCSCBC------CHHHHHC-
T ss_pred CCChHHHHHHHHHHcC-CCHHHEEEECCch-hhHHHHHhcCceeeccCC-----CHHHHHhcceeccCCCccHHHHHHHH
Confidence 3458899999999999 9999999999999 999999999987776552 23345566778887665 6666665
Q ss_pred h
Q 039449 249 E 249 (253)
Q Consensus 249 ~ 249 (253)
.
T Consensus 268 ~ 268 (279)
T 3mpo_A 268 Y 268 (279)
T ss_dssp -
T ss_pred H
Confidence 4
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=2e-17 Score=131.17 Aligned_cols=80 Identities=16% Similarity=0.225 Sum_probs=60.7
Q ss_pred CccCCCHHHHHHHHHHh----------------------C----CCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCC
Q 039449 169 GVEKPDPRIYEIALERA----------------------G----NIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKT 222 (253)
Q Consensus 169 ~~~kp~~~~~~~~~~~~----------------------~----~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~ 222 (253)
..+||++.+|+.+.+.+ + ..++++++||||++.+||.+|+++|+.+++|.+ +.
T Consensus 243 ~~GKP~~~~y~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~-G~ 321 (352)
T 3kc2_A 243 TLGKPTKLTYDFAHHVLIDWEKRLSGKIGQSVKQKLPLLGTKPSTSPFHAVFMVGDNPASDIIGAQNYGWNSCLVKT-GV 321 (352)
T ss_dssp ECSTTCHHHHHHHHHHHHHHHHHHHC--------------CCTTTTTSSEEEEEESCTTTHHHHHHHHTCEEEECSS-SS
T ss_pred EecCCCHHHHHHHHHHHHHHHHhhhcccccccccccccccccccCCCcceEEEEecCcHHHHHHHHHcCCEEEEEcc-CC
Confidence 35699999999887654 2 025799999999996699999999999999984 33
Q ss_pred CChhh--hhhcCCcccCCHHHHHHHHhhh
Q 039449 223 PDAKE--WRKSGAIVLPDLVAVKEFLTSE 249 (253)
Q Consensus 223 ~~~~~--~~~~~~~~i~~l~el~~~l~~~ 249 (253)
..... ....++++++|+.|+.+++.+.
T Consensus 322 ~~~~~~~~~~~pd~vi~~l~el~~~il~~ 350 (352)
T 3kc2_A 322 YNEGDDLKECKPTLIVNDVFDAVTKTLEK 350 (352)
T ss_dssp CCTTCCCTTCCCSEECSSHHHHHHHHHHH
T ss_pred CCcccccccCCCCEEECCHHHHHHHHHHh
Confidence 22221 1234668999999999888653
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.64 E-value=4.2e-16 Score=122.25 Aligned_cols=74 Identities=11% Similarity=0.063 Sum_probs=61.2
Q ss_pred ccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHH--HHHHHh
Q 039449 170 VEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVA--VKEFLT 247 (253)
Q Consensus 170 ~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~e--l~~~l~ 247 (253)
...+|+.+++.+++++| ++++++++|||+. ||+.|++.+|+..++-+. .+.+....++++++.+| +..+|+
T Consensus 225 ~~~~K~~al~~l~~~lg-i~~~e~i~~GDs~-NDi~m~~~ag~~vam~na-----~~~~k~~Ad~v~~~~~edGv~~~l~ 297 (304)
T 3l7y_A 225 KGLHKGWALQQLLKRWN-FTSDHLMAFGDGG-NDIEMLKLAKYSYAMANA-----PKNVKAAANYQAKSNDESGVLDVID 297 (304)
T ss_dssp TTCSHHHHHHHHHHHTT-CCGGGEEEEECSG-GGHHHHHHCTEEEECTTS-----CHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhC-cCHHHEEEECCCH-HHHHHHHhcCCeEEcCCc-----CHHHHHhccEEcCCCCcchHHHHHH
Confidence 45678899999999999 9999999999999 999999999988776442 34456667789998887 777777
Q ss_pred hhh
Q 039449 248 SEI 250 (253)
Q Consensus 248 ~~~ 250 (253)
+.+
T Consensus 298 ~~~ 300 (304)
T 3l7y_A 298 NYL 300 (304)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=99.64 E-value=2.9e-17 Score=126.10 Aligned_cols=74 Identities=11% Similarity=0.152 Sum_probs=61.4
Q ss_pred CccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHH--HHHHH
Q 039449 169 GVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVA--VKEFL 246 (253)
Q Consensus 169 ~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~e--l~~~l 246 (253)
...+||+.++..++++++ ++++++++|||+. ||+.|++.+|+.+++-+ . .+.+....++++++..+ +..+|
T Consensus 183 ~~~~~K~~~~~~~~~~~~-~~~~~~~~iGD~~-nD~~~~~~ag~~v~~~n----~-~~~~~~~a~~v~~~~~~dGv~~~l 255 (261)
T 2rbk_A 183 AKGDTKQKGIDEIIRHFG-IKLEETMSFGDGG-NDISMLRHAAIGVAMGQ----A-KEDVKAAADYVTAPIDEDGISKAM 255 (261)
T ss_dssp STTCSHHHHHHHHHHHHT-CCGGGEEEEECSG-GGHHHHHHSSEEEECTT----S-CHHHHHHSSEECCCGGGTHHHHHH
T ss_pred CCCCChHHHHHHHHHHcC-CCHHHEEEECCCH-HHHHHHHHcCceEEecC----c-cHHHHhhCCEEeccCchhhHHHHH
Confidence 456899999999999999 9999999999999 99999999999766522 1 23445567789999999 98888
Q ss_pred hhh
Q 039449 247 TSE 249 (253)
Q Consensus 247 ~~~ 249 (253)
++.
T Consensus 256 ~~~ 258 (261)
T 2rbk_A 256 KHF 258 (261)
T ss_dssp HHH
T ss_pred HHh
Confidence 764
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.61 E-value=2.6e-15 Score=115.66 Aligned_cols=74 Identities=11% Similarity=0.065 Sum_probs=60.0
Q ss_pred CccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHH--HHHHH
Q 039449 169 GVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVA--VKEFL 246 (253)
Q Consensus 169 ~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~e--l~~~l 246 (253)
....+|+.+++.+++++| ++++++++|||+. ||+.|++.+|+..++-+. .+.+....++++++.+| +..+|
T Consensus 190 ~~~~~K~~~l~~l~~~lg-i~~~~~ia~GD~~-NDi~m~~~ag~~vam~na-----~~~~k~~Ad~v~~~~~edGv~~~l 262 (268)
T 3r4c_A 190 VAGTSKATGLSLFADYYR-VKVSEIMACGDGG-NDIPMLKAAGIGVAMGNA-----SEKVQSVADFVTDTVDNSGLYKAL 262 (268)
T ss_dssp ETTCCHHHHHHHHHHHTT-CCGGGEEEEECSG-GGHHHHHHSSEEEECTTS-----CHHHHHTCSEECCCTTTTHHHHHH
T ss_pred eCCCCHHHHHHHHHHHcC-CCHHHEEEECCcH-HhHHHHHhCCCeEEeCCC-----cHHHHHhcCEeeCCCCcCHHHHHH
Confidence 445778899999999999 9999999999999 999999999988777542 34456667788887765 77777
Q ss_pred hhh
Q 039449 247 TSE 249 (253)
Q Consensus 247 ~~~ 249 (253)
++.
T Consensus 263 ~~~ 265 (268)
T 3r4c_A 263 KHF 265 (268)
T ss_dssp HHT
T ss_pred HHh
Confidence 653
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.61 E-value=1.5e-17 Score=128.47 Aligned_cols=113 Identities=12% Similarity=0.034 Sum_probs=77.0
Q ss_pred HHcCCEEEEEeCCCcchhhhhhhhcC--CCCCcceeEeeec----cccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCc
Q 039449 127 REKGLIVGIISNAEYRYQDVILPALG--VNQGTEWDFGVFS----GLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSF 200 (253)
Q Consensus 127 ~~~g~~~~i~s~~~~~~~~~~l~~~g--l~~~~~f~~~~~~----~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~ 200 (253)
+..++++.++++... ....++.++ +.. .|..+... +.....++|+.+++.+++.++ ++++++++|||+.
T Consensus 143 ~~~~~ki~i~~~~~~--~~~~~~~l~~~~~~--~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~-i~~~~~~~~GD~~ 217 (271)
T 1rlm_A 143 DDVLFKFSLNLPDEQ--IPLVIDKLHVALDG--IMKPVTSGFGFIDLIIPGLHKANGISRLLKRWD-LSPQNVVAIGDSG 217 (271)
T ss_dssp CSCEEEEEEECCGGG--HHHHHHHHHHHTTT--SSEEEECSTTEEEEECTTCSHHHHHHHHHHHHT-CCGGGEEEEECSG
T ss_pred CCceEEEEEEcCHHH--HHHHHHHHHHHcCC--cEEEEeccCCeEEEEcCCCChHHHHHHHHHHhC-CCHHHEEEECCcH
Confidence 345677777775532 444444443 433 44443333 223456899999999999999 9999999999999
Q ss_pred ccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHH--HHHHHhhhh
Q 039449 201 RKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVA--VKEFLTSEI 250 (253)
Q Consensus 201 ~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~e--l~~~l~~~~ 250 (253)
||+.|++.+|+..++-+ . .+.+....++++++.++ +..+|++.+
T Consensus 218 -nD~~m~~~ag~~va~~n--a---~~~~k~~a~~v~~~~~~dGVa~~l~~~~ 263 (271)
T 1rlm_A 218 -NDAEMLKMARYSFAMGN--A---AENIKQIARYATDDNNHEGALNVIQAVL 263 (271)
T ss_dssp -GGHHHHHHCSEEEECTT--C---CHHHHHHCSEECCCGGGTHHHHHHHHHH
T ss_pred -HHHHHHHHcCCeEEeCC--c---cHHHHHhCCeeCcCCCCChHHHHHHHHH
Confidence 99999999999765422 1 23345566778888765 666666543
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=99.60 E-value=3.2e-15 Score=113.79 Aligned_cols=102 Identities=18% Similarity=0.170 Sum_probs=72.5
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCc---chhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCC
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEY---RYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIA 189 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~---~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~ 189 (253)
..++||+.++|+.|+++|++++++||... ..+...++.+|+....+|+.++.... ..||.+ ...+ ...+ .
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~~~~--~~K~~~--~~~~-~~~~-~- 172 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQDPK--EKGKEK--RREL-VSQT-H- 172 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEECTT--CCSSHH--HHHH-HHHH-E-
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEECCCC--CCCcHH--HHHH-HHhC-C-
Confidence 37889999999999999999999999984 34566778889881115665544432 234533 3332 2334 3
Q ss_pred CCceEEEcCCcccchhhhh-------h---------cCCeEEEEcCCCCC
Q 039449 190 PEEALHIGDSFRKDYVPAK-------S---------VGMHALLVDRFKTP 223 (253)
Q Consensus 190 ~~~~~~iGD~~~~Di~~a~-------~---------~G~~~i~~~~~~~~ 223 (253)
+.+++|||+. +|+.+|. + +|+.++.++++...
T Consensus 173 -~~~l~VGDs~-~Di~aA~~~~~~~r~a~v~~~~~~aG~~~i~lpn~~y~ 220 (258)
T 2i33_A 173 -DIVLFFGDNL-SDFTGFDGKSVKDRNQAVTDSKAQFGEKFIIFPNPMYG 220 (258)
T ss_dssp -EEEEEEESSG-GGSTTCSSCCHHHHHHHHHHTGGGBTTTEEECCCCSSS
T ss_pred -CceEEeCCCH-HHhcccccCCHHHHHHHHHHHHHHhcCceEECCCCCcc
Confidence 3599999999 8999993 4 79999999854333
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.60 E-value=7.3e-16 Score=118.09 Aligned_cols=72 Identities=15% Similarity=0.171 Sum_probs=58.1
Q ss_pred cCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHH--HHHHHhh
Q 039449 171 EKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVA--VKEFLTS 248 (253)
Q Consensus 171 ~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~e--l~~~l~~ 248 (253)
.-.|..+++.+++.+| ++++++++|||+. ||+.|++.+|+.+++-+ ..+.+....++++++.++ +..+|++
T Consensus 181 ~~~K~~~l~~l~~~lg-i~~~~~ia~GDs~-NDi~ml~~ag~~vam~n-----a~~~~k~~A~~v~~~~~~dGva~~i~~ 253 (258)
T 2pq0_A 181 GGSKAEGIRMMIEKLG-IDKKDVYAFGDGL-NDIEMLSFVGTGVAMGN-----AHEEVKRVADFVTKPVDKEGIWYGLKQ 253 (258)
T ss_dssp SCCHHHHHHHHHHHHT-CCGGGEEEECCSG-GGHHHHHHSSEEEEETT-----CCHHHHHTCSEEECCGGGTHHHHHHHH
T ss_pred CCChHHHHHHHHHHhC-CCHHHEEEECCcH-HhHHHHHhCCcEEEeCC-----CcHHHHHhCCEEeCCCCcchHHHHHHH
Confidence 4567899999999999 9999999999999 99999999999888622 234556667788888765 6777765
Q ss_pred h
Q 039449 249 E 249 (253)
Q Consensus 249 ~ 249 (253)
.
T Consensus 254 ~ 254 (258)
T 2pq0_A 254 L 254 (258)
T ss_dssp T
T ss_pred h
Confidence 3
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.58 E-value=8.2e-16 Score=119.53 Aligned_cols=74 Identities=12% Similarity=0.154 Sum_probs=57.4
Q ss_pred ccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCC--cccCCHHH--HHHH
Q 039449 170 VEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGA--IVLPDLVA--VKEF 245 (253)
Q Consensus 170 ~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~--~~i~~l~e--l~~~ 245 (253)
...+|+.+++.+++.+| ++++++++|||+. ||+.|++.+|+..++-+. .+.+....+ .++++.+| +..+
T Consensus 206 ~~~~K~~al~~l~~~lg-i~~~~~ia~GD~~-NDi~ml~~ag~~vAm~Na-----~~~vk~~A~~~~v~~sn~edGva~~ 278 (285)
T 3pgv_A 206 GGVSKGHALEAVAKMLG-YTLSDCIAFGDGM-NDAEMLSMAGKGCIMANA-----HQRLKDLHPELEVIGSNADDAVPRY 278 (285)
T ss_dssp TTCSHHHHHHHHHHHTT-CCGGGEEEEECSG-GGHHHHHHSSEEEECTTS-----CHHHHHHCTTSEECCCGGGTHHHHH
T ss_pred CCCChHHHHHHHHHHhC-CCHHHEEEECCcH-hhHHHHHhcCCEEEccCC-----CHHHHHhCCCCEecccCCcchHHHH
Confidence 44678999999999999 9999999999999 999999999988777552 233444444 36677665 6777
Q ss_pred Hhhhh
Q 039449 246 LTSEI 250 (253)
Q Consensus 246 l~~~~ 250 (253)
|++.+
T Consensus 279 i~~~~ 283 (285)
T 3pgv_A 279 LRKLY 283 (285)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 76643
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.54 E-value=1e-14 Score=109.43 Aligned_cols=72 Identities=14% Similarity=-0.001 Sum_probs=55.4
Q ss_pred cCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHH--HHHHHHhh
Q 039449 171 EKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLV--AVKEFLTS 248 (253)
Q Consensus 171 ~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~--el~~~l~~ 248 (253)
..+|+.+++.+++.++ ++++++++|||+. ||+.+++.+|+..++ . .. .+.+....++++.+.. .+..+|++
T Consensus 151 ~~~K~~~l~~l~~~~~-~~~~~~~~iGD~~-nD~~m~~~ag~~va~-~-n~---~~~~k~~a~~v~~~~~~~Gv~~~l~~ 223 (227)
T 1l6r_A 151 GEDKAFAVNKLKEMYS-LEYDEILVIGDSN-NDMPMFQLPVRKACP-A-NA---TDNIKAVSDFVSDYSYGEEIGQIFKH 223 (227)
T ss_dssp TCSHHHHHHHHHHHTT-CCGGGEEEECCSG-GGHHHHTSSSEEEEC-T-TS---CHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhC-cCHHHEEEECCcH-HhHHHHHHcCceEEe-c-Cc---hHHHHHhCCEEecCCCCcHHHHHHHH
Confidence 4678899999999999 9999999999999 999999999997543 2 11 2334455667777654 47777765
Q ss_pred h
Q 039449 249 E 249 (253)
Q Consensus 249 ~ 249 (253)
.
T Consensus 224 ~ 224 (227)
T 1l6r_A 224 F 224 (227)
T ss_dssp T
T ss_pred H
Confidence 4
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=99.49 E-value=7.6e-14 Score=109.24 Aligned_cols=98 Identities=13% Similarity=0.041 Sum_probs=82.1
Q ss_pred cCCChHHHHHHHHHcCCEEEEEeCCCcch---hhhhhhh--------cCCCCCcceeEeeeccccCccCCCHHHHHHHHH
Q 039449 115 VFPDSQPFLRWAREKGLIVGIISNAEYRY---QDVILPA--------LGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALE 183 (253)
Q Consensus 115 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~---~~~~l~~--------~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~ 183 (253)
++||+.++|+.|+++|++++++||..... +...++. +|+ +|+.++..+.. ..||+|+.+..+++
T Consensus 189 ~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~----~~~~~~~~~~~-~~kp~p~~~~~~~~ 263 (301)
T 1ltq_A 189 INPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV----PLVMQCQREQG-DTRKDDVVKEEIFW 263 (301)
T ss_dssp BCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC----CCSEEEECCTT-CCSCHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCC----CchheeeccCC-CCcHHHHHHHHHHH
Confidence 58999999999999999999999998654 3455666 777 25666665554 46899999999999
Q ss_pred HhCCCCCCc-eEEEcCCcccchhhhhhcCCeEEEEcC
Q 039449 184 RAGNIAPEE-ALHIGDSFRKDYVPAKSVGMHALLVDR 219 (253)
Q Consensus 184 ~~~~~~~~~-~~~iGD~~~~Di~~a~~~G~~~i~~~~ 219 (253)
+++ .++.+ +++|||+. +|+.+|+++|++++.|.+
T Consensus 264 ~~~-~~~~~~~~~vgD~~-~di~~a~~aG~~~~~v~~ 298 (301)
T 1ltq_A 264 KHI-APHFDVKLAIDDRT-QVVEMWRRIGVECWQVAS 298 (301)
T ss_dssp HHT-TTTCEEEEEEECCH-HHHHHHHHTTCCEEECSC
T ss_pred HHh-ccccceEEEeCCcH-HHHHHHHHcCCeEEEecC
Confidence 998 77655 79999999 899999999999999984
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.40 E-value=4.9e-13 Score=103.62 Aligned_cols=73 Identities=18% Similarity=0.145 Sum_probs=55.8
Q ss_pred ccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHH--HHHHHh
Q 039449 170 VEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVA--VKEFLT 247 (253)
Q Consensus 170 ~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~e--l~~~l~ 247 (253)
..-+|+.+++.+++.++ ++++++++|||+. ||+.|++.+|+..++ . .. .+.+....++++++..+ +..+|+
T Consensus 195 ~~~~K~~~l~~l~~~~~-~~~~~~~~~GD~~-nD~~m~~~ag~~va~-~-n~---~~~~~~~a~~v~~~~~~dGV~~~l~ 267 (282)
T 1rkq_A 195 KRVNKGTGVKSLADVLG-IKPEEIMAIGDQE-NDIAMIEYAGVGVAV-D-NA---IPSVKEVANFVTKSNLEDGVAFAIE 267 (282)
T ss_dssp TTCSHHHHHHHHHHHHT-CCGGGEEEEECSG-GGHHHHHHSSEEEEC-T-TS---CHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhC-CCHHHEEEECCcH-HHHHHHHHCCcEEEe-c-CC---cHHHHhhCCEEecCCCcchHHHHHH
Confidence 34578899999999999 9999999999999 999999999985443 2 11 23444556778877554 777776
Q ss_pred hh
Q 039449 248 SE 249 (253)
Q Consensus 248 ~~ 249 (253)
+.
T Consensus 268 ~~ 269 (282)
T 1rkq_A 268 KY 269 (282)
T ss_dssp HH
T ss_pred HH
Confidence 54
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=99.39 E-value=1.7e-12 Score=102.92 Aligned_cols=123 Identities=16% Similarity=0.155 Sum_probs=77.9
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcce-eEeeeccc----------------cCccCCC--
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEW-DFGVFSGL----------------EGVEKPD-- 174 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f-~~~~~~~~----------------~~~~kp~-- 174 (253)
.+.+++.++++.|++ |++++++|+.....+....+.+++.. .+ ........ ....++.
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~ 179 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRG--ELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEE 179 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCS--EEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhh--hhcccccchhhhccccccceeEEecCHHHHhhhhHH
Confidence 557999999999999 99999999887555555555566533 22 11111000 0001111
Q ss_pred -------------HHHHH------------HHHHHhCCCCCCc----eEEEcCCcccchhhhhhc----CCeEEEEcCCC
Q 039449 175 -------------PRIYE------------IALERAGNIAPEE----ALHIGDSFRKDYVPAKSV----GMHALLVDRFK 221 (253)
Q Consensus 175 -------------~~~~~------------~~~~~~~~~~~~~----~~~iGD~~~~Di~~a~~~----G~~~i~~~~~~ 221 (253)
+..+. .+++ + +++++ |++|||+. ||+.|++.+ |+..++ +.
T Consensus 180 ~l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~--g-i~~~~~~~~via~GDs~-NDi~ml~~A~~~~g~~vam-na-- 252 (332)
T 1y8a_A 180 LFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMR--G-YCESKGIDFPVVVGDSI-SDYKMFEAARGLGGVAIAF-NG-- 252 (332)
T ss_dssp HHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHH--H-HHHHHTCSSCEEEECSG-GGHHHHHHHHHTTCEEEEE-SC--
T ss_pred HHHHHHHHHhhcCCCceeeEEecCCCCCHHHHHh--c-cChhhcCceEEEEeCcH-hHHHHHHHHhhcCCeEEEe-cC--
Confidence 11121 1222 5 67788 99999999 999999999 998776 52
Q ss_pred CCChhhhhhcCCcccCC--HHHHHHHHhhh
Q 039449 222 TPDAKEWRKSGAIVLPD--LVAVKEFLTSE 249 (253)
Q Consensus 222 ~~~~~~~~~~~~~~i~~--l~el~~~l~~~ 249 (253)
.+.+....++++.+ .+.+..+|++.
T Consensus 253 ---~~~lk~~Ad~v~~~~~~dGV~~~l~~~ 279 (332)
T 1y8a_A 253 ---NEYALKHADVVIISPTAMSEAKVIELF 279 (332)
T ss_dssp ---CHHHHTTCSEEEECSSTHHHHHHHHHH
T ss_pred ---CHHHHhhCcEEecCCCCCHHHHHHHHH
Confidence 23445556677766 66676666653
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=99.39 E-value=5.1e-12 Score=95.23 Aligned_cols=100 Identities=14% Similarity=0.121 Sum_probs=71.9
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcc----hhhhhhhhcCCCCCccee-EeeeccccCccCCCHHHHHHHHHHhCC
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYR----YQDVILPALGVNQGTEWD-FGVFSGLEGVEKPDPRIYEIALERAGN 187 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~----~~~~~l~~~gl~~~~~f~-~~~~~~~~~~~kp~~~~~~~~~~~~~~ 187 (253)
.+++||+.++++.|++.|++++++||.+.. .+...|+.+|+.. +++ .++.... ..+|...+..+.+. |
T Consensus 100 ~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~--~~~~~Lilr~~---~~~K~~~r~~l~~~-G- 172 (262)
T 3ocu_A 100 SRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNG--VEESAFYLKKD---KSAKAARFAEIEKQ-G- 172 (262)
T ss_dssp CEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSC--CSGGGEEEESS---CSCCHHHHHHHHHT-T-
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCc--ccccceeccCC---CCChHHHHHHHHhc-C-
Confidence 488999999999999999999999999764 6778899999986 442 3333222 23445555555544 4
Q ss_pred CCCCceEEEcCCcccchhhhh-----------------hcCCeEEEEcCCCC
Q 039449 188 IAPEEALHIGDSFRKDYVPAK-----------------SVGMHALLVDRFKT 222 (253)
Q Consensus 188 ~~~~~~~~iGD~~~~Di~~a~-----------------~~G~~~i~~~~~~~ 222 (253)
. ..+++|||+. +|+.++. ..|-+.|.++.+..
T Consensus 173 y--~iv~~vGD~~-~Dl~~~~~~~~~~~r~a~v~~~~~~fG~~~ivlPNp~Y 221 (262)
T 3ocu_A 173 Y--EIVLYVGDNL-DDFGNTVYGKLNADRRAFVDQNQGKFGKTFIMLPNANY 221 (262)
T ss_dssp E--EEEEEEESSG-GGGCSTTTTCCHHHHHHHHHHTGGGBTTTEEECCCSSC
T ss_pred C--CEEEEECCCh-HHhccccccCCHHHHHHHHHHHHHHhCCCEEEeCCCCc
Confidence 3 2499999999 8999832 25777887775433
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.38 E-value=1.9e-13 Score=105.18 Aligned_cols=78 Identities=17% Similarity=0.196 Sum_probs=59.7
Q ss_pred CccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHH--HHHHHH
Q 039449 169 GVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLV--AVKEFL 246 (253)
Q Consensus 169 ~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~--el~~~l 246 (253)
....+|+.++..+++.++ ++++++++|||+. ||+.|++.+|+..++-+ . .+.+....++++++.. .+..+|
T Consensus 186 ~~~~~K~~~~~~~~~~~~-~~~~~~~~~GD~~-nD~~~~~~ag~~v~~~n----~-~~~~~~~a~~v~~~~~~dGv~~~i 258 (268)
T 1nf2_A 186 PKNVDKGKALRFLRERMN-WKKEEIVVFGDNE-NDLFMFEEAGLRVAMEN----A-IEKVKEASDIVTLTNNDSGVSYVL 258 (268)
T ss_dssp CTTCCHHHHHHHHHHHHT-CCGGGEEEEECSH-HHHHHHTTCSEEEECTT----S-CHHHHHHCSEECCCTTTTHHHHHH
T ss_pred CCCCChHHHHHHHHHHcC-CCHHHeEEEcCch-hhHHHHHHcCCEEEecC----C-CHHHHhhCCEEEccCCcchHHHHH
Confidence 345678899999999999 9999999999999 99999999999655422 1 2344455677887754 488888
Q ss_pred hhhhhcC
Q 039449 247 TSEISAC 253 (253)
Q Consensus 247 ~~~~~~~ 253 (253)
++.+.-|
T Consensus 259 ~~~~~~~ 265 (268)
T 1nf2_A 259 ERISTDC 265 (268)
T ss_dssp TTBCBSS
T ss_pred HHHHHhc
Confidence 7765443
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=99.37 E-value=2.4e-12 Score=96.92 Aligned_cols=100 Identities=15% Similarity=0.198 Sum_probs=70.9
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcc----hhhhhhhhcCCCCCccee-EeeeccccCccCCCHHHHHHHHHHhCC
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYR----YQDVILPALGVNQGTEWD-FGVFSGLEGVEKPDPRIYEIALERAGN 187 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~----~~~~~l~~~gl~~~~~f~-~~~~~~~~~~~kp~~~~~~~~~~~~~~ 187 (253)
.+++||+.++|+.|++.|++++++||.+.. .+...|+.+|+.. +++ .++.... ...|...+ ..+...+
T Consensus 100 ~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~--~~~~~Lilr~~---~~~K~~~r-~~L~~~g- 172 (260)
T 3pct_A 100 SAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTG--VNDKTLLLKKD---KSNKSVRF-KQVEDMG- 172 (260)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCC--CSTTTEEEESS---CSSSHHHH-HHHHTTT-
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCc--cccceeEecCC---CCChHHHH-HHHHhcC-
Confidence 488999999999999999999999999765 6778899999986 442 2233221 12233444 4444445
Q ss_pred CCCCceEEEcCCcccchhh--------hhh---------cCCeEEEEcCCCC
Q 039449 188 IAPEEALHIGDSFRKDYVP--------AKS---------VGMHALLVDRFKT 222 (253)
Q Consensus 188 ~~~~~~~~iGD~~~~Di~~--------a~~---------~G~~~i~~~~~~~ 222 (253)
. +.+++|||+. +|+.+ +++ .|-+.|.++.+..
T Consensus 173 y--~iv~~iGD~~-~Dl~~~~~~~~~~~r~a~v~~~~~~fG~~~ivlPNp~Y 221 (260)
T 3pct_A 173 Y--DIVLFVGDNL-NDFGDATYKKSNAERRDFVAKNSKAFGKKFIVLPNTQY 221 (260)
T ss_dssp C--EEEEEEESSG-GGGCGGGTTCCHHHHHHHHHHTGGGBTTTEEECCCCSC
T ss_pred C--CEEEEECCCh-HHcCcccccCCHHHHHHHHHHHHHHhCCCEEEeCCCCc
Confidence 3 3599999999 89998 233 5778887775443
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.36 E-value=5e-13 Score=103.93 Aligned_cols=70 Identities=14% Similarity=0.161 Sum_probs=54.7
Q ss_pred CCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHH--HHHHHhh
Q 039449 172 KPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVA--VKEFLTS 248 (253)
Q Consensus 172 kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~e--l~~~l~~ 248 (253)
-+|..++..+++.++ ++++++++|||+. ||+.|++.+|+.. .+.+ . .+.+....++++++..+ +...|++
T Consensus 215 ~~K~~~~~~~~~~~~-~~~~~~~~~GD~~-nD~~m~~~ag~~v-a~~~-~---~~~~~~~a~~v~~~~~~dGVa~~i~~ 286 (288)
T 1nrw_A 215 ASKGQALKRLAKQLN-IPLEETAAVGDSL-NDKSMLEAAGKGV-AMGN-A---REDIKSIADAVTLTNDEHGVAHMMKH 286 (288)
T ss_dssp CSHHHHHHHHHHHTT-CCGGGEEEEESSG-GGHHHHHHSSEEE-ECTT-C---CHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred CChHHHHHHHHHHhC-CCHHHEEEEcCCH-HHHHHHHHcCcEE-EEcC-C---CHHHHhhCceeecCCCcChHHHHHHH
Confidence 467889999999999 9999999999999 9999999999954 4431 2 23445556778887765 6666654
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.27 E-value=1e-11 Score=97.05 Aligned_cols=74 Identities=16% Similarity=0.164 Sum_probs=56.4
Q ss_pred ccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccC-CHH--HHHHHH
Q 039449 170 VEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLP-DLV--AVKEFL 246 (253)
Q Consensus 170 ~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~-~l~--el~~~l 246 (253)
..-+|+.+++.+++.++ ++++++++|||+. ||+.|++.+|+..++ .+ . .+.+....++++. +.. .+..+|
T Consensus 221 ~~~~K~~~l~~l~~~~~-~~~~~~~~~GD~~-nD~~m~~~ag~~va~-~n-a---~~~~k~~a~~v~~~~~~~dGVa~~l 293 (301)
T 2b30_A 221 LGHDKYTGINYLLKHYN-ISNDQVLVVGDAE-NDIAMLSNFKYSFAV-AN-A---TDSAKSHAKCVLPVSHREGAVAYLL 293 (301)
T ss_dssp TTCCHHHHHHHHHHHTT-CCGGGEEEEECSG-GGHHHHHSCSEEEEC-TT-C---CHHHHHHSSEECSSCTTTTHHHHHH
T ss_pred CCCCcHHHHHHHHHHcC-CCHHHEEEECCCH-HHHHHHHHcCCeEEE-cC-C---cHHHHhhCCEEEccCCCCcHHHHHH
Confidence 34578899999999999 9999999999999 999999999997543 31 1 2334455667777 654 377777
Q ss_pred hhhh
Q 039449 247 TSEI 250 (253)
Q Consensus 247 ~~~~ 250 (253)
++.+
T Consensus 294 ~~~~ 297 (301)
T 2b30_A 294 KKVF 297 (301)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=99.24 E-value=1.6e-10 Score=92.69 Aligned_cols=128 Identities=15% Similarity=0.095 Sum_probs=81.8
Q ss_pred CCChHHHHHHHHHHHHHhCCC------------------------CCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhh
Q 039449 90 DYDEDTFEKIFRRIYASFGSS------------------------APYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQD 145 (253)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~ 145 (253)
.++.+++.....+++...... ..++++|++.++++.|+++|++++|+|++....++
T Consensus 173 GmT~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~v~~~~~~gir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~ 252 (385)
T 4gxt_A 173 NYKTEEVYDLCKGAYASMKKERIRVEEFVSPDIKSEAGRISIKYFVGIRTLDEMVDLYRSLEENGIDCYIVSASFIDIVR 252 (385)
T ss_dssp TCCHHHHHHHHHHHHHHHTTSCCEEEEEECCSSCCSSCCCEEEEEECCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHH
T ss_pred CCCHHHHHHHHHHHHHhccccccCceeeecccccccCceeEEeeccCceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHH
Confidence 356788888888877654321 12347999999999999999999999999999999
Q ss_pred hhhhhcCCCCCcceeEeee----ccccCc---------cCCCHHHHHHHHHHh---CCCCCCceEEEcCCcccchhhhhh
Q 039449 146 VILPALGVNQGTEWDFGVF----SGLEGV---------EKPDPRIYEIALERA---GNIAPEEALHIGDSFRKDYVPAKS 209 (253)
Q Consensus 146 ~~l~~~gl~~~~~f~~~~~----~~~~~~---------~kp~~~~~~~~~~~~---~~~~~~~~~~iGD~~~~Di~~a~~ 209 (253)
.+.+.+|+.-+..-+.++. ..+.+. .-...+.-..+++++ . +....++++|||. +|+.|.+.
T Consensus 253 ~ia~~lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~~~~gK~~~i~~~~~~~-~~~~~i~a~GDs~-~D~~ML~~ 330 (385)
T 4gxt_A 253 AFATDTNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPISIREGKVQTINKLIKND-RNYGPIMVGGDSD-GDFAMLKE 330 (385)
T ss_dssp HHHHCTTSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCCSTHHHHHHHHHHTCCT-TEECCSEEEECSG-GGHHHHHH
T ss_pred HHHHHhCcccCCCcceEEEeEEEEecCCceeeeecCccceeCCCchHHHHHHHHHhc-CCCCcEEEEECCH-hHHHHHhc
Confidence 9999887532111122111 111110 011222233333332 2 4456799999999 99999997
Q ss_pred cCC-eE-EEEcC
Q 039449 210 VGM-HA-LLVDR 219 (253)
Q Consensus 210 ~G~-~~-i~~~~ 219 (253)
.+- .. +.+++
T Consensus 331 ~~~~~~~liinr 342 (385)
T 4gxt_A 331 FDHTDLSLIIHR 342 (385)
T ss_dssp CTTCSEEEEECC
T ss_pred CccCceEEEEcC
Confidence 533 22 44554
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.18 E-value=2.8e-12 Score=93.29 Aligned_cols=96 Identities=14% Similarity=0.120 Sum_probs=84.6
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCc
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEE 192 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 192 (253)
..++||+.++|+++++. ++++|+|++....++.+++.+++.. +|..+++.++....| ..+.+.++.+| .++++
T Consensus 67 v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~--~f~~~l~rd~~~~~k---~~~lK~L~~Lg-~~~~~ 139 (195)
T 2hhl_A 67 VLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWG--VFRARLFRESCVFHR---GNYVKDLSRLG-RELSK 139 (195)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSS--CEEEEECGGGCEEET---TEEECCGGGSS-SCGGG
T ss_pred EEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCcc--cEEEEEEcccceecC---CceeeeHhHhC-CChhH
Confidence 36789999999999998 9999999999999999999999988 899988877665544 45667889999 99999
Q ss_pred eEEEcCCcccchhhhhhcCCeEEE
Q 039449 193 ALHIGDSFRKDYVPAKSVGMHALL 216 (253)
Q Consensus 193 ~~~iGD~~~~Di~~a~~~G~~~i~ 216 (253)
|++|||++ +++.++.++|+.++.
T Consensus 140 ~vivDDs~-~~~~~~~~ngi~i~~ 162 (195)
T 2hhl_A 140 VIIVDNSP-ASYIFHPENAVPVQS 162 (195)
T ss_dssp EEEEESCG-GGGTTCGGGEEECCC
T ss_pred EEEEECCH-HHhhhCccCccEEee
Confidence 99999999 899999999988643
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=99.18 E-value=2.3e-12 Score=92.79 Aligned_cols=94 Identities=17% Similarity=0.152 Sum_probs=82.3
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCc
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEE 192 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 192 (253)
..++||+.++|+++++. ++++|+|++....++.+++.++... +|..+++.+.....| ..+.+.++.+| .++++
T Consensus 54 v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~~--~f~~~~~rd~~~~~k---~~~~k~L~~Lg-~~~~~ 126 (181)
T 2ght_A 54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWG--AFRARLFRESCVFHR---GNYVKDLSRLG-RDLRR 126 (181)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTTC--CEEEEECGGGSEEET---TEEECCGGGTC-SCGGG
T ss_pred EEeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCCC--cEEEEEeccCceecC---CcEeccHHHhC-CCcce
Confidence 36789999999999998 9999999999999999999999987 899888766654433 34566788999 99999
Q ss_pred eEEEcCCcccchhhhhhcCCeE
Q 039449 193 ALHIGDSFRKDYVPAKSVGMHA 214 (253)
Q Consensus 193 ~~~iGD~~~~Di~~a~~~G~~~ 214 (253)
|++|||++ .++.++.++|+..
T Consensus 127 ~vivdDs~-~~~~~~~~ngi~i 147 (181)
T 2ght_A 127 VLILDNSP-ASYVFHPDNAVPV 147 (181)
T ss_dssp EEEECSCG-GGGTTCTTSBCCC
T ss_pred EEEEeCCH-HHhccCcCCEeEe
Confidence 99999999 8999999999984
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=4.4e-12 Score=97.06 Aligned_cols=45 Identities=16% Similarity=0.059 Sum_probs=42.2
Q ss_pred CCCHHHHHHHHHHhCCCCC--CceEEEcCCcccchhhhhhcCCeEEEEc
Q 039449 172 KPDPRIYEIALERAGNIAP--EEALHIGDSFRKDYVPAKSVGMHALLVD 218 (253)
Q Consensus 172 kp~~~~~~~~~~~~~~~~~--~~~~~iGD~~~~Di~~a~~~G~~~i~~~ 218 (253)
++|+.+++.+++.++ +++ +++++|||+. ||+.|++.+|+..++-+
T Consensus 175 ~~K~~~l~~l~~~~~-i~~~~~~~~~~GD~~-nD~~m~~~ag~~va~~n 221 (259)
T 3zx4_A 175 ADKGRAVARLRALWP-DPEEARFAVGLGDSL-NDLPLFRAVDLAVYVGR 221 (259)
T ss_dssp CCHHHHHHHHHHTCS-SHHHHTSEEEEESSG-GGHHHHHTSSEEEECSS
T ss_pred CCHHHHHHHHHHHhC-CCCCCceEEEEeCCH-HHHHHHHhCCCeEEeCC
Confidence 788999999999999 998 9999999999 99999999999877765
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.12 E-value=1.2e-10 Score=90.74 Aligned_cols=95 Identities=18% Similarity=0.078 Sum_probs=64.9
Q ss_pred CCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEee----eccccC------------ccCCCH
Q 039449 112 PYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGV----FSGLEG------------VEKPDP 175 (253)
Q Consensus 112 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~----~~~~~~------------~~kp~~ 175 (253)
..++.||+.++++.|++.|++++++|++....++.+++.+|+.. ....++ ..+..+ ..|+.+
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~--~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~~ 216 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYH--SNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDG 216 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCC--TTEEEEEECEEECTTSBEEEECSSCCCTTCHHHH
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCc--ccceEEeeeEEEcccceeEeccccccchhhcccH
Confidence 35888999999999999999999999999999999999999864 211111 111111 011112
Q ss_pred HHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhc
Q 039449 176 RIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSV 210 (253)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~ 210 (253)
..-......+. -+.++++++||+. ||+.|++.+
T Consensus 217 ~~k~~~~~~~~-~~~~~v~~vGDGi-NDa~m~k~l 249 (297)
T 4fe3_A 217 ALKNTDYFSQL-KDNSNIILLGDSQ-GDLRMADGV 249 (297)
T ss_dssp HHTCHHHHHHT-TTCCEEEEEESSG-GGGGTTTTC
T ss_pred HHHHHHHHHhh-ccCCEEEEEeCcH-HHHHHHhCc
Confidence 11112233344 4567899999999 999997743
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=99.05 E-value=4.1e-10 Score=85.51 Aligned_cols=65 Identities=17% Similarity=0.135 Sum_probs=48.6
Q ss_pred cCCCHHHHHHHHHHhCCC-CCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHH
Q 039449 171 EKPDPRIYEIALERAGNI-APEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVA 241 (253)
Q Consensus 171 ~kp~~~~~~~~~~~~~~~-~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~e 241 (253)
.-.|..+++.+++.++ + +++++++|||+. ||+.|++.+|+..++-+. ..+.+....++++++..+
T Consensus 177 g~sKg~al~~l~~~~~-~~~~~~viafGD~~-NDi~Ml~~ag~~va~gna----~~~~~~~~a~~v~~~~~~ 242 (249)
T 2zos_A 177 NSDKGKAAKILLDFYK-RLGQIESYAVGDSY-NDFPMFEVVDKVFIVGSL----KHKKAQNVSSIIDVLEVI 242 (249)
T ss_dssp SCCHHHHHHHHHHHHH-TTSCEEEEEEECSG-GGHHHHTTSSEEEEESSC----CCTTEEEESSHHHHHHHH
T ss_pred CCChHHHHHHHHHHhc-cCCCceEEEECCCc-ccHHHHHhCCcEEEeCCC----CccccchhceEEeccccc
Confidence 4567899999999999 8 999999999999 999999999998665442 112233345556555443
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.97 E-value=2e-10 Score=88.57 Aligned_cols=77 Identities=8% Similarity=0.010 Sum_probs=39.2
Q ss_pred ccCCCHHHHHHHHHHhCCCCCCc--eEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhc--CC-cccCCHHH--H
Q 039449 170 VEKPDPRIYEIALERAGNIAPEE--ALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKS--GA-IVLPDLVA--V 242 (253)
Q Consensus 170 ~~kp~~~~~~~~~~~~~~~~~~~--~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~--~~-~~i~~l~e--l 242 (253)
...+|..+++.+++.++.+++++ +++|||+. ||+.|++.+|+..++-+ .....+.+... .+ +++++..+ +
T Consensus 186 ~~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~-nD~~m~~~ag~~va~~n--~~~~~~~~~~~~~a~~~v~~~~~~dGV 262 (275)
T 1xvi_A 186 ASAGKDQAANWIIATYQQLSGKRPTTLGLGDGP-NDAPLLEVMDYAVIVKG--LNREGVHLHDEDPARVWRTQREGPEGW 262 (275)
T ss_dssp TTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSG-GGHHHHHTSSEEEECCC--CC-------------------------
T ss_pred CCCCHHHHHHHHHHHhhhcccccCcEEEECCCh-hhHHHHHhCCceEEecC--CCccchhhccccCCceeEccCCCchHH
Confidence 34678899999999874146778 99999999 99999999999744433 22112233222 34 56655443 5
Q ss_pred HHHHhhh
Q 039449 243 KEFLTSE 249 (253)
Q Consensus 243 ~~~l~~~ 249 (253)
..+|++.
T Consensus 263 a~~l~~~ 269 (275)
T 1xvi_A 263 REGLDHF 269 (275)
T ss_dssp -------
T ss_pred HHHHHHH
Confidence 5555543
|
| >2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=2.8e-09 Score=87.55 Aligned_cols=104 Identities=20% Similarity=0.224 Sum_probs=80.0
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhc-CCC----------CC-cceeEeeeccccCccC----C----
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPAL-GVN----------QG-TEWDFGVFSGLEGVEK----P---- 173 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~-gl~----------~~-~~f~~~~~~~~~~~~k----p---- 173 (253)
...|.+.++|..+++.| +++++||+....+...++.+ |.. +| .+|+.+++........ |
T Consensus 246 ~kdp~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~A~KP~FF~~~~pfr~V 324 (555)
T 2jc9_A 246 VKDGKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDARKPLFFGEGTVLRQV 324 (555)
T ss_dssp CCCTHHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEESCCTTGGGTTCCCEEEE
T ss_pred CCChHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCCCccccccccccchhhhCCEEEEeCCCCCcccCCCcceEe
Confidence 34577899999999999 99999999999999988887 631 11 2677755543321100 0
Q ss_pred -----------------CHHH-----HHHHHHHhCCCCCCceEEEcCCcccchhhhh-hcCCeEEEEcC
Q 039449 174 -----------------DPRI-----YEIALERAGNIAPEEALHIGDSFRKDYVPAK-SVGMHALLVDR 219 (253)
Q Consensus 174 -----------------~~~~-----~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~-~~G~~~i~~~~ 219 (253)
+... +..+++.+| .+.+++++|||+..+||..++ .+|+.+++|-+
T Consensus 325 d~~tg~l~~~~~~~~l~~g~vY~gGn~~~~~~llg-~~g~eVLYVGDhIftDIl~~kk~~GWrTiLViP 392 (555)
T 2jc9_A 325 DTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLG-AKGKDILYIGDHIFGDILKSKKRQGWRTFLVIP 392 (555)
T ss_dssp ETTTTEECSSCCCSCCCTTCCEEECCHHHHHHHHT-CCGGGEEEEESCCCCCCHHHHHHHCCEEEEECT
T ss_pred ecCCCccccccccccccCCceeccCCHHHHHHHhC-CCCCeEEEECCEehHhHHhHHhhcCeEEEEEEe
Confidence 0011 478889999 999999999999999999997 99999999984
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.81 E-value=1.3e-08 Score=87.27 Aligned_cols=113 Identities=19% Similarity=0.260 Sum_probs=86.0
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCce
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEA 193 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 193 (253)
++.|++.+.+++|++.|++++++|+.....+..+.+.+|++. + ++.... ..|. .+++.+. .. +++
T Consensus 457 ~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~--~-----~~~~~P--~~K~----~~v~~l~-~~-~~v 521 (645)
T 3j08_A 457 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL--V-----IAEVLP--HQKS----EEVKKLQ-AK-EVV 521 (645)
T ss_dssp CCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE--E-----ECSCCT--TCHH----HHHHHHT-TT-CCE
T ss_pred CchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE--E-----EEeCCH--HhHH----HHHHHHh-hC-CeE
Confidence 467999999999999999999999999999999999999986 3 332221 2222 4566666 44 899
Q ss_pred EEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCccc--CCHHHHHHHHh
Q 039449 194 LHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVL--PDLVAVKEFLT 247 (253)
Q Consensus 194 ~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i--~~l~el~~~l~ 247 (253)
++|||+. ||+.+.+.+|+..++-+. . +...+..++++ .+++.+..+++
T Consensus 522 ~~vGDg~-ND~~al~~A~vgiamg~g--~---~~a~~~AD~vl~~~~~~~i~~~i~ 571 (645)
T 3j08_A 522 AFVGDGI-NDAPALAQADLGIAVGSG--S---DVAVESGDIVLIRDDLRDVVAAIQ 571 (645)
T ss_dssp EEEECSS-SCHHHHHHSSEEEEECCC--S---CCSSCCSSSEESSCCTTHHHHHHH
T ss_pred EEEeCCH-hHHHHHHhCCEEEEeCCC--c---HHHHHhCCEEEecCCHHHHHHHHH
Confidence 9999999 999999999987766532 1 12234456666 78888887775
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=98.74 E-value=3.2e-07 Score=71.93 Aligned_cols=68 Identities=15% Similarity=0.134 Sum_probs=53.0
Q ss_pred CCCCChHHHHHHHHHHHHHhCCC---------------CCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhh--
Q 039449 88 GYDYDEDTFEKIFRRIYASFGSS---------------APYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPA-- 150 (253)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-- 150 (253)
-...+.+++.....+++...... ....++|++.++++.|+++|++++|+|++....++.+.+.
T Consensus 102 ~aGmT~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~ 181 (327)
T 4as2_A 102 FSGFTLRELKGYVDELMAYGKPIPATYYDGDKLATLDVEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPR 181 (327)
T ss_dssp TTTSBHHHHHHHHHHHHHHCSCEEEEEEETTEEEEEEECCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGG
T ss_pred HcCCCHHHHHHHHHHHHHhccccccccccccccccccccccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcc
Confidence 34557788888888877643210 1236899999999999999999999999999999988876
Q ss_pred --cCCCC
Q 039449 151 --LGVNQ 155 (253)
Q Consensus 151 --~gl~~ 155 (253)
.|+++
T Consensus 182 ~~ygIp~ 188 (327)
T 4as2_A 182 YGYNAKP 188 (327)
T ss_dssp GSCCCCG
T ss_pred cccCCCH
Confidence 56665
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.67 E-value=5e-08 Score=84.80 Aligned_cols=113 Identities=19% Similarity=0.275 Sum_probs=85.9
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCce
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEA 193 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 193 (253)
++.|++.+.++.|++.|++++++|+.....+..+.+.+|++. +++.... ..| ..+++.+. -. +++
T Consensus 535 ~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~-------~~~~~~P--~~K----~~~v~~l~-~~-~~v 599 (723)
T 3j09_A 535 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL-------VIAEVLP--HQK----SEEVKKLQ-AK-EVV 599 (723)
T ss_dssp CSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-------EECSCCT--TCH----HHHHHHHT-TT-CCE
T ss_pred CcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCcE-------EEccCCH--HHH----HHHHHHHh-cC-CeE
Confidence 567999999999999999999999999999999999999986 3333222 222 34566666 44 899
Q ss_pred EEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCccc--CCHHHHHHHHh
Q 039449 194 LHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVL--PDLVAVKEFLT 247 (253)
Q Consensus 194 ~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i--~~l~el~~~l~ 247 (253)
++|||+. ||+.+.+.+|+..++-+ +. +...+..++++ .+++.+..+++
T Consensus 600 ~~vGDg~-ND~~al~~A~vgiamg~--g~---~~a~~~AD~vl~~~~~~~i~~~i~ 649 (723)
T 3j09_A 600 AFVGDGI-NDAPALAQADLGIAVGS--GS---DVAVESGDIVLIRDDLRDVVAAIQ 649 (723)
T ss_dssp EEEECSS-TTHHHHHHSSEEEECCC--CS---CCSSCCSSEECSSCCTTHHHHHHH
T ss_pred EEEECCh-hhHHHHhhCCEEEEeCC--Cc---HHHHHhCCEEEeCCCHHHHHHHHH
Confidence 9999999 99999999997766543 21 22234566666 68888887775
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=98.57 E-value=1.5e-07 Score=81.68 Aligned_cols=114 Identities=11% Similarity=0.107 Sum_probs=85.4
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCce
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEA 193 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 193 (253)
++.|++.+.+++|++.|++++++|+.....+..+.+.+|++. + .+.. .|+-...+++.+. -..+.+
T Consensus 554 ~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~--v-----~a~~------~P~~K~~~v~~l~-~~g~~V 619 (736)
T 3rfu_A 554 PIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKK--V-----VAEI------MPEDKSRIVSELK-DKGLIV 619 (736)
T ss_dssp CBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCC--E-----ECSC------CHHHHHHHHHHHH-HHSCCE
T ss_pred cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCE--E-----EEec------CHHHHHHHHHHHH-hcCCEE
Confidence 467899999999999999999999999999999999999987 2 2222 2333444555555 445789
Q ss_pred EEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCccc--CCHHHHHHHHh
Q 039449 194 LHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVL--PDLVAVKEFLT 247 (253)
Q Consensus 194 ~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i--~~l~el~~~l~ 247 (253)
+||||+. ||+.+.+.+|+..++-+ +. +...+..++++ .+++.+...++
T Consensus 620 ~~vGDG~-ND~paL~~AdvGIAmg~--g~---d~a~~~AD~vl~~~~~~~i~~ai~ 669 (736)
T 3rfu_A 620 AMAGDGV-NDAPALAKADIGIAMGT--GT---DVAIESAGVTLLHGDLRGIAKARR 669 (736)
T ss_dssp EEEECSS-TTHHHHHHSSEEEEESS--SC---SHHHHHCSEEECSCCSTTHHHHHH
T ss_pred EEEECCh-HhHHHHHhCCEEEEeCC--cc---HHHHHhCCEEEccCCHHHHHHHHH
Confidence 9999999 99999999998877753 21 22344566555 56777776665
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=98.48 E-value=2.3e-07 Score=83.53 Aligned_cols=124 Identities=13% Similarity=0.071 Sum_probs=87.0
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCccee----EeeeccccC------------------cc
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWD----FGVFSGLEG------------------VE 171 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~----~~~~~~~~~------------------~~ 171 (253)
++.|++.+.++.|++.|++++++|+.....+..+.+.+|+.. ... .++...+.. .-
T Consensus 603 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~--~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~ 680 (995)
T 3ar4_A 603 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFG--ENEEVADRAYTGREFDDLPLAEQREACRRACCFARV 680 (995)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSC--TTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESC
T ss_pred CCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCC--CCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEe
Confidence 467999999999999999999999999999999999999965 211 111111110 01
Q ss_pred CCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCccc--CCHHHHHHHHhh
Q 039449 172 KPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVL--PDLVAVKEFLTS 248 (253)
Q Consensus 172 kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i--~~l~el~~~l~~ 248 (253)
.| +--..+++.+. -..+.++|+||+. ||+.+.++|++..++-+ + .+......++++ +++..+..++.+
T Consensus 681 ~P--~~K~~~v~~l~-~~g~~v~~~GDG~-ND~~alk~Advgiamg~--g---~~~ak~aAd~vl~~~~~~~i~~~i~~ 750 (995)
T 3ar4_A 681 EP--SHKSKIVEYLQ-SYDEITAMTGDGV-NDAPALKKAEIGIAMGS--G---TAVAKTASEMVLADDNFSTIVAAVEE 750 (995)
T ss_dssp CS--SHHHHHHHHHH-TTTCCEEEEECSG-GGHHHHHHSTEEEEETT--S---CHHHHHTCSEEETTCCHHHHHHHHHH
T ss_pred CH--HHHHHHHHHHH-HCCCEEEEEcCCc-hhHHHHHHCCeEEEeCC--C---CHHHHHhCCEEECCCCHHHHHHHHHH
Confidence 12 22334445554 3457899999999 99999999999887632 2 223345567766 569998887754
|
| >4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A | Back alignment and structure |
|---|
Probab=98.48 E-value=1.6e-06 Score=70.48 Aligned_cols=101 Identities=21% Similarity=0.204 Sum_probs=74.3
Q ss_pred CCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhc---------CCCCCcceeEeeeccccCc----------------
Q 039449 116 FPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPAL---------GVNQGTEWDFGVFSGLEGV---------------- 170 (253)
Q Consensus 116 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~---------gl~~~~~f~~~~~~~~~~~---------------- 170 (253)
.|.+..+|+.|++.|.++.++||+...++...+.++ .+.+ +||.+++......
T Consensus 188 ~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrd--lFDvVIv~A~KP~FF~~~~~~~~v~~~~g 265 (470)
T 4g63_A 188 EKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQG--LFEFVITLANKPRFFYDNLRFLSVNPENG 265 (470)
T ss_dssp CHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHTGGGSCTTCCGGG--GCSEEEESCCTTHHHHSCCCEEEECTTTC
T ss_pred CHhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhhcccCCCCCCChhh--hcCEEEECCCCCCcccCCCcceEEECCCC
Confidence 467889999999999999999999999888777664 2344 8888777543210
Q ss_pred -----c---CCC---HHHHHHHHHHhCCCCCCceEEEcCCcccchhhhh-hcCCeEEEEcC
Q 039449 171 -----E---KPD---PRIYEIALERAGNIAPEEALHIGDSFRKDYVPAK-SVGMHALLVDR 219 (253)
Q Consensus 171 -----~---kp~---~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~-~~G~~~i~~~~ 219 (253)
. +|. .--...+.+.+| ....+|++|||+...||..++ ..|+.|+.|-.
T Consensus 266 ~l~~~~~~~~~~vY~gGn~~~l~~llg-~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~ 325 (470)
T 4g63_A 266 TMTNVHGPIVPGVYQGGNAKKFTEDLG-VGGDEILYIGDHIYGDILRLKKDCNWRTALVVE 325 (470)
T ss_dssp CEEECCSSCCSEEEEECCHHHHHHHTT-CCGGGEEEEESCCCSCHHHHHHSCCCEEEEECT
T ss_pred cccccccccCCceeecCcHHHHHHHhC-CCCCeEEEECCchHHHHHhhhhccCCeEEEEhH
Confidence 0 110 111234566678 888999999999999987666 57999999984
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=98.26 E-value=4.9e-06 Score=75.16 Aligned_cols=129 Identities=11% Similarity=0.050 Sum_probs=85.7
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCc--c--------------------eeEeeecccc---
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGT--E--------------------WDFGVFSGLE--- 168 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~--~--------------------f~~~~~~~~~--- 168 (253)
++.|++.+.+++|++.|++++++|+.....+..+.+.+|+.... . +..++...+.
T Consensus 599 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~~ 678 (1028)
T 2zxe_A 599 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDL 678 (1028)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTTC
T ss_pred CCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhhC
Confidence 46799999999999999999999999999999999999986310 0 0111111100
Q ss_pred ---------------CccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCC
Q 039449 169 ---------------GVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGA 233 (253)
Q Consensus 169 ---------------~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~ 233 (253)
......|+-...+.+.+. -..+.++++||+. ||+.|.++|++..++-. .+ .+...+..+
T Consensus 679 ~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq-~~g~~V~~iGDG~-ND~paLk~AdvGIAmg~-~g---td~ak~aAD 752 (1028)
T 2zxe_A 679 STEVLDDILHYHTEIVFARTSPQQKLIIVEGCQ-RQGAIVAVTGDGV-NDSPALKKADIGVAMGI-SG---SDVSKQAAD 752 (1028)
T ss_dssp CHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHH-HTTCCEEEEECSG-GGHHHHHHSSEEEEESS-SC---CHHHHHHCS
T ss_pred CHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHH-hCCCEEEEEcCCc-chHHHHHhCCceEEeCC-cc---CHHHHHhcC
Confidence 011223444444444443 2336799999999 99999999999988732 12 222344566
Q ss_pred cccC--CHHHHHHHHhh
Q 039449 234 IVLP--DLVAVKEFLTS 248 (253)
Q Consensus 234 ~~i~--~l~el~~~l~~ 248 (253)
+++. +++.+..++.+
T Consensus 753 ~Vl~~~~~~~I~~~i~~ 769 (1028)
T 2zxe_A 753 MILLDDNFASIVTGVEE 769 (1028)
T ss_dssp EEETTCCTHHHHHHHHH
T ss_pred EEecCCCHHHHHHHHHH
Confidence 6654 48888777754
|
| >3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=98.24 E-value=4.1e-07 Score=72.29 Aligned_cols=94 Identities=13% Similarity=0.090 Sum_probs=67.7
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeee-ccccCccCCCHHHHHHHHHHh-CCCCC
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVF-SGLEGVEKPDPRIYEIALERA-GNIAP 190 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~-~~~~~~~kp~~~~~~~~~~~~-~~~~~ 190 (253)
+...||+.++|+++. +++.++|.|++....+..+++.++... .+|...++ .+..+. .+.+-++.+ + .++
T Consensus 74 v~~RPg~~eFL~~l~-~~yeivI~Tas~~~yA~~vl~~LDp~~-~~f~~ri~sr~~~g~------~~~KdL~~L~~-~dl 144 (372)
T 3ef0_A 74 IKFRPGLAQFLQKIS-ELYELHIYTMGTKAYAKEVAKIIDPTG-KLFQDRVLSRDDSGS------LAQKSLRRLFP-CDT 144 (372)
T ss_dssp EEECTTHHHHHHHHH-TTEEEEEECSSCHHHHHHHHHHHCTTS-CSSSSCEECTTTSSC------SSCCCGGGTCS-SCC
T ss_pred EEECcCHHHHHHHHh-cCcEEEEEeCCcHHHHHHHHHHhccCC-ceeeeEEEEecCCCC------cceecHHHhcC-CCC
Confidence 467899999999999 669999999999999999999998764 35653344 333332 112235555 8 899
Q ss_pred CceEEEcCCcccchhhhhhcCCeEEEEcCC
Q 039449 191 EEALHIGDSFRKDYVPAKSVGMHALLVDRF 220 (253)
Q Consensus 191 ~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~ 220 (253)
++|++|+|++ .-. ... . ..|.+.++
T Consensus 145 ~~viiiDd~~-~~~-~~~--p-N~I~i~~~ 169 (372)
T 3ef0_A 145 SMVVVIDDRG-DVW-DWN--P-NLIKVVPY 169 (372)
T ss_dssp TTEEEEESCS-GGG-TTC--T-TEEECCCC
T ss_pred ceEEEEeCCH-HHc-CCC--C-cEeeeCCc
Confidence 9999999999 333 222 3 66766643
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=98.23 E-value=2.4e-06 Score=58.26 Aligned_cols=40 Identities=15% Similarity=-0.031 Sum_probs=31.2
Q ss_pred CCChHHHHHHHHHcCCEEEEEeCCCc---chhhhhhhhcCCCC
Q 039449 116 FPDSQPFLRWAREKGLIVGIISNAEY---RYQDVILPALGVNQ 155 (253)
Q Consensus 116 ~~~~~~~l~~l~~~g~~~~i~s~~~~---~~~~~~l~~~gl~~ 155 (253)
.|++.+.|+.++++|+.++++|+.+. ..+...++..|+..
T Consensus 26 ~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~ 68 (142)
T 2obb_A 26 IPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEF 68 (142)
T ss_dssp CTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCC
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCe
Confidence 46888999999999999999999974 33455566677653
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=98.12 E-value=3.8e-06 Score=74.49 Aligned_cols=125 Identities=15% Similarity=0.075 Sum_probs=83.6
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCccee--Eeeec-----------------cccCccCCC
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWD--FGVFS-----------------GLEGVEKPD 174 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~--~~~~~-----------------~~~~~~kp~ 174 (253)
++.|++.+.+++|++.|++++++|+.....+..+.+.+|+... .++ ..... .....-.|
T Consensus 535 p~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~-~~~~~~~~~~g~~~~~~~el~~~~~~~~V~arv~P- 612 (920)
T 1mhs_A 535 PPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTN-IYNAERLGLGGGGDMPGSEVYDFVEAADGFAEVFP- 612 (920)
T ss_dssp CCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCS-CCCSSSSSSCBCCCGGGGGGGTTTTTTSCEESCCS-
T ss_pred cccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCcc-ccCccceeecCcccCCHHHHHHHHhhCeEEEEeCH-
Confidence 4678899999999999999999999999999999999999630 000 00000 00011123
Q ss_pred HHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCccc--CCHHHHHHHHhh
Q 039449 175 PRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVL--PDLVAVKEFLTS 248 (253)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i--~~l~el~~~l~~ 248 (253)
+--..+.+.+. -..+.+.|+||+. ||..+.++++++.++-+ + .+...+..++++ ++++.+...+..
T Consensus 613 -~~K~~iV~~Lq-~~g~~Vam~GDGv-NDapaLk~AdvGIAmg~--g---td~ak~aADiVl~~~~~~~I~~ai~~ 680 (920)
T 1mhs_A 613 -QHKYNVVEILQ-QRGYLVAMTGDGV-NDAPSLKKADTGIAVEG--S---SDAARSAADIVFLAPGLGAIIDALKT 680 (920)
T ss_dssp -THHHHHHHHHH-TTTCCCEECCCCG-GGHHHHHHSSEEEEETT--S---CHHHHHSSSEEESSCCSHHHHHHHHH
T ss_pred -HHHHHHHHHHH-hCCCeEEEEcCCc-ccHHHHHhCCcCccccc--c---cHHHHHhcCeEEcCCCHHHHHHHHHH
Confidence 22233444443 3347899999999 99999999999988742 2 223344566554 577777777653
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.02 E-value=5.6e-06 Score=62.42 Aligned_cols=72 Identities=13% Similarity=0.043 Sum_probs=54.2
Q ss_pred ccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhc-------CCcccCCHHH-
Q 039449 170 VEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKS-------GAIVLPDLVA- 241 (253)
Q Consensus 170 ~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~-------~~~~i~~l~e- 241 (253)
..-+|+.+++.+++.++ ++++++++|||+. ||+.|++.+|+..++ . .. .+.+... .++++++..+
T Consensus 159 ~~~~K~~~l~~l~~~~~-~~~~~~~~~GD~~-nD~~m~~~~g~~va~-~-na---~~~~k~~a~~~~~~a~~v~~~~~~d 231 (244)
T 1s2o_A 159 QRSNKGNATQYLQQHLA-MEPSQTLVCGDSG-NDIGLFETSARGVIV-R-NA---QPELLHWYDQWGDSRHYRAQSSHAG 231 (244)
T ss_dssp TTCSHHHHHHHHHHHTT-CCGGGEEEEECSG-GGHHHHTSSSEEEEC-T-TC---CHHHHHHHHHHCCTTEEECSSCHHH
T ss_pred CCCChHHHHHHHHHHhC-CCHHHEEEECCch-hhHHHHhccCcEEEE-c-CC---cHHHHHHHhcccccceeecCCcchh
Confidence 44678899999999999 9999999999999 999999999986444 2 11 2333442 4567776654
Q ss_pred -HHHHHhh
Q 039449 242 -VKEFLTS 248 (253)
Q Consensus 242 -l~~~l~~ 248 (253)
+...|++
T Consensus 232 Gva~~i~~ 239 (244)
T 1s2o_A 232 AILEAIAH 239 (244)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 6666665
|
| >3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118} | Back alignment and structure |
|---|
Probab=98.02 E-value=1.6e-06 Score=63.04 Aligned_cols=94 Identities=13% Similarity=0.100 Sum_probs=71.4
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCce
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEA 193 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 193 (253)
...||+.++|+++. ++++++|.|.+....++.+++.++... .+|...++.+....... .+.+.++.+| .++++|
T Consensus 59 ~~RPgl~eFL~~l~-~~yeivI~Tas~~~ya~~vl~~LDp~~-~~f~~rl~R~~c~~~~g---~y~KdL~~Lg-rdl~~v 132 (204)
T 3qle_A 59 AKRPGADYFLGYLS-QYYEIVLFSSNYMMYSDKIAEKLDPIH-AFVSYNLFKEHCVYKDG---VHIKDLSKLN-RDLSKV 132 (204)
T ss_dssp EECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHHHHTSTTC-SSEEEEECGGGSEEETT---EEECCGGGSC-SCGGGE
T ss_pred EeCCCHHHHHHHHH-hCCEEEEEcCCcHHHHHHHHHHhCCCC-CeEEEEEEecceeEECC---eeeecHHHhC-CChHHE
Confidence 67899999999998 669999999999999999999998762 27777666544322111 1334577888 999999
Q ss_pred EEEcCCcccchhhhhhcCCeE
Q 039449 194 LHIGDSFRKDYVPAKSVGMHA 214 (253)
Q Consensus 194 ~~iGD~~~~Di~~a~~~G~~~ 214 (253)
++|+|++ +-+......|+..
T Consensus 133 IiIDDsp-~~~~~~p~N~I~I 152 (204)
T 3qle_A 133 IIIDTDP-NSYKLQPENAIPM 152 (204)
T ss_dssp EEEESCT-TTTTTCGGGEEEC
T ss_pred EEEECCH-HHHhhCccCceEe
Confidence 9999999 6776655555443
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=97.93 E-value=3.4e-05 Score=69.87 Aligned_cols=127 Identities=9% Similarity=0.066 Sum_probs=82.2
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcc----------------------eeEeeeccccC--
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTE----------------------WDFGVFSGLEG-- 169 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~----------------------f~~~~~~~~~~-- 169 (253)
++.|++.+.+++|++.|++++++|+.....+..+.+.+|+..... ...++......
T Consensus 604 p~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~ 683 (1034)
T 3ixz_A 604 PPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDM 683 (1034)
T ss_pred CCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhhhC
Confidence 467899999999999999999999999999988999888853000 00011110000
Q ss_pred ----------------ccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEE-cCCCCCChhhhhhcC
Q 039449 170 ----------------VEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLV-DRFKTPDAKEWRKSG 232 (253)
Q Consensus 170 ----------------~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~-~~~~~~~~~~~~~~~ 232 (253)
...-.|+-...+.+.+. -..+.++++||+. ||+.|.+.||++.++- +. .+...+..
T Consensus 684 ~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq-~~g~~V~a~GDG~-ND~~mLk~A~vGIAMg~ng-----~d~aK~aA 756 (1034)
T 3ixz_A 684 DPSELVEALRTHPEMVFARTSPQQKLVIVESCQ-RLGAIVAVTGDGV-NDSPALKKADIGVAMGIAG-----SDAAKNAA 756 (1034)
T ss_pred CHHHHHHHHHhCCceEEEecCHHHHHHHHHHHH-HcCCEEEEECCcH-HhHHHHHHCCeeEEeCCcc-----CHHHHHhc
Confidence 00112333333444443 3335799999999 9999999999998874 31 23334556
Q ss_pred CcccC--CHHHHHHHHh
Q 039449 233 AIVLP--DLVAVKEFLT 247 (253)
Q Consensus 233 ~~~i~--~l~el~~~l~ 247 (253)
++++. +++.+..+++
T Consensus 757 D~Vl~~~~~~gI~~ai~ 773 (1034)
T 3ixz_A 757 DMILLDDNFASIVTGVE 773 (1034)
T ss_pred CEEeccCCchHHHHHHH
Confidence 66554 4566666664
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.93 E-value=7.3e-06 Score=72.59 Aligned_cols=128 Identities=17% Similarity=0.133 Sum_probs=83.9
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeecccc-----------------CccCCCHH
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLE-----------------GVEKPDPR 176 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~-----------------~~~kp~~~ 176 (253)
++.|++.+.+++|++.|++++++|+.....+..+.+.+|+.....-...+...+. ....-.|+
T Consensus 488 p~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P~ 567 (885)
T 3b8c_A 488 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFPE 567 (885)
T ss_dssp CCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCHH
T ss_pred ccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEEEECHH
Confidence 4568899999999999999999999999999999999998530000001111000 01122333
Q ss_pred HHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCccc--CCHHHHHHHHhh
Q 039449 177 IYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVL--PDLVAVKEFLTS 248 (253)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i--~~l~el~~~l~~ 248 (253)
--..+.+.+. -..+.+.|+||+. ||..+.+++++..++-+ + .+...+..++++ +++..+...+..
T Consensus 568 ~K~~iV~~lq-~~g~~Vam~GDGv-NDapaLk~AdvGIAmg~--g---td~ak~aADivl~~~~~~~I~~ai~~ 634 (885)
T 3b8c_A 568 HKYEIVKKLQ-ERKHIVGMTGDGV-NDAPALKKADIGIAVAD--A---TDAARGASDIVLTEPGLSVIISAVLT 634 (885)
T ss_dssp HHHHHHHHHH-HTTCCCCBCCCSS-TTHHHHHHSSSCCCCSS--S---HHHHGGGCSSCCSSCSHHHHTHHHHT
T ss_pred HHHHHHHHHH-HCCCeEEEEcCCc-hhHHHHHhCCEeEEeCC--c---cHHHHHhcceeeccCchhHHHHHHHH
Confidence 3334444443 2346899999999 99999999999877632 2 233344566555 458777776653
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=97.41 E-value=6.4e-05 Score=56.65 Aligned_cols=39 Identities=18% Similarity=0.083 Sum_probs=29.1
Q ss_pred CHHHHHHHHHHhCCCCCCceEEEcCC----cccchhhhhhcCCeEEEEc
Q 039449 174 DPRIYEIALERAGNIAPEEALHIGDS----FRKDYVPAKSVGMHALLVD 218 (253)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~iGD~----~~~Di~~a~~~G~~~i~~~ 218 (253)
|..+++.+++ +++++++|||+ . ||+.|.+.+|.-.+.+.
T Consensus 188 Kg~al~~L~~-----~~~ev~afGD~~~~g~-NDi~Ml~~a~~~g~~v~ 230 (246)
T 3f9r_A 188 KTYCLQFVED-----DFEEIHFFGDKTQEGG-NDYEIYTDKRTIGHKVT 230 (246)
T ss_dssp GGGGGGGTTT-----TCSEEEEEESCCSTTS-TTHHHHTCTTSEEEECS
T ss_pred HHHHHHHHHc-----CcccEEEEeCCCCCCC-CCHHHHhCCCccEEEeC
Confidence 3455555554 58899999996 8 99999999886555554
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=97.37 E-value=8e-05 Score=56.04 Aligned_cols=42 Identities=10% Similarity=-0.103 Sum_probs=32.4
Q ss_pred CCCHHHHHHHHHHhCCCCCCceEEEcC----CcccchhhhhhcCCeEEEEc
Q 039449 172 KPDPRIYEIALERAGNIAPEEALHIGD----SFRKDYVPAKSVGMHALLVD 218 (253)
Q Consensus 172 kp~~~~~~~~~~~~~~~~~~~~~~iGD----~~~~Di~~a~~~G~~~i~~~ 218 (253)
-.|..+++.+ ++ ++++++++||| +. ||+.|.+.+|.-.+.+.
T Consensus 187 ~~Kg~al~~l---~~-i~~~~viafGD~~~~~~-ND~~Ml~~a~~ag~av~ 232 (246)
T 2amy_A 187 WDKRYCLRHV---EN-DGYKTIYFFGDKTMPGG-NDHEIFTDPRTMGYSVT 232 (246)
T ss_dssp CSGGGGGGGT---TT-SCCSEEEEEECSCC----CCCHHHHCTTEEEEECS
T ss_pred CchHHHHHHH---hC-CCHHHEEEECCCCCCCC-CcHHHHHhCCcceEEee
Confidence 4455677776 88 99999999999 99 99999999997555544
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00013 Score=48.78 Aligned_cols=17 Identities=29% Similarity=0.470 Sum_probs=14.9
Q ss_pred ceEEEEecCCceeccCC
Q 039449 7 LRCITVDVTGTLLAYKG 23 (253)
Q Consensus 7 ~k~i~fD~DGTL~~~~~ 23 (253)
+|+|+||+||||+++..
T Consensus 1 ik~i~~DlDGTL~~~~~ 17 (126)
T 1xpj_A 1 MKKLIVDLDGTLTQANT 17 (126)
T ss_dssp CCEEEECSTTTTBCCCC
T ss_pred CCEEEEecCCCCCCCCC
Confidence 58999999999998764
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0003 Score=53.42 Aligned_cols=59 Identities=8% Similarity=0.008 Sum_probs=42.3
Q ss_pred cCCCHHHHHHHHHHhCCCCCCceEEEcC----CcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCC
Q 039449 171 EKPDPRIYEIALERAGNIAPEEALHIGD----SFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPD 238 (253)
Q Consensus 171 ~kp~~~~~~~~~~~~~~~~~~~~~~iGD----~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~ 238 (253)
.-.|..+++.+ ++ ++++++++||| +. ||+.|.+.+|...+.+. +..+.+....++++++
T Consensus 195 ~vsKg~al~~l---~g-i~~~~viafGDs~~~~~-NDi~Ml~~~~~~g~av~----NA~~~~k~~a~~v~~~ 257 (262)
T 2fue_A 195 GWDKRYCLDSL---DQ-DSFDTIHFFGNETSPGG-NDFEIFADPRTVGHSVV----SPQDTVQRCREIFFPE 257 (262)
T ss_dssp TCSTTHHHHHH---TT-SCCSEEEEEESCCSTTS-TTHHHHHSTTSEEEECS----SHHHHHHHHHHHHCTT
T ss_pred CCCHHHHHHHH---HC-CCHHHEEEECCCCCCCC-CCHHHHhcCccCcEEec----CCCHHHHHhhheeCCC
Confidence 34566888887 89 99999999999 89 99999999997555553 1233344444445444
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0005 Score=52.20 Aligned_cols=32 Identities=16% Similarity=0.122 Sum_probs=25.0
Q ss_pred cCceEEEEecCCceeccCCCHHHHHHHHHHHc
Q 039449 5 SRLRCITVDVTGTLLAYKGELGDYYCMAAKSV 36 (253)
Q Consensus 5 ~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~ 36 (253)
.++|+|+||+||||++....+.+....+++++
T Consensus 11 ~~~kli~~DlDGTLl~~~~~is~~~~~al~~l 42 (262)
T 2fue_A 11 KERVLCLFDVDGTLTPARQKIDPEVAAFLQKL 42 (262)
T ss_dssp --CEEEEEESBTTTBSTTSCCCHHHHHHHHHH
T ss_pred cCeEEEEEeCccCCCCCCCcCCHHHHHHHHHH
Confidence 45899999999999998877767777776665
|
| >3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0075 Score=44.41 Aligned_cols=92 Identities=13% Similarity=0.087 Sum_probs=69.4
Q ss_pred HHHHHHHHHc-CCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcC
Q 039449 120 QPFLRWAREK-GLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGD 198 (253)
Q Consensus 120 ~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD 198 (253)
...|.....+ +.--+++|++.-...-.++-.+|+...+..+.++.+...| |.+.|+.+.+++| +.-.-++|||
T Consensus 165 ~k~L~~i~sr~~~vNVLVTs~qLVPaLaK~LLygL~~~fpieNIYSa~kiG----KesCFerI~~RFG--~k~~yvvIGD 238 (274)
T 3geb_A 165 LKALNLINSRPNCVNVLVTTTQLIPALAKVLLYGLGSVFPIENIYSATKTG----KESCFERIMQRFG--RKAVYVVIGD 238 (274)
T ss_dssp HHHHHHHHHSTTEEEEEEESSCHHHHHHHHHHTTCTTTSCGGGEEETTTTC----HHHHHHHHHHHHC--TTSEEEEEES
T ss_pred HHHHHhhccCCceeEEEEecCchHHHHHHHHHhhcccceecccccchhhcC----HHHHHHHHHHHhC--CCceEEEECC
Confidence 3444444443 3455789988877666667778888855555666665554 5699999999998 4577899999
Q ss_pred CcccchhhhhhcCCeEEEEc
Q 039449 199 SFRKDYVPAKSVGMHALLVD 218 (253)
Q Consensus 199 ~~~~Di~~a~~~G~~~i~~~ 218 (253)
+. ..-++|++.++++.-+.
T Consensus 239 G~-eEe~AAk~~n~PFwrI~ 257 (274)
T 3geb_A 239 GV-EEEQGAKKHNMPFWRIS 257 (274)
T ss_dssp SH-HHHHHHHHTTCCEEECC
T ss_pred CH-HHHHHHHHcCCCeEEee
Confidence 99 69999999999998886
|
| >3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.00039 Score=54.19 Aligned_cols=97 Identities=15% Similarity=0.168 Sum_probs=64.3
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccc---cCc-cCCCHHHHHHHHHHh----
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGL---EGV-EKPDPRIYEIALERA---- 185 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~---~~~-~kp~~~~~~~~~~~~---- 185 (253)
...||+.++|+++.+. |.++|.|.+....+..+++.++......|...++.+. ... .+..+..+.+-++.+
T Consensus 164 ~~RP~l~eFL~~l~~~-yeivIfTas~~~ya~~vld~Ld~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~vKdLs~Lw~~~ 242 (320)
T 3shq_A 164 LMRPYLHEFLTSAYED-YDIVIWSATSMRWIEEKMRLLGVASNDNYKVMFYLDSTAMISVHVPERGVVDVKPLGVIWALY 242 (320)
T ss_dssp HBCTTHHHHHHHHHHH-EEEEEECSSCHHHHHHHHHHTTCTTCSSCCCCEEECGGGCEEEEETTTEEEEECCHHHHHHHC
T ss_pred EeCCCHHHHHHHHHhC-CEEEEEcCCcHHHHHHHHHHhCCCCCcceeEEEEEcCCccccccccCCCCEEEEEhHHhhccc
Confidence 3569999999999965 9999999999999999999998765221332222111 110 011111122335555
Q ss_pred -CCCCCCceEEEcCCcccchhhhhhcCCe
Q 039449 186 -GNIAPEEALHIGDSFRKDYVPAKSVGMH 213 (253)
Q Consensus 186 -~~~~~~~~~~iGD~~~~Di~~a~~~G~~ 213 (253)
| .+++++++|+|++ .-.......|+.
T Consensus 243 p~-rdl~~tIiIDdsp-~~~~~~p~NgI~ 269 (320)
T 3shq_A 243 KQ-YNSSNTIMFDDIR-RNFLMNPKSGLK 269 (320)
T ss_dssp TT-CCGGGEEEEESCG-GGGTTSGGGEEE
T ss_pred CC-CChhHEEEEeCCh-HHhccCcCceEE
Confidence 7 8899999999999 566665555543
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=96.68 E-value=0.0016 Score=48.60 Aligned_cols=63 Identities=10% Similarity=0.078 Sum_probs=47.2
Q ss_pred cCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhc--CCeEEEEcCCCCCChhhhhhcCCcccCC---HHHHHHH
Q 039449 171 EKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSV--GMHALLVDRFKTPDAKEWRKSGAIVLPD---LVAVKEF 245 (253)
Q Consensus 171 ~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~--G~~~i~~~~~~~~~~~~~~~~~~~~i~~---l~el~~~ 245 (253)
.-.|..+++.+++.++ +++|||+. ||+.|.+.+ |...++-+. .....+++.+ -+.+..+
T Consensus 158 ~~~Kg~al~~l~~~~g------via~GD~~-ND~~Ml~~a~~g~~vam~Na---------~~~A~~v~~~~~~~~gV~~~ 221 (239)
T 1u02_A 158 GVNKGSAIRSVRGERP------AIIAGDDA-TDEAAFEANDDALTIKVGEG---------ETHAKFHVADYIEMRKILKF 221 (239)
T ss_dssp TCCHHHHHHHHHTTSC------EEEEESSH-HHHHHHHTTTTSEEEEESSS---------CCCCSEEESSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhhCC------eEEEeCCC-ccHHHHHHhhCCcEEEECCC---------CCcceEEeCCCCCHHHHHHH
Confidence 3457788888887765 99999999 999999999 988888663 1234567777 5556666
Q ss_pred Hhhh
Q 039449 246 LTSE 249 (253)
Q Consensus 246 l~~~ 249 (253)
|++.
T Consensus 222 l~~~ 225 (239)
T 1u02_A 222 IEML 225 (239)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=96.28 E-value=0.0016 Score=48.60 Aligned_cols=15 Identities=33% Similarity=0.507 Sum_probs=12.8
Q ss_pred ceEEEEecCCceecc
Q 039449 7 LRCITVDVTGTLLAY 21 (253)
Q Consensus 7 ~k~i~fD~DGTL~~~ 21 (253)
+++|+||+||||++.
T Consensus 1 ikli~~DlDGTLl~~ 15 (239)
T 1u02_A 1 MSLIFLDYDGTLVPI 15 (239)
T ss_dssp -CEEEEECBTTTBCC
T ss_pred CeEEEEecCCCCcCC
Confidence 579999999999983
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=95.90 E-value=0.0026 Score=47.65 Aligned_cols=26 Identities=12% Similarity=0.060 Sum_probs=18.2
Q ss_pred EEEEecCCceeccCCCHHHHHHHHHHH
Q 039449 9 CITVDVTGTLLAYKGELGDYYCMAAKS 35 (253)
Q Consensus 9 ~i~fD~DGTL~~~~~~~~~~~~~~~~~ 35 (253)
+|+||+||||++..... .....++++
T Consensus 5 li~~DlDGTLl~~~~~~-~~~~~~l~~ 30 (244)
T 1s2o_A 5 LLISDLDNTWVGDQQAL-EHLQEYLGD 30 (244)
T ss_dssp EEEECTBTTTBSCHHHH-HHHHHHHHT
T ss_pred EEEEeCCCCCcCCHHHH-HHHHHHHHH
Confidence 99999999999976432 344445544
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=95.85 E-value=0.018 Score=45.57 Aligned_cols=86 Identities=10% Similarity=0.005 Sum_probs=60.3
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcch---hhhhhh-hcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCC
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRY---QDVILP-ALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIA 189 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~---~~~~l~-~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~ 189 (253)
.+.|++.++++.|++.|++++++||++... ....++ .+|+.. ..+.++++...-.. .+ . .
T Consensus 29 ~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~--~~~~i~ts~~~~~~---------~~---~--~ 92 (352)
T 3kc2_A 29 KPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDV--SPLQIIQSHTPYKS---------LV---N--K 92 (352)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCC--CGGGEECTTGGGGG---------GT---T--T
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCC--ChhhEeehHHHHHH---------HH---h--c
Confidence 567999999999999999999999997533 233444 688865 44555555543211 11 1 1
Q ss_pred CCceEEEcCCcccchhhhhhcCCeEEEE
Q 039449 190 PEEALHIGDSFRKDYVPAKSVGMHALLV 217 (253)
Q Consensus 190 ~~~~~~iGD~~~~Di~~a~~~G~~~i~~ 217 (253)
.+.+++||-.. ....++++|+..+..
T Consensus 93 ~~~v~viG~~~--l~~~l~~~G~~~v~~ 118 (352)
T 3kc2_A 93 YSRILAVGTPS--VRGVAEGYGFQDVVH 118 (352)
T ss_dssp CSEEEEESSTT--HHHHHHHHTCSEEEE
T ss_pred CCEEEEECCHH--HHHHHHhCCCeEecc
Confidence 25789998764 678899999998864
|
| >3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=95.76 E-value=0.011 Score=47.82 Aligned_cols=94 Identities=13% Similarity=0.049 Sum_probs=66.2
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeee-ccccCccCCCHHHHHHHHHH-hCCCCC
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVF-SGLEGVEKPDPRIYEIALER-AGNIAP 190 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~-~~~~~~~kp~~~~~~~~~~~-~~~~~~ 190 (253)
+...||+.++|+++. ++|.++|.|.+...++..+++.++... .+|...++ -+..+.. +.+=+++ ++ .+.
T Consensus 82 V~~RPgl~eFL~~ls-~~yEivIfTas~~~YA~~Vl~~LDp~~-~~f~~Rl~sRd~cg~~------~~KdL~~ll~-rdl 152 (442)
T 3ef1_A 82 IKFRPGLAQFLQKIS-ELYELHIYTMGTKAYAKEVAKIIDPTG-KLFQDRVLSRDDSGSL------AQKSLRRLFP-CDT 152 (442)
T ss_dssp EEECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHHHHHCTTS-TTTTTCEECTTTSSCS------SCCCGGGTCS-SCC
T ss_pred EEeCCCHHHHHHHHh-CCcEEEEEcCCCHHHHHHHHHHhccCC-ccccceEEEecCCCCc------eeeehHHhcC-CCc
Confidence 367899999999999 559999999999999999999987764 34555444 3333221 1112443 47 889
Q ss_pred CceEEEcCCcccchhhhhhcCCeEEEEcCC
Q 039449 191 EEALHIGDSFRKDYVPAKSVGMHALLVDRF 220 (253)
Q Consensus 191 ~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~ 220 (253)
+.+++|+|++ . .-... . ..|.+..|
T Consensus 153 ~~vvIIDd~p-~-~~~~~--p-N~I~I~~~ 177 (442)
T 3ef1_A 153 SMVVVIDDRG-D-VWDWN--P-NLIKVVPY 177 (442)
T ss_dssp TTEEEEESCS-G-GGTTC--T-TEEECCCC
T ss_pred ceEEEEECCH-H-HhCCC--C-CEEEcCCc
Confidence 9999999999 3 33333 4 77777744
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=95.53 E-value=0.0033 Score=47.11 Aligned_cols=33 Identities=18% Similarity=0.069 Sum_probs=26.4
Q ss_pred ccCceEEEEecCCceeccCCCHHHHHHHHHHHc
Q 039449 4 LSRLRCITVDVTGTLLAYKGELGDYYCMAAKSV 36 (253)
Q Consensus 4 ~~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~ 36 (253)
.|++|+|+||+||||++....+.+...++++++
T Consensus 3 ~~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l 35 (246)
T 2amy_A 3 APGPALCLFDVDGTLTAPRQKITKEMDDFLQKL 35 (246)
T ss_dssp -CCSEEEEEESBTTTBCTTSCCCHHHHHHHHHH
T ss_pred CCCceEEEEECCCCcCCCCcccCHHHHHHHHHH
Confidence 457899999999999998877767777776665
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=94.71 E-value=0.01 Score=45.34 Aligned_cols=50 Identities=16% Similarity=0.101 Sum_probs=37.1
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCC---cchhhhhhhhcCCC-CCcceeEeeec
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAE---YRYQDVILPALGVN-QGTEWDFGVFS 165 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~---~~~~~~~l~~~gl~-~~~~f~~~~~~ 165 (253)
.+.|++.+.|++++++|++++++||+. .......++.+|+. . .++.++.+
T Consensus 30 ~~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~~~--~~~~ii~~ 83 (284)
T 2hx1_A 30 GLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLFSI--TADKIISS 83 (284)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCTTC--CGGGEEEH
T ss_pred eeChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcCCC--CHhhEEcH
Confidence 456889999999999999999999843 34456677888887 5 44444443
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=93.36 E-value=0.2 Score=37.68 Aligned_cols=85 Identities=13% Similarity=0.273 Sum_probs=54.5
Q ss_pred cCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhh---hhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCC
Q 039449 115 VFPDSQPFLRWAREKGLIVGIISNAEYRYQDVIL---PALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPE 191 (253)
Q Consensus 115 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l---~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 191 (253)
+.|++.+.++.++++|++++++||+......... +.+|+.. ..+.++.+. ......+++.. ...
T Consensus 18 ~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~--~~~~i~~~~---------~~~~~~l~~~~--~~~ 84 (263)
T 1zjj_A 18 AIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDV--SSSIIITSG---------LATRLYMSKHL--DPG 84 (263)
T ss_dssp ECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCC--CGGGEEEHH---------HHHHHHHHHHS--CCC
T ss_pred eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCC--ChhhEEecH---------HHHHHHHHHhC--CCC
Confidence 3478899999999999999999999876544444 4467754 223333322 23333444443 236
Q ss_pred ceEEEcCCcccchhhhhhcCCeE
Q 039449 192 EALHIGDSFRKDYVPAKSVGMHA 214 (253)
Q Consensus 192 ~~~~iGD~~~~Di~~a~~~G~~~ 214 (253)
++.++|.. .....++..|+..
T Consensus 85 ~v~viG~~--~l~~~l~~~G~~~ 105 (263)
T 1zjj_A 85 KIFVIGGE--GLVKEMQALGWGI 105 (263)
T ss_dssp CEEEESCH--HHHHHHHHHTSCB
T ss_pred EEEEEcCH--HHHHHHHHcCCee
Confidence 78888874 3677777777753
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=91.13 E-value=0.11 Score=38.98 Aligned_cols=40 Identities=20% Similarity=0.217 Sum_probs=31.5
Q ss_pred CCChHHHHHHHHHcCCEEEEEeCCC---cchhhhhhhhcCCCC
Q 039449 116 FPDSQPFLRWAREKGLIVGIISNAE---YRYQDVILPALGVNQ 155 (253)
Q Consensus 116 ~~~~~~~l~~l~~~g~~~~i~s~~~---~~~~~~~l~~~gl~~ 155 (253)
.|++.+.|++++++|++++++||+. .......++.+|+..
T Consensus 26 ~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~ 68 (268)
T 3qgm_A 26 IPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEV 68 (268)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCC
T ss_pred CcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCC
Confidence 3577899999999999999999954 344556677788864
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=90.94 E-value=0.15 Score=38.05 Aligned_cols=31 Identities=23% Similarity=0.075 Sum_probs=24.3
Q ss_pred cCceEEEEecCCceeccCCCHHHHHHHHHHH
Q 039449 5 SRLRCITVDVTGTLLAYKGELGDYYCMAAKS 35 (253)
Q Consensus 5 ~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~ 35 (253)
|++|+|+||+||||+++...+.+....++++
T Consensus 2 M~~kli~~DlDGTLl~~~~~i~~~~~~~l~~ 32 (246)
T 3f9r_A 2 MKRVLLLFDVDGTLTPPRLCQTDEMRALIKR 32 (246)
T ss_dssp CCSEEEEECSBTTTBSTTSCCCHHHHHHHHH
T ss_pred CCceEEEEeCcCCcCCCCCccCHHHHHHHHH
Confidence 3589999999999999887666666665544
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.46 E-value=0.16 Score=36.46 Aligned_cols=17 Identities=24% Similarity=0.563 Sum_probs=15.1
Q ss_pred CceEEEEecCCceeccC
Q 039449 6 RLRCITVDVTGTLLAYK 22 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~ 22 (253)
+.+++++|+||||+++.
T Consensus 27 ~k~~LVLDLD~TLvhs~ 43 (195)
T 2hhl_A 27 GKKCVVIDLDETLVHSS 43 (195)
T ss_dssp TCCEEEECCBTTTEEEE
T ss_pred CCeEEEEccccceEccc
Confidence 46899999999999975
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=87.36 E-value=0.59 Score=35.36 Aligned_cols=38 Identities=21% Similarity=0.229 Sum_probs=33.8
Q ss_pred CChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCC
Q 039449 117 PDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVN 154 (253)
Q Consensus 117 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~ 154 (253)
+...+.|++|+++|++++++|+.+...+...++.+++.
T Consensus 29 ~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 66 (275)
T 1xvi_A 29 QPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 66 (275)
T ss_dssp CTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 45689999999999999999999998888888888875
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=87.34 E-value=0.28 Score=36.80 Aligned_cols=38 Identities=13% Similarity=0.239 Sum_probs=29.2
Q ss_pred ChHHHHHHHHHcCCEEEEEeCCCc---chhhhhhhhcCCCC
Q 039449 118 DSQPFLRWAREKGLIVGIISNAEY---RYQDVILPALGVNQ 155 (253)
Q Consensus 118 ~~~~~l~~l~~~g~~~~i~s~~~~---~~~~~~l~~~gl~~ 155 (253)
++.+.|++++++|++++++||++. ......++.+|+..
T Consensus 26 ~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~ 66 (266)
T 3pdw_A 26 EACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPA 66 (266)
T ss_dssp HHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCC
T ss_pred cHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 456889999999999999999544 33556677778764
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=87.32 E-value=0.71 Score=35.00 Aligned_cols=39 Identities=23% Similarity=0.276 Sum_probs=33.4
Q ss_pred CChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCC
Q 039449 117 PDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQ 155 (253)
Q Consensus 117 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~ 155 (253)
+...+.|++++++|++++++|+.+...+...++.+++..
T Consensus 25 ~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~~ 63 (282)
T 1rkq_A 25 PAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQ 63 (282)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCS
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 445688999999999999999999988888888888763
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=85.91 E-value=0.32 Score=36.46 Aligned_cols=39 Identities=23% Similarity=0.415 Sum_probs=30.7
Q ss_pred CChHHHHHHHHHcCCEEEEEeCCCcc---hhhhhhhhcCCCC
Q 039449 117 PDSQPFLRWAREKGLIVGIISNAEYR---YQDVILPALGVNQ 155 (253)
Q Consensus 117 ~~~~~~l~~l~~~g~~~~i~s~~~~~---~~~~~l~~~gl~~ 155 (253)
|++.+.|++++++|++++++||+... .....++.+|+..
T Consensus 24 ~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~ 65 (264)
T 3epr_A 24 PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVET 65 (264)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCC
T ss_pred cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 57789999999999999999976443 3556677778764
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=85.65 E-value=0.29 Score=34.63 Aligned_cols=17 Identities=18% Similarity=0.428 Sum_probs=15.0
Q ss_pred CceEEEEecCCceeccC
Q 039449 6 RLRCITVDVTGTLLAYK 22 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~ 22 (253)
+.+++++|+|+||+++.
T Consensus 14 ~k~~LVLDLD~TLvhs~ 30 (181)
T 2ght_A 14 DKICVVINLDETLVHSS 30 (181)
T ss_dssp TSCEEEECCBTTTEEEE
T ss_pred CCeEEEECCCCCeECCc
Confidence 46899999999999975
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=84.06 E-value=1.1 Score=34.33 Aligned_cols=41 Identities=17% Similarity=0.208 Sum_probs=32.0
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCc---chhhhhhhhcCCC
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEY---RYQDVILPALGVN 154 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~---~~~~~~l~~~gl~ 154 (253)
.+.|++.+.++.|+++|++++++||+.. ......++.+|+.
T Consensus 37 ~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 37 RAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 4567899999999999999999998543 3345566777776
|
| >2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A* | Back alignment and structure |
|---|
Probab=83.93 E-value=0.8 Score=38.24 Aligned_cols=21 Identities=29% Similarity=0.656 Sum_probs=18.2
Q ss_pred ccCceEEEEecCCceeccCCC
Q 039449 4 LSRLRCITVDVTGTLLAYKGE 24 (253)
Q Consensus 4 ~~~~k~i~fD~DGTL~~~~~~ 24 (253)
+.++++|.||+|+||......
T Consensus 62 L~~I~~iGFDmDyTLa~Y~~~ 82 (555)
T 2jc9_A 62 MEKIKCFGFDMDYTLAVYKSP 82 (555)
T ss_dssp GGGCCEEEECTBTTTBCBCTT
T ss_pred ccCCCEEEECCcccccccCcH
Confidence 567999999999999998753
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=83.66 E-value=1.2 Score=33.24 Aligned_cols=42 Identities=24% Similarity=0.268 Sum_probs=32.2
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCc---chhhhhhhhcCCCC
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEY---RYQDVILPALGVNQ 155 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~---~~~~~~l~~~gl~~ 155 (253)
.+.|++.+.+++++++|++++++||+.. ......++.+|+..
T Consensus 33 ~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~ 77 (271)
T 1vjr_A 33 SLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDV 77 (271)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCC
T ss_pred EECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 4568889999999999999999996643 34555667777753
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=83.02 E-value=1 Score=34.15 Aligned_cols=39 Identities=18% Similarity=0.275 Sum_probs=34.5
Q ss_pred CChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCC
Q 039449 117 PDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQ 155 (253)
Q Consensus 117 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~ 155 (253)
+...+.|++++++|++++++|+.+...+...++.+|+..
T Consensus 41 ~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~ 79 (285)
T 3pgv_A 41 PYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRS 79 (285)
T ss_dssp HHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSCC
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCCc
Confidence 456788999999999999999999999998999998875
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=82.46 E-value=0.93 Score=33.66 Aligned_cols=37 Identities=16% Similarity=0.195 Sum_probs=31.5
Q ss_pred hHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCC
Q 039449 119 SQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQ 155 (253)
Q Consensus 119 ~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~ 155 (253)
..+.|++++++|++++++|+.+...+...++.+++..
T Consensus 22 ~~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~~ 58 (249)
T 2zos_A 22 AKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET 58 (249)
T ss_dssp GHHHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCc
Confidence 4578888999999999999999888888888888763
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=82.26 E-value=1.1 Score=29.42 Aligned_cols=30 Identities=20% Similarity=0.052 Sum_probs=25.4
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcch
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRY 143 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~ 143 (253)
.+.+++.+.+++++++|++++++|+.....
T Consensus 24 ~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~~ 53 (126)
T 1xpj_A 24 LPRLDVIEQLREYHQLGFEIVISTARNMRT 53 (126)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECTTTTT
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEeCCChhh
Confidence 455778899999999999999999987643
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=82.20 E-value=0.74 Score=33.70 Aligned_cols=39 Identities=10% Similarity=0.241 Sum_probs=33.1
Q ss_pred CChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCC
Q 039449 117 PDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQ 155 (253)
Q Consensus 117 ~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~ 155 (253)
+...+.+++++++|++++++|+.........++.+|+..
T Consensus 23 ~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~ 61 (231)
T 1wr8_A 23 EKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSG 61 (231)
T ss_dssp HHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCC
Confidence 456788899999999999999999888888888888764
|
| >3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118} | Back alignment and structure |
|---|
Probab=82.08 E-value=0.57 Score=33.83 Aligned_cols=17 Identities=12% Similarity=0.188 Sum_probs=14.9
Q ss_pred CceEEEEecCCceeccC
Q 039449 6 RLRCITVDVTGTLLAYK 22 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~ 22 (253)
+.+++++|+|+||+++.
T Consensus 33 ~~~tLVLDLDeTLvh~~ 49 (204)
T 3qle_A 33 RPLTLVITLEDFLVHSE 49 (204)
T ss_dssp CSEEEEEECBTTTEEEE
T ss_pred CCeEEEEeccccEEeee
Confidence 45899999999999975
|
| >2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824} | Back alignment and structure |
|---|
Probab=81.55 E-value=4.6 Score=28.80 Aligned_cols=84 Identities=14% Similarity=0.112 Sum_probs=51.5
Q ss_pred hHHHHHHHHHcCCEEEEEeCCCcch-hhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEc
Q 039449 119 SQPFLRWAREKGLIVGIISNAEYRY-QDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIG 197 (253)
Q Consensus 119 ~~~~l~~l~~~g~~~~i~s~~~~~~-~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iG 197 (253)
+...|..+++.+-++++++..+... .+.+.+.+|++- ....+.+.... .+.+++ ++.-| ++ ++||
T Consensus 83 il~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~~~i----~~~~~~~~~e~----~~~i~~-l~~~G-~~----vvVG 148 (196)
T 2q5c_A 83 TMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLGVKI----KEFLFSSEDEI----TTLISK-VKTEN-IK----IVVS 148 (196)
T ss_dssp HHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHTCEE----EEEEECSGGGH----HHHHHH-HHHTT-CC----EEEE
T ss_pred HHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhCCce----EEEEeCCHHHH----HHHHHH-HHHCC-Ce----EEEC
Confidence 4455556666677999998765543 455556666653 22222222211 123322 33445 54 7999
Q ss_pred CCcccchhhhhhcCCeEEEEc
Q 039449 198 DSFRKDYVPAKSVGMHALLVD 218 (253)
Q Consensus 198 D~~~~Di~~a~~~G~~~i~~~ 218 (253)
|.. -...|++.|++++++.
T Consensus 149 ~~~--~~~~A~~~Gl~~vli~ 167 (196)
T 2q5c_A 149 GKT--VTDEAIKQGLYGETIN 167 (196)
T ss_dssp CHH--HHHHHHHTTCEEEECC
T ss_pred CHH--HHHHHHHcCCcEEEEe
Confidence 998 4889999999999987
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=80.33 E-value=2.2 Score=34.21 Aligned_cols=97 Identities=11% Similarity=0.171 Sum_probs=53.6
Q ss_pred hHHHHHHHHHc-CCEEE-EEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEE
Q 039449 119 SQPFLRWAREK-GLIVG-IISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHI 196 (253)
Q Consensus 119 ~~~~l~~l~~~-g~~~~-i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~i 196 (253)
..+++++|++. ++.+. ++|+.........++.+|+.. .++--+........+.-...+..+.+.+...+|+=++.+
T Consensus 41 ~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~~~i~~--~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~ 118 (396)
T 3dzc_A 41 MAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLELFSITP--DFDLNIMEPGQTLNGVTSKILLGMQQVLSSEQPDVVLVH 118 (396)
T ss_dssp HHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHHTTCCC--SEECCCCCTTCCHHHHHHHHHHHHHHHHHHHCCSEEEEE
T ss_pred HHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhcCCCC--ceeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 34778888886 67774 566655444566677888854 121111011101101112222222222221457888889
Q ss_pred cCCcccc---hhhhhhcCCeEEEEc
Q 039449 197 GDSFRKD---YVPAKSVGMHALLVD 218 (253)
Q Consensus 197 GD~~~~D---i~~a~~~G~~~i~~~ 218 (253)
||.. .- ..+|+..|++.+++.
T Consensus 119 g~~~-~~~~~~~aa~~~~IPv~h~~ 142 (396)
T 3dzc_A 119 GDTA-TTFAASLAAYYQQIPVGHVE 142 (396)
T ss_dssp TTSH-HHHHHHHHHHTTTCCEEEET
T ss_pred CCch-hHHHHHHHHHHhCCCEEEEE
Confidence 9876 43 357788999999886
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 253 | ||||
| d1zs9a1 | 253 | c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapien | 2e-11 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 2e-09 | |
| d2b0ca1 | 197 | c.108.1.2 (A:8-204) Putative phosphatase YihX {Esc | 3e-08 | |
| d2gfha1 | 247 | c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatas | 4e-08 | |
| d1x42a1 | 230 | c.108.1.1 (A:1-230) Hypothetical protein PH0459 {A | 1e-07 | |
| d1qq5a_ | 245 | c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xan | 1e-06 | |
| d2fi1a1 | 187 | c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Str | 6e-06 | |
| d2g80a1 | 225 | c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast | 8e-05 | |
| d1vjra_ | 261 | c.108.1.14 (A:) Hypothetical protein TM1742 {Therm | 3e-04 | |
| d1zrna_ | 220 | c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pse | 0.002 | |
| d1o08a_ | 221 | c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcu | 0.002 |
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Score = 60.2 bits (144), Expect = 2e-11
Identities = 34/252 (13%), Positives = 79/252 (31%), Gaps = 16/252 (6%)
Query: 1 MALLSRLRCITVDVTGTLL-----------AYKGELGDYYCMAAKSVGLPCPDYKRVHEG 49
+++ + + I +D+ GT + + +Y + +
Sbjct: 1 LSVPAEVTVILLDIEGTTTPIAFVKDILFPYIEENVKEYLQTHWEEEECQQDVSLLRKQA 60
Query: 50 FKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGS 109
+ A+ + A P + V + + D +++ ++ + +
Sbjct: 61 EEDAHLDGAVPIPAASGNGVDDLQQMIQAVVDNVCWQMSLDRKTTALKQLQGHMWRAAFT 120
Query: 110 SAPYT--VFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGL 167
+ F D P +R RE G+ V I S+ Q ++ E G F
Sbjct: 121 AGRMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDT- 179
Query: 168 EGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKE 227
+ K + Y + G + L + D ++ A+ +H +V R +
Sbjct: 180 KIGHKVESESYRKIADSIG-CSTNNILFLTDV-TREASAAEEADVHVAVVVRPGNAGLTD 237
Query: 228 WRKSGAIVLPDL 239
K+ ++
Sbjct: 238 DEKTYYSLITSF 249
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 55.2 bits (132), Expect = 2e-09
Identities = 44/259 (16%), Positives = 73/259 (28%), Gaps = 51/259 (19%)
Query: 16 GTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMA-KNYPCFGFAAKMPNIV 74
+ K + A + L D K A +A + Y + +K+ V
Sbjct: 138 DNVKVGKNNIYAALEEFATTE-LHVSDATL--FSLKGALWTLAQEVYQEWYLGSKLYEDV 194
Query: 75 WWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVG 134
K + GY Y E + + L + G +G
Sbjct: 195 EKKIARTT--FKTGYIYQEI-----------------ILRPVDEVKVLLNDLKGAGFELG 235
Query: 135 IISNAEYRYQDVILPALGVNQGTEWDFGV-----------FSGLEGVEKPDPRIYEIALE 183
I + Y V LG+ E DF + + KP+P Y AL
Sbjct: 236 IATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALY 295
Query: 184 RAG-------------NIAPEEALHIGDSFRKDYVPAKSVGMHALLV--DRFKTPDAKEW 228
+ ++ +GDS D + A+ +G + A E
Sbjct: 296 GNNRDKYESYINKQDNIVNKDDVFIVGDSLA-DLLSAQKIGATFIGTLTGLKGKDAAGEL 354
Query: 229 RKSGA-IVLPDLVAVKEFL 246
A V+ L ++ L
Sbjct: 355 EAHHADYVINHLGELRGVL 373
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} Length = 197 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Score = 50.1 bits (118), Expect = 3e-08
Identities = 26/159 (16%), Positives = 53/159 (33%), Gaps = 11/159 (6%)
Query: 65 GFAAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLR 124
F + + + F ++ ++ + P+ +
Sbjct: 43 AFHQHERGEISDEAFAEALCHEMALPLSYEQFSHGWQAVFVAL--------RPEVIAIMH 94
Query: 125 WAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALER 184
RE+G V ++SN + D S G+ KP+ RIY+ L+
Sbjct: 95 KLREQGHRVVVLSNTNRLHTTFWPEEYP-EIRDAADHIYLSQDLGMRKPEARIYQHVLQA 153
Query: 185 AGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTP 223
G +P + + D+ + A +G+ ++LV T
Sbjct: 154 EGF-SPSDTVFFDDNAD-NIEGANQLGITSILVKDKTTI 190
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} Length = 247 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Score = 50.2 bits (118), Expect = 4e-08
Identities = 29/252 (11%), Positives = 79/252 (31%), Gaps = 13/252 (5%)
Query: 4 LSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKN-YP 62
LSR+R + D+ TL+ G K + + +++K +
Sbjct: 3 LSRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFH 62
Query: 63 CFGFAAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPF 122
+ W+ ++++ A + +++ + D +
Sbjct: 63 PYSTCITDVRTSHWEEAIQETKGGADNRKLAEECYFLWKSTRL-----QHMILADDVKAM 117
Query: 123 LRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIAL 182
L R++ ++ + + ++ I + G E L
Sbjct: 118 LTELRKEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLL 177
Query: 183 ERAGNIAPEEALHIGDSFRKDYVPAKSVGMHA-LLVDRFKTPDAKEWRKSGAIV--LPDL 239
+ P + + +GD+ D + G+ A + +++ +V + +L
Sbjct: 178 ----GVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLEL 233
Query: 240 VAVKEFLTSEIS 251
A+ + + ++S
Sbjct: 234 PALLQSIDCKVS 245
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 48.7 bits (114), Expect = 1e-07
Identities = 43/240 (17%), Positives = 95/240 (39%), Gaps = 15/240 (6%)
Query: 7 LRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGF 66
+R + D GTLL+ +GE + + + +G + K + + ++ +E NY +
Sbjct: 2 IRAVFFDFVGTLLSVEGEAKTHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPY 61
Query: 67 AAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWA 126
P + +R + G+ Y E+ F +I R++ +G ++P+ L+
Sbjct: 62 ---RPIRDIEEEVMRKLAEKYGFKYPEN-FWEIHLRMHQRYG-----ELYPEVVEVLKSL 112
Query: 127 REKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAG 186
+ K + I + + + + +
Sbjct: 113 KGKYHVGMITDSDTEYLMAHLDALGIKDLFDSITTSEEA----GFFKPHPRIFELALKKA 168
Query: 187 NIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKEFL 246
+ EEA+++GD+ KD +K++GM ++L+DR +E+ ++ DL V + +
Sbjct: 169 GVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEK--REFWDKCDFIVSDLREVIKIV 226
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} Length = 245 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Score = 45.9 bits (107), Expect = 1e-06
Identities = 37/228 (16%), Positives = 58/228 (25%), Gaps = 22/228 (9%)
Query: 8 RCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFA 67
+ + D GTL + + D A G R + + + Y F
Sbjct: 3 KAVVFDAYGTLFDVQS-VADATERAYPGRGEYITQVWRQKQLEYSWLRALMGRYADFWSV 61
Query: 68 AKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAR 127
+ + E + ++ PY L +
Sbjct: 62 TREALAYTLG------------TLGLEPDESFLADMAQAYNRLTPYPDAAQCLAELAPLK 109
Query: 128 EKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGN 187
L G + + L + VF KP P Y + E G
Sbjct: 110 RAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVF-------KPHPDSYALVEEVLG- 161
Query: 188 IAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIV 235
+ P E L + + D AK+ G V R SG I
Sbjct: 162 VTPAEVLFVSSNGF-DVGGAKNFGFSVARVARLSQEALARELVSGTIA 208
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} Length = 187 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 43.6 bits (101), Expect = 6e-06
Identities = 23/177 (12%), Positives = 42/177 (23%), Gaps = 13/177 (7%)
Query: 48 EGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASF 107
E A+ E Y G ++ + E+ EK
Sbjct: 19 ETSTAAFVETLALY---GITQDHDSVYQALKVSTPFAIETFAPNLENFLEKYKENEAREL 75
Query: 108 GSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGL 167
+ D + + +V ++ + + + V S
Sbjct: 76 EHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVLEILEKT------SIAAYFTEVVTSSS 129
Query: 168 EGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPD 224
KP+P E+ L IGD D ++ G+ L
Sbjct: 130 GFKRKPNPESMLYLREKYQ---ISSGLVIGDRPI-DIEAGQAAGLDTHLFTSIVNLR 182
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 40.2 bits (92), Expect = 8e-05
Identities = 28/226 (12%), Positives = 55/226 (24%), Gaps = 19/226 (8%)
Query: 13 DVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPN 72
D+ GT+ + V P + + + +
Sbjct: 9 DIEGTVCPISFVKETLFPYFTNKV----PQLVQQD-TRDSPVSNILSQFHIDNKEQLQAH 63
Query: 73 IVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLI 132
I+ +D + + V+ D+ F++ + +
Sbjct: 64 ILEL--VAKDVKDPILKQLQGYVWAHGYESGQI------KAPVYADAIDFIKRKKRVFIY 115
Query: 133 VGIISN----AEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNI 188
QD PA + G F +K + + Y L
Sbjct: 116 SSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGKKTETQSYANILRD-IGA 174
Query: 189 APEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAI 234
E L + D+ + A VG+ L R + +K
Sbjct: 175 KASEVLFLSDNPL-ELDAAAGVGIATGLASRPGNAPVPDGQKYQVY 219
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} Length = 261 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Score = 38.9 bits (89), Expect = 3e-04
Identities = 33/252 (13%), Positives = 65/252 (25%), Gaps = 17/252 (6%)
Query: 3 LLSRLRCITVDVTGTL-------------LAYKGELGDYYCMAAKSVGLPCPDYKRVHEG 49
+L ++ +D+ GT L E + + L DY R
Sbjct: 3 VLDKIELFILDMDGTFYLDDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRN 62
Query: 50 FKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGS 109
+ + A A M + ++
Sbjct: 63 MGVDVPDDAVVTSGEITAEHMLKRFGRCRIFLLGTPQLKKVFEAYGHVIDEENPDFVVLG 122
Query: 110 SAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEG 169
+ + R+ + + ++ +P G
Sbjct: 123 FDKTLTYERLKKACILLRKGKFYIATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLI 182
Query: 170 VEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWR 229
KP+P + ++ E+ + E +GD D K+ G+ ++LV T +
Sbjct: 183 AGKPNPLVVDVISEK-FGVPKERMAMVGDRLYTDVKLGKNAGIVSILV---LTGETTPED 238
Query: 230 KSGAIVLPDLVA 241
A PD V
Sbjct: 239 LERAETKPDFVF 250
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} Length = 220 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Score = 36.4 bits (82), Expect = 0.002
Identities = 26/206 (12%), Positives = 58/206 (28%), Gaps = 11/206 (5%)
Query: 41 PDYKRVHEGFKLAYKEMAK--NYPCFGFAAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEK 98
R E F +E++ + + + + + + +
Sbjct: 18 SVVGRCDEAFPGRGREISALWRQKQLEYTWLRSLMNRYVNFQQATEDALRFTCRHLGLDL 77
Query: 99 IFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTE 158
R + F + LR + +GL + I+SN + D ++ G+ G +
Sbjct: 78 DARTRSTLCDAYLRLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFD 137
Query: 159 WDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVD 218
V E+A + L + + D A+ G ++
Sbjct: 138 HLLSVD---PVQVYKPDNRVYELAEQALGLDRSAILFVASNAW-DATGARYFGFPTCWIN 193
Query: 219 RFKTPDAKEWRKSGAIV-----LPDL 239
R + + V + +L
Sbjct: 194 RTGNVFEEMGQTPDWEVTSLRAVVEL 219
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} Length = 221 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Score = 36.4 bits (82), Expect = 0.002
Identities = 26/233 (11%), Positives = 61/233 (26%), Gaps = 30/233 (12%)
Query: 7 LRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGF 66
+ + D+ G + + A+ +G+ D + + ++ ++ +
Sbjct: 2 FKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLAD 61
Query: 67 AAKMPNIVWWKTCVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWA 126
++ V+P L+
Sbjct: 62 KKVSAEEFKELAKRKNDNYVKMIQDVSPAD------------------VYPGILQLLKDL 103
Query: 127 REKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAG 186
R + + + S + +L + + + PD I A
Sbjct: 104 RSNKIKIALASA--SKNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAA---HAV 158
Query: 187 NIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDL 239
+AP E++ + DS K G + V R + ++PD
Sbjct: 159 GVAPSESIGLEDSQA-GIQAIKDSGALPIGVGRPEDLGDDIV------IVPDT 204
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 253 | |||
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 100.0 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 100.0 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 100.0 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 100.0 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 100.0 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 100.0 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 99.98 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 99.97 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 99.97 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 99.97 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 99.97 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 99.97 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 99.97 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 99.96 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 99.96 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 99.93 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 99.93 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 99.91 | |
| d2g80a1 | 225 | Protein UTR4 {Baker's yeast (Saccharomyces cerevis | 99.9 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 99.9 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 99.89 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 99.86 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.86 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 99.86 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.86 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 99.85 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 99.84 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 99.83 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.8 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 99.8 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.72 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 99.7 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.7 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.56 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.51 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.45 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.42 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.38 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 99.34 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.3 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 99.29 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 99.26 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.25 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.19 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.19 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.02 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 98.93 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.93 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 98.82 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.79 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.68 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 98.5 | |
| d2bdea1 | 458 | Cytosolic IMP-GMP specific 5'-nucleotidase {Legion | 98.4 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.32 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 97.73 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 97.39 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 97.33 | |
| d1ta0a_ | 181 | Carboxy-terminal domain RNA polymerase II polypept | 97.02 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 96.86 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 95.13 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 94.84 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 91.08 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 89.47 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 88.22 | |
| d1ta0a_ | 181 | Carboxy-terminal domain RNA polymerase II polypept | 85.04 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 84.74 | |
| d1oi7a2 | 167 | Succinyl-CoA synthetase, alpha-chain, C-terminal d | 84.37 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 84.16 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 83.51 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 81.82 |
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=100.00 E-value=5.9e-34 Score=212.77 Aligned_cols=220 Identities=20% Similarity=0.235 Sum_probs=166.1
Q ss_pred ccCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHH
Q 039449 4 LSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDS 83 (253)
Q Consensus 4 ~~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (253)
|.++|+|+||+||||+|+.+.+..++.++++++|.+....+.+... .+. .........+...
T Consensus 1 M~~~k~iiFD~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~--------------~~~----~~~~~~~~~~~~~ 62 (224)
T d2hsza1 1 MTQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMTW--------------IGN----GADVLSQRAVDWA 62 (224)
T ss_dssp CSSCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCCHHHHHHH--------------CSS----CHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCcccCHHHHHHHHHHHHHHCCCCCCcHHHHHHH--------------hhh----hhhhhhhhhhhhh
Confidence 4579999999999999999888899999999999887665544321 111 1112222222223
Q ss_pred HHHcCCCCChHHHHHH---HHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCccee
Q 039449 84 FVRAGYDYDEDTFEKI---FRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWD 160 (253)
Q Consensus 84 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~ 160 (253)
................ ...+..... .....++|++.++|+.|++.|++++++||+....++.+++.+|+.. +|+
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~--~f~ 139 (224)
T d2hsza1 63 CKQAEKELTEDEFKYFKRQFGFYYGENL-CNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDH--LFS 139 (224)
T ss_dssp HHHHTCCCCHHHHHHHHHHHHHHHHHHT-TSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG--GCS
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHhh-ccccchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchh--hcc
Confidence 3333333333322222 111222222 2345889999999999999999999999999999999999999998 999
Q ss_pred EeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhh-cCCcccCCH
Q 039449 161 FGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRK-SGAIVLPDL 239 (253)
Q Consensus 161 ~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~-~~~~~i~~l 239 (253)
.++.+...+..||+|+.+..++++++ ++++++++|||+. +|+.+|+++|+.+|++.+ +......+.. .++++++|+
T Consensus 140 ~~~~~~~~~~~kp~p~~~~~~~~~~~-~~~~~~~~igD~~-~Di~~A~~aG~~~i~v~~-g~~~~~~l~~~~~d~~v~~l 216 (224)
T d2hsza1 140 EMLGGQSLPEIKPHPAPFYYLCGKFG-LYPKQILFVGDSQ-NDIFAAHSAGCAVVGLTY-GYNYNIPIAQSKPDWIFDDF 216 (224)
T ss_dssp EEECTTTSSSCTTSSHHHHHHHHHHT-CCGGGEEEEESSH-HHHHHHHHHTCEEEEESS-SCSTTCCGGGGCCSEEESSG
T ss_pred ccccccccccccccchhhHHHHHHhh-hhhhccchhcCcH-HHHHHHHHcCCeEEEEeC-CCCCcchhhhcCCCEEECCH
Confidence 99999999999999999999999999 9999999999999 899999999999999994 3333333333 356899999
Q ss_pred HHHHHHHh
Q 039449 240 VAVKEFLT 247 (253)
Q Consensus 240 ~el~~~l~ 247 (253)
.||.++|+
T Consensus 217 ~dL~~iie 224 (224)
T d2hsza1 217 ADILKITQ 224 (224)
T ss_dssp GGGGGGTC
T ss_pred HHHHHhhC
Confidence 99988763
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=100.00 E-value=2.6e-33 Score=210.20 Aligned_cols=229 Identities=27% Similarity=0.397 Sum_probs=171.2
Q ss_pred CceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHH
Q 039449 6 RLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFV 85 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (253)
|+|+|+||+||||+++..........+.+.++......+.....+....+...... .+. ............++....
T Consensus 1 MiK~I~FD~dGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~ 77 (230)
T d1x42a1 1 MIRAVFFDFVGTLLSVEGEAKTHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNY--AGK-PYRPIRDIEEEVMRKLAE 77 (230)
T ss_dssp CCCEEEECSBTTTBCHHHHHHHHHHHHHHHHTTCSSCHHHHHHHHHHHHHHHHHHH--TTS-BCCCHHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCCCcEechhhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHh--ccc-ccchHHHHHHHHHHHHHH
Confidence 47999999999999977665555555555555444455555554444433322211 111 112344555566677777
Q ss_pred HcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeec
Q 039449 86 RAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFS 165 (253)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~ 165 (253)
..+...... ..+.+....... ..++||+.++|+.|+ +|++++++||++...+...++.+|+.. +|+.++++
T Consensus 78 ~~~~~~~~~-~~~~~~~~~~~~-----~~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~--~fd~i~~s 148 (230)
T d1x42a1 78 KYGFKYPEN-FWEIHLRMHQRY-----GELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKD--LFDSITTS 148 (230)
T ss_dssp HHCCCCCTT-HHHHHHHHHHHH-----CCBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGG--GCSEEEEH
T ss_pred HhhhchHHH-HHHHHHHHHHhh-----CcccccHHHHHHHhh-ccCceeeeeccccccchhhhccccccc--cccccccc
Confidence 777664433 333444444333 378899999999997 479999999999999999999999998 99999999
Q ss_pred cccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHHHHH
Q 039449 166 GLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKEF 245 (253)
Q Consensus 166 ~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~~~ 245 (253)
++.+..||+|+.|+.+++++| ++|++|++|||+..+|+.+|+++|++++++++.+.. ......++++++|++||.++
T Consensus 149 ~~~~~~KP~~~~~~~~~~~l~-~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~--~~~~~~~d~~i~~l~el~~~ 225 (230)
T d1x42a1 149 EEAGFFKPHPRIFELALKKAG-VKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEK--REFWDKCDFIVSDLREVIKI 225 (230)
T ss_dssp HHHTBCTTSHHHHHHHHHHHT-CCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCC--GGGGGGSSEEESSTTHHHHH
T ss_pred ccccccchhhHHHHHHHhhhc-ccccccceeecCcHhHHHHHHHcCCEEEEECCCCCC--cccccCCCEEECCHHHHHHH
Confidence 999999999999999999999 999999999999658999999999999999854433 23344567899999999999
Q ss_pred Hhhh
Q 039449 246 LTSE 249 (253)
Q Consensus 246 l~~~ 249 (253)
|+++
T Consensus 226 l~~l 229 (230)
T d1x42a1 226 VDEL 229 (230)
T ss_dssp HHHH
T ss_pred HHHc
Confidence 9874
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=100.00 E-value=4.7e-34 Score=210.86 Aligned_cols=205 Identities=18% Similarity=0.245 Sum_probs=158.9
Q ss_pred cCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHH
Q 039449 5 SRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSF 84 (253)
Q Consensus 5 ~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (253)
|++|+|+||+||||+|+.+.+.+++..+++++|.+... .+.... ++.. ....+
T Consensus 1 M~~k~viFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~-~~~~~~--------------~~~~------------~~~~~ 53 (207)
T d2hdoa1 1 MTYQALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSP-AQAQKT--------------FPMA------------AEQAM 53 (207)
T ss_dssp CCCSEEEECSBTTTEECHHHHHHHHHHHHHTTTCCCCH-HHHHHH--------------TTSC------------HHHHH
T ss_pred CCCcEEEEeCCCCcCcCHHHHHHHHHHHHHHcCCCCCH-HHHHHH--------------hcch------------hhhhh
Confidence 45899999999999999888889999999999987543 222211 1111 22233
Q ss_pred HHcCCCC-ChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEee
Q 039449 85 VRAGYDY-DEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGV 163 (253)
Q Consensus 85 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~ 163 (253)
...+... ..+.+...+...+.... ...+++||+.++|++|++ +++++++||+....++..++.+|+.. +|+.++
T Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~--~f~~i~ 128 (207)
T d2hdoa1 54 TELGIAASEFDHFQAQYEDVMASHY--DQIELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMM--RMAVTI 128 (207)
T ss_dssp HHTTCCGGGHHHHHHHHHHHHTTCG--GGCEECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGG--GEEEEE
T ss_pred hccccchhhHHHHHHHhhhhhcccc--cccccccchhhhhhhhcc-cccccccccccccccccccccccccc--cccccc
Confidence 3443321 22344444444444332 235789999999999985 69999999999999999999999998 999999
Q ss_pred eccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHHH
Q 039449 164 FSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVK 243 (253)
Q Consensus 164 ~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~ 243 (253)
++++.+..||+|++++.++++++ ++|++|++|||+. +|+.+|+++|+.+|++. ++..+.... ...+++++++.||.
T Consensus 129 ~~~~~~~~KP~p~~~~~~~~~~~-~~~~~~l~VgDs~-~Di~~a~~aG~~~i~v~-~g~~~~~~~-~~~~~~i~~l~dll 204 (207)
T d2hdoa1 129 SADDTPKRKPDPLPLLTALEKVN-VAPQNALFIGDSV-SDEQTAQAANVDFGLAV-WGMDPNADH-QKVAHRFQKPLDIL 204 (207)
T ss_dssp CGGGSSCCTTSSHHHHHHHHHTT-CCGGGEEEEESSH-HHHHHHHHHTCEEEEEG-GGCCTTGGG-SCCSEEESSGGGGG
T ss_pred cccccccchhhhhhhccccccee-eeccceeEecCCH-HHHHHHHHcCCeEEEEe-cCCCChhHh-hhcCcEeCCHHHHH
Confidence 99999999999999999999999 9999999999999 89999999999999998 344444443 33568899999886
Q ss_pred HH
Q 039449 244 EF 245 (253)
Q Consensus 244 ~~ 245 (253)
++
T Consensus 205 ~l 206 (207)
T d2hdoa1 205 EL 206 (207)
T ss_dssp GG
T ss_pred hh
Confidence 53
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.9e-33 Score=212.10 Aligned_cols=237 Identities=15% Similarity=0.131 Sum_probs=163.3
Q ss_pred ccCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHH
Q 039449 4 LSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDS 83 (253)
Q Consensus 4 ~~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (253)
|.++|+|+||+||||+++......++..+++.++....................... ..........+.....+...
T Consensus 3 m~~IKaviFD~dGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 79 (247)
T d2gfha1 3 LSRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKE---CFHPYSTCITDVRTSHWEEA 79 (247)
T ss_dssp CCCCCEEEECCBTTTBCHHHHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHHHTC---CCC----CHHHHHHHHHHHH
T ss_pred CCCCcEEEEcCCCCcCcChHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhhh---hhhhhhhhhhHHHHHHHHHH
Confidence 467999999999999998877777777777766443322111111111111111111 11112223334444444555
Q ss_pred HHHcCCCCChHHHH-HHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEe
Q 039449 84 FVRAGYDYDEDTFE-KIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFG 162 (253)
Q Consensus 84 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~ 162 (253)
+...+...+...+. ..+..+..... ....++|++.++|+.|+ +|++++++||++...+...++..|+.. +|+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~L~~L~-~~~~l~i~Tn~~~~~~~~~l~~~gl~~--~fd~i 154 (247)
T d2gfha1 80 IQETKGGADNRKLAEECYFLWKSTRL--QHMILADDVKAMLTELR-KEVRLLLLTNGDRQTQREKIEACACQS--YFDAI 154 (247)
T ss_dssp HHHHHCSSCCHHHHHHHHHHHHHHHH--HTCCCCHHHHHHHHHHH-TTSEEEEEECSCHHHHHHHHHHHTCGG--GCSEE
T ss_pred HHHhccccchHHHHHHHHHHHHHhhh--ccCccCccHHHHHHHhh-cccceEEeecccchhhhhhhhhccccc--ccccc
Confidence 55444443433332 23322222221 12478899999999998 579999999999999999999999988 99999
Q ss_pred eeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEE-EEcCCCCCChhhhhhcCCcccCCHHH
Q 039449 163 VFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHAL-LVDRFKTPDAKEWRKSGAIVLPDLVA 241 (253)
Q Consensus 163 ~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i-~~~~~~~~~~~~~~~~~~~~i~~l~e 241 (253)
+++++.+..||+|++|+.++++++ +++++|+||||++.+|+.+|+++|++++ ++++.+... ......+++++.++.|
T Consensus 155 ~~s~~~~~~KP~p~~~~~~~~~~~-~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~-~~~~~~p~~~i~~l~e 232 (247)
T d2gfha1 155 VIGGEQKEEKPAPSIFYHCCDLLG-VQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVP-LTSSPMPHYMVSSVLE 232 (247)
T ss_dssp EEGGGSSSCTTCHHHHHHHHHHHT-CCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCC-SSCCCCCSEEESSGGG
T ss_pred ccccccccchhhhhhHHHHHHHhh-cCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCc-ccccCCCCEEECCHHH
Confidence 999999999999999999999999 9999999999997679999999999865 555433322 2223346689999999
Q ss_pred HHHHHhhhh
Q 039449 242 VKEFLTSEI 250 (253)
Q Consensus 242 l~~~l~~~~ 250 (253)
|.++|++.-
T Consensus 233 L~~ll~~i~ 241 (247)
T d2gfha1 233 LPALLQSID 241 (247)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 999998754
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=6.4e-33 Score=206.33 Aligned_cols=210 Identities=15% Similarity=0.207 Sum_probs=154.2
Q ss_pred cCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHH
Q 039449 5 SRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSF 84 (253)
Q Consensus 5 ~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (253)
+++|+++||+||||+|+.+.+.+++..+++++|++......+ ....+. ..... +....
T Consensus 1 ~~i~a~iFD~DGTL~dt~~~~~~a~~~~~~~~g~~~~~~~~~--------------~~~~~~----~~~~~----~~~~~ 58 (218)
T d1te2a_ 1 RQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNEL--------------PDTLGL----RIDMV----VDLWY 58 (218)
T ss_dssp CCCCEEEECCBTTTBCCHHHHHHHHHHHHHHTTCCGGGGGGS--------------CCCTTC----CHHHH----HHHHH
T ss_pred CcceEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHH--------------HHHhCC----Cccch----hhhhh
Confidence 468999999999999988888889999999999864332211 111111 21211 12122
Q ss_pred HHcCC-CCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEee
Q 039449 85 VRAGY-DYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGV 163 (253)
Q Consensus 85 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~ 163 (253)
..... ....+.+.......+..... ....++||+.++|+.|+++|++++++||++...++..++.+|+.. +|+.++
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~--~F~~i~ 135 (218)
T d1te2a_ 59 ARQPWNGPSRQEVVERVIARAISLVE-ETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRD--SFDALA 135 (218)
T ss_dssp HHSCCSSSCHHHHHHHHHHHHHHHHH-HHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG--GCSEEE
T ss_pred hcccccchhHHHHHHHHHHHHHHhhh-ccccccchHHHHHHHhhhccccccccccccccccccccccccccc--cccccc
Confidence 22222 11222222222222211110 112578999999999999999999999999999999999999988 999999
Q ss_pred eccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHH
Q 039449 164 FSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAV 242 (253)
Q Consensus 164 ~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el 242 (253)
++++.+..||+|+.|..++++++ ++++++++|||+. +|+.+|+++|+++|++++.... .......++++++|+.||
T Consensus 136 ~~~~~~~~Kp~~~~~~~~~~~l~-~~~~~~l~igD~~-~di~aA~~~G~~~i~v~~~~~~-~~~~~~~a~~~i~~l~el 211 (218)
T d1te2a_ 136 SAEKLPYSKPHPQVYLDCAAKLG-VDPLTCVALEDSV-NGMIASKAARMRSIVVPAPEAQ-NDPRFVLANVKLSSLTEL 211 (218)
T ss_dssp ECTTSSCCTTSTHHHHHHHHHHT-SCGGGEEEEESSH-HHHHHHHHTTCEEEECCCTTTT-TCGGGGGSSEECSCGGGC
T ss_pred cccccccchhhHHHHHHHHHHcC-CCchhcEEEeeCH-HHHHHHHHcCCEEEEECCCCCc-cchhhcCCCEEECChhhC
Confidence 99999999999999999999999 9999999999999 8999999999999999843322 222234467899999997
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=100.00 E-value=2.6e-32 Score=201.84 Aligned_cols=209 Identities=19% Similarity=0.268 Sum_probs=158.2
Q ss_pred ccCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHH
Q 039449 4 LSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDS 83 (253)
Q Consensus 4 ~~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (253)
|.++|+|+||+||||+|+...+..++.++++++|.+....+.+.. ..+.. ....
T Consensus 1 M~~ik~VifD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~--------------~~~~~------------~~~~ 54 (210)
T d2ah5a1 1 MTSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRG--------------FMGPP------------LESS 54 (210)
T ss_dssp CTTCCEEEECSBTTTEECHHHHHHHHHHHHHHHTCCCCCHHHHHH--------------TSSSC------------HHHH
T ss_pred CCCCCEEEEeCCCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHH--------------hhhcc------------hhhh
Confidence 446899999999999999888889999999999988776554432 12221 1111
Q ss_pred HHHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEee
Q 039449 84 FVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGV 163 (253)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~ 163 (253)
+.+..-..........+...+.... .....+++++.++++.++.. ++++++||++...++..++.+|+.. +|+.++
T Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~gl~~--~fd~v~ 130 (210)
T d2ah5a1 55 FATCLSKDQISEAVQIYRSYYKAKG-IYEAQLFPQIIDLLEELSSS-YPLYITTTKDTSTAQDMAKNLEIHH--FFDGIY 130 (210)
T ss_dssp HHTTSCGGGHHHHHHHHHHHHHHTG-GGSCEECTTHHHHHHHHHTT-SCEEEEEEEEHHHHHHHHHHTTCGG--GCSEEE
T ss_pred ccccccchhhHHHHHHHHHHHHhhh-hhcccchhHHHHHHhhhhcc-cchhhcccccchhhhHHHHhhcccc--cccccc
Confidence 2211111112222233333332222 12357899999999999977 5899999999999999999999998 999988
Q ss_pred eccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhc-CCcccCCHHHH
Q 039449 164 FSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKS-GAIVLPDLVAV 242 (253)
Q Consensus 164 ~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~-~~~~i~~l~el 242 (253)
.+... .||+|+.+..++++++ ++++++++|||+. +|+.+|+++|+++|++. +|....+.+... ++++++++.||
T Consensus 131 ~~~~~--~~~~p~~~~~~~~~~~-~~~~~~v~VGDs~-~Di~aa~~aGi~~i~v~-~g~~~~~~l~~~~pd~vi~~l~el 205 (210)
T d2ah5a1 131 GSSPE--APHKADVIHQALQTHQ-LAPEQAIIIGDTK-FDMLGARETGIQKLAIT-WGFGEQADLLNYQPDYIAHKPLEV 205 (210)
T ss_dssp EECSS--CCSHHHHHHHHHHHTT-CCGGGEEEEESSH-HHHHHHHHHTCEEEEES-SSSSCHHHHHTTCCSEEESSTTHH
T ss_pred ccccc--ccccccccchhhhhhh-cccccceeecCCH-HHHHHHHHcCCeEEEEc-CCCCCHHHHHhCCCCEEECCHHHH
Confidence 77765 4788899999999999 9999999999999 89999999999999998 455556666554 56899999999
Q ss_pred HHHHh
Q 039449 243 KEFLT 247 (253)
Q Consensus 243 ~~~l~ 247 (253)
.++|+
T Consensus 206 ~~~le 210 (210)
T d2ah5a1 206 LAYFQ 210 (210)
T ss_dssp HHHTC
T ss_pred HHHhC
Confidence 98763
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.98 E-value=4.1e-32 Score=199.91 Aligned_cols=201 Identities=19% Similarity=0.217 Sum_probs=153.4
Q ss_pred eEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHHHc
Q 039449 8 RCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFVRA 87 (253)
Q Consensus 8 k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (253)
++++||+||||+|+.+.+..++..+++++|++... +.....+. +. .. ...+.......
T Consensus 2 ~a~iFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~-~~~~~~~~-------------~~----~~----~~~~~~~~~~~ 59 (204)
T d2go7a1 2 TAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDK-EKVREFIF-------------KY----SV----QDLLVRVAEDR 59 (204)
T ss_dssp CEEEECTBTTTEECHHHHHHHHHHHHHHHTCCCCH-HHHHHHHH-------------HS----CH----HHHHHHHHHHH
T ss_pred EEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCH-HHHHHhhc-------------cc----cc----ccccccccchh
Confidence 58999999999999888889999999999987543 22221110 00 11 12234444444
Q ss_pred CCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccc
Q 039449 88 GYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGL 167 (253)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~ 167 (253)
+. ..+.+......+..... ....++||+.++|+.|+++|++++|+||+.. .+..+++.+|+.. +|+.++.++.
T Consensus 60 ~~--~~~~~~~~~~~~~~~~~--~~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~--~f~~i~~s~~ 132 (204)
T d2go7a1 60 NL--DVEVLNQVRAQSLAEKN--AQVVLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVES--YFTEILTSQS 132 (204)
T ss_dssp TC--CHHHHHHHHHHHHTTCG--GGCEECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGG--GEEEEECGGG
T ss_pred hh--hHHHHHHHHHHHHHhhc--ccCcccchHHhhhhcccccccchhhhcccch-hhhhhhhhccccc--cccccccccc
Confidence 33 33444444444433222 2357899999999999999999999999876 4566899999998 9999999999
Q ss_pred cCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHHHHHHh
Q 039449 168 EGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKEFLT 247 (253)
Q Consensus 168 ~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~~~l~ 247 (253)
.+..||++++|..++++++ ++|++|+||||+. +|+.+|+++|+++|++.+ +.. ...+.+.++.++.++++
T Consensus 133 ~~~~Kp~~~~~~~~~~~~~-~~p~~~l~VgD~~-~Di~~A~~~G~~~i~v~~-~~~-------~~~~~~~~~~dl~~l~~ 202 (204)
T d2go7a1 133 GFVRKPSPEAATYLLDKYQ-LNSDNTYYIGDRT-LDVEFAQNSGIQSINFLE-STY-------EGNHRIQALADISRIFE 202 (204)
T ss_dssp CCCCTTSSHHHHHHHHHHT-CCGGGEEEEESSH-HHHHHHHHHTCEEEESSC-CSC-------TTEEECSSTTHHHHHTS
T ss_pred ccccchhHHHHHHHHHHhC-CCCceEEEEeCCH-HHHHHHHHcCCeEEEEcC-CCC-------CcCeecCCHHHHHHHhc
Confidence 9999999999999999999 9999999999999 899999999999999984 321 24467888988888775
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=99.97 E-value=8.3e-32 Score=205.21 Aligned_cols=219 Identities=12% Similarity=0.148 Sum_probs=155.2
Q ss_pred CceEEEEecCCceeccCCC-HHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHH-----
Q 039449 6 RLRCITVDVTGTLLAYKGE-LGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTC----- 79 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 79 (253)
++|+|+||+||||+|+... ...++..+++++|.... .+++... .|. ...+..+.+
T Consensus 1 kIkaviFD~dGTL~d~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~--------------~g~----~~~~~~~~~~~~~~ 61 (257)
T d1swva_ 1 KIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAIT-AEEARKP--------------MGL----LKIDHVRALTEMPR 61 (257)
T ss_dssp CCCEEEECSBTTTBSTTCCTTHHHHHHHHHTTTCCCC-HHHHHTT--------------TTS----CHHHHHHHHHHSHH
T ss_pred CcEEEEEcCCCCeEeCcchHHHHHHHHHHHHcCCCCC-HHHHHHH--------------hCC----cHHHHHHHHhhhhh
Confidence 5899999999999998764 47788899999998643 3332211 111 111111110
Q ss_pred -HHHHHHHcCCCCChHHHH---HHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCC
Q 039449 80 -VRDSFVRAGYDYDEDTFE---KIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQ 155 (253)
Q Consensus 80 -~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~ 155 (253)
.......++......... ..+...+..... ....++||+.++|+.|+++|++++++||++...++..++.+|+..
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~ 140 (257)
T d1swva_ 62 IASEWNRVFRQLPTEADIQEMYEEFEEILFAILP-RYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQG 140 (257)
T ss_dssp HHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHGG-GGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHhcccCCHHHHHHHHHHHHHHHHHHhh-ccCccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcc
Confidence 001111222222333322 333333333322 234789999999999999999999999999999999999999998
Q ss_pred Ccce-eEeeeccccCccCCCHHHHHHHHHHhCCCC-CCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCC----hh---
Q 039449 156 GTEW-DFGVFSGLEGVEKPDPRIYEIALERAGNIA-PEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPD----AK--- 226 (253)
Q Consensus 156 ~~~f-~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~-~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~----~~--- 226 (253)
+| +.++.+++.+..||+|+.|..++++++ +. +++|+||||+. +|+.+|+++|+.+|+|.+ |.+. .+
T Consensus 141 --~f~d~~~~~d~~~~~KP~p~~~~~~~~~l~-~~p~~~~v~VgDs~-~Di~aA~~aG~~ti~v~~-G~~~~~~~~~~~~ 215 (257)
T d1swva_ 141 --YKPDFLVTPDDVPAGRPYPWMCYKNAMELG-VYPMNHMIKVGDTV-SDMKEGRNAGMWTVGVIL-GSSELGLTEEEVE 215 (257)
T ss_dssp --CCCSCCBCGGGSSCCTTSSHHHHHHHHHHT-CCSGGGEEEEESSH-HHHHHHHHTTSEEEEECT-TCTTTCCCHHHHH
T ss_pred --cccccccccccccccccChHHHHHHHHHhC-CCCcceEEEEeCCh-hhHHHHHHCCCEEEEEcc-CCCCCCCCHHHHh
Confidence 66 666777788889999999999999999 85 58999999999 899999999999999984 3321 11
Q ss_pred ----------------hhhhc-CCcccCCHHHHHHHHhhh
Q 039449 227 ----------------EWRKS-GAIVLPDLVAVKEFLTSE 249 (253)
Q Consensus 227 ----------------~~~~~-~~~~i~~l~el~~~l~~~ 249 (253)
.+... ++++|+++.||..+|.+.
T Consensus 216 ~~~~~~~~~~~~~~~~~l~~~gad~vi~~l~eL~~ii~~~ 255 (257)
T d1swva_ 216 NMDSVELREKIEVVRNRFVENGAHFTIETMQELESVMEHI 255 (257)
T ss_dssp HSCHHHHHHHHHHHHHHHHHTTCSEEESSGGGHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHHhCCCCEEECCHHHHHHHHHHH
Confidence 11222 568999999999999875
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=99.97 E-value=2.8e-31 Score=197.82 Aligned_cols=186 Identities=18% Similarity=0.246 Sum_probs=144.0
Q ss_pred CceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHH
Q 039449 6 RLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFV 85 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (253)
|+|+|+||+||||+|+...+.+++..++.++|++........ ...+ ..... ..+..++
T Consensus 1 MikaiiFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~--------------~~~~----~~~~~----~~~~~~~ 58 (221)
T d1o08a_ 1 MFKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNE--------------QLKG----VSRED----SLQKILD 58 (221)
T ss_dssp CCCEEEECCBTTTBTHHHHHHHHHHHHHHHTTCCCCCHHHHT--------------TTTT----CCHHH----HHHHHHT
T ss_pred CCcEEEEcCCCCeEcCHHHHHHHHHHHHHHcCCCCChHHHHH--------------HHhh----ccchh----hhhhccc
Confidence 489999999999999888888899999999998765432111 0111 12222 2334455
Q ss_pred HcCCCCChHHHHHHHHH---HHHHhCC-CCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeE
Q 039449 86 RAGYDYDEDTFEKIFRR---IYASFGS-SAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDF 161 (253)
Q Consensus 86 ~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~ 161 (253)
..+...+.+.+...... .+..... .....++||+.++|+.|++.|++++++||+.. ....++..|+.. +|+.
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~--~f~~ 134 (221)
T d1o08a_ 59 LADKKVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTG--YFDA 134 (221)
T ss_dssp TSSSCCCHHHHHHHHHHHHHHHHHHTTTCCGGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGG--GCSE
T ss_pred cccccchhhhhhhHHHHHHhhccccccccccccccCCceeccccccccccceEEEeecch--hhHHHHhhcccc--cccc
Confidence 55555555554433322 2222222 23457899999999999999999999998644 677899999998 9999
Q ss_pred eeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcC
Q 039449 162 GVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDR 219 (253)
Q Consensus 162 ~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~ 219 (253)
++++++.+..||+|++|+.++++++ +++++|+||||+. +|+.+|+++|+++|+|++
T Consensus 135 i~~~~~~~~~KP~~~~~~~~l~~~~-i~~~~~l~VgD~~-~di~~A~~aG~~~i~v~~ 190 (221)
T d1o08a_ 135 IADPAEVAASKPAPDIFIAAAHAVG-VAPSESIGLEDSQ-AGIQAIKDSGALPIGVGR 190 (221)
T ss_dssp ECCTTTSSSCTTSTHHHHHHHHHTT-CCGGGEEEEESSH-HHHHHHHHHTCEEEEESC
T ss_pred ccccccccccccChHHHHHHHHHcC-CCCceEEEEecCH-HHHHHHHHcCCEEEEECC
Confidence 9999999999999999999999999 9999999999999 899999999999999984
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.97 E-value=1.5e-31 Score=200.27 Aligned_cols=216 Identities=15% Similarity=0.189 Sum_probs=157.1
Q ss_pred ceEEEEecCCceeccCCCHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHH
Q 039449 7 LRCITVDVTGTLLAYKGELGDYYCMAAKSV-GLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFV 85 (253)
Q Consensus 7 ~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (253)
.|+|+||+||||+++...+..++..++.+. +......... ..+ .... ......+.
T Consensus 2 ~klviFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~----~~~~----~~~~~~~~ 57 (228)
T d2hcfa1 2 RTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGSHD----------------FSG----KMDG----AIIYEVLS 57 (228)
T ss_dssp CEEEEECCBTTTEEECTHHHHHHHHHHHHHHSCCCCC---C----------------CTT----CCHH----HHHHHHHH
T ss_pred ceEEEEeCCCCcccCHHHHHHHHHHHHHHHcCCCccHHHHH----------------Hhc----CchH----HHHHHHHH
Confidence 489999999999999999888888877765 3332211100 000 0111 11222233
Q ss_pred HcCCCCC-----hHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcC-CEEEEEeCCCcchhhhhhhhcCCCCCcce
Q 039449 86 RAGYDYD-----EDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKG-LIVGIISNAEYRYQDVILPALGVNQGTEW 159 (253)
Q Consensus 86 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g-~~~~i~s~~~~~~~~~~l~~~gl~~~~~f 159 (253)
..+.... .+...+.+...+..........++||+.++|++|+++| ++++++||+....+...++.+|+.. +|
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~--~f 135 (228)
T d2hcfa1 58 NVGLERAEIADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDH--YF 135 (228)
T ss_dssp TTTCCHHHHHHHHHHHHHHHHHHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCST--TC
T ss_pred HhCCChHHHHHHHHHHHHHHHHHHHHHhhccCceecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccc--cc
Confidence 3333211 01122223333333333344578999999999999987 8999999999999999999999999 99
Q ss_pred eEeeeccccCccCCCHHHHHHHHHHh---CCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhc-CCcc
Q 039449 160 DFGVFSGLEGVEKPDPRIYEIALERA---GNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKS-GAIV 235 (253)
Q Consensus 160 ~~~~~~~~~~~~kp~~~~~~~~~~~~---~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~-~~~~ 235 (253)
+.++++++....||+|..+...+..+ + ++|++|+||||++ +|+.+|+++|+++|+|. ++....+.+... ++++
T Consensus 136 d~i~~~~~~~~~k~~p~~~~~~~~~~~~~~-~~p~~~l~VGD~~-~Di~aA~~aG~~~i~v~-~g~~~~~~l~~~~ad~v 212 (228)
T d2hcfa1 136 PFGAFADDALDRNELPHIALERARRMTGAN-YSPSQIVIIGDTE-HDIRCARELDARSIAVA-TGNFTMEELARHKPGTL 212 (228)
T ss_dssp SCEECTTTCSSGGGHHHHHHHHHHHHHCCC-CCGGGEEEEESSH-HHHHHHHTTTCEEEEEC-CSSSCHHHHHTTCCSEE
T ss_pred cccccccccccccchhHHHHHHhhhhcccC-CChhHheeecCCh-HHHHHHHHcCCEEEEEc-CCCCCHHHHhhCCCCEE
Confidence 99999988888899998877666665 6 8999999999999 89999999999999998 465556665554 4689
Q ss_pred cCCHHHHHHHHhhhhh
Q 039449 236 LPDLVAVKEFLTSEIS 251 (253)
Q Consensus 236 i~~l~el~~~l~~~~~ 251 (253)
++|++||.++|..+++
T Consensus 213 i~~~~el~~~l~~l~~ 228 (228)
T d2hcfa1 213 FKNFAETDEVLASILT 228 (228)
T ss_dssp ESCSCCHHHHHHHHHC
T ss_pred ECCHHHHHHHHHHHhC
Confidence 9999999999988764
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=99.97 E-value=4.2e-30 Score=191.21 Aligned_cols=218 Identities=19% Similarity=0.194 Sum_probs=152.0
Q ss_pred ceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHHH
Q 039449 7 LRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFVR 86 (253)
Q Consensus 7 ~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (253)
||+|+||+||||+|+... +..+.+.+... ................... .......................
T Consensus 2 IKaIiFD~dGTL~d~~~~----~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 72 (220)
T d1zrna_ 2 IKGIAFDLYGTLFDVHSV----VGRCDEAFPGR---GREISALWRQKQLEYTWLR--SLMNRYVNFQQATEDALRFTCRH 72 (220)
T ss_dssp CCEEEECSBTTTEETHHH----HHHHHHHSTTT---HHHHHHHHHHHHHHHHHHH--HHHTCCCCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCcEeCHHH----HHHHHHHHHHh---chhhhHHHHHHHHHHHhhh--hhhccchhHHHHHHhHHHHHHHh
Confidence 799999999999997642 22222222211 1111111111100000000 00112223444444445555566
Q ss_pred cCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeecc
Q 039449 87 AGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSG 166 (253)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~ 166 (253)
.+........... ..... ...+++++.++++.+++.|++++++||+....++..++..++.. +|+.++++.
T Consensus 73 ~~~~~~~~~~~~~----~~~~~---~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~--~fd~~~~s~ 143 (220)
T d1zrna_ 73 LGLDLDARTRSTL----CDAYL---RLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRD--GFDHLLSVD 143 (220)
T ss_dssp HTCCCCHHHHHHH----HHGGG---GCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG--GCSEEEESG
T ss_pred hhhhhhHHHHHHH----hhhhc---cccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccc--cccceeeee
Confidence 6655544332222 11111 24788999999999999999999999999999999999999988 999999999
Q ss_pred ccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHHHHH
Q 039449 167 LEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKEF 245 (253)
Q Consensus 167 ~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~~~ 245 (253)
+.+..||+|+.|+.+++++| ++|++|+||||+. .|+.+|+++|+++|++++++.... .....++++|+||.||+++
T Consensus 144 ~~~~~KP~p~~~~~~~~~~g-~~p~e~l~VgD~~-~Di~~A~~aG~~~v~v~r~~~~~~-~~~~~~d~~i~~l~el~~l 219 (220)
T d1zrna_ 144 PVQVYKPDNRVYELAEQALG-LDRSAILFVASNA-WDATGARYFGFPTCWINRTGNVFE-EMGQTPDWEVTSLRAVVEL 219 (220)
T ss_dssp GGTCCTTSHHHHHHHHHHHT-SCGGGEEEEESCH-HHHHHHHHHTCCEEEECTTCCCCC-SSSCCCSEEESSHHHHHTT
T ss_pred eeeccccHHHHHHHHHHHhC-CCCceEEEEecCh-HhHHHHHHcCCEEEEEcCCCCCcc-cccCCCCEEECCHHHHHhh
Confidence 99999999999999999999 9999999999999 899999999999999996554433 2344567899999999864
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.97 E-value=1.8e-29 Score=190.71 Aligned_cols=219 Identities=18% Similarity=0.237 Sum_probs=148.8
Q ss_pred CceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHH---HHHHHHHhhCCCCCCCCCCChHHHHHHHHHH
Q 039449 6 RLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFK---LAYKEMAKNYPCFGFAAKMPNIVWWKTCVRD 82 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (253)
|+|+|+||+||||+|+...+ ..+. ..++.. ......... ..+........ ............+..
T Consensus 1 MIKaviFD~dGTL~d~~~~~-~~~~---~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 68 (245)
T d1qq5a_ 1 MIKAVVFDAYGTLFDVQSVA-DATE---RAYPGR---GEYITQVWRQKQLEYSWLRALMG-----RYADFWSVTREALAY 68 (245)
T ss_dssp CCCEEEECTBTTTBCTTTTH-HHHH---HHSTTC---HHHHHHHHHHHHHHHHHHHHHHT-----CCCCHHHHHHHHHHH
T ss_pred CCeEEEEeCCCCcEeCHHHH-HHHH---HHHHhh---cchhHHHHHHHHhhHHHHHHhhc-----ccccHHHHHHHHHHH
Confidence 48999999999999976543 2222 222211 111111111 11111111111 111223333334455
Q ss_pred HHHHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEe
Q 039449 83 SFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFG 162 (253)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~ 162 (253)
.+...+............ .... ...++|++.+.|+.|+ ++.++++||+....+...++..++.. +|+.+
T Consensus 69 ~~~~~~~~~~~~~~~~l~----~~~~---~~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~--~fd~v 137 (245)
T d1qq5a_ 69 TLGTLGLEPDESFLADMA----QAYN---RLTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTD--SFDAV 137 (245)
T ss_dssp HHHHTTCCCCHHHHHHHH----GGGG---SCCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGG--GCSEE
T ss_pred HHHHhhhchHHHHHHHHH----hccc---ccccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhccccc--ccccc
Confidence 556655544433322222 1111 2478899999999886 57899999999999999999999988 99999
Q ss_pred eeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCC------------------
Q 039449 163 VFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPD------------------ 224 (253)
Q Consensus 163 ~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~------------------ 224 (253)
+++++.+..||+|++|..+++++| ++|++|+||||+. +|+.+|+++|+++|+|++++...
T Consensus 138 ~~s~~~~~~KP~p~~f~~a~~~lg-~~p~e~l~VgD~~-~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~ 215 (245)
T d1qq5a_ 138 ISVDAKRVFKPHPDSYALVEEVLG-VTPAEVLFVSSNG-FDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKA 215 (245)
T ss_dssp EEGGGGTCCTTSHHHHHHHHHHHC-CCGGGEEEEESCH-HHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHH
T ss_pred cccccccccCccHHHHHHHHHHhC-CChhhEEEEeCCH-HHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhh
Confidence 999999999999999999999999 9999999999999 89999999999999998644211
Q ss_pred ----hhhhhhcCCcccCCHHHHHHHHhhh
Q 039449 225 ----AKEWRKSGAIVLPDLVAVKEFLTSE 249 (253)
Q Consensus 225 ----~~~~~~~~~~~i~~l~el~~~l~~~ 249 (253)
.+.+...++++++|+.||+++|+..
T Consensus 216 ~~~~~~~~~~~pd~~i~~l~el~~lv~~~ 244 (245)
T d1qq5a_ 216 LRMREETYAEAPDFVVPALGDLPRLVRGM 244 (245)
T ss_dssp HHSSCCTTSCCCSEEESSGGGHHHHHHHH
T ss_pred hhhhhhhccCCCCEEECCHHHHHHHHHhh
Confidence 0111234678999999999998753
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.8e-29 Score=191.25 Aligned_cols=127 Identities=17% Similarity=0.146 Sum_probs=108.3
Q ss_pred CCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeee-ccccCccCCCHHHHHHHHHHhCCCCC
Q 039449 112 PYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVF-SGLEGVEKPDPRIYEIALERAGNIAP 190 (253)
Q Consensus 112 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~-~~~~~~~kp~~~~~~~~~~~~~~~~~ 190 (253)
...++||+.+++.+|+++|++++++||+....++..++..|+.. +|+.... .+.....||+|++|..++++++ ++|
T Consensus 125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~KP~p~~~~~~~~~~~-~~p 201 (253)
T d1zs9a1 125 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGD--ILELVDGHFDTKIGHKVESESYRKIADSIG-CST 201 (253)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBC--CGGGCSEEECGGGCCTTCHHHHHHHHHHHT-SCG
T ss_pred ccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcch--hhhhcceeeccccccCCCcHHHHHHHHHhC-CCc
Confidence 35789999999999999999999999999999999999999987 6664333 3455678999999999999999 999
Q ss_pred CceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHH
Q 039449 191 EEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAV 242 (253)
Q Consensus 191 ~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el 242 (253)
++|+||||+. +|+.+|+++|+++|++++++...........+.+|+||+||
T Consensus 202 ~~~l~vgD~~-~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~sl~EL 252 (253)
T d1zs9a1 202 NNILFLTDVT-REASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSEL 252 (253)
T ss_dssp GGEEEEESCH-HHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGGC
T ss_pred CcEEEEeCCH-HHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEECChHHh
Confidence 9999999999 89999999999999999766554444344456789999886
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.96 E-value=4.2e-30 Score=191.51 Aligned_cols=212 Identities=16% Similarity=0.195 Sum_probs=156.9
Q ss_pred ceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHHH
Q 039449 7 LRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFVR 86 (253)
Q Consensus 7 ~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (253)
+|+|+||+||||+|+...+..++..+++++|++.+ .++....+ .| ++.. ..+......
T Consensus 2 ~kaviFD~DGtL~dt~~~~~~a~~~~~~~~g~~~~-~~~~~~~~-------------~g----~~~~----~~~~~~~~~ 59 (222)
T d2fdra1 2 FDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPIS-VEEMGERF-------------AG----MTWK----NILLQVESE 59 (222)
T ss_dssp CSEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCC-HHHHHHHH-------------TT----CCHH----HHHHHHHHH
T ss_pred ceEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCC-HHHHHHHH-------------hh----hccc----ccccccccc
Confidence 79999999999999988888999999999998754 33332211 11 2222 334455666
Q ss_pred cCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeecc
Q 039449 87 AGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSG 166 (253)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~ 166 (253)
.+.+...+........+..... ....++||+.++|+.++. +.+++|+.....++..++++|+.. +|+..+++.
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~L~~l~~---~~~i~t~~~~~~~~~~l~~~~l~~--~f~~~~~~~ 132 (222)
T d2fdra1 60 ASIPLSASLLDKSEKLLDMRLE--RDVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKP--YFAPHIYSA 132 (222)
T ss_dssp HCCCCCTHHHHHHHHHHHHHHH--HHCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGG--GTTTCEEEH
T ss_pred ccccccccchhHHHHHHHHHhh--hccchhhhHHHHhhhccc---cceeeeecchhhhhhhhccccccc--ccceeeccc
Confidence 6666554444433333322221 124788999999988864 557999999999999999999998 888766654
Q ss_pred c---cCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCC---hhhhhhc-CCcccCCH
Q 039449 167 L---EGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPD---AKEWRKS-GAIVLPDL 239 (253)
Q Consensus 167 ~---~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~---~~~~~~~-~~~~i~~l 239 (253)
. .+..||+|+.|..++++++ ++|++|++|||+. .|+.+|+++|+.+|++.+..... ...+... ++++|+|+
T Consensus 133 ~~~~~~~~KP~~~~~~~~~~~l~-~~p~~~l~vgDs~-~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~l 210 (222)
T d2fdra1 133 KDLGADRVKPKPDIFLHGAAQFG-VSPDRVVVVEDSV-HGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRM 210 (222)
T ss_dssp HHHCTTCCTTSSHHHHHHHHHHT-CCGGGEEEEESSH-HHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCG
T ss_pred ccccccccccCHHHHHHHHHhhC-CCCceEEEEcCCH-HHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEECCH
Confidence 4 3567999999999999999 9999999999999 89999999999999998432221 2233333 56899999
Q ss_pred HHHHHHHhhh
Q 039449 240 VAVKEFLTSE 249 (253)
Q Consensus 240 ~el~~~l~~~ 249 (253)
.||..+|..+
T Consensus 211 ~eL~~ll~~l 220 (222)
T d2fdra1 211 QDLPAVIAAM 220 (222)
T ss_dssp GGHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999998765
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.96 E-value=3.7e-29 Score=181.39 Aligned_cols=177 Identities=17% Similarity=0.118 Sum_probs=136.3
Q ss_pred cCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHH
Q 039449 5 SRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSF 84 (253)
Q Consensus 5 ~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (253)
|++|+|+||+||||+|+...+..++.++++.+|+... ...+...+... ....+
T Consensus 1 M~~k~viFD~DGTL~dt~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~--------------------------~~~~~ 53 (187)
T d2fi1a1 1 MKYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQD-HDSVYQALKVS--------------------------TPFAI 53 (187)
T ss_dssp CCCSEEEECTBTTTBCHHHHHHHHHHHHHHHTTCCCC-HHHHHHHHHHC--------------------------HHHHH
T ss_pred CCCCEEEEeCCCCcccCHHHHHHHHHHHHHHcCCCcc-HHHHHhhhhcc--------------------------chhhh
Confidence 5699999999999999988888999999999998753 23332222111 11112
Q ss_pred HHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeee
Q 039449 85 VRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVF 164 (253)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~ 164 (253)
+.... ..+.+.+.+.+.+..... ...++||+.++|+.|+++|++++++||...... ..++.+++.. +|+.+++
T Consensus 54 ~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~--~fd~i~~ 126 (187)
T d2fi1a1 54 ETFAP--NLENFLEKYKENEARELE--HPILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAA--YFTEVVT 126 (187)
T ss_dssp HHHCT--TCTTHHHHHHHHHHHHTT--SCCBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGG--GEEEEEC
T ss_pred hhhhH--HHHHHHHHHHHHHHHHhh--cCcccchhHHHHHHHHhhhccccccccCccchh-hhhhhhcccc--ccccccc
Confidence 22222 223334444443333332 247899999999999999999999999876555 4789999998 9999999
Q ss_pred ccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcC
Q 039449 165 SGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDR 219 (253)
Q Consensus 165 ~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~ 219 (253)
+++.+..||+|+.|..++++++ + +++++|||+. +|+.+|+++|++++++++
T Consensus 127 ~~~~~~~KP~p~~~~~~~~~~~-~--~~~l~vgDs~-~Di~aA~~aG~~~i~v~~ 177 (187)
T d2fi1a1 127 SSSGFKRKPNPESMLYLREKYQ-I--SSGLVIGDRP-IDIEAGQAAGLDTHLFTS 177 (187)
T ss_dssp GGGCCCCTTSCHHHHHHHHHTT-C--SSEEEEESSH-HHHHHHHHTTCEEEECSC
T ss_pred cccccccCCCHHHHHHHHHHcC-C--CCeEEEeCCH-HHHHHHHHcCCEEEEECC
Confidence 9988999999999999999998 6 4699999999 899999999999999984
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.93 E-value=2.4e-26 Score=170.84 Aligned_cols=103 Identities=23% Similarity=0.334 Sum_probs=93.3
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcch----hhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCC
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRY----QDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNI 188 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~----~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~ 188 (253)
..++|++.++|..|+++|++++++||+.... ....+...|+.+ +|+.++.+++.+..||+|++|+.++++++ +
T Consensus 96 ~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~--~fd~i~~s~~~~~~KP~p~~~~~~~~~~~-v 172 (222)
T d1cr6a1 96 RSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQ--HFDFLIESCQVGMIKPEPQIYNFLLDTLK-A 172 (222)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGG--GCSEEEEHHHHSCCTTCHHHHHHHHHHHT-S
T ss_pred CCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHh--hhceeeehhhccCCCCChHHHHHHHHHhC-C
Confidence 4788999999999999999999999875543 344456778988 99999999999999999999999999999 9
Q ss_pred CCCceEEEcCCcccchhhhhhcCCeEEEEcC
Q 039449 189 APEEALHIGDSFRKDYVPAKSVGMHALLVDR 219 (253)
Q Consensus 189 ~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~ 219 (253)
+|++|+||||+. +|+.+|+++|+++|+|.+
T Consensus 173 ~p~~~l~IgD~~-~Di~~A~~aG~~ti~V~~ 202 (222)
T d1cr6a1 173 KPNEVVFLDDFG-SNLKPARDMGMVTILVHN 202 (222)
T ss_dssp CTTSEEEEESSS-TTTHHHHHHTCEEEECCS
T ss_pred CcceEEEEECCH-HHHHHHHHcCCEEEEECC
Confidence 999999999999 899999999999999984
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=7.4e-26 Score=168.19 Aligned_cols=103 Identities=23% Similarity=0.326 Sum_probs=92.3
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhh----hhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCC
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVIL----PALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNI 188 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l----~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~ 188 (253)
..++|++.++|..|+++|++++++||.........+ ...++.+ +|+.++.+++.+..||+|++|..+++.++ +
T Consensus 98 ~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~--~fd~i~~s~~~~~~KP~~~~~~~~~~~~~-~ 174 (225)
T d1zd3a1 98 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKM--HFDFLIESCQVGMVKPEPQIYKFLLDTLK-A 174 (225)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHT--TSSEEEEHHHHTCCTTCHHHHHHHHHHHT-C
T ss_pred CCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHh--hccEEEeccccccchhHHHHHHHHhhhcc-c
Confidence 377899999999999999999999998776544333 3456777 89999999999999999999999999999 9
Q ss_pred CCCceEEEcCCcccchhhhhhcCCeEEEEcC
Q 039449 189 APEEALHIGDSFRKDYVPAKSVGMHALLVDR 219 (253)
Q Consensus 189 ~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~ 219 (253)
+|++++||||+. +|+.+|+++|+++|++++
T Consensus 175 ~p~e~l~VgD~~-~Di~~A~~~G~~ti~v~~ 204 (225)
T d1zd3a1 175 SPSEVVFLDDIG-ANLKPARDLGMVTILVQD 204 (225)
T ss_dssp CGGGEEEEESCH-HHHHHHHHTTCEEEECSS
T ss_pred CccceeEEecCH-HHHHHHHHcCCEEEEECC
Confidence 999999999998 899999999999999984
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=99.91 E-value=1.4e-24 Score=157.85 Aligned_cols=103 Identities=22% Similarity=0.355 Sum_probs=95.4
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhc-CCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCC
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPAL-GVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPE 191 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~-gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 191 (253)
..+++++.+++..++++|++++++||+........+... ++.. +|+.+++++..+..||+|++|+.++++++ ++|+
T Consensus 83 ~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~--~fd~v~~s~~~~~~Kp~~~~~~~~~~~~~-~~~~ 159 (197)
T d2b0ca1 83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRD--AADHIYLSQDLGMRKPEARIYQHVLQAEG-FSPS 159 (197)
T ss_dssp EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHH--HCSEEEEHHHHTCCTTCHHHHHHHHHHHT-CCGG
T ss_pred cccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchh--hccceeecccccccccchHHHHHHHHhcC-CCCC
Confidence 367889999999999999999999999888877777765 7887 99999999999999999999999999999 9999
Q ss_pred ceEEEcCCcccchhhhhhcCCeEEEEcC
Q 039449 192 EALHIGDSFRKDYVPAKSVGMHALLVDR 219 (253)
Q Consensus 192 ~~~~iGD~~~~Di~~a~~~G~~~i~~~~ 219 (253)
+|+||||++ +|+.+|+++|+++|++++
T Consensus 160 ~~l~vgDs~-~di~~A~~aG~~ti~v~~ 186 (197)
T d2b0ca1 160 DTVFFDDNA-DNIEGANQLGITSILVKD 186 (197)
T ss_dssp GEEEEESCH-HHHHHHHTTTCEEEECCS
T ss_pred eEEEEeCCH-HHHHHHHHcCCEEEEECC
Confidence 999999999 899999999999999985
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.90 E-value=1.1e-23 Score=156.58 Aligned_cols=118 Identities=19% Similarity=0.173 Sum_probs=89.1
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcc-----------hhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHH
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYR-----------YQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIAL 182 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~-----------~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~ 182 (253)
.+++++.+++ ..+..+++.|+.... .+...++.+|+.+ +|+.++.++. ...||+|++|..++
T Consensus 97 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~Fd~v~~~~~-~~~KP~p~~f~~~~ 169 (225)
T d2g80a1 97 PVYADAIDFI----KRKKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNS--YIDGYFDINT-SGKKTETQSYANIL 169 (225)
T ss_dssp CCCHHHHHHH----HHCSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGG--GCCEEECHHH-HCCTTCHHHHHHHH
T ss_pred cchhhHHHHH----hhHHhhhhhhhccchhhhhhhhhhhhhHHHHHHhcCCcc--ccceeeeccc-cCCCCChhHhHHHH
Confidence 3444444444 344677788877543 3445667889988 9998776644 44799999999999
Q ss_pred HHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHH
Q 039449 183 ERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAV 242 (253)
Q Consensus 183 ~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el 242 (253)
+++| ++|++|+||||+. +|+.+|+++|+++|++++++...... ..+..+|++++||
T Consensus 170 ~~lg-~~p~e~l~VgD~~-~Dv~~A~~aG~~ti~v~r~g~~~~~~--~~~~~~i~~~~eL 225 (225)
T d2g80a1 170 RDIG-AKASEVLFLSDNP-LELDAAAGVGIATGLASRPGNAPVPD--GQKYQVYKNFETL 225 (225)
T ss_dssp HHHT-CCGGGEEEEESCH-HHHHHHHTTTCEEEEECCTTSCCCCS--SCCSCEESCSTTC
T ss_pred Hhcc-cCchhceeecCCH-HHHHHHHHcCCEEEEEeCCCCCCCcc--cCCCCccCChhhC
Confidence 9999 9999999999999 89999999999999999766543332 2344578888775
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.90 E-value=4.3e-25 Score=156.10 Aligned_cols=98 Identities=10% Similarity=0.163 Sum_probs=86.3
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcc-hhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCC
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYR-YQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPE 191 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~-~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 191 (253)
+.++||+.++|+.|+++|++++++||+... ..+..++.+++.. +|..+. ...||+++.+..++++++ ++++
T Consensus 45 ~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~--~~~~~~-----~~~kp~~~~~~~~~~~~~-~~~~ 116 (164)
T d1u7pa_ 45 IQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGK--YFIQRE-----IYPGSKVTHFERLHHKTG-VPFS 116 (164)
T ss_dssp ECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGG--GCSEEE-----ESSSCHHHHHHHHHHHHC-CCGG
T ss_pred cccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccc--cceeee-----cccCCChHHHHHHHHHhC-CChH
Confidence 578999999999999999999999988764 4566778888877 665543 346899999999999999 9999
Q ss_pred ceEEEcCCcccchhhhhhcCCeEEEEcC
Q 039449 192 EALHIGDSFRKDYVPAKSVGMHALLVDR 219 (253)
Q Consensus 192 ~~~~iGD~~~~Di~~a~~~G~~~i~~~~ 219 (253)
+++||||+. .|+.+|+++|+.+|+|.+
T Consensus 117 ~~l~igD~~-~di~aA~~aG~~~i~v~~ 143 (164)
T d1u7pa_ 117 QMVFFDDEN-RNIIDVGRLGVTCIHIRD 143 (164)
T ss_dssp GEEEEESCH-HHHHHHHTTTCEEEECSS
T ss_pred HEEEEcCCH-HHHHHHHHcCCEEEEECC
Confidence 999999999 899999999999999983
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=99.89 E-value=4.5e-23 Score=147.97 Aligned_cols=130 Identities=17% Similarity=0.191 Sum_probs=97.6
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcch---------------hhhhhhhcCCCCCcceeEeeecc-----------
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRY---------------QDVILPALGVNQGTEWDFGVFSG----------- 166 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~---------------~~~~l~~~gl~~~~~f~~~~~~~----------- 166 (253)
++++||+.++|+.|+++|++++++||.+... ....+...|+.. +...++.
T Consensus 26 ~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~cp~~p~~~~~~~~ 101 (182)
T d2gmwa1 26 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDL----DGIYYCPHHPQGSVEEFR 101 (182)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCC----SEEEEECCBTTCSSGGGB
T ss_pred eeECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhcccc----cceeeccccccccccccc
Confidence 3788999999999999999999999986411 112223333332 2222221
Q ss_pred -ccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHHHHH
Q 039449 167 -LEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKEF 245 (253)
Q Consensus 167 -~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~~~ 245 (253)
....+||+|.++..++++++ +++++++||||+. +|+++|+++|++++++.+++....+.....+++++.|+.|+.++
T Consensus 102 ~~~~~rKP~p~m~~~~~~~~~-i~~~~s~mVGDs~-~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~l~dl~~~ 179 (182)
T d2gmwa1 102 QVCDCRKPHPGMLLSARDYLH-IDMAASYMVGDKL-EDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQA 179 (182)
T ss_dssp SCCSSSTTSCHHHHHHHHHHT-BCGGGCEEEESSH-HHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHH
T ss_pred ccccccCCccccccchhhhcc-cccccccccCCCH-HHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECCHHHHHHH
Confidence 22346999999999999999 9999999999999 89999999999774443355554455455678999999999999
Q ss_pred Hhh
Q 039449 246 LTS 248 (253)
Q Consensus 246 l~~ 248 (253)
|++
T Consensus 180 ikk 182 (182)
T d2gmwa1 180 IKK 182 (182)
T ss_dssp HHC
T ss_pred hcC
Confidence 874
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=99.86 E-value=3.1e-22 Score=151.02 Aligned_cols=108 Identities=18% Similarity=0.184 Sum_probs=75.7
Q ss_pred EEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcC
Q 039449 132 IVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVG 211 (253)
Q Consensus 132 ~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G 211 (253)
...+.++..............+.. ++............||+|.++..+++++| ++|++|+||||++.+||.+|+++|
T Consensus 138 ~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~KP~p~~~~~a~~~lg-i~p~e~v~IGD~~~~DI~~a~~aG 214 (250)
T d2c4na1 138 ARFIATNPDTHGRGFYPACGALCA--GIEKISGRKPFYVGKPSPWIIRAALNKMQ-AHSEETVIVGDNLRTDILAGFQAG 214 (250)
T ss_dssp CEEEESCCCSBSSTTCBCHHHHHH--HHHHHHCCCCEECSTTSTHHHHHHHHHHT-CCGGGEEEEESCTTTHHHHHHHTT
T ss_pred ccccccccccccCceeecCcchHH--HHHHhhcccchhcccchhhhHhhhhhhhc-CCchheEEecCChHHHHHHHHHCC
Confidence 445666665533222111111222 33333334445667999999999999999 999999999999856999999999
Q ss_pred CeEEEEcCCCCCChhhhhh---cCCcccCCHHHHH
Q 039449 212 MHALLVDRFKTPDAKEWRK---SGAIVLPDLVAVK 243 (253)
Q Consensus 212 ~~~i~~~~~~~~~~~~~~~---~~~~~i~~l~el~ 243 (253)
+++|+|. +|....+.+.. .++++++|+.||.
T Consensus 215 ~~tilV~-~G~~~~~~l~~~~~~pd~i~~sl~eL~ 248 (250)
T d2c4na1 215 LETILVL-SGVSSLDDIDSMPFRPSWIYPSVAEID 248 (250)
T ss_dssp CEEEEES-SSSCCGGGGSSCSSCCSEEESSGGGCC
T ss_pred CCEEEEC-CCCCCHHHHHhCCCCCCEEECCHHHhC
Confidence 9999998 46555555544 3468999999863
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.86 E-value=1.3e-21 Score=145.42 Aligned_cols=130 Identities=11% Similarity=0.040 Sum_probs=98.5
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeE--eeecc-----------ccCccCCCHHHHHH
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDF--GVFSG-----------LEGVEKPDPRIYEI 180 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~--~~~~~-----------~~~~~kp~~~~~~~ 180 (253)
+++|++.++++.|+++|++++++|++....++.+++++|+.. +|.. ..+.+ .....++++.....
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~--~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 152 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKD--RIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPS 152 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGG--GEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHHH
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCcc--ceeeeeEEEeCCcceeccccccccccccCCHHHHHH
Confidence 788999999999999999999999999999999999999877 5422 11111 11223778889999
Q ss_pred HHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHHHHHHhhhh
Q 039449 181 ALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKEFLTSEI 250 (253)
Q Consensus 181 ~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~~~l~~~~ 250 (253)
+++.++ +++++++||||+. +|+.+|++||+..+.-. . .........+...++|++++...|++..
T Consensus 153 ~~~~~~-~~~~~~i~iGDs~-~Dl~~a~~A~~~~a~~~--~-~~~~~~~~~~~~~~~d~~~i~~~l~~~~ 217 (226)
T d2feaa1 153 VIHELS-EPNQYIIMIGDSV-TDVEAAKLSDLCFARDY--L-LNECREQNLNHLPYQDFYEIRKEIENVK 217 (226)
T ss_dssp HHHHHC-CTTCEEEEEECCG-GGHHHHHTCSEEEECHH--H-HHHHHHTTCCEECCSSHHHHHHHHHTSH
T ss_pred HHHHhc-CCCceEEEEeCch-hhHHHHHHCCEEEEecc--h-HHHHHHcCCCeeecCCHHHHHHHHHHHH
Confidence 999999 9999999999999 99999999997543211 1 1111111223467899999998887643
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=99.86 E-value=2.4e-22 Score=146.45 Aligned_cols=126 Identities=19% Similarity=0.220 Sum_probs=87.9
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCc---------------chhhhhhhhcCCCCCcceeEeeeccc----------
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEY---------------RYQDVILPALGVNQGTEWDFGVFSGL---------- 167 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~---------------~~~~~~l~~~gl~~~~~f~~~~~~~~---------- 167 (253)
+.++||+.++|++|+++|++++|+||.+. ..+...++..|+. ++.++.+..
T Consensus 47 ~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~----~~~~~~~~~~~~~~~~~~~ 122 (209)
T d2o2xa1 47 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF----VDMVLACAYHEAGVGPLAI 122 (209)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC----CSEEEEECCCTTCCSTTCC
T ss_pred eEecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhcccc----cceEEEecccccccccccc
Confidence 37889999999999999999999999531 1122334444442 222222211
Q ss_pred --cCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHHHHH
Q 039449 168 --EGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKEF 245 (253)
Q Consensus 168 --~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~~~ 245 (253)
...+||+|.++..+++.++ +++++++||||+. +|+++|+++|++++++.. +...... ......+.++.++.++
T Consensus 123 ~~~~~rKP~p~ml~~a~~~~~-i~~~~~~~VGD~~-~Di~aA~~AGi~~i~v~~-g~~~~~~--~~~~~~~~~~~e~~dl 197 (209)
T d2o2xa1 123 PDHPMRKPNPGMLVEAGKRLA-LDLQRSLIVGDKL-ADMQAGKRAGLAQGWLVD-GEAAVQP--GFAIRPLRDSSELGDL 197 (209)
T ss_dssp SSCTTSTTSCHHHHHHHHHHT-CCGGGCEEEESSH-HHHHHHHHTTCSEEEEET-CCCEEET--TEEEEEESSHHHHHHH
T ss_pred cccccccccchhhhHhHHHhC-CCccceEEeCCCH-HHHHHHHHCCCcEEEEeC-CCCcccC--CccccCccchhHHHHH
Confidence 1235999999999999999 9999999999999 899999999999999873 3322111 1112345556665555
Q ss_pred Hh
Q 039449 246 LT 247 (253)
Q Consensus 246 l~ 247 (253)
+.
T Consensus 198 l~ 199 (209)
T d2o2xa1 198 LA 199 (209)
T ss_dssp HH
T ss_pred HH
Confidence 43
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.86 E-value=3.1e-21 Score=142.26 Aligned_cols=198 Identities=12% Similarity=0.104 Sum_probs=119.9
Q ss_pred ccCceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHH
Q 039449 4 LSRLRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDS 83 (253)
Q Consensus 4 ~~~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (253)
+.+.++|+||+||||++.. .+..+....|..... ..+.. ....+.++..++....
T Consensus 7 ~~~~~aV~FD~DGTLi~~e-----~~~~l~~~~g~~~~~-~~~~~---------------~~~~g~~~~~~~~~~~---- 61 (217)
T d1nnla_ 7 FYSADAVCFDVDSTVIREE-----GIDELAKICGVEDAV-SEMTR---------------RAMGGAVPFKAALTER---- 61 (217)
T ss_dssp HHHCSEEEEETBTTTBSSC-----HHHHHHHHTTCTTTC----------------------------CHHHHHHHH----
T ss_pred hCCCCEEEEcCccccCCcc-----HHHHHHHHcCChHHH-HHHHH---------------HHHcCCCCHHHHHHHH----
Confidence 3457899999999999864 345556667765322 11111 0011223333332221
Q ss_pred HHHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEee
Q 039449 84 FVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGV 163 (253)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~ 163 (253)
+..+. ....+. ...... ....++||+.+++++|+++|++++|+|++....++.+++.+|++.+..+...+
T Consensus 62 ~~~~~--~~~~~~---~~~~~~-----~~~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~ 131 (217)
T d1nnla_ 62 LALIQ--PSREQV---QRLIAE-----QPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRL 131 (217)
T ss_dssp HHHHC--CCHHHH---HHHHHH-----SCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECE
T ss_pred HHhcc--cchHHH---HHHHHh-----hccccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeee
Confidence 11111 122222 122221 12478999999999999999999999999999999999999998632332212
Q ss_pred eccc----cCc--------cCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhc
Q 039449 164 FSGL----EGV--------EKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKS 231 (253)
Q Consensus 164 ~~~~----~~~--------~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~ 231 (253)
.... .+. ...|...++.+.+.+ ++++|++|||+. +|+.+++.+|+++++ + +.+........
T Consensus 132 ~~~~~G~~~g~~~~~p~~~~~~K~~~v~~~~~~~---~~~~~~~vGDs~-~Di~~~~~ag~~va~-~--~~~~~~~~~~~ 204 (217)
T d1nnla_ 132 KFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKF---HFKKIIMIGDGA-TDMEACPPADAFIGF-G--GNVIRQQVKDN 204 (217)
T ss_dssp EECTTSCEEEECTTSGGGSTTHHHHHHHHHHHHH---CCSCEEEEESSH-HHHTTTTTSSEEEEE-C--SSCCCHHHHHH
T ss_pred eeeehhccccceeeeeeeccchHHHHHHHHHhcc---CccccEEEEeCH-hhHHHHHhCCceEEE-C--CCHHHHHHHHh
Confidence 1111 111 122445566555544 478999999999 999999999987554 3 22333444555
Q ss_pred CCcccCCHHHHH
Q 039449 232 GAIVLPDLVAVK 243 (253)
Q Consensus 232 ~~~~i~~l~el~ 243 (253)
.++.+.|+.||+
T Consensus 205 ad~~i~~f~ell 216 (217)
T d1nnla_ 205 AKWYITDFVELL 216 (217)
T ss_dssp CSEEESCGGGGC
T ss_pred CCCEeCCHHHhc
Confidence 778899998873
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=99.85 E-value=4e-22 Score=139.26 Aligned_cols=101 Identities=23% Similarity=0.284 Sum_probs=77.6
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcc---------------hhhhhhhhcCCCCCcceeEeeec-----cccCccC
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYR---------------YQDVILPALGVNQGTEWDFGVFS-----GLEGVEK 172 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~---------------~~~~~l~~~gl~~~~~f~~~~~~-----~~~~~~k 172 (253)
+.++||+.++|+.|+++|++++++||.+.. .....+...|+. ++.++++ .....+|
T Consensus 29 ~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~----~~~i~~~~~~~~~~~~~~K 104 (161)
T d2fpwa1 29 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ----FDEVLICPHLPADECDCRK 104 (161)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCC----EEEEEEECCCGGGCCSSST
T ss_pred ceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccc----cceeeeccccccccccccc
Confidence 378899999999999999999999997521 123344555553 2443443 3334569
Q ss_pred CCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcC
Q 039449 173 PDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDR 219 (253)
Q Consensus 173 p~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~ 219 (253)
|+|.++..++++++ +++++++||||+. +|+++|+++|++++++++
T Consensus 105 P~p~~~~~~~~~~~-id~~~~~~IGD~~-~Di~aA~~aG~~~i~i~~ 149 (161)
T d2fpwa1 105 PKVKLVERYLAEQA-MDRANSYVIGDRA-TDIQLAENMGINGLRYDR 149 (161)
T ss_dssp TSSGGGGGGC-----CCGGGCEEEESSH-HHHHHHHHHTSEEEECBT
T ss_pred cccHHHHHHHHhcC-CChhcEEEECCCH-HHHHHHHHcCCeEEEECC
Confidence 99999999999999 9999999999999 899999999999999984
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=99.84 E-value=7.4e-21 Score=144.37 Aligned_cols=78 Identities=19% Similarity=0.322 Sum_probs=66.5
Q ss_pred cCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhh---cCCcccCCHHHHHH
Q 039449 168 EGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRK---SGAIVLPDLVAVKE 244 (253)
Q Consensus 168 ~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~---~~~~~i~~l~el~~ 244 (253)
....||+|..+..++++++ +++++++||||++.+||.+|+++|+++|+|. +|......+.. .++++++|+.||.+
T Consensus 181 ~~~~KP~p~~~~~a~~~l~-~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~-~G~~~~~~~~~~~~~PD~ii~~l~eL~~ 258 (261)
T d1vjra_ 181 LIAGKPNPLVVDVISEKFG-VPKERMAMVGDRLYTDVKLGKNAGIVSILVL-TGETTPEDLERAETKPDFVFKNLGELAK 258 (261)
T ss_dssp EECSTTSTHHHHHHHHHHT-CCGGGEEEEESCHHHHHHHHHHHTCEEEEES-SSSCCHHHHHHCSSCCSEEESSHHHHHH
T ss_pred cccCCCcHHHHHHHHhhhc-cCchhcceecCChhHHHHHHHHCCCcEEEEC-CCCCCHHHHhhcCCCCCEEECCHHHHHH
Confidence 3457999999999999999 9999999999997579999999999999998 56555554433 35799999999999
Q ss_pred HHh
Q 039449 245 FLT 247 (253)
Q Consensus 245 ~l~ 247 (253)
+|+
T Consensus 259 ~l~ 261 (261)
T d1vjra_ 259 AVQ 261 (261)
T ss_dssp HHC
T ss_pred HhC
Confidence 874
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=99.83 E-value=5.7e-21 Score=144.27 Aligned_cols=119 Identities=20% Similarity=0.121 Sum_probs=77.1
Q ss_pred HHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCC-CcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCc
Q 039449 122 FLRWAREKGLIVGIISNAEYRYQDVILPALGVNQ-GTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSF 200 (253)
Q Consensus 122 ~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~-~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~ 200 (253)
.+..+..++...+|+||.+...........+... ...+...........+||+|.+++.++++++ +++++|+||||++
T Consensus 129 ~~~~~~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gKP~p~~~~~al~~l~-i~~~~~~mIGDs~ 207 (253)
T d1wvia_ 129 TLATLAIQKGAVFIGTNPDLNIPTERGLLPGAGAILFLLEKATRVKPIIIGKPEAVIMNKALDRLG-VKRHEAIMVGDNY 207 (253)
T ss_dssp HHHHHHHHTTCEEEESCCCSEEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHHHT-SCGGGEEEEESCT
T ss_pred HHHhhhhhhccccccCCCCceeEcCCcccccCCcchhcccccccceeEEeccCCcccceehhhhcc-ccccceEEEcCCh
Confidence 3333444455667889886644332111111100 0011111112223345999999999999999 9999999999998
Q ss_pred ccchhhhhhcCCeEEEEcCCCCCChhhhhhc---CCcccCCHHHH
Q 039449 201 RKDYVPAKSVGMHALLVDRFKTPDAKEWRKS---GAIVLPDLVAV 242 (253)
Q Consensus 201 ~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~---~~~~i~~l~el 242 (253)
.+||.+|+++|+++|+|. +|....+.+... ++++++|+.|+
T Consensus 208 ~~DI~gA~~aG~~si~V~-~G~~~~~~~~~~~~~PD~vi~sl~e~ 251 (253)
T d1wvia_ 208 LTDITAGIKNDIATLLVT-TGFTKPEEVPALPIQPDFVLSSLAEW 251 (253)
T ss_dssp TTTHHHHHHTTCEEEEES-SSSSCTTTGGGCSSCCSEEESCGGGC
T ss_pred HHHHHHHHHCCCCEEEEC-CCCCCHHHHhhcCCCCCEEECCHHHc
Confidence 569999999999999998 354434333333 47999999875
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.80 E-value=4.4e-19 Score=129.81 Aligned_cols=123 Identities=17% Similarity=0.230 Sum_probs=97.9
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeecccc----------CccCCCHHHHHHHHH
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLE----------GVEKPDPRIYEIALE 183 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~----------~~~kp~~~~~~~~~~ 183 (253)
.+++++.+.+..++.+|..++++|+..........+..+... ++...+..... ...++++..+...++
T Consensus 75 ~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (210)
T d1j97a_ 75 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDY--AFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAK 152 (210)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSE--EEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhh--hhhhhhccccccccccccccccccccccchhhhHHH
Confidence 778999999999999999999999998888888888887776 55544433221 233667889999999
Q ss_pred HhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccC--CHHHHHHHH
Q 039449 184 RAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLP--DLVAVKEFL 246 (253)
Q Consensus 184 ~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~--~l~el~~~l 246 (253)
.++ ++++++++|||+. ||+.|++.||++.++ +. .+.+....+++++ |+++++++|
T Consensus 153 ~~~-~~~~~~i~iGDs~-nDi~m~~~ag~~va~-na-----~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 153 IEG-INLEDTVAVGDGA-NDISMFKKAGLKIAF-CA-----KPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp HHT-CCGGGEEEEESSG-GGHHHHHHCSEEEEE-SC-----CHHHHTTCSEEECSSCGGGGGGGC
T ss_pred Hhc-ccccceEEecCCc-ChHHHHHHCCCCEEE-CC-----CHHHHHhCCEEEcCCCHHHHHHHh
Confidence 999 9999999999999 999999999998776 42 2445566777777 677877665
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.80 E-value=4.8e-20 Score=139.16 Aligned_cols=109 Identities=18% Similarity=0.144 Sum_probs=74.6
Q ss_pred CCEEEEEeCCCcchhhhhhhhcC---CCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhh
Q 039449 130 GLIVGIISNAEYRYQDVILPALG---VNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVP 206 (253)
Q Consensus 130 g~~~~i~s~~~~~~~~~~l~~~g---l~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~ 206 (253)
+..+.+.+|.+.......-...+ +.. ++...........+||++.++..+++++| +++++|+||||++.+||.+
T Consensus 137 ~~~~~i~~n~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~KP~~~~~~~~~~~~g-i~~~~~l~IGD~~~~DI~~ 213 (253)
T d1yv9a1 137 KGALFIGTNPDKNIPTERGLLPGAGSVVT--FVETATQTKPVYIGKPKAIIMERAIAHLG-VEKEQVIMVGDNYETDIQS 213 (253)
T ss_dssp TTCEEEESCCCSEEEETTEEEECHHHHHH--HHHHHHTCCCEECSTTSHHHHHHHHHHHC-SCGGGEEEEESCTTTHHHH
T ss_pred cccceeeecCCccccccCceeeecccccc--cccccccceeeeecccchhHHHHHHHHhC-CCccceEEecCChHHHHHH
Confidence 34666788776533221111111 111 23333344455668999999999999999 9999999999997569999
Q ss_pred hhhcCCeEEEEcCCCCCChhhh---hhcCCcccCCHHHH
Q 039449 207 AKSVGMHALLVDRFKTPDAKEW---RKSGAIVLPDLVAV 242 (253)
Q Consensus 207 a~~~G~~~i~~~~~~~~~~~~~---~~~~~~~i~~l~el 242 (253)
|+++|+++|+|.+ |....+.. ...++++++|+.|+
T Consensus 214 a~~aG~~si~V~~-G~~~~~~~~~~~~~Pd~vi~sl~e~ 251 (253)
T d1yv9a1 214 GIQNGIDSLLVTS-GFTPKSAVPTLPTPPTYVVDSLDEW 251 (253)
T ss_dssp HHHHTCEEEEETT-SSSCSSSTTTCSSCCSEEESSGGGC
T ss_pred HHHCCCCEEEECC-CCCCHHHHHhcCCCCCEEECCHHHc
Confidence 9999999999983 43322222 23357999999986
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.72 E-value=1.3e-16 Score=116.04 Aligned_cols=194 Identities=13% Similarity=0.129 Sum_probs=125.3
Q ss_pred ceEEEEecCCceeccCCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHHHHHH
Q 039449 7 LRCITVDVTGTLLAYKGELGDYYCMAAKSVGLPCPDYKRVHEGFKLAYKEMAKNYPCFGFAAKMPNIVWWKTCVRDSFVR 86 (253)
Q Consensus 7 ~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (253)
+|+|+||+||||++ +.|....+..|+.... ..|+ +.+...++....+. .+..
T Consensus 2 mkli~fDlDGTLl~------e~~~~~a~~~Gi~~~~--------------------~tgR-~~~~~~~~~~~~v~-ll~~ 53 (206)
T d1rkua_ 2 MEIACLDLEGVLVP------EIWIAFAEKTGIDALK--------------------ATTR-DIPDYDVLMKQRLR-ILDE 53 (206)
T ss_dssp CEEEEEESBTTTBC------CHHHHHHHHHTCGGGG--------------------CCTT-TCCCHHHHHHHHHH-HHHH
T ss_pred cEEEEEcCccchHH------HHHHHHHHHcCCHHHH--------------------HHCC-CCCCHHHHHHHHHH-HHHh
Confidence 68999999999998 3466667777864210 1121 22333333322221 2222
Q ss_pred cCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeecc
Q 039449 87 AGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSG 166 (253)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~ 166 (253)
.+.. ...+. ... ......++....+..++ .+.+.+++|.+...........++... .+...+...
T Consensus 54 ~~~~--~~~~~-------~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~--~~~~~l~~~ 118 (206)
T d1rkua_ 54 HGLK--LGDIQ-------EVI---ATLKPLEGAVEFVDWLR-ERFQVVILSDTFYEFSQPLMRQLGFPT--LLCHKLEID 118 (206)
T ss_dssp TTCC--HHHHH-------HHH---TTCCCCTTHHHHHHHHH-TTSEEEEEEEEEHHHHHHHHHHTTCCC--EEEEEEEEC
T ss_pred CCCc--eehhh-------hhh---hhccccchHHHHHHHhh-cCceEEEeccCchHHHHHHHHHhCCch--hhcceeeee
Confidence 2221 11111 111 12366788888887765 668999999998888888888888876 444333322
Q ss_pred ccC----ccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCC-cccCCHHH
Q 039449 167 LEG----VEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGA-IVLPDLVA 241 (253)
Q Consensus 167 ~~~----~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~-~~i~~l~e 241 (253)
... ...+++......++.++ ++++++++|||+. ||+.|.+.||++.++ +. . .+...+.++ ....+.++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~-i~~~eviaiGDg~-NDi~Ml~~Ag~gIAm-na-~---~~v~~~~~~~~~~~~~~d 191 (206)
T d1rkua_ 119 DSDRVVGYQLRQKDPKRQSVIAFK-SLYYRVIAAGDSY-NDTTMLSEAHAGILF-HA-P---ENVIREFPQFPAVHTYED 191 (206)
T ss_dssp TTSCEEEEECCSSSHHHHHHHHHH-HTTCEEEEEECSS-TTHHHHHHSSEEEEE-SC-C---HHHHHHCTTSCEECSHHH
T ss_pred cccccccccccchhhHHHHHHHhc-ccccceEEecCCc-cCHHHHHhCCccEEE-CC-C---HHHHHhCCCceeecCHHH
Confidence 221 22556667788899999 9999999999999 999999999999888 52 2 222334444 46789999
Q ss_pred HHHHHhhhh
Q 039449 242 VKEFLTSEI 250 (253)
Q Consensus 242 l~~~l~~~~ 250 (253)
+.+.|.+..
T Consensus 192 ~~~~~~~~~ 200 (206)
T d1rkua_ 192 LKREFLKAS 200 (206)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHh
Confidence 998776544
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=99.70 E-value=7.2e-18 Score=116.73 Aligned_cols=102 Identities=12% Similarity=0.024 Sum_probs=74.6
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcC--------CCCCcceeEeeeccccCccCCCHHHHHHHHHHh
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALG--------VNQGTEWDFGVFSGLEGVEKPDPRIYEIALERA 185 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~g--------l~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~ 185 (253)
.++|++.++|+.|+++|++++++||.+....+...+++. +.. .++. .......+..+|+.......+.++
T Consensus 36 ~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~d~~~k~~~l~~~ 113 (149)
T d1ltqa1 36 VINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAG-VPLV-MQCQREQGDTRKDDVVKEEIFWKH 113 (149)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTC-CCCS-EEEECCTTCCSCHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCC-CcEE-EeecccccccCCchHHHHHHHHHh
Confidence 678999999999999999999999997654333333221 111 1222 234444455567778888888887
Q ss_pred CCCCCCc-eEEEcCCcccchhhhhhcCCeEEEEcC
Q 039449 186 GNIAPEE-ALHIGDSFRKDYVPAKSVGMHALLVDR 219 (253)
Q Consensus 186 ~~~~~~~-~~~iGD~~~~Di~~a~~~G~~~i~~~~ 219 (253)
. .+..+ +++|||++ .|+++|+++|++++.|.+
T Consensus 114 ~-~~~~~i~~~igD~~-~dv~a~~~~Gi~~~~V~~ 146 (149)
T d1ltqa1 114 I-APHFDVKLAIDDRT-QVVEMWRRIGVECWQVAS 146 (149)
T ss_dssp T-TTTCEEEEEEECCH-HHHHHHHHTTCCEEECSC
T ss_pred c-cCCCceEEEEcCCH-HHHHHHHHCCCcEEEeCC
Confidence 6 66555 57789999 899999999999999983
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.70 E-value=8.7e-18 Score=133.44 Aligned_cols=133 Identities=19% Similarity=0.234 Sum_probs=108.1
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeE--eeeccc-----------cCccCCCHHHHHH
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDF--GVFSGL-----------EGVEKPDPRIYEI 180 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~--~~~~~~-----------~~~~kp~~~~~~~ 180 (253)
+|.|++.++|+.|+++|++++++||.....++.+++.+|+.+ +|+. +++.++ ....||+|..+..
T Consensus 215 ~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~--~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~ 292 (380)
T d1qyia_ 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLP--YFEADFIATASDVLEAENMYPQARPLGKPNPFSYIA 292 (380)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGG--GSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHH
T ss_pred cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcc--cCCcceEEecchhhhhhhhccccccccCCChHHHHH
Confidence 456699999999999999999999999999999999999998 6653 333322 2456999999998
Q ss_pred HHHHh--------------CCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCC---hhhhhh-cCCcccCCHHHH
Q 039449 181 ALERA--------------GNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPD---AKEWRK-SGAIVLPDLVAV 242 (253)
Q Consensus 181 ~~~~~--------------~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~---~~~~~~-~~~~~i~~l~el 242 (253)
++..+ + .++++|+||||+. ||+.+|+++|+++|+|. +|... .+++.. ..+++++|+.+|
T Consensus 293 ~~~~~~~~~~~k~~iv~~~~-~~~~~~~~vGD~~-~D~~aak~Ag~~~Igv~-~G~~g~~~~~el~~~~AD~ii~~~~el 369 (380)
T d1qyia_ 293 ALYGNNRDKYESYINKQDNI-VNKDDVFIVGDSL-ADLLSAQKIGATFIGTL-TGLKGKDAAGELEAHHADYVINHLGEL 369 (380)
T ss_dssp HHHCCCGGGHHHHHHCCTTC-SCTTTEEEEESSH-HHHHHHHHHTCEEEEES-CBTTBGGGHHHHHHTTCSEEESSGGGH
T ss_pred HHHHcCCCHHHHHHHHHHhC-CCCCeEEEECCCH-HHHHHHHHCCCCEEEEe-cCCCCcccHHHHHhCCCCEEECCHHHH
Confidence 87654 4 6788999999999 99999999999999998 34332 233333 457999999999
Q ss_pred HHHHhhhhh
Q 039449 243 KEFLTSEIS 251 (253)
Q Consensus 243 ~~~l~~~~~ 251 (253)
..+|.+.++
T Consensus 370 ~~il~~l~~ 378 (380)
T d1qyia_ 370 RGVLDNLLE 378 (380)
T ss_dssp HHHHSCTTT
T ss_pred HHHHHHHHh
Confidence 999987764
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.56 E-value=5.9e-15 Score=109.03 Aligned_cols=75 Identities=23% Similarity=0.169 Sum_probs=57.1
Q ss_pred CccCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCH--HHHHHHH
Q 039449 169 GVEKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDL--VAVKEFL 246 (253)
Q Consensus 169 ~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l--~el~~~l 246 (253)
....+|+.+++.++++++ ++++++++|||+. ||+.|++.+|.+.++-+. .+.+....++++++. +.+.+.+
T Consensus 148 ~~~~~K~~al~~l~~~~~-i~~~~~~~iGD~~-NDi~ml~~ag~~vav~na-----~~~~k~~A~~v~~~~~~~gv~~~i 220 (230)
T d1wr8a_ 148 KPWINKGSGIEKASEFLG-IKPKEVAHVGDGE-NDLDAFKVVGYKVAVAQA-----PKILKENADYVTKKEYGEGGAEAI 220 (230)
T ss_dssp CTTCCHHHHHHHHHHHHT-SCGGGEEEEECSG-GGHHHHHHSSEEEECTTS-----CHHHHTTCSEECSSCHHHHHHHHH
T ss_pred eCCcCcchhhcccccccc-cchhheeeeecCc-cHHHHHHHCCeEEEECCC-----CHHHHHhCCEEECCCCcCHHHHHH
Confidence 455788999999999999 9999999999999 999999999987655331 244566677777653 3455555
Q ss_pred hhhh
Q 039449 247 TSEI 250 (253)
Q Consensus 247 ~~~~ 250 (253)
.+.+
T Consensus 221 ~~~l 224 (230)
T d1wr8a_ 221 YHIL 224 (230)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.51 E-value=2e-14 Score=106.02 Aligned_cols=70 Identities=14% Similarity=0.033 Sum_probs=54.9
Q ss_pred CCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccC--CHHHHHHHHhh
Q 039449 172 KPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLP--DLVAVKEFLTS 248 (253)
Q Consensus 172 kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~--~l~el~~~l~~ 248 (253)
..|..+++.++++++ ++++++++|||+. ||+.|++.+|...++-+. .+.+.+..+++++ +.+.+.+++++
T Consensus 150 ~~K~~ai~~l~~~~~-i~~~~v~~~GDs~-nD~~m~~~a~~~vav~na-----~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 150 EDKAFAVNKLKEMYS-LEYDEILVIGDSN-NDMPMFQLPVRKACPANA-----TDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp CSHHHHHHHHHHHTT-CCGGGEEEECCSG-GGHHHHTSSSEEEECTTS-----CHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred cchHHHHHHHhhhhc-cchhheeeecCCc-chHHHHHHCCeEEEECCC-----cHHHHHhCCEEECCCCcCHHHHHHHH
Confidence 456889999999999 9999999999999 999999999987655331 3445566676664 45677777765
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.45 E-value=2.7e-13 Score=102.60 Aligned_cols=70 Identities=17% Similarity=0.155 Sum_probs=55.0
Q ss_pred CCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHH--HHHHHhhh
Q 039449 173 PDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVA--VKEFLTSE 249 (253)
Q Consensus 173 p~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~e--l~~~l~~~ 249 (253)
.|..+++.+++.++ ++++++++|||+. ||+.|.+.+|...++-+ ..+++.....+++++-.+ +.+.|++.
T Consensus 197 ~K~~al~~l~~~~~-i~~~~ii~~GD~~-ND~~ml~~~~~~~am~n-----a~~~lk~~a~~i~~~~~~~Gv~~~l~~~ 268 (271)
T d1rkqa_ 197 NKGTGVKSLADVLG-IKPEEIMAIGDQE-NDIAMIEYAGVGVAVDN-----AIPSVKEVANFVTKSNLEDGVAFAIEKY 268 (271)
T ss_dssp SHHHHHHHHHHHHT-CCGGGEEEEECSG-GGHHHHHHSSEEEECTT-----SCHHHHHHCSEECCCTTTTHHHHHHHHH
T ss_pred Ccccccceehhhcc-cchhcEEEEeCcH-hHHHHHHhCCcEEEeCC-----CCHHHHHhCCEEcCCCCcChHHHHHHHH
Confidence 46789999999999 9999999999999 99999999998876644 235556666777766554 66666553
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.42 E-value=4.7e-13 Score=101.96 Aligned_cols=70 Identities=14% Similarity=0.147 Sum_probs=56.0
Q ss_pred CCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHH--HHHHHhhh
Q 039449 173 PDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVA--VKEFLTSE 249 (253)
Q Consensus 173 p~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~e--l~~~l~~~ 249 (253)
.|..+++.+++.+| ++++++++|||+. ||+.|.+.+|...++-+. .+++.....+++++.++ +..+|++.
T Consensus 213 ~K~~ai~~l~~~~g-i~~~~vi~~GD~~-ND~~Ml~~a~~svam~na-----~~~~k~~A~~v~~~~~~~Gv~~~l~~l 284 (285)
T d1nrwa_ 213 SKGQALKRLAKQLN-IPLEETAAVGDSL-NDKSMLEAAGKGVAMGNA-----REDIKSIADAVTLTNDEHGVAHMMKHL 284 (285)
T ss_dssp SHHHHHHHHHHHTT-CCGGGEEEEESSG-GGHHHHHHSSEEEECTTC-----CHHHHHHCSEECCCGGGTHHHHHHHHT
T ss_pred hhhhHHHHHHhhcc-cCcccEEEEeCCH-HHHHHHHhCCeEEEeCCC-----CHHHHHhCCEEcCCCCccHHHHHHHHh
Confidence 57899999999999 9999999999999 999999999988766542 24555667777776553 66766654
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.38 E-value=5.3e-13 Score=100.83 Aligned_cols=72 Identities=15% Similarity=0.113 Sum_probs=57.8
Q ss_pred CCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHH--HHHHHhhh
Q 039449 172 KPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVA--VKEFLTSE 249 (253)
Q Consensus 172 kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~e--l~~~l~~~ 249 (253)
-.|..+++.+++++| ++++++++|||+. ||+.|.+.+|.+.++-+. .+.+.+...+++++.++ +...|++.
T Consensus 189 ~sK~~al~~l~~~lg-i~~~~vi~~GD~~-ND~~Ml~~ag~~vam~Na-----~~~lk~~A~~v~~~~~~~Gva~~i~~~ 261 (269)
T d1rlma_ 189 LHKANGISRLLKRWD-LSPQNVVAIGDSG-NDAEMLKMARYSFAMGNA-----AENIKQIARYATDDNNHEGALNVIQAV 261 (269)
T ss_dssp CSHHHHHHHHHHHHT-CCGGGEEEEECSG-GGHHHHHHCSEEEECTTC-----CHHHHHHCSEECCCGGGTHHHHHHHHH
T ss_pred hHHHHHHHHHhhhhc-cccccEEEEcCCc-chHHHHHhCCeEEEeCCC-----CHHHHHhCCEEcCCCCccHHHHHHHHH
Confidence 347889999999999 9999999999999 999999999999887552 34556667778887664 66666655
Q ss_pred h
Q 039449 250 I 250 (253)
Q Consensus 250 ~ 250 (253)
+
T Consensus 262 l 262 (269)
T d1rlma_ 262 L 262 (269)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.34 E-value=1.5e-12 Score=92.15 Aligned_cols=97 Identities=23% Similarity=0.261 Sum_probs=74.1
Q ss_pred cCCChHHHHHHHHHcCCEEEEEeCCCc------------chhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHH
Q 039449 115 VFPDSQPFLRWAREKGLIVGIISNAEY------------RYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIAL 182 (253)
Q Consensus 115 ~~~~~~~~l~~l~~~g~~~~i~s~~~~------------~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~ 182 (253)
++|++.+.|+.|.+.|+.++|+||.+. ...+.+++.++... ...+.......+||++-++..++
T Consensus 51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~~~l~~~~----~i~~~~~~~~~RKP~~GM~~~~~ 126 (195)
T d1yj5a1 51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVPF----QVLVATHAGLNRKPVSGMWDHLQ 126 (195)
T ss_dssp SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHHHHHTSCC----EEEEECSSSSSSTTSTHHHHHHH
T ss_pred ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHHHHcCCCc----cEEEecCccccCCCccHHHHHHH
Confidence 469999999999999999999999732 12445666676653 22223334456899999999999
Q ss_pred HHhC---CCCCCceEEEcCCc----------------ccchhhhhhcCCeEE
Q 039449 183 ERAG---NIAPEEALHIGDSF----------------RKDYVPAKSVGMHAL 215 (253)
Q Consensus 183 ~~~~---~~~~~~~~~iGD~~----------------~~Di~~a~~~G~~~i 215 (253)
++++ .++.++++||||.. .+|+..|.++|++..
T Consensus 127 ~~~n~~~~id~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD~~fA~N~gikF~ 178 (195)
T d1yj5a1 127 EQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFA 178 (195)
T ss_dssp HTSSSSCCCCGGGCEEECSCCCBCTTSBTTBCSCCSCCHHHHHHHHHTCCEE
T ss_pred HHhcccccCCcCceEEEeCccCccccccccccccCcchhHHHHHHHCCCccc
Confidence 9873 17889999999942 179999999999964
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.30 E-value=1.6e-12 Score=98.06 Aligned_cols=76 Identities=17% Similarity=0.208 Sum_probs=61.1
Q ss_pred cCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHH--HHHHHhh
Q 039449 171 EKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVA--VKEFLTS 248 (253)
Q Consensus 171 ~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~e--l~~~l~~ 248 (253)
.-.|..+++.+++.++ ++++++++|||+. ||+.|.+.+|..+++-+. .+++....++++++..| +..+|++
T Consensus 188 ~~~K~~ai~~l~~~~~-i~~~~vva~GD~~-ND~~ml~~~~~sva~~na-----~~~~k~~A~~i~~~~~~~Gva~~i~~ 260 (267)
T d1nf2a_ 188 NVDKGKALRFLRERMN-WKKEEIVVFGDNE-NDLFMFEEAGLRVAMENA-----IEKVKEASDIVTLTNNDSGVSYVLER 260 (267)
T ss_dssp TCCHHHHHHHHHHHHT-CCGGGEEEEECSH-HHHHHHTTCSEEEECTTS-----CHHHHHHCSEECCCTTTTHHHHHHTT
T ss_pred CCchhHHHHHHHHhhc-cCcccEEEEcCCc-chHHHHHhCCcEEEeCCC-----CHHHHHhCCEEcCCCCccHHHHHHHH
Confidence 3567899999999999 9999999999999 999999999987665332 35566677778887665 8888888
Q ss_pred hhhcC
Q 039449 249 EISAC 253 (253)
Q Consensus 249 ~~~~~ 253 (253)
.+.-|
T Consensus 261 ll~~~ 265 (267)
T d1nf2a_ 261 ISTDC 265 (267)
T ss_dssp BCBSS
T ss_pred HHhcc
Confidence 76543
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=99.29 E-value=1.3e-11 Score=87.48 Aligned_cols=97 Identities=14% Similarity=0.141 Sum_probs=67.7
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcch---hhhhh-hhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCC
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRY---QDVIL-PALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIA 189 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~---~~~~l-~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~ 189 (253)
.+.||+.+++++++++|++++.+||..... +...| +.+|+..... ..++..... ..|.. -...+++++ +
T Consensus 86 ~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~-~~vll~~~~-~~K~~---rr~~Ik~y~-I- 158 (209)
T d2b82a1 86 IPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNM-NPVIFAGDK-PGQNT---KSQWLQDKN-I- 158 (209)
T ss_dssp EECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTB-CCCEECCCC-TTCCC---SHHHHHHTT-E-
T ss_pred CcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccc-cceEeeCCC-CCchH---HHHHHHHcC-e-
Confidence 567899999999999999999999987654 23334 4578754111 222333222 23322 223346677 5
Q ss_pred CCceEEEcCCcccchhhhhhcCCeEEEEcCCC
Q 039449 190 PEEALHIGDSFRKDYVPAKSVGMHALLVDRFK 221 (253)
Q Consensus 190 ~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~ 221 (253)
++++||+. +|+.+|.++|+.+|-+.+..
T Consensus 159 ---~l~~GD~l-~Df~aA~eagi~~iRi~r~~ 186 (209)
T d2b82a1 159 ---RIFYGDSD-NDITAARDVGARGIRILRAS 186 (209)
T ss_dssp ---EEEEESSH-HHHHHHHHTTCEEEECCCCT
T ss_pred ---EEEecCCH-HHHhHHHHcCCCceEeeccC
Confidence 79999999 99999999999999987533
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.26 E-value=8.4e-12 Score=94.11 Aligned_cols=98 Identities=15% Similarity=0.015 Sum_probs=67.3
Q ss_pred CccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCC--cceeEeeeccccCc----------cCCCHHHHHH
Q 039449 113 YTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQG--TEWDFGVFSGLEGV----------EKPDPRIYEI 180 (253)
Q Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~--~~f~~~~~~~~~~~----------~kp~~~~~~~ 180 (253)
+.+.||+.++++.|+++|++++|+|++....++.+++++|+... ..+...+..+..+. ...+......
T Consensus 134 i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~~~~~ 213 (291)
T d2bdua1 134 VMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGALK 213 (291)
T ss_dssp CCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHHT
T ss_pred CCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeCCeeEeeccCCccccccCcchhhh
Confidence 57899999999999999999999999999999999999988641 01222111111111 1112233333
Q ss_pred HHHHhC-CCCCCceEEEcCCcccchhhhhhcC
Q 039449 181 ALERAG-NIAPEEALHIGDSFRKDYVPAKSVG 211 (253)
Q Consensus 181 ~~~~~~-~~~~~~~~~iGD~~~~Di~~a~~~G 211 (253)
....+. .-+.+++++|||+. +|+.||..+.
T Consensus 214 ~~~~~~~~~~~~~vI~iGDs~-~Dl~Ma~g~~ 244 (291)
T d2bdua1 214 NTDYFSQLKDNSNIILLGDSQ-GDLRMADGVA 244 (291)
T ss_dssp THHHHHHTTTCCEEEEEESSS-GGGGTTTTCS
T ss_pred hHHHHhccCCcCcEEEEeCCH-hHHHHHhCCc
Confidence 333222 03567899999999 9999998764
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.25 E-value=2.3e-11 Score=90.07 Aligned_cols=66 Identities=18% Similarity=0.237 Sum_probs=50.2
Q ss_pred CCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHHHHHHh
Q 039449 172 KPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKEFLT 247 (253)
Q Consensus 172 kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~~~l~ 247 (253)
-.|..++..+++.++.++++++++|||+. ||+.|.+.+|...++-+. .. ...-.+.++.|+.++++
T Consensus 178 ~~K~~al~~l~~~~~~~~~~~~~a~GD~~-ND~~Ml~~a~~~va~~Na-~~--------~~~~~~~~i~~~~~~i~ 243 (243)
T d1wzca1 178 SDKGKAAKILLDFYKRLGQIESYAVGDSY-NDFPMFEVVDKVFIVGSL-KH--------KKAQNVSSIIDVLEVIK 243 (243)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSG-GGHHHHTTSSEEEEESSC-CC--------TTCEEESCHHHHHHHHT
T ss_pred hccHHHHHHHHHHhcCCCcccEEEEcCCH-hHHHHHHcCCcEEEeCCC-Ch--------HHHhhhhHHHHHHHhhC
Confidence 45778999999998328889999999999 999999999988877552 11 11235777877777663
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=99.19 E-value=3.9e-11 Score=88.06 Aligned_cols=43 Identities=9% Similarity=0.074 Sum_probs=34.7
Q ss_pred CCCHHHHHHHHH---HhCCCCCCceEEEcCCcccchhhhhhcCCeEEE
Q 039449 172 KPDPRIYEIALE---RAGNIAPEEALHIGDSFRKDYVPAKSVGMHALL 216 (253)
Q Consensus 172 kp~~~~~~~~~~---~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~ 216 (253)
..|..+.+.+++ +++ ++++++++|||+. ||+.|.+.+|...+.
T Consensus 183 ~~K~~~~~~l~~~~~~l~-i~~~~~iafGD~~-NDl~Ml~~a~~~vaV 228 (232)
T d1xvia_ 183 AGKDQAANWIIATYQQLS-GKRPTTLGLGDGP-NDAPLLEVMDYAVIV 228 (232)
T ss_dssp CCHHHHHHHHHHHHHHHH-SSCCEEEEEESSG-GGHHHHHTSSEEEEC
T ss_pred chHHHHHHHHHHHHHHcC-CChhcEEEEcCCH-hHHHHHHhCCeEEEE
Confidence 455666666655 568 9999999999999 999999999986543
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.19 E-value=3.8e-11 Score=90.02 Aligned_cols=70 Identities=11% Similarity=0.186 Sum_probs=54.1
Q ss_pred CCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHH--HHHHHHhh
Q 039449 172 KPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLV--AVKEFLTS 248 (253)
Q Consensus 172 kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~--el~~~l~~ 248 (253)
-.|..+++.++++++ ++++++++|||+. ||+.|.+.+|..+++-+. .+.+.+..++++++-. .+...|++
T Consensus 185 ~sK~~al~~l~~~~~-i~~~~~~a~GD~~-ND~~Ml~~a~~svav~na-----~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 185 DTKQKGIDEIIRHFG-IKLEETMSFGDGG-NDISMLRHAAIGVAMGQA-----KEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp CSHHHHHHHHHHHHT-CCGGGEEEEECSG-GGHHHHHHSSEEEECTTS-----CHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred CCHHHHHHHHHHhcc-ccHhheeEecCCc-ccHHHHHhCCeEEEeCCC-----CHHHHHhCCEEeCCCCccHHHHHHHH
Confidence 357889999999999 9999999999999 999999999997655432 3445556667777644 35666654
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.02 E-value=1.2e-10 Score=88.21 Aligned_cols=73 Identities=15% Similarity=0.144 Sum_probs=54.9
Q ss_pred cCCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCC-H-HH-HHHHHh
Q 039449 171 EKPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPD-L-VA-VKEFLT 247 (253)
Q Consensus 171 ~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~-l-~e-l~~~l~ 247 (253)
...|..++..+++.++ ++++++++|||+. ||+.|.+.+|.++++-+. .+.+....++++++ - +. +..+++
T Consensus 205 ~~~K~~~l~~l~~~~~-i~~~~vi~~GD~~-ND~~Ml~~a~~~va~~na-----~~~~k~~a~~v~~~~~~~g~v~~~l~ 277 (283)
T d2b30a1 205 GHDKYTGINYLLKHYN-ISNDQVLVVGDAE-NDIAMLSNFKYSFAVANA-----TDSAKSHAKCVLPVSHREGAVAYLLK 277 (283)
T ss_dssp TCCHHHHHHHHHHHTT-CCGGGEEEEECSG-GGHHHHHSCSEEEECTTC-----CHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred cchhHHHHHHHhhhcc-cccceEEEecCCh-hhHHHHHhCCcEEEeCCC-----CHHHHHhCCEEECCcCCCcHHHHHHH
Confidence 3567799999999999 9999999999999 999999999988765431 24555666666643 2 22 566666
Q ss_pred hhh
Q 039449 248 SEI 250 (253)
Q Consensus 248 ~~~ 250 (253)
+.+
T Consensus 278 ~~~ 280 (283)
T d2b30a1 278 KVF 280 (283)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.93 E-value=1.8e-09 Score=71.70 Aligned_cols=113 Identities=20% Similarity=0.285 Sum_probs=81.9
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCce
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEA 193 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 193 (253)
++.|++.+.++.|++.|++++++|+.....+..+.+.+|++. +++.. .|+-.....+.+. - ...+
T Consensus 21 ~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~-------v~~~~------~p~~k~~~v~~~q-~-~~~v 85 (135)
T d2b8ea1 21 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL-------VIAEV------LPHQKSEEVKKLQ-A-KEVV 85 (135)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-------EECSC------CHHHHHHHHHHHT-T-TSCE
T ss_pred CCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhh-------hcccc------chhHHHHHHHHHH-c-CCEE
Confidence 577999999999999999999999999999999999999976 33222 2334445666666 3 3689
Q ss_pred EEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCccc--CCHHHHHHHHh
Q 039449 194 LHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVL--PDLVAVKEFLT 247 (253)
Q Consensus 194 ~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i--~~l~el~~~l~ 247 (253)
.|+||+. ||..+.+.+++..++-+. . .......+.++ +++..|...|+
T Consensus 86 ~~vGDg~-nD~~aL~~Advgia~~~~--~---~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 86 AFVGDGI-NDAPALAQADLGIAVGSG--S---DVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp EEEECSS-SSHHHHHHSSEEEEECCC-------------SEEESSCCTHHHHHHHC
T ss_pred EEEeCCC-CcHHHHHhCCeeeecCcc--C---HHHHHhCCEEEECCCHHHHHHHhC
Confidence 9999999 999999999988665432 1 11123455444 57888887663
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.93 E-value=4e-09 Score=73.55 Aligned_cols=108 Identities=15% Similarity=0.185 Sum_probs=85.3
Q ss_pred HHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEEEcCCcc
Q 039449 122 FLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALHIGDSFR 201 (253)
Q Consensus 122 ~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~ 201 (253)
.+..|++.|+.++++|......+....+.+++.. +.. ..+++...++.++++++ +++++|+||||..
T Consensus 40 gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~-------~~~----~~~~K~~~l~~~~~~~~-i~~~~v~~vGDd~- 106 (177)
T d1k1ea_ 40 GIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL-------FFL----GKLEKETACFDLMKQAG-VTAEQTAYIGDDS- 106 (177)
T ss_dssp HHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE-------EEE----SCSCHHHHHHHHHHHHT-CCGGGEEEEECSG-
T ss_pred HHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc-------ccc----ccccHHHHHHHHHHHhc-CCcceeEEecCCc-
Confidence 4677888999999999999998988899988865 111 23566788999999999 9999999999999
Q ss_pred cchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCC------HHHHHHHHh
Q 039449 202 KDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPD------LVAVKEFLT 247 (253)
Q Consensus 202 ~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~------l~el~~~l~ 247 (253)
||+.+.+.+|+..+..+. .+......+++.++ +.|+.++|.
T Consensus 107 nDl~~l~~~g~siap~nA-----~~~vk~~A~~Vt~~~GG~GavrE~~e~il 153 (177)
T d1k1ea_ 107 VDLPAFAACGTSFAVADA-----PIYVKNAVDHVLSTHGGKGAFREMSDMIL 153 (177)
T ss_dssp GGHHHHHHSSEEEECTTS-----CHHHHTTSSEECSSCTTTTHHHHHHHHHH
T ss_pred cHHHHHhhCCeEEEcCCc-----cHHHHHhCCEEeCCCCCCchHHHHHHHHH
Confidence 999999999988776552 34445566666665 667766664
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.82 E-value=3.4e-08 Score=70.24 Aligned_cols=113 Identities=9% Similarity=-0.071 Sum_probs=70.6
Q ss_pred CCccCCChHHHHHHHHHcC-CEEEEEeCCCcch---hh---hhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHH
Q 039449 112 PYTVFPDSQPFLRWAREKG-LIVGIISNAEYRY---QD---VILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALER 184 (253)
Q Consensus 112 ~~~~~~~~~~~l~~l~~~g-~~~~i~s~~~~~~---~~---~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~ 184 (253)
.++++||+.+++++|++.| +.+.++|...... .. ..++...... ....++++.+ |. .
T Consensus 72 ~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~~~~~~~~~k~~Wl~~~~~~~--~~~~~~~t~~----K~----------~ 135 (195)
T d1q92a_ 72 ELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFGPD--FLEQIVLTRD----KT----------V 135 (195)
T ss_dssp TCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHCGG--GGGGEEECSC----ST----------T
T ss_pred hCCcccCHHHHHHHHhhccCccceEEccccccCcchHHHHHHHHHHhcCCC--CccEEEEccc----cc----------e
Confidence 3588999999999999865 4678888876442 11 2233332111 1223333322 21 2
Q ss_pred hCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhh-hcCCcccCCHHHHHHHHhhh
Q 039449 185 AGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWR-KSGAIVLPDLVAVKEFLTSE 249 (253)
Q Consensus 185 ~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~-~~~~~~i~~l~el~~~l~~~ 249 (253)
+. .+ ++|+|++ ..+..+.++|+++++.+.+. + +.+. +....++.++.|+.+.+.+.
T Consensus 136 ~~-~d----~lIDD~p-~n~~~~~~~g~~~il~~~~~-N--~~~~~~~~~~Rv~~W~e~~~~il~~ 192 (195)
T d1q92a_ 136 VS-AD----LLIDDRP-DITGAEPTPSWEHVLFTACH-N--QHLQLQPPRRRLHSWADDWKAILDS 192 (195)
T ss_dssp SC-CS----EEEESCS-CCCCSCSSCSSEEEEECCTT-T--TTCCCCTTCEEECCTTSCHHHHHHT
T ss_pred ec-Ce----EEecCcH-HHHHHHhcCCCeEEEECCCc-c--cCCCCCCCceeeCCHHHHHHHHHhc
Confidence 22 22 8999999 79999999999999987322 1 1111 22347899999987666543
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.79 E-value=8.4e-09 Score=76.13 Aligned_cols=45 Identities=13% Similarity=0.137 Sum_probs=40.0
Q ss_pred CCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEc
Q 039449 172 KPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVD 218 (253)
Q Consensus 172 kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~ 218 (253)
..|..+++.+++.++ ++++++++|||+. ||+.|.+.+|..+++-+
T Consensus 161 ~~K~~a~~~l~~~~g-i~~~~~v~~GD~~-ND~~Ml~~~~~~vav~n 205 (244)
T d1s2oa1 161 SNKGNATQYLQQHLA-MEPSQTLVCGDSG-NDIGLFETSARGVIVRN 205 (244)
T ss_dssp CSHHHHHHHHHHHTT-CCGGGEEEEECSG-GGHHHHTSSSEEEECTT
T ss_pred cchhHHHHHHHHhcc-CChhhEEEEcCCC-CCHHHHhhCCcEEEeCC
Confidence 457889999999999 9999999999999 99999999997766544
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.68 E-value=3e-08 Score=72.07 Aligned_cols=64 Identities=9% Similarity=0.020 Sum_probs=44.3
Q ss_pred CCCHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCcccCCHHHHHHHHhhh
Q 039449 172 KPDPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVLPDLVAVKEFLTSE 249 (253)
Q Consensus 172 kp~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i~~l~el~~~l~~~ 249 (253)
-.|..+++.++ +.+++++|||+. ||+.|.+.+|.......+.. +....+++++.+|+..+|+.+
T Consensus 158 ~~Kg~al~~l~------~~~~~i~~GDs~-ND~~Mf~~~~~~~av~~g~~-------~~~A~~~~~~~~ev~~~l~~l 221 (229)
T d1u02a_ 158 VNKGSAIRSVR------GERPAIIAGDDA-TDEAAFEANDDALTIKVGEG-------ETHAKFHVADYIEMRKILKFI 221 (229)
T ss_dssp CCHHHHHHHHH------TTSCEEEEESSH-HHHHHHHTTTTSEEEEESSS-------CCCCSEEESSHHHHHHHHHHH
T ss_pred CCHHHHHHHHh------ccccceeecCCC-ChHHHHhccCCeEEEEeCCC-------CccCeEEcCCHHHHHHHHHHH
Confidence 34455555543 246899999999 99999999987665544311 123557889999987777653
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.50 E-value=3.5e-07 Score=62.91 Aligned_cols=126 Identities=13% Similarity=0.080 Sum_probs=84.9
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEe----eeccccC----------------ccCC
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFG----VFSGLEG----------------VEKP 173 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~----~~~~~~~----------------~~kp 173 (253)
++.|++.+.++.|++.|++++++|+.....+..+.+.+|+.. ....+ +...+.. ...-
T Consensus 20 p~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~ 97 (168)
T d1wpga2 20 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFG--ENEEVADRAYTGREFDDLPLAEQREACRRACCFARV 97 (168)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSC--TTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESC
T ss_pred CCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCC--CccccccccccccccchhhHHHHhhhhhhhhhhhcc
Confidence 567899999999999999999999999999999999999864 11111 1111100 0122
Q ss_pred CHHHHHHHHHHhCCCCCCceEEEcCCcccchhhhhhcCCeEEEEcCCCCCChhhhhhcCCccc--CCHHHHHHHHhh
Q 039449 174 DPRIYEIALERAGNIAPEEALHIGDSFRKDYVPAKSVGMHALLVDRFKTPDAKEWRKSGAIVL--PDLVAVKEFLTS 248 (253)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~~~G~~~i~~~~~~~~~~~~~~~~~~~~i--~~l~el~~~l~~ 248 (253)
.|+--..+.+.+. -....+.|+||+. ||..+.+++.+...+-. +. ..-....++++ ++|..+..+|++
T Consensus 98 ~p~~K~~lv~~l~-~~g~~Va~vGDG~-nD~~AL~~AdvGIa~~~--gt---~~a~~aAdivl~~~~l~~v~~~I~~ 167 (168)
T d1wpga2 98 EPSHKSKIVEYLQ-SYDEITAMTGDGV-NDAPALKKAEIGIAMGS--GT---AVAKTASEMVLADDNFSTIVAAVEE 167 (168)
T ss_dssp CHHHHHHHHHHHH-HTTCCEEEEECSG-GGHHHHHHSSEEEEETT--SC---HHHHHTCSEEETTCCTHHHHHHHHH
T ss_pred chhHHHHHHHHHH-hcccceeEEecCC-CCHHHHHhCCEEEEecc--cc---HHHHHhCCEEEccCCHHHHHHHHHc
Confidence 3343444444444 3446899999999 99999999997766532 21 22233455443 458888888764
|
| >d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5' nucleotidase-like domain: Cytosolic IMP-GMP specific 5'-nucleotidase species: Legionella pneumophila [TaxId: 446]
Probab=98.40 E-value=7.2e-07 Score=70.22 Aligned_cols=101 Identities=21% Similarity=0.210 Sum_probs=74.4
Q ss_pred CCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhc---------CCCCCcceeEeeeccccC-----------------
Q 039449 116 FPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPAL---------GVNQGTEWDFGVFSGLEG----------------- 169 (253)
Q Consensus 116 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~---------gl~~~~~f~~~~~~~~~~----------------- 169 (253)
.|.+..+|+.|++.|.++.++||+...+++..+.++ .+.. +||.+++.....
T Consensus 187 ~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~m~y~~~~~~~~g~dWr~--lFDvVIv~A~KP~FF~~~~~~~~v~~~~g 264 (458)
T d2bdea1 187 EKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQG--LFEFVITLANKPRFFYDNLRFLSVNPENG 264 (458)
T ss_dssp CHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHHGGGSCTTCCGGG--TEEEEEESCCHHHHHHSCCCEEEECTTTC
T ss_pred ChhHHHHHHHHHHcCCeEEEEecCcHHHHHHHhhhhcccCCCCCCChHH--hceEEEeCCCCCCccCCCCcceEEeCCCC
Confidence 466889999999999999999999999887776653 3444 888877754311
Q ss_pred c----c---CCC---HHHHHHHHHHhCCCCCCceEEEcCCcccchhhhh-hcCCeEEEEcC
Q 039449 170 V----E---KPD---PRIYEIALERAGNIAPEEALHIGDSFRKDYVPAK-SVGMHALLVDR 219 (253)
Q Consensus 170 ~----~---kp~---~~~~~~~~~~~~~~~~~~~~~iGD~~~~Di~~a~-~~G~~~i~~~~ 219 (253)
. . +|. .--...+.+.+| ...++|++|||+...||...+ ..|+.|++|-.
T Consensus 265 ~l~~~~~~~~~~vY~gGn~~~l~~llg-~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~ 324 (458)
T d2bdea1 265 TMTNVHGPIVPGVYQGGNAKKFTEDLG-VGGDEILYIGDHIYGDILRLKKDCNWRTALVVE 324 (458)
T ss_dssp CEEECCSCCCSEEEEECCHHHHHHHTT-CCGGGEEEEESSCCSCHHHHHHHHCSEEEEECT
T ss_pred ccccCCccccCCccccCCHHHHHHHhC-CCCCcEEEECCccchhhhhhhhhcCCceEEehH
Confidence 0 0 110 111335566678 888899999999999987665 67999999984
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.32 E-value=2.9e-07 Score=67.13 Aligned_cols=43 Identities=7% Similarity=-0.130 Sum_probs=32.1
Q ss_pred CCCHHHHHHHHHHhCCCCCCceEEEcCCc---ccchhhhhhcCCeEEEEc
Q 039449 172 KPDPRIYEIALERAGNIAPEEALHIGDSF---RKDYVPAKSVGMHALLVD 218 (253)
Q Consensus 172 kp~~~~~~~~~~~~~~~~~~~~~~iGD~~---~~Di~~a~~~G~~~i~~~ 218 (253)
-.|..+++.++ + .+.+++++|||+. .||++|.+.+|...+.|.
T Consensus 184 vsKg~al~~L~---~-~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~ 229 (244)
T d2fuea1 184 WDKRYCLDSLD---Q-DSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV 229 (244)
T ss_dssp CSTTHHHHHHT---T-SCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS
T ss_pred ccHHHHHHHHh---c-CChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcC
Confidence 34456665544 4 6789999999973 299999999997666665
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=97.73 E-value=2.8e-05 Score=49.92 Aligned_cols=28 Identities=18% Similarity=0.023 Sum_probs=24.7
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCc
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEY 141 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~ 141 (253)
.|.+++.+.++.|++.|+++++.|+...
T Consensus 24 ~P~~~~Ie~l~~l~~~G~~Iii~TaR~~ 51 (124)
T d1xpja_ 24 LPRLDVIEQLREYHQLGFEIVISTARNM 51 (124)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECTTT
T ss_pred CcCHHHHHHHHHHHHCCCEEEEEecCCc
Confidence 5667888999999999999999999863
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=97.39 E-value=0.00014 Score=46.58 Aligned_cols=41 Identities=15% Similarity=-0.010 Sum_probs=31.8
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchh---hhhhhhcCCC
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQ---DVILPALGVN 154 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~---~~~l~~~gl~ 154 (253)
+|.|++.+.|+.|+++|+.+++.|+...... ...++..|+.
T Consensus 21 kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~~~i~ 64 (122)
T d2obba1 21 EEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 64 (122)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHHcCCC
Confidence 5678999999999999999999999976543 3445555554
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.33 E-value=4.4e-05 Score=55.10 Aligned_cols=32 Identities=13% Similarity=-0.040 Sum_probs=26.2
Q ss_pred hCCCCCCceEEEcC----CcccchhhhhhcCCeEEEEc
Q 039449 185 AGNIAPEEALHIGD----SFRKDYVPAKSVGMHALLVD 218 (253)
Q Consensus 185 ~~~~~~~~~~~iGD----~~~~Di~~a~~~G~~~i~~~ 218 (253)
++ ++++++++||| +. ||++|.+.+|...++++
T Consensus 194 ~~-~~~~ev~afGD~~~~g~-NDi~Ml~~~g~~~~~v~ 229 (243)
T d2amya1 194 EN-DGYKTIYFFGDKTMPGG-NDHEIFTDPRTMGYSVT 229 (243)
T ss_dssp TT-SCCSEEEEEECSCC----CCCHHHHCTTEEEEECS
T ss_pred hC-CCcceEEEEcCCCCCCC-CcHHHHHccCCcEEEeC
Confidence 36 88999999999 67 99999999997777665
|
| >d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NLI interacting factor-like phosphatase domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.02 E-value=0.00016 Score=49.91 Aligned_cols=91 Identities=18% Similarity=0.162 Sum_probs=65.2
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCce
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEA 193 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 193 (253)
...||+.++|+++.+. +.++|.|.+....++.+++.+.-.. .|...++.+......+ .+.+-++.+| -+.+++
T Consensus 55 ~~RP~l~eFL~~l~~~-yei~I~Ta~~~~YA~~il~~ldp~~--~~~~~~~r~~c~~~~~---~~~KdL~~l~-~~l~~v 127 (181)
T d1ta0a_ 55 LKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWG--AFRARLFRESCVFHRG---NYVKDLSRLG-RDLRRV 127 (181)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCSSC--CEEEEECGGGSEEETT---EEECCGGGSC-SCGGGE
T ss_pred ecCCCHHHHHHHHHhc-eEEEEEcCCcHHHHHHHHHHhccCC--ceeEEEEeeeeeecCC---cccccHhhcC-CCHHHe
Confidence 5689999999999987 9999999999999999999987665 6666555443222211 1112356677 888999
Q ss_pred EEEcCCcccchhhhhhcCC
Q 039449 194 LHIGDSFRKDYVPAKSVGM 212 (253)
Q Consensus 194 ~~iGD~~~~Di~~a~~~G~ 212 (253)
++|+|++ .-...-..-|+
T Consensus 128 vivDd~~-~~~~~~~~N~I 145 (181)
T d1ta0a_ 128 LILDNSP-ASYVFHPDNAV 145 (181)
T ss_dssp EEECSCG-GGGTTCGGGBC
T ss_pred EEEcCCh-hhhhcCccCee
Confidence 9999999 44433233343
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.86 E-value=0.038 Score=38.99 Aligned_cols=64 Identities=19% Similarity=0.228 Sum_probs=47.8
Q ss_pred HHHHHHHHcCCCCChHHHHHHHHHHHHHhCCCCCCccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhhhcCCC
Q 039449 79 CVRDSFVRAGYDYDEDTFEKIFRRIYASFGSSAPYTVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILPALGVN 154 (253)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~ 154 (253)
++...+..+|+. .+.+.+..+.. ..+.||+.++++.+.+. .+.+|+|....+.++.+.+.+|+.
T Consensus 57 LIvPFl~a~Gvt--~edL~~fSE~~---------~~lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp 120 (308)
T d1y8aa1 57 LLTPFLAAAGVK--NRDVERIAELS---------AKFVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVR 120 (308)
T ss_dssp HHHHHHHHTTCC--HHHHHHHHHHH---------CCBCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCC
T ss_pred hHHHHHHHhCCC--HHHHHHHhhhc---------eeecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCC
Confidence 355556666663 34443333222 47889999999999987 899999999999999999998885
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.13 E-value=0.0049 Score=43.75 Aligned_cols=31 Identities=19% Similarity=0.082 Sum_probs=25.8
Q ss_pred CceEEEEecCCceeccCCCHHHHHHHHHHHc
Q 039449 6 RLRCITVDVTGTLLAYKGELGDYYCMAAKSV 36 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~~~~~~~~~~~~~~~ 36 (253)
.+|+++||+||||++....+.+...++++++
T Consensus 2 ~~kl~~fDlDGTLl~~~~~i~~~~~~al~~l 32 (243)
T d2amya1 2 GPALCLFDVDGTLTAPRQKITKEMDDFLQKL 32 (243)
T ss_dssp CSEEEEEESBTTTBCTTSCCCHHHHHHHHHH
T ss_pred CCEEEEEcCcCCeeCCCCcCCHHHHHHHHHH
Confidence 4789999999999998877777777777765
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=94.84 E-value=0.0048 Score=42.03 Aligned_cols=18 Identities=28% Similarity=0.460 Sum_probs=15.8
Q ss_pred ccCceEEEEecCCceecc
Q 039449 4 LSRLRCITVDVTGTLLAY 21 (253)
Q Consensus 4 ~~~~k~i~fD~DGTL~~~ 21 (253)
+.++|+++||+||||+|.
T Consensus 2 ~~~ik~~i~DvDGVlTDG 19 (177)
T d1k1ea_ 2 LENIKFVITDVDGVLTDG 19 (177)
T ss_dssp GGGCCEEEEECTTTTSCS
T ss_pred cccCeEEEEccCCcccCC
Confidence 457899999999999984
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=91.08 E-value=0.12 Score=36.67 Aligned_cols=42 Identities=21% Similarity=0.300 Sum_probs=33.0
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcch---hhhhhhhcCCCC
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRY---QDVILPALGVNQ 155 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~---~~~~l~~~gl~~ 155 (253)
.++|++.++++.|+++|++++++||+.... ....+..+|++-
T Consensus 19 ~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~~ 63 (250)
T d2c4na1 19 VAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDV 63 (250)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCC
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhccccc
Confidence 566899999999999999999999987654 334466677754
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=89.47 E-value=0.052 Score=41.57 Aligned_cols=19 Identities=26% Similarity=0.419 Sum_probs=15.8
Q ss_pred ceEEEEecCCceeccCCCH
Q 039449 7 LRCITVDVTGTLLAYKGEL 25 (253)
Q Consensus 7 ~k~i~fD~DGTL~~~~~~~ 25 (253)
+|.|+||+||||++....+
T Consensus 1 ~~~i~fd~dGVll~~~~~~ 19 (380)
T d1qyia_ 1 MKKILFDVDGVFLSEERCF 19 (380)
T ss_dssp CCEEEECSBTTTBCSHHHH
T ss_pred CceEEEeCCcEEEcceeec
Confidence 5889999999999876543
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=88.22 E-value=0.25 Score=35.17 Aligned_cols=49 Identities=24% Similarity=0.171 Sum_probs=35.5
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchh---hhhhhhcCCCCCcceeEeee
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQ---DVILPALGVNQGTEWDFGVF 164 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~---~~~l~~~gl~~~~~f~~~~~ 164 (253)
.+.|++.++++.|+++|++++++||+..... ...+..+|++- ..+.+++
T Consensus 23 ~~i~~a~e~l~~l~~~g~~~~~~TN~~~~~~~~~~~~~~~~g~~~--~~~~v~t 74 (261)
T d1vjra_ 23 SLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDV--PDDAVVT 74 (261)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCC--CGGGEEE
T ss_pred ccCchHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhhcccc--ccceecc
Confidence 5568999999999999999999999865443 34455677754 3344444
|
| >d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NLI interacting factor-like phosphatase domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.04 E-value=0.15 Score=34.40 Aligned_cols=17 Identities=24% Similarity=0.477 Sum_probs=14.4
Q ss_pred CceEEEEecCCceeccC
Q 039449 6 RLRCITVDVTGTLLAYK 22 (253)
Q Consensus 6 ~~k~i~fD~DGTL~~~~ 22 (253)
+..++++|+|+||+++.
T Consensus 14 ~k~~LVLDLDeTLihs~ 30 (181)
T d1ta0a_ 14 DKICVVIDLDETLVHSS 30 (181)
T ss_dssp TSCEEEECCBTTTEEEE
T ss_pred CCeEEEEeCCCCEEccc
Confidence 34789999999999864
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=84.74 E-value=0.24 Score=35.10 Aligned_cols=36 Identities=17% Similarity=0.292 Sum_probs=28.1
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhhhhhh
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQDVILP 149 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~ 149 (253)
.+.|++.+.++.|++.|++++++||++........+
T Consensus 18 ~~i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~ 53 (253)
T d1yv9a1 18 EPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQ 53 (253)
T ss_dssp EECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHH
T ss_pred CcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHH
Confidence 334678899999999999999999987665554443
|
| >d1oi7a2 c.23.4.1 (A:122-288) Succinyl-CoA synthetase, alpha-chain, C-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Succinyl-CoA synthetase domains family: Succinyl-CoA synthetase domains domain: Succinyl-CoA synthetase, alpha-chain, C-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=84.37 E-value=3.4 Score=26.92 Aligned_cols=121 Identities=13% Similarity=0.112 Sum_probs=62.5
Q ss_pred HHHHHHHHcC--CEEEEEeCCC-c--chhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHhCCCCCCceEE
Q 039449 121 PFLRWAREKG--LIVGIISNAE-Y--RYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEEALH 195 (253)
Q Consensus 121 ~~l~~l~~~g--~~~~i~s~~~-~--~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~ 195 (253)
+++..+.++| +...+.+++. . ......+..+.-++ .-..+....+. -.+++.+..++++.. ..+.-+++
T Consensus 38 ~~~~~~~~~g~g~s~~~~~G~~~~~~~~~~d~l~~~~~D~--~t~vI~l~~E~---~~~~~~f~~~~~~~~-~~kpvvv~ 111 (167)
T d1oi7a2 38 EAAAALSQAGLGTTTTVGIGGDPVIGTTFKDLLPLFNEDP--ETEAVVLIGEI---GGSDEEEAAAWVKDH-MKKPVVGF 111 (167)
T ss_dssp HHHHHHHHTTCCEEEEEECCSSSCCSSCHHHHHHHHHTCT--TCCEEEEEECS---SSSHHHHHHHHHHHH-CCSCEEEE
T ss_pred HHHHHHHHcCCCceeEEEecceeecCchHHHHHHHHhhcc--ccceeeEeeec---cchHHHHHHHHHHHh-cCCceEEE
Confidence 5666677765 4444433332 1 11234666665555 33333333332 235677777777777 67777777
Q ss_pred EcCCcccchhhhhhcCCeEEEEcC-CCCC--ChhhhhhcCCcccCCHHHHHHHHhhhh
Q 039449 196 IGDSFRKDYVPAKSVGMHALLVDR-FKTP--DAKEWRKSGAIVLPDLVAVKEFLTSEI 250 (253)
Q Consensus 196 iGD~~~~Di~~a~~~G~~~i~~~~-~~~~--~~~~~~~~~~~~i~~l~el~~~l~~~~ 250 (253)
++-+. ... +++++....+... .+.. ....+++.+.+++++++||.+.+++.+
T Consensus 112 ~~g~~-a~~--~~~~~~a~a~~~s~~g~~~~~~aaf~qaGv~~v~~~~El~d~lk~~l 166 (167)
T d1oi7a2 112 IGGRS-APK--GKRMGHAGAIIMGNVGTPESKLRAFAEAGIPVADTIDEIVELVKKAL 166 (167)
T ss_dssp ESCC---------------------CCSHHHHHHHHHHHTCCBCSSHHHHHHHHHHHH
T ss_pred ecccc-ccc--cccccccchhhcCCCCCHHHHHHHHHHCCCEEcCCHHHHHHHHHHhh
Confidence 76665 433 2233333322221 1211 234667788899999999999998754
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=84.16 E-value=0.23 Score=35.28 Aligned_cols=32 Identities=19% Similarity=0.347 Sum_probs=26.6
Q ss_pred ccCCChHHHHHHHHHcCCEEEEEeCCCcchhh
Q 039449 114 TVFPDSQPFLRWAREKGLIVGIISNAEYRYQD 145 (253)
Q Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~ 145 (253)
.+.|++.++++.|++.|++++++||+.....+
T Consensus 18 ~~i~~a~e~l~~l~~~g~~~~~~TN~s~~~~~ 49 (253)
T d1wvia_ 18 DRIPAGEDFVKRLQERQLPYILVTNNTTRTPE 49 (253)
T ss_dssp EECHHHHHHHHHHHHHTCCEEEEECCCSSCHH
T ss_pred CcCccHHHHHHHHHHCCCCEEEEeCCCCCCHH
Confidence 45688899999999999999999998665433
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=83.51 E-value=2.8 Score=31.50 Aligned_cols=95 Identities=13% Similarity=0.164 Sum_probs=52.6
Q ss_pred hHHHHHHHHHc-CCEEEEE-eCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHH---HHHHHHHHhCCCCCCce
Q 039449 119 SQPFLRWAREK-GLIVGII-SNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPR---IYEIALERAGNIAPEEA 193 (253)
Q Consensus 119 ~~~~l~~l~~~-g~~~~i~-s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~---~~~~~~~~~~~~~~~~~ 193 (253)
..+++++|++. ++.+.++ |+.-.+.....++.+++.. -++..+.....+..+--.. .+..++.+ .+|+=+
T Consensus 16 l~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~kPD~v 90 (376)
T d1f6da_ 16 MAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLFSIVP--DYDLNIMQPGQGLTEITCRILEGLKPILAE---FKPDVV 90 (376)
T ss_dssp HHHHHHHHHHCTTCEEEEEECCTTGGGGHHHHHHTTCCC--SEECCCCSSSSCHHHHHHHHHHHHHHHHHH---HCCSEE
T ss_pred HHHHHHHHHhCCCCCEEEEEcCCCHHHHHHHHHhcCCCC--CcccccCCCCCCHHHHHHHHHHhhHHHHHh---ccCcce
Confidence 45788888775 5776555 5544344566667777654 2211111111110000011 22233333 458899
Q ss_pred EEEcCCcccchhhh---hhcCCeEEEEcC
Q 039449 194 LHIGDSFRKDYVPA---KSVGMHALLVDR 219 (253)
Q Consensus 194 ~~iGD~~~~Di~~a---~~~G~~~i~~~~ 219 (253)
++.||+. .=+.+| ...+++.+++.+
T Consensus 91 ~v~GDr~-e~la~a~aa~~~~ipi~Hieg 118 (376)
T d1f6da_ 91 LVHGDTT-TTLATSLAAFYQRIPVGHVEA 118 (376)
T ss_dssp EEETTCH-HHHHHHHHHHTTTCCEEEESC
T ss_pred eeecccc-chhhHHHHHHhhCceEEEEec
Confidence 9999998 565544 445999999984
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=81.82 E-value=1 Score=34.01 Aligned_cols=94 Identities=17% Similarity=0.214 Sum_probs=53.5
Q ss_pred hHHHHHHHHHc-CCEEE-EEeCCCcchhhhhhhhcCCCCCcceeEeeeccccCccCCCHHHHHHHHHHh----CCCCCCc
Q 039449 119 SQPFLRWAREK-GLIVG-IISNAEYRYQDVILPALGVNQGTEWDFGVFSGLEGVEKPDPRIYEIALERA----GNIAPEE 192 (253)
Q Consensus 119 ~~~~l~~l~~~-g~~~~-i~s~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~----~~~~~~~ 192 (253)
..+++++|++. ++.+. ++|+.-........+.+++.. -++..+..+. ..-...+..++..+ ...+|+=
T Consensus 18 l~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~i~~--~~~~~~~~~~----~~~~~~~~~~i~~~~~~~~~~kpD~ 91 (377)
T d1o6ca_ 18 MAPLVLELKKYPEIDSYVTVTAQHRQMLDQVLDAFHIKP--DFDLNIMKER----QTLAEITSNALVRLDELFKDIKPDI 91 (377)
T ss_dssp HHHHHHHGGGCTTEEEEEEECCSCGGGTHHHHHHTTCCC--SEECCCCCTT----CCHHHHHHHHHHHHHHHHHHHCCSE
T ss_pred HHHHHHHHHhCCCCCEEEEEeCCCHHHHHHHHhhcCCCC--ceeeecCCCC----CCHHHHHHHHHHhhhhhhhhcccce
Confidence 35788888875 55554 455554444566677777765 2221111111 11122222222222 1146889
Q ss_pred eEEEcCCcccchh---hhhhcCCeEEEEcC
Q 039449 193 ALHIGDSFRKDYV---PAKSVGMHALLVDR 219 (253)
Q Consensus 193 ~~~iGD~~~~Di~---~a~~~G~~~i~~~~ 219 (253)
+++.||+. .-+. +|...|++.+++.+
T Consensus 92 v~v~GDr~-e~la~a~aa~~~~Ipi~Hieg 120 (377)
T d1o6ca_ 92 VLVHGDTT-TTFAGSLAAFYHQIAVGHVEA 120 (377)
T ss_dssp EEEETTCH-HHHHHHHHHHHTTCEEEEESC
T ss_pred eEeeeccc-ccchhhhhhhhccceEEEEec
Confidence 99999998 4544 56666999999983
|