Citrus Sinensis ID: 039581

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-
MAVSPESLPEKPLDFRAPPPSPIASGRRSCVTNDDVLTEFLEHSLRVPDLILPDKVFPRQKFIENPPSIDFQSLRSMQSDAVSKLLDSIATIGCFQLVNYGVPVEFINSTMATAGGVFGVSSEKRAAVTRSPEKPYGFEEVHGEEEENEFSEEFVWCRDESLKQEMEGVWPLGYSKFSEKIETLMLDMEKVAEKILQVVRENSERKSVNRNCMEQEQENVGSVCYLYRHCRDVPADSSSLRYDVIRMLIRGVDFSHALCLHICDGASEFHVYSKKGIWWWAVEACNRKANI
ccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccccccccEEEccccccccHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHccccHHHHHHccccccccccccccccccccccccccEEEcccccHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHcccccccccccccccccccccccccccccccEEEcEEEcccccccEEEEEEccccEEEEEEEcccEEEEEEccHHcccc
cccccccccccccEcccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccccccEcHHHHcccccHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHcccHHHcccccccccccccccccccccccccccEEEEEEccccHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccccccEEEEEEEcccccccccccccHHHHHHHHcccccccEEEEEccccccEEEEEcccHHHHHHHHHHHccccc
mavspeslpekpldfrapppspiasgrrscvtnDDVLTEFLEhslrvpdlilpdkvfprqkfienppsidfqslrSMQSDAVSKLLDSIATIGcfqlvnygvpvefinstmataggvfgvssekraavtrspekpygfeevhgeeeenefsEEFVWCRDESLKQEmegvwplgysKFSEKIETLMLDMEKVAEKILQVVREnserksvnrNCMEQEQENVGSVCYLYrhcrdvpadssslrYDVIRMLIRGVDFSHALCLHICDGASEFHVYSKKGIWWWAVEACNRKANI
mavspeslpekpldfrapppspiasgrrsCVTNDDVLTEFLehslrvpdlILPDKVFPRQKFIenppsidfqslRSMQSDAVSKLLDSIATIGCFQLVNYGVPVEFINSTMATAGGVFGVSSEKraavtrspekpygfeevhgeeeenefseEFVWCRDESLKQEMEGVWPLGYSKFSEKIETLMLDMEKVAEKILQVvrenserksvnrncmeqeqeNVGSVCYLYRHCRDVPADSSSLRYDVIRMLIRGVDFSHALCLHICDGASEFHVYSKKGIWWWAVEACNRKANI
MAVSPESLPEKPLDFRAPPPSPIASGRRSCVTNDDVLTEFLEHSLRVPDLILPDKVFPRQKFIENPPSIDFQSLRSMQSDAVSKLLDSIATIGCFQLVNYGVPVEFINSTMATAGGVFGVSSEKRAAVTRSPEKPYGfeevhgeeeenefseefVWCRDESLKQEMEGVWPLGYSKFSEKIETLMLDMEKVAEKILQVVRENSERKSVNRNCMEQEQENVGSVCYLYRHCRDVPADSSSLRYDVIRMLIRGVDFSHALCLHICDGASEFHVYSKKGIWWWAVEACNRKANI
*****************************CVTNDDVLTEFLEHSLRVPDLILPDKVFPRQKFIE****************AVSKLLDSIATIGCFQLVNYGVPVEFINSTMATAGGVFGV*******************************EEFVWCRDESLKQEMEGVWPLGYSKFSEKIETLMLDMEKVAEKILQVV*******************NVGSVCYLYRHCRDVPADSSSLRYDVIRMLIRGVDFSHALCLHICDGASEFHVYSKKGIWWWAVEACN*****
***********************************VLTEFLEHSLRVPDLILPDKVF****FIENPPSIDFQSLRSM**DAVSKLLDSIATIGCFQLVNYGVPVEFINSTMATAGGVFGVSSEKR*******************EEENEFSEEFVWCRDESLKQEMEGVWPLGYSKFSEKIETLMLDMEKVAEKILQVVRENSERKSVNRNCMEQEQENVGSVCYLYRHCRD*************RMLIRGVDFSHALCLHICDGASEFHVYSKKGIWWWAVEACNR****
*********EKPLDFRAPPPSPIASGRRSCVTNDDVLTEFLEHSLRVPDLILPDKVFPRQKFIENPPSIDFQSLRSMQSDAVSKLLDSIATIGCFQLVNYGVPVEFINSTMATAGGVFGVSSE**********KPYGF**************EFVWCRDESLKQEMEGVWPLGYSKFSEKIETLMLDMEKVAEKILQVVRENSERKSVNRNCMEQEQENVGSVCYLYRHCRDVPADSSSLRYDVIRMLIRGVDFSHALCLHICDGASEFHVYSKKGIWWWAVEACNRKANI
*********EKPLDFRAPPPSPIASGRRSCVTNDDVLTEFLEHSLRVPDLILPDKVFPRQKFIENPPSIDFQSLRSMQSDAVSKLLDSIATIGCFQLVNYGVPVEFINSTMATAGGVFGVSSEKR*********PYGFEEVHG*EEENEFSEEFVWCRDESLKQEMEGVWPLGYSKFSEKIETLMLDMEKVAEKILQVVRENSERKSVNRNCMEQEQENVGSVCYLYRHCRDVPADSSSLRYDVIRMLIRGVDFSHALCLHICDGASEFHVYSKKGIWWWAVEACNRKAN*
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAVSPESLPEKPLDFRAPPPSPIASGRRSCVTNDDVLTEFLEHSLRVPDLILPDKVFPRQKFIENPPSIDFQSLRSMQSDAVSKLLDSIATIGCFQLVNYGVPVEFINSTMATAGGVFGVSSEKRAAVTRSPEKPYGFEEVHGEEEENEFSEEFVWCRDESLKQEMEGVWPLGYSKFSEKIETLMLDMEKVAEKILQxxxxxxxxxxxxxxxxxxxxxNVGSVCYLYRHCRDVPADSSSLRYDVIRMLIRGVDFSHALCLHICDGASEFHVYSKKGIWWWAVEACNRKANI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query291 2.2.26 [Sep-21-2011]
Q9C971355 Gibberellin 3-beta-dioxyg no no 0.484 0.397 0.225 1e-05
Q39103358 Gibberellin 3-beta-dioxyg no no 0.432 0.351 0.244 0.0002
Q9FR99306 1-aminocyclopropane-1-car N/A no 0.443 0.421 0.240 0.0008
Q3I411370 Gibberellin 3-beta-dioxyg N/A no 0.350 0.275 0.236 0.0008
>sp|Q9C971|G3OX4_ARATH Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis thaliana GN=At1g80330 PE=1 SV=1 Back     alignment and function desciption
 Score = 50.4 bits (119), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 71/155 (45%), Gaps = 14/155 (9%)

Query: 50  LILPDKVFPRQKFIENPPSIDFQSLRSMQSDAVSKLLDSIATIGCFQLVNYGVPVEFINS 109
           L+ P          E+ P ID  +      D  + + D+  T G FQ+ N+G+  + ++ 
Sbjct: 33  LLRPSSAVSFDAVEESIPVIDLSN-----PDVTTLIGDASKTWGAFQIANHGISQKLLDD 87

Query: 110 TMATAGGVFGVSSEKRAAVTRSPEKPYGFEEVHGEEEENEFSEEFVWCR-----DESLKQ 164
             + +  +F + SE++     S +   G+    GE   + F E+ +W       D+S + 
Sbjct: 88  IESLSKTLFDMPSERKLEAASSDKGVSGY----GEPRISPFFEKKMWSEGFTIADDSYRN 143

Query: 165 EMEGVWPLGYSKFSEKIETLMLDMEKVAEKILQVV 199
               +WP  ++K+   I+  + +MEK+A ++L  +
Sbjct: 144 HFNTLWPHDHTKYCGIIQEYVDEMEKLASRLLYCI 178
Converts the inactive gibbberellin precursors GA9 and GA20 in the bioactives gibberellins GA4 and GA1.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: 1EC: 5
>sp|Q39103|G3OX1_ARATH Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA4 PE=1 SV=2 Back     alignment and function description
>sp|Q9FR99|ACCO_MUSAC 1-aminocyclopropane-1-carboxylate oxidase OS=Musa acuminata GN=MAO1B PE=3 SV=1 Back     alignment and function description
>sp|Q3I411|G3O21_WHEAT Gibberellin 3-beta-dioxygenase 2-1 OS=Triticum aestivum GN=GA3ox2-1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query291
224116148373 predicted protein [Populus trichocarpa] 0.948 0.739 0.673 1e-105
255549844303 conserved hypothetical protein [Ricinus 0.945 0.907 0.660 1e-93
147807922373 hypothetical protein VITISV_013720 [Viti 0.948 0.739 0.622 9e-93
225442487373 PREDICTED: 1-aminocyclopropane-1-carboxy 0.948 0.739 0.618 4e-92
356522234357 PREDICTED: flavonol synthase/flavanone 3 0.896 0.731 0.561 1e-82
357513485369 1-aminocyclopropane-1-carboxylate oxidas 0.920 0.726 0.539 4e-80
356528916358 PREDICTED: S-norcoclaurine synthase 1-li 0.900 0.731 0.546 7e-79
449466675384 PREDICTED: uncharacterized protein LOC10 0.924 0.700 0.528 1e-73
449522554 406 PREDICTED: uncharacterized protein LOC10 0.924 0.662 0.528 2e-73
224059144294 predicted protein [Populus trichocarpa] 0.680 0.673 0.535 9e-68
>gi|224116148|ref|XP_002317225.1| predicted protein [Populus trichocarpa] gi|222860290|gb|EEE97837.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  387 bits (993), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 188/279 (67%), Positives = 220/279 (78%), Gaps = 3/279 (1%)

Query: 1   MAVSPESLPEKPLDFRAPPPSPIASGRRSCVTNDDVLTEFLEHSLRVPDLILPDKVFPRQ 60
           MAVSPE +PE P+DFRAPPPSPIASGRRS VTND VL EFLEHSLRVPDLILPD  FP+Q
Sbjct: 1   MAVSPEYMPENPIDFRAPPPSPIASGRRSSVTNDGVLNEFLEHSLRVPDLILPDNFFPKQ 60

Query: 61  KFIENPPSIDFQSLRSMQSDAVSKLLDSIATIGCFQLVNYGVPVEFINSTMATAGGVFGV 120
           K +E PP ID QSL S +S++V K LDSIA IGCFQLVN+G+P EFI      A G+F +
Sbjct: 61  KIVETPPRIDCQSLNSKESNSVLKTLDSIARIGCFQLVNFGIPSEFIKLVSVMAAGIFQL 120

Query: 121 SSEKRAAVTRSPEKPYGFEEVHGEEE-ENEFSEEFVWCRDESLKQEMEGVWPLGYSKFSE 179
            SEK+AAV +SPEKPYGFEEVHG++E ENE SEEFVW +DESLK +ME +WP GYS FSE
Sbjct: 121 PSEKKAAVMKSPEKPYGFEEVHGDQEAENELSEEFVWSKDESLKLDMERIWPTGYSNFSE 180

Query: 180 KIETLMLDMEKVAEKILQVVRENSERKSVNRNCMEQEQENVGSVCYLYRHCRDVPAD--S 237
           K+ETL  D+  +A KILQV++EN  RKS   N M Q Q+ +G VC LY+H RD+PAD  +
Sbjct: 181 KMETLSSDLGNLAAKILQVLQENCPRKSKYANDMMQRQDLIGPVCCLYKHRRDIPADRLA 240

Query: 238 SSLRYDVIRMLIRGVDFSHALCLHICDGASEFHVYSKKG 276
           S L YDV  MLIRG D+SHALCLH+CD +S+FHVYSKKG
Sbjct: 241 SYLGYDVFSMLIRGTDYSHALCLHLCDASSQFHVYSKKG 279

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255549844|ref|XP_002515973.1| conserved hypothetical protein [Ricinus communis] gi|223544878|gb|EEF46393.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|147807922|emb|CAN77674.1| hypothetical protein VITISV_013720 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225442487|ref|XP_002278331.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase [Vitis vinifera] Back     alignment and taxonomy information
>gi|356522234|ref|XP_003529752.1| PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Glycine max] Back     alignment and taxonomy information
>gi|357513485|ref|XP_003627031.1| 1-aminocyclopropane-1-carboxylate oxidase [Medicago truncatula] gi|355521053|gb|AET01507.1| 1-aminocyclopropane-1-carboxylate oxidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|356528916|ref|XP_003533043.1| PREDICTED: S-norcoclaurine synthase 1-like [Glycine max] Back     alignment and taxonomy information
>gi|449466675|ref|XP_004151051.1| PREDICTED: uncharacterized protein LOC101203918 [Cucumis sativus] Back     alignment and taxonomy information
>gi|449522554|ref|XP_004168291.1| PREDICTED: uncharacterized protein LOC101228436 [Cucumis sativus] Back     alignment and taxonomy information
>gi|224059144|ref|XP_002299737.1| predicted protein [Populus trichocarpa] gi|222846995|gb|EEE84542.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query291
TAIR|locus:2017839299 DTA4 "AT1G79760" [Arabidopsis 0.319 0.311 0.595 6.5e-39
TAIR|locus:2057130356 AT2G38500 "AT2G38500" [Arabido 0.663 0.542 0.299 2.4e-15
TAIR|locus:2017839 DTA4 "AT1G79760" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 299 (110.3 bits), Expect = 6.5e-39, Sum P(2) = 6.5e-39
 Identities = 59/99 (59%), Positives = 75/99 (75%)

Query:    14 DFRAPPPSPIASGRRSCVT-NDDVLTEFLEHSLRVPDLILPDKVFPRQKFIENPPSIDFQ 72
             DFRAPPPSP+AS RR+  T N+DVL+EFL+   RVP+L+LPDKVFP+  F+ NPP+ DF 
Sbjct:     7 DFRAPPPSPVASSRRASFTANEDVLSEFLDKCGRVPNLVLPDKVFPKHTFLLNPPTFDFH 66

Query:    73 SLRSMQSDAVSKLLDSIATIGCFQLVNYGVPVEFINSTM 111
              L     D++S LLD+IATIGCFQLVN+GVP   + + M
Sbjct:    67 RL-----DSLSALLDAIATIGCFQLVNHGVPEAMVKAAM 100
GO:0003674 "molecular_function" evidence=ND
GO:0008150 "biological_process" evidence=ND
GO:0009507 "chloroplast" evidence=ISM
TAIR|locus:2057130 AT2G38500 "AT2G38500" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.11LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.00110267
hypothetical protein (373 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query291
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 2e-07
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 3e-06
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 2e-04
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information 
 Score = 48.4 bits (116), Expect = 2e-07
 Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 1/83 (1%)

Query: 67  PSIDFQSLRSMQSDAVSKLLDSIATIGCFQLVNYGVPVEFINSTMATAGGVFGVSSEKRA 126
           P ID       ++   ++L ++    G FQLVN+G+P E I+     A   F +  E++ 
Sbjct: 2   PVIDLSGDPEDRAAVAAELGEACREWGFFQLVNHGIPEELIDRLFEAAREFFALPLEEKL 61

Query: 127 AVTRSPEKPYGFEEVHGEEEENE 149
              RS     G+  +  E+ + +
Sbjct: 62  KYARSGG-NRGYGSLGAEKTDGK 83

This is the highly conserved N-terminal region of proteins with 2-oxoglutarate/Fe(II)-dependent dioxygenase activity. Length = 113
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 291
PLN02216357 protein SRG1 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN02947374 oxidoreductase 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02515 358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN02904357 oxidoreductase 100.0
PLN02704335 flavonol synthase 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02997325 flavonol synthase 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02299 321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN02485329 oxidoreductase 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.91
PLN03176120 flavanone-3-hydroxylase; Provisional 99.9
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 98.89
>PLN02216 protein SRG1 Back     alignment and domain information 
Probab=100.00  E-value=5.5e-54  Score=398.14  Aligned_cols=240  Identities=16%  Similarity=0.220  Sum_probs=199.6

Q ss_pred             hHHHHhc--CCCCCC-cccCCCCCCCCC----CCCCCceeecCCCCCCc--HHHHHHHHHHHhhhcEEEEEcCCCCHHHH
Q 039581           37 LTEFLEH--SLRVPD-LILPDKVFPRQK----FIENPPSIDFQSLRSMQ--SDAVSKLLDSIATIGCFQLVNYGVPVEFI  107 (291)
Q Consensus        37 ~~~~~~~--~~~vP~-~~~p~~~~~~~~----~~~~iPvIDls~l~~~~--~~~~~~l~~Ac~~~GFF~v~nHGI~~~li  107 (291)
                      +++++..  ...||+ |++|++++|...    ....||||||+.+.+++  .+++++|++||++||||||+||||+.+++
T Consensus        17 ~~~~~~~~~~~~~p~~~v~p~~~~~~~~~~~~~~~~iPvIDls~~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHGI~~~li   96 (357)
T PLN02216         17 VQEMVKEKMITTVPPRYVRSDQDKTEIAVDSGLSSEIPIIDMKRLCSSTAMDSEVEKLDFACKEWGFFQLVNHGIDSSFL   96 (357)
T ss_pred             HHHHHhcCCCCCCCHhhCcCcccCCccccccCcCCCCCeEEChhccCCccHHHHHHHHHHHHHHCcEEEEECCCCCHHHH
Confidence            4455543  478998 999998887431    12579999999986653  46899999999999999999999999999


Q ss_pred             HHHHHHHHhhhCCCHHHHhccccCCCCCccccccCCC--cccCCCcceeeeccCccchhhccCCCCCChhHHHHHHHHHH
Q 039581          108 NSTMATAGGVFGVSSEKRAAVTRSPEKPYGFEEVHGE--EEENEFSEEFVWCRDESLKQEMEGVWPLGYSKFSEKIETLM  185 (291)
Q Consensus       108 ~~~~~~~~~FF~LP~eeK~~~~~~~~~~~GY~~~~~~--~~~~d~~E~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~  185 (291)
                      +++++++++||+||.|+|+++...++..+||+.....  ....|++|.|..... +......+.||+.++.||+++++|+
T Consensus        97 ~~~~~~~~~FF~LP~eeK~k~~~~~~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~-p~~~~~~~~WP~~p~~fr~~~~~y~  175 (357)
T PLN02216         97 DKVKSEIQDFFNLPMEEKKKLWQRPGEIEGFGQAFVVSEDQKLDWADMFFLTMQ-PVRLRKPHLFPKLPLPFRDTLETYS  175 (357)
T ss_pred             HHHHHHHHHHHcCCHHHHHhhhcCCCCccccCccccccccccCCceeeeeeecc-CcccccchhcccchHHHHHHHHHHH
Confidence            9999999999999999999997765668899765432  223477887765421 2223457889999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCccccchhhhcCCceeeEEeecCCCCCCCCCCCCcccccccccccccCCCCceEEEee-C
Q 039581          186 LDMEKVAEKILQVVRENSERKSVNRNCMEQEQENVGSVCYLYRHCRDVPADSSSLRYDVIRMLIRGVDFSHALCLHIC-D  264 (291)
Q Consensus       186 ~~~~~la~~ll~~la~~Lgl~~~~f~~~~~~~~~~~lrl~~YP~~~~~~~~~~~~~~~~~~~~~~HtD~~~~lTlL~q-d  264 (291)
                      ++|++|+.+||++||++|||++++|.+++.+...+.||+||||+|++++..         +|+++|||+ ++||||+| +
T Consensus       176 ~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~lRl~~YPp~p~~~~~---------~G~~~HtD~-g~lTlL~q~~  245 (357)
T PLN02216        176 AEVKSIAKILFAKMASALEIKPEEMEKLFDDDLGQSIRMNYYPPCPQPDQV---------IGLTPHSDA-VGLTILLQVN  245 (357)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCHHHHHHHhccCchheeEEeecCCCCCcccc---------cCccCcccC-ceEEEEEecC
Confidence            999999999999999999999999999887643467999999999986532         669999995 66999999 5


Q ss_pred             CCCceEEeeCCcccceeEeecCCCCCC
Q 039581          265 GASEFHVYSKKGIWWWAVEACNRKANI  291 (291)
Q Consensus       265 ~~~GLqV~~~g~W~~~~~~V~p~pgal  291 (291)
                      +++||||+++|+|    ++|+|+||+|
T Consensus       246 ~v~GLQV~~~g~W----i~V~p~pgal  268 (357)
T PLN02216        246 EVEGLQIKKDGKW----VSVKPLPNAL  268 (357)
T ss_pred             CCCceeEEECCEE----EECCCCCCeE
Confidence            7999999999999    9999999986

>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query291
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 6e-11
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 3e-10
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 4e-09
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 2e-08
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 5e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 3e-06
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
 Score = 61.1 bits (149), Expect = 6e-11
 Identities = 22/143 (15%), Positives = 53/143 (37%), Gaps = 7/143 (4%)

Query: 67  PSIDFQSLRSMQSDAVSKLLDSIA----TIGCFQLVNYGVPVEFINSTMATAGGVFGVSS 122
           P+ID +++ S         ++ +       G   L+N+G+P + +          F +S 
Sbjct: 48  PTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSV 107

Query: 123 E--KRAAVTRSPEKPYGFEEVHGEEEENEFS-EEFVWCRDESLKQEMEGVWPLGYSKFSE 179
           E  ++ A  ++  K  G+          +   E++ +      ++    +WP   S + E
Sbjct: 108 EEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIE 167

Query: 180 KIETLMLDMEKVAEKILQVVREN 202
                   +  +A K+ + +   
Sbjct: 168 ATSEYAKCLRLLATKVFKALSVG 190
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query291
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1w9y_A 319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
Probab=100.00  E-value=5.4e-54  Score=397.83  Aligned_cols=240  Identities=14%  Similarity=0.215  Sum_probs=202.3

Q ss_pred             hHHHHhcC-CCCCC-cccCCCCCCCCCC---------CCCCceeecCCCCCCc----HHHHHHHHHHHhhhcEEEEEcCC
Q 039581           37 LTEFLEHS-LRVPD-LILPDKVFPRQKF---------IENPPSIDFQSLRSMQ----SDAVSKLLDSIATIGCFQLVNYG  101 (291)
Q Consensus        37 ~~~~~~~~-~~vP~-~~~p~~~~~~~~~---------~~~iPvIDls~l~~~~----~~~~~~l~~Ac~~~GFF~v~nHG  101 (291)
                      ++++++++ .+||+ |++|+.+++....         ..+||||||+.|.+++    .+++++|.+||++||||||+|||
T Consensus         7 v~~l~~~~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~nHG   86 (356)
T 1gp6_A            7 VESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHG   86 (356)
T ss_dssp             HHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEESCS
T ss_pred             HHHHHhcCCCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEeCCC
Confidence            46777654 89998 9999877664221         2369999999987644    35889999999999999999999


Q ss_pred             CCHHHHHHHHHHHHhhhCCCHHHHhccccCC--CCCccccccCCC--cccCCCcceeeeccCccchhhccCCCCCChhHH
Q 039581          102 VPVEFINSTMATAGGVFGVSSEKRAAVTRSP--EKPYGFEEVHGE--EEENEFSEEFVWCRDESLKQEMEGVWPLGYSKF  177 (291)
Q Consensus       102 I~~~li~~~~~~~~~FF~LP~eeK~~~~~~~--~~~~GY~~~~~~--~~~~d~~E~~~~~~~~~~~~~~~~~wP~~~~~f  177 (291)
                      |+.++++++++.+++||+||.|+|+++.+..  ..++||+.....  ....|++|.|.+... +......|.||+.++.|
T Consensus        87 i~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~-p~~~~~~~~wP~~~~~f  165 (356)
T 1gp6_A           87 IPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAY-PEEKRDLSIWPKTPSDY  165 (356)
T ss_dssp             CCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEE-SGGGCCGGGSCCSSTTH
T ss_pred             CCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecC-CccccccccCCCcchhh
Confidence            9999999999999999999999999998763  478999876532  235689999987532 11123568899999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccchhhhc--CCceeeEEeecCCCCCCCCCCCCcccccccccccccCCC
Q 039581          178 SEKIETLMLDMEKVAEKILQVVRENSERKSVNRNCMEQE--QENVGSVCYLYRHCRDVPADSSSLRYDVIRMLIRGVDFS  255 (291)
Q Consensus       178 r~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~f~~~~~~--~~~~~lrl~~YP~~~~~~~~~~~~~~~~~~~~~~HtD~~  255 (291)
                      |+++++|+++|++|+.+||++|+++|||++++|.+++..  .+.+.||+||||+|++++..         +|+++|||+ 
T Consensus       166 r~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~---------~g~~~HtD~-  235 (356)
T 1gp6_A          166 IEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELA---------LGVEAHTDV-  235 (356)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTC---------CSEEEECCC-
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccc---------cCcCCccCC-
Confidence            999999999999999999999999999999999998863  23678999999999987642         669999995 


Q ss_pred             CceEEEeeCCCCceEEeeCCcccceeEeecCCCCCC
Q 039581          256 HALCLHICDGASEFHVYSKKGIWWWAVEACNRKANI  291 (291)
Q Consensus       256 ~~lTlL~qd~~~GLqV~~~g~W~~~~~~V~p~pgal  291 (291)
                      ++||||+||+++||||+++|+|    ++|+|+||+|
T Consensus       236 g~lTlL~qd~v~GLQV~~~g~W----i~V~p~pgal  267 (356)
T 1gp6_A          236 SALTFILHNMVPGLQLFYEGKW----VTAKCVPDSI  267 (356)
T ss_dssp             SSEEEEEECSCCCEEEEETTEE----EECCCCTTCE
T ss_pred             CeEEEEEEcCCCCeEEecCCcE----EECcCCCCeE
Confidence            5699999999999999999999    9999999985
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 291
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 1e-11
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 5e-10
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 6e-06
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 1e-04
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Deacetoxycephalosporin C synthase
species: Streptomyces clavuligerus [TaxId: 1901]

 Score = 61.9 bits (149), Expect = 1e-11
 Identities = 26/216 (12%), Positives = 49/216 (22%), Gaps = 11/216 (5%)

Query: 67  PSIDFQSLRSMQSDAVSKLLDSIATIGCFQLVNYGVPVEFINSTMATAGGVFGVSSEKRA 126
           P+     L+        +    +   G F L + G+    + S        F   SE   
Sbjct: 6   PTFSLAELQQ--GLHQDEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEK 63

Query: 127 AVTRSPEKP--YGFEEVHGEEEENEFSEEFVWCRDESLKQEMEGVWPLGYSKFSEKIETL 184
               SP      GF  +  E      +                         F       
Sbjct: 64  RAVTSPVPTMRRGFTGLESESTAQITNTGSYSDYSMCYSMGTAD-NLFPSGDFERIWTQY 122

Query: 185 MLDMEKVAEKILQVVRENSERKSVNRNCMEQEQENVGSVCYLYRHCRDVPADSSSLRYDV 244
                  +  + + V   +  +         + E +    Y  +      A+   LR   
Sbjct: 123 FDRQYTASRAVAREVLRATGTEPDGGVEAFLDCEPLLRFRYFPQVPEHRSAEEQPLR--- 179

Query: 245 IRMLIRGVDFSHALCLHICDGASEFHVYSKKGIWWW 280
              +    D S    +     A+ F     +    +
Sbjct: 180 ---MAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAF 212
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query291
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=7.5e-50  Score=366.95  Aligned_cols=243  Identities=14%  Similarity=0.215  Sum_probs=195.3

Q ss_pred             hhhhHHHHhcC-CCCCC-cccCCCCCCCC---------CCCCCCceeecCCCCCCc----HHHHHHHHHHHhhhcEEEEE
Q 039581           34 DDVLTEFLEHS-LRVPD-LILPDKVFPRQ---------KFIENPPSIDFQSLRSMQ----SDAVSKLLDSIATIGCFQLV   98 (291)
Q Consensus        34 ~~~~~~~~~~~-~~vP~-~~~p~~~~~~~---------~~~~~iPvIDls~l~~~~----~~~~~~l~~Ac~~~GFF~v~   98 (291)
                      +.-++.++.++ .+||+ |++|+.++|..         ....+||||||+.|.+++    .+++++|.+||++||||||+
T Consensus         3 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~   82 (349)
T d1gp6a_           3 VERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLI   82 (349)
T ss_dssp             CCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred             CcchHHHHhCCCccCCHhhcCChhhcCCCCccccccccCCCCCcCeEEChhcCCCCHHHHHHHHHHHHHHHHhCCEEEEE
Confidence            34566788765 99999 99999887753         245689999999998765    46789999999999999999


Q ss_pred             cCCCCHHHHHHHHHHHHhhhCCCHHHHhccccC--CCCCccccccCCCc--ccCCCcceeeeccCccchhhccCCCCCCh
Q 039581           99 NYGVPVEFINSTMATAGGVFGVSSEKRAAVTRS--PEKPYGFEEVHGEE--EENEFSEEFVWCRDESLKQEMEGVWPLGY  174 (291)
Q Consensus        99 nHGI~~~li~~~~~~~~~FF~LP~eeK~~~~~~--~~~~~GY~~~~~~~--~~~d~~E~~~~~~~~~~~~~~~~~wP~~~  174 (291)
                      ||||+.++++++++++++||+||.|+|+++...  .+...||+......  ...++.+.+ +....+......|.||+.+
T Consensus        83 nHGI~~~li~~~~~~~~~FF~lP~eeK~k~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~n~wp~~~  161 (349)
T d1gp6a_          83 NHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYF-FHLAYPEEKRDLSIWPKTP  161 (349)
T ss_dssp             SCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEE-EEEEESGGGCCGGGSCCSS
T ss_pred             ccCCCHHHHHHHHHHHHHHHcCCHHHHhhhhcccccCCccccccccccccccccchhhhh-ccccccccccccccccccc
Confidence            999999999999999999999999999999764  23445555443222  112222222 2111122234568899999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccchhhhc--CCceeeEEeecCCCCCCCCCCCCccccccccccccc
Q 039581          175 SKFSEKIETLMLDMEKVAEKILQVVRENSERKSVNRNCMEQE--QENVGSVCYLYRHCRDVPADSSSLRYDVIRMLIRGV  252 (291)
Q Consensus       175 ~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~f~~~~~~--~~~~~lrl~~YP~~~~~~~~~~~~~~~~~~~~~~Ht  252 (291)
                      +.|++.+++|+++|.+|+.+|+++++++||+++++|.+++..  ...+.||++|||+++.....         .|+++||
T Consensus       162 ~~f~e~~~~~~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~---------~g~~~Ht  232 (349)
T d1gp6a_         162 SDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELA---------LGVEAHT  232 (349)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTC---------CSEEEEC
T ss_pred             chHHHHHHHHHHHHHHHHHhhhHHHHHHcCCCHHHHHHHhccccccceeeeecccccccchhhc---------cccccCC
Confidence            999999999999999999999999999999999999887642  23567999999999876532         5699999


Q ss_pred             CCCCceEEEeeCCCCceEEeeCCcccceeEeecCCCCCC
Q 039581          253 DFSHALCLHICDGASEFHVYSKKGIWWWAVEACNRKANI  291 (291)
Q Consensus       253 D~~~~lTlL~qd~~~GLqV~~~g~W~~~~~~V~p~pgal  291 (291)
                      |+ ++||||+|++++||||+++|+|    ++|+|.+|+|
T Consensus       233 D~-g~lTlL~q~~~~GLqv~~~g~W----~~V~p~~~a~  266 (349)
T d1gp6a_         233 DV-SALTFILHNMVPGLQLFYEGKW----VTAKCVPDSI  266 (349)
T ss_dssp             CC-SSEEEEEECSCCCEEEEETTEE----EECCCCTTCE
T ss_pred             CC-cceEEEeccCCcceeeecCCce----EEccCCCCCe
Confidence            95 5699999999999999999999    9999999985
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure