Citrus Sinensis ID: 039585

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------37
Protein Sequence
MAVLPISVIFLAFISIPYSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSPAASPNPRPLASPMPSAKPALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLPRGLGLLRVDNMLVKDPRTKPLVDQYASNE
Secondary Structure (PSIPRED)
cccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccHHHHHHHcccccccccccEEEEccccccccccccccccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccHHHHHHHHHccccccccccccHHHccccccHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cccccEEHEEEEEEccccEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccEccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHccccccHHHccccccccccccccHHHcccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccccEccEEcccccHHHHHHHcccccccHHHHHHHHHcccccHHHHHHHHHHHHccEEEHHHcHHHcccHHHcccccccccHHHHHHHHHHccccccccccEccccccccccccHHHHHHHHHcccccccHHHHcccccHHHHHHHHHccc
Coil and Loop (DISEMBL)
MAVLPISVIFLAFIsipysianpnspnaspkpspvaspkpspraspkpspvaspkpsplaspkpspvaspkpsplaspkpspaaspnprplaspmpsakpalradyykttcPDFEKIVREFVHqkqtqspstAAGALRVFMHdcfvdgcdgsvlissnafnvaerdsdinlslpgdaFDVVIKIKNAledacpgvvsCADILTASTRNLVVmaggprfnvsfgrkdglvsqaaripgnlptnnmtMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKEFSDRlfkfapnqptdpelnpKYAEALKAACKNHEQNitmtafndvmspgkfdnsyfrglprglgllrvdnmlvkdprtkplvdqyasne
Flexible Loop (DISEMBL)
MAVLPISVIFLAFISIPYSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSPAASPNPRPLASPMPSAKPALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVsqaaripgnlptnnmTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLPRGLGLLrvdnmlvkdprtkplvdqyasne
Low Complexity Region (SEG)
MAVLPISVIFLAFISIPYSIanpnspnaspkpspvaspkpspraspkpspvaspkpsplaspkpspvaspkpsplaspkpspaaspnprplaspMPSAKPALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFrglprglgllrVDNMLVKDPRTKPLVDQYASNE
Disordered region (IsUnstruct)
**VLPISVIFLAFISIPYSI**********************************************************************************RADYYKTTCPDFEKIVREFVHQ********AAGALRVFMHDCFVDGCDGSVLISSNAFNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKEFSDRLFKFA********************************************************************************
Disordered Region (DISOPRED)
**VLPISVIFLAFISIPYSIA***************************************************************SPNPRPLASPMPSAKPALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNA******D***NLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKA**********MTAFNDVMSPGKFDNSYFRGLPRGLGLLRVDNMLVKDPRTKPLVDQYA***
Disordered Region (DISEMBL)
MAVLPISVIFLAFISIPYSIANPN************************************************************************SAKPALRADYYKTTCPDFEKIVREFV**********AAGALRVFMHDCFVDGCDGSVLISSNAFNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLPRGLGLLRVDNMLVKDPRTKPLVDQYASNE
Disordered Region (DISPRO)
*AVLPISVIFLAFISIPYSIANP****************************************************ASPKPSPAASPNPRPLASPMPSAKPALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLPRGLGLLRVDNMLVKDPRTKPLVDQYAS**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAVLPISVIFLAFISIPYSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSPAASPNPRPLASPMPSAKPALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLPRGLGLLRVDNMLVKDPRTKPLVDQYASNE
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	368	2.2.26 [Sep-21-2011]
Q9FJR1	334	Peroxidase 65 OS=Arabidop	yes	no	0.744	0.820	0.609	2e-98
O23609	326	Peroxidase 41 OS=Arabidop	no	no	0.717	0.809	0.594	1e-92
O48677	326	Peroxidase 6 OS=Arabidops	no	no	0.720	0.812	0.544	1e-85
Q9FL16	328	Peroxidase 63 OS=Arabidop	no	no	0.725	0.814	0.525	1e-82
Q9LHA7	316	Peroxidase 31 OS=Arabidop	no	no	0.722	0.841	0.492	1e-77
Q9SZE7	329	Peroxidase 51 OS=Arabidop	no	no	0.714	0.799	0.459	1e-63
Q96509	330	Peroxidase 55 OS=Arabidop	no	no	0.744	0.830	0.444	2e-63
Q43731	329	Peroxidase 50 OS=Arabidop	no	no	0.717	0.802	0.442	2e-62
Q43873	329	Peroxidase 73 OS=Arabidop	no	no	0.717	0.802	0.449	1e-60
Q96518	323	Peroxidase 16 OS=Arabidop	no	no	0.711	0.811	0.434	2e-59

>sp|Q9FJR1|PER65_ARATH Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=2 SV=2

 Score =  359 bits (922), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 170/279 (60%), Positives = 210/279 (75%), Gaps = 5/279 (1%)

Query: 91  LASPMPSAKPA-LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGC 149
           + +P+ SA  A LR DYY+ TCPDF KIVRE V  KQ Q P+TAAG LR+F HDCF++GC
Sbjct: 21  VVAPIISADVAILRTDYYQKTCPDFHKIVREAVTTKQVQQPTTAAGTLRLFFHDCFLEGC 80

Query: 150 DGSVLISSNAFNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNL 209
           D SVLI++N+FN AERD D+N SLPGDAFD+V +IK ALE +CPGVVSCADIL  +TR+L
Sbjct: 81  DASVLIATNSFNKAERDDDLNDSLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDL 140

Query: 210 VVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGA 269
           V M GGP F+V  GRKDG  S+A ++ GN+P  N T+ +I  +F   GFS++E VAL GA
Sbjct: 141 VTMVGGPYFDVKLGRKDGFESKAHKVRGNVPMANQTVPDIHGIFKKNGFSLREMVALSGA 200

Query: 270 HTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGK 329
           HTIGF+HCKEFSDRL+        D E+NP++A ALK  CKNH  + T+ AFNDVM+PGK
Sbjct: 201 HTIGFSHCKEFSDRLY----GSRADKEINPRFAAALKDLCKNHTVDDTIAAFNDVMTPGK 256

Query: 330 FDNSYFRGLPRGLGLLRVDNMLVKDPRTKPLVDQYASNE 368
           FDN YF+ L RGLGLL  D++L+KD  TKP VD YA+NE
Sbjct: 257 FDNMYFKNLKRGLGLLASDHILIKDNSTKPFVDLYATNE 295

Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 7

>sp|O23609|PER41_ARATH Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=3 SV=1

 Score =  340 bits (871), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 160/269 (59%), Positives = 199/269 (73%), Gaps = 5/269 (1%)

Query: 100 PALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNA 159
           P L  DYY+ TCPDF KIVRE V  KQ Q P+TAAG LR+F HDCF++GCD SVLI++N+
Sbjct: 24  PNLTKDYYQKTCPDFNKIVRETVTPKQGQQPTTAAGTLRLFFHDCFMEGCDASVLIATNS 83

Query: 160 FNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFN 219
           FN AERD D+N SLPGDAFD+V +IK ALE +CPGVVSCADIL  +TR+LV M GGP + 
Sbjct: 84  FNKAERDDDLNESLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPFYE 143

Query: 220 VSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKE 279
           V  GRKDG  S+A ++ GNLP  N ++ ++L +F   GF+++E VAL G HTIGF+HCKE
Sbjct: 144 VKLGRKDGFESKAHKVKGNLPLANQSVPDMLSIFKKNGFTLKELVALSGGHTIGFSHCKE 203

Query: 280 FSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLP 339
           FS+R+F        DPELN K+A  LK  CKN E N TM AF D ++PGKFDN YF+ L 
Sbjct: 204 FSNRIF-----PKVDPELNAKFAGVLKDLCKNFETNKTMAAFLDPVTPGKFDNMYFKNLK 258

Query: 340 RGLGLLRVDNMLVKDPRTKPLVDQYASNE 368
           RGLGLL  D++L KDP T+P V+ YA+N+
Sbjct: 259 RGLGLLASDHILFKDPSTRPFVELYANNQ 287

Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: .

EC: 7

>sp|O48677|PER6_ARATH Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 SV=1

 Score =  317 bits (811), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 146/268 (54%), Positives = 189/268 (70%), Gaps = 3/268 (1%)

Query: 102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN 161
           L +DYY  TCP+FE+ + + V  KQ  +P+TA G LR+F HDC VDGCD S+L++S    
Sbjct: 22  LSSDYYTKTCPEFEETLVQIVTDKQIAAPTTAVGTLRLFFHDCMVDGCDASILVASTPRK 81

Query: 162 VAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVS 221
            +ERD+DIN SLPGDAFDV+ +IK A+E  CP +VSC+DIL  +TR+L+ M GGPR NV 
Sbjct: 82  TSERDADINRSLPGDAFDVITRIKTAVELKCPNIVSCSDILVGATRSLISMVGGPRVNVK 141

Query: 222 FGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKEFS 281
           FGRKD LVS   R+ G L   NMTMD I+ +F S G ++QE VAL+GAHTIGF+HCKEF+
Sbjct: 142 FGRKDSLVSDMNRVEGKLARPNMTMDHIISIFESSGLTVQEMVALVGAHTIGFSHCKEFA 201

Query: 282 DRLF-KFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLPR 340
            R+F K   N P   E+NPKYA  L+  C N+  +  M+AFNDV +PGKFDN Y++ L  
Sbjct: 202 SRIFNKSDQNGPV--EMNPKYAAELRKLCANYTNDEQMSAFNDVFTPGKFDNMYYKNLKH 259

Query: 341 GLGLLRVDNMLVKDPRTKPLVDQYASNE 368
           G GLL+ D+ +  D RT+ LVD YA +E
Sbjct: 260 GYGLLQSDHAIAFDNRTRSLVDLYAEDE 287

Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: .

EC: 7

>sp|Q9FL16|PER63_ARATH Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1

 Score =  306 bits (785), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 143/272 (52%), Positives = 194/272 (71%), Gaps = 5/272 (1%)

Query: 97  SAKPALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLIS 156
           +A+  L  D+Y  +CP F  I+RE +  KQ  +P+TAA ALR+F HDCF +GCD SVL+S
Sbjct: 27  AAESHLTVDFYSKSCPKFLDIIRETITNKQISTPTTAAAALRLFFHDCFPNGCDASVLVS 86

Query: 157 SNAFNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGP 216
           S AFN AERDS INLSLPGD FDVVI+ K ALE ACP  VSC+DI+  + R+L+V  GGP
Sbjct: 87  STAFNTAERDSSINLSLPGDGFDVVIRAKTALELACPNTVSCSDIIAVAVRDLLVTVGGP 146

Query: 217 RFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAH 276
            + +S GR+D   S+++ +   LP  +M + +++  F+S+GFS+QE VAL GAHTIGF+H
Sbjct: 147 YYEISLGRRDSRTSKSSLVSDLLPLPSMQISKLIDQFSSRGFSVQEMVALSGAHTIGFSH 206

Query: 277 CKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFR 336
           CKEF++R+    PN  T    NP++A ALK AC N + + T++ FNDVM+P KFDN YF+
Sbjct: 207 CKEFTNRV---NPNNSTG--YNPRFAVALKKACSNSKNDPTISVFNDVMTPNKFDNMYFQ 261

Query: 337 GLPRGLGLLRVDNMLVKDPRTKPLVDQYASNE 368
            +P+GLGLL  D+ L  DPRT+P V+ YA ++
Sbjct: 262 NIPKGLGLLESDHGLFSDPRTRPFVELYARDQ 293

Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: .

EC: 7

>sp|Q9LHA7|PER31_ARATH Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1

 Score =  290 bits (741), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 134/272 (49%), Positives = 190/272 (69%), Gaps = 6/272 (2%)

Query: 97  SAKPALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLIS 156
           +A+  L  ++Y  TCP F  I+R+ +  KQ  +P+TAA  +R+F HDCF +GCD SVLIS
Sbjct: 16  TAQSRLTTNFYSKTCPRFLDIIRDTITNKQITNPTTAAAVIRLFFHDCFPNGCDASVLIS 75

Query: 157 SNAFNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGP 216
           S AFN AERDS INLSLPGD FDV+++ K ALE ACP  VSC+DI++ +TR+L++  GGP
Sbjct: 76  STAFNTAERDSSINLSLPGDGFDVIVRAKTALELACPNTVSCSDIISVATRDLLITVGGP 135

Query: 217 RFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAH 276
            ++V  GR+D   S+++ +   LP  +  + +I++ F SKGF++QE VAL GAH+IGF+H
Sbjct: 136 YYDVFLGRRDSRTSKSSLLTDLLPLPSTPISKIIQQFESKGFTVQEMVALSGAHSIGFSH 195

Query: 277 CKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFR 336
           CKEF  R+ +       +   NP++A ALK AC N+ ++ T++ FND+M+P KFDN Y++
Sbjct: 196 CKEFVGRVGR------NNTGYNPRFAVALKKACANYPKDPTISVFNDIMTPNKFDNMYYQ 249

Query: 337 GLPRGLGLLRVDNMLVKDPRTKPLVDQYASNE 368
            L +GLGLL  D+ L  DPRT+  VD YA N+
Sbjct: 250 NLKKGLGLLESDHGLYSDPRTRYFVDLYAKNQ 281

Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: .

EC: 7

>sp|Q9SZE7|PER51_ARATH Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=2 SV=1

 Score =  243 bits (621), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 124/270 (45%), Positives = 170/270 (62%), Gaps = 7/270 (2%)

Query: 102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN 161
           LR D+Y  TCP+ E+IVR  V +K  Q+ +T    LR++ HDCFV+GCD SV+I+S   N
Sbjct: 27  LRGDFYAGTCPNVEQIVRNAVQKKIQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNTN 86

Query: 162 VAERDSDINLSLPGDAFDVVIKIKNALEDA--CPGVVSCADILTASTRNLVVMAGGPRFN 219
            AE+D + NLSL GD FD VIK K A++    C   VSCADILT +TR++V +AGGP++ 
Sbjct: 87  KAEKDHEDNLSLAGDGFDTVIKAKEAVDAVPNCRNKVSCADILTMATRDVVNLAGGPQYA 146

Query: 220 VSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKE 279
           V  GR+DGL S A+ + G LP     ++++  +FA  G S  + +AL GAHT+GFAHC +
Sbjct: 147 VELGRRDGLSSSASSVTGKLPKPTFDLNQLNALFAENGLSPNDMIALSGAHTLGFAHCTK 206

Query: 280 FSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNIT-MTAFN-DVMSPGKFDNSYFRG 337
             +RL+ F      DP +N  Y   LKA+C    QNI    A N D  +P +FDN Y++ 
Sbjct: 207 VFNRLYNFNKTNNVDPTINKDYVTELKASC---PQNIDPRVAINMDPNTPRQFDNVYYKN 263

Query: 338 LPRGLGLLRVDNMLVKDPRTKPLVDQYASN 367
           L +G GL   D +L  D R+KP VD +A+N
Sbjct: 264 LQQGKGLFTSDQVLFTDSRSKPTVDLWANN 293

Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: .

EC: 7

>sp|Q96509|PER55_ARATH Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1

 Score =  243 bits (620), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 123/277 (44%), Positives = 173/277 (62%), Gaps = 3/277 (1%)

Query: 91  LASPMPSAKPALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCD 150
           L S +  +   L  +YY +TCP  E IV++ V  K  Q+ +TA   LR+F HDCFV+GCD
Sbjct: 21  LFSMVAESNAQLSENYYASTCPSVELIVKQAVTTKFKQTVTTAPATLRMFFHDCFVEGCD 80

Query: 151 GSVLISSNAFNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLV 210
            SV I+S   + AE+D+D N SL GD FD VIK K A+E  CPGVVSCADIL  + R++V
Sbjct: 81  ASVFIASENED-AEKDADDNKSLAGDGFDTVIKAKTAVESQCPGVVSCADILALAARDVV 139

Query: 211 VMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAH 270
           V+ GGP F V  GR+DGLVS+A+R+ G LP   + +  ++++FAS G S+ + +AL GAH
Sbjct: 140 VLVGGPEFKVELGRRDGLVSKASRVTGKLPEPGLDVRGLVQIFASNGLSLTDMIALSGAH 199

Query: 271 TIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKF 330
           TIG +HC  F++RL  F+   P DP ++P YA+ L  AC +   +  +    D+ S   F
Sbjct: 200 TIGSSHCNRFANRLHNFSTFMPVDPTMDPVYAQQLIQACSDPNPDAVVDI--DLTSRDTF 257

Query: 331 DNSYFRGLPRGLGLLRVDNMLVKDPRTKPLVDQYASN 367
           DNSY++ L    GL   D  L  D  ++  V ++A+N
Sbjct: 258 DNSYYQNLVARKGLFTSDQALFNDLSSQATVVRFANN 294

Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: .

EC: 7

>sp|Q43731|PER50_ARATH Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=1 SV=1

 Score =  239 bits (610), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 119/269 (44%), Positives = 171/269 (63%), Gaps = 5/269 (1%)

Query: 102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN 161
           LR ++Y  +CP+ E+IVR  V +K  Q+ +T    LR++ HDCFV+GCD SV+I+S   N
Sbjct: 27  LRRNFYAGSCPNVEQIVRNAVQKKVQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNNN 86

Query: 162 VAERDSDINLSLPGDAFDVVIKIKNALEDA--CPGVVSCADILTASTRNLVVMAGGPRFN 219
            AE+D + NLSL GD FD VIK K AL+    C   VSCADILT +TR++V +AGGP+++
Sbjct: 87  KAEKDHEENLSLAGDGFDTVIKAKEALDAVPNCRNKVSCADILTMATRDVVNLAGGPQYD 146

Query: 220 VSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKE 279
           V  GR DGL S AA + G LP     ++++  +FA  G S+ + +AL GAHT+GFAHC +
Sbjct: 147 VELGRLDGLSSTAASVGGKLPHPTDDVNKLTSLFAKNGLSLNDMIALSGAHTLGFAHCTK 206

Query: 280 FSDRLFKFAPNQPTDPELNPKYAEALKAAC-KNHEQNITMTAFNDVMSPGKFDNSYFRGL 338
             +R++ F      DP +N  Y   LKA+C +N +  + +    D  +P +FDN Y++ L
Sbjct: 207 VFNRIYTFNKTTKVDPTVNKDYVTELKASCPRNIDPRVAINM--DPTTPRQFDNVYYKNL 264

Query: 339 PRGLGLLRVDNMLVKDPRTKPLVDQYASN 367
            +G GL   D +L  D R+KP VD +A+N
Sbjct: 265 QQGKGLFTSDQVLFTDRRSKPTVDLWANN 293

Exhibits a Ca(2+)-pectate binding affinity which could be interpreted in vivo as a specificity to interact with the pectic structure of the cell wall.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: .

EC: 7

>sp|Q43873|PER73_ARATH Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=1 SV=1

 Score =  234 bits (596), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 121/269 (44%), Positives = 167/269 (62%), Gaps = 5/269 (1%)

Query: 102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN 161
           L+ ++Y  +CP+ E+IV++ V +K  Q+  T    LR+F HDCFV+GCD SV+I S   N
Sbjct: 27  LKTNFYGNSCPNVEQIVKKVVQEKIKQTFVTIPATLRLFFHDCFVNGCDASVMIQSTPTN 86

Query: 162 VAERDSDINLSLPGDAFDVVIKIKNALED--ACPGVVSCADILTASTRNLVVMAGGPRFN 219
            AE+D   N+SL GD FDVVIK K AL+   +C   VSCADIL  +TR++VV A GP + 
Sbjct: 87  KAEKDHPDNISLAGDGFDVVIKAKKALDAIPSCKNKVSCADILALATRDVVVAAKGPSYA 146

Query: 220 VSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKE 279
           V  GR DGLVS AA + GNLP  N  + E+ K+FA    + ++ +AL  AHT+GFAHC +
Sbjct: 147 VELGRFDGLVSTAASVNGNLPGPNNKVTELNKLFAKNKLTQEDMIALSAAHTLGFAHCGK 206

Query: 280 FSDRLFKFAPNQPTDPELNPKYAEALKAAC-KNHEQNITMTAFNDVMSPGKFDNSYFRGL 338
             +R++ F      DP LN  YA+ L+ AC K  +  I +    D  +P +FDN YF+ L
Sbjct: 207 VFNRIYNFNLTHAVDPTLNKAYAKELQLACPKTVDPRIAINM--DPTTPRQFDNIYFKNL 264

Query: 339 PRGLGLLRVDNMLVKDPRTKPLVDQYASN 367
            +G GL   D +L  D R+KP V+ +A N
Sbjct: 265 QQGKGLFTSDQVLFTDGRSKPTVNDWAKN 293

Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: .

EC: 7

>sp|Q96518|PER16_ARATH Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2

 Score =  229 bits (585), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 117/269 (43%), Positives = 167/269 (62%), Gaps = 7/269 (2%)

Query: 102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN 161
           L+ ++Y+ +CP+ E IVR  V QK  Q+  TA   LR+F HDCFV GCD S+L++S +  
Sbjct: 25  LQTNFYRKSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASILLASPS-- 82

Query: 162 VAERDSDINLSLPGDAFDVVIKIKNALED--ACPGVVSCADILTASTRNLVVMAGGPRFN 219
             E+D   + SL GD FD V K K AL+    C   VSCADIL  +TR++VV+ GGP + 
Sbjct: 83  --EKDHPDDKSLAGDGFDTVAKAKQALDRDPNCRNKVSCADILALATRDVVVLTGGPNYP 140

Query: 220 VSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKE 279
           V  GR+DG +S  A +  +LP  +  +D++  MFA  G S  + +AL GAHTIGFAHC +
Sbjct: 141 VELGRRDGRLSTVASVQHSLPQPSFKLDQLNTMFARHGLSQTDMIALSGAHTIGFAHCGK 200

Query: 280 FSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLP 339
           FS R++ F+P +P DP LN +YA  L+  C     ++ +    D  SP  FDN+YF+ L 
Sbjct: 201 FSKRIYNFSPKRPIDPTLNIRYALQLRQMCP-IRVDLRIAINMDPTSPNTFDNAYFKNLQ 259

Query: 340 RGLGLLRVDNMLVKDPRTKPLVDQYASNE 368
           +G+GL   D +L  D R++  V+ +AS+E
Sbjct: 260 KGMGLFTSDQVLFSDERSRSTVNSFASSE 288

Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: .

EC: 7

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	368
225457136	327	PREDICTED: peroxidase 65 [Vitis vinifera	0.744	0.837	0.605	1e-103
224121642	321	predicted protein [Populus trichocarpa]	0.755	0.866	0.611	1e-103
255540781	329	Peroxidase 65 precursor, putative [Ricin	0.736	0.823	0.634	1e-103
449469509	332	PREDICTED: peroxidase 65-like [Cucumis s	0.747	0.828	0.619	1e-101
253762020	330	peroxidase 65 [Brassica rapa]	0.739	0.824	0.617	3e-97
18422742	334	peroxidase 65 [Arabidopsis thaliana] gi|	0.744	0.820	0.609	1e-96
21593687	334	peroxidase [Arabidopsis thaliana]	0.744	0.820	0.609	1e-96
9759442	331	peroxidase [Arabidopsis thaliana]	0.744	0.827	0.609	1e-96
297790983	334	hypothetical protein ARALYDRAFT_494280 [	0.736	0.811	0.608	8e-96
358348267	847	4-coumarate-CoA ligase-like protein [Med	0.755	0.328	0.598	4e-95

>gi|225457136|ref|XP_002280359.1| PREDICTED: peroxidase 65 [Vitis vinifera] gi|147811771|emb|CAN68188.1| hypothetical protein VITISV_013676 [Vitis vinifera]

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 166/274 (60%), Positives = 219/274 (79%)

Query: 95  MPSAKPALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVL 154
           + S++  L  +YY+ +CP+FE+I+++ +  KQ  SP+TAAG LR+F HDC VDGCD SVL
Sbjct: 15  ISSSESKLNVNYYQKSCPNFERIMQDAITSKQINSPTTAAGTLRLFFHDCMVDGCDASVL 74

Query: 155 ISSNAFNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAG 214
           ISSNAFN AERD+DINLSLPGDAFD++++ K +LE  CPG+VSCADIL  +TR+LV M G
Sbjct: 75  ISSNAFNTAERDADINLSLPGDAFDLIVRAKTSLELTCPGIVSCADILALATRDLVTMVG 134

Query: 215 GPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGF 274
           GP ++V  GRKDGLVSQA+R+ GNLP  NMTMD+++ +FA+KGFSIQE VAL G HTIGF
Sbjct: 135 GPYYDVQLGRKDGLVSQASRVEGNLPRANMTMDQLIAIFAAKGFSIQEMVALSGGHTIGF 194

Query: 275 AHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSY 334
           +HCKEFS+R+F ++     DP  +PK+A+AL+  C N++++  M+AFNDVM+P KFDN Y
Sbjct: 195 SHCKEFSNRIFNYSSTSDIDPAFHPKFAQALRNVCANYQRDTAMSAFNDVMTPNKFDNMY 254

Query: 335 FRGLPRGLGLLRVDNMLVKDPRTKPLVDQYASNE 368
           ++ LPRGLGLL  DN+LV DPRTKP V+ YA+N+
Sbjct: 255 YQNLPRGLGLLSSDNVLVTDPRTKPFVELYATNQ 288

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224121642|ref|XP_002318634.1| predicted protein [Populus trichocarpa] gi|222859307|gb|EEE96854.1| predicted protein [Populus trichocarpa]

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 170/278 (61%), Positives = 212/278 (76%)

Query: 91  LASPMPSAKPALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCD 150
           L+ P   +K  L  DYYK +CP+FEKIVRE +  KQ  +P+TAAG LR+F HDC V+GCD
Sbjct: 7   LSIPFSESKSNLSFDYYKRSCPNFEKIVRETITTKQMSNPATAAGTLRLFFHDCMVEGCD 66

Query: 151 GSVLISSNAFNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLV 210
            SV I+SN+FN AERD+D+NLSL GD ++VVIK K  LE  CP VVSCADIL  +TR+LV
Sbjct: 67  ASVFIASNSFNTAERDADVNLSLSGDGYEVVIKAKTTLELTCPKVVSCADILAVATRDLV 126

Query: 211 VMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAH 270
            M GGP + +  GRKDGLVS+A+R+ GNLP +NM+M  ++ +FASKGF++QE VAL G H
Sbjct: 127 TMVGGPYYKIRLGRKDGLVSKASRVEGNLPRSNMSMTHVINLFASKGFNVQEMVALTGGH 186

Query: 271 TIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKF 330
           TIGF+HC EFSDRLF ++  Q TDPELN K+A  L+  C NH  + TM+AFNDV +PGKF
Sbjct: 187 TIGFSHCIEFSDRLFSYSKKQATDPELNSKFAAGLRNICANHTTDKTMSAFNDVFTPGKF 246

Query: 331 DNSYFRGLPRGLGLLRVDNMLVKDPRTKPLVDQYASNE 368
           DN YF+ LPRGLGLL  D+ LVKDPRTKP V+ YA+N+
Sbjct: 247 DNMYFKNLPRGLGLLAYDHALVKDPRTKPFVELYATNQ 284

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255540781|ref|XP_002511455.1| Peroxidase 65 precursor, putative [Ricinus communis] gi|223550570|gb|EEF52057.1| Peroxidase 65 precursor, putative [Ricinus communis]

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 172/271 (63%), Positives = 217/271 (80%)

Query: 98  AKPALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISS 157
           ++  L  DYYKT+CP F+ I+RE V  KQ+ +P+TAA  LRVF HDC V+GCD SVLI+S
Sbjct: 18  SESKLSIDYYKTSCPGFQDIIRETVTTKQSTNPTTAAATLRVFFHDCMVEGCDASVLIAS 77

Query: 158 NAFNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPR 217
           NAFN AERD+D+N +LPGDAFDVV++ K ALE  CP +VSCADIL  +TR+LV+M GGP 
Sbjct: 78  NAFNSAERDADLNHNLPGDAFDVVMRAKLALEVKCPKIVSCADILAQATRDLVLMVGGPF 137

Query: 218 FNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHC 277
           + V  GRKDGL+S+A+ + GNLPT NMTMD+++  F +KGF ++E VALMGAHTIGF+HC
Sbjct: 138 YPVRLGRKDGLISKASHVAGNLPTTNMTMDQMITYFRAKGFDVKEMVALMGAHTIGFSHC 197

Query: 278 KEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRG 337
           KEF+DRL+ +    PTDP LNPKYA ALK  C N+ ++ TM+AFNDV++PGKFDN YF+ 
Sbjct: 198 KEFADRLYHYNKKTPTDPGLNPKYAAALKTFCSNYTKDPTMSAFNDVLTPGKFDNMYFQN 257

Query: 338 LPRGLGLLRVDNMLVKDPRTKPLVDQYASNE 368
           LPRGLGLLR DN+LVKDPRTKP V+ YA+N+
Sbjct: 258 LPRGLGLLRSDNILVKDPRTKPFVELYAANQ 288

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449469509|ref|XP_004152462.1| PREDICTED: peroxidase 65-like [Cucumis sativus]

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 171/276 (61%), Positives = 210/276 (76%), Gaps = 1/276 (0%)

Query: 94  PMPS-AKPALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGS 152
           P PS     L   YY+ TCPDFEKI+RE V  KQ  SP TAAG LR+F HDC VDGCD S
Sbjct: 18  PFPSLVHSKLSLGYYQKTCPDFEKIIRETVTNKQITSPVTAAGTLRLFFHDCMVDGCDAS 77

Query: 153 VLISSNAFNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVM 212
           VLISSN+FN AER+++IN SL GDAFDVV+  K  LE ACPG+VSC+DIL  +TR+LVVM
Sbjct: 78  VLISSNSFNQAEREAEINHSLSGDAFDVVVHAKTNLELACPGIVSCSDILAQATRDLVVM 137

Query: 213 AGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTI 272
            GGP +NV  GRKDG++S+A  + GNLPT N TMD+++  F  +GF++QE VAL G HTI
Sbjct: 138 VGGPFYNVRLGRKDGMISKAGNVEGNLPTVNFTMDKLIDYFVERGFTVQELVALSGGHTI 197

Query: 273 GFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDN 332
           GF+HCKEF+DRLF  +P  PTDP++ PK+AE LK  C N+E++  M+AFNDV++PGKFDN
Sbjct: 198 GFSHCKEFTDRLFHHSPTSPTDPDIYPKFAEKLKTMCANYEKDTAMSAFNDVITPGKFDN 257

Query: 333 SYFRGLPRGLGLLRVDNMLVKDPRTKPLVDQYASNE 368
            +++ LPRGLGLL  DN L KDPRTKP VD YA N+
Sbjct: 258 MFYQNLPRGLGLLATDNALDKDPRTKPFVDLYAVNQ 293

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|253762020|gb|ACT35474.1| peroxidase 65 [Brassica rapa]

 Score =  361 bits (926), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 171/277 (61%), Positives = 211/277 (76%), Gaps = 5/277 (1%)

Query: 93  SPMPSAKPA-LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDG 151
           +P  SA  A LR DYY+ TCPDF KIVRE V  KQ+Q P+TAAG LR+F HDCF++GCD 
Sbjct: 19  APAVSADVAILRTDYYQKTCPDFNKIVREAVLTKQSQQPTTAAGTLRLFFHDCFLEGCDA 78

Query: 152 SVLISSNAFNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVV 211
           SVLI++N+FN AERD D+N SLPGDAFD+V +IK ALE +CPGVVSCADIL  +TR+LV 
Sbjct: 79  SVLIATNSFNKAERDDDLNDSLPGDAFDIVNRIKTALELSCPGVVSCADILAQATRDLVT 138

Query: 212 MAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHT 271
           M GGP F+V  GRKDGL S+A ++ GN+P  N T+ +I  MF   GFS++E VAL GAHT
Sbjct: 139 MVGGPYFDVKLGRKDGLESKAHKVRGNVPMPNQTVHDIHGMFKKNGFSLREMVALSGAHT 198

Query: 272 IGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFD 331
           IGF+HCKEFSDRL+        DPE+NP++A ALK  CKNH  + T+ AFNDVM+PGKFD
Sbjct: 199 IGFSHCKEFSDRLY----GSKADPEINPRFATALKELCKNHTVDDTIAAFNDVMTPGKFD 254

Query: 332 NSYFRGLPRGLGLLRVDNMLVKDPRTKPLVDQYASNE 368
           N YF+ L RGLGLL  D++L+KD  TKP V+ YA++E
Sbjct: 255 NMYFKNLKRGLGLLASDHLLIKDNSTKPFVELYATDE 291

Source: Brassica rapa

Species: Brassica rapa

Genus: Brassica

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18422742|ref|NP_568674.1| peroxidase 65 [Arabidopsis thaliana] gi|26397788|sp|Q9FJR1.2|PER65_ARATH RecName: Full=Peroxidase 65; Short=Atperox P65; AltName: Full=ATP43; Flags: Precursor gi|20260464|gb|AAM13130.1| peroxidase [Arabidopsis thaliana] gi|31711808|gb|AAP68260.1| At5g47000 [Arabidopsis thaliana] gi|332008073|gb|AED95456.1| peroxidase 65 [Arabidopsis thaliana]

 Score =  359 bits (922), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 170/279 (60%), Positives = 210/279 (75%), Gaps = 5/279 (1%)

Query: 91  LASPMPSAKPA-LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGC 149
           + +P+ SA  A LR DYY+ TCPDF KIVRE V  KQ Q P+TAAG LR+F HDCF++GC
Sbjct: 21  VVAPIISADVAILRTDYYQKTCPDFHKIVREAVTTKQVQQPTTAAGTLRLFFHDCFLEGC 80

Query: 150 DGSVLISSNAFNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNL 209
           D SVLI++N+FN AERD D+N SLPGDAFD+V +IK ALE +CPGVVSCADIL  +TR+L
Sbjct: 81  DASVLIATNSFNKAERDDDLNDSLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDL 140

Query: 210 VVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGA 269
           V M GGP F+V  GRKDG  S+A ++ GN+P  N T+ +I  +F   GFS++E VAL GA
Sbjct: 141 VTMVGGPYFDVKLGRKDGFESKAHKVRGNVPMANQTVPDIHGIFKKNGFSLREMVALSGA 200

Query: 270 HTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGK 329
           HTIGF+HCKEFSDRL+        D E+NP++A ALK  CKNH  + T+ AFNDVM+PGK
Sbjct: 201 HTIGFSHCKEFSDRLY----GSRADKEINPRFAAALKDLCKNHTVDDTIAAFNDVMTPGK 256

Query: 330 FDNSYFRGLPRGLGLLRVDNMLVKDPRTKPLVDQYASNE 368
           FDN YF+ L RGLGLL  D++L+KD  TKP VD YA+NE
Sbjct: 257 FDNMYFKNLKRGLGLLASDHILIKDNSTKPFVDLYATNE 295

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21593687|gb|AAM65654.1| peroxidase [Arabidopsis thaliana]

 Score =  359 bits (921), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 170/279 (60%), Positives = 210/279 (75%), Gaps = 5/279 (1%)

Query: 91  LASPMPSAKPA-LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGC 149
           + +P+ SA  A LR DYY+ TCPDF KIVRE V  KQ Q P+TAAG LR+F HDCF++GC
Sbjct: 21  VVAPIISADVAILRTDYYQKTCPDFHKIVREAVTTKQVQQPTTAAGTLRLFFHDCFLEGC 80

Query: 150 DGSVLISSNAFNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNL 209
           D SVLI++N+FN AERD D+N SLPGDAFD+V +IK ALE +CPGVVSCADIL  +TR+L
Sbjct: 81  DASVLIATNSFNKAERDDDLNDSLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDL 140

Query: 210 VVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGA 269
           V M GGP F+V  GRKDG  S+A ++ GN+P  N T+ +I  +F   GFS++E VAL GA
Sbjct: 141 VTMVGGPYFDVKLGRKDGFESKAHKVRGNVPMANQTVPDIHGIFKKNGFSLREMVALSGA 200

Query: 270 HTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGK 329
           HTIGF+HCKEFSDRL+        D E+NP++A ALK  CKNH  + T+ AFNDVM+PGK
Sbjct: 201 HTIGFSHCKEFSDRLY----GSRADKEINPRFAAALKDLCKNHTVDDTIAAFNDVMTPGK 256

Query: 330 FDNSYFRGLPRGLGLLRVDNMLVKDPRTKPLVDQYASNE 368
           FDN YF+ L RGLGLL  D++L+KD  TKP VD YA+NE
Sbjct: 257 FDNMYFKNLKRGLGLLASDHILIKDNSTKPFVDLYATNE 295

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|9759442|dbj|BAB10239.1| peroxidase [Arabidopsis thaliana]

 Score =  359 bits (921), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 170/279 (60%), Positives = 210/279 (75%), Gaps = 5/279 (1%)

Query: 91  LASPMPSAKPA-LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGC 149
           + +P+ SA  A LR DYY+ TCPDF KIVRE V  KQ Q P+TAAG LR+F HDCF++GC
Sbjct: 18  VVAPIISADVAILRTDYYQKTCPDFHKIVREAVTTKQVQQPTTAAGTLRLFFHDCFLEGC 77

Query: 150 DGSVLISSNAFNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNL 209
           D SVLI++N+FN AERD D+N SLPGDAFD+V +IK ALE +CPGVVSCADIL  +TR+L
Sbjct: 78  DASVLIATNSFNKAERDDDLNDSLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDL 137

Query: 210 VVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGA 269
           V M GGP F+V  GRKDG  S+A ++ GN+P  N T+ +I  +F   GFS++E VAL GA
Sbjct: 138 VTMVGGPYFDVKLGRKDGFESKAHKVRGNVPMANQTVPDIHGIFKKNGFSLREMVALSGA 197

Query: 270 HTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGK 329
           HTIGF+HCKEFSDRL+        D E+NP++A ALK  CKNH  + T+ AFNDVM+PGK
Sbjct: 198 HTIGFSHCKEFSDRLY----GSRADKEINPRFAAALKDLCKNHTVDDTIAAFNDVMTPGK 253

Query: 330 FDNSYFRGLPRGLGLLRVDNMLVKDPRTKPLVDQYASNE 368
           FDN YF+ L RGLGLL  D++L+KD  TKP VD YA+NE
Sbjct: 254 FDNMYFKNLKRGLGLLASDHILIKDNSTKPFVDLYATNE 292

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297790983|ref|XP_002863376.1| hypothetical protein ARALYDRAFT_494280 [Arabidopsis lyrata subsp. lyrata] gi|297309211|gb|EFH39635.1| hypothetical protein ARALYDRAFT_494280 [Arabidopsis lyrata subsp. lyrata]

 Score =  356 bits (914), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 168/276 (60%), Positives = 207/276 (75%), Gaps = 5/276 (1%)

Query: 94  PMPSAKPA-LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGS 152
           P  SA  A LR DYY+ TCPDF KIVRE V  KQ Q P+TAAG LR+F HDCF++GCD S
Sbjct: 24  PTISADVAILRTDYYQKTCPDFNKIVREAVTTKQVQQPTTAAGTLRLFFHDCFLEGCDAS 83

Query: 153 VLISSNAFNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVM 212
           VLI++N+FN AERD D+N SLPGDAFD+V +IK ALE +CPGVVSCADIL  +TR+LV M
Sbjct: 84  VLIATNSFNKAERDDDLNDSLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTM 143

Query: 213 AGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTI 272
            GGP F+V  GRKDG  S+A ++ GN+P  N T+ +I  +F   GF+++E VAL GAHTI
Sbjct: 144 VGGPYFDVKLGRKDGFESKAHKVRGNVPMANQTVPDIHGIFKKNGFTLREMVALSGAHTI 203

Query: 273 GFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDN 332
           GF+HCKEF+DRL+        D E+NP++A ALK  CKNH  + T+ AFNDVM+PGKFDN
Sbjct: 204 GFSHCKEFADRLY----GSKADKEINPRFAAALKDLCKNHTVDDTIAAFNDVMTPGKFDN 259

Query: 333 SYFRGLPRGLGLLRVDNMLVKDPRTKPLVDQYASNE 368
            YF+ L RGLGLL  D++L+KD  TKP VD YA+NE
Sbjct: 260 MYFKNLKRGLGLLASDHILIKDNSTKPFVDLYATNE 295

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358348267|ref|XP_003638169.1| 4-coumarate-CoA ligase-like protein [Medicago truncatula] gi|355504104|gb|AES85307.1| 4-coumarate-CoA ligase-like protein [Medicago truncatula]

 Score =  354 bits (908), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 167/279 (59%), Positives = 206/279 (73%), Gaps = 1/279 (0%)

Query: 91  LASPMPSAKPALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCD 150
           ++ P   +   L  DYYK TCPDFEKIVRE +  KQ+ SP+TA G LR+F HDC  DGCD
Sbjct: 11  ISLPFSFSSAELNIDYYKQTCPDFEKIVRENIFNKQSASPATAPGLLRLFFHDCITDGCD 70

Query: 151 GSVLISSNAFN-VAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNL 209
           GSVLISS A+N  AE+D++INLSL GD +DVV KIKNALE ACPGVVSC+DI+  +TR+L
Sbjct: 71  GSVLISSTAYNPHAEKDAEINLSLSGDGYDVVNKIKNALEIACPGVVSCSDIVAQATRDL 130

Query: 210 VVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGA 269
           V M GGP + V+ GRKD  VS+A+R    LPT  MTMD+I+  F  K F+I+E VAL GA
Sbjct: 131 VKMVGGPFYPVALGRKDSRVSEASRTEKALPTTKMTMDDIISKFTVKNFTIKEMVALTGA 190

Query: 270 HTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGK 329
           HTIGF HCKEFSDR+F F+    TDP L+PK A+ L+  CKN+  +  M AFNDV SPGK
Sbjct: 191 HTIGFTHCKEFSDRIFNFSKTSETDPTLHPKLAKGLREVCKNYTTDPNMAAFNDVRSPGK 250

Query: 330 FDNSYFRGLPRGLGLLRVDNMLVKDPRTKPLVDQYASNE 368
           FDN+Y++ + +GLGLLR D ML  DPRTKP+V+ YA +E
Sbjct: 251 FDNAYYQNVLKGLGLLRTDAMLGSDPRTKPIVELYARDE 289

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	368
TAIR|locus:2170997	334	AT5G47000 [Arabidopsis thalian	0.714	0.787	0.595	1.5e-83
TAIR|locus:2129386	326	AT4G17690 [Arabidopsis thalian	0.717	0.809	0.572	2.2e-80
TAIR|locus:2032392	326	AT1G24110 [Arabidopsis thalian	0.720	0.812	0.526	8.4e-74
TAIR|locus:2173757	328	AT5G40150 [Arabidopsis thalian	0.725	0.814	0.503	6.1e-71
TAIR|locus:2098308	316	AT3G28200 [Arabidopsis thalian	0.722	0.841	0.470	8.2e-67
TAIR|locus:2174693	330	AT5G14130 [Arabidopsis thalian	0.714	0.796	0.443	1.4e-57
TAIR|locus:2120061	329	AT4G37530 [Arabidopsis thalian	0.714	0.799	0.444	3.3e-56
TAIR|locus:2120051	329	AT4G37520 [Arabidopsis thalian	0.717	0.802	0.427	4.8e-55
TAIR|locus:2158227	329	RHS19 "root hair specific 19"	0.717	0.802	0.434	7e-54
TAIR|locus:2083088	329	AT3G49960 [Arabidopsis thalian	0.717	0.802	0.431	1e-52

TAIR|locus:2170997 AT5G47000 [Arabidopsis thaliana (taxid:3702)]

 Score = 837 (299.7 bits), Expect = 1.5e-83, P = 1.5e-83
 Identities = 159/267 (59%), Positives = 195/267 (73%)

Query:   102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN 161
             LR DYY+ TCPDF KIVRE V  KQ Q P+TAAG LR+F HDCF++GCD SVLI++N+FN
Sbjct:    33 LRTDYYQKTCPDFHKIVREAVTTKQVQQPTTAAGTLRLFFHDCFLEGCDASVLIATNSFN 92

Query:   162 VAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVS 221
              AERD D+N SLPGDAFD+V +IK ALE +CPGVVSCADIL  +TR+LV M GGP F+V 
Sbjct:    93 KAERDDDLNDSLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPYFDVK 152

Query:   222 FGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKEFS 281
              GRKDG  S+A ++ GN+P  N T+ +I  +F   GFS++E VAL GAHTIGF+HCKEFS
Sbjct:   153 LGRKDGFESKAHKVRGNVPMANQTVPDIHGIFKKNGFSLREMVALSGAHTIGFSHCKEFS 212

Query:   282 DRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFXXXXXX 341
             DRL+        D E+NP++A ALK  CKNH  + T+ AFNDVM+PGKFDN YF      
Sbjct:   213 DRLY----GSRADKEINPRFAAALKDLCKNHTVDDTIAAFNDVMTPGKFDNMYFKNLKRG 268

Query:   342 XXXXXVDNMLVKDPRTKPLVDQYASNE 368
                   D++L+KD  TKP VD YA+NE
Sbjct:   269 LGLLASDHILIKDNSTKPFVDLYATNE 295

GO:0004601 "peroxidase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006979 "response to oxidative stress" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009044 "xylan 1,4-beta-xylosidase activity" evidence=TAS

TAIR|locus:2129386 AT4G17690 [Arabidopsis thaliana (taxid:3702)]

 Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
 Identities = 154/269 (57%), Positives = 192/269 (71%)

Query:   100 PALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNA 159
             P L  DYY+ TCPDF KIVRE V  KQ Q P+TAAG LR+F HDCF++GCD SVLI++N+
Sbjct:    24 PNLTKDYYQKTCPDFNKIVRETVTPKQGQQPTTAAGTLRLFFHDCFMEGCDASVLIATNS 83

Query:   160 FNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFN 219
             FN AERD D+N SLPGDAFD+V +IK ALE +CPGVVSCADIL  +TR+LV M GGP + 
Sbjct:    84 FNKAERDDDLNESLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPFYE 143

Query:   220 VSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKE 279
             V  GRKDG  S+A ++ GNLP  N ++ ++L +F   GF+++E VAL G HTIGF+HCKE
Sbjct:   144 VKLGRKDGFESKAHKVKGNLPLANQSVPDMLSIFKKNGFTLKELVALSGGHTIGFSHCKE 203

Query:   280 FSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFXXXX 339
             FS+R+F   P    DPELN K+A  LK  CKN E N TM AF D ++PGKFDN YF    
Sbjct:   204 FSNRIF---PK--VDPELNAKFAGVLKDLCKNFETNKTMAAFLDPVTPGKFDNMYFKNLK 258

Query:   340 XXXXXXXVDNMLVKDPRTKPLVDQYASNE 368
                     D++L KDP T+P V+ YA+N+
Sbjct:   259 RGLGLLASDHILFKDPSTRPFVELYANNQ 287

GO:0004601 "peroxidase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006979 "response to oxidative stress" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

TAIR|locus:2032392 AT1G24110 [Arabidopsis thaliana (taxid:3702)]

 Score = 745 (267.3 bits), Expect = 8.4e-74, P = 8.4e-74
 Identities = 141/268 (52%), Positives = 182/268 (67%)

Query:   102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN 161
             L +DYY  TCP+FE+ + + V  KQ  +P+TA G LR+F HDC VDGCD S+L++S    
Sbjct:    22 LSSDYYTKTCPEFEETLVQIVTDKQIAAPTTAVGTLRLFFHDCMVDGCDASILVASTPRK 81

Query:   162 VAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVS 221
              +ERD+DIN SLPGDAFDV+ +IK A+E  CP +VSC+DIL  +TR+L+ M GGPR NV 
Sbjct:    82 TSERDADINRSLPGDAFDVITRIKTAVELKCPNIVSCSDILVGATRSLISMVGGPRVNVK 141

Query:   222 FGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKEFS 281
             FGRKD LVS   R+ G L   NMTMD I+ +F S G ++QE VAL+GAHTIGF+HCKEF+
Sbjct:   142 FGRKDSLVSDMNRVEGKLARPNMTMDHIISIFESSGLTVQEMVALVGAHTIGFSHCKEFA 201

Query:   282 DRLF-KFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFXXXXX 340
              R+F K   N P   E+NPKYA  L+  C N+  +  M+AFNDV +PGKFDN Y+     
Sbjct:   202 SRIFNKSDQNGPV--EMNPKYAAELRKLCANYTNDEQMSAFNDVFTPGKFDNMYYKNLKH 259

Query:   341 XXXXXXVDNMLVKDPRTKPLVDQYASNE 368
                    D+ +  D RT+ LVD YA +E
Sbjct:   260 GYGLLQSDHAIAFDNRTRSLVDLYAEDE 287

GO:0004601 "peroxidase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006979 "response to oxidative stress" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2173757 AT5G40150 [Arabidopsis thaliana (taxid:3702)]

 Score = 718 (257.8 bits), Expect = 6.1e-71, P = 6.1e-71
 Identities = 137/272 (50%), Positives = 185/272 (68%)

Query:    97 SAKPALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLIS 156
             +A+  L  D+Y  +CP F  I+RE +  KQ  +P+TAA ALR+F HDCF +GCD SVL+S
Sbjct:    27 AAESHLTVDFYSKSCPKFLDIIRETITNKQISTPTTAAAALRLFFHDCFPNGCDASVLVS 86

Query:   157 SNAFNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGP 216
             S AFN AERDS INLSLPGD FDVVI+ K ALE ACP  VSC+DI+  + R+L+V  GGP
Sbjct:    87 STAFNTAERDSSINLSLPGDGFDVVIRAKTALELACPNTVSCSDIIAVAVRDLLVTVGGP 146

Query:   217 RFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAH 276
              + +S GR+D   S+++ +   LP  +M + +++  F+S+GFS+QE VAL GAHTIGF+H
Sbjct:   147 YYEISLGRRDSRTSKSSLVSDLLPLPSMQISKLIDQFSSRGFSVQEMVALSGAHTIGFSH 206

Query:   277 CKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFX 336
             CKEF++R+    PN  T    NP++A ALK AC N + + T++ FNDVM+P KFDN YF 
Sbjct:   207 CKEFTNRV---NPNNSTG--YNPRFAVALKKACSNSKNDPTISVFNDVMTPNKFDNMYFQ 261

Query:   337 XXXXXXXXXXVDNMLVKDPRTKPLVDQYASNE 368
                        D+ L  DPRT+P V+ YA ++
Sbjct:   262 NIPKGLGLLESDHGLFSDPRTRPFVELYARDQ 293

GO:0004601 "peroxidase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006979 "response to oxidative stress" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2098308 AT3G28200 [Arabidopsis thaliana (taxid:3702)]

 Score = 679 (244.1 bits), Expect = 8.2e-67, P = 8.2e-67
 Identities = 128/272 (47%), Positives = 182/272 (66%)

Query:    97 SAKPALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLIS 156
             +A+  L  ++Y  TCP F  I+R+ +  KQ  +P+TAA  +R+F HDCF +GCD SVLIS
Sbjct:    16 TAQSRLTTNFYSKTCPRFLDIIRDTITNKQITNPTTAAAVIRLFFHDCFPNGCDASVLIS 75

Query:   157 SNAFNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGP 216
             S AFN AERDS INLSLPGD FDV+++ K ALE ACP  VSC+DI++ +TR+L++  GGP
Sbjct:    76 STAFNTAERDSSINLSLPGDGFDVIVRAKTALELACPNTVSCSDIISVATRDLLITVGGP 135

Query:   217 RFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAH 276
              ++V  GR+D   S+++ +   LP  +  + +I++ F SKGF++QE VAL GAH+IGF+H
Sbjct:   136 YYDVFLGRRDSRTSKSSLLTDLLPLPSTPISKIIQQFESKGFTVQEMVALSGAHSIGFSH 195

Query:   277 CKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFX 336
             CKEF  R+ +       +   NP++A ALK AC N+ ++ T++ FND+M+P KFDN Y+ 
Sbjct:   196 CKEFVGRVGR------NNTGYNPRFAVALKKACANYPKDPTISVFNDIMTPNKFDNMYYQ 249

Query:   337 XXXXXXXXXXVDNMLVKDPRTKPLVDQYASNE 368
                        D+ L  DPRT+  VD YA N+
Sbjct:   250 NLKKGLGLLESDHGLYSDPRTRYFVDLYAKNQ 281

GO:0004601 "peroxidase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006979 "response to oxidative stress" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005829 "cytosol" evidence=IDA

GO:0016126 "sterol biosynthetic process" evidence=RCA

TAIR|locus:2174693 AT5G14130 [Arabidopsis thaliana (taxid:3702)]

 Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
 Identities = 118/266 (44%), Positives = 165/266 (62%)

Query:   102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN 161
             L  +YY +TCP  E IV++ V  K  Q+ +TA   LR+F HDCFV+GCD SV I+S   +
Sbjct:    32 LSENYYASTCPSVELIVKQAVTTKFKQTVTTAPATLRMFFHDCFVEGCDASVFIASENED 91

Query:   162 VAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVS 221
              AE+D+D N SL GD FD VIK K A+E  CPGVVSCADIL  + R++VV+ GGP F V 
Sbjct:    92 -AEKDADDNKSLAGDGFDTVIKAKTAVESQCPGVVSCADILALAARDVVVLVGGPEFKVE 150

Query:   222 FGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKEFS 281
              GR+DGLVS+A+R+ G LP   + +  ++++FAS G S+ + +AL GAHTIG +HC  F+
Sbjct:   151 LGRRDGLVSKASRVTGKLPEPGLDVRGLVQIFASNGLSLTDMIALSGAHTIGSSHCNRFA 210

Query:   282 DRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFXXXXXX 341
             +RL  F+   P DP ++P YA+ L  AC +   +  +    D+ S   FDNSY+      
Sbjct:   211 NRLHNFSTFMPVDPTMDPVYAQQLIQACSDPNPDAVVDI--DLTSRDTFDNSYYQNLVAR 268

Query:   342 XXXXXVDNMLVKDPRTKPLVDQYASN 367
                   D  L  D  ++  V ++A+N
Sbjct:   269 KGLFTSDQALFNDLSSQATVVRFANN 294

GO:0004601 "peroxidase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006979 "response to oxidative stress" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2120061 AT4G37530 [Arabidopsis thaliana (taxid:3702)]

 Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
 Identities = 120/270 (44%), Positives = 164/270 (60%)

Query:   102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN 161
             LR D+Y  TCP+ E+IVR  V +K  Q+ +T    LR++ HDCFV+GCD SV+I+S   N
Sbjct:    27 LRGDFYAGTCPNVEQIVRNAVQKKIQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNTN 86

Query:   162 VAERDSDINLSLPGDAFDVVIKIKNALEDA--CPGVVSCADILTASTRNLVVMAGGPRFN 219
              AE+D + NLSL GD FD VIK K A++    C   VSCADILT +TR++V +AGGP++ 
Sbjct:    87 KAEKDHEDNLSLAGDGFDTVIKAKEAVDAVPNCRNKVSCADILTMATRDVVNLAGGPQYA 146

Query:   220 VSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKE 279
             V  GR+DGL S A+ + G LP     ++++  +FA  G S  + +AL GAHT+GFAHC +
Sbjct:   147 VELGRRDGLSSSASSVTGKLPKPTFDLNQLNALFAENGLSPNDMIALSGAHTLGFAHCTK 206

Query:   280 FSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNIT-MTAFN-DVMSPGKFDNSYFXX 337
               +RL+ F      DP +N  Y   LKA+C    QNI    A N D  +P +FDN Y+  
Sbjct:   207 VFNRLYNFNKTNNVDPTINKDYVTELKASCP---QNIDPRVAINMDPNTPRQFDNVYYKN 263

Query:   338 XXXXXXXXXVDNMLVKDPRTKPLVDQYASN 367
                       D +L  D R+KP VD +A+N
Sbjct:   264 LQQGKGLFTSDQVLFTDSRSKPTVDLWANN 293

GO:0004601 "peroxidase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006979 "response to oxidative stress" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009651 "response to salt stress" evidence=IEP

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2120051 AT4G37520 [Arabidopsis thaliana (taxid:3702)]

 Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
 Identities = 115/269 (42%), Positives = 165/269 (61%)

Query:   102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN 161
             LR ++Y  +CP+ E+IVR  V +K  Q+ +T    LR++ HDCFV+GCD SV+I+S   N
Sbjct:    27 LRRNFYAGSCPNVEQIVRNAVQKKVQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNNN 86

Query:   162 VAERDSDINLSLPGDAFDVVIKIKNALEDA--CPGVVSCADILTASTRNLVVMAGGPRFN 219
              AE+D + NLSL GD FD VIK K AL+    C   VSCADILT +TR++V +AGGP+++
Sbjct:    87 KAEKDHEENLSLAGDGFDTVIKAKEALDAVPNCRNKVSCADILTMATRDVVNLAGGPQYD 146

Query:   220 VSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKE 279
             V  GR DGL S AA + G LP     ++++  +FA  G S+ + +AL GAHT+GFAHC +
Sbjct:   147 VELGRLDGLSSTAASVGGKLPHPTDDVNKLTSLFAKNGLSLNDMIALSGAHTLGFAHCTK 206

Query:   280 FSDRLFKFAPNQPTDPELNPKYAEALKAAC-KNHEQNITMTAFNDVMSPGKFDNSYFXXX 338
               +R++ F      DP +N  Y   LKA+C +N +  + +    D  +P +FDN Y+   
Sbjct:   207 VFNRIYTFNKTTKVDPTVNKDYVTELKASCPRNIDPRVAINM--DPTTPRQFDNVYYKNL 264

Query:   339 XXXXXXXXVDNMLVKDPRTKPLVDQYASN 367
                      D +L  D R+KP VD +A+N
Sbjct:   265 QQGKGLFTSDQVLFTDRRSKPTVDLWANN 293

GO:0004601 "peroxidase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006979 "response to oxidative stress" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2158227 RHS19 "root hair specific 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
 Identities = 117/269 (43%), Positives = 161/269 (59%)

Query:   102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN 161
             L+ ++Y  +CP+ E+IV++ V +K  Q+  T    LR+F HDCFV+GCD SV+I S   N
Sbjct:    27 LKTNFYGNSCPNVEQIVKKVVQEKIKQTFVTIPATLRLFFHDCFVNGCDASVMIQSTPTN 86

Query:   162 VAERDSDINLSLPGDAFDVVIKIKNALE--DACPGVVSCADILTASTRNLVVMAGGPRFN 219
              AE+D   N+SL GD FDVVIK K AL+   +C   VSCADIL  +TR++VV A GP + 
Sbjct:    87 KAEKDHPDNISLAGDGFDVVIKAKKALDAIPSCKNKVSCADILALATRDVVVAAKGPSYA 146

Query:   220 VSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKE 279
             V  GR DGLVS AA + GNLP  N  + E+ K+FA    + ++ +AL  AHT+GFAHC +
Sbjct:   147 VELGRFDGLVSTAASVNGNLPGPNNKVTELNKLFAKNKLTQEDMIALSAAHTLGFAHCGK 206

Query:   280 FSDRLFKFAPNQPTDPELNPKYAEALKAAC-KNHEQNITMTAFNDVMSPGKFDNSYFXXX 338
               +R++ F      DP LN  YA+ L+ AC K  +  I +    D  +P +FDN YF   
Sbjct:   207 VFNRIYNFNLTHAVDPTLNKAYAKELQLACPKTVDPRIAINM--DPTTPRQFDNIYFKNL 264

Query:   339 XXXXXXXXVDNMLVKDPRTKPLVDQYASN 367
                      D +L  D R+KP V+ +A N
Sbjct:   265 QQGKGLFTSDQVLFTDGRSKPTVNDWAKN 293

GO:0004601 "peroxidase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006979 "response to oxidative stress" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0010054 "trichoblast differentiation" evidence=RCA

TAIR|locus:2083088 AT3G49960 [Arabidopsis thaliana (taxid:3702)]

 Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
 Identities = 116/269 (43%), Positives = 159/269 (59%)

Query:   102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN 161
             L   +Y  TCP+ E+IVR  V +K  ++       LR+F HDCFV+GCD SV+I S   N
Sbjct:    27 LSRGFYSKTCPNVEQIVRNAVQKKIKKTFVAVPATLRLFFHDCFVNGCDASVMIQSTPKN 86

Query:   162 VAERDSDINLSLPGDAFDVVIKIKNALED--ACPGVVSCADILTASTRNLVVMAGGPRFN 219
              AE+D   N+SL GD FDVVI+ K AL+   +C   VSCADILT +TR++VV AGGP + 
Sbjct:    87 KAEKDHPDNISLAGDGFDVVIQAKKALDSNPSCRNKVSCADILTLATRDVVVAAGGPSYE 146

Query:   220 VSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKE 279
             V  GR DGLVS A+ + GNLP  +  +D++  +F     + ++ +AL  AHT+GFAHC +
Sbjct:   147 VELGRFDGLVSTASSVEGNLPGPSDNVDKLNALFTKNKLTQEDMIALSAAHTLGFAHCGK 206

Query:   280 FSDRLFKFAPNQPTDPELNPKYAEALKAAC-KNHEQNITMTAFNDVMSPGKFDNSYFXXX 338
                R+ KF      DP LN  YA  L+ AC KN +  I +    D ++P  FDN+YF   
Sbjct:   207 VFKRIHKFNGINSVDPTLNKAYAIELQKACPKNVDPRIAINM--DPVTPKTFDNTYFKNL 264

Query:   339 XXXXXXXXVDNMLVKDPRTKPLVDQYASN 367
                      D +L  D R++P V+ +ASN
Sbjct:   265 QQGKGLFTSDQVLFTDGRSRPTVNAWASN 293

GO:0004601 "peroxidase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006979 "response to oxidative stress" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0010054 "trichoblast differentiation" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9FJR1	PER65_ARATH	1, ., 1, 1, ., 1, ., 7	0.6093	0.7445	0.8203	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	1.11.1.7	0.914
3rd Layer	1.11.1	0.921

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	gw1.XII.71.1	hypothetical protein (321 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.XIV.3012.1	aspartate transaminase (EC-2.6.1.1) (403 aa)						•			0.899
	gw1.VI.2755.1	aspartate transaminase (EC-2.6.1.1) (397 aa)						•			0.899
	gw1.41.216.1	histidinol-phosphate aminotransferase (366 aa)						•			0.899
	gw1.28.655.1	annotation not avaliable (78 aa)						•			0.899
	f5h	SubName- Full=Ferulate-5-hydroxylase; Flags- Precursor; (501 aa)						•			0.899
	grail3.0013044701	aspartate transaminase (EC-2.6.1.1) (466 aa)						•			0.899
	PAL	RecName- Full=Phenylalanine ammonia-lyase; EC=4.3.1.24;; This is a key enzyme of plant metaboli [...] (715 aa)						•			0.899
	SAD	SubName- Full=Cinnamyl alcohol dehydrogenase; (362 aa)						•			0.899
	fgenesh4_pg.C_scaffold_803000002	hypothetical protein (316 aa)						•			0.899
	AMT7	aminotransferase family protein (EC-2.6.1.5) (407 aa)						•			0.899

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	368
cd00693	298	cd00693, secretory_peroxidase, Horseradish peroxid	1e-128
PLN03030	324	PLN03030, PLN03030, cationic peroxidase; Provision	2e-56
pfam00141	180	pfam00141, peroxidase, Peroxidase	4e-55
cd00691	253	cd00691, ascorbate_peroxidase, Ascorbate peroxidas	9e-17
cd00314	255	cd00314, plant_peroxidase_like, Heme-dependent per	5e-14
PLN02608	289	PLN02608, PLN02608, L-ascorbate peroxidase	8e-09
PRK14951	618	PRK14951, PRK14951, DNA polymerase III subunits ga	1e-07
PRK12270	1228	PRK12270, kgd, alpha-ketoglutarate decarboxylase;	2e-07
PLN02879	251	PLN02879, PLN02879, L-ascorbate peroxidase	3e-07
PHA03247	3151	PHA03247, PHA03247, large tegument protein UL36; P	4e-07
PRK11633	226	PRK11633, PRK11633, cell division protein DedD; Pr	5e-07
cd00692	328	cd00692, ligninase, Ligninase and other manganese-	7e-07
PRK14951	618	PRK14951, PRK14951, DNA polymerase III subunits ga	8e-07
PRK07764	824	PRK07764, PRK07764, DNA polymerase III subunits ga	8e-07
PRK12270	1228	PRK12270, kgd, alpha-ketoglutarate decarboxylase;	1e-06
PRK12270	1228	PRK12270, kgd, alpha-ketoglutarate decarboxylase;	2e-06
PHA03247	3151	PHA03247, PHA03247, large tegument protein UL36; P	2e-06
PRK07764	824	PRK07764, PRK07764, DNA polymerase III subunits ga	3e-06
PRK07764	824	PRK07764, PRK07764, DNA polymerase III subunits ga	3e-06
PRK11633	226	PRK11633, PRK11633, cell division protein DedD; Pr	4e-06
PRK07764	824	PRK07764, PRK07764, DNA polymerase III subunits ga	4e-06
PRK11633	226	PRK11633, PRK11633, cell division protein DedD; Pr	5e-06
PRK07764	824	PRK07764, PRK07764, DNA polymerase III subunits ga	5e-06
PRK12270	1228	PRK12270, kgd, alpha-ketoglutarate decarboxylase;	6e-06
PRK12270	1228	PRK12270, kgd, alpha-ketoglutarate decarboxylase;	6e-06
PHA03247	3151	PHA03247, PHA03247, large tegument protein UL36; P	6e-06
PRK07994	647	PRK07994, PRK07994, DNA polymerase III subunits ga	6e-06
PRK12270	1228	PRK12270, kgd, alpha-ketoglutarate decarboxylase;	8e-06
PRK14951	618	PRK14951, PRK14951, DNA polymerase III subunits ga	1e-05
PRK11633	226	PRK11633, PRK11633, cell division protein DedD; Pr	1e-05
PRK12270	1228	PRK12270, kgd, alpha-ketoglutarate decarboxylase;	2e-05
PRK12323	700	PRK12323, PRK12323, DNA polymerase III subunits ga	2e-05
PRK12323	700	PRK12323, PRK12323, DNA polymerase III subunits ga	2e-05
pfam07174	297	pfam07174, FAP, Fibronectin-attachment protein (FA	2e-05
PRK14950	585	PRK14950, PRK14950, DNA polymerase III subunits ga	2e-05
PRK07764	824	PRK07764, PRK07764, DNA polymerase III subunits ga	3e-05
PRK12323	700	PRK12323, PRK12323, DNA polymerase III subunits ga	3e-05
PHA03269	566	PHA03269, PHA03269, envelope glycoprotein C; Provi	3e-05
TIGR02927	579	TIGR02927, SucB_Actino, 2-oxoglutarate dehydrogena	3e-05
PRK07003	830	PRK07003, PRK07003, DNA polymerase III subunits ga	3e-05
PRK14971	614	PRK14971, PRK14971, DNA polymerase III subunits ga	4e-05
PHA03247	3151	PHA03247, PHA03247, large tegument protein UL36; P	5e-05
PRK07764	824	PRK07764, PRK07764, DNA polymerase III subunits ga	6e-05
PRK12323	700	PRK12323, PRK12323, DNA polymerase III subunits ga	6e-05
PLN02364	250	PLN02364, PLN02364, L-ascorbate peroxidase 1	6e-05
PRK07764	824	PRK07764, PRK07764, DNA polymerase III subunits ga	7e-05
PRK07764	824	PRK07764, PRK07764, DNA polymerase III subunits ga	7e-05
PRK14950	585	PRK14950, PRK14950, DNA polymerase III subunits ga	7e-05
PRK12323	700	PRK12323, PRK12323, DNA polymerase III subunits ga	8e-05
TIGR02927	579	TIGR02927, SucB_Actino, 2-oxoglutarate dehydrogena	8e-05
PRK14971	614	PRK14971, PRK14971, DNA polymerase III subunits ga	8e-05
PRK11633	226	PRK11633, PRK11633, cell division protein DedD; Pr	9e-05
PRK12270	1228	PRK12270, kgd, alpha-ketoglutarate decarboxylase;	1e-04
PHA03247	3151	PHA03247, PHA03247, large tegument protein UL36; P	1e-04
PRK07764	824	PRK07764, PRK07764, DNA polymerase III subunits ga	1e-04
PRK14971	614	PRK14971, PRK14971, DNA polymerase III subunits ga	1e-04
PRK14948	620	PRK14948, PRK14948, DNA polymerase III subunits ga	1e-04
PHA03307	1352	PHA03307, PHA03307, transcriptional regulator ICP4	1e-04
PTZ00144	418	PTZ00144, PTZ00144, dihydrolipoamide succinyltrans	1e-04
PRK10819	246	PRK10819, PRK10819, transport protein TonB; Provis	1e-04
PRK07994	647	PRK07994, PRK07994, DNA polymerase III subunits ga	2e-04
PRK14948	620	PRK14948, PRK14948, DNA polymerase III subunits ga	2e-04
PRK14948	620	PRK14948, PRK14948, DNA polymerase III subunits ga	2e-04
pfam05887	145	pfam05887, Trypan_PARP, Procyclic acidic repetitiv	2e-04
PRK10856	331	PRK10856, PRK10856, cytoskeletal protein RodZ; Pro	2e-04
pfam11914	100	pfam11914, DUF3432, Domain of unknown function (DU	2e-04
PHA03247	3151	PHA03247, PHA03247, large tegument protein UL36; P	3e-04
PRK07003	830	PRK07003, PRK07003, DNA polymerase III subunits ga	3e-04
PRK07003	830	PRK07003, PRK07003, DNA polymerase III subunits ga	3e-04
PRK14971	614	PRK14971, PRK14971, DNA polymerase III subunits ga	3e-04
PRK10819	246	PRK10819, PRK10819, transport protein TonB; Provis	3e-04
PRK14965	576	PRK14965, PRK14965, DNA polymerase III subunits ga	3e-04
PRK03427	333	PRK03427, PRK03427, cell division protein ZipA; Pr	3e-04
PRK12323	700	PRK12323, PRK12323, DNA polymerase III subunits ga	4e-04
PHA03307	1352	PHA03307, PHA03307, transcriptional regulator ICP4	4e-04
pfam05687	151	pfam05687, DUF822, Plant protein of unknown functi	4e-04
pfam05687	151	pfam05687, DUF822, Plant protein of unknown functi	4e-04
PRK14954	620	PRK14954, PRK14954, DNA polymerase III subunits ga	4e-04
PHA03247	3151	PHA03247, PHA03247, large tegument protein UL36; P	5e-04
PHA03247	3151	PHA03247, PHA03247, large tegument protein UL36; P	5e-04
PRK09111	598	PRK09111, PRK09111, DNA polymerase III subunits ga	5e-04
PRK14948	620	PRK14948, PRK14948, DNA polymerase III subunits ga	6e-04
pfam05887	145	pfam05887, Trypan_PARP, Procyclic acidic repetitiv	6e-04
PRK00404	141	PRK00404, tatB, sec-independent translocase; Provi	6e-04
TIGR00601	378	TIGR00601, rad23, UV excision repair protein Rad23	6e-04
PRK07764	824	PRK07764, PRK07764, DNA polymerase III subunits ga	8e-04
PRK14954	620	PRK14954, PRK14954, DNA polymerase III subunits ga	8e-04
PRK14951	618	PRK14951, PRK14951, DNA polymerase III subunits ga	9e-04
PRK07764	824	PRK07764, PRK07764, DNA polymerase III subunits ga	9e-04
PHA03247	3151	PHA03247, PHA03247, large tegument protein UL36; P	0.001
PHA03247	3151	PHA03247, PHA03247, large tegument protein UL36; P	0.001
PRK07003	830	PRK07003, PRK07003, DNA polymerase III subunits ga	0.001
pfam05887	145	pfam05887, Trypan_PARP, Procyclic acidic repetitiv	0.001
PLN02983	274	PLN02983, PLN02983, biotin carboxyl carrier protei	0.001
pfam04652	315	pfam04652, DUF605, Vta1 like	0.001
pfam04652	315	pfam04652, DUF605, Vta1 like	0.001
pfam05616	502	pfam05616, Neisseria_TspB, Neisseria meningitidis	0.001
PLN02217	670	PLN02217, PLN02217, probable pectinesterase/pectin	0.001
PRK09752	1250	PRK09752, PRK09752, adhesin; Provisional	0.001
PRK14963	504	PRK14963, PRK14963, DNA polymerase III subunits ga	0.001
PHA03247	3151	PHA03247, PHA03247, large tegument protein UL36; P	0.002
PHA03247	3151	PHA03247, PHA03247, large tegument protein UL36; P	0.002
PHA03247	3151	PHA03247, PHA03247, large tegument protein UL36; P	0.002
PHA03247	3151	PHA03247, PHA03247, large tegument protein UL36; P	0.002
PRK14950	585	PRK14950, PRK14950, DNA polymerase III subunits ga	0.002
PRK10819	246	PRK10819, PRK10819, transport protein TonB; Provis	0.002
PRK03427	333	PRK03427, PRK03427, cell division protein ZipA; Pr	0.002
TIGR00601	378	TIGR00601, rad23, UV excision repair protein Rad23	0.002
PRK14963	504	PRK14963, PRK14963, DNA polymerase III subunits ga	0.002
PRK12373	400	PRK12373, PRK12373, NADH dehydrogenase subunit E;	0.002
cd08201	264	cd08201, plant_peroxidase_like_1, Uncharacterized	0.002
PRK06995	484	PRK06995, flhF, flagellar biosynthesis regulator F	0.002
PTZ00449	943	PTZ00449, PTZ00449, 104 kDa microneme/rhoptry anti	0.002
PHA03201	318	PHA03201, PHA03201, uracil DNA glycosylase; Provis	0.002
PHA03247	3151	PHA03247, PHA03247, large tegument protein UL36; P	0.003
PHA03247	3151	PHA03247, PHA03247, large tegument protein UL36; P	0.003
PHA03247	3151	PHA03247, PHA03247, large tegument protein UL36; P	0.003
PRK07764	824	PRK07764, PRK07764, DNA polymerase III subunits ga	0.003
PRK07764	824	PRK07764, PRK07764, DNA polymerase III subunits ga	0.003
PRK12323	700	PRK12323, PRK12323, DNA polymerase III subunits ga	0.003
PRK12323	700	PRK12323, PRK12323, DNA polymerase III subunits ga	0.003
PRK07003	830	PRK07003, PRK07003, DNA polymerase III subunits ga	0.003
PRK14948	620	PRK14948, PRK14948, DNA polymerase III subunits ga	0.003
PRK14948	620	PRK14948, PRK14948, DNA polymerase III subunits ga	0.003
PHA03307	1352	PHA03307, PHA03307, transcriptional regulator ICP4	0.003
PRK14965	576	PRK14965, PRK14965, DNA polymerase III subunits ga	0.003
PRK14965	576	PRK14965, PRK14965, DNA polymerase III subunits ga	0.003
pfam05687	151	pfam05687, DUF822, Plant protein of unknown functi	0.003
pfam04652	315	pfam04652, DUF605, Vta1 like	0.003
PRK06995	484	PRK06995, flhF, flagellar biosynthesis regulator F	0.003
COG0810	244	COG0810, TonB, Periplasmic protein TonB, links inn	0.003
PHA03247	3151	PHA03247, PHA03247, large tegument protein UL36; P	0.004
PHA03247	3151	PHA03247, PHA03247, large tegument protein UL36; P	0.004
PRK07994	647	PRK07994, PRK07994, DNA polymerase III subunits ga	0.004
PHA03269	566	PHA03269, PHA03269, envelope glycoprotein C; Provi	0.004
pfam05616	502	pfam05616, Neisseria_TspB, Neisseria meningitidis	0.004
PRK06975	656	PRK06975, PRK06975, bifunctional uroporphyrinogen-	0.004
PRK06975	656	PRK06975, PRK06975, bifunctional uroporphyrinogen-	0.004
COG3147	226	COG3147, DedD, Uncharacterized protein conserved i	0.004

>gnl|CDD|173827 cd00693, secretory_peroxidase, Horseradish peroxidase and related secretory plant peroxidases

 Score =  369 bits (950), Expect = e-128
 Identities = 126/267 (47%), Positives = 166/267 (62%), Gaps = 4/267 (1%)

Query: 102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN 161
           L   +Y  +CP+ E IVR  V       P  AA  LR+  HDCFV GCD SVL+ S A N
Sbjct: 2   LSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTANN 61

Query: 162 VAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVS 221
            +E+D+  NLSL    FDV+  IK ALE ACPGVVSCADIL  + R+ VV+AGGP + V 
Sbjct: 62  TSEKDAPPNLSL--RGFDVIDDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVP 119

Query: 222 FGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKEFS 281
            GR+DG VS A  + GNLP+   ++ +++ +FASKG ++ + VAL GAHTIG AHC  FS
Sbjct: 120 LGRRDGRVSSANDV-GNLPSPFFSVSQLISLFASKGLTVTDLVALSGAHTIGRAHCSSFS 178

Query: 282 DRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLPRG 341
           DRL+ F+     DP L+P YA  L+  C     +       D  +P  FDNSY++ L  G
Sbjct: 179 DRLYNFSGTGDPDPTLDPAYAAQLRKKCPAGGDD-DTLVPLDPGTPNTFDNSYYKNLLAG 237

Query: 342 LGLLRVDNMLVKDPRTKPLVDQYASNE 368
            GLL  D  L+ DPRT+ +V++YA+N+
Sbjct: 238 RGLLTSDQALLSDPRTRAIVNRYAANQ 264

Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. Length = 298

>gnl|CDD|215545 PLN03030, PLN03030, cationic peroxidase; Provisional

 Score =  187 bits (475), Expect = 2e-56
 Identities = 103/263 (39%), Positives = 140/263 (53%), Gaps = 8/263 (3%)

Query: 103 RADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFNV 162
           R  +Y TTCP  E IVR+ V      +P+ A G LR+  HDCFV GCD S+LI  +    
Sbjct: 26  RVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGSN--- 82

Query: 163 AERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSF 222
            E+ +  NL L G  +DV+   K  LE ACPGVVSCADIL  + R+ VV+  G  + V  
Sbjct: 83  TEKTALPNLLLRG--YDVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPT 140

Query: 223 GRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKEFSD 282
           GR+DG VS A+    NLP    ++D   + FA+KG + Q+ V L+G HTIG   C+ F  
Sbjct: 141 GRRDGRVSLASDA-SNLPGFTDSIDVQKQKFAAKGLNTQDLVTLVGGHTIGTTACQFFRY 199

Query: 283 RLFKFAPN-QPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLPRG 341
           RL+ F       DP ++  +   L+A C  +       A  D  S  +FD S+F  L  G
Sbjct: 200 RLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGSRRIAL-DTGSSNRFDASFFSNLKNG 258

Query: 342 LGLLRVDNMLVKDPRTKPLVDQY 364
            G+L  D  L  D  T+  V ++
Sbjct: 259 RGILESDQKLWTDASTRTFVQRF 281

Length = 324

>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase

 Score =  178 bits (454), Expect = 4e-55
 Identities = 69/155 (44%), Positives = 88/155 (56%), Gaps = 6/155 (3%)

Query: 118 VREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFNVAERDSDINLSLPGDA 177
           VR  V       P+     LR+  HDCFV GCDGSVL+        E+D+  N  L    
Sbjct: 1   VRADVRAAFKADPTMGPSLLRLHFHDCFVGGCDGSVLLD----FEPEKDAPPNAGL-RKG 55

Query: 178 FDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIPG 237
           FDV+  IK  LE ACPGVVSCADI+  + R+ V +AGGP + V  GR+DG VS A     
Sbjct: 56  FDVLDPIKAKLEAACPGVVSCADIIALAARDAVELAGGPIWPVPLGRRDGTVSSAD-DAS 114

Query: 238 NLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTI 272
           NLP  + + D++   FA KG + ++ VAL GAHT 
Sbjct: 115 NLPDPDDSADQLRDRFARKGLTDEDLVALSGAHTK 149

Length = 180

>gnl|CDD|173825 cd00691, ascorbate_peroxidase, Ascorbate peroxidases and cytochrome C peroxidases

 Score = 78.8 bits (195), Expect = 9e-17
 Identities = 53/182 (29%), Positives = 73/182 (40%), Gaps = 47/182 (25%)

Query: 196 VSCADILT-ASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFA 254
           +S AD+   A    +  M GGP+     GR D    +     G LP  +   D +  +F 
Sbjct: 88  ISYADLWQLAGVVAIEEM-GGPKIPFRPGRVDASDPEECPPEGRLPDASKGADHLRDVFY 146

Query: 255 SKGFSIQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQ 314
             GF+ QE VAL GAHT+G  H KE S     +  N                        
Sbjct: 147 RMGFNDQEIVALSGAHTLGRCH-KERSGYDGPWTKN------------------------ 181

Query: 315 NITMTAFNDVMSPGKFDNSYFRGLPR--------GLGLLRVDNMLVKDPRTKPLVDQYAS 366
                       P KFDNSYF+ L          GL +L  D  L++DP+ +P V+ YA 
Sbjct: 182 ------------PLKFDNSYFKELLEEDWKLPTPGLLMLPTDKALLEDPKFRPYVELYAK 229

Query: 367 NE 368
           ++
Sbjct: 230 DQ 231

Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water. Length = 253

>gnl|CDD|173823 cd00314, plant_peroxidase_like, Heme-dependent peroxidases similar to plant peroxidases

 Score = 71.0 bits (174), Expect = 5e-14
 Identities = 69/274 (25%), Positives = 98/274 (35%), Gaps = 78/274 (28%)

Query: 127 TQSPSTAAGALRVFMHDCFVD--------GCDGSVLISSNAFNVAERDSDINLSLPGDAF 178
           TQ+ + A   LR+  HD            G DGS+          +R  +  L     A 
Sbjct: 12  TQAGALAGSLLRLAFHDAGTYDIADGKGGGADGSI----RFEPELDRPENGGLD---KAL 64

Query: 179 DVVIKIKNALEDACPGVVSCADIL----TASTRNLVVMAGGPRFNVSFGRKDGLVSQAAR 234
             +  IK+A +   P  VS AD++      +  +     GGP     FGR D        
Sbjct: 65  RALEPIKSAYDGGNP--VSRADLIALAGAVAVESTF--GGGPLIPFRFGRLDATEPDLGV 120

Query: 235 I--PGNLPTNNMTMDEILKMFASKGFSIQEYVALM-GAHTI-GFAHCKEFSDRLFKFAPN 290
               G LP    +  E+   F   G S  E VAL  GAHT+ G  H              
Sbjct: 121 PDPEGLLPNETSSATELRDKFKRMGLSPSELVALSAGAHTLGGKNHG------------- 167

Query: 291 QPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGL------------ 338
                               N+E +   T+     +P  FDN+YF+ L            
Sbjct: 168 -----------------DLLNYEGSGLWTS-----TPFTFDNAYFKNLLDMNWEWRVGSP 205

Query: 339 ----PRGLGLLRVDNMLVKDPRTKPLVDQYASNE 368
                +G GLL  D  L+ D  T+ LV++YAS++
Sbjct: 206 DPDGVKGPGLLPSDYALLSDSETRALVERYASDQ 239

Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. Length = 255

>gnl|CDD|178218 PLN02608, PLN02608, L-ascorbate peroxidase

 Score = 55.9 bits (135), Expect = 8e-09
 Identities = 50/163 (30%), Positives = 64/163 (39%), Gaps = 44/163 (26%)

Query: 210 VVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGA 269
           V + GGP  +   GRKD   S A    G LP        +  +F   G S ++ VAL G 
Sbjct: 103 VEVTGGPTIDFVPGRKD---SNACPEEGRLPDAKKGAKHLRDVFYRMGLSDKDIVALSGG 159

Query: 270 HTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGK 329
           HT+G AH  E S        + P   E                              P K
Sbjct: 160 HTLGRAH-PERS------GFDGPWTKE------------------------------PLK 182

Query: 330 FDNSYF----RGLPRGLGLLRVDNMLVKDPRTKPLVDQYASNE 368
           FDNSYF    +G   GL  L  D  L++DP  +P V+ YA +E
Sbjct: 183 FDNSYFVELLKGESEGLLKLPTDKALLEDPEFRPYVELYAKDE 225

Length = 289

>gnl|CDD|237865 PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional

 Score = 52.8 bits (127), Expect = 1e-07
 Identities = 21/83 (25%), Positives = 37/83 (44%)

Query: 23  PNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSP 82
           P +   +  P+   +P     A+P  +PVA    +P  +  P+  AS   +P A+  P+P
Sbjct: 366 PAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAP 425

Query: 83  AASPNPRPLASPMPSAKPALRAD 105
            A+P     A+   +A  A+   
Sbjct: 426 VAAPAAAAPAAAPAAAPAAVALA 448

Length = 618

>gnl|CDD|237030 PRK12270, kgd, alpha-ketoglutarate decarboxylase; Reviewed

 Score = 52.6 bits (127), Expect = 2e-07
 Identities = 20/76 (26%), Positives = 33/76 (43%)

Query: 26  PNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSPAAS 85
             A+P  +  A+   +   +  P+  A   P+P      +P A PKP+  A+   +PAA 
Sbjct: 40  STAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAP 99

Query: 86  PNPRPLASPMPSAKPA 101
           P     A+P  +A   
Sbjct: 100 PAAAAAAAPAAAAVED 115

Length = 1228

>gnl|CDD|178467 PLN02879, PLN02879, L-ascorbate peroxidase

 Score = 50.8 bits (121), Expect = 3e-07
 Identities = 51/197 (25%), Positives = 80/197 (40%), Gaps = 45/197 (22%)

Query: 176 DAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARI 235
           +  D+ +++ + +++  P ++S AD    +    V + GGP      GR D +       
Sbjct: 73  NGLDIAVRLLDPIKELFP-ILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPPPE-- 129

Query: 236 PGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDP 295
            G LP     +D +  +F   G + ++ VAL G HT+G  H KE S   F+ A       
Sbjct: 130 -GRLPQATKGVDHLRDVFGRMGLNDKDIVALSGGHTLGRCH-KERSG--FEGAWTP---- 181

Query: 296 ELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFR----GLPRGLGLLRVDNML 351
                                         +P  FDNSYF+    G   GL  L  D  L
Sbjct: 182 ------------------------------NPLIFDNSYFKEILSGEKEGLLQLPTDKAL 211

Query: 352 VKDPRTKPLVDQYASNE 368
           + DP   P V++YA++E
Sbjct: 212 LDDPLFLPFVEKYAADE 228

Length = 251

>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional

 Score = 51.9 bits (124), Expect = 4e-07
 Identities = 23/85 (27%), Positives = 34/85 (40%)

Query: 17   PYSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLA 76
            P S +    P A  +P      +P+   S +   +   +P     P+  P   P+P P  
Sbjct: 2866 PPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPP 2925

Query: 77   SPKPSPAASPNPRPLASPMPSAKPA 101
             P+P P   P PRP     P+  PA
Sbjct: 2926 PPQPQPPPPPPPRPQPPLAPTTDPA 2950

Length = 3151

>gnl|CDD|236940 PRK11633, PRK11633, cell division protein DedD; Provisional

 Score = 50.0 bits (120), Expect = 5e-07
 Identities = 19/68 (27%), Positives = 24/68 (35%)

Query: 23  PNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSP 82
            ++   S  P+ VA P       P P     PKP     PKP P    +  P   P+P P
Sbjct: 78  GDAAAPSLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQKVEAPPAPKPEPKP 137

Query: 83  AASPNPRP 90
                  P
Sbjct: 138 VVEEKAAP 145

Length = 226

>gnl|CDD|173826 cd00692, ligninase, Ligninase and other manganese-dependent fungal peroxidases

 Score = 50.1 bits (120), Expect = 7e-07
 Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 3/60 (5%)

Query: 214 GGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIG 273
           G PR     GRKD   +Q A   G +P    ++D+IL  FA  GFS  E VAL+ AH++ 
Sbjct: 121 GAPRLEFYAGRKDA--TQPA-PDGLVPEPFDSVDKILARFADAGFSPDELVALLAAHSVA 177

Ligninases and related extracellular fungal peroxidases belong to class II of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class II peroxidases are fungal glycoproteins that have been implicated in the oxidative breakdown of lignin, the main cell wall component of woody plants. They contain four conserved disulphide bridges and two conserved calcium binding sites. Length = 328

>gnl|CDD|237865 PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional

 Score = 50.5 bits (121), Expect = 8e-07
 Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 1/96 (1%)

Query: 11  LAFISIPYSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASP 70
           LAF     + A   +   +P     A+P  +P A    +P  +  P+  AS   +P A+ 
Sbjct: 362 LAFKPAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAA 421

Query: 71  KPSPLASPKP-SPAASPNPRPLASPMPSAKPALRAD 105
            P+P+A+P   +PAA+P   P A  +  A PA  A 
Sbjct: 422 PPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQAAP 457

Length = 618

>gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated

 Score = 50.8 bits (122), Expect = 8e-07
 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 1/76 (1%)

Query: 26  PNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSPAAS 85
           P A+  P+P A+P+P+P  +P P+P +    +P A   PSP  +  PS   +P P+ A  
Sbjct: 417 PAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAP-AGGAPSPPPAAAPSAQPAPAPAAAPE 475

Query: 86  PNPRPLASPMPSAKPA 101
           P   P  +P  +  PA
Sbjct: 476 PTAAPAPAPPAAPAPA 491

Length = 824

>gnl|CDD|237030 PRK12270, kgd, alpha-ketoglutarate decarboxylase; Reviewed

 Score = 50.3 bits (121), Expect = 1e-06
 Identities = 18/68 (26%), Positives = 31/68 (45%)

Query: 21  ANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKP 80
           A   +  A+   +   +  P+ +A   P+P      +P A PKP+  A+   +P A P  
Sbjct: 43  APTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAA 102

Query: 81  SPAASPNP 88
           + AA+P  
Sbjct: 103 AAAAAPAA 110

Length = 1228

>gnl|CDD|237030 PRK12270, kgd, alpha-ketoglutarate decarboxylase; Reviewed

 Score = 49.9 bits (120), Expect = 2e-06
 Identities = 21/74 (28%), Positives = 32/74 (43%)

Query: 28  ASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSPAASPN 87
           A   P   A+P  +  A+   +   +  P+  A   P+P      +P A PKP+ AA+  
Sbjct: 34  ADYGPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAA 93

Query: 88  PRPLASPMPSAKPA 101
             P A P  +A  A
Sbjct: 94  AAPAAPPAAAAAAA 107

Length = 1228

>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional

 Score = 49.9 bits (119), Expect = 2e-06
 Identities = 24/86 (27%), Positives = 28/86 (32%)

Query: 15   SIPYSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSP 74
            S     A P  P       P  S      A P   P   P+P     P+P P   P P P
Sbjct: 2870 SPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQP 2929

Query: 75   LASPKPSPAASPNPRPLASPMPSAKP 100
               P P P   P   P   P  + +P
Sbjct: 2930 QPPPPPPPRPQPPLAPTTDPAGAGEP 2955

Length = 3151

>gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated

 Score = 48.8 bits (117), Expect = 3e-06
 Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 9/88 (10%)

Query: 23  PNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSP---------LASPKPSPVASPKPS 73
                A+  P+  A+P P+    P P+P  +P P             SP P+   S +P+
Sbjct: 408 AAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPA 467

Query: 74  PLASPKPSPAASPNPRPLASPMPSAKPA 101
           P  +  P P A+P P P A+P P+A PA
Sbjct: 468 PAPAAAPEPTAAPAPAPPAAPAPAAAPA 495

Length = 824

>gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated

 Score = 48.8 bits (117), Expect = 3e-06
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 1/82 (1%)

Query: 21  ANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPK-PSPVASPKPSPLASPK 79
           A P    A+P  +   +P  +P+ +P P+P  +P      +P   +P   P  +P A P 
Sbjct: 408 AAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPA 467

Query: 80  PSPAASPNPRPLASPMPSAKPA 101
           P+PAA+P P    +P P A PA
Sbjct: 468 PAPAAAPEPTAAPAPAPPAAPA 489

Length = 824

>gnl|CDD|236940 PRK11633, PRK11633, cell division protein DedD; Provisional

 Score = 46.9 bits (112), Expect = 4e-06
 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 2/58 (3%)

Query: 19  SIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPS--PVASPKPSP 74
           +   P +    P+P+PV  PKP P   PKP P    K     +PKP   PV   K +P
Sbjct: 88  ATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQKVEAPPAPKPEPKPVVEEKAAP 145

Length = 226

>gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated

 Score = 48.4 bits (116), Expect = 4e-06
 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 3/86 (3%)

Query: 21  ANPNSPNASPKPSPVASPKPSPR---ASPKPSPVASPKPSPLASPKPSPVASPKPSPLAS 77
           A   +P  +P P+P +    +P     SP P+   S +P+P  +  P P A+P P+P A+
Sbjct: 428 APQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAA 487

Query: 78  PKPSPAASPNPRPLASPMPSAKPALR 103
           P P+ A +    P A         LR
Sbjct: 488 PAPAAAPAAPAAPAAPAGADDAATLR 513

Length = 824

>gnl|CDD|236940 PRK11633, PRK11633, cell division protein DedD; Provisional

 Score = 46.9 bits (112), Expect = 5e-06
 Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 2/65 (3%)

Query: 21  ANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPS--PLASP 78
           A    P     P+    P+P+P   PKP PV  PKP P    K     +PKP   P+   
Sbjct: 82  APSLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQKVEAPPAPKPEPKPVVEE 141

Query: 79  KPSPA 83
           K +P 
Sbjct: 142 KAAPT 146

Length = 226

>gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated

 Score = 48.1 bits (115), Expect = 5e-06
 Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 1/78 (1%)

Query: 25  SPNASPKPSPVASPKPSPRASPKPSPV-ASPKPSPLASPKPSPVASPKPSPLASPKPSPA 83
           +P A+P+P+P  +P P+P +    +P   +P P P A+P   P  +P  +P  +  P+PA
Sbjct: 424 APAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPA 483

Query: 84  ASPNPRPLASPMPSAKPA 101
               P P A+P   A PA
Sbjct: 484 PPAAPAPAAAPAAPAAPA 501

Length = 824

>gnl|CDD|237030 PRK12270, kgd, alpha-ketoglutarate decarboxylase; Reviewed

 Score = 48.0 bits (115), Expect = 6e-06
 Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 2/83 (2%)

Query: 21  ANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKP 80
               +  A+   +  ++P  +P A    +P  +P  +   +  P P A+   +   +  P
Sbjct: 41  TAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPP 100

Query: 81  SPAASPNPRPLASPMPSAKPALR 103
           + AA+  P   A+      P LR
Sbjct: 101 AAAAAAAPAA-AAVEDEVTP-LR 121

Length = 1228

>gnl|CDD|237030 PRK12270, kgd, alpha-ketoglutarate decarboxylase; Reviewed

 Score = 48.0 bits (115), Expect = 6e-06
 Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 9/90 (10%)

Query: 21  ANPNSPNAS---------PKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPK 71
           A+PNS + S         P  +   +   +  A+   +P A+P     A+P P+P A+  
Sbjct: 20  ADPNSVDPSWREFFADYGPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAA 79

Query: 72  PSPLASPKPSPAASPNPRPLASPMPSAKPA 101
           P+    P  + AA+  P    +   +A PA
Sbjct: 80  PAAPPKPAAAAAAAAAPAAPPAAAAAAAPA 109

Length = 1228

>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional

 Score = 48.0 bits (114), Expect = 6e-06
 Identities = 20/69 (28%), Positives = 23/69 (33%)

Query: 26   PNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSPAAS 85
            P  S      A P   P   P+P     P+P P   P P P   P P P   P  +P   
Sbjct: 2889 PAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTD 2948

Query: 86   PNPRPLASP 94
            P      S 
Sbjct: 2949 PAGAGEPSG 2957

Length = 3151

>gnl|CDD|236138 PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated

 Score = 47.6 bits (114), Expect = 6e-06
 Identities = 22/116 (18%), Positives = 36/116 (31%), Gaps = 27/116 (23%)

Query: 19  SIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASP-------- 70
            +  P  P  S  P+  A    +P A+  P    +  P P ++P+ +P            
Sbjct: 364 PLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLL 423

Query: 71  --------KPSPLASPKPSPAASPNPRPLAS-----------PMPSAKPALRADYY 107
                         + K  PAA+   RP+ S           P    K   + + Y
Sbjct: 424 AARQQLQRAQGATKAKKSEPAAASRARPVNSALERLASVRPAPSALEKAPAKKEAY 479

Length = 647

>gnl|CDD|237030 PRK12270, kgd, alpha-ketoglutarate decarboxylase; Reviewed

 Score = 47.6 bits (114), Expect = 8e-06
 Identities = 16/65 (24%), Positives = 28/65 (43%)

Query: 19  SIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASP 78
           + A   +   +  P+  A   P+P      +P A PKP+  A+   +P A P  +  A+P
Sbjct: 49  AAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAP 108

Query: 79  KPSPA 83
             +  
Sbjct: 109 AAAAV 113

Length = 1228

>gnl|CDD|237865 PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional

 Score = 46.6 bits (111), Expect = 1e-05
 Identities = 27/117 (23%), Positives = 42/117 (35%), Gaps = 3/117 (2%)

Query: 26  PNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSPAAS 85
             A+P  +PVA    +P  +  P+  AS   +P A+  P+PVA+P     A+P  +PAA+
Sbjct: 385 EAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAP---AAAAPAAAPAAA 441

Query: 86  PNPRPLASPMPSAKPALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMH 142
           P    LA   P+              P+               +            H
Sbjct: 442 PAAVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEEGDVWH 498

Length = 618

>gnl|CDD|236940 PRK11633, PRK11633, cell division protein DedD; Provisional

 Score = 45.8 bits (109), Expect = 1e-05
 Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 2/69 (2%)

Query: 33  SPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSPAASPNPRPLA 92
              A+P   P     P+    P+P+P+  PKP PV  PKP P   P+    A P P+P  
Sbjct: 78  GDAAAPSLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKP--KPQQKVEAPPAPKPEP 135

Query: 93  SPMPSAKPA 101
            P+   K A
Sbjct: 136 KPVVEEKAA 144

Length = 226

>gnl|CDD|237030 PRK12270, kgd, alpha-ketoglutarate decarboxylase; Reviewed

 Score = 46.4 bits (111), Expect = 2e-05
 Identities = 16/69 (23%), Positives = 26/69 (37%)

Query: 36  ASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSPAASPNPRPLASPM 95
           A   P   A+P  +  A+   +   +  P+  A   P+P      +PAA P P   A+  
Sbjct: 34  ADYGPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAA 93

Query: 96  PSAKPALRA 104
            +      A
Sbjct: 94  AAPAAPPAA 102

Length = 1228

>gnl|CDD|237057 PRK12323, PRK12323, DNA polymerase III subunits gamma and tau; Provisional

 Score = 46.4 bits (110), Expect = 2e-05
 Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 3/93 (3%)

Query: 21  ANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKP 80
           A+   P  +P P+P  +  P+  A P     A P+P   A+      A+P  +P  +   
Sbjct: 439 ASARGPGGAPAPAPAPAAAPAAAARP---AAAGPRPVAAAAAAAPARAAPAAAPAPADDD 495

Query: 81  SPAASPNPRPLASPMPSAKPALRADYYKTTCPD 113
            P     P   ASP P+   A  A +   + PD
Sbjct: 496 PPPWEELPPEFASPAPAQPDAAPAGWVAESIPD 528

Length = 700

>gnl|CDD|237057 PRK12323, PRK12323, DNA polymerase III subunits gamma and tau; Provisional

 Score = 46.0 bits (109), Expect = 2e-05
 Identities = 23/114 (20%), Positives = 38/114 (33%), Gaps = 4/114 (3%)

Query: 26  PNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSPAAS 85
             A    +      P+P  +P  +P A+ +P   A P+P   A+      A+P  +PA +
Sbjct: 434 AAARQASARGPGGAPAPAPAPAAAPAAAARP-AAAGPRPVAAAAAAAPARAAPAAAPAPA 492

Query: 86  PNPRPLASPMPSAKPALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRV 139
            +  P    +P    +                V E +    T  P  A   L  
Sbjct: 493 DDDPPPWEELPPEFASPAPA---QPDAAPAGWVAESIPDPATADPDDAFETLAP 543

Length = 700

>gnl|CDD|219321 pfam07174, FAP, Fibronectin-attachment protein (FAP)

 Score = 45.3 bits (107), Expect = 2e-05
 Identities = 29/87 (33%), Positives = 36/87 (41%), Gaps = 4/87 (4%)

Query: 19  SIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASP 78
           +IA P + NA P P P     P   A+  P+P A P P P A+P       P  +P   P
Sbjct: 30  AIALPATANADPAPPPP----PPSTAAAAPAPAAPPPPPPPAAPPAPQPDDPNAAPPPPP 85

Query: 79  KPSPAASPNPRPLASPMPSAKPALRAD 105
               A  P P    +P P A    R D
Sbjct: 86  ADPNAPPPPPVDPNAPPPPAPEPGRID 112

This family contains bacterial fibronectin-attachment proteins (FAP). Family members are rich in alanine and proline, are approximately 300 long, and seem to be restricted to mycobacteria. These proteins contain a fibronectin-binding motif that allows mycobacteria to bind to fibronectin in the extracellular matrix. Length = 297

>gnl|CDD|237864 PRK14950, PRK14950, DNA polymerase III subunits gamma and tau; Provisional

 Score = 46.0 bits (109), Expect = 2e-05
 Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 2/80 (2%)

Query: 26  PNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSPAAS 85
           P  +P+P+   +  PSP   P P+P   PK +  A+  P      + +      P P A 
Sbjct: 362 PVPAPQPAKPTAAAPSP-VRPTPAPSTRPKAAAAANIPPKEPV-RETATPPPVPPRPVAP 419

Query: 86  PNPRPLASPMPSAKPALRAD 105
           P P    S     + A+  D
Sbjct: 420 PVPHTPESAPKLTRAAIPVD 439

Length = 585

>gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated

 Score = 45.7 bits (109), Expect = 3e-05
 Identities = 23/78 (29%), Positives = 35/78 (44%)

Query: 17  PYSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLA 76
           P     P SP  +       SP P+   S +P+P  +  P P A+P P+P A+P P+   
Sbjct: 435 PAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAP 494

Query: 77  SPKPSPAASPNPRPLASP 94
           +   +PAA       A+ 
Sbjct: 495 AAPAAPAAPAGADDAATL 512

Length = 824

>gnl|CDD|237057 PRK12323, PRK12323, DNA polymerase III subunits gamma and tau; Provisional

 Score = 45.6 bits (108), Expect = 3e-05
 Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 3/88 (3%)

Query: 17  PYSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLA 76
           P   A P +P A+P  +  A    +  A   P+P A       ++  P    +P P+P A
Sbjct: 397 PAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAA 456

Query: 77  SPKPS---PAASPNPRPLASPMPSAKPA 101
           +P  +    AA P P   A+    A+ A
Sbjct: 457 APAAAARPAAAGPRPVAAAAAAAPARAA 484

Length = 700

>gnl|CDD|165527 PHA03269, PHA03269, envelope glycoprotein C; Provisional

 Score = 45.5 bits (107), Expect = 3e-05
 Identities = 35/129 (27%), Positives = 49/129 (37%), Gaps = 16/129 (12%)

Query: 14  ISIP--YSIANPNSPNASPKPSPVASPKPSP------RASPKPSPVASPKPSPLASPKPS 65
           I IP  ++ A    P+ +P P   AS  P P       AS KP    +P P+  AS K  
Sbjct: 26  IPIPELHTSAATQKPDPAPAPHQAASRAPDPAVAPTSAASRKPDLAQAPTPA--ASEKFD 83

Query: 66  PVASPKPSPLASPKPSPAASPN----PRPLASPMPSAKPALRADYYKTTCPDFEKIVREF 121
           P  +P P   AS  P PA +P     P+P A+   ++                 K     
Sbjct: 84  P--APAPHQAASRAPDPAVAPQLAAAPKPDAAEAFTSAAQAHEAPADAGTSAASKKPDPA 141

Query: 122 VHQKQTQSP 130
            H + +  P
Sbjct: 142 AHTQHSPPP 150

Length = 566

>gnl|CDD|200219 TIGR02927, SucB_Actino, 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase

 Score = 45.4 bits (107), Expect = 3e-05
 Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 1/70 (1%)

Query: 27  NASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPK-PSPAAS 85
           +A+  P+  A  +    +     P   P      +    P  +P P+  A+P   +P +S
Sbjct: 202 DANAAPAEPAEEEAPAPSEAGSEPAPDPAARAPHAAPDPPAPAPAPAKTAAPAAAAPVSS 261

Query: 86  PNPRPLASPM 95
            +  P  +P+
Sbjct: 262 GDSGPYVTPL 271

This model represents an Actinobacterial clade of E2 enzyme, a component of the 2-oxoglutarate dehydrogenase complex involved in the TCA cycle. These proteins have multiple domains including the catalytic domain (pfam00198), one or two biotin domains (pfam00364) and an E3-component binding domain (pfam02817). Length = 579

>gnl|CDD|235906 PRK07003, PRK07003, DNA polymerase III subunits gamma and tau; Validated

 Score = 45.6 bits (108), Expect = 3e-05
 Identities = 18/78 (23%), Positives = 27/78 (34%)

Query: 28  ASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSPAASPN 87
           A+   +P A+P P   A           P P  +   +   S      A P     ++  
Sbjct: 420 ATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASA 479

Query: 88  PRPLASPMPSAKPALRAD 105
           P   A P  + +PA RA 
Sbjct: 480 PASDAPPDAAFEPAPRAA 497

Length = 830

>gnl|CDD|237874 PRK14971, PRK14971, DNA polymerase III subunits gamma and tau; Provisional

 Score = 45.2 bits (107), Expect = 4e-05
 Identities = 21/87 (24%), Positives = 29/87 (33%), Gaps = 5/87 (5%)

Query: 23  PNSPNASPKPS---PVASPKPS--PRASPKPSPVASPKPSPLASPKPSPVASPKPSPLAS 77
              P    KP    P A+P+PS    ASP PS  ++            P  +P    +  
Sbjct: 372 GRGPKQHIKPVFTQPAAAPQPSAAAAASPSPSQSSAAAQPSAPQSATQPAGTPPTVSVDP 431

Query: 78  PKPSPAASPNPRPLASPMPSAKPALRA 104
           P   P   P+  P A      K   + 
Sbjct: 432 PAAVPVNPPSTAPQAVRPAQFKEEKKI 458

Length = 614

>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional

 Score = 45.3 bits (107), Expect = 5e-05
 Identities = 19/70 (27%), Positives = 27/70 (38%)

Query: 23   PNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSP 82
              S +      P   P+  P+    P P   P+P P   P+P P   P+P P  +P   P
Sbjct: 2890 AVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDP 2949

Query: 83   AASPNPRPLA 92
            A +  P    
Sbjct: 2950 AGAGEPSGAV 2959

Length = 3151

>gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated

 Score = 44.6 bits (106), Expect = 6e-05
 Identities = 21/73 (28%), Positives = 33/73 (45%)

Query: 17  PYSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLA 76
             +   P     SP P+   S +P+P  +  P P A+P P+P A+P P+   +   +P A
Sbjct: 443 SPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAA 502

Query: 77  SPKPSPAASPNPR 89
                 AA+   R
Sbjct: 503 PAGADDAATLRER 515

Length = 824

>gnl|CDD|237057 PRK12323, PRK12323, DNA polymerase III subunits gamma and tau; Provisional

 Score = 44.9 bits (106), Expect = 6e-05
 Identities = 22/87 (25%), Positives = 38/87 (43%)

Query: 15  SIPYSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSP 74
           + P +   P +   +      A+P  +P A+P  +  A    +  A   P+P A      
Sbjct: 379 AAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQ 438

Query: 75  LASPKPSPAASPNPRPLASPMPSAKPA 101
            ++  P  A +P P P A+P  +A+PA
Sbjct: 439 ASARGPGGAPAPAPAPAAAPAAAARPA 465

Length = 700

>gnl|CDD|166005 PLN02364, PLN02364, L-ascorbate peroxidase 1

 Score = 43.5 bits (102), Expect = 6e-05
 Identities = 53/194 (27%), Positives = 82/194 (42%), Gaps = 46/194 (23%)

Query: 180 VVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIPGNL 239
           + +++ + + +  P  +S AD    +    V + GGP      GR+D          G L
Sbjct: 76  IALRLLDPIREQFP-TISFADFHQLAGVVAVEVTGGPDIPFHPGRED---KPQPPPEGRL 131

Query: 240 PTNNMTMDEILKMFASK-GFSIQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELN 298
           P      D +  +FA + G S ++ VAL GAHT+G  H     DR               
Sbjct: 132 PDATKGCDHLRDVFAKQMGLSDKDIVALSGAHTLGRCH----KDR--------------- 172

Query: 299 PKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLPRGL--GLLRV--DNMLVKD 354
                  + A  +              +P  FDNSYF+ L  G   GLL++  D  L+ D
Sbjct: 173 ----SGFEGAWTS--------------NPLIFDNSYFKELLSGEKEGLLQLVSDKALLDD 214

Query: 355 PRTKPLVDQYASNE 368
           P  +PLV++YA++E
Sbjct: 215 PVFRPLVEKYAADE 228

Length = 250

>gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated

 Score = 44.6 bits (106), Expect = 7e-05
 Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 3/80 (3%)

Query: 25  SPNASPKPSPVASPKPSPRASPKP---SPVASPKPSPLASPKPSPVASPKPSPLASPKPS 81
           +    P P+P  +P P   A   P   +P   P  +P A P P+P A+P+P+   +P P 
Sbjct: 426 AAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPP 485

Query: 82  PAASPNPRPLASPMPSAKPA 101
            A +P   P A   P+A   
Sbjct: 486 AAPAPAAAPAAPAAPAAPAG 505

Length = 824

>gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated

 Score = 44.6 bits (106), Expect = 7e-05
 Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 6/84 (7%)

Query: 23  PNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPK-----PSPLAS 77
           P++  A+P  +P A    +P A+  P+P A+P+P+P  +P P+P +         +P   
Sbjct: 399 PSAAAAAPAAAP-APAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPP 457

Query: 78  PKPSPAASPNPRPLASPMPSAKPA 101
           P  +P+A P P P A+P P+A PA
Sbjct: 458 PAAAPSAQPAPAPAAAPEPTAAPA 481

Length = 824

>gnl|CDD|237864 PRK14950, PRK14950, DNA polymerase III subunits gamma and tau; Provisional

 Score = 44.4 bits (105), Expect = 7e-05
 Identities = 23/121 (19%), Positives = 35/121 (28%), Gaps = 4/121 (3%)

Query: 17  PYSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLA 76
           P            P P+P   PK +  A+  P      + +      P PVA P P    
Sbjct: 368 PAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPV-RETATPPPVPPRPVAPPVPHTPE 426

Query: 77  SPKPSPAAS---PNPRPLASPMPSAKPALRADYYKTTCPDFEKIVREFVHQKQTQSPSTA 133
           S      A+           P P  +               E I ++ +     +SP+  
Sbjct: 427 SAPKLTRAAIPVDEKPKYTPPAPPKEEEKALIADGDVLEQLEAIWKQILRDVPPRSPAVQ 486

Query: 134 A 134
           A
Sbjct: 487 A 487

Length = 585

>gnl|CDD|237057 PRK12323, PRK12323, DNA polymerase III subunits gamma and tau; Provisional

 Score = 44.1 bits (104), Expect = 8e-05
 Identities = 29/130 (22%), Positives = 51/130 (39%), Gaps = 11/130 (8%)

Query: 2   AVLPISVIFLAFISIPYSIANPNSPNASPKPSPVASPKPSP------RASPKPSPVASPK 55
           A  P++    A  +   +   P +P A+P  +P A+           R SP P  +A+ +
Sbjct: 378 AAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAAR 437

Query: 56  PS----PLASPKPSPVASPKPSPLASPKPSPAASPNPRPLASPMPSAKPALRADYYKTTC 111
            +    P  +P P+P  +  P+  A+   +    P     A+    A PA          
Sbjct: 438 QASARGPGGAPAPAPAPAAAPAA-AARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDP 496

Query: 112 PDFEKIVREF 121
           P +E++  EF
Sbjct: 497 PPWEELPPEF 506

Length = 700

>gnl|CDD|200219 TIGR02927, SucB_Actino, 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase

 Score = 44.2 bits (104), Expect = 8e-05
 Identities = 15/69 (21%), Positives = 26/69 (37%), Gaps = 1/69 (1%)

Query: 25  SPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPK-PSPLASPKPSPA 83
           +  A  +    +     P   P      +    P  +P P+  A+P   +P++S    P 
Sbjct: 208 AEPAEEEAPAPSEAGSEPAPDPAARAPHAAPDPPAPAPAPAKTAAPAAAAPVSSGDSGPY 267

Query: 84  ASPNPRPLA 92
            +P  R LA
Sbjct: 268 VTPLVRKLA 276

This model represents an Actinobacterial clade of E2 enzyme, a component of the 2-oxoglutarate dehydrogenase complex involved in the TCA cycle. These proteins have multiple domains including the catalytic domain (pfam00198), one or two biotin domains (pfam00364) and an E3-component binding domain (pfam02817). Length = 579

>gnl|CDD|237874 PRK14971, PRK14971, DNA polymerase III subunits gamma and tau; Provisional

 Score = 44.4 bits (105), Expect = 8e-05
 Identities = 22/88 (25%), Positives = 30/88 (34%), Gaps = 4/88 (4%)

Query: 17  PYSIANP--NSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSP 74
           P     P    P A+P+PS  A+  PSP  S   +      P     P  +P       P
Sbjct: 375 PKQHIKPVFTQPAAAPQPSAAAAASPSPSQSSAAAQ--PSAPQSATQPAGTPPTVSVDPP 432

Query: 75  LASPKPSPAASPNPRPLASPMPSAKPAL 102
            A P   P+ +P     A      K  +
Sbjct: 433 AAVPVNPPSTAPQAVRPAQFKEEKKIPV 460

Length = 614

>gnl|CDD|236940 PRK11633, PRK11633, cell division protein DedD; Provisional

 Score = 43.1 bits (102), Expect = 9e-05
 Identities = 21/74 (28%), Positives = 29/74 (39%)

Query: 28  ASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSPAASPN 87
             P      + +    A+P   P     P+    P+P+PV  PKP P+  PKP P     
Sbjct: 65  TQPPEGAAEAVRAGDAAAPSLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQK 124

Query: 88  PRPLASPMPSAKPA 101
                +P P  KP 
Sbjct: 125 VEAPPAPKPEPKPV 138

Length = 226

>gnl|CDD|237030 PRK12270, kgd, alpha-ketoglutarate decarboxylase; Reviewed

 Score = 43.7 bits (104), Expect = 1e-04
 Identities = 13/67 (19%), Positives = 27/67 (40%)

Query: 19  SIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASP 78
           + A  ++P A+P     A+P P+P A+  P+    P  +  A+  P+   +   +   + 
Sbjct: 51  AAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAA 110

Query: 79  KPSPAAS 85
                  
Sbjct: 111 AAVEDEV 117

Length = 1228

>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional

 Score = 44.2 bits (104), Expect = 1e-04
 Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 2/78 (2%)

Query: 26   PNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSPAAS 85
            P   P+  P     P P+  P+P P   P+P P   P+P P  +P   P  + +PS A  
Sbjct: 2901 PPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAV- 2959

Query: 86   PNPRPLASPMPSAKPALR 103
            P P  L + +P      R
Sbjct: 2960 PQPW-LGALVPGRVAVPR 2976

Length = 3151

>gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated

 Score = 43.4 bits (103), Expect = 1e-04
 Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)

Query: 21  ANPNSPNASPKPSPVASPKPSPRASPKPS---PVASPKPSPLASPKPSPVASPKPSPLAS 77
                   +P  +  ++   +P A+P P+   P A+  P+P A+P+P+P  +P P+P  S
Sbjct: 385 LGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAP-PS 443

Query: 78  PKPSPAASPNPRPLASPMPSAKPA 101
           P  +  A   P P  +  PSA+PA
Sbjct: 444 PAGNAPAGGAPSPPPAAAPSAQPA 467

Length = 824

>gnl|CDD|237874 PRK14971, PRK14971, DNA polymerase III subunits gamma and tau; Provisional

 Score = 43.2 bits (102), Expect = 1e-04
 Identities = 15/70 (21%), Positives = 24/70 (34%), Gaps = 1/70 (1%)

Query: 23  PNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSP 82
             +  ASP PS  ++            P  +P    +  P   PV  P  +P A   P+ 
Sbjct: 393 SAAAAASPSPSQSSAAAQPSAPQSATQPAGTPPTVSVDPPAAVPVNPPSTAPQAVR-PAQ 451

Query: 83  AASPNPRPLA 92
                  P++
Sbjct: 452 FKEEKKIPVS 461

Length = 614

>gnl|CDD|237862 PRK14948, PRK14948, DNA polymerase III subunits gamma and tau; Provisional

 Score = 43.8 bits (104), Expect = 1e-04
 Identities = 17/70 (24%), Positives = 26/70 (37%)

Query: 19  SIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASP 78
            IAN ++P         + P    + S   +  A+  PSP  +    P+  P      SP
Sbjct: 367 EIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATTPSPPPAKASPPIPVPAEPTEPSP 426

Query: 79  KPSPAASPNP 88
            P   A+  P
Sbjct: 427 TPPANAANAP 436

Length = 620

>gnl|CDD|223039 PHA03307, PHA03307, transcriptional regulator ICP4; Provisional

 Score = 44.0 bits (104), Expect = 1e-04
 Identities = 30/90 (33%), Positives = 38/90 (42%), Gaps = 3/90 (3%)

Query: 17  PYSIANPNSPNASPKPSPVASPKPSPRASPKPSPV--ASPKPSPLASPKPSPVASPKPSP 74
           P S A   SP      SP   P   P ASP PSP    S    P+ SP P P ASP  + 
Sbjct: 97  PASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAG 156

Query: 75  LASPKPSPAASPNPRPLASPMPSAKPALRA 104
            +      + + + R  A P+ S +   RA
Sbjct: 157 ASPA-AVASDAASSRQAALPLSSPEETARA 185

Length = 1352

>gnl|CDD|240289 PTZ00144, PTZ00144, dihydrolipoamide succinyltransferase; Provisional

 Score = 43.5 bits (103), Expect = 1e-04
 Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 5/73 (6%)

Query: 28  ASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSPAASPN 87
               P   A    +   + K +P      +P     P P A+ KP+P A+ KP P  +P 
Sbjct: 120 TGGAPPAAAPAAAAAAKAEKTTPEKPKAAAP----TPEPPAASKPTPPAAAKP-PEPAPA 174

Query: 88  PRPLASPMPSAKP 100
            +P  +P+  A P
Sbjct: 175 AKPPPTPVARADP 187

Length = 418

>gnl|CDD|236768 PRK10819, PRK10819, transport protein TonB; Provisional

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 26/92 (28%), Positives = 34/92 (36%), Gaps = 11/92 (11%)

Query: 17  PYSIANPNSPNASPKPSPVASPKPSPRASPKP---------SPVASPKPSPLASPKPSPV 67
           P  I  P        P P   PKP P+  PKP           V   +P P +  + +  
Sbjct: 78  PEPIPEPPKEAPVVIPKPEPKPKPKPKPKPKPVKKVEEQPKREVKPVEPRPASPFENTAP 137

Query: 68  ASPKPSPL--ASPKPSPAASPNPRPLASPMPS 97
           A P  S    A+ KP  + S  PR L+   P 
Sbjct: 138 ARPTSSTATAAASKPVTSVSSGPRALSRNQPQ 169

Length = 246

>gnl|CDD|236138 PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated

 Score = 42.9 bits (102), Expect = 2e-04
 Identities = 18/88 (20%), Positives = 27/88 (30%), Gaps = 6/88 (6%)

Query: 21  ANPNSPNASPKPSPVASPKPSPRASPKPSPVASP----KPSPLASPKPSPVASPKPSPLA 76
               +    P  +P  +P      +      A            + K  P A+ +  P+ 
Sbjct: 394 PQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKSEPAAASRARPVN 453

Query: 77  SPKPSPAASPNPRPLASP-MPSAKPALR 103
           S      AS  P P A    P+ K A R
Sbjct: 454 SA-LERLASVRPAPSALEKAPAKKEAYR 480

Length = 647

>gnl|CDD|237862 PRK14948, PRK14948, DNA polymerase III subunits gamma and tau; Provisional

 Score = 43.0 bits (102), Expect = 2e-04
 Identities = 21/84 (25%), Positives = 29/84 (34%), Gaps = 2/84 (2%)

Query: 19  SIANPNSPNASPKPSPVASPKPSP-RASPKPSPVA-SPKPSPLASPKPSPVASPKPSPLA 76
              + ++ N +  P P     P P    P P P A +P P+P   P  +  AS       
Sbjct: 511 ESQSGSASNTAKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQI 570

Query: 77  SPKPSPAASPNPRPLASPMPSAKP 100
               SP       P  SP   + P
Sbjct: 571 PADSSPPPPIPEEPTPSPTKDSSP 594

Length = 620

>gnl|CDD|237862 PRK14948, PRK14948, DNA polymerase III subunits gamma and tau; Provisional

 Score = 43.0 bits (102), Expect = 2e-04
 Identities = 19/79 (24%), Positives = 27/79 (34%), Gaps = 3/79 (3%)

Query: 24  NSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPK---PSPVASPKPSPLASPKP 80
            S   S   +  A   P+P  +P P P      +P        PSP  +    P+  P  
Sbjct: 361 PSAFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATTPSPPPAKASPPIPVPAE 420

Query: 81  SPAASPNPRPLASPMPSAK 99
               SP P   A+  P + 
Sbjct: 421 PTEPSPTPPANAANAPPSL 439

Length = 620

>gnl|CDD|114603 pfam05887, Trypan_PARP, Procyclic acidic repetitive protein (PARP)

 Score = 41.1 bits (95), Expect = 2e-04
 Identities = 17/67 (25%), Positives = 26/67 (38%)

Query: 22  NPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPS 81
           N   P+  P+      P+      P+P      +P P  + +  P   P+P P   P+P 
Sbjct: 56  NGTDPDDEPEEEEEPEPEEEGEEEPEPEEEGEEEPEPEETGEEEPEPEPEPEPEPEPEPE 115

Query: 82  PAASPNP 88
           P   P P
Sbjct: 116 PEPEPEP 122

This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated. Length = 145

>gnl|CDD|236776 PRK10856, PRK10856, cytoskeletal protein RodZ; Provisional

 Score = 42.7 bits (101), Expect = 2e-04
 Identities = 17/84 (20%), Positives = 35/84 (41%), Gaps = 4/84 (4%)

Query: 15  SIPYSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSP 74
           S+P   +    P  +P P+      P+       +P  +  P+P   P+ + V +P  + 
Sbjct: 161 SVPLDTSTTTDPATTPAPAAPVDTTPTN----SQTPAVATAPAPAVDPQQNAVVAPSQAN 216

Query: 75  LASPKPSPAASPNPRPLASPMPSA 98
           + +      A+P     A+P+P+ 
Sbjct: 217 VDTAATPAPAAPATPDGAAPLPTD 240

Length = 331

>gnl|CDD|152349 pfam11914, DUF3432, Domain of unknown function (DUF3432)

 Score = 39.7 bits (92), Expect = 2e-04
 Identities = 27/80 (33%), Positives = 39/80 (48%)

Query: 19 SIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASP 78
          +  +  SPN S   S   S  PSP A+  PSPV +   SP++S  PSPV +  PSP  + 
Sbjct: 5  APVSTASPNISIYSSSPVSSYPSPIATSYPSPVPTSYSSPVSSCYPSPVHTSFPSPSIAT 64

Query: 79 KPSPAASPNPRPLASPMPSA 98
               +      +A+  PS+
Sbjct: 65 TYPSVSPTFQTQVATSFPSS 84

This presumed domain is functionally uncharacterized. This domain is found in eukaryotes. This domain is about 100 amino acids in length. This domain is found associated with pfam00096. This domain has two conserved sequence motifs: YPSPV and PSP. Length = 100

>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional

 Score = 42.6 bits (100), Expect = 3e-04
 Identities = 21/81 (25%), Positives = 27/81 (33%), Gaps = 4/81 (4%)

Query: 23   PNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSP 82
            P        PS   + KP+  A P    +A P  S          A P   P   P+P  
Sbjct: 2858 PGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSR----STESFALPPDQPERPPQPQA 2913

Query: 83   AASPNPRPLASPMPSAKPALR 103
               P P+P   P P  +P   
Sbjct: 2914 PPPPQPQPQPPPPPQPQPPPP 2934

Length = 3151

>gnl|CDD|235906 PRK07003, PRK07003, DNA polymerase III subunits gamma and tau; Validated

 Score = 42.5 bits (100), Expect = 3e-04
 Identities = 18/95 (18%), Positives = 29/95 (30%), Gaps = 6/95 (6%)

Query: 17  PYSIANPNSPNASPKPSPVA----SPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKP 72
           P   A   +  A+  P   A    +   +P A+P P   A           P P  +   
Sbjct: 397 PAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANAR 456

Query: 73  SPLASPKPSPAASP--NPRPLASPMPSAKPALRAD 105
           +   S      A P  +    ++P   A P    +
Sbjct: 457 ASADSRCDERDAQPPADSGSASAPASDAPPDAAFE 491

Length = 830

>gnl|CDD|235906 PRK07003, PRK07003, DNA polymerase III subunits gamma and tau; Validated

 Score = 42.1 bits (99), Expect = 3e-04
 Identities = 17/85 (20%), Positives = 29/85 (34%), Gaps = 1/85 (1%)

Query: 21  ANPNSPNASP-KPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPK 79
           A      A P  P+P A+      A+   +PV +   +  ++         +P   +   
Sbjct: 418 AAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSA 477

Query: 80  PSPAASPNPRPLASPMPSAKPALRA 104
            +PA+   P     P P A     A
Sbjct: 478 SAPASDAPPDAAFEPAPRAAAPSAA 502

Length = 830

>gnl|CDD|237874 PRK14971, PRK14971, DNA polymerase III subunits gamma and tau; Provisional

 Score = 42.1 bits (99), Expect = 3e-04
 Identities = 19/67 (28%), Positives = 26/67 (38%), Gaps = 5/67 (7%)

Query: 36  ASPKPSPRASPKPS---PVASPKPS--PLASPKPSPVASPKPSPLASPKPSPAASPNPRP 90
           AS    P+   KP    P A+P+PS    ASP PS  ++            PA +P    
Sbjct: 369 ASGGRGPKQHIKPVFTQPAAAPQPSAAAAASPSPSQSSAAAQPSAPQSATQPAGTPPTVS 428

Query: 91  LASPMPS 97
           +  P   
Sbjct: 429 VDPPAAV 435

Length = 614

>gnl|CDD|236768 PRK10819, PRK10819, transport protein TonB; Provisional

 Score = 41.6 bits (98), Expect = 3e-04
 Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 23  PNSPNASPKPSPVASPKPSPRASPKPSPV----ASPKPSPLASPKPSPVASPKPSPLASP 78
           P  P  +P   P   PKP P+  PKP PV      PK   +   +P P +  + +  A P
Sbjct: 82  PEPPKEAPVVIPKPEPKPKPKPKPKPKPVKKVEEQPKR-EVKPVEPRPASPFENTAPARP 140

Query: 79  KPSPAASPNPRPLASPMPSAKPALRAD 105
             S A +   +P+ S     +   R  
Sbjct: 141 TSSTATAAASKPVTSVSSGPRALSRNQ 167

Length = 246

>gnl|CDD|237871 PRK14965, PRK14965, DNA polymerase III subunits gamma and tau; Provisional

 Score = 42.4 bits (100), Expect = 3e-04
 Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 4/76 (5%)

Query: 29  SPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSPAASPNP 88
           +P P   A   P+P A   P P A+P   P     P+  A+ +P+P A   P+ AA P  
Sbjct: 381 APAPPSAAWGAPTPAAPAAPPPAAAPPVPP---AAPARPAAARPAP-APAPPAAAAPPAR 436

Query: 89  RPLASPMPSAKPALRA 104
               +   SA    RA
Sbjct: 437 SADPAAAASAGDRWRA 452

Length = 576

>gnl|CDD|235124 PRK03427, PRK03427, cell division protein ZipA; Provisional

 Score = 41.9 bits (99), Expect = 3e-04
 Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 2/84 (2%)

Query: 19  SIANPNSPNASPKPS-PVASPKPSPRASPKPSPVASPKPSPLASPKPSPVAS-PKPSPLA 76
                  P  +P+P+ P   P   P   P+P        SP  +P P PV S P+P+  A
Sbjct: 108 PPEAQVPPQHAPRPAQPAPQPVQQPAYQPQPEQPLQQPVSPQVAPAPQPVHSAPQPAQQA 167

Query: 77  SPKPSPAASPNPRPLASPMPSAKP 100
                P A+P P P+A P P    
Sbjct: 168 FQPAEPVAAPQPEPVAEPAPVMDK 191

Length = 333

>gnl|CDD|237057 PRK12323, PRK12323, DNA polymerase III subunits gamma and tau; Provisional

 Score = 41.8 bits (98), Expect = 4e-04
 Identities = 22/83 (26%), Positives = 32/83 (38%), Gaps = 4/83 (4%)

Query: 25  SPNASPKPSPVASPKPSPRASPK----PSPVASPKPSPLASPKPSPVASPKPSPLASPKP 80
           +  A  + +P A+P P+    P     P   ASP P+   +     VA   P P  +   
Sbjct: 476 AAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATADPD 535

Query: 81  SPAASPNPRPLASPMPSAKPALR 103
               +  P P A+P P A  A  
Sbjct: 536 DAFETLAPAPAAAPAPRAAAATE 558

Length = 700

>gnl|CDD|223039 PHA03307, PHA03307, transcriptional regulator ICP4; Provisional

 Score = 42.5 bits (100), Expect = 4e-04
 Identities = 24/88 (27%), Positives = 32/88 (36%), Gaps = 1/88 (1%)

Query: 17  PYSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPK-PSPLASPKPSPVASPKPSPL 75
           P S     +P+ S    PV SP P P ASP  +  +     S  AS + + +    P   
Sbjct: 123 PASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEET 182

Query: 76  ASPKPSPAASPNPRPLASPMPSAKPALR 103
           A    SP A P P    +      P   
Sbjct: 183 ARAPSSPPAEPPPSTPPAAASPRPPRRS 210

Length = 1352

>gnl|CDD|218693 pfam05687, DUF822, Plant protein of unknown function (DUF822)

 Score = 40.2 bits (94), Expect = 4e-04
 Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)

Query: 33  SPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSPAASPNPR 89
              +S   SP +S + SPV+S  PSP+ S   SP +S  PSP +S    P +S    
Sbjct: 81  GAGSSATASPCSSYQLSPVSSAFPSPVPSYSASPASSSFPSP-SSLDSIPISSAASL 136

This family consists of the N terminal regions of several plant proteins of unknown function. Length = 151

>gnl|CDD|218693 pfam05687, DUF822, Plant protein of unknown function (DUF822)

 Score = 40.2 bits (94), Expect = 4e-04
 Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 23  PNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASP 78
                +S   SP +S + SP +S  PSPV S   SP +S  PSP  S    P++S 
Sbjct: 79  MEGAGSSATASPCSSYQLSPVSSAFPSPVPSYSASPASSSFPSPS-SLDSIPISSA 133

This family consists of the N terminal regions of several plant proteins of unknown function. Length = 151

>gnl|CDD|184918 PRK14954, PRK14954, DNA polymerase III subunits gamma and tau; Provisional

 Score = 41.9 bits (98), Expect = 4e-04
 Identities = 18/75 (24%), Positives = 23/75 (30%)

Query: 26  PNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSPAAS 85
            +    PSP  SP    +A     P     P P     P    +  PSP ++P P     
Sbjct: 376 NDGGVAPSPAGSPDVKKKAPEPDLPQPDRHPGPAKPEAPGARPAELPSPASAPTPEQQPP 435

Query: 86  PNPRPLASPMPSAKP 100
                   P P A  
Sbjct: 436 VARSAPLPPSPQASA 450

Length = 620

>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional

 Score = 41.8 bits (98), Expect = 5e-04
 Identities = 21/74 (28%), Positives = 31/74 (41%)

Query: 28  ASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSPAASPN 87
           A+P          +  A+P P+ V +P P+P+ +  P P A+P PS        PA  P 
Sbjct: 392 ATPFARGPGGDDQTRPAAPVPASVPTPAPTPVPASAPPPPATPLPSAEPGSDDGPAPPPE 451

Query: 88  PRPLASPMPSAKPA 101
            +P A     A   
Sbjct: 452 RQPPAPATEPAPDD 465

Length = 3151

>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional

 Score = 41.8 bits (98), Expect = 5e-04
 Identities = 21/69 (30%), Positives = 30/69 (43%)

Query: 36  ASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSPAASPNPRPLASPM 95
           A+P P+   +P P+PV +  P P A+P PS        P   P+  P A         P 
Sbjct: 408 AAPVPASVPTPAPTPVPASAPPPPATPLPSAEPGSDDGPAPPPERQPPAPATEPAPDDPD 467

Query: 96  PSAKPALRA 104
            + + AL A
Sbjct: 468 DATRKALDA 476

Length = 3151

>gnl|CDD|236382 PRK09111, PRK09111, DNA polymerase III subunits gamma and tau; Validated

 Score = 41.4 bits (98), Expect = 5e-04
 Identities = 14/70 (20%), Positives = 23/70 (32%)

Query: 32  PSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSPAASPNPRPL 91
           P         P          +   +P A+        P  +  A P  + AA+  P P 
Sbjct: 391 PPSPGGGGGGPPGGGGAPGAPAAAAAPGAAAAAPAAGGPAAALAAVPDAAAAAAAPPAPA 450

Query: 92  ASPMPSAKPA 101
           A+P P+ +  
Sbjct: 451 AAPQPAVRLN 460

Length = 598

>gnl|CDD|237862 PRK14948, PRK14948, DNA polymerase III subunits gamma and tau; Provisional

 Score = 41.5 bits (98), Expect = 6e-04
 Identities = 21/76 (27%), Positives = 26/76 (34%), Gaps = 3/76 (3%)

Query: 19  SIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASP 78
           S     S  A+P P+P  SP P+P     P    +         K SP   P P P    
Sbjct: 366 SEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATTPSPPPAKASP---PIPVPAEPT 422

Query: 79  KPSPAASPNPRPLASP 94
           +PSP    N       
Sbjct: 423 EPSPTPPANAANAPPS 438

Length = 620

>gnl|CDD|114603 pfam05887, Trypan_PARP, Procyclic acidic repetitive protein (PARP)

 Score = 39.6 bits (91), Expect = 6e-04
 Identities = 15/71 (21%), Positives = 25/71 (35%)

Query: 20  IANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPK 79
           +   ++    P   P    +P P    +  P    +      P+ +    P+P P   P+
Sbjct: 50  VGADDTNGTDPDDEPEEEEEPEPEEEGEEEPEPEEEGEEEPEPEETGEEEPEPEPEPEPE 109

Query: 80  PSPAASPNPRP 90
           P P   P P P
Sbjct: 110 PEPEPEPEPEP 120

This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated. Length = 145

>gnl|CDD|166942 PRK00404, tatB, sec-independent translocase; Provisional

 Score = 39.4 bits (92), Expect = 6e-04
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 3/67 (4%)

Query: 20  IANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPK 79
           I  P +P A P+P    + +    A P P P ++P   P  +     V +P  +P  S  
Sbjct: 78  ILAPLTPPAPPEPVTPPTAQSPAPAVPTPPPTSTPAVPPAPAA---AVPAPAAAPPPSDP 134

Query: 80  PSPAASP 86
           P P  +P
Sbjct: 135 PQPPRAP 141

Length = 141

>gnl|CDD|233045 TIGR00601, rad23, UV excision repair protein Rad23

 Score = 41.0 bits (96), Expect = 6e-04
 Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 5/66 (7%)

Query: 35  VASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSPAASPNPRPLASP 94
           VA P  +P ++P P+P     P+   S  P+     K     SP    A +  P   ++ 
Sbjct: 84  VAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEK-----SPSEESATATAPESPSTS 138

Query: 95  MPSAKP 100
           +PS+  
Sbjct: 139 VPSSGS 144

All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University) [DNA metabolism, DNA replication, recombination, and repair]. Length = 378

>gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated

 Score = 41.1 bits (97), Expect = 8e-04
 Identities = 18/84 (21%), Positives = 28/84 (33%), Gaps = 1/84 (1%)

Query: 21  ANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKP 80
           A P    A+P+  P     P         P  +   +P A+P P+P  +   +P  +   
Sbjct: 641 AAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAP-AAPPPAPAPAAPAAPAGAAPA 699

Query: 81  SPAASPNPRPLASPMPSAKPALRA 104
            PA +P   P A            
Sbjct: 700 QPAPAPAATPPAGQADDPAAQPPQ 723

Length = 824

>gnl|CDD|184918 PRK14954, PRK14954, DNA polymerase III subunits gamma and tau; Provisional

 Score = 41.1 bits (96), Expect = 8e-04
 Identities = 19/78 (24%), Positives = 29/78 (37%), Gaps = 3/78 (3%)

Query: 17  PYSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPK--PSPLASPKPSPVASPKPSP 74
           P    +P+    +P+P      +    A P+ +P A P   PSP ++P P        S 
Sbjct: 382 PSPAGSPDVKKKAPEPDLPQPDRHPGPAKPE-APGARPAELPSPASAPTPEQQPPVARSA 440

Query: 75  LASPKPSPAASPNPRPLA 92
              P P  +A  N     
Sbjct: 441 PLPPSPQASAPRNVASGK 458

Length = 620

>gnl|CDD|237865 PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional

 Score = 40.9 bits (96), Expect = 9e-04
 Identities = 32/135 (23%), Positives = 50/135 (37%), Gaps = 12/135 (8%)

Query: 17  PYSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLAS---PKPSPVASPKPS 73
           P   A P +  ++P   P A+P     A    +P A+P  +P A    P P   A+P+  
Sbjct: 401 PAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQAAPETV 460

Query: 74  PL---ASPKPSPAASPNPRPLASPMPSAKPALRADYYKTTCPDF---EKI---VREFVHQ 124
            +    +P+P+ A++      A       P    D +  T       E I    RE   Q
Sbjct: 461 AIPVRVAPEPAVASAAPAPAAAPAAARLTPTEEGDVWHATVQQLAAAEAITALARELALQ 520

Query: 125 KQTQSPSTAAGALRV 139
            +  +       LRV
Sbjct: 521 SELVARDGDQWLLRV 535

Length = 618

>gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated

 Score = 41.1 bits (97), Expect = 9e-04
 Identities = 20/87 (22%), Positives = 31/87 (35%), Gaps = 1/87 (1%)

Query: 19  SIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASP 78
                  P A   P+  A+P P+  A+  P+  ++     +A+P+  P     P      
Sbjct: 608 PPEEAARPAAPAAPAAPAAPAPAGAAAA-PAEASAAPAPGVAAPEHHPKHVAVPDASDGG 666

Query: 79  KPSPAASPNPRPLASPMPSAKPALRAD 105
              PA +    P A P   A  A  A 
Sbjct: 667 DGWPAKAGGAAPAAPPPAPAPAAPAAP 693

Length = 824

>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional

 Score = 41.1 bits (96), Expect = 0.001
 Identities = 27/94 (28%), Positives = 34/94 (36%), Gaps = 9/94 (9%)

Query: 17   PYSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPS-----PVASPK 71
            P   A P +    P P+P A+P   P        VAS   S  + P P      P A   
Sbjct: 2754 PARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLA 2813

Query: 72   PSPLASPKPSPAA----SPNPRPLASPMPSAKPA 101
            P+    P  SPA       + +P A P P   P 
Sbjct: 2814 PAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPP 2847

Length = 3151

>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional

 Score = 40.7 bits (95), Expect = 0.001
 Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 4/88 (4%)

Query: 17   PYSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLA 76
            P   A P  P     P+  A P P+    P P+P A+P   P        VAS   S  +
Sbjct: 2739 PAPPAVPAGPATPGGPARPARP-PTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRES 2797

Query: 77   SP---KPSPAASPNPRPLASPMPSAKPA 101
             P    P+   +    P A+  P+A PA
Sbjct: 2798 LPSPWDPADPPAAVLAPAAALPPAASPA 2825

Length = 3151

>gnl|CDD|235906 PRK07003, PRK07003, DNA polymerase III subunits gamma and tau; Validated

 Score = 40.6 bits (95), Expect = 0.001
 Identities = 23/91 (25%), Positives = 33/91 (36%), Gaps = 6/91 (6%)

Query: 19  SIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASP 78
           + A+        +P   +    +P +   P     P P   A    +P A P     A+ 
Sbjct: 457 ASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAA 516

Query: 79  K----PSPAASPNPRPLASPMPSA-KPALRA 104
                P+ AA P P     P P+A  PA RA
Sbjct: 517 SREDAPAAAAPPAPE-ARPPTPAAAAPAARA 546

Length = 830

>gnl|CDD|114603 pfam05887, Trypan_PARP, Procyclic acidic repetitive protein (PARP)

 Score = 38.4 bits (88), Expect = 0.001
 Identities = 16/75 (21%), Positives = 23/75 (30%)

Query: 40  PSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSPAASPNPRPLASPMPSAK 99
           P      +  P    +      P+      P+P      +P P   P P P   P P  +
Sbjct: 60  PDDEPEEEEEPEPEEEGEEEPEPEEEGEEEPEPEETGEEEPEPEPEPEPEPEPEPEPEPE 119

Query: 100 PALRADYYKTTCPDF 114
           P   A   K+    F
Sbjct: 120 PEPGAATLKSVALPF 134

This family consists of several Trypanosoma brucei procyclic acidic repetitive protein (PARP) like sequences. The procyclic acidic repetitive protein (parp) genes of Trypanosoma brucei encode a small family of abundant surface proteins whose expression is restricted to the procyclic form of the parasite. They are found at two unlinked loci, parpA and parpB; transcription of both loci is developmentally regulated. Length = 145

>gnl|CDD|215533 PLN02983, PLN02983, biotin carboxyl carrier protein of acetyl-CoA carboxylase

 Score = 40.2 bits (94), Expect = 0.001
 Identities = 26/68 (38%), Positives = 29/68 (42%), Gaps = 3/68 (4%)

Query: 28  ASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSPAASPN 87
           A P+P P A         P P     P   P A P PS  AS  P   ASP P+ A   +
Sbjct: 140 ALPQPPPPAPVVMMQ---PPPPHAMPPASPPAAQPAPSAPASSPPPTPASPPPAKAPKSS 196

Query: 88  PRPLASPM 95
             PL SPM
Sbjct: 197 HPPLKSPM 204

Length = 274

>gnl|CDD|218191 pfam04652, DUF605, Vta1 like

 Score = 40.1 bits (94), Expect = 0.001
 Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 4/86 (4%)

Query: 13  FISIPYSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKP 72
           F S P   ++P+  +  P PS   S  P P      +P   P P+    P P PV    P
Sbjct: 197 FPSPPEDPSSPSDSSLPPAPSSFQSDTPPPSPESPTNPSPPPGPAA---PPPPPVQQVPP 253

Query: 73  SPLASPKPSPAASPNPRPLASPMPSA 98
              A P P  A++  P P+       
Sbjct: 254 LSTAKPTPPSASAT-PAPIGGITLDD 278

Vta1 (VPS20-associated protein 1) is a positive regulator of Vps4. Vps4 is an ATPase that is required in the multivesicular body (MVB) sorting pathway to dissociate the endosomal sorting complex required for transport (ESCRT). Vta1 promotes correct assembly of Vps4 and stimulates its ATPase activity through its conserved Vta1/SBP1/LIP5 region. Length = 315

>gnl|CDD|218191 pfam04652, DUF605, Vta1 like

 Score = 40.1 bits (94), Expect = 0.001
 Identities = 28/82 (34%), Positives = 34/82 (41%), Gaps = 1/82 (1%)

Query: 21  ANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKP 80
               SP+  P  SP     PSP   P     +S  P+P +    +P  SP+     SP P
Sbjct: 179 PASASPSDPPSSSPGVPSFPSPPEDPSSPSDSSLPPAPSSFQSDTPPPSPESPTNPSPPP 238

Query: 81  SPAASPNPRPLASPMPS-AKPA 101
            PAA P P     P  S AKP 
Sbjct: 239 GPAAPPPPPVQQVPPLSTAKPT 260

Vta1 (VPS20-associated protein 1) is a positive regulator of Vps4. Vps4 is an ATPase that is required in the multivesicular body (MVB) sorting pathway to dissociate the endosomal sorting complex required for transport (ESCRT). Vta1 promotes correct assembly of Vps4 and stimulates its ATPase activity through its conserved Vta1/SBP1/LIP5 region. Length = 315

>gnl|CDD|218658 pfam05616, Neisseria_TspB, Neisseria meningitidis TspB protein

 Score = 40.7 bits (95), Expect = 0.001
 Identities = 19/88 (21%), Positives = 28/88 (31%), Gaps = 1/88 (1%)

Query: 21  ANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPK- 79
            +  +P A P P    +  P+   +P+ +P   P P P     P         P   P  
Sbjct: 322 GSAEAPEAQPLPEVSPAENPANNPNPRENPGTRPNPEPDPDLNPDANPDTDGQPGTRPDS 381

Query: 80  PSPAASPNPRPLASPMPSAKPALRADYY 107
           P+    PN R            L  D +
Sbjct: 382 PAVPDRPNGRHRKERKEGEDGGLLCDLF 409

This family consists of several Neisseria meningitidis TspB virulence factor proteins. Length = 502

>gnl|CDD|215130 PLN02217, PLN02217, probable pectinesterase/pectinesterase inhibitor

 Score = 40.5 bits (94), Expect = 0.001
 Identities = 32/84 (38%), Positives = 40/84 (47%), Gaps = 3/84 (3%)

Query: 19  SIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASP 78
           S A+ N+  +S  PS V +P  SP A    SP A+  PS + SP  SP AS   SP  +P
Sbjct: 576 SAASSNTTFSSDSPSTVVAPSTSPPAGHLGSPPAT--PSKIVSPSTSPPASHLGSPSTTP 633

Query: 79  -KPSPAASPNPRPLASPMPSAKPA 101
             P  +        ASP  S K A
Sbjct: 634 SSPESSIKVASTETASPESSIKVA 657

Length = 670

>gnl|CDD|182059 PRK09752, PRK09752, adhesin; Provisional

 Score = 40.4 bits (94), Expect = 0.001
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)

Query: 59  LASPKPSPVASPKPSPLASPKPSPAASPNPRPLASPMPSAKPALRA 104
           L S + +P + P P P  +P P P   P+P P   P P+ +P L A
Sbjct: 913 LRSQEVTPPSPPDPDP--TPDPDPTPDPDPTPDPEPTPAYQPVLNA 956

Length = 1250

>gnl|CDD|184927 PRK14963, PRK14963, DNA polymerase III subunits gamma and tau; Provisional

 Score = 40.2 bits (94), Expect = 0.001
 Identities = 18/104 (17%), Positives = 34/104 (32%), Gaps = 1/104 (0%)

Query: 12  AFISIPYSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPK 71
           A ++ P       +   +     V S + +P A+   +    P   P     P+P  +  
Sbjct: 351 AAVAPPAPAPADLTQRLNRLEKEVRSLRSAPTAAATAAGAPLPDFDPRPRGPPAPEPARS 410

Query: 72  PSPLASPKPSPAASPNPRPLASPMPSAKPALRADYYKTTCPDFE 115
                   P+ A +         + + K  LRA + +   P  E
Sbjct: 411 AEAPPLVAPAAAPAGLALRWRDVLAALKMQLRA-FLREARPHVE 453

Length = 504

>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional

 Score = 40.3 bits (94), Expect = 0.002
 Identities = 23/94 (24%), Positives = 28/94 (29%), Gaps = 8/94 (8%)

Query: 15   SIPYSIANPNSPNASPKP--------SPVASPKPSPRASPKPSPVASPKPSPLASPKPSP 66
            + P +   P  P     P          V    PS   + KP+  A P    LA P  S 
Sbjct: 2834 AQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSR 2893

Query: 67   VASPKPSPLASPKPSPAASPNPRPLASPMPSAKP 100
                   P   P+  P     P P   P P   P
Sbjct: 2894 STESFALPPDQPERPPQPQAPPPPQPQPQPPPPP 2927

Length = 3151

>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional

 Score = 40.3 bits (94), Expect = 0.002
 Identities = 17/88 (19%), Positives = 25/88 (28%)

Query: 17   PYSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLA 76
            P   +    P+A P+ +   +P         P+P +   P   A   P P  SP  +   
Sbjct: 2580 PAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPD 2639

Query: 77   SPKPSPAASPNPRPLASPMPSAKPALRA 104
               P     P                RA
Sbjct: 2640 PHPPPTVPPPERPRDDPAPGRVSRPRRA 2667

Length = 3151

>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional

 Score = 39.9 bits (93), Expect = 0.002
 Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 8/90 (8%)

Query: 17   PYSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLA 76
            P     P  P A P P P   P P P+  P+P P   P+P P  +P   P  + +PS  A
Sbjct: 2902 PDQPERPPQPQAPPPPQPQPQPPPPPQ--PQPPPPPPPRPQPPLAPTTDPAGAGEPSG-A 2958

Query: 77   SPKP-----SPAASPNPRPLASPMPSAKPA 101
             P+P      P     PR        ++ A
Sbjct: 2959 VPQPWLGALVPGRVAVPRFRVPQPAPSREA 2988

Length = 3151

>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional

 Score = 39.9 bits (93), Expect = 0.002
 Identities = 20/83 (24%), Positives = 30/83 (36%), Gaps = 16/83 (19%)

Query: 23   PNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASP------------ 70
            P  P   P+P P   P+P P   P+P P  +P   P  + +PS                 
Sbjct: 2914 PPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVA 2973

Query: 71   ----KPSPLASPKPSPAASPNPR 89
                +    A  + +PA+S  P 
Sbjct: 2974 VPRFRVPQPAPSREAPASSTPPL 2996

Length = 3151

>gnl|CDD|237864 PRK14950, PRK14950, DNA polymerase III subunits gamma and tau; Provisional

 Score = 39.4 bits (92), Expect = 0.002
 Identities = 22/73 (30%), Positives = 28/73 (38%), Gaps = 10/73 (13%)

Query: 36  ASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPS-----PLASPKPSPAASPN--P 88
           A   P P   P     A+P P     P P+P   PK +     P   P    A  P   P
Sbjct: 358 ALLVPVPAPQPAKPTAAAPSP---VRPTPAPSTRPKAAAAANIPPKEPVRETATPPPVPP 414

Query: 89  RPLASPMPSAKPA 101
           RP+A P+P    +
Sbjct: 415 RPVAPPVPHTPES 427

Length = 585

>gnl|CDD|236768 PRK10819, PRK10819, transport protein TonB; Provisional

 Score = 39.3 bits (92), Expect = 0.002
 Identities = 29/110 (26%), Positives = 41/110 (37%), Gaps = 16/110 (14%)

Query: 8   VIFLAFISIPYSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASP-KPSPLASPKPSP 66
           VI L   + P S+      +  P  +    P+P     P+P P+  P K +P+  PKP P
Sbjct: 38  VIELPAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPVVIPKPEP 97

Query: 67  VASPKPSP---------------LASPKPSPAASPNPRPLASPMPSAKPA 101
              PKP P               +   +P PA+       A P  S   A
Sbjct: 98  KPKPKPKPKPKPVKKVEEQPKREVKPVEPRPASPFENTAPARPTSSTATA 147

Length = 246

>gnl|CDD|235124 PRK03427, PRK03427, cell division protein ZipA; Provisional

 Score = 39.2 bits (92), Expect = 0.002
 Identities = 24/84 (28%), Positives = 32/84 (38%), Gaps = 4/84 (4%)

Query: 17  PYSIANPNSPNASPKPSPVASPKP-SPRASPKPSPVASPKPSPLASPKPSPVASPKPSPL 75
           P     P  P   P   P   P+P  P   P    VA       ++P+P+  A     P+
Sbjct: 115 PQHAPRPAQPAPQPVQQPAYQPQPEQPLQQPVSPQVAPAPQPVHSAPQPAQQAFQPAEPV 174

Query: 76  ASPKPSPAASPNPRPLASPMPSAK 99
           A+P+P P A P P       P  K
Sbjct: 175 AAPQPEPVAEPAP---VMDKPKRK 195

Length = 333

>gnl|CDD|233045 TIGR00601, rad23, UV excision repair protein Rad23

 Score = 39.9 bits (93), Expect = 0.002
 Identities = 13/66 (19%), Positives = 26/66 (39%), Gaps = 3/66 (4%)

Query: 28  ASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSPAASPN 87
           A P  +P ++P P+P     P+   S  P+     K       + +   +P+    + P+
Sbjct: 85  APPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPS---EESATATAPESPSTSVPS 141

Query: 88  PRPLAS 93
               A+
Sbjct: 142 SGSDAA 147

All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University) [DNA metabolism, DNA replication, recombination, and repair]. Length = 378

>gnl|CDD|184927 PRK14963, PRK14963, DNA polymerase III subunits gamma and tau; Provisional

 Score = 39.4 bits (92), Expect = 0.002
 Identities = 19/98 (19%), Positives = 27/98 (27%), Gaps = 2/98 (2%)

Query: 25  SPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSPAA 84
               +P     A          K        P+  A+   +P+    P P   P P PA 
Sbjct: 350 VAAVAPPAPAPADLTQRLNRLEKEVRSLRSAPTAAATAAGAPLPDFDPRPRGPPAPEPAR 409

Query: 85  SPNPRPL--ASPMPSAKPALRADYYKTTCPDFEKIVRE 120
           S    PL   +  P+       D            +RE
Sbjct: 410 SAEAPPLVAPAAAPAGLALRWRDVLAALKMQLRAFLRE 447

Length = 504

>gnl|CDD|237082 PRK12373, PRK12373, NADH dehydrogenase subunit E; Provisional

 Score = 39.8 bits (93), Expect = 0.002
 Identities = 23/79 (29%), Positives = 31/79 (39%), Gaps = 2/79 (2%)

Query: 26  PNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKP-SPAA 84
           P  +P     A   PS  A PK +   +       +  P   A    +P A P   + AA
Sbjct: 229 PLLAPWQGDAAPVPPSEAARPKSADAETNAALKTPATAPKAAAKNAKAPEAQPVSGTAAA 288

Query: 85  SPNPRPLASPM-PSAKPAL 102
            P P+  A     +AKPAL
Sbjct: 289 EPAPKEAAKAAAAAAKPAL 307

Length = 400

>gnl|CDD|173829 cd08201, plant_peroxidase_like_1, Uncharacterized family of plant peroxidase-like proteins

 Score = 39.4 bits (92), Expect = 0.002
 Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 5/85 (5%)

Query: 197 SCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASK 256
           S AD++       V   GGP      GR D   +  A +P   P  +  +    + F  +
Sbjct: 99  SMADLIAMGVVTSVASCGGPVVPFRAGRIDATEAGQAGVPE--PQTD--LGTTTESFRRQ 154

Query: 257 GFSIQEYVALMG-AHTIGFAHCKEF 280
           GFS  E +AL+   HT+G  H ++F
Sbjct: 155 GFSTSEMIALVACGHTLGGVHSEDF 179

This is a subgroup of heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX) which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Length = 264

>gnl|CDD|235904 PRK06995, flhF, flagellar biosynthesis regulator FlhF; Validated

 Score = 39.9 bits (94), Expect = 0.002
 Identities = 21/87 (24%), Positives = 32/87 (36%), Gaps = 5/87 (5%)

Query: 17  PYSIANPNSPNASPKPSPVASPKPS--PRASPKPSPVASPKPSPLASPKPSPVASPKPSP 74
           P +++ P +P A P P  V   K     R        A   P   A   P+  A+ + + 
Sbjct: 70  PAAVSRPAAPAAEPAPWLVEHAKRLTAQREQLVARAAAPAAPEAQAPAAPAERAAAENAA 129

Query: 75  LASPKPSPAASPNPRPLASPMPSAKPA 101
               + + AA   PRP      +A  A
Sbjct: 130 RRLARAAAAA---PRPRVPADAAAAVA 153

Length = 484

>gnl|CDD|185628 PTZ00449, PTZ00449, 104 kDa microneme/rhoptry antigen; Provisional

 Score = 39.7 bits (92), Expect = 0.002
 Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 4/97 (4%)

Query: 15  SIPYSIANPNSPNASPKP-SPVASPKPSPRASPK-PSPVASPKPSPLASPKPSPVASPKP 72
             P    +P  P    KP  P ++ +P+   SPK P  +  PK         SP   P P
Sbjct: 580 EFPKDPKHPKDPEEPKKPKRPRSAQRPTRPKSPKLPELLDIPKSPKRPESPKSPKRPPPP 639

Query: 73  SPLASPK--PSPAASPNPRPLASPMPSAKPALRADYY 107
              +SP+    P    +P+P  SP P   P  +  +Y
Sbjct: 640 QRPSSPERPEGPKIIKSPKPPKSPKPPFDPKFKEKFY 676

Length = 943

>gnl|CDD|165468 PHA03201, PHA03201, uracil DNA glycosylase; Provisional

 Score = 39.1 bits (91), Expect = 0.002
 Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 7/74 (9%)

Query: 23 PNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSP-VASPKPSPLASPKPS 81
            S + SP P   + P+P+P  SP  SP  +P   P    +P P  A+   +P   P+  
Sbjct: 4  ARSRSPSP-PRRPSPPRPTPPRSPDASPEETPPSPPGPGAEPPPGRAAGPAAPRRRPRGC 62

Query: 82 PA-----ASPNPRP 90
          PA     +S  PRP
Sbjct: 63 PAGVTFSSSAPPRP 76

Length = 318

>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional

 Score = 39.5 bits (92), Expect = 0.003
 Identities = 24/86 (27%), Positives = 31/86 (36%), Gaps = 2/86 (2%)

Query: 17   PYSIANPNSPNASPKP-SPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPS-P 74
            P   A P  P    +P +    P P+P A+P   P        +AS   S  + P P  P
Sbjct: 2745 PAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDP 2804

Query: 75   LASPKPSPAASPNPRPLASPMPSAKP 100
               P    A +    P ASP     P
Sbjct: 2805 ADPPAAVLAPAAALPPAASPAGPLPP 2830

Length = 3151

>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional

 Score = 39.5 bits (92), Expect = 0.003
 Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 1/84 (1%)

Query: 21  ANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKP 80
             P   + +   +PV +  P+P  +P P+    P  +PL S +P     P P P   P P
Sbjct: 397 RGPGGDDQTRPAAPVPASVPTPAPTPVPASAPPPPATPLPSAEPGSDDGPAPPPERQP-P 455

Query: 81  SPAASPNPRPLASPMPSAKPALRA 104
           +PA  P P         A  ALR 
Sbjct: 456 APATEPAPDDPDDATRKALDALRE 479

Length = 3151

>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional

 Score = 39.5 bits (92), Expect = 0.003
 Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 5/90 (5%)

Query: 15   SIPYSIANPNSPNASPKPS----PVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASP 70
            + P + A P +P A P        VAS   S  + P P    +  P+ + +P  +   + 
Sbjct: 2764 AGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSP-WDPADPPAAVLAPAAALPPAA 2822

Query: 71   KPSPLASPKPSPAASPNPRPLASPMPSAKP 100
             P+    P  S   +  P P   P PS   
Sbjct: 2823 SPAGPLPPPTSAQPTAPPPPPGPPPPSLPL 2852

Length = 3151

>gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated

 Score = 39.2 bits (92), Expect = 0.003
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 1/76 (1%)

Query: 30  PKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSPAASPNPR 89
                  +P  +  ++   +P A+P P+  A+P  +   +P  +P  +P P+PA +P   
Sbjct: 386 GVAGGAGAPAAAAPSAAAAAPAAAPAPAA-AAPAAAAAPAPAAAPQPAPAPAPAPAPPSP 444

Query: 90  PLASPMPSAKPALRAD 105
              +P   A     A 
Sbjct: 445 AGNAPAGGAPSPPPAA 460

Length = 824

>gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated

 Score = 39.2 bits (92), Expect = 0.003
 Identities = 20/88 (22%), Positives = 31/88 (35%), Gaps = 1/88 (1%)

Query: 17  PYSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLA 76
           P   A  + P     P         P  +   +P A P P+P  +   +P  +    P  
Sbjct: 645 PGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPP-PAPAPAAPAAPAGAAPAQPAP 703

Query: 77  SPKPSPAASPNPRPLASPMPSAKPALRA 104
           +P  +P A     P A P  +A+ A   
Sbjct: 704 APAATPPAGQADDPAAQPPQAAQGASAP 731

Length = 824

>gnl|CDD|237057 PRK12323, PRK12323, DNA polymerase III subunits gamma and tau; Provisional

 Score = 39.5 bits (92), Expect = 0.003
 Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 1/74 (1%)

Query: 28  ASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSPAASPN 87
           ASP P+   +      A   P P  +       +  P+P A+P P   A+ +P  A  P 
Sbjct: 507 ASPAPAQPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRP- 565

Query: 88  PRPLASPMPSAKPA 101
           PR  AS +P     
Sbjct: 566 PRASASGLPDMFDG 579

Length = 700

>gnl|CDD|237057 PRK12323, PRK12323, DNA polymerase III subunits gamma and tau; Provisional

 Score = 39.1 bits (91), Expect = 0.003
 Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 17/97 (17%)

Query: 22  NPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVA------------- 68
              +  A+   +PVA P P+  A   P+  A    +P A+P  +P A             
Sbjct: 369 GGGAGPATAAAAPVAQPAPAAAA---PAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPAR 425

Query: 69  -SPKPSPLASPKPSPAASPNPRPLASPMPSAKPALRA 104
            SP P  LA+ + + A  P   P  +P P+A PA  A
Sbjct: 426 RSPAPEALAAARQASARGPGGAPAPAPAPAAAPAAAA 462

Length = 700

>gnl|CDD|235906 PRK07003, PRK07003, DNA polymerase III subunits gamma and tau; Validated

 Score = 39.4 bits (92), Expect = 0.003
 Identities = 18/100 (18%), Positives = 29/100 (29%), Gaps = 9/100 (9%)

Query: 15  SIPYSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPL---------ASPKPS 65
             P          A P P   A+      A P  + V     + L         A+   +
Sbjct: 366 GAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEA 425

Query: 66  PVASPKPSPLASPKPSPAASPNPRPLASPMPSAKPALRAD 105
           P A+P P   A      A    P P  +   ++  +   +
Sbjct: 426 PPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDE 465

Length = 830

>gnl|CDD|237862 PRK14948, PRK14948, DNA polymerase III subunits gamma and tau; Provisional

 Score = 39.2 bits (92), Expect = 0.003
 Identities = 20/73 (27%), Positives = 25/73 (34%), Gaps = 3/73 (4%)

Query: 32  PSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPK---PSPLASPKPSPAASPNP 88
           PS   S   +  A   P+P  +P P P      +P        PSP  +    P   P  
Sbjct: 361 PSAFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATTPSPPPAKASPPIPVPAE 420

Query: 89  RPLASPMPSAKPA 101
               SP P A  A
Sbjct: 421 PTEPSPTPPANAA 433

Length = 620

>gnl|CDD|237862 PRK14948, PRK14948, DNA polymerase III subunits gamma and tau; Provisional

 Score = 39.2 bits (92), Expect = 0.003
 Identities = 17/78 (21%), Positives = 28/78 (35%)

Query: 15  SIPYSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSP 74
           +        + P  +P P        +P  +P P P  + + S  A  +    +SP P  
Sbjct: 521 AKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPI 580

Query: 75  LASPKPSPAASPNPRPLA 92
              P PSP    +P  + 
Sbjct: 581 PEEPTPSPTKDSSPEEID 598

Length = 620

>gnl|CDD|223039 PHA03307, PHA03307, transcriptional regulator ICP4; Provisional

 Score = 39.4 bits (92), Expect = 0.003
 Identities = 20/75 (26%), Positives = 30/75 (40%)

Query: 15  SIPYSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSP 74
           +   S ++  S ++S   S  +S   +    P PS   SP   P  +   SP   P+PS 
Sbjct: 314 ASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSR 373

Query: 75  LASPKPSPAASPNPR 89
             S   + A  P  R
Sbjct: 374 APSSPAASAGRPTRR 388

Length = 1352

>gnl|CDD|237871 PRK14965, PRK14965, DNA polymerase III subunits gamma and tau; Provisional

 Score = 39.3 bits (92), Expect = 0.003
 Identities = 23/97 (23%), Positives = 33/97 (34%), Gaps = 2/97 (2%)

Query: 43  RASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSPAASPNPRPLASPMPS-AKPA 101
           R +P P   A   P+P A   P P A+P   P A+P    AA P P P      +    +
Sbjct: 379 RGAPAPPSAAWGAPTPAAPAAPPPAAAPPVPP-AAPARPAAARPAPAPAPPAAAAPPARS 437

Query: 102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALR 138
                  +    +   V     +K     S   G+  
Sbjct: 438 ADPAAAASAGDRWRAFVAFVKGKKPALGASLEQGSPL 474

Length = 576

>gnl|CDD|237871 PRK14965, PRK14965, DNA polymerase III subunits gamma and tau; Provisional

 Score = 39.0 bits (91), Expect = 0.003
 Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 6/86 (6%)

Query: 17  PYSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLA 76
           P +     +P A   P P A+P P P A+P     A P P+P      +P     P+  A
Sbjct: 385 PSAAWGAPTPAAPAAPPPAAAP-PVPPAAPARPAAARPAPAPAPPAAAAP-----PARSA 438

Query: 77  SPKPSPAASPNPRPLASPMPSAKPAL 102
            P  + +A    R   + +   KPAL
Sbjct: 439 DPAAAASAGDRWRAFVAFVKGKKPAL 464

Length = 576

>gnl|CDD|218693 pfam05687, DUF822, Plant protein of unknown function (DUF822)

 Score = 37.5 bits (87), Expect = 0.003
 Identities = 21/76 (27%), Positives = 30/76 (39%), Gaps = 1/76 (1%)

Query: 37  SPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSPAASPNPRPLASPM- 95
             K            +S   SP +S + SPV+S  PSP+ S   SPA+S  P P +    
Sbjct: 69  YRKGCKPLERMEGAGSSATASPCSSYQLSPVSSAFPSPVPSYSASPASSSFPSPSSLDSI 128

Query: 96  PSAKPALRADYYKTTC 111
           P +  A    +     
Sbjct: 129 PISSAASLLPWLSVLS 144

This family consists of the N terminal regions of several plant proteins of unknown function. Length = 151

>gnl|CDD|218191 pfam04652, DUF605, Vta1 like

 Score = 38.9 bits (91), Expect = 0.003
 Identities = 23/87 (26%), Positives = 30/87 (34%), Gaps = 4/87 (4%)

Query: 15  SIPYSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSP 74
                 ++P  P+    P   +SP  S    P PS   S  P P      +P   P P+ 
Sbjct: 184 PSDPPSSSPGVPSFPSPPEDPSSPSDSS-LPPAPSSFQSDTPPPSPESPTNPSPPPGPAA 242

Query: 75  LASPKPSPAASPNPRPLASPMPSAKPA 101
              P P P     P   A P P +  A
Sbjct: 243 ---PPPPPVQQVPPLSTAKPTPPSASA 266

Vta1 (VPS20-associated protein 1) is a positive regulator of Vps4. Vps4 is an ATPase that is required in the multivesicular body (MVB) sorting pathway to dissociate the endosomal sorting complex required for transport (ESCRT). Vta1 promotes correct assembly of Vps4 and stimulates its ATPase activity through its conserved Vta1/SBP1/LIP5 region. Length = 315

>gnl|CDD|235904 PRK06995, flhF, flagellar biosynthesis regulator FlhF; Validated

 Score = 39.2 bits (92), Expect = 0.003
 Identities = 17/92 (18%), Positives = 25/92 (27%), Gaps = 3/92 (3%)

Query: 12  AFISIPYSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPS--PLASPKPSPVAS 69
           A      +      P  +  P+ V+ P  +P A P P  V   K              A 
Sbjct: 50  ALAPPAAAAPAAAQPPPAAAPAAVSRP-AAPAAEPAPWLVEHAKRLTAQREQLVARAAAP 108

Query: 70  PKPSPLASPKPSPAASPNPRPLASPMPSAKPA 101
             P   A   P+  A+           +A   
Sbjct: 109 AAPEAQAPAAPAERAAAENAARRLARAAAAAP 140

Length = 484

>gnl|CDD|223880 COG0810, TonB, Periplasmic protein TonB, links inner and outer membranes [Cell envelope biogenesis, outer membrane]

 Score = 38.6 bits (90), Expect = 0.003
 Identities = 23/77 (29%), Positives = 28/77 (36%), Gaps = 1/77 (1%)

Query: 26  PNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSPAAS 85
           P       P     P     PKP     P+  P   PKP P   PKP P   P+P P   
Sbjct: 62  PPEEQPKPPTEPETPPEPTPPKPKEKPKPEKKPKK-PKPKPKPKPKPKPKVKPQPKPKKP 120

Query: 86  PNPRPLASPMPSAKPAL 102
           P+     +P    +PA 
Sbjct: 121 PSKTAAKAPAAPNQPAR 137

Length = 244

>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional

 Score = 39.2 bits (91), Expect = 0.004
 Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 7/89 (7%)

Query: 19   SIANPNSPNASPKPSPVASPK-----PSPRASPKPSPVASPKPSPLASPKPSPVASPKPS 73
            S+A+P  P  +P+P+P A        P P A+ + SP     P+P A P   P     P+
Sbjct: 2697 SLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPA-GPATPGGPA 2755

Query: 74   PLASPKPSPAASPNPRPLASPMPSAKPAL 102
              A P P+ A  P P P A+P       L
Sbjct: 2756 RPARP-PTTAGPPAPAPPAAPAAGPPRRL 2783

Length = 3151

>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional

 Score = 38.8 bits (90), Expect = 0.004
 Identities = 24/99 (24%), Positives = 34/99 (34%), Gaps = 19/99 (19%)

Query: 21   ANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPS------- 73
            + P+  + +  P+ V +P  +   +  P+    P  S   +  P P   P PS       
Sbjct: 2797 SLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSV 2856

Query: 74   ----------PLASPKPSPAASPNP--RPLASPMPSAKP 100
                      P  SP   PAA   P  R LA P  S   
Sbjct: 2857 APGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRST 2895

Length = 3151

>gnl|CDD|236138 PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated

 Score = 38.7 bits (91), Expect = 0.004
 Identities = 16/74 (21%), Positives = 29/74 (39%), Gaps = 2/74 (2%)

Query: 31  KPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSPAASPNPRP 90
            P+        P  S  P+  A    +P A+  P    +  P P ++P+ +PA       
Sbjct: 360 HPAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPA--VPLPE 417

Query: 91  LASPMPSAKPALRA 104
             S + +A+  L+ 
Sbjct: 418 TTSQLLAARQQLQR 431

Length = 647

>gnl|CDD|165527 PHA03269, PHA03269, envelope glycoprotein C; Provisional

 Score = 38.6 bits (89), Expect = 0.004
 Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 8/82 (9%)

Query: 25  SPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKP---- 80
           +P AS K  P  +P P   AS  P P  +P+ +  A+PKP    +   +  A   P    
Sbjct: 75  TPAASEKFDP--APAPHQAASRAPDPAVAPQLA--AAPKPDAAEAFTSAAQAHEAPADAG 130

Query: 81  SPAASPNPRPLASPMPSAKPAL 102
           + AAS  P P A    S  P  
Sbjct: 131 TSAASKKPDPAAHTQHSPPPFA 152

Length = 566

>gnl|CDD|218658 pfam05616, Neisseria_TspB, Neisseria meningitidis TspB protein

 Score = 38.8 bits (90), Expect = 0.004
 Identities = 17/71 (23%), Positives = 26/71 (36%)

Query: 30  PKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSPAASPNPR 89
           P+P        +P A P P    +  P+   +P+ +P   P P P     P      + +
Sbjct: 315 PRPDLTPGSAEAPEAQPLPEVSPAENPANNPNPRENPGTRPNPEPDPDLNPDANPDTDGQ 374

Query: 90  PLASPMPSAKP 100
           P   P   A P
Sbjct: 375 PGTRPDSPAVP 385

This family consists of several Neisseria meningitidis TspB virulence factor proteins. Length = 502

>gnl|CDD|235899 PRK06975, PRK06975, bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase; Reviewed

 Score = 38.9 bits (91), Expect = 0.004
 Identities = 10/55 (18%), Positives = 17/55 (30%)

Query: 35  VASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSPAASPNPR 89
             +      A+P PS +     S   + +P+  A+    P   P   P       
Sbjct: 266 ADAAAQPATAAPAPSRMTDTNDSKSVTSQPAAAAAAPAPPPNPPATPPEPPARRG 320

Length = 656

>gnl|CDD|235899 PRK06975, PRK06975, bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase; Reviewed

 Score = 38.9 bits (91), Expect = 0.004
 Identities = 10/46 (21%), Positives = 17/46 (36%)

Query: 28  ASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPS 73
           A+P PS +     S   + +P+  A+    P   P   P    +  
Sbjct: 275 AAPAPSRMTDTNDSKSVTSQPAAAAAAPAPPPNPPATPPEPPARRG 320

Length = 656

>gnl|CDD|225689 COG3147, DedD, Uncharacterized protein conserved in bacteria [Function unknown]

 Score = 37.9 bits (88), Expect = 0.004
 Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 2/67 (2%)

Query: 27  NASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSPAASP 86
            AS  P PVA P      +P   PVA+  P P+  PK  P  +    P   P+P P A P
Sbjct: 86  AASVDPQPVAQPPVES--TPAGVPVAAQTPKPVKPPKQPPAGAVPAKPTPKPEPKPVAEP 143

Query: 87  NPRPLAS 93
              P   
Sbjct: 144 AAAPTGQ 150

Length = 226

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	368
PLN03030	324	cationic peroxidase; Provisional	100.0
cd00693	298	secretory_peroxidase Horseradish peroxidase and re	100.0
PF00141	230	peroxidase: Peroxidase; InterPro: IPR002016 Peroxi	100.0
PLN02608	289	L-ascorbate peroxidase	100.0
cd00691	253	ascorbate_peroxidase Ascorbate peroxidases and cyt	100.0
PLN02364	250	L-ascorbate peroxidase 1	100.0
PLN02879	251	L-ascorbate peroxidase	100.0
cd00692	328	ligninase Ligninase and other manganese-dependent	100.0
cd00314	255	plant_peroxidase_like Heme-dependent peroxidases s	100.0
cd00649	409	catalase_peroxidase_1 N-terminal catalytic domain	100.0
TIGR00198	716	cat_per_HPI catalase/peroxidase HPI. Note that the	100.0
PRK15061	726	catalase/hydroperoxidase HPI(I); Provisional	100.0
cd08201	264	plant_peroxidase_like_1 Uncharacterized family of	100.0
cd08200	297	catalase_peroxidase_2 C-terminal non-catalytic dom	100.0
TIGR00198	716	cat_per_HPI catalase/peroxidase HPI. Note that the	99.97
PRK15061	726	catalase/hydroperoxidase HPI(I); Provisional	99.96
COG0376	730	KatG Catalase (peroxidase I) [Inorganic ion transp	99.96
COG0376	730	KatG Catalase (peroxidase I) [Inorganic ion transp	99.19
KOG1924	1102	consensus RhoA GTPase effector DIA/Diaphanous [Sig	97.41
KOG1924	1102	consensus RhoA GTPase effector DIA/Diaphanous [Sig	97.18
PHA03247	3151	large tegument protein UL36; Provisional	95.27
PF07174	297	FAP: Fibronectin-attachment protein (FAP); InterPr	91.93
PHA03378	991	EBNA-3B; Provisional	90.5
PRK12270	1228	kgd alpha-ketoglutarate decarboxylase; Reviewed	89.48
PHA03378	991	EBNA-3B; Provisional	87.0
PRK14950	585	DNA polymerase III subunits gamma and tau; Provisi	86.3
PF07174	297	FAP: Fibronectin-attachment protein (FAP); InterPr	86.29
PRK14950	585	DNA polymerase III subunits gamma and tau; Provisi	82.49
KOG3671	569	consensus Actin regulatory protein (Wiskott-Aldric	81.95
PF01690	465	PLRV_ORF5: Potato leaf roll virus readthrough prot	81.86
PF01690	465	PLRV_ORF5: Potato leaf roll virus readthrough prot	81.35
PRK07764	824	DNA polymerase III subunits gamma and tau; Validat	80.43

>PLN03030 cationic peroxidase; Provisional

Probab=100.00  E-value=4.3e-87  Score=647.55  Aligned_cols=263  Identities=38%  Similarity=0.668  Sum_probs=248.6

Q ss_pred             CcccccccccccCchHHHHHHHHHhhhhccCCccchhhhhhhhhcccccCCCceeeeccCCCCcccccccccCCCCcchh
Q 039585           99 KPALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFNVAERDSDINLSLPGDAF  178 (368)
Q Consensus        99 ~~~L~~~fY~~sCp~~e~iV~~~v~~~~~~~~~~a~~llRl~FHDc~v~GcDgSill~~~~~~~~E~~~~~N~~l~~~~~  178 (368)
                      ..+|+++||+++||++|+||++.|++.+.+++++++++|||+||||||+||||||||+++.   .||++.+|.+|  |||
T Consensus        22 ~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~~---~Ek~a~~N~~l--~Gf   96 (324)
T PLN03030         22 GQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGSN---TEKTALPNLLL--RGY   96 (324)
T ss_pred             hccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCCc---ccccCCCCcCc--chH
Confidence            3569999999999999999999999999999999999999999999999999999998643   69999999999  999


Q ss_pred             HHHHHHHHHHHhhCCCCCcHHHHHHhhhhhHHHhcCCCCcccccCCcCCccccccCCCCCCCCCCCCHHHHHHHHHHCCC
Q 039585          179 DVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGF  258 (368)
Q Consensus       179 ~~i~~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl  258 (368)
                      ++|+.||++||++||++|||||||+|||||||+++|||.|.|++||||+++|...++. +||.++.++++|++.|+++||
T Consensus        97 ~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~-~LP~p~~~~~~l~~~F~~~Gl  175 (324)
T PLN03030         97 DVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDAS-NLPGFTDSIDVQKQKFAAKGL  175 (324)
T ss_pred             HHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCccccc-CCcCCCCCHHHHHHHHHHcCC
Confidence            9999999999999999999999999999999999999999999999999999877774 899999999999999999999


Q ss_pred             ChhhhhhhcccceeccccccccccccccCCCCC-CCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCCCCccchhhhhh
Q 039585          259 SIQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQ-PTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRG  337 (368)
Q Consensus       259 ~~~dlVaLsGaHtiG~~hc~~f~~Rl~~~~g~~-~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~  337 (368)
                      +.+|||+||||||||++||.+|.+|||||.|++ ..||+||+.|+..||+.||..+ +....+.||..||.+|||+||+|
T Consensus       176 ~~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~-~~~~~~~lD~~Tp~~FDn~Yy~n  254 (324)
T PLN03030        176 NTQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNG-DGSRRIALDTGSSNRFDASFFSN  254 (324)
T ss_pred             CHHHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCC-CCCccccCCCCCCcccccHHHHH
Confidence            999999999999999999999999999999875 5899999999999999999533 33346789999999999999999


Q ss_pred             ccccccccccchhcccCCChHHHHHHhhhCC
Q 039585          338 LPRGLGLLRVDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       338 ll~~~glL~SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                      |++++|||+|||+|++|++|+.+|++||.|+
T Consensus       255 ll~~rGlL~SDq~L~~d~~T~~~V~~~A~~~  285 (324)
T PLN03030        255 LKNGRGILESDQKLWTDASTRTFVQRFLGVR  285 (324)
T ss_pred             HHhcCCCcCCchHhhcCccHHHHHHHHhccc
Confidence            9999999999999999999999999999863

>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases

Probab=100.00  E-value=5.8e-84  Score=624.46  Aligned_cols=264  Identities=48%  Similarity=0.846  Sum_probs=253.6

Q ss_pred             ccccccccccCchHHHHHHHHHhhhhccCCccchhhhhhhhhcccccCCCceeeeccCCCCcccccccccCCCCcchhHH
Q 039585          101 ALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFNVAERDSDINLSLPGDAFDV  180 (368)
Q Consensus       101 ~L~~~fY~~sCp~~e~iV~~~v~~~~~~~~~~a~~llRl~FHDc~v~GcDgSill~~~~~~~~E~~~~~N~~l~~~~~~~  180 (368)
                      +|+++||+++||++|+||++.|++.+.++++++++||||+||||||+||||||||+++.++..|+++++|.+|  +||++
T Consensus         1 ~L~~~~Y~~sCP~~e~iV~~~v~~~~~~~~~~a~~~lRl~FHDc~v~GcDaSill~~~~~~~~E~~~~~N~~l--~g~~~   78 (298)
T cd00693           1 QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTANNTSEKDAPPNLSL--RGFDV   78 (298)
T ss_pred             CCCcccccCCCCChHHHHHHHHHHHHHhCCCcCchhhhhhhHhhhccCcceeEEecCCCCCchhccCCCCCCc--chhHH
Confidence            5899999999999999999999999999999999999999999999999999999988667789999999999  99999


Q ss_pred             HHHHHHHHHhhCCCCCcHHHHHHhhhhhHHHhcCCCCcccccCCcCCccccccCCCCCCCCCCCCHHHHHHHHHHCCCCh
Q 039585          181 VIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSI  260 (368)
Q Consensus       181 i~~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~  260 (368)
                      |+.||++||+.||++|||||||+||||+||+++|||.|.|++||+|++++....+ ++||.++.+++++++.|+++||+.
T Consensus        79 i~~iK~~~e~~cp~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~G~~~  157 (298)
T cd00693          79 IDDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPLGRRDGRVSSANDV-GNLPSPFFSVSQLISLFASKGLTV  157 (298)
T ss_pred             HHHHHHHHHhhCCCcccHHHHHHHhhhhceeccCCCcccccCCCcCCcccCcccc-cCCCCcccCHHHHHHHHHHcCCCH
Confidence            9999999999999999999999999999999999999999999999998877665 789999999999999999999999


Q ss_pred             hhhhhhcccceeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCCCCccchhhhhhccc
Q 039585          261 QEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLPR  340 (368)
Q Consensus       261 ~dlVaLsGaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~ll~  340 (368)
                      +|||+|+||||||++||.+|.+|||||+|++++||+||+.|+..|++.||+.+ +++..++||..||.+|||+||+||+.
T Consensus       158 ~d~VaL~GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~-~~~~~~~lD~~Tp~~FDn~Yy~~l~~  236 (298)
T cd00693         158 TDLVALSGAHTIGRAHCSSFSDRLYNFSGTGDPDPTLDPAYAAQLRKKCPAGG-DDDTLVPLDPGTPNTFDNSYYKNLLA  236 (298)
T ss_pred             HHheeecccceeeeeecccccccccCCCCCCCCCCCccHHHHHHhcCCCCCCC-CCCccccCCCCCCCccccHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999754 45667899999999999999999999


Q ss_pred             cccccccchhcccCCChHHHHHHhhhCC
Q 039585          341 GLGLLRVDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       341 ~~glL~SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                      ++|||+|||+|+.|++|+.+|++||+||
T Consensus       237 ~~glL~SD~~L~~d~~t~~~V~~~A~d~  264 (298)
T cd00693         237 GRGLLTSDQALLSDPRTRAIVNRYAANQ  264 (298)
T ss_pred             cccCccCCHHhccCccHHHHHHHHhhCH
Confidence            9999999999999999999999999885

Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites.

>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions

Probab=100.00  E-value=4.8e-71  Score=517.80  Aligned_cols=229  Identities=49%  Similarity=0.862  Sum_probs=208.9

Q ss_pred             HHHHHhhhhccCCccchhhhhhhhhcccc-cCCCceeeeccCCCCcccccccccCCCCcchhHHHHHHHHHHHhhCCCCC
Q 039585          118 VREFVHQKQTQSPSTAAGALRVFMHDCFV-DGCDGSVLISSNAFNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVV  196 (368)
Q Consensus       118 V~~~v~~~~~~~~~~a~~llRl~FHDc~v-~GcDgSill~~~~~~~~E~~~~~N~~l~~~~~~~i~~iK~~le~~cp~~V  196 (368)
                      |++.|++.+..+++++++||||+|||||+ +|||||||+.     ..|+++++|.|| .+++++|+.||+++|++||++|
T Consensus         1 Vr~~v~~~~~~~~~~~~~~lRl~FHDc~~~~GcDgSil~~-----~~e~~~~~N~gl-~~~~~~i~~ik~~~~~~cp~~V   74 (230)
T PF00141_consen    1 VRSDVRAAFKKDPTLAPGLLRLAFHDCFVYGGCDGSILLF-----SAEKDAPPNRGL-RDGFDVIDPIKAKLEAACPGVV   74 (230)
T ss_dssp             HHHHHHHHHHHHTTSHHHHHHHHHHHHTTHTSSSSGGGGS-----TTGGGSGGGTTH-HHHHHHHHHHHHHHCHHSTTTS
T ss_pred             CHHHHHHHHHHCcCccHHHHHHHccccccccccccceecc-----ccccccccccCc-ceeeechhhHHhhhcccccCCC
Confidence            78899999999999999999999999999 9999999983     479999999999 2399999999999999999999


Q ss_pred             cHHHHHHhhhhhHHHhcCCCCcccccCCcCCccccccCCCCCCCCCCCCHHHHHHHHHHCCCChhhhhhhcccceecccc
Q 039585          197 SCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAH  276 (368)
Q Consensus       197 ScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsGaHtiG~~h  276 (368)
                      ||||||+||||+||+.+|||.|.|++||+|++++...++ .+||.++.++++|++.|+++||+.+|||||+||||||++|
T Consensus        75 S~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~Gls~~e~VaLsGaHTiG~~~  153 (230)
T PF00141_consen   75 SCADIIALAARDAVELCGGPRIPVPLGRRDGTVSSPSGA-SNLPSPTDSVDQLLAFFARKGLSAEEMVALSGAHTIGRAH  153 (230)
T ss_dssp             -HHHHHHHHHHHHHHHTTGGHSHBEB-EBB-SSGGHHHH-HHSSTTTSHHHHHHHHHHHTT--HHHHHHHHGGGGSTEES
T ss_pred             CHHHHHHHHhhhccccccccccccccccccccccccccc-ccccccccccchhhhhhhccccchhhhcceecccccccce
Confidence            999999999999999999999999999999999988766 6799999999999999999999999999999999999999


Q ss_pred             ccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCCCCccchhhhhhccccccccccchhcccCCC
Q 039585          277 CKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLPRGLGLLRVDNMLVKDPR  356 (368)
Q Consensus       277 c~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~ll~~~glL~SD~~L~~d~~  356 (368)
                      |.+|. ||| +    ..||+||+.|+..   .| ..+  .++.+++|  ||.+|||+||++|+.++|+|+||++|++|++
T Consensus       154 c~~f~-rl~-~----~~dp~~d~~~~~~---~C-~~~--~~~~~~~d--tp~~fDN~Yy~~ll~~~gll~SD~~L~~d~~  219 (230)
T PF00141_consen  154 CSSFS-RLY-F----PPDPTMDPGYAGQ---NC-NSG--GDNGVPLD--TPTVFDNSYYKNLLNGRGLLPSDQALLNDPE  219 (230)
T ss_dssp             GGCTG-GTS-C----SSGTTSTHHHHHH---SS-STS--GCTCEESS--STTS-SSHHHHHHHHTEEEEHHHHHHHHSTT
T ss_pred             ecccc-ccc-c----cccccccccccee---cc-CCC--cccccccc--CCCcchhHHHHHHhcCCCcCHHHHHHhcCHH
Confidence            99999 999 5    5799999999988   99 433  33377888  9999999999999999999999999999999


Q ss_pred             hHHHHHHhhhC
Q 039585          357 TKPLVDQYASN  367 (368)
Q Consensus       357 t~~~V~~yA~d  367 (368)
                      |+.+|++||+|
T Consensus       220 t~~~V~~yA~d  230 (230)
T PF00141_consen  220 TRPIVERYAQD  230 (230)
T ss_dssp             HHHHHHHHHHT
T ss_pred             HHHHHHHHhcC
Confidence            99999999987

Most haem peroxidases follow the reaction scheme: Fe3+ + H2O2 --> [Fe4+=O]R' (Compound I) + H2O [Fe4+=O]R' + substrate --> [Fe4+=O]R (Compound II) + oxidised substrate [Fe4+=O]R + substrate --> Fe3+ + H2O + oxidised substrate In this mechanism, the enzyme reacts with one equivalent of H2O2 to give [Fe4+=O]R' (compound I). This is a two-electron oxidation/reduction reaction where H2O2 is reduced to water and the enzyme is oxidised. One oxidising equivalent resides on iron, giving the oxyferryl [] intermediate, while in many peroxidases the porphyrin (R) is oxidised to the porphyrin pi-cation radical (R'). Compound I then oxidises an organic substrate to give a substrate radical []. Haem peroxidases include two superfamilies: one found in bacteria, fungi, plants and the second found in animals. The first one can be viewed as consisting of 3 major classes []. Class I, the intracellular peroxidases, includes: yeast cytochrome c peroxidase (CCP), a soluble protein found in the mitochondrial electron transport chain, where it probably protects against toxic peroxides; ascorbate peroxidase (AP), the main enzyme responsible for hydrogen peroxide removal in chloroplasts and cytosol of higher plants; and bacterial catalase- peroxidases, exhibiting both peroxidase and catalase activities. It is thought that catalase-peroxidase provides protection to cells under oxidative stress []. Class II consists of secretory fungal peroxidases: ligninases, or lignin peroxidases (LiPs), and manganese-dependent peroxidases (MnPs). These are monomeric glycoproteins involved in the degradation of lignin. In MnP, Mn2+ serves as the reducing substrate []. Class II proteins contain four conserved disulphide bridges and two conserved calcium-binding sites. Class III consists of the secretory plant peroxidases, which have multiple tissue-specific functions: e.g., removal of hydrogen peroxide from chloroplasts and cytosol; oxidation of toxic compounds; biosynthesis of the cell wall; defence responses towards wounding; indole-3-acetic acid (IAA) catabolism; ethylene biosynthesis; and so on. Class III proteins are also monomeric glycoproteins, containing four conserved disulphide bridges and two calcium ions, although the placement of the disulphides differs from class II enzymes. The crystal structures of a number of these proteins show that they share the same architecture - two all-alpha domains between which the haem group is embedded. ; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1QPA_B 2DV2_A 2B2R_B 1MWV_B 2FXJ_A 2FXG_A 2B2O_B 1X7U_B 2B2Q_A 2FXH_A ....

>PLN02608 L-ascorbate peroxidase

Probab=100.00  E-value=1.9e-58  Score=441.80  Aligned_cols=199  Identities=33%  Similarity=0.434  Sum_probs=178.7

Q ss_pred             HHHHHHhhhhccCCccchhhhhhhhhccc-------ccCCCceeeeccCCCCcccccccccCCCCcchhHHHHHHHHHHH
Q 039585          117 IVREFVHQKQTQSPSTAAGALRVFMHDCF-------VDGCDGSVLISSNAFNVAERDSDINLSLPGDAFDVVIKIKNALE  189 (368)
Q Consensus       117 iV~~~v~~~~~~~~~~a~~llRl~FHDc~-------v~GcDgSill~~~~~~~~E~~~~~N~~l~~~~~~~i~~iK~~le  189 (368)
                      .+++++++ +.+++.+++.||||+|||||       ++||||||++.      .|+++++|.|| .+||++|+.||+++ 
T Consensus        16 ~~~~~~~~-~~~d~~~a~~llRLaFHDc~t~d~~~~~gGcDgSIll~------~E~~~~~N~gL-~~g~~vid~iK~~~-   86 (289)
T PLN02608         16 KARRDLRA-LIASKNCAPIMLRLAWHDAGTYDAKTKTGGPNGSIRNE------EEYSHGANNGL-KIAIDLCEPVKAKH-   86 (289)
T ss_pred             HHHHHHHH-HHHCCCcHHHHHHHhhhhcCCcCCCCCCCCCCeeeecc------cccCCccccch-HHHHHHHHHHHHHc-
Confidence            45566644 66789999999999999999       89999999984      69999999999 46999999999987 


Q ss_pred             hhCCCCCcHHHHHHhhhhhHHHhcCCCCcccccCCcCCccccccCCCCCCCCCCCCHHHHHHHHHHCCCChhhhhhhccc
Q 039585          190 DACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGA  269 (368)
Q Consensus       190 ~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsGa  269 (368)
                          ++|||||||+||||+||+++|||.|+|++||+|++++.   ++++||.++.+++++++.|+++||+.+|||+|+||
T Consensus        87 ----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~---~~~~LP~p~~~~~~l~~~F~~~Gl~~~D~VaLsGA  159 (289)
T PLN02608         87 ----PKITYADLYQLAGVVAVEVTGGPTIDFVPGRKDSNACP---EEGRLPDAKKGAKHLRDVFYRMGLSDKDIVALSGG  159 (289)
T ss_pred             ----CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCcCC---ccCCCcCCCCCHHHHHHHHHHcCCCHHHHhhhccc
Confidence                48999999999999999999999999999999999885   45689999999999999999999999999999999


Q ss_pred             ceeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCCCCccchhhhhhcccc--ccc--c
Q 039585          270 HTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLPRG--LGL--L  345 (368)
Q Consensus       270 HtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~ll~~--~gl--L  345 (368)
                      ||||++||.    |+ +|.|.                               . ..||.+|||+||+||+.+  +|+  |
T Consensus       160 HTiG~ahc~----r~-g~~g~-------------------------------~-~~Tp~~FDN~Yy~~ll~~~~~gll~L  202 (289)
T PLN02608        160 HTLGRAHPE----RS-GFDGP-------------------------------W-TKEPLKFDNSYFVELLKGESEGLLKL  202 (289)
T ss_pred             ccccccccc----CC-CCCCC-------------------------------C-CCCCCccChHHHHHHHcCCcCCcccc
Confidence            999999994    65 44320                               0 158999999999999998  788  7


Q ss_pred             ccchhcccCCChHHHHHHhhhCC
Q 039585          346 RVDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       346 ~SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                      +|||+|+.|++|+.+|++||.||
T Consensus       203 ~SD~~L~~d~~T~~~V~~fA~~~  225 (289)
T PLN02608        203 PTDKALLEDPEFRPYVELYAKDE  225 (289)
T ss_pred             ccCHhhhcChhHHHHHHHHhhCH
Confidence            99999999999999999999885

>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases

Probab=100.00  E-value=3e-58  Score=435.95  Aligned_cols=209  Identities=28%  Similarity=0.342  Sum_probs=186.7

Q ss_pred             HHHHHHHHHhhhhccCCccchhhhhhhhhcccccCCCceeeeccC---CCCcccccccccCCCCcchhHHHHHHHHHHHh
Q 039585          114 FEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSN---AFNVAERDSDINLSLPGDAFDVVIKIKNALED  190 (368)
Q Consensus       114 ~e~iV~~~v~~~~~~~~~~a~~llRl~FHDc~v~GcDgSill~~~---~~~~~E~~~~~N~~l~~~~~~~i~~iK~~le~  190 (368)
                      .+.+|++.|++.+. +++++++||||+|||||+  ||+|+++++.   ..+.+|+++++|.+| .++|++|+.||+++  
T Consensus        12 ~~~~V~~~v~~~~~-~~~~~~~llRl~FHDc~~--~d~s~~~~G~d~s~~~~~E~~~~~N~~L-~~~~~~i~~iK~~~--   85 (253)
T cd00691          12 DLEAARNDIAKLID-DKNCAPILVRLAWHDSGT--YDKETKTGGSNGTIRFDPELNHGANAGL-DIARKLLEPIKKKY--   85 (253)
T ss_pred             HHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHhc--cccccCCCCCCccccchhhcCCccccch-HHHHHHHHHHHHHc--
Confidence            57899999999999 999999999999999994  7777666432   123479999999999 58999999999986  


Q ss_pred             hCCCCCcHHHHHHhhhhhHHHhcCCCCcccccCCcCCccccccCCCCCCCCCCCCHHHHHHHHHHCCCChhhhhhhcccc
Q 039585          191 ACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAH  270 (368)
Q Consensus       191 ~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsGaH  270 (368)
                        + +|||||||+||||+||+++|||.|.|++||+|++++....++++||.++.++++|+++|+++||+.+|||+|+|||
T Consensus        86 --~-~VScADilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~d~VaLsGaH  162 (253)
T cd00691          86 --P-DISYADLWQLAGVVAIEEMGGPKIPFRPGRVDASDPEECPPEGRLPDASKGADHLRDVFYRMGFNDQEIVALSGAH  162 (253)
T ss_pred             --C-CCCHHHHHHHHHHHHHHHcCCCccCcccCCCCCCcccccCcccCCCCCCCCHHHHHHHHHhcCCCHHHHHHhcccc
Confidence              3 7999999999999999999999999999999999998777788999999999999999999999999999999999


Q ss_pred             eeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCCCCccchhhhhhcccccc-------
Q 039585          271 TIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLPRGLG-------  343 (368)
Q Consensus       271 tiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~ll~~~g-------  343 (368)
                      |||++||..     ++|.|.                                |..||.+|||+||+||+.++|       
T Consensus       163 TiG~a~c~~-----~~~~g~--------------------------------~~~tp~~FDn~Yy~~ll~~~g~~~~~~~  205 (253)
T cd00691         163 TLGRCHKER-----SGYDGP--------------------------------WTKNPLKFDNSYFKELLEEDWKLPTPGL  205 (253)
T ss_pred             eeecccccC-----CCCCCC--------------------------------CCCCCCcccHHHHHHHhcCCCccCcCcc
Confidence            999999943     244321                                015899999999999999999       


Q ss_pred             -ccccchhcccCCChHHHHHHhhhCC
Q 039585          344 -LLRVDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       344 -lL~SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                       +|+||++|+.|++|+.+|++||+|+
T Consensus       206 ~~L~sD~~L~~d~~t~~~v~~~a~~~  231 (253)
T cd00691         206 LMLPTDKALLEDPKFRPYVELYAKDQ  231 (253)
T ss_pred             eechhhHHHHcCccHHHHHHHHhhCH
Confidence             9999999999999999999999874

Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water.

>PLN02364 L-ascorbate peroxidase 1

Probab=100.00  E-value=1.2e-57  Score=430.41  Aligned_cols=213  Identities=31%  Similarity=0.436  Sum_probs=188.8

Q ss_pred             ccccccc--cCchHHHHHHHHHhhhhccCCccchhhhhhhhh-----ccccc--CCCceeeeccCCCCcccccccccCCC
Q 039585          103 RADYYKT--TCPDFEKIVREFVHQKQTQSPSTAAGALRVFMH-----DCFVD--GCDGSVLISSNAFNVAERDSDINLSL  173 (368)
Q Consensus       103 ~~~fY~~--sCp~~e~iV~~~v~~~~~~~~~~a~~llRl~FH-----Dc~v~--GcDgSill~~~~~~~~E~~~~~N~~l  173 (368)
                      ..+||..  .|+.++..+++.+++.+ .++++++.||||+||     ||+++  ||||||.+      ..|+++.+|.||
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~lRl~FHd~~t~dc~~~~GG~dgSi~~------~~E~~~~~N~gl   74 (250)
T PLN02364          2 TKNYPTVSEDYKKAVEKCRRKLRGLI-AEKNCAPIMVRLAWHSAGTFDCQSRTGGPFGTMRF------DAEQAHGANSGI   74 (250)
T ss_pred             CCCCCCccHHHHHHHHHHHHHHHHHH-hCCCcHHHHHHHHHccccCcCcCCCCCCCCccccc------cccccCCCccCH
Confidence            3456664  48889999999999987 778999999999999     88876  99999965      369999999998


Q ss_pred             CcchhHHHHHHHHHHHhhCCCCCcHHHHHHhhhhhHHHhcCCCCcccccCCcCCccccccCCCCCCCCCCCCHHHHHHHH
Q 039585          174 PGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMF  253 (368)
Q Consensus       174 ~~~~~~~i~~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F  253 (368)
                       .+||++|+.||+++     ++|||||||+||||+||+++|||.|.|++||+|++++..   +++||.++.++++|++.|
T Consensus        75 -~~~~~~i~~ik~~~-----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~---~~~lP~p~~~~~~l~~~F  145 (250)
T PLN02364         75 -HIALRLLDPIREQF-----PTISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQPPP---EGRLPDATKGCDHLRDVF  145 (250)
T ss_pred             -HHHHHHHHHHHHHc-----CCcCHHHHHHHHHHHHHHhcCCCeeCCCCCCCCcccccc---cCCCCCCCcCHHHHHHHH
Confidence             57999999999998     589999999999999999999999999999999998753   568999999999999999


Q ss_pred             HH-CCCChhhhhhhcccceeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCCCCccch
Q 039585          254 AS-KGFSIQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDN  332 (368)
Q Consensus       254 ~~-~Gl~~~dlVaLsGaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN  332 (368)
                      ++ +||+.+|||||+||||||++||    .|+ +|.|.                               + ..||.+|||
T Consensus       146 ~~~~Gl~~~d~VaLsGaHTiG~~hc----~r~-~~~g~-------------------------------~-~~tp~~fDn  188 (250)
T PLN02364        146 AKQMGLSDKDIVALSGAHTLGRCHK----DRS-GFEGA-------------------------------W-TSNPLIFDN  188 (250)
T ss_pred             HHhcCCCHHHheeeecceeeccccC----CCC-CCCCC-------------------------------C-CCCCCccch
Confidence            97 5999999999999999999999    454 44321                               1 158999999


Q ss_pred             hhhhhcccc--ccccc--cchhcccCCChHHHHHHhhhCC
Q 039585          333 SYFRGLPRG--LGLLR--VDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       333 ~Yy~~ll~~--~glL~--SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                      +||+||+.+  +|+|.  |||+|+.|++|+.+|++||.||
T Consensus       189 ~Yy~~ll~~~~~gll~l~sD~~L~~d~~T~~~v~~~a~~~  228 (250)
T PLN02364        189 SYFKELLSGEKEGLLQLVSDKALLDDPVFRPLVEKYAADE  228 (250)
T ss_pred             HHHHHHhcCCcCCCccccchHHHccCchHHHHHHHHhhCH
Confidence            999999999  89876  9999999999999999999874

>PLN02879 L-ascorbate peroxidase

Probab=100.00  E-value=4.4e-56  Score=419.09  Aligned_cols=200  Identities=30%  Similarity=0.408  Sum_probs=177.7

Q ss_pred             HHHHHHHhhhhccCCccchhhhhhhhhcccc-------cCCCceeeeccCCCCcccccccccCCCCcchhHHHHHHHHHH
Q 039585          116 KIVREFVHQKQTQSPSTAAGALRVFMHDCFV-------DGCDGSVLISSNAFNVAERDSDINLSLPGDAFDVVIKIKNAL  188 (368)
Q Consensus       116 ~iV~~~v~~~~~~~~~~a~~llRl~FHDc~v-------~GcDgSill~~~~~~~~E~~~~~N~~l~~~~~~~i~~iK~~l  188 (368)
                      .-++..+.+.+ .+..+++.+|||+||||++       |||||||++.      .|+++++|.|| ..++++|+.||+++
T Consensus        18 ~~~~~~~~~~~-~~~~~~p~~vRla~Hdagt~~~~~~~GG~~Gsirf~------~E~~~~~N~gL-~~~~~~i~~iK~~~   89 (251)
T PLN02879         18 QRCKRKLRGLI-AEKHCAPIVLRLAWHSAGTFDVKTKTGGPFGTIRHP------QELAHDANNGL-DIAVRLLDPIKELF   89 (251)
T ss_pred             HHHHHHHHHHH-hCCCchhHhHHHHHhhhccccCCCCCCCCCeeecCh------hhccCCCcCCh-HHHHHHHHHHHHHc
Confidence            34567777766 4569999999999999964       8999999873      69999999999 34999999999998


Q ss_pred             HhhCCCCCcHHHHHHhhhhhHHHhcCCCCcccccCCcCCccccccCCCCCCCCCCCCHHHHHHHHHHCCCChhhhhhhcc
Q 039585          189 EDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMG  268 (368)
Q Consensus       189 e~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsG  268 (368)
                           ++|||||||+||||+||+++|||.|+|++||+|++++.   ++++||.++.++++|++.|+++||+.+|||||+|
T Consensus        90 -----~~VScADilalAa~~AV~~~GGP~~~~~~GR~D~~~~~---~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVALsG  161 (251)
T PLN02879         90 -----PILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPP---PEGRLPQATKGVDHLRDVFGRMGLNDKDIVALSG  161 (251)
T ss_pred             -----CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCCCC---cccCCCCCCCCHHHHHHHHHHcCCCHHHHeeeec
Confidence                 57999999999999999999999999999999999874   4578999999999999999999999999999999


Q ss_pred             cceeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCCCCccchhhhhhcccc--ccc--
Q 039585          269 AHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLPRG--LGL--  344 (368)
Q Consensus       269 aHtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~ll~~--~gl--  344 (368)
                      |||||++||.    | ++|.|.                               +| .||.+|||+||++|+.+  +|+  
T Consensus       162 aHTiG~ah~~----r-~g~~g~-------------------------------~d-~tp~~FDN~Yy~~ll~~~~~gll~  204 (251)
T PLN02879        162 GHTLGRCHKE----R-SGFEGA-------------------------------WT-PNPLIFDNSYFKEILSGEKEGLLQ  204 (251)
T ss_pred             cccccccccc----c-ccCCCC-------------------------------CC-CCccceeHHHHHHHHcCCcCCCcc
Confidence            9999999994    4 344331                               22 58999999999999999  888  


Q ss_pred             cccchhcccCCChHHHHHHhhhCC
Q 039585          345 LRVDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       345 L~SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                      |+||++|+.|++|+.+|++||+||
T Consensus       205 L~SD~aL~~D~~t~~~V~~~A~d~  228 (251)
T PLN02879        205 LPTDKALLDDPLFLPFVEKYAADE  228 (251)
T ss_pred             chhhHHHhcCCcHHHHHHHHhhCH
Confidence            679999999999999999999985

>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases

Probab=100.00  E-value=5.7e-56  Score=431.85  Aligned_cols=207  Identities=29%  Similarity=0.438  Sum_probs=184.2

Q ss_pred             cCchHHHHHHHHHhhhhccC---Cccchhhhhhhhhcccc------------cCCCceeeeccCCCCcccccccccCCCC
Q 039585          110 TCPDFEKIVREFVHQKQTQS---PSTAAGALRVFMHDCFV------------DGCDGSVLISSNAFNVAERDSDINLSLP  174 (368)
Q Consensus       110 sCp~~e~iV~~~v~~~~~~~---~~~a~~llRl~FHDc~v------------~GcDgSill~~~~~~~~E~~~~~N~~l~  174 (368)
                      .|  +|..|+++|++.|..+   ...|+.+|||+||||++            +||||||||+.+    .|+++++|.|| 
T Consensus        14 cc--~~~~v~~dl~~~~~~~~~c~~~a~~~lRL~FHD~~~~~~~~~~~~~~~gGcDgSill~~~----~E~~~~~N~gL-   86 (328)
T cd00692          14 CC--VWFDILDDIQGNLFNGGECGEEAHESLRLTFHDAIGFSPALAAGQFGGGGADGSIVLFDD----IETAFHANIGL-   86 (328)
T ss_pred             hc--chHHHHHHHHHHHhcCCCCchHHHHhHHHhhhcccccccccccCCCCCCCcCceeecCCc----ccccCCCCCCH-
Confidence            56  6899999999999754   45567799999999996            899999999743    69999999999 


Q ss_pred             cchhHHHHHHHHHHHhhCCCCCcHHHHHHhhhhhHHH-hcCCCCcccccCCcCCccccccCCCCCCCCCCCCHHHHHHHH
Q 039585          175 GDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVV-MAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMF  253 (368)
Q Consensus       175 ~~~~~~i~~iK~~le~~cp~~VScADilalAa~~av~-~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F  253 (368)
                       +  ++|+.||..+|+.|   |||||||+||||+||+ +.|||+|.|++||+|++++.   ++++||.++.++++|++.|
T Consensus        87 -~--~vvd~lk~~~e~~c---VScADiialAa~~AV~~~~GGP~i~v~~GR~D~~~s~---~~g~LP~p~~sv~~l~~~F  157 (328)
T cd00692          87 -D--EIVEALRPFHQKHN---VSMADFIQFAGAVAVSNCPGAPRLEFYAGRKDATQPA---PDGLVPEPFDSVDKILARF  157 (328)
T ss_pred             -H--HHHHHHHHHHHhcC---cCHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCCCC---cccCCCCCCCCHHHHHHHH
Confidence             4  99999999999998   9999999999999999 56999999999999999875   4568999999999999999


Q ss_pred             HHCCCChhhhhhhcccceeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCCCCccchh
Q 039585          254 ASKGFSIQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNS  333 (368)
Q Consensus       254 ~~~Gl~~~dlVaLsGaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~  333 (368)
                      +++||+.+|||+|+||||||++|.               .||+++              +      +++| .||.+|||+
T Consensus       158 ~~~Gf~~~E~VaLsGAHTiG~a~~---------------~Dps~~--------------g------~p~D-~TP~~FDn~  201 (328)
T cd00692         158 ADAGFSPDELVALLAAHSVAAQDF---------------VDPSIA--------------G------TPFD-STPGVFDTQ  201 (328)
T ss_pred             HHcCCCHHHHhhhcccccccccCC---------------CCCCCC--------------C------CCCC-CCcchhcHH
Confidence            999999999999999999999982               356653              1      3577 599999999


Q ss_pred             hhhhcc-cccc-------------------ccccchhcccCCChHHHHHHhhhCC
Q 039585          334 YFRGLP-RGLG-------------------LLRVDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       334 Yy~~ll-~~~g-------------------lL~SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                      ||+|++ .+++                   +|+||++|+.|++|+.+|++||+||
T Consensus       202 Yf~~ll~~~~~~~g~~~~~~e~~~~~~g~~~L~SD~~L~~D~~T~~~v~~fa~dq  256 (328)
T cd00692         202 FFIETLLKGTAFPGSGGNQGEVESPLPGEFRLQSDFLLARDPRTACEWQSFVNNQ  256 (328)
T ss_pred             HHHHHHHcCCCCCCccccccccccCccccccccchHHHhcCCcHHHHHHHHhcCH
Confidence            999987 5555                   5999999999999999999999985

Ligninases and related extracellular fungal peroxidases belong to class II of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class II peroxidases are fungal glycoproteins that have been implicated in the oxidative breakdown of lignin, the main cell wall component of woody plants. They contain four conserved disulphide bridges and two conserved calcium binding sites.

>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases

Probab=100.00  E-value=4.3e-53  Score=402.10  Aligned_cols=208  Identities=32%  Similarity=0.424  Sum_probs=189.3

Q ss_pred             HHHHHHhhhhccCCccchhhhhhhhhccccc--------CCCceeeeccCCCCcccccccccCCCCcchhHHHHHHHHHH
Q 039585          117 IVREFVHQKQTQSPSTAAGALRVFMHDCFVD--------GCDGSVLISSNAFNVAERDSDINLSLPGDAFDVVIKIKNAL  188 (368)
Q Consensus       117 iV~~~v~~~~~~~~~~a~~llRl~FHDc~v~--------GcDgSill~~~~~~~~E~~~~~N~~l~~~~~~~i~~iK~~l  188 (368)
                      .|++.|++.+.++..+++++|||+|||||+.        ||||||+++      .|+++++|.+| .+++++|+.||+++
T Consensus         2 ~v~~~l~~~~~~~~~~~~~llRl~fHD~~~~~~~~~~~gg~dgsi~~~------~e~~~~~N~~l-~~~~~~l~~ik~~~   74 (255)
T cd00314           2 AIKAILEDLITQAGALAGSLLRLAFHDAGTYDIADGKGGGADGSIRFE------PELDRPENGGL-DKALRALEPIKSAY   74 (255)
T ss_pred             hHHHHHHHHHHhCcchHHHHHHHHHHHhccccccCCCCCCCCceEecc------ccccCcccccH-HHHHHHHHHHHHHc
Confidence            4778888888889999999999999999996        999999996      49999999997 58999999999999


Q ss_pred             HhhCCCCCcHHHHHHhhhhhHHHhc--CCCCcccccCCcCCcccc--ccCCCCCCCCCCCCHHHHHHHHHHCCCChhhhh
Q 039585          189 EDACPGVVSCADILTASTRNLVVMA--GGPRFNVSFGRKDGLVSQ--AARIPGNLPTNNMTMDEILKMFASKGFSIQEYV  264 (368)
Q Consensus       189 e~~cp~~VScADilalAa~~av~~~--GGP~~~v~~GR~D~~~s~--~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlV  264 (368)
                      |.  +++|||||||+|||++||+.+  |||.|.|++||+|++.+.  ...+.+++|.+..+++++++.|+++||+.+|||
T Consensus        75 ~~--~~~vS~ADlialAa~~Av~~~~~ggp~~~~~~GR~D~~~~~~~~p~P~~~~p~~~~~~~~~~~~F~~~Gl~~~e~V  152 (255)
T cd00314          75 DG--GNPVSRADLIALAGAVAVESTFGGGPLIPFRFGRLDATEPDLGVPDPEGLLPNETSSATELRDKFKRMGLSPSELV  152 (255)
T ss_pred             CC--CCcccHHHHHHHHHHHHHHHhccCCCeeeeCCCCCCCchhhccCCCCCCCCCCccchHHHHHHHHHHcCCCHHHHH
Confidence            88  889999999999999999999  999999999999999774  344566788888899999999999999999999


Q ss_pred             hhc-cccee-ccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCCCCccchhhhhhccccc
Q 039585          265 ALM-GAHTI-GFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLPRGL  342 (368)
Q Consensus       265 aLs-GaHti-G~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~ll~~~  342 (368)
                      ||+ ||||| |++||..|..|+                        |.           +|..||.+|||+||++|+.++
T Consensus       153 AL~~GaHti~G~~~~~~~~~~~------------------------~~-----------~~~~tp~~fDN~yy~~l~~~~  197 (255)
T cd00314         153 ALSAGAHTLGGKNHGDLLNYEG------------------------SG-----------LWTSTPFTFDNAYFKNLLDMN  197 (255)
T ss_pred             hhccCCeeccCcccCCCCCccc------------------------CC-----------CCCCCCCccchHHHHHHhcCC
Confidence            999 99999 999998887664                        21           234799999999999999998


Q ss_pred             ----------------cccccchhcccCCChHHHHHHhhhCC
Q 039585          343 ----------------GLLRVDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       343 ----------------glL~SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                                      ++|+||++|+.|++|+.+|++||+|+
T Consensus       198 ~~~~~~~~~~~~~~~~~~l~sD~~L~~d~~t~~~v~~ya~~~  239 (255)
T cd00314         198 WEWRVGSPDPDGVKGPGLLPSDYALLSDSETRALVERYASDQ  239 (255)
T ss_pred             cccccCCccCCCcccCCCchhhHHHhcCHhHHHHHHHHHhCH
Confidence                            99999999999999999999999874

Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised

>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases

Probab=100.00  E-value=2.1e-51  Score=405.68  Aligned_cols=235  Identities=22%  Similarity=0.249  Sum_probs=206.8

Q ss_pred             HHHHHHHhhhhccC--------Cccchhhhhhhhhcccc-------cCCC-ceeeeccCCCCcccccccccCCCCcchhH
Q 039585          116 KIVREFVHQKQTQS--------PSTAAGALRVFMHDCFV-------DGCD-GSVLISSNAFNVAERDSDINLSLPGDAFD  179 (368)
Q Consensus       116 ~iV~~~v~~~~~~~--------~~~a~~llRl~FHDc~v-------~GcD-gSill~~~~~~~~E~~~~~N~~l~~~~~~  179 (368)
                      ..|++.|++++...        ..+++.||||+|||+.+       |||+ |+|++.      .|++++.|.+| +++++
T Consensus        45 ~~~~~di~~ll~~s~~~wp~D~g~~gp~lvRlAWh~AgTy~~~d~~GG~ngg~iRf~------pe~~~~~N~gL-~~a~~  117 (409)
T cd00649          45 EALKEDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIADGRGGAGTGQQRFA------PLNSWPDNVNL-DKARR  117 (409)
T ss_pred             HHHHHHHHHHHhcccccCccccCCcccceeeeeccccccccCcCCCCCCCCCccccc------cccCcHhhhhH-HHHHH
Confidence            56888888888754        48999999999999986       8997 889885      69999999999 78999


Q ss_pred             HHHHHHHHHHhhCCCCCcHHHHHHhhhhhHHHhcCCCCcccccCCcCCcccccc--------------------------
Q 039585          180 VVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAA--------------------------  233 (368)
Q Consensus       180 ~i~~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~--------------------------  233 (368)
                      +++.||+++    +..||+||||+||+.+|||.+|||.|.+..||.|.......                          
T Consensus       118 ~L~pik~k~----~~~iS~ADL~~LaG~~AiE~~Ggp~ipf~~GR~Da~~~~~~v~wg~~~~~~~~~~~~~~~~l~~pl~  193 (409)
T cd00649         118 LLWPIKQKY----GNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGPEKEWLADKRYSGDRDLENPLA  193 (409)
T ss_pred             HHHHHHHHc----CCCccHHHHHHHHHHHHHHHcCCCcccccCCCCccCCCccccccCcchhcccccccccchhhccchh
Confidence            999999987    44699999999999999999999999999999999654320                          


Q ss_pred             ---------CCCC--CCCCCCCCHHHHHHHHHHCCCChhhhhhh-cccceeccccccccccccccCCCCCCCCCCCCHHH
Q 039585          234 ---------RIPG--NLPTNNMTMDEILKMFASKGFSIQEYVAL-MGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKY  301 (368)
Q Consensus       234 ---------~~~~--~lP~p~~~~~~l~~~F~~~Gl~~~dlVaL-sGaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~  301 (368)
                               .+++  .||++..++.+|++.|++||||++||||| +||||||++||.+|.+||.       +||++++.|
T Consensus       194 a~~mgliyv~Pegp~gLPdP~~sa~~LR~~F~RmGlnd~E~VAL~sGAHTiGkaHc~~~~~rlg-------~dP~~~~~~  266 (409)
T cd00649         194 AVQMGLIYVNPEGPDGNPDPLAAAKDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASHVG-------PEPEAAPIE  266 (409)
T ss_pred             hhhccccccCCCCCCCCCCCccCHHHHHHHHHHcCCCHHHHeeeccCCcceeecCcccccccCC-------CCCCcCHHH
Confidence                     0223  79999999999999999999999999999 5999999999999999982       699999999


Q ss_pred             HHHHh--hhcCCCCCCCcccccCC---CCCCCccchhhhhhccc------------------------------------
Q 039585          302 AEALK--AACKNHEQNITMTAFND---VMSPGKFDNSYFRGLPR------------------------------------  340 (368)
Q Consensus       302 ~~~L~--~~Cp~~~~~~~~~~~lD---~~tp~~FDN~Yy~~ll~------------------------------------  340 (368)
                      ++.|+  ++|+.+..+++..+.+|   +.||++|||+||++|+.                                    
T Consensus       267 ~~gLgw~~~Cp~g~g~~t~~sglDG~Wt~tP~~FDN~YF~nLl~~eW~~~~~p~g~~Q~~~~~~~~~~~~~d~~~~~~~~  346 (409)
T cd00649         267 QQGLGWKNSYGTGKGKDTITSGLEGAWTPTPTKWDNNYLKNLFGYEWELTKSPAGAWQWVPKNAAGENTVPDAHDPSKKH  346 (409)
T ss_pred             HHhhcccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHHhccceeccCCCCcccccccCccccccCCCcccccccc
Confidence            99996  89996431344466788   57999999999999998                                    


Q ss_pred             cccccccchhcccCCChHHHHHHhhhCC
Q 039585          341 GLGLLRVDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       341 ~~glL~SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                      ++|||+||++|+.|++|+++|++||+||
T Consensus       347 ~~gmL~SD~aL~~Dp~tr~iV~~yA~d~  374 (409)
T cd00649         347 APMMLTTDLALRFDPEYEKISRRFLENP  374 (409)
T ss_pred             CcccchhhHhhhcCccHHHHHHHHhcCH
Confidence            6799999999999999999999999985

This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms, where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to class I of the plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C

>TIGR00198 cat_per_HPI catalase/peroxidase HPI

Probab=100.00  E-value=9.1e-49  Score=409.15  Aligned_cols=249  Identities=23%  Similarity=0.250  Sum_probs=210.4

Q ss_pred             ccccc-ccccCchH-HHHHHHHHhhhhccC--------Cccchhhhhhhhhcccc-------cCCC-ceeeeccCCCCcc
Q 039585          102 LRADY-YKTTCPDF-EKIVREFVHQKQTQS--------PSTAAGALRVFMHDCFV-------DGCD-GSVLISSNAFNVA  163 (368)
Q Consensus       102 L~~~f-Y~~sCp~~-e~iV~~~v~~~~~~~--------~~~a~~llRl~FHDc~v-------~GcD-gSill~~~~~~~~  163 (368)
                      +..+| |.+.+-.+ ...|+++|++++...        ..+++.+|||+||++.+       |||+ |+|++.      .
T Consensus        39 ~~~~f~y~~~~~~ld~~a~~~dl~~l~~~s~~wwpad~g~ygp~~vRlAWHsAgTYr~~d~rGGa~gg~iRf~------P  112 (716)
T TIGR00198        39 MGEDFDYAEEFQQLDLAAVKQDLKHLMTDSQSWWPADWGHYGGLFIRMAWHAAGTYRIADGRGGAATGNQRFA------P  112 (716)
T ss_pred             CCCCccHHHHhhhccHHHHHHHHHHHHhcCcccCccccCCcceeeeeeeccccccccCCCCCCCCCCCceecc------c
Confidence            44444 44444332 346888999888764        47999999999999986       7984 889875      6


Q ss_pred             cccccccCCCCcchhHHHHHHHHHHHhhCCCCCcHHHHHHhhhhhHHHhcCCCCcccccCCcCCcccc------------
Q 039585          164 ERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQ------------  231 (368)
Q Consensus       164 E~~~~~N~~l~~~~~~~i~~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~------------  231 (368)
                      |++++.|.+| ++++.+++.||++    |+++|||||||+|||++||+.+|||.|.|.+||+|+....            
T Consensus       113 ~~sw~~N~~L-dka~~lL~pIk~k----yp~~VS~ADLivLAG~vAVE~~Ggp~i~f~~GR~D~~~~~~d~~~g~e~~~l  187 (716)
T TIGR00198       113 LNSWPDNVNL-DKARRLLWPIKKK----YGNKLSWADLIILAGTVAYESMGLKVFGFAGGREDIWEPDKDIYWGAEKEWL  187 (716)
T ss_pred             ccCchhhhhH-HHHHHHHHHHHHH----CCCceeHHHHHHHHHHHHHHHhCCCccCCCCCCCCCCCcccccccccccchh
Confidence            9999999999 7899999999886    7899999999999999999999999999999999994321            


Q ss_pred             ---c-----------c----------CCCCCCCCCCCCHHHHHHHHHHCCCChhhhhhhc-ccceecccccccccccccc
Q 039585          232 ---A-----------A----------RIPGNLPTNNMTMDEILKMFASKGFSIQEYVALM-GAHTIGFAHCKEFSDRLFK  286 (368)
Q Consensus       232 ---~-----------~----------~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLs-GaHtiG~~hc~~f~~Rl~~  286 (368)
                         .           .          +....+|++..++++|++.|++||||++|||||+ ||||||++||.+|.+||  
T Consensus       188 ~~~~~~~~~l~~p~a~~~~Gliyvnpeg~~~lPdP~~sa~~Lrd~F~rmGLnd~EmVALiaGaHTiGkaHc~s~~~rl--  265 (716)
T TIGR00198       188 TSSREDRESLENPLAATEMGLIYVNPEGPDGHPDPLCTAQDIRTTFARMGMNDEETVALIAGGHTVGKCHGAGPAELI--  265 (716)
T ss_pred             hccccccccccccchhhhccccccCcccccCCCCCCCCHHHHHHHHHHcCCChHHHeeeecCceeccccCCCcccccC--
Confidence               0           0          1112699999999999999999999999999995 99999999999999998  


Q ss_pred             CCCCCCCCCCCCHHHHHHHhhhcCCC-CC-CCcccccCC---CCCCCccchhhhhhcccc--------------------
Q 039585          287 FAPNQPTDPELNPKYAEALKAACKNH-EQ-NITMTAFND---VMSPGKFDNSYFRGLPRG--------------------  341 (368)
Q Consensus       287 ~~g~~~~dp~~~~~~~~~L~~~Cp~~-~~-~~~~~~~lD---~~tp~~FDN~Yy~~ll~~--------------------  341 (368)
                           ++||++++.|++.|+.+|+.. +. .++..+.+|   +.||++|||+||+||+.+                    
T Consensus       266 -----g~dP~~~~~~~~gLg~~c~~~~g~g~dt~~sglDG~wT~TP~~FDN~YF~nLl~~~w~~~~s~~g~~q~~~~~~~  340 (716)
T TIGR00198       266 -----GPDPEGAPIEEQGLGWHNQYGKGVGRDTMTSGLEVAWTTTPTQWDNGYFYMLFNYEWELKKSPAGAWQWEAVDAP  340 (716)
T ss_pred             -----CCCCCcCHHHHHHhcccCCCCCCCCCCcccccCCCCCCCCCCccchHHHHHHhcCCceeeecCCCCceeeecccc
Confidence                 279999999999999999842 11 233357788   579999999999999975                    


Q ss_pred             --------------ccccccchhcccCCChHHHHHHhhhCC
Q 039585          342 --------------LGLLRVDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       342 --------------~glL~SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                                    +|||+||++|+.|++|+.+|++||.|+
T Consensus       341 ~~~p~~~~~~~~~~~~mL~SDlaL~~Dp~~r~iVe~yA~d~  381 (716)
T TIGR00198       341 EIIPDVEDPNKKHNPIMLDADLALRFDPEFRKISRRFLREP  381 (716)
T ss_pred             cccccccccccccccCccchhHHhccCccHHHHHHHHhcCH
Confidence                          799999999999999999999999884

Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.

>PRK15061 catalase/hydroperoxidase HPI(I); Provisional

Probab=100.00  E-value=3.2e-46  Score=388.02  Aligned_cols=249  Identities=21%  Similarity=0.261  Sum_probs=210.8

Q ss_pred             ccccc-ccccCchH-HHHHHHHHhhhhccC--------Cccchhhhhhhhhcccc-------cCCC-ceeeeccCCCCcc
Q 039585          102 LRADY-YKTTCPDF-EKIVREFVHQKQTQS--------PSTAAGALRVFMHDCFV-------DGCD-GSVLISSNAFNVA  163 (368)
Q Consensus       102 L~~~f-Y~~sCp~~-e~iV~~~v~~~~~~~--------~~~a~~llRl~FHDc~v-------~GcD-gSill~~~~~~~~  163 (368)
                      +..+| |.+-+-.+ ...|++.|++++...        ..+++.+|||+||++.+       |||+ |+|++.      .
T Consensus        41 ~~~~f~y~~~~~~ld~~a~k~di~~l~~~sqdwwpaD~g~ygp~~vRlAWH~AgTYr~~d~rGGangg~iRf~------p  114 (726)
T PRK15061         41 MGEDFDYAEEFKKLDLEALKKDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRFA------P  114 (726)
T ss_pred             CCCCCCHHHHhchhhHHHHHHHHHHHHhcccccccccCCCccceeeeeeecccccccCcCCCCCCCCCcccCc------c
Confidence            44444 44444333 356888999888754        47999999999999986       7996 788875      6


Q ss_pred             cccccccCCCCcchhHHHHHHHHHHHhhCCCCCcHHHHHHhhhhhHHHhcCCCCcccccCCcCCcccccc----------
Q 039585          164 ERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAA----------  233 (368)
Q Consensus       164 E~~~~~N~~l~~~~~~~i~~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~----------  233 (368)
                      |++++.|.+| ++++.+++.||+++    +..||+||||+||+.+|||.+|||.|.+..||.|.......          
T Consensus       115 e~~w~~N~gL-~ka~~~L~pik~ky----~~~iS~ADLi~LaG~vAiE~~Ggp~i~f~~GR~D~~~~~~~v~wg~e~~~l  189 (726)
T PRK15061        115 LNSWPDNVNL-DKARRLLWPIKQKY----GNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPEEDVYWGPEKEWL  189 (726)
T ss_pred             cccchhhhhH-HHHHHHHHHHHHHh----CCCccHHHHHHHHHHHHHHHcCCCccCcCCCCCCCcCCccccccCcccccc
Confidence            9999999999 78999999999987    45699999999999999999999999999999998653320          


Q ss_pred             -------C---------------------CCCCCCCCCCCHHHHHHHHHHCCCChhhhhhhc-ccceecccccccccccc
Q 039585          234 -------R---------------------IPGNLPTNNMTMDEILKMFASKGFSIQEYVALM-GAHTIGFAHCKEFSDRL  284 (368)
Q Consensus       234 -------~---------------------~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLs-GaHtiG~~hc~~f~~Rl  284 (368)
                             .                     -...+|++..++.+|++.|++||||++|||||+ ||||||++||..|.+||
T Consensus       190 ~~~~r~~~~~~l~~pl~a~~mgliyvnpegp~glPdP~~sa~~lR~tF~RMGmnDeEtVALiaGgHT~GkaHca~~~~rl  269 (726)
T PRK15061        190 GGDERYSGERDLENPLAAVQMGLIYVNPEGPNGNPDPLAAARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGDASHV  269 (726)
T ss_pred             ccccccccccccccchhhhhccceecCCCCCCCCCCcccCHHHHHHHHHHcCCCHHHheeeccCCceeeeCCCcCccccc
Confidence                   0                     012379999999999999999999999999995 99999999999999998


Q ss_pred             ccCCCCCCCCCCCCHHHHHHHh--hhcCCCCCCCcccccCC---CCCCCccchhhhhhcccc------------------
Q 039585          285 FKFAPNQPTDPELNPKYAEALK--AACKNHEQNITMTAFND---VMSPGKFDNSYFRGLPRG------------------  341 (368)
Q Consensus       285 ~~~~g~~~~dp~~~~~~~~~L~--~~Cp~~~~~~~~~~~lD---~~tp~~FDN~Yy~~ll~~------------------  341 (368)
                             ++||++++.|++.|+  +.|+.+...++....+|   +.||++|||+||++|+.+                  
T Consensus       270 -------gpdP~~a~~~~qgLgw~~~c~~g~g~dt~tsGldG~Wt~tPt~fDN~YF~nLl~~~W~~~~sp~G~~qw~~~~  342 (726)
T PRK15061        270 -------GPEPEAAPIEEQGLGWKNSYGSGKGADTITSGLEGAWTTTPTQWDNGYFENLFGYEWELTKSPAGAWQWVPKD  342 (726)
T ss_pred             -------CCCCCcCHHHHHhccccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHhhCcceeccCCCccccccccC
Confidence                   369999999999996  89986321344566788   679999999999999985                  


Q ss_pred             ------------------ccccccchhcccCCChHHHHHHhhhCC
Q 039585          342 ------------------LGLLRVDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       342 ------------------~glL~SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                                        +|||+||++|+.|++|+++|++||+|+
T Consensus       343 ~~~~~~~pd~~~~~~~~~~~MLtSD~AL~~DP~~r~iV~~fA~d~  387 (726)
T PRK15061        343 GAAEDTVPDAHDPSKKHAPTMLTTDLALRFDPEYEKISRRFLENP  387 (726)
T ss_pred             ccccccCCcccccccccCcccccccHHhhcCCcHHHHHHHHhcCH
Confidence                              699999999999999999999999885

>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins

Probab=100.00  E-value=5.2e-46  Score=350.33  Aligned_cols=191  Identities=23%  Similarity=0.258  Sum_probs=153.3

Q ss_pred             HHHHHhhhhccCCccchhhhhhhhhccc-------ccCCCceeeeccCCCCccccc-ccccCCCCcchhHHHHHHHHHHH
Q 039585          118 VREFVHQKQTQSPSTAAGALRVFMHDCF-------VDGCDGSVLISSNAFNVAERD-SDINLSLPGDAFDVVIKIKNALE  189 (368)
Q Consensus       118 V~~~v~~~~~~~~~~a~~llRl~FHDc~-------v~GcDgSill~~~~~~~~E~~-~~~N~~l~~~~~~~i~~iK~~le  189 (368)
                      |..........+++++++||||+|||||       ++||||||+|+..   .+|+. ...|.+|  ++|+.|+.+     
T Consensus        27 v~~c~~~~~~~~~~~aa~~LRL~FHDc~t~~~~~g~gGcDgSIlle~~---~~En~G~~~n~~l--~~~~~i~~~-----   96 (264)
T cd08201          27 VTPCTDCAPGPGRQAAAEWLRTAFHDMATHNVDDGTGGLDASIQYELD---RPENIGSGFNTTL--NFFVNFYSP-----   96 (264)
T ss_pred             cccccccCcCCCccHHHHHHHHHHHhhcCcccCCCCCCCCcceeecCC---ChhhccCchhhcc--ccceeeccC-----
Confidence            3334444556788999999999999999       8999999999632   35665 4445566  777776543     


Q ss_pred             hhCCCCCcHHHHHHhhhhhHHHhcCCCCcccccCCcCCccccccCCCCCCCCCCCCHHHHHHHHHHCCCChhhhhhhcc-
Q 039585          190 DACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMG-  268 (368)
Q Consensus       190 ~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsG-  268 (368)
                           +||||||||||||+||+.+|||.|+|++||+|++++...    .||.++.++++|++.|+++||+.+|||+|+| 
T Consensus        97 -----~VScADiialAa~~AV~~~GGP~i~v~~GR~Da~~s~~~----glP~P~~~v~~l~~~Fa~~Gfs~~DmVaLsgg  167 (264)
T cd08201          97 -----RSSMADLIAMGVVTSVASCGGPVVPFRAGRIDATEAGQA----GVPEPQTDLGTTTESFRRQGFSTSEMIALVAC  167 (264)
T ss_pred             -----ccCHHHHHHHHHHHHHHHcCCCeecccccCCCccccccc----cCCCCccCHHHHHHHHHHcCCChHHHheeecC
Confidence                 599999999999999999999999999999999987643    3999999999999999999999999999995 


Q ss_pred             cceeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCCCCccchhhhhhccccc--c---
Q 039585          269 AHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLPRGL--G---  343 (368)
Q Consensus       269 aHtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~ll~~~--g---  343 (368)
                      |||||++||..|.+++-.  |.                        ..+...++| .||.+|||+||.+++.+.  +   
T Consensus       168 aHTiG~ahc~~f~~~~~~--g~------------------------~~~~~~p~d-stp~~FDn~~f~E~l~g~~~~~L~  220 (264)
T cd08201         168 GHTLGGVHSEDFPEIVPP--GS------------------------VPDTVLQFF-DTTIQFDNKVVTEYLSGTTNNPLV  220 (264)
T ss_pred             CeeeeecccccchhhcCC--cc------------------------ccCCCCCCC-CCccccchHHHHHHhcCCCCCcee
Confidence            999999999998776521  00                        001124566 699999999999999863  2   


Q ss_pred             -----ccccchhcccC
Q 039585          344 -----LLRVDNMLVKD  354 (368)
Q Consensus       344 -----lL~SD~~L~~d  354 (368)
                           -+.||..+++.
T Consensus       221 ~~~~~~~~sd~r~f~~  236 (264)
T cd08201         221 VGPNNTTNSDLRIFSS  236 (264)
T ss_pred             ecCCCCccchhhheec
Confidence                 34788888763

This is a subgroup of heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX) which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions.

>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases

Probab=100.00  E-value=2.4e-35  Score=281.14  Aligned_cols=202  Identities=18%  Similarity=0.197  Sum_probs=162.7

Q ss_pred             HHHhhhhccCCccchhhhhhhhhcccc-------cCCCce-eeeccCCCCcccccccccCC--CCcchhHHHHHHHHHHH
Q 039585          120 EFVHQKQTQSPSTAAGALRVFMHDCFV-------DGCDGS-VLISSNAFNVAERDSDINLS--LPGDAFDVVIKIKNALE  189 (368)
Q Consensus       120 ~~v~~~~~~~~~~a~~llRl~FHDc~v-------~GcDgS-ill~~~~~~~~E~~~~~N~~--l~~~~~~~i~~iK~~le  189 (368)
                      +.|++.+....-+++.||||+||++.+       |||+|+ |.|.      .|++|+.|.+  | .+++.+++.||+++.
T Consensus        17 ~~lk~~i~~~gl~~~~lvrlAWhsAgTyr~sd~rGGaNGariRl~------pe~~w~~N~~~~L-~~~~~~Le~ik~~~~   89 (297)
T cd08200          17 AALKAKILASGLTVSELVSTAWASASTFRNSDKRGGANGARIRLA------PQKDWEVNEPEEL-AKVLAVLEGIQKEFN   89 (297)
T ss_pred             HHHHHHHHhcCCcHHHHHHHhhhccccccCCCCCCCCCcccccCc------cccCcCccCcHHH-HHHHHHHHHHHHHhc
Confidence            567777777778899999999999986       899999 7774      7999999998  9 678999999999984


Q ss_pred             hh-CC-CCCcHHHHHHhhhhhHHHhcCC-----CCcccccCCcCCccccccCC--CCCCCCCC------------CCHHH
Q 039585          190 DA-CP-GVVSCADILTASTRNLVVMAGG-----PRFNVSFGRKDGLVSQAARI--PGNLPTNN------------MTMDE  248 (368)
Q Consensus       190 ~~-cp-~~VScADilalAa~~av~~~GG-----P~~~v~~GR~D~~~s~~~~~--~~~lP~p~------------~~~~~  248 (368)
                      .. -+ ..||+||+|+||+.+|||.+||     |.|++..||.|+........  ...+|.+.            ...+.
T Consensus        90 ~~~~~~~~vS~ADLivLaG~vAiE~agg~ag~~p~Ipf~pGR~Da~~~~td~~sf~~l~P~adg~rny~~~~~~~~~~~~  169 (297)
T cd08200          90 ESQSGGKKVSLADLIVLGGCAAVEKAAKDAGVDIKVPFTPGRTDATQEQTDVESFEVLEPKADGFRNYLKKGYRVPPEEM  169 (297)
T ss_pred             ccccCCccccHHHHHHHHhHHHHHHHHhccCCCceeccCCCCCCcccCCCCcccccccCCCCcccccccccCCCCCHHHH
Confidence            21 11 2699999999999999999999     99999999999986532110  12345332            13478


Q ss_pred             HHHHHHHCCCChhhhhhhcccc-eeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCCC
Q 039585          249 ILKMFASKGFSIQEYVALMGAH-TIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSP  327 (368)
Q Consensus       249 l~~~F~~~Gl~~~dlVaLsGaH-tiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp  327 (368)
                      |++.|.++|||++|||||+||| ++|++|..++       .|                    ++            +.+|
T Consensus       170 Lrd~f~rlglsd~EmvaL~Gg~r~lG~~~~~s~-------~G--------------------~w------------T~~p  210 (297)
T cd08200         170 LVDKAQLLTLTAPEMTVLVGGLRVLGANYGGSK-------HG--------------------VF------------TDRP  210 (297)
T ss_pred             HHHHHHhCCCChHHHhheecchhhcccCCCCCC-------CC--------------------CC------------cCCC
Confidence            9999999999999999999997 7999885321       11                    22            1479


Q ss_pred             Cccchhhhhhcccc----------------------cc---ccccchhcccCCChHHHHHHhhhC
Q 039585          328 GKFDNSYFRGLPRG----------------------LG---LLRVDNMLVKDPRTKPLVDQYASN  367 (368)
Q Consensus       328 ~~FDN~Yy~~ll~~----------------------~g---lL~SD~~L~~d~~t~~~V~~yA~d  367 (368)
                      .+|||.||+||+..                      ..   ++.+|.+|..|+++|.+|+.||+|
T Consensus       211 ~~f~N~fF~nLLd~~~~W~~~~~~~~~~~~~dr~~g~~~~~~t~~Dl~l~sd~~~R~~ve~YA~d  275 (297)
T cd08200         211 GVLTNDFFVNLLDMSTEWKPADEDDGLFEGRDRKTGEVKWTATRVDLVFGSNSELRAVAEVYASD  275 (297)
T ss_pred             CccccHHHHHHhcccceeeecCCCCCceeeccCCCCceeeccChhhhhhccCHHHHHHHHHHhcc
Confidence            99999999999951                      11   267899999999999999999997

This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do

>TIGR00198 cat_per_HPI catalase/peroxidase HPI

Probab=99.97  E-value=1.1e-30  Score=273.56  Aligned_cols=197  Identities=18%  Similarity=0.224  Sum_probs=156.4

Q ss_pred             HhhhhccCCccchhhhhhhhhcccc-------cCCCce-eeeccCCCCccccccccc--CCCCcchhHHHHHHHHHHHhh
Q 039585          122 VHQKQTQSPSTAAGALRVFMHDCFV-------DGCDGS-VLISSNAFNVAERDSDIN--LSLPGDAFDVVIKIKNALEDA  191 (368)
Q Consensus       122 v~~~~~~~~~~a~~llRl~FHDc~v-------~GcDgS-ill~~~~~~~~E~~~~~N--~~l~~~~~~~i~~iK~~le~~  191 (368)
                      +++.+....-.++.||||+||++.+       |||+|+ |+|.      .|++++.|  .+| .+.+++++.||+++.. 
T Consensus       437 lk~~i~~sgl~~~~lVr~AWhsA~Tyr~sd~rGGaNGariRl~------pe~~w~~N~p~gL-~~vl~~Le~Ik~~f~~-  508 (716)
T TIGR00198       437 LKQQILASGLSVSELVCTAWASASTFRSSDYRGGANGARIRLE------PQKNWPVNEPTRL-AKVLAVLEKIQAEFAK-  508 (716)
T ss_pred             HHHHHHhcCCcHHHHHHHhhhhcccccCCCCCCCCCcceeecc------hhcCcccCCHHHH-HHHHHHHHHHHHHcCC-
Confidence            3334556677889999999999986       899999 8775      79999999  899 6889999999999842 


Q ss_pred             CCCCCcHHHHHHhhhhhHHHhc---CCC--CcccccCCcCCccccccCCCCCCC-----CC----------CCCHHHHHH
Q 039585          192 CPGVVSCADILTASTRNLVVMA---GGP--RFNVSFGRKDGLVSQAARIPGNLP-----TN----------NMTMDEILK  251 (368)
Q Consensus       192 cp~~VScADilalAa~~av~~~---GGP--~~~v~~GR~D~~~s~~~~~~~~lP-----~p----------~~~~~~l~~  251 (368)
                        ..||+||||+||+.+|||.+   |||  .|++..||.|+..... +++...+     +.          ......|++
T Consensus       509 --~~vS~ADLivLaG~vAVE~aa~~gG~~~~Vpf~pGR~Da~~~~t-d~~~~~~l~p~adgfRn~~~~~~~~~~~~~l~d  585 (716)
T TIGR00198       509 --GPVSLADLIVLGGGAAVEKAALDAGISVNVPFLPGRVDATQAMT-DAESFTPLEPIADGFRNYLKRDYAVTPEELLLD  585 (716)
T ss_pred             --CcccHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCccccCCC-CccccccCCCCCcccchhccccccCCHHHHHHH
Confidence              26999999999999999998   898  5788999999976532 2222222     11          123566889


Q ss_pred             HHHHCCCChhhhhhhccc-ceeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCCCCcc
Q 039585          252 MFASKGFSIQEYVALMGA-HTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKF  330 (368)
Q Consensus       252 ~F~~~Gl~~~dlVaLsGa-HtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~F  330 (368)
                      .|.++||++.|||||+|| |++|++|..++       .|                    ++            +.+|.+|
T Consensus       586 ~a~~lglt~~EmvaL~Gg~r~lG~~~~~s~-------~G--------------------~~------------T~~p~~f  626 (716)
T TIGR00198       586 KAQLLTLTAPEMTVLIGGMRVLGANHGGSK-------HG--------------------VF------------TDRVGVL  626 (716)
T ss_pred             HHHhCCCChHHHHheecchhhccccCCCCC-------CC--------------------CC------------cCCCCcc
Confidence            999999999999999999 59999996321       11                    11            1479999


Q ss_pred             chhhhhhcccc----------------------c-ccc--ccchhcccCCChHHHHHHhhhCC
Q 039585          331 DNSYFRGLPRG----------------------L-GLL--RVDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       331 DN~Yy~~ll~~----------------------~-glL--~SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                      ||.||+|||..                      . .++  .+|.+|..|+++|.+|+.||+|+
T Consensus       627 ~NdfF~~LLd~~~~w~~~~~~~~~~~~~dr~tg~~~~~~t~~Dl~~~sd~~lra~aE~YA~dd  689 (716)
T TIGR00198       627 SNDFFVNLLDMAYEWRAADNNRYLFEGGDRQTGEVKWTATRVDLVFGSNSILRAVAEVYAQDD  689 (716)
T ss_pred             ccHHHHHHhcCCceeeecCCCCceeeeecCCCCceeeccChhheeeccCHHHHHHHHHHhccc
Confidence            99999999862                      1 222  67999999999999999999984

Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.

>PRK15061 catalase/hydroperoxidase HPI(I); Provisional

Probab=99.96  E-value=5.2e-30  Score=267.18  Aligned_cols=201  Identities=19%  Similarity=0.225  Sum_probs=162.0

Q ss_pred             HHHhhhhccCCccchhhhhhhhhcccc-------cCCCce-eeeccCCCCcccccccccC--CCCcchhHHHHHHHHHHH
Q 039585          120 EFVHQKQTQSPSTAAGALRVFMHDCFV-------DGCDGS-VLISSNAFNVAERDSDINL--SLPGDAFDVVIKIKNALE  189 (368)
Q Consensus       120 ~~v~~~~~~~~~~a~~llRl~FHDc~v-------~GcDgS-ill~~~~~~~~E~~~~~N~--~l~~~~~~~i~~iK~~le  189 (368)
                      ..+++.+....-..+.|||++||++.+       ||++|+ |+|.      .|++++.|+  +| .+.+++++.||+++.
T Consensus       442 ~~lk~~i~~~gl~~~~LVr~AWhsA~Tyr~sd~rGGaNGarIRl~------Pq~~w~~N~p~~L-~~vl~~LE~Ik~~f~  514 (726)
T PRK15061        442 AALKAKILASGLSVSELVSTAWASASTFRGSDKRGGANGARIRLA------PQKDWEVNEPAQL-AKVLAVLEGIQAEFN  514 (726)
T ss_pred             HHHHHHHHhcCCcHHHHHHHHHhhcccccCCCCCCCCCccceecc------cccCccccCHHHH-HHHHHHHHHHHHHHh
Confidence            566777777777889999999999976       899999 8875      799999998  89 578999999999985


Q ss_pred             hhC--CCCCcHHHHHHhhhhhHHHhc---CC--CCcccccCCcCCccccccCCC---CCCCCCC------------CCHH
Q 039585          190 DAC--PGVVSCADILTASTRNLVVMA---GG--PRFNVSFGRKDGLVSQAARIP---GNLPTNN------------MTMD  247 (368)
Q Consensus       190 ~~c--p~~VScADilalAa~~av~~~---GG--P~~~v~~GR~D~~~s~~~~~~---~~lP~p~------------~~~~  247 (368)
                      ..-  ...||+||||+||+.+|||.+   ||  |.|++..||.|+..... +.+   ..+|...            ...+
T Consensus       515 ~~~~~~~~vS~ADLivLaG~vAIE~aa~~aG~~~~VPf~pGR~Da~~~~t-d~esf~~l~P~Adgfrny~~~~~~~~~e~  593 (726)
T PRK15061        515 AAQSGGKKVSLADLIVLGGNAAVEQAAKAAGHDVTVPFTPGRTDATQEQT-DVESFAVLEPKADGFRNYLKKGYSVSPEE  593 (726)
T ss_pred             hccCCCCceeHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCCcccCCC-CcccccccCCCCccccccccccCCCCHHH
Confidence            432  125999999999999999998   68  89999999999976532 222   2456543            1247


Q ss_pred             HHHHHHHHCCCChhhhhhhcccc-eeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCC
Q 039585          248 EILKMFASKGFSIQEYVALMGAH-TIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMS  326 (368)
Q Consensus       248 ~l~~~F~~~Gl~~~dlVaLsGaH-tiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~t  326 (368)
                      .|++.|+++||++.|||||+||| ++|++|..++       .|                    ++            +.+
T Consensus       594 ~L~d~a~~lglt~~EmvaL~Gg~r~Lg~~~~~S~-------~G--------------------~~------------T~~  634 (726)
T PRK15061        594 LLVDKAQLLTLTAPEMTVLVGGLRVLGANYGGSK-------HG--------------------VF------------TDR  634 (726)
T ss_pred             HHHHHHHhCCCChHHHhheecchhhcccCCCCCC-------CC--------------------CC------------cCC
Confidence            89999999999999999999997 7899884321       11                    11            147


Q ss_pred             CCccchhhhhhcccc----------------------c-cc--cccchhcccCCChHHHHHHhhhC
Q 039585          327 PGKFDNSYFRGLPRG----------------------L-GL--LRVDNMLVKDPRTKPLVDQYASN  367 (368)
Q Consensus       327 p~~FDN~Yy~~ll~~----------------------~-gl--L~SD~~L~~d~~t~~~V~~yA~d  367 (368)
                      |.+|||.||+||+..                      . .+  +.+|..|.+|+++|.+|+.||+|
T Consensus       635 p~~fsNdfFvnLLdm~~~W~~~~~~~~~ye~~Dr~tg~~~~~~t~~Dlvfgsds~lRa~aEvYA~d  700 (726)
T PRK15061        635 PGVLTNDFFVNLLDMGTEWKPTDEDEEVYEGRDRKTGEVKWTATRVDLVFGSNSQLRALAEVYASD  700 (726)
T ss_pred             CCccccHHHHHHhcCCceeeecCCCCCceeeccCCCcceeeccChhheecccCHHHHHHHHHHhcc
Confidence            999999999999951                      1 12  47899999999999999999987

>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]

Probab=99.96  E-value=1.6e-28  Score=245.42  Aligned_cols=233  Identities=21%  Similarity=0.235  Sum_probs=184.0

Q ss_pred             HHHHHHhhhhccC--------Cccchhhhhhhhhcccc-------cCCC-ceeeeccCCCCcccccccccCCCCcchhHH
Q 039585          117 IVREFVHQKQTQS--------PSTAAGALRVFMHDCFV-------DGCD-GSVLISSNAFNVAERDSDINLSLPGDAFDV  180 (368)
Q Consensus       117 iV~~~v~~~~~~~--------~~~a~~llRl~FHDc~v-------~GcD-gSill~~~~~~~~E~~~~~N~~l~~~~~~~  180 (368)
                      .|+..++.++...        ...++.+|||+||-+++       ||.. |..++      ..+.+++.|.+| ++++.+
T Consensus        71 Avk~Dl~aLmtdSqdWWPAD~GhYGplfIRmAWHsAGTYRi~DGRGGa~~G~qRF------aPlnSWPDN~nL-DKarRL  143 (730)
T COG0376          71 AVKRDLKALMTDSQDWWPADFGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRF------APLNSWPDNANL-DKARRL  143 (730)
T ss_pred             HHHHHHHHHhhcccccCcccccccccceeeeeecccCceecccCCCCCCCCceec------ccccCCCcccch-HHHHHH
Confidence            4667777776654        36889999999999986       3443 44554      367889999999 899999


Q ss_pred             HHHHHHHHHhhCCCCCcHHHHHHhhhhhHHHhcCCCCcccccCCcCCccccc----------------------------
Q 039585          181 VIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQA----------------------------  232 (368)
Q Consensus       181 i~~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~----------------------------  232 (368)
                      ++.||+++    +..||+||||.||+.+|++.+|++.|.+..||.|-.....                            
T Consensus       144 LWPIKkKY----G~kiSWaDL~iLaGnvAlEsMGfktfGFa~GR~D~wepd~dvyWG~e~~wl~d~Ry~~~~~Le~Plaa  219 (730)
T COG0376         144 LWPIKKKY----GRKISWADLIILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGSEKTWLGDERYSGDRDLENPLAA  219 (730)
T ss_pred             hhhHhHhh----cccccHhHhhhhhchhhhhhcCCccccccCCCCcCCCCccccccCccccccccccccccccccCchhh
Confidence            99999997    5689999999999999999999999999999999766543                            


Q ss_pred             ----------cCCCCCCCCCCCCHHHHHHHHHHCCCChhhhhhhc-ccceeccccccccccccccCCCCCCCCCCCCHHH
Q 039585          233 ----------ARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALM-GAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKY  301 (368)
Q Consensus       233 ----------~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLs-GaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~  301 (368)
                                .+ .+..|++..+..+++..|++|++|++|+|||+ ||||+|.+|...-.+.+       +++|.-.+--
T Consensus       220 vqMGLIYVNPEG-png~PDpl~aA~dIRetFaRMaMNDeETVALiaGGHtfGKtHGag~a~~v-------g~ePe~a~ie  291 (730)
T COG0376         220 VQMGLIYVNPEG-PNGNPDPLAAARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASNV-------GPEPEAAPIE  291 (730)
T ss_pred             heeeeEEeCCCC-CCCCCChhhhHHHHHHHHHHhcCCcHhhhhhhhcccccccccCCCchhhc-------CCCccccchh
Confidence                      12 24689999999999999999999999999998 69999999976533322       3577666655


Q ss_pred             HHHHhhh--cCCCCCCCcccccCC---CCCCCccchhhhhhcccc-----------------------------------
Q 039585          302 AEALKAA--CKNHEQNITMTAFND---VMSPGKFDNSYFRGLPRG-----------------------------------  341 (368)
Q Consensus       302 ~~~L~~~--Cp~~~~~~~~~~~lD---~~tp~~FDN~Yy~~ll~~-----------------------------------  341 (368)
                      .+.|-..  |..+...++.+..+.   ..||++|||+||.+|+..                                   
T Consensus       292 ~qGlGW~~~~g~G~G~dtitsGlE~~Wt~tPT~w~n~ff~~Lf~yEWeltksPAGa~Qw~~k~~~~~~~pd~~dp~~~~~  371 (730)
T COG0376         292 QQGLGWANTYGSGKGPDTITSGLEGAWTTTPTQWSNEFFENLFNYEWELTKSPAGAWQWDAKSAAAETIPDAHDPSKKHG  371 (730)
T ss_pred             hhccccccccCCCcCcccccccccccCCCCcchhhhHHHHHHhccceeeecCCCccccccccCccccCCCCCCCcccccC
Confidence            6666543  322110233344444   468999999999999852                                   


Q ss_pred             ccccccchhcccCCChHHHHHHhhhCC
Q 039585          342 LGLLRVDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       342 ~glL~SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                      -+||++|.+|..|++++++.++|..|+
T Consensus       372 p~MlttDlaLr~DP~Y~kIs~rf~e~p  398 (730)
T COG0376         372 PMMLTTDLALRFDPEYEKISRRFLEDP  398 (730)
T ss_pred             ceeeccchhhhcChHHHHHHHHHHhCH
Confidence            269999999999999999999998874

>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]

Probab=99.19  E-value=4.1e-11  Score=121.27  Aligned_cols=198  Identities=21%  Similarity=0.279  Sum_probs=136.9

Q ss_pred             HHHhhhhccCCccchhhhhhhhhcccc-------cCCCce-eeeccCCCCcccccccccC--CCCcchhHHHHHHHHHHH
Q 039585          120 EFVHQKQTQSPSTAAGALRVFMHDCFV-------DGCDGS-VLISSNAFNVAERDSDINL--SLPGDAFDVVIKIKNALE  189 (368)
Q Consensus       120 ~~v~~~~~~~~~~a~~llRl~FHDc~v-------~GcDgS-ill~~~~~~~~E~~~~~N~--~l~~~~~~~i~~iK~~le  189 (368)
                      ..++..+....-....|+-.+|..+-+       ||.+|. |.|.      +.++|+.|.  -| .+.+.+++.|++.+.
T Consensus       452 ~~lK~~IlasgLsvs~lVstAWaSAsTfRgsDkRGGaNGaRirLa------PqkdWevN~P~~l-~kvl~~le~iq~~fn  524 (730)
T COG0376         452 AALKAKILASGLSVSQLVSTAWASASTFRGSDKRGGANGARIRLA------PQKDWEVNQPAEL-AKVLAVLEKIQKEFN  524 (730)
T ss_pred             HHHHHHHHHccCCHHHHHHHHHHhhhhccCCcccCCcCcceEeec------ccccCCCCCHHHH-HHHHHHHHHHHHHhc
Confidence            355666666677778899999988754       799988 6664      689999995  45 367888999998886


Q ss_pred             hhCCCCCcHHHHHHhhhhhHHHh---cCCCCc--ccccCCcCCccccccCCCCCC--CCC--C----------CCHHHHH
Q 039585          190 DACPGVVSCADILTASTRNLVVM---AGGPRF--NVSFGRKDGLVSQAARIPGNL--PTN--N----------MTMDEIL  250 (368)
Q Consensus       190 ~~cp~~VScADilalAa~~av~~---~GGP~~--~v~~GR~D~~~s~~~~~~~~l--P~p--~----------~~~~~l~  250 (368)
                          ..||.||+|+|++..|||.   .+|-.+  ++..||.|+...........+  |-.  +          ....-|+
T Consensus       525 ----kkvSlADlIVL~G~a~ie~AAk~aG~~v~VPF~pGR~DA~qeqtDv~sf~~LeP~aDGfRNy~~~~~~~~pe~~Lv  600 (730)
T COG0376         525 ----KKVSLADLIVLGGNAAVEKAAKAAGFSVTVPFAPGRTDASQEQTDVESFAVLEPIADGFRNYVKKDYVLTPEELLV  600 (730)
T ss_pred             ----CccchhHheeecchHHHHHHHHhcCceeeeccCCCCcccchhhcchhhhhcccccchhhhhhccCCCcCCHHHHHH
Confidence                3599999999999999986   467655  456899998654321111111  111  1          1234467


Q ss_pred             HHHHHCCCChhhhhhhccc-ceeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCCCCc
Q 039585          251 KMFASKGFSIQEYVALMGA-HTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGK  329 (368)
Q Consensus       251 ~~F~~~Gl~~~dlVaLsGa-HtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~  329 (368)
                      ++-+-++|+.-||++|+|| ..+|..+.           |+                          ...+.-|  .|.+
T Consensus       601 DkAqlL~LtapemtVLiGGlRvLg~n~g-----------~s--------------------------~~GVfT~--~pg~  641 (730)
T COG0376         601 DKAQLLTLTAPEMTVLIGGLRVLGANYG-----------GS--------------------------KHGVFTD--RPGV  641 (730)
T ss_pred             HHHHHhccCCccceEEEcceEeeccCCC-----------CC--------------------------ccceecc--Cccc
Confidence            8888899999999999987 44454321           11                          0112222  5677


Q ss_pred             cchhhhhhcccc----------c----------cc-----cccchhcccCCChHHHHHHhhhC
Q 039585          330 FDNSYFRGLPRG----------L----------GL-----LRVDNMLVKDPRTKPLVDQYASN  367 (368)
Q Consensus       330 FDN~Yy~~ll~~----------~----------gl-----L~SD~~L~~d~~t~~~V~~yA~d  367 (368)
                      +.|.||.||+..          +          |-     -..|..+-++++.|.+.+.||.|
T Consensus       642 LtndFFvnLlDM~~~W~~~~~~~~~feg~DrktG~~kwt~trvDLvfGsns~LRA~aEVYa~d  704 (730)
T COG0376         642 LTNDFFVNLLDMGTEWKPTDDARGLFEGRDRKTGEVKWTATRVDLVFGSNSELRALAEVYASD  704 (730)
T ss_pred             ccchhhhhhhhccceeeeccccccceeccccccCceEeeeeEEeEEecCcHHHHHHHHHHhcc
Confidence            778888887752          1          21     14677777888999999999876

>KOG1924 consensus RhoA GTPase effector DIA/Diaphanous [Signal transduction mechanisms; Cytoskeleton]

Probab=97.41  E-value=0.00066  Score=72.51  Aligned_cols=15  Identities=47%  Similarity=0.600  Sum_probs=9.5

Q ss_pred             HCCCCh-hhhhhhccc
Q 039585          255 SKGFSI-QEYVALMGA  269 (368)
Q Consensus       255 ~~Gl~~-~dlVaLsGa  269 (368)
                      +.+|+. -|+|.|+|-
T Consensus       814 SesFs~lLeLvLl~GN  829 (1102)
T KOG1924|consen  814 SESFSKLLELVLLVGN  829 (1102)
T ss_pred             hhhHHHHHHHHHHHhc
Confidence            456643 678877763

>KOG1924 consensus RhoA GTPase effector DIA/Diaphanous [Signal transduction mechanisms; Cytoskeleton]

Probab=97.18  E-value=0.0018  Score=69.42  Aligned_cols=10  Identities=30%  Similarity=0.365  Sum_probs=4.1

Q ss_pred             HHHHHHHhhC
Q 039585          183 KIKNALEDAC  192 (368)
Q Consensus       183 ~iK~~le~~c  192 (368)
                      .+|+++|..|
T Consensus       753 e~Kaeye~l~  762 (1102)
T KOG1924|consen  753 ELKAEYEDLP  762 (1102)
T ss_pred             HHHHhccCCC
Confidence            3444444333

>PHA03247 large tegument protein UL36; Provisional

Probab=95.27  E-value=0.099  Score=62.76  Aligned_cols=11  Identities=27%  Similarity=0.211  Sum_probs=7.5

Q ss_pred             HHHHHHCCCCh
Q 039585          250 LKMFASKGFSI  260 (368)
Q Consensus       250 ~~~F~~~Gl~~  260 (368)
                      +.+|+.-|++.
T Consensus      3100 RrY~r~Tg~sa 3110 (3151)
T PHA03247       3100 RRYVRSTGRSA 3110 (3151)
T ss_pred             HHHHhhccHHH
Confidence            46667777775

>PF07174 FAP: Fibronectin-attachment protein (FAP); InterPro: IPR010801 This family contains bacterial fibronectin-attachment proteins (FAP)

Probab=91.93  E-value=2  Score=41.41  Aligned_cols=8  Identities=38%  Similarity=0.522  Sum_probs=4.7

Q ss_pred             CCCceeee
Q 039585          148 GCDGSVLI  155 (368)
Q Consensus       148 GcDgSill  155 (368)
                      +-|++|+|
T Consensus       159 andt~v~l  166 (297)
T PF07174_consen  159 ANDTSVVL  166 (297)
T ss_pred             CCCceEEe
Confidence            35666665

Family members are rich in alanine and proline, are approximately 300 long, and seem to be restricted to mycobacteria. These proteins contain a fibronectin-binding motif that allows mycobacteria to bind to fibronectin in the extracellular matrix [].; GO: 0050840 extracellular matrix binding, 0005576 extracellular region

>PHA03378 EBNA-3B; Provisional

Probab=90.50  E-value=1.5  Score=47.24  Aligned_cols=14  Identities=14%  Similarity=0.392  Sum_probs=7.5

Q ss_pred             HHHHHHHHhhhhcc
Q 039585          115 EKIVREFVHQKQTQ  128 (368)
Q Consensus       115 e~iV~~~v~~~~~~  128 (368)
                      ..|+++.+..-+++
T Consensus       822 k~ilrqlltggvk~  835 (991)
T PHA03378        822 KQILRQLLTGGVKR  835 (991)
T ss_pred             HHHHHHHhhccccc
Confidence            45666555555444

>PRK12270 kgd alpha-ketoglutarate decarboxylase; Reviewed

Probab=89.48  E-value=2.8  Score=47.33  Aligned_cols=31  Identities=23%  Similarity=0.233  Sum_probs=26.4

Q ss_pred             HHHHHHHHhhCCCCCcHHHHHHhhhhhHHHh
Q 039585          182 IKIKNALEDACPGVVSCADILTASTRNLVVM  212 (368)
Q Consensus       182 ~~iK~~le~~cp~~VScADilalAa~~av~~  212 (368)
                      ..||..+.+.-.+.||.-+||..|...|+..
T Consensus       156 ~~In~~l~r~~GgKVSFThlI~kAvv~AL~~  186 (1228)
T PRK12270        156 IVINNHLKRTRGGKVSFTHLIGYALVQALKA  186 (1228)
T ss_pred             HHHHHHhhhccCCcccHHHHHHHHHHHHHHh
Confidence            3567788777788999999999999999875

>PHA03378 EBNA-3B; Provisional

Probab=87.00  E-value=3.1  Score=44.85  Aligned_cols=18  Identities=11%  Similarity=0.091  Sum_probs=8.2

Q ss_pred             HHHHHHHHhhhhccCCcc
Q 039585          115 EKIVREFVHQKQTQSPST  132 (368)
Q Consensus       115 e~iV~~~v~~~~~~~~~~  132 (368)
                      ..-.+..+++++......
T Consensus       818 ~gp~k~ilrqlltggvk~  835 (991)
T PHA03378        818 QGPTKQILRQLLTGGVKR  835 (991)
T ss_pred             cCcHHHHHHHHhhccccc
Confidence            344555555544444333

>PRK14950 DNA polymerase III subunits gamma and tau; Provisional

Probab=86.30  E-value=6.5  Score=42.11  Aligned_cols=12  Identities=17%  Similarity=0.224  Sum_probs=7.8

Q ss_pred             hhhhcccceecc
Q 039585          263 YVALMGAHTIGF  274 (368)
Q Consensus       263 lVaLsGaHtiG~  274 (368)
                      .+-+.|||-||.
T Consensus       569 a~~if~~~~~~~  580 (585)
T PRK14950        569 AQNIFDAQIISV  580 (585)
T ss_pred             HHHHcCCeEEee
Confidence            445568887775

>PF07174 FAP: Fibronectin-attachment protein (FAP); InterPro: IPR010801 This family contains bacterial fibronectin-attachment proteins (FAP)

Probab=86.29  E-value=8  Score=37.40  Aligned_cols=7  Identities=57%  Similarity=0.857  Sum_probs=4.5

Q ss_pred             ceeeecc
Q 039585          151 GSVLISS  157 (368)
Q Consensus       151 gSill~~  157 (368)
                      |+.||..
T Consensus       138 G~alls~  144 (297)
T PF07174_consen  138 GSALLSK  144 (297)
T ss_pred             ceeeecc
Confidence            6777753

Family members are rich in alanine and proline, are approximately 300 long, and seem to be restricted to mycobacteria. These proteins contain a fibronectin-binding motif that allows mycobacteria to bind to fibronectin in the extracellular matrix [].; GO: 0050840 extracellular matrix binding, 0005576 extracellular region

>PRK14950 DNA polymerase III subunits gamma and tau; Provisional

Probab=82.49  E-value=4.6  Score=43.26  Aligned_cols=9  Identities=22%  Similarity=-0.141  Sum_probs=4.5

Q ss_pred             HHHHHHHHh
Q 039585          115 EKIVREFVH  123 (368)
Q Consensus       115 e~iV~~~v~  123 (368)
                      |.-|.+.|+
T Consensus       471 w~~~~~~~~  479 (585)
T PRK14950        471 WKQILRDVP  479 (585)
T ss_pred             HHHHHHHHh
Confidence            444555554

>KOG3671 consensus Actin regulatory protein (Wiskott-Aldrich syndrome protein) [Signal transduction mechanisms; Cytoskeleton]

Probab=81.95  E-value=8.9  Score=40.06  Aligned_cols=7  Identities=14%  Similarity=0.501  Sum_probs=3.6

Q ss_pred             HHHHHHH
Q 039585          179 DVVIKIK  185 (368)
Q Consensus       179 ~~i~~iK  185 (368)
                      +++++|+
T Consensus       497 ~LmaqIR  503 (569)
T KOG3671|consen  497 ALMAQIR  503 (569)
T ss_pred             HHHHHHH
Confidence            3455555

>PF01690 PLRV_ORF5: Potato leaf roll virus readthrough protein; InterPro: IPR002929 This family consists mainly of the Potato leafroll virus (PLrV) read through protein otherwise known as the minor capsid protein

Probab=81.86  E-value=1.2  Score=46.06  Aligned_cols=9  Identities=33%  Similarity=0.545  Sum_probs=4.9

Q ss_pred             CCCceeeec
Q 039585          148 GCDGSVLIS  156 (368)
Q Consensus       148 GcDgSill~  156 (368)
                      |-|||++|-
T Consensus       191 ~~~~~f~l~  199 (465)
T PF01690_consen  191 GDDASFFLV  199 (465)
T ss_pred             CCCceEEEe
Confidence            555555554

This is generated via a readthrough of open reading frame 3, the coat protein, allowing transcription of open reading frame 5 to give an extended coat protein with a large C-terminal addition or read through domain []. The read through protein is essential for the circulative aphid transmission of PLrV [] and Beet western yellows virus []. The N-terminal region of the luteovirus readthrough domain determines virus binding to Buchnera GroEL and is essential for virus persistence in the aphid [].; GO: 0019028 viral capsid

>PF01690 PLRV_ORF5: Potato leaf roll virus readthrough protein; InterPro: IPR002929 This family consists mainly of the Potato leafroll virus (PLrV) read through protein otherwise known as the minor capsid protein

Probab=81.35  E-value=1.3  Score=45.85  Aligned_cols=8  Identities=25%  Similarity=0.729  Sum_probs=4.5

Q ss_pred             cccccccc
Q 039585          102 LRADYYKT  109 (368)
Q Consensus       102 L~~~fY~~  109 (368)
                      ++.+||++
T Consensus        76 i~a~w~sn   83 (465)
T PF01690_consen   76 IDAGWYSN   83 (465)
T ss_pred             ecceeEec
Confidence            55555654

This is generated via a readthrough of open reading frame 3, the coat protein, allowing transcription of open reading frame 5 to give an extended coat protein with a large C-terminal addition or read through domain []. The read through protein is essential for the circulative aphid transmission of PLrV [] and Beet western yellows virus []. The N-terminal region of the luteovirus readthrough domain determines virus binding to Buchnera GroEL and is essential for virus persistence in the aphid [].; GO: 0019028 viral capsid

>PRK07764 DNA polymerase III subunits gamma and tau; Validated

Probab=80.43  E-value=23  Score=39.76  Aligned_cols=34  Identities=15%  Similarity=0.170  Sum_probs=15.8

Q ss_pred             HHHHHHHHHhhhhccCCccchhhhhhhhhcccccCCCceee
Q 039585          114 FEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVL  154 (368)
Q Consensus       114 ~e~iV~~~v~~~~~~~~~~a~~llRl~FHDc~v~GcDgSil  154 (368)
                      .|.-|.+.|.+.-.       .+.++.--...+.|-||..|
T Consensus       515 ~W~~Il~~V~~~~r-------~~~~~~l~~a~v~~~~g~~L  548 (824)
T PRK07764        515 RWPEILAAVPKRSR-------KTWAILLPEATVLGVRGDTL  548 (824)
T ss_pred             HHHHHHHHHhhccH-------HHHHHhcccceeecccCCEE
Confidence            46556655555321       22233333334555666644

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	368
3hdl_A	304	Crystal Structure Of Highly Glycosylated Peroxidase		1e-42
1pa2_A	306	Arabidopsis Thaliana Peroxidase A2 Length = 306		2e-42
1bgp_A	309	Crystal Structure Of Barley Grain Peroxidase 1 Leng		2e-41
1fhf_A	304	The Structure Of Soybean Peroxidase Length = 304		2e-40
1sch_A	294	Peanut Peroxidase Length = 294		2e-40
4a5g_A	308	Raphanus Sativus Anionic Peroxidase. Length = 308		2e-39
1qgj_A	300	Arabidopsis Thaliana Peroxidase N Length = 300		4e-39
1gx2_A	309	Recombinant Horseradish Peroxidase Phe209ser Comple		2e-37
2ylj_A	306	Horse Radish Peroxidase, Mutant S167y Length = 306		3e-37
1gwo_A	309	Recombinant Horseradish Peroxidase C1a Ala170gln Le		4e-37
2atj_A	308	Recombinant Horseradish Peroxidase Complex With Ben		4e-37
1atj_A	306	Recombinant Horseradish Peroxidase C1a Length = 306		4e-37
6atj_A	308	Recombinant Horseradish Peroxidase C Complex With F		4e-37
1w4w_A	323	Ferric Horseradish Peroxidase C1a In Complex With F		4e-37
3atj_A	309	Heme Ligand Mutant Of Recombinant Horseradish Perox		4e-37
1gwu_A	309	Recombinant Horseradish Peroxidase C1a Ala140gly Le		6e-37
1gw2_A	308	Recombinant Horseradish Peroxidase C1a Thr171ser In		1e-36
4atj_A	309	Distal Heme Pocket Mutant (H42e) Of Recombinant Hor		4e-36
1kzm_A	308	Distal Heme Pocket Mutant (r38s/h42e) Of Recombinan		3e-35
2cl4_X	261	Ascorbate Peroxidase R172a Mutant Length = 261		4e-07
1oaf_A	261	Ascobate Peroxidase From Soybean Cytosol In Complex		5e-07
2xif_A	249	The Structure Of Ascorbate Peroxidase Compound Ii L		6e-07
2vcf_X	264	Structure Of Isoniazid (Inh) Bound To Cytosolic Soy		6e-07
3riw_A	271	The Crystal Structure Of Leishmania Major Peroxidas		6e-07
1apx_A	249	Crystal Structure Of Recombinant Ascorbate Peroxida		6e-07
4ged_A	268	Crystal Structure Of The Leishmania Major Peroxidas		7e-07
3riv_A	271	The Crystal Structure Of Leishmania Major Peroxidas		7e-07
2ggn_X	261	Conformational Mobility In The Active Site Of A Hem		7e-07
2y6b_A	249	Ascorbate Peroxidase R38k Mutant Length = 249		1e-06
2y6a_A	249	Ascorbate Peroxidase R38a Mutant Length = 249		2e-06
2vcs_A	261	Structure Of Isoniazid (Inh) Bound To Cytosolic Soy		2e-06
3zch_A	261	Ascorbate Peroxidase W41a-h42m Mutant Length = 261		2e-06
3zcg_A	261	Ascorbate Peroxidase W41a-h42c Mutant Length = 261		2e-06
3zcy_A	249	Ascorbate Peroxidase W41a-h42y Mutant Length = 249		3e-06
1iyn_A	295	Crystal Structure Of Chloroplastic Ascorbate Peroxi		2e-04

>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree Length = 304

Iteration: 1
 Score =  170 bits (431), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 98/268 (36%), Positives = 140/268 (52%), Gaps = 4/268 (1%)
Query: 102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN 161
           L+  +Y T+CP  E +V++ V      +   A G +R+  HDCFV GCD SVL+ S A N
Sbjct: 2   LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANN 61
Query: 162 VAERDS-DINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNV 220
            AE+D+   N SL G  F+V+   K+A+E ACP  VSCADIL  + R+   +AG   + V
Sbjct: 62  TAEKDAIPNNPSLRG--FEVITAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQV 119
Query: 221 SFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKEF 280
             GR+DG VS A+     +P+      +++  FA+K  +  E V L GAH+IG AHC  F
Sbjct: 120 PSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADEMVTLSGAHSIGVAHCSSF 179
Query: 281 SDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNIT-MTAFNDVMSPGKFDNSYFXXXX 339
           ++RL+ F      DP L+P YA  L+  C  +    T +T   D+++P   DN Y+    
Sbjct: 180 TNRLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDIITPSVLDNMYYTGVQ 239
Query: 340 XXXXXXXVDNMLVKDPRTKPLVDQYASN 367
                   D  LV +      V   A N
Sbjct: 240 LTLGLLTSDQALVTEANLSAAVKANAMN 267

>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2 Length = 306

Iteration: 1
 Score =  169 bits (429), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 94/269 (34%), Positives = 139/269 (51%), Gaps = 4/269 (1%)
Query: 102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN 161
           L A +Y  TCP+   IVR  + Q         A  +R+  HDCFV+GCD S+L+      
Sbjct: 3   LNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTGSI 62
Query: 162 VAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVS 221
            +E+++  N++     F+VV  IK ALE+ACPGVVSC+D+L  ++   V +AGGP + V 
Sbjct: 63  QSEKNAGPNVN-SARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVL 121
Query: 222 FGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKEFS 281
            GR+D L +  A    ++P+   ++  I   F++ G +  + VAL GAHT G A C  F+
Sbjct: 122 LGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGRARCGVFN 181
Query: 282 DRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFXXXXXX 341
           +RLF F+     DP LN      L+  C  +    T+T   D+ +P  FDN+YF      
Sbjct: 182 NRLFNFSGTGNPDPTLNSTLLSTLQQLCPQNGSASTITNL-DLSTPDAFDNNYFANLQSN 240
Query: 342 XXXXXVDNML--VKDPRTKPLVDQYASNE 368
                 D  L       T  +V  +ASN+
Sbjct: 241 DGLLQSDQELFSTTGSSTIAIVTSFASNQ 269

>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 Length = 309

Iteration: 1
 Score =  166 bits (419), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 100/277 (36%), Positives = 144/277 (51%), Gaps = 13/277 (4%)
Query: 96  PSAKPALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLI 155
           P   P L  D+Y  TCP  E IVREFV +   +    AAG LR+  HDCFV GCD SVL+
Sbjct: 3   PPVAPGLSFDFYWQTCPRAESIVREFVQEAVRKDIGLAAGLLRLHFHDCFVQGCDASVLL 62
Query: 156 SSNAFNVAERDSDINLSLPGDAFDVVIKIKNALEDACPG-VVSCADILTASTRNLVVMAG 214
             +A    E+ +  NL+L   AF  V  I++ LE  C G VVSC+DIL  + R+ VV++G
Sbjct: 63  DGSATGPGEQQAPPNLTLRPSAFKAVNDIRDRLERECRGAVVSCSDILALAARDSVVVSG 122
Query: 215 GPRFNVSFGRKDGL-VSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIG 273
           GP + V  GR+D    +    +  +LP  +  +  +L +    G    + V + G HTIG
Sbjct: 123 GPDYRVPLGRRDSRSFASTQDVLSDLPGPSSNVQSLLALLGRLGLDATDLVTISGGHTIG 182
Query: 274 FAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAAC--KNHEQNITMTAFNDVMSPGKFD 331
            AHC  F DRLF     +P DP ++P +   LK  C  K  ++   +    DV +P  FD
Sbjct: 183 LAHCSSFEDRLFP----RP-DPTISPTFLSRLKRTCPAKGTDRRTVL----DVRTPNVFD 233
Query: 332 NSYFXXXXXXXXXXXVDNMLVKDPRTKPLVDQYASNE 368
           N Y+            D  L  +  T+P+V+++A ++
Sbjct: 234 NKYYIDLVNREGLFVSDQDLFTNAITRPIVERFAQSQ 270

>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase Length = 304

Iteration: 1
 Score =  162 bits (411), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 94/270 (34%), Positives = 137/270 (50%), Gaps = 6/270 (2%)
Query: 102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN 161
           L   +Y+ TCP+   IV   +       P   A  +R+  HDCFV GCDGSVL+++    
Sbjct: 2   LTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTI 61
Query: 162 VAERDSDINL-SLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNV 220
            +E+D+  N+ S+ G   DVV  IK A+E++CP  VSCADIL  +     V+ GGP + V
Sbjct: 62  ESEQDALPNINSIRG--LDVVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPV 119
Query: 221 SFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKEF 280
             GR+D L +       NLP     + ++   FA +G +  + V L G HT G A C  F
Sbjct: 120 PLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTLDLVTLSGGHTFGRARCSTF 179
Query: 281 SDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFXXXXX 340
            +RL+ F+     DP LN  Y E L+A C  +     +T   D+ +P +FDN Y+     
Sbjct: 180 INRLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNLTNL-DLSTPDQFDNRYYSNLLQ 238
Query: 341 XXXXXXVDNMLVKDP--RTKPLVDQYASNE 368
                  D  L   P   T P+V+ ++SN+
Sbjct: 239 LNGLLQSDQELFSTPGADTIPIVNSFSSNQ 268

>pdb|1SCH|A Chain A, Peanut Peroxidase Length = 294

Iteration: 1
 Score =  162 bits (411), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 90/267 (33%), Positives = 139/267 (52%), Gaps = 11/267 (4%)
Query: 102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN 161
           L +++Y T CP+    ++  V+    +     A  LR+  HDCFV GCD SVL+   +  
Sbjct: 2   LSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNF 61
Query: 162 VAERDSDINL-SLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNV 220
             E+ +  N  S+ G  F+V+  IK+ +E  CPGVVSCADIL  + R+ VV  GG  +NV
Sbjct: 62  TGEKTAGPNANSIRG--FEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNV 119
Query: 221 SFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKEF 280
             GR+D   +  +    +LP     +  ++  F++KGF+ +E V L GAHTIG A C  F
Sbjct: 120 LLGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQAQCTAF 179
Query: 281 SDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFXXXXX 340
             R++        +  ++P YA++L+A C +   +  ++ F DV +P KFDN+Y+     
Sbjct: 180 RTRIYN-------ESNIDPTYAKSLQANCPSVGGDTNLSPF-DVTTPNKFDNAYYINLRN 231
Query: 341 XXXXXXVDNMLVKDPRTKPLVDQYASN 367
                  D  L     T   V  Y++N
Sbjct: 232 KKGLLHSDQQLFNGVSTDSQVTAYSNN 258

>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase. Length = 308

Iteration: 1
 Score =  159 bits (403), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 93/270 (34%), Positives = 138/270 (51%), Gaps = 4/270 (1%)
Query: 101 ALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAF 160
           +L A +Y  TCP+   +VR  V Q         A  +R+  HDCFV GCD S+L+ ++  
Sbjct: 3   SLNATFYAGTCPNASAMVRTIVQQAFQSDSRIGASLIRLHFHDCFVLGCDASILLDNSGS 62
Query: 161 NVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNV 220
            ++E+++  N +     F+VV  IK ALE+ACPGVVSC D+L  +++  V ++GGP + V
Sbjct: 63  IISEKNAGPNAN-SARGFNVVDNIKTALENACPGVVSCTDVLALASQASVSLSGGPSWTV 121
Query: 221 SFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKEF 280
             GR+D L +  A    ++P+    +  I   F++ G +  + VAL GAHT G A C  F
Sbjct: 122 DLGRRDTLTANQAGANSSIPSPTQGLSNITSKFSAVGLNTNDLVALSGAHTFGRATCGVF 181
Query: 281 SDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFXXXXX 340
           S+RLF F+     DP LN      L+  C    +    T   D+ +P  FDN+YF     
Sbjct: 182 SNRLFNFSGKGNPDPTLNTTLLSTLQELCPQKGRGSGSTNL-DLSTPDAFDNNYFTNLQS 240
Query: 341 XXXXXXVDNML--VKDPRTKPLVDQYASNE 368
                  D  L       T  +V  +ASN+
Sbjct: 241 NNGLLQSDQELFSTTGSATIAIVTSFASNQ 270

>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N Length = 300

Iteration: 1
 Score =  158 bits (400), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 102/275 (37%), Positives = 141/275 (51%), Gaps = 18/275 (6%)
Query: 102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN 161
           L  D Y  +CP+  +IVR+ V          AA  +R+  HDCFV+GCD S+L+      
Sbjct: 2   LSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDG---- 57
Query: 162 VAERDSDINLSLP----GDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPR 217
               DS+  L++P       F+V+  IK A+E+ACPGVVSCADILT + R+ VV++GGP 
Sbjct: 58  ---ADSE-KLAIPNINSARGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPG 113
Query: 218 FNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHC 277
           + V+ GRKDGLV+       NLP+    +D I+  F +   +I + VAL GAHT G A C
Sbjct: 114 WRVALGRKDGLVANQNS-ANNLPSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQAKC 172
Query: 278 KEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFXX 337
             FS+RLF F      D  L       L+  C     N  +TA  D  +   FDN+YF  
Sbjct: 173 AVFSNRLFNFTGAGNPDATLETSLLSNLQTVCP-LGGNSNITAPLDRSTTDTFDNNYFKN 231
Query: 338 XXXXXXXXXVDNMLVKDP----RTKPLVDQYASNE 368
                     D +L         TK LV+ Y+ ++
Sbjct: 232 LLEGKGLLSSDQILFSSDLAVNTTKKLVEAYSRSQ 266

>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid Length = 309

Iteration: 1
 Score =  153 bits (386), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 90/269 (33%), Positives = 133/269 (49%), Gaps = 6/269 (2%)
Query: 102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN 161
           L   +Y  +CP+   IVR+ +  +    P  AA  LR+  HDCFV+GCD S+L+ +    
Sbjct: 3   LTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSF 62
Query: 162 VAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVS 221
             E+D+  N +     F V+ ++K A+E ACP  VSCAD+LT + +  V +AGGP + V 
Sbjct: 63  RTEKDAFGNAN-SARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 121
Query: 222 FGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFS-IQEYVALMGAHTIGFAHCKEF 280
            GR+D L +       NLP    T+ ++   F + G +   + VAL G HT G   C+  
Sbjct: 122 LGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRSI 181
Query: 281 SDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFXXXXX 340
            DRL+ F+     DP LN  Y + L+  C  +     +  F D+ +P  FDN Y+     
Sbjct: 182 MDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDF-DLRTPTIFDNKYYVNLEE 240
Query: 341 XXXXXXVDNMLVKDPR---TKPLVDQYAS 366
                  D  L   P    T PLV  +A+
Sbjct: 241 QKGLIQSDQELFSSPNATDTIPLVRSFAN 269

>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y Length = 306

Iteration: 1
 Score =  152 bits (383), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 90/269 (33%), Positives = 133/269 (49%), Gaps = 6/269 (2%)
Query: 102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN 161
           L   +Y  +CP+   IVR+ +  +    P  AA  LR+  HDCFV+GCD S+L+ +    
Sbjct: 2   LTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSF 61
Query: 162 VAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVS 221
             E+D+  N +     F V+ ++K A+E ACP  VSCAD+LT + +  V +AGGP + V 
Sbjct: 62  RTEKDAFGNAN-SARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 120
Query: 222 FGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFS-IQEYVALMGAHTIGFAHCKEF 280
            GR+D L +       NLP    T+ ++   F + G +   + VAL G HT G   C+  
Sbjct: 121 LGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALYGGHTFGKNQCRFI 180
Query: 281 SDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFXXXXX 340
            DRL+ F+     DP LN  Y + L+  C  +     +  F D+ +P  FDN Y+     
Sbjct: 181 MDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDF-DLRTPTIFDNKYYVNLEE 239
Query: 341 XXXXXXVDNMLVKDPR---TKPLVDQYAS 366
                  D  L   P    T PLV  +A+
Sbjct: 240 QKGLIQSDQELFSSPNATDTIPLVRSFAN 268

>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln Length = 309

Iteration: 1
 Score =  152 bits (383), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 90/269 (33%), Positives = 133/269 (49%), Gaps = 6/269 (2%)
Query: 102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN 161
           L   +Y  +CP+   IVR+ +  +    P  AA  LR+  HDCFV+GCD S+L+ +    
Sbjct: 3   LTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSF 62
Query: 162 VAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVS 221
             E+D+  N +     F V+ ++K A+E ACP  VSCAD+LT + +  V +AGGP + V 
Sbjct: 63  RTEKDAFGNAN-SARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 121
Query: 222 FGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFS-IQEYVALMGAHTIGFAHCKEF 280
            GR+D L +       NLP    T+ ++   F + G +   + VAL G HT G   C+  
Sbjct: 122 LGRRDSLQAFLDLANANLPQPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFI 181
Query: 281 SDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFXXXXX 340
            DRL+ F+     DP LN  Y + L+  C  +     +  F D+ +P  FDN Y+     
Sbjct: 182 MDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDF-DLRTPTIFDNKYYVNLEE 240
Query: 341 XXXXXXVDNMLVKDPR---TKPLVDQYAS 366
                  D  L   P    T PLV  +A+
Sbjct: 241 QKGLIQSDQELFSSPNATDTIPLVRSFAN 269

>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With Benzhydroxamic Acid Length = 308

Iteration: 1
 Score =  152 bits (383), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 90/269 (33%), Positives = 133/269 (49%), Gaps = 6/269 (2%)
Query: 102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN 161
           L   +Y  +CP+   IVR+ +  +    P  AA  LR+  HDCFV+GCD S+L+ +    
Sbjct: 3   LTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSF 62
Query: 162 VAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVS 221
             E+D+  N +     F V+ ++K A+E ACP  VSCAD+LT + +  V +AGGP + V 
Sbjct: 63  RTEKDAFGNAN-SARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 121
Query: 222 FGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFS-IQEYVALMGAHTIGFAHCKEF 280
            GR+D L +       NLP    T+ ++   F + G +   + VAL G HT G   C+  
Sbjct: 122 LGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFI 181
Query: 281 SDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFXXXXX 340
            DRL+ F+     DP LN  Y + L+  C  +     +  F D+ +P  FDN Y+     
Sbjct: 182 MDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDF-DLRTPTIFDNKYYVNLEE 240
Query: 341 XXXXXXVDNMLVKDPR---TKPLVDQYAS 366
                  D  L   P    T PLV  +A+
Sbjct: 241 QKGLIQSDQELFSSPNATDTIPLVRSFAN 269

>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Length = 306

Iteration: 1
 Score =  151 bits (382), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 90/269 (33%), Positives = 133/269 (49%), Gaps = 6/269 (2%)
Query: 102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN 161
           L   +Y  +CP+   IVR+ +  +    P  AA  LR+  HDCFV+GCD S+L+ +    
Sbjct: 2   LTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSF 61
Query: 162 VAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVS 221
             E+D+  N +     F V+ ++K A+E ACP  VSCAD+LT + +  V +AGGP + V 
Sbjct: 62  RTEKDAFGNAN-SARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 120
Query: 222 FGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFS-IQEYVALMGAHTIGFAHCKEF 280
            GR+D L +       NLP    T+ ++   F + G +   + VAL G HT G   C+  
Sbjct: 121 LGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFI 180
Query: 281 SDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFXXXXX 340
            DRL+ F+     DP LN  Y + L+  C  +     +  F D+ +P  FDN Y+     
Sbjct: 181 MDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDF-DLRTPTIFDNKYYVNLEE 239
Query: 341 XXXXXXVDNMLVKDPR---TKPLVDQYAS 366
                  D  L   P    T PLV  +A+
Sbjct: 240 QKGLIQSDQELFSSPNATDTIPLVRSFAN 268

>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid Length = 308

Iteration: 1
 Score =  151 bits (382), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 90/269 (33%), Positives = 133/269 (49%), Gaps = 6/269 (2%)
Query: 102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN 161
           L   +Y  +CP+   IVR+ +  +    P  AA  LR+  HDCFV+GCD S+L+ +    
Sbjct: 2   LTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSF 61
Query: 162 VAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVS 221
             E+D+  N +     F V+ ++K A+E ACP  VSCAD+LT + +  V +AGGP + V 
Sbjct: 62  RTEKDAFGNAN-SARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 120
Query: 222 FGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFS-IQEYVALMGAHTIGFAHCKEF 280
            GR+D L +       NLP    T+ ++   F + G +   + VAL G HT G   C+  
Sbjct: 121 LGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFI 180
Query: 281 SDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFXXXXX 340
            DRL+ F+     DP LN  Y + L+  C  +     +  F D+ +P  FDN Y+     
Sbjct: 181 MDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDF-DLRTPTIFDNKYYVNLEE 239
Query: 341 XXXXXXVDNMLVKDPR---TKPLVDQYAS 366
                  D  L   P    T PLV  +A+
Sbjct: 240 QKGLIQSDQELFSSPNATDTIPLVRSFAN 268

>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate Length = 323

Iteration: 1
 Score =  151 bits (382), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 90/269 (33%), Positives = 133/269 (49%), Gaps = 6/269 (2%)
Query: 102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN 161
           L   +Y  +CP+   IVR+ +  +    P  AA  LR+  HDCFV+GCD S+L+ +    
Sbjct: 2   LTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSF 61
Query: 162 VAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVS 221
             E+D+  N +     F V+ ++K A+E ACP  VSCAD+LT + +  V +AGGP + V 
Sbjct: 62  RTEKDAFGNAN-SARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 120
Query: 222 FGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFS-IQEYVALMGAHTIGFAHCKEF 280
            GR+D L +       NLP    T+ ++   F + G +   + VAL G HT G   C+  
Sbjct: 121 LGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFI 180
Query: 281 SDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFXXXXX 340
            DRL+ F+     DP LN  Y + L+  C  +     +  F D+ +P  FDN Y+     
Sbjct: 181 MDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDF-DLRTPTIFDNKYYVNLEE 239
Query: 341 XXXXXXVDNMLVKDPR---TKPLVDQYAS 366
                  D  L   P    T PLV  +A+
Sbjct: 240 QKGLIQSDQELFSSPNATDTIPLVRSFAN 268

>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309

Iteration: 1
 Score =  151 bits (382), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 90/269 (33%), Positives = 133/269 (49%), Gaps = 6/269 (2%)
Query: 102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN 161
           L   +Y  +CP+   IVR+ +  +    P  AA  LR+  HDCFV+GCD S+L+ +    
Sbjct: 3   LTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSF 62
Query: 162 VAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVS 221
             E+D+  N +     F V+ ++K A+E ACP  VSCAD+LT + +  V +AGGP + V 
Sbjct: 63  RTEKDAFGNAN-SARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 121
Query: 222 FGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFS-IQEYVALMGAHTIGFAHCKEF 280
            GR+D L +       NLP    T+ ++   F + G +   + VAL G HT G   C+  
Sbjct: 122 LGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFI 181
Query: 281 SDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFXXXXX 340
            DRL+ F+     DP LN  Y + L+  C     N++     D+ +P  FDN Y+     
Sbjct: 182 MDRLYNFSNTGLPDPTLNTTYLQTLRGLCP-LNGNLSALVDMDLRTPTIFDNKYYVNLEE 240
Query: 341 XXXXXXVDNMLVKDPR---TKPLVDQYAS 366
                  D  L   P    T PLV  +A+
Sbjct: 241 QKGLIQSDQELFSSPNATDTIPLVRSFAN 269

>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly Length = 309

Iteration: 1
 Score =  151 bits (381), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 90/269 (33%), Positives = 133/269 (49%), Gaps = 6/269 (2%)
Query: 102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN 161
           L   +Y  +CP+   IVR+ +  +    P  AA  LR+  HDCFV+GCD S+L+ +    
Sbjct: 3   LTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSF 62
Query: 162 VAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVS 221
             E+D+  N +     F V+ ++K A+E ACP  VSCAD+LT + +  V +AGGP + V 
Sbjct: 63  RTEKDAFGNAN-SARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 121
Query: 222 FGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFS-IQEYVALMGAHTIGFAHCKEF 280
            GR+D L +       NLP    T+ ++   F + G +   + VAL G HT G   C+  
Sbjct: 122 LGRRDSLQAFLDLANANLPGPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFI 181
Query: 281 SDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFXXXXX 340
            DRL+ F+     DP LN  Y + L+  C  +     +  F D+ +P  FDN Y+     
Sbjct: 182 MDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDF-DLRTPTIFDNKYYVNLEE 240
Query: 341 XXXXXXVDNMLVKDPR---TKPLVDQYAS 366
                  D  L   P    T PLV  +A+
Sbjct: 241 QKGLIQSDQELFSSPNATDTIPLVRSFAN 269

>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid Length = 308

Iteration: 1
 Score =  150 bits (379), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 89/269 (33%), Positives = 133/269 (49%), Gaps = 6/269 (2%)
Query: 102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN 161
           L   +Y  +CP+   IVR+ +  +    P  AA  LR+  HDCFV+GCD S+L+ +    
Sbjct: 2   LTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSF 61
Query: 162 VAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVS 221
             E+D+  N +     F V+ ++K A+E ACP  VSCAD+LT + +  V +AGGP + V 
Sbjct: 62  RTEKDAFGNAN-SARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 120
Query: 222 FGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFS-IQEYVALMGAHTIGFAHCKEF 280
            GR+D L +       NLP    T+ ++   F + G +   + VAL G H+ G   C+  
Sbjct: 121 LGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHSFGKNQCRFI 180
Query: 281 SDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFXXXXX 340
            DRL+ F+     DP LN  Y + L+  C  +     +  F D+ +P  FDN Y+     
Sbjct: 181 MDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDF-DLRTPTIFDNKYYVNLEE 239
Query: 341 XXXXXXVDNMLVKDPR---TKPLVDQYAS 366
                  D  L   P    T PLV  +A+
Sbjct: 240 QKGLIQSDQELFSSPNATDTIPLVRSFAN 268

>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309

Iteration: 1
 Score =  148 bits (374), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 89/269 (33%), Positives = 132/269 (49%), Gaps = 6/269 (2%)
Query: 102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN 161
           L   +Y  +CP+   IVR+ +  +    P  AA  LR+   DCFV+GCD S+L+ +    
Sbjct: 3   LTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFEDCFVNGCDASILLDNTTSF 62
Query: 162 VAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVS 221
             E+D+  N +     F V+ ++K A+E ACP  VSCAD+LT + +  V +AGGP + V 
Sbjct: 63  RTEKDAFGNAN-SARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 121
Query: 222 FGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFS-IQEYVALMGAHTIGFAHCKEF 280
            GR+D L +       NLP    T+ ++   F + G +   + VAL G HT G   C+  
Sbjct: 122 LGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFI 181
Query: 281 SDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFXXXXX 340
            DRL+ F+     DP LN  Y + L+  C  +     +  F D+ +P  FDN Y+     
Sbjct: 182 MDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDF-DLRTPTIFDNKYYVNLEE 240
Query: 341 XXXXXXVDNMLVKDPR---TKPLVDQYAS 366
                  D  L   P    T PLV  +A+
Sbjct: 241 QKGLIQSDQELFSSPNATDTIPLVRSFAN 269

>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant Horseradish Peroxidase C (hrp C) Length = 308

Iteration: 1
 Score =  145 bits (367), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 131/269 (48%), Gaps = 6/269 (2%)
Query: 102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN 161
           L   +Y  +CP+   IVR+ +  +    P  AA  L +   DCFV+GCD S+L+ +    
Sbjct: 2   LTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILSLHFEDCFVNGCDASILLDNTTSF 61
Query: 162 VAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVS 221
             E+D+  N +     F V+ ++K A+E ACP  VSCAD+LT + +  V +AGGP + V 
Sbjct: 62  RTEKDAFGNAN-SARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 120
Query: 222 FGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFS-IQEYVALMGAHTIGFAHCKEF 280
            GR+D L +       NLP    T+ ++   F + G +   + VAL G HT G   C+  
Sbjct: 121 LGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFI 180
Query: 281 SDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFXXXXX 340
            DRL+ F+     DP LN  Y + L+  C  +     +  F D+ +P  FDN Y+     
Sbjct: 181 MDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDF-DLRTPTIFDNKYYVNLEE 239
Query: 341 XXXXXXVDNMLVKDPR---TKPLVDQYAS 366
                  D  L   P    T PLV  +A+
Sbjct: 240 QKGLIQSDQELFSSPNATDTIPLVRSFAN 268

>pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant Length = 261

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 103/274 (37%), Gaps = 56/274 (20%)
Query: 100 PALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNA 159
           P + ADY K      +K +R F+ +K+      A   LR+  H     G       +   
Sbjct: 17  PTVSADYQKA-VEKAKKKLRGFIAEKRC-----APLMLRLAWHSA---GTFDKGTKTGGP 67
Query: 160 FNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFN 219
           F   +  +++  S   +  D+ +++   L+   P ++S AD    +    V + GGP   
Sbjct: 68  FGTIKHPAELAHSA-NNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVP 125
Query: 220 VSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFA-SKGFSIQEYVALMGAHTIGFAHCK 278
              GR+D          G LP      D +  +F  + G + Q+ VAL G HTIG AH  
Sbjct: 126 FHPGRED---KPEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAH-- 180
Query: 279 EFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFXXX 338
                                K A   +    +              +P  FDNSYF   
Sbjct: 181 ---------------------KEASGFEGPWTS--------------NPLIFDNSYFTEL 205
Query: 339 XXXXXXXXV----DNMLVKDPRTKPLVDQYASNE 368
                   +    D  L+ DP  +PLVD+YA++E
Sbjct: 206 LSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADE 239

>pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With Ascorbate Length = 261

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 103/274 (37%), Gaps = 56/274 (20%)
Query: 100 PALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNA 159
           P + ADY K      +K +R F+ +K+      A   LR+  H     G       +   
Sbjct: 17  PTVSADYQKA-VEKAKKKLRGFIAEKRC-----APLMLRLAWHSA---GTFDKGTKTGGP 67
Query: 160 FNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFN 219
           F   +  +++  S   +  D+ +++   L+   P ++S AD    +    V + GGP   
Sbjct: 68  FGTIKHPAELAHSA-NNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVP 125
Query: 220 VSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFA-SKGFSIQEYVALMGAHTIGFAHCK 278
              GR+D          G LP      D +  +F  + G + Q+ VAL G HTIG AH K
Sbjct: 126 FHPGRED---KPEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAH-K 181
Query: 279 EFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFXXX 338
           E S     +  N                                    P  FDNSYF   
Sbjct: 182 ERSGFEGPWTSN------------------------------------PLIFDNSYFTEL 205
Query: 339 XXXXXXXXV----DNMLVKDPRTKPLVDQYASNE 368
                   +    D  L+ DP  +PLVD+YA++E
Sbjct: 206 LSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADE 239

>pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii Length = 249

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 103/274 (37%), Gaps = 56/274 (20%)
Query: 100 PALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNA 159
           P + ADY K      +K +R F+ +K+      A   LR+  H     G       +   
Sbjct: 5   PTVSADYQKA-VEKAKKKLRGFIAEKRC-----APLMLRLAWHSA---GTFDKGTKTGGP 55
Query: 160 FNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFN 219
           F   +  +++  S   +  D+ +++   L+   P ++S AD    +    V + GGP   
Sbjct: 56  FGTIKHPAELAHSA-NNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVP 113
Query: 220 VSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFA-SKGFSIQEYVALMGAHTIGFAHCK 278
              GR+D          G LP      D +  +F  + G + Q+ VAL G HTIG AH K
Sbjct: 114 FHPGRED---KPEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAH-K 169
Query: 279 EFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFXXX 338
           E S     +  N                                    P  FDNSYF   
Sbjct: 170 ERSGFEGPWTSN------------------------------------PLIFDNSYFTEL 193
Query: 339 XXXXXXXXV----DNMLVKDPRTKPLVDQYASNE 368
                   +    D  L+ DP  +PLVD+YA++E
Sbjct: 194 LSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADE 227

>pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Length = 264

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 103/274 (37%), Gaps = 56/274 (20%)
Query: 100 PALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNA 159
           P + ADY K      +K +R F+ +K+      A   LR+  H     G       +   
Sbjct: 17  PTVSADYQKA-VEKAKKKLRGFIAEKRC-----APLMLRLAWHSA---GTFDKGTKTGGP 67
Query: 160 FNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFN 219
           F   +  +++  S   +  D+ +++   L+   P ++S AD    +    V + GGP   
Sbjct: 68  FGTIKHPAELAHSA-NNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVP 125
Query: 220 VSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFA-SKGFSIQEYVALMGAHTIGFAHCK 278
              GR+D          G LP      D +  +F  + G + Q+ VAL G HTIG AH K
Sbjct: 126 FHPGRED---KPEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAH-K 181
Query: 279 EFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFXXX 338
           E S     +  N                                    P  FDNSYF   
Sbjct: 182 ERSGFEGPWTSN------------------------------------PLIFDNSYFTEL 205
Query: 339 XXXXXXXXV----DNMLVKDPRTKPLVDQYASNE 368
                   +    D  L+ DP  +PLVD+YA++E
Sbjct: 206 LSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADE 239

>pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Mutant C197t Length = 271

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
Query: 177 AFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIP 236
             D+  K    L+   P  +S AD+   +    +   GGP     +GR D          
Sbjct: 68  GLDIPRKALETLKKKYP-QISYADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGSVCGPD 126
Query: 237 GNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKEFS 281
           G LP  + T   + ++F   GF+ QE VAL+GAHT G  H  EFS
Sbjct: 127 GRLPDGSKTQSHVREVFRRLGFNDQETVALIGAHTCGETHI-EFS 170

>pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase Length = 249

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 102/274 (37%), Gaps = 62/274 (22%)
Query: 107 YKTTCPDFEKIV-------REFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNA 159
           Y T  PD++K +       R F+ +K+      A   LR+  H     G   S   +   
Sbjct: 4   YPTVSPDYQKAIEKAKRKLRGFIAEKKC-----APLILRLAWHSA---GTFDSKTKTGGP 55
Query: 160 FNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFN 219
           F   +  +++      +  D+ +++   +++  P +VS AD    +    V + GGP   
Sbjct: 56  FGTIKHQAELAHGA-NNGLDIAVRLLEPIKEQFP-IVSYADFYQLAGVVAVEITGGPEVP 113
Query: 220 VSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFA-SKGFSIQEYVALMGAHTIGFAHCK 278
              GR+D          G LP      D +  +F  + G S Q+ VAL G HTIG AH K
Sbjct: 114 FHPGRED---KPEPPPEGRLPDATKGSDHLRDVFGKAMGLSDQDIVALSGGHTIGAAH-K 169
Query: 279 EFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFXXX 338
           E S     +  N                                    P  FDNSYF   
Sbjct: 170 ERSGFEGPWTSN------------------------------------PLIFDNSYFTEL 193
Query: 339 XXXXXXXXV----DNMLVKDPRTKPLVDQYASNE 368
                   +    D  L+ D   +PLV++YA++E
Sbjct: 194 LTGEKDGLLQLPSDKALLTDSVFRPLVEKYAADE 227

>pdb|4GED|A Chain A, Crystal Structure Of The Leishmania Major Peroxidase-Cytochrome C Complex Length = 268

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
Query: 177 AFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIP 236
             D+  K    L+   P  +S AD+   +    +   GGP     +GR D          
Sbjct: 67  GLDIPRKALETLKKKYP-QISYADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGSVCGPD 125
Query: 237 GNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKEFS 281
           G LP  + T   + ++F   GF+ QE VAL+GAHT G  H  EFS
Sbjct: 126 GRLPDGSKTQSHVREVFRRLGFNDQETVALIGAHTCGECHI-EFS 169

>pdb|3RIV|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Length = 271

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
Query: 177 AFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIP 236
             D+  K    L+   P  +S AD+   +    +   GGP     +GR D          
Sbjct: 68  GLDIPRKALETLKKKYP-QISYADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGSVCGPD 126
Query: 237 GNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKEFS 281
           G LP  + T   + ++F   GF+ QE VAL+GAHT G  H  EFS
Sbjct: 127 GRLPDGSKTQSHVREVFRRLGFNDQETVALIGAHTCGECHI-EFS 170

>pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme Peroxidase Length = 261

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 103/274 (37%), Gaps = 56/274 (20%)
Query: 100 PALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNA 159
           P + ADY K      +K +R F+ +K+      A   LR+  H     G       +   
Sbjct: 17  PTVSADYQKA-VEKAKKKLRGFIAEKRC-----APLMLRLAAHSA---GTFDKGTKTGGP 67
Query: 160 FNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFN 219
           F   +  +++  S   +  D+ +++   L+   P ++S AD    +    V + GGP   
Sbjct: 68  FGTIKHPAELAHSA-NNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVP 125
Query: 220 VSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFA-SKGFSIQEYVALMGAHTIGFAHCK 278
              GR+D          G LP      D +  +F  + G + Q+ VAL G HTIG AH K
Sbjct: 126 FHPGRED---KPEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAH-K 181
Query: 279 EFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFXXX 338
           E S     +  N                                    P  FDNSYF   
Sbjct: 182 ERSGFEGPWTSN------------------------------------PLIFDNSYFTEL 205
Query: 339 XXXXXXXXV----DNMLVKDPRTKPLVDQYASNE 368
                   +    D  L+ DP  +PLVD+YA++E
Sbjct: 206 LSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADE 239

>pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant Length = 249

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 103/274 (37%), Gaps = 56/274 (20%)
Query: 100 PALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNA 159
           P + ADY K      +K +R F+ +K+      A   L++  H     G       +   
Sbjct: 5   PTVSADYQKA-VEKAKKKLRGFIAEKRC-----APLMLKLAWHSA---GTFDKGTKTGGP 55
Query: 160 FNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFN 219
           F   +  +++  S   +  D+ +++   L+   P ++S AD    +    V + GGP   
Sbjct: 56  FGTIKHPAELAHSA-NNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVP 113
Query: 220 VSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFA-SKGFSIQEYVALMGAHTIGFAHCK 278
              GR+D          G LP      D +  +F  + G + Q+ VAL G HTIG AH K
Sbjct: 114 FHPGRED---KPEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAH-K 169
Query: 279 EFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFXXX 338
           E S     +  N                                    P  FDNSYF   
Sbjct: 170 ERSGFEGPWTSN------------------------------------PLIFDNSYFTEL 193
Query: 339 XXXXXXXXV----DNMLVKDPRTKPLVDQYASNE 368
                   +    D  L+ DP  +PLVD+YA++E
Sbjct: 194 LSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADE 227

>pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant Length = 249

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 75/198 (37%), Gaps = 46/198 (23%)
Query: 176 DAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARI 235
           +  D+ +++   L+   P ++S AD    +    V + GGP      GR+D         
Sbjct: 71  NGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPFHPGRED---KPEPPP 126
Query: 236 PGNLPTNNMTMDEILKMFA-SKGFSIQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTD 294
            G LP      D +  +F  + G + Q+ VAL G HTIG AH KE S     +  N    
Sbjct: 127 EGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAH-KERSGFEGPWTSN---- 181
Query: 295 PELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFXXXXXXXXXXXV----DNM 350
                                           P  FDNSYF           +    D  
Sbjct: 182 --------------------------------PLIFDNSYFTELLSGEKEGLLQLPSDKA 209
Query: 351 LVKDPRTKPLVDQYASNE 368
           L+ DP  +PLVD+YA++E
Sbjct: 210 LLSDPVFRPLVDKYAADE 227

>pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Mutant H42a Length = 261

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 75/198 (37%), Gaps = 46/198 (23%)
Query: 176 DAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARI 235
           +  D+ +++   L+   P ++S AD    +    V + GGP      GR+D         
Sbjct: 83  NGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPFHPGRED---KPEPPP 138
Query: 236 PGNLPTNNMTMDEILKMFA-SKGFSIQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTD 294
            G LP      D +  +F  + G + Q+ VAL G HTIG AH KE S     +  N    
Sbjct: 139 EGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAH-KERSGFEGPWTSN---- 193
Query: 295 PELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFXXXXXXXXXXXV----DNM 350
                                           P  FDNSYF           +    D  
Sbjct: 194 --------------------------------PLIFDNSYFTELLSGEKEGLLQLPSDKA 221
Query: 351 LVKDPRTKPLVDQYASNE 368
           L+ DP  +PLVD+YA++E
Sbjct: 222 LLSDPVFRPLVDKYAADE 239

>pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant Length = 261

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 75/198 (37%), Gaps = 46/198 (23%)
Query: 176 DAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARI 235
           +  D+ +++   L+   P ++S AD    +    V + GGP      GR+D         
Sbjct: 83  NGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPFHPGRED---KPEPPP 138
Query: 236 PGNLPTNNMTMDEILKMFA-SKGFSIQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTD 294
            G LP      D +  +F  + G + Q+ VAL G HTIG AH KE S     +  N    
Sbjct: 139 EGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAH-KERSGFEGPWTSN---- 193
Query: 295 PELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFXXXXXXXXXXXV----DNM 350
                                           P  FDNSYF           +    D  
Sbjct: 194 --------------------------------PLIFDNSYFTELLSGEKEGLLQLPSDKA 221
Query: 351 LVKDPRTKPLVDQYASNE 368
           L+ DP  +PLVD+YA++E
Sbjct: 222 LLSDPVFRPLVDKYAADE 239

>pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant Length = 261

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 75/198 (37%), Gaps = 46/198 (23%)
Query: 176 DAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARI 235
           +  D+ +++   L+   P ++S AD    +    V + GGP      GR+D         
Sbjct: 83  NGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPFHPGRED---KPEPPP 138
Query: 236 PGNLPTNNMTMDEILKMFA-SKGFSIQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTD 294
            G LP      D +  +F  + G + Q+ VAL G HTIG AH KE S     +  N    
Sbjct: 139 EGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAH-KERSGFEGPWTSN---- 193
Query: 295 PELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFXXXXXXXXXXXV----DNM 350
                                           P  FDNSYF           +    D  
Sbjct: 194 --------------------------------PLIFDNSYFTELLSGEKEGLLQLPSDKA 221
Query: 351 LVKDPRTKPLVDQYASNE 368
           L+ DP  +PLVD+YA++E
Sbjct: 222 LLSDPVFRPLVDKYAADE 239

>pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant Length = 249

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 75/198 (37%), Gaps = 46/198 (23%)
Query: 176 DAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARI 235
           +  D+ +++   L+   P ++S AD    +    V + GGP      GR+D         
Sbjct: 71  NGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPFHPGRED---KPEPPP 126
Query: 236 PGNLPTNNMTMDEILKMFA-SKGFSIQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTD 294
            G LP      D +  +F  + G + Q+ VAL G HTIG AH KE S     +  N    
Sbjct: 127 EGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAH-KERSGFEGPWTSN---- 181
Query: 295 PELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFXXXXXXXXXXXV----DNM 350
                                           P  FDNSYF           +    D  
Sbjct: 182 --------------------------------PLIFDNSYFTELLSGEKEGLLQLPSDKA 209
Query: 351 LVKDPRTKPLVDQYASNE 368
           L+ DP  +PLVD+YA++E
Sbjct: 210 LLSDPVFRPLVDKYAADE 227

>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase From Tobacco Plants And Structural Insights For Its Instability Length = 295

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 72/182 (39%), Gaps = 35/182 (19%)
Query: 196 VSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIP--GNLPTNN--MTMDEILK 251
           V+ AD+   ++   +  AGGP+  + +GR D  V++  + P  G LP          +  
Sbjct: 87  VTYADLFQLASATAIEEAGGPKIPMKYGRVD--VTEPEQCPEEGRLPDAGPPSPAQHLRD 144
Query: 252 MFASKGFSIQEYVALMGAHTIGFAHCKE--FSDRLFKFAPNQPTDPELNPKYAEALKAAC 309
           +F   G + +E VAL GAHT+G +      +     K+  + P  P      A+ L    
Sbjct: 145 VFYRMGLNDKEIVALSGAHTLGRSRPDRSGWGKPETKYTKDGPGAPGGQSWTAQWL---- 200
Query: 310 KNHEQNITMTAFNDVMSPGKFDNSYFXXXXXXXXXXXV----DNMLVKDPRTKPLVDQYA 365
                              KFDNSYF           +    D  L +DP  K   ++YA
Sbjct: 201 -------------------KFDNSYFKDIKERRDEDLLVLPTDAALFEDPSFKVYAEKYA 241
Query: 366 SN 367
           ++
Sbjct: 242 AD 243

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	368
3hdl_A	304	Royal PALM TREE peroxidase; glycosylated, oxidored	1e-119
1bgp_A	309	Barley grain peroxidase; chromoprotein, oxidoreduc	1e-116
1fhf_A	304	SEED coat peroxidase; oxidoreductase; HET: HEM; 2.	1e-114
1pa2_A	306	Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45	1e-113
1gwu_A	309	Peroxidase C1A; oxidoreductase, glycoprotein, heme	1e-112
1sch_A	294	PNP, peanut peroxidase, major cationic isozyme; ca	1e-112
1qgj_A	300	Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A	1e-110
1iyn_A	295	Chloroplastic ascorbate peroxidase; hydrogen perox	2e-50
2vcn_A	261	Ascorbate peroxidase; INH, APX, isoniazid, oxidore	3e-49
3m5q_A	357	Manganese peroxidase 1; heme, Mn(II)-binding site,	7e-49
3fmu_A	331	VersatIle peroxidase VPL2; class II (fungal) perox	9e-43
3q3u_A	338	Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A	2e-40
2e39_A	344	Peroxidase; heme protein, coordination geometry of	2e-37
1llp_A	343	LIP4.15, lignin peroxidase; heme protein, glyco pr	9e-37
3riv_A	271	Ascorbate peroxidase; alpha helical bundle, heme p	6e-20
3e2o_A	294	CCP, cytochrome C peroxidase; cytochrome C peroxid	3e-12
1eys_C	382	Photosynthetic reaction center; membrane protein c	5e-08
1eys_C	382	Photosynthetic reaction center; membrane protein c	1e-06
1eys_C	382	Photosynthetic reaction center; membrane protein c	3e-04
3h0g_A	1752	DNA-directed RNA polymerase II subunit RPB1; trans	2e-07
3h0g_A	1752	DNA-directed RNA polymerase II subunit RPB1; trans	2e-06
3h0g_A	1752	DNA-directed RNA polymerase II subunit RPB1; trans	1e-05
3h0g_A	1752	DNA-directed RNA polymerase II subunit RPB1; trans	2e-05
1twf_A	1733	B220, DNA-directed RNA polymerase II largest subun	2e-06
1twf_A	1733	B220, DNA-directed RNA polymerase II largest subun	1e-05
1twf_A	1733	B220, DNA-directed RNA polymerase II largest subun	2e-05
1twf_A	1733	B220, DNA-directed RNA polymerase II largest subun	1e-04
1twf_A	1733	B220, DNA-directed RNA polymerase II largest subun	2e-04
1twf_A	1733	B220, DNA-directed RNA polymerase II largest subun	3e-04
1twf_A	1733	B220, DNA-directed RNA polymerase II largest subun	5e-04
1twf_A	1733	B220, DNA-directed RNA polymerase II largest subun	6e-04
3v1v_A	433	2-MIB synthase, 2-methylisoborneol synthase; class	3e-05
3v1v_A	433	2-MIB synthase, 2-methylisoborneol synthase; class	1e-04
3ghp_A	227	Cellulosomal scaffoldin adaptor protein B; linker	5e-05
3nwa_A	703	GB, GB-1, GB1, envelope glycoprotein B; coiled-coi	5e-05
3nwa_A	703	GB, GB-1, GB1, envelope glycoprotein B; coiled-coi	5e-04
2hye_C	759	Cullin-4A, CUL-4A; beta propeller, ring finger, zi	1e-04
3a58_A	320	Exocyst complex component SEC3; protein complex, P	1e-04
3a58_A	320	Exocyst complex component SEC3; protein complex, P	6e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04
2grx_C	229	Protein TONB; beta barrel, outer membrane, heteroc	3e-04
3gdb_A	937	Endo-D, putative uncharacterized protein SPR0440;	4e-04
3oun_A	157	Putative uncharacterized protein TB39.8; peptidogl	5e-04
3oun_A	157	Putative uncharacterized protein TB39.8; peptidogl	8e-04

>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} Length = 304

 Score =  347 bits (892), Expect = e-119
 Identities = 103/269 (38%), Positives = 146/269 (54%), Gaps = 4/269 (1%)

Query: 102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN 161
           L+  +Y T+CP  E +V++ V      +   A G +R+  HDCFV GCD SVL+ S A N
Sbjct: 2   LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANN 61

Query: 162 VAERDSDIN-LSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNV 220
            AE+D+  N  SL G  F+V+   K+A+E ACP  VSCADIL  + R+   +AG   + V
Sbjct: 62  TAEKDAIPNNPSLRG--FEVITAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQV 119

Query: 221 SFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKEF 280
             GR+DG VS A+     +P+      +++  FA+K  +  E V L GAH+IG AHC  F
Sbjct: 120 PSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADEMVTLSGAHSIGVAHCSSF 179

Query: 281 SDRLFKFAPNQPTDPELNPKYAEALKAAC-KNHEQNITMTAFNDVMSPGKFDNSYFRGLP 339
           ++RL+ F      DP L+P YA  L+  C  N  +   +T   D+++P   DN Y+ G+ 
Sbjct: 180 TNRLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDIITPSVLDNMYYTGVQ 239

Query: 340 RGLGLLRVDNMLVKDPRTKPLVDQYASNE 368
             LGLL  D  LV +      V   A N 
Sbjct: 240 LTLGLLTSDQALVTEANLSAAVKANAMNL 268

>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Length = 309

 Score =  339 bits (872), Expect = e-116
 Identities = 102/275 (37%), Positives = 144/275 (52%), Gaps = 9/275 (3%)

Query: 96  PSAKPALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLI 155
           P   P L  D+Y  TCP  E IVREFV +   +    AAG LR+  HDCFV GCD SVL+
Sbjct: 3   PPVAPGLSFDFYWQTCPRAESIVREFVQEAVRKDIGLAAGLLRLHFHDCFVQGCDASVLL 62

Query: 156 SSNAFNVAERDSDINLSLPGDAFDVVIKIKNALEDACPG-VVSCADILTASTRNLVVMAG 214
             +A    E+ +  NL+L   AF  V  I++ LE  C G VVSC+DIL  + R+ VV++G
Sbjct: 63  DGSATGPGEQQAPPNLTLRPSAFKAVNDIRDRLERECRGAVVSCSDILALAARDSVVVSG 122

Query: 215 GPRFNVSFGRKDGL-VSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIG 273
           GP + V  GR+D    +    +  +LP  +  +  +L +    G    + V + G HTIG
Sbjct: 123 GPDYRVPLGRRDSRSFASTQDVLSDLPGPSSNVQSLLALLGRLGLDATDLVTISGGHTIG 182

Query: 274 FAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNS 333
            AHC  F DRLF     +P DP ++P +   LK  C    +        DV +P  FDN 
Sbjct: 183 LAHCSSFEDRLF----PRP-DPTISPTFLSRLKRTCPA--KGTDRRTVLDVRTPNVFDNK 235

Query: 334 YFRGLPRGLGLLRVDNMLVKDPRTKPLVDQYASNE 368
           Y+  L    GL   D  L  +  T+P+V+++A ++
Sbjct: 236 YYIDLVNREGLFVSDQDLFTNAITRPIVERFAQSQ 270

>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Length = 304

 Score =  333 bits (856), Expect = e-114
 Identities = 95/269 (35%), Positives = 139/269 (51%), Gaps = 4/269 (1%)

Query: 102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN 161
           L   +Y+ TCP+   IV   +       P   A  +R+  HDCFV GCDGSVL+++    
Sbjct: 2   LTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTI 61

Query: 162 VAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVS 221
            +E+D+  N++      DVV  IK A+E++CP  VSCADIL  +     V+ GGP + V 
Sbjct: 62  ESEQDALPNIN-SIRGLDVVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVP 120

Query: 222 FGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKEFS 281
            GR+D L +       NLP     + ++   FA +G +  + V L G HT G A C  F 
Sbjct: 121 LGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTLDLVTLSGGHTFGRARCSTFI 180

Query: 282 DRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLPRG 341
           +RL+ F+     DP LN  Y E L+A C  +          D+ +P +FDN Y+  L + 
Sbjct: 181 NRLYNFSNTGNPDPTLNTTYLEVLRARCPQN-ATGDNLTNLDLSTPDQFDNRYYSNLLQL 239

Query: 342 LGLLRVDNMLVKDP--RTKPLVDQYASNE 368
            GLL+ D  L   P   T P+V+ ++SN+
Sbjct: 240 NGLLQSDQELFSTPGADTIPIVNSFSSNQ 268

>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Length = 306

 Score =  332 bits (853), Expect = e-113
 Identities = 96/269 (35%), Positives = 142/269 (52%), Gaps = 4/269 (1%)

Query: 102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN 161
           L A +Y  TCP+   IVR  + Q         A  +R+  HDCFV+GCD S+L+      
Sbjct: 3   LNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTGSI 62

Query: 162 VAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVS 221
            +E+++  N++     F+VV  IK ALE+ACPGVVSC+D+L  ++   V +AGGP + V 
Sbjct: 63  QSEKNAGPNVNSA-RGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVL 121

Query: 222 FGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKEFS 281
            GR+D L +  A    ++P+   ++  I   F++ G +  + VAL GAHT G A C  F+
Sbjct: 122 LGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGRARCGVFN 181

Query: 282 DRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLPRG 341
           +RLF F+     DP LN      L+  C     + +     D+ +P  FDN+YF  L   
Sbjct: 182 NRLFNFSGTGNPDPTLNSTLLSTLQQLCPQ-NGSASTITNLDLSTPDAFDNNYFANLQSN 240

Query: 342 LGLLRVDNMLVKD--PRTKPLVDQYASNE 368
            GLL+ D  L       T  +V  +ASN+
Sbjct: 241 DGLLQSDQELFSTTGSSTIAIVTSFASNQ 269

>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Length = 309

 Score =  327 bits (842), Expect = e-112
 Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 6/271 (2%)

Query: 102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN 161
           L   +Y  +CP+   IVR+ +  +    P  AA  LR+  HDCFV+GCD S+L+ +    
Sbjct: 3   LTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSF 62

Query: 162 VAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVS 221
             E+D+  N +     F V+ ++K A+E ACP  VSCAD+LT + +  V +AGGP + V 
Sbjct: 63  RTEKDAFGNANSA-RGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 121

Query: 222 FGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFS-IQEYVALMGAHTIGFAHCKEF 280
            GR+D L +       NLP    T+ ++   F + G +   + VAL G HT G   C+  
Sbjct: 122 LGRRDSLQAFLDLANANLPGPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFI 181

Query: 281 SDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLPR 340
            DRL+ F+     DP LN  Y + L+  C  +  N++     D+ +P  FDN Y+  L  
Sbjct: 182 MDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLN-GNLSALVDFDLRTPTIFDNKYYVNLEE 240

Query: 341 GLGLLRVDNMLVKDPR---TKPLVDQYASNE 368
             GL++ D  L   P    T PLV  +A++ 
Sbjct: 241 QKGLIQSDQELFSSPNATDTIPLVRSFANST 271

>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Length = 294

 Score =  327 bits (840), Expect = e-112
 Identities = 94/268 (35%), Positives = 143/268 (53%), Gaps = 11/268 (4%)

Query: 102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN 161
           L +++Y T CP+    ++  V+    +     A  LR+  HDCFV GCD SVL+   +  
Sbjct: 2   LSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNF 61

Query: 162 VAERDSDINL-SLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNV 220
             E+ +  N  S+ G  F+V+  IK+ +E  CPGVVSCADIL  + R+ VV  GG  +NV
Sbjct: 62  TGEKTAGPNANSIRG--FEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNV 119

Query: 221 SFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKEF 280
             GR+D   +  +    +LP     +  ++  F++KGF+ +E V L GAHTIG A C  F
Sbjct: 120 LLGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQAQCTAF 179

Query: 281 SDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLPR 340
             R++        +  ++P YA++L+A C +   +  ++ F DV +P KFDN+Y+  L  
Sbjct: 180 RTRIY-------NESNIDPTYAKSLQANCPSVGGDTNLSPF-DVTTPNKFDNAYYINLRN 231

Query: 341 GLGLLRVDNMLVKDPRTKPLVDQYASNE 368
             GLL  D  L     T   V  Y++N 
Sbjct: 232 KKGLLHSDQQLFNGVSTDSQVTAYSNNA 259

>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Length = 300

 Score =  323 bits (830), Expect = e-110
 Identities = 105/271 (38%), Positives = 147/271 (54%), Gaps = 10/271 (3%)

Query: 102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN 161
           L  D Y  +CP+  +IVR+ V          AA  +R+  HDCFV+GCD S+L+      
Sbjct: 2   LSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGAD-- 59

Query: 162 VAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVS 221
            +E+ +  N++     F+V+  IK A+E+ACPGVVSCADILT + R+ VV++GGP + V+
Sbjct: 60  -SEKLAIPNINSA-RGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVA 117

Query: 222 FGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKEFS 281
            GRKDGLV+       NLP+    +D I+  F +   +I + VAL GAHT G A C  FS
Sbjct: 118 LGRKDGLVANQNS-ANNLPSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQAKCAVFS 176

Query: 282 DRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLPRG 341
           +RLF F      D  L       L+  C     N  +TA  D  +   FDN+YF+ L  G
Sbjct: 177 NRLFNFTGAGNPDATLETSLLSNLQTVCPLG-GNSNITAPLDRSTTDTFDNNYFKNLLEG 235

Query: 342 LGLLRVDNMLVKDP----RTKPLVDQYASNE 368
            GLL  D +L         TK LV+ Y+ ++
Sbjct: 236 KGLLSSDQILFSSDLAVNTTKKLVEAYSRSQ 266

>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Length = 295

 Score =  169 bits (431), Expect = 2e-50
 Identities = 56/276 (20%), Positives = 93/276 (33%), Gaps = 43/276 (15%)

Query: 104 ADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN-- 161
           A           + ++E +     ++       +R+  HD      +          N  
Sbjct: 1   AASDSAQLKSAREDIKELL-----KTKFCHPIMVRLGWHDAGTYNKNIEEWPQRGGANGS 55

Query: 162 ---VAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRF 218
                E     N  L  +A +++  IK          V+ AD+   ++   +  AGGP+ 
Sbjct: 56  LRFDVELKHGANAGL-VNALNLLKPIK-----DKYSGVTYADLFQLASATAIEEAGGPKI 109

Query: 219 NVSFGRKDGLVSQAARIPGNLP--TNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAH 276
            + +GR D    +     G LP          +  +F   G + +E VAL GAHT+G + 
Sbjct: 110 PMKYGRVDVTEPEQCPEEGRLPDAGPPSPAQHLRDVFYRMGLNDKEIVALSGAHTLGRSR 169

Query: 277 CKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFR 336
                            D     K                + TA        KFDNSYF+
Sbjct: 170 P----------------DRSGWGKPETKYTKDGPGAPGGQSWTA-----QWLKFDNSYFK 208

Query: 337 GLP----RGLGLLRVDNMLVKDPRTKPLVDQYASNE 368
            +       L +L  D  L +DP  K   ++YA++ 
Sbjct: 209 DIKERRDEDLLVLPTDAALFEDPSFKVYAEKYAADP 244

>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Length = 261

 Score =  165 bits (420), Expect = 3e-49
 Identities = 63/285 (22%), Positives = 93/285 (32%), Gaps = 60/285 (21%)

Query: 97  SAKPALRADYYKTTCPDFEKIVREFVH------QKQTQSPSTAAGALRVFMHDC--FVDG 148
                        + P      ++ V       +        A   LR+  H    F  G
Sbjct: 2   RGSHHHHHHGSGKSYPTVSADYQKAVEKAKKKLRGFIAEKRCAPLMLRLAAHSAGTFDKG 61

Query: 149 CDGSVLISSNAFNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRN 208
                   +   + AE     N     +  D+ +++   L+   P ++S AD    +   
Sbjct: 62  TKTGGPFGT-IKHPAELAHSAN-----NGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVV 114

Query: 209 LVVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFA-SKGFSIQEYVALM 267
            V + GGP      GR+D          G LP      D +  +F  + G + Q+ VAL 
Sbjct: 115 AVEVTGGPEVPFHPGREDKPEPPP---EGRLPDATKGSDHLRDVFGKAMGLTDQDIVALS 171

Query: 268 GAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSP 327
           G HTIG AH +                                               +P
Sbjct: 172 GGHTIGAAHKERSGF-------------------------------------EGPWTSNP 194

Query: 328 GKFDNSYFRGL----PRGLGLLRVDNMLVKDPRTKPLVDQYASNE 368
             FDNSYF  L      GL  L  D  L+ DP  +PLVD+YA++E
Sbjct: 195 LIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADE 239

>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Length = 357

 Score =  167 bits (424), Expect = 7e-49
 Identities = 56/272 (20%), Positives = 98/272 (36%), Gaps = 35/272 (12%)

Query: 110 TCPDFEKIVREFVHQ-KQTQSPSTAAGALRVFMHDCFV----------DGCDGSVLISSN 158
            C  F  + ++      Q +    A   +R+  HD              G DGS+L+   
Sbjct: 13  ACCAFIPLAQDLQETIFQNECGEDAHEVIRLTFHDAIAISRSQGPKAGGGADGSMLL--- 69

Query: 159 AFNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILT-ASTRNLVVMAGGPR 217
            F   E +   N  +  D+ + +I             +S AD++  A    L    G PR
Sbjct: 70  -FPTVEPNFSANNGID-DSVNNLIPFM-----QKHNTISAADLVQFAGAVALSNCPGAPR 122

Query: 218 FNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFA-SKGFSIQEYVALMGAHTIGFAH 276
                GR +      A + G +P    ++ +IL+ F  + GF+  E V+L+ +H++  A 
Sbjct: 123 LEFLAGRPNKT---IAAVDGLIPEPQDSVTKILQRFEDAGGFTPFEVVSLLASHSVARAD 179

Query: 277 CKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFR 336
                D+    AP   T    + +    +    K      +     +V SP    +    
Sbjct: 180 K---VDQTIDAAPFDSTPFTFDTQVFLEV--LLKGVGFPGSANNTGEVASPLPLGSGSDT 234

Query: 337 GLPRGLGLLRVDNMLVKDPRTKPLVDQYASNE 368
           G       L+ D  L  DPRT  +   + + +
Sbjct: 235 GE----MRLQSDFALAHDPRTACIWQGFVNEQ 262

>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* Length = 331

 Score =  150 bits (381), Expect = 9e-43
 Identities = 55/281 (19%), Positives = 90/281 (32%), Gaps = 53/281 (18%)

Query: 110 TCPDFEKIVREFVHQ-------------KQTQSPSTAAGALRVFMHDCFV-------DGC 149
           TC D                           Q       +LR+  HD           G 
Sbjct: 2   TCDDGRTTANAACCILFPILDDIQENLFDGAQCGEEVHESLRLTFHDAIGFSPTLGGGGA 61

Query: 150 DGSVLISSNAFNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNL 209
           DGS++     F+  E +   N  +     D ++  +          +S  D +  +    
Sbjct: 62  DGSIIA----FDTIETNFPANAGI-----DEIVSAQKPF--VAKHNISAGDFIQFAGAVG 110

Query: 210 VV-MAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMG 268
           V    GG R     GR D   + AA     +P    ++D IL      GFS  E V+L+ 
Sbjct: 111 VSNCPGGVRIPFFLGRPD---AVAASPDHLVPEPFDSVDSILARMGDAGFSPVEVVSLLA 167

Query: 269 AHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPG 328
           +H+I  A      D      P   T    + ++    +                  + PG
Sbjct: 168 SHSIAAADKV---DPSIPGTPFDSTPGVFDSQFFIETQL--------------KGRLFPG 210

Query: 329 KFDNS-YFRGLPRGLGLLRVDNMLVKDPRTKPLVDQYASNE 368
             DN    +   +G   L+ D++L +DP+T        +N+
Sbjct: 211 TADNKGEAQSPLQGEIRLQSDHLLARDPQTACEWQSMVNNQ 251

>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} Length = 338

 Score =  145 bits (366), Expect = 2e-40
 Identities = 54/275 (19%), Positives = 83/275 (30%), Gaps = 47/275 (17%)

Query: 110 TCPDFEKIVREFVHQ--KQTQSPSTAAGALRVFMHDCF-------------VDGCDGSVL 154
            C  +  ++ +         +    A  A+R+  HD                 G DGS+L
Sbjct: 14  ACCAWFPVLDDIQANLFNGGKCEEEAHEAVRLTFHDAVGFSLAAQKAGKFGGGGADGSIL 73

Query: 155 ISSNAFNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILT-ASTRNLVVMA 213
                F+  E     N  L     +   +       A    VS  D +  A        A
Sbjct: 74  A----FSDIETAFIPNFGL-----EFTTEGFIPFALAHG--VSFGDFVQFAGAVGAANCA 122

Query: 214 GGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIG 273
           GGPR     GR +          G +P    + D+IL   A  GFS  E V L+ +H+I 
Sbjct: 123 GGPRLQFLAGRSNIS---QPSPDGLVPDPTDSADKILARMADIGFSPTEVVHLLASHSIA 179

Query: 274 FAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNS 333
             +     D     +P   T    + ++                    +     G     
Sbjct: 180 AQY---EVDTDVAGSPFDSTPSVFDTQFFVESLL--------------HGTQFTGSGQGG 222

Query: 334 YFRGLPRGLGLLRVDNMLVKDPRTKPLVDQYASNE 368
                  G   L+ D  L +DPRT        +N+
Sbjct: 223 EVMSPIPGEFRLQSDFALSRDPRTACEWQALVNNQ 257

>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Length = 344

 Score =  136 bits (345), Expect = 2e-37
 Identities = 50/295 (16%), Positives = 81/295 (27%), Gaps = 86/295 (29%)

Query: 110 TCPDFEKIVREFVHQ--KQTQSPSTAAGALRVFMHDCFV-------------DGCDGSVL 154
            C  +  ++ +      + ++  S     LR+  HD                 G DGS++
Sbjct: 22  QCCVWFDVLDDLQTNFYQGSKCESPVRKILRIVFHDAIGFSPALTAAGQFGGGGADGSII 81

Query: 155 ISSNAFNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILT-ASTRNLVVMA 213
                 +  E     N  L        I+   A+       VS  D++  A+   +    
Sbjct: 82  A----HSNIELAFPANGGL-----TDTIEALRAVGINHG--VSFGDLIQFATAVGMSNCP 130

Query: 214 GGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIG 273
           G PR     GR +         P  +P    T+  IL      GFS  E V L+ AH++ 
Sbjct: 131 GSPRLEFLTGRSNSS---QPSPPSLIPGPGNTVTAILDRMGDAGFSPDEVVDLLAAHSLA 187

Query: 274 FAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNS 333
                  +          P D                               +P  FD  
Sbjct: 188 SQEGLNSAI------FRSPLDS------------------------------TPQVFDTQ 211

Query: 334 YFRGL--------------------PRGLGLLRVDNMLVKDPRTKPLVDQYASNE 368
           ++                         G   +R D +L +D RT        S+ 
Sbjct: 212 FYIETLLKGTTQPGPSLGFAEELSPFPGEFRMRSDALLARDSRTACRWQSMTSSN 266

>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Length = 343

 Score =  135 bits (340), Expect = 9e-37
 Identities = 52/298 (17%), Positives = 91/298 (30%), Gaps = 87/298 (29%)

Query: 108 KTTCPDFEKIVREFVHQ--KQTQSPSTAAGALRVFMHDCFV-------------DGCDGS 152
             +C  +  ++ +         Q  + A  ++R+  HD                 G DGS
Sbjct: 11  DASCCAWFDVLDDIQANMFHGGQCGAEAHESIRLVFHDSIAISPAMEAKGKFGGGGADGS 70

Query: 153 VLISSNAFNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILT-ASTRNLVV 211
           ++I    F+  E     N+ L     D V+ ++          V+  D +  A    L  
Sbjct: 71  IMI----FDTIETAFHPNIGL-----DEVVAMQKPFVQKHG--VTPGDFIAFAGAVALSN 119

Query: 212 MAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKG-FSIQEYVALMGAH 270
             G P+ N   GRK           G +P    T+D+I+      G F   E V ++ AH
Sbjct: 120 CPGAPQMNFFTGRKPAT---QPAPDGLVPEPFHTVDQIIARVNDAGEFDELELVWMLSAH 176

Query: 271 TIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKF 330
           ++   +  + +          P D                               +PG F
Sbjct: 177 SVAAVNDVDPT------VQGLPFDS------------------------------TPGIF 200

Query: 331 DNSYFRGL--------------------PRGLGLLRVDNMLVKDPRTKPLVDQYASNE 368
           D+ +F                         G   ++ D+ L +D RT      +  N+
Sbjct: 201 DSQFFVETQFRGTLFPGSGGNQGEVESGMAGEIRIQTDHTLARDSRTACEWQSFVGNQ 258

>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* Length = 271

 Score = 87.3 bits (217), Expect = 6e-20
 Identities = 54/262 (20%), Positives = 87/262 (33%), Gaps = 34/262 (12%)

Query: 113 DFEKIVREFVHQKQTQSPSTAAGALRVFMHDC----FVDGCDGSVLISSNAFNVAERDSD 168
           D    +R  +    ++        +R+  H+                     + + R   
Sbjct: 8   DIRA-LRADIEDMISEKLELGPSLIRLAWHEAASYDCFKKDGS-------PNSASMRFKP 59

Query: 169 INLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGL 228
             L       D+  K    L+   P + S AD+   +    +   GGP     +GR D  
Sbjct: 60  ECLYAGNKGLDIPRKALETLKKKYPQI-SYADLWVLAAYVAIEYMGGPTIPFCWGRVDAK 118

Query: 229 VSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKEFS--DRLFK 286
                   G LP  + T   + ++F   GF+ QE VAL+GAHT G  H  EFS     + 
Sbjct: 119 DGSVCGPDGRLPDGSKTQSHVREVFRRLGFNDQETVALIGAHTCGECH-IEFSGYHGPWT 177

Query: 287 FAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLPRGLGLLR 346
              N       N  + + L                + V++P              L +L 
Sbjct: 178 HDKNGFD----NSFFTQLLD--------------EDWVLNPKVEQMQLMDRATTKLMMLP 219

Query: 347 VDNMLVKDPRTKPLVDQYASNE 368
            D  L+ DP  +  V+ YA + 
Sbjct: 220 SDVCLLLDPSYRKYVELYAKDN 241

>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} PDB: 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* 1mk8_A* 1mkq_A* ... Length = 294

 Score = 65.5 bits (160), Expect = 3e-12
 Identities = 35/192 (18%), Positives = 58/192 (30%), Gaps = 57/192 (29%)

Query: 196 VSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFAS 255
           +S  D+ +      V    GP+     GR D          G LP  +   D +   F  
Sbjct: 102 ISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTT-PDNGRLPDADKDADYVRTFFQR 160

Query: 256 KGFSIQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQN 315
              + +E VALMGAH +G  H  + S     +                            
Sbjct: 161 LNMNDREVVALMGAHALGKTH-LKRSGYEGPWGAA------------------------- 194

Query: 316 ITMTAFNDVMSPGKFDNSYFRGL-------------------PRGLGLLRVDNMLVKDPR 356
                         F N ++  L                     G  +L  B  L++DP+
Sbjct: 195 -----------NNVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTBYSLIQDPK 243

Query: 357 TKPLVDQYASNE 368
              +V +YA+++
Sbjct: 244 YLSIVKEYANDQ 255

>1eys_C Photosynthetic reaction center; membrane protein complex, electron transport; HET: BGL BCL BPH MQ8 HEM CRT LDA PEF; 2.20A {Thermochromatium tepidum} SCOP: a.138.1.2 Length = 382

 Score = 53.3 bits (127), Expect = 5e-08
 Identities = 15/78 (19%), Positives = 27/78 (34%)

Query: 18  YSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLAS 77
           Y      +      P    + + +P A+ + +P A  +  P A   P+           S
Sbjct: 305 YPGLYKTAVTQEALPGSAPASEAAPAAATEAAPEAPAQEVPAAEAVPAAAEPGAAEAAGS 364

Query: 78  PKPSPAASPNPRPLASPM 95
            +P+P     P P A  +
Sbjct: 365 VEPAPVEEVAPAPAAQRL 382

>1eys_C Photosynthetic reaction center; membrane protein complex, electron transport; HET: BGL BCL BPH MQ8 HEM CRT LDA PEF; 2.20A {Thermochromatium tepidum} SCOP: a.138.1.2 Length = 382

 Score = 49.1 bits (116), Expect = 1e-06
 Identities = 14/67 (20%), Positives = 25/67 (37%)

Query: 31  KPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSPAASPNPRP 90
           K +      P    + + +P A+ + +P A  +  P A   P+         A S  P P
Sbjct: 310 KTAVTQEALPGSAPASEAAPAAATEAAPEAPAQEVPAAEAVPAAAEPGAAEAAGSVEPAP 369

Query: 91  LASPMPS 97
           +    P+
Sbjct: 370 VEEVAPA 376

>1eys_C Photosynthetic reaction center; membrane protein complex, electron transport; HET: BGL BCL BPH MQ8 HEM CRT LDA PEF; 2.20A {Thermochromatium tepidum} SCOP: a.138.1.2 Length = 382

 Score = 41.4 bits (96), Expect = 3e-04
 Identities = 12/68 (17%), Positives = 21/68 (30%)

Query: 34  PVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSPAASPNPRPLAS 93
            +     +  A P  +P +   P+      P   A   P+  A P  +   +        
Sbjct: 307 GLYKTAVTQEALPGSAPASEAAPAAATEAAPEAPAQEVPAAEAVPAAAEPGAAEAAGSVE 366

Query: 94  PMPSAKPA 101
           P P  + A
Sbjct: 367 PAPVEEVA 374

>3h0g_A DNA-directed RNA polymerase II subunit RPB1; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe} Length = 1752

 Score = 52.4 bits (125), Expect = 2e-07
 Identities = 42/127 (33%), Positives = 55/127 (43%), Gaps = 16/127 (12%)

Query: 15   SIPYSIANPN----SPN---ASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPV 67
            S  YS  +P+    SP+    SP  SP  SP  SP  SP  SP  SP  SP  SP  SP 
Sbjct: 1596 SPSYSPTSPSYSATSPSYSPTSPSYSP-TSPSYSP-TSPSYSP-TSPSYSP-TSPSYSP- 1650

Query: 68   ASPK--PSPLASPKPSPAASPNPRPLASPMPSAKPALRADYYKTTCPDFEKIVREFVHQK 125
             SP   P+  +    SP+ SP   P  SP  S   +  +  Y  T P +      +    
Sbjct: 1651 TSPSYSPTSPSYSPTSPSYSPT-SPSYSP-TSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1708

Query: 126  QTQSPST 132
             + SP++
Sbjct: 1709 PSYSPTS 1715

>3h0g_A DNA-directed RNA polymerase II subunit RPB1; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe} Length = 1752

 Score = 48.9 bits (116), Expect = 2e-06
 Identities = 37/84 (44%), Positives = 39/84 (46%), Gaps = 15/84 (17%)

Query: 14   ISIPYSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPS 73
             S  YS   P SP+ SP      SP  SP  SP  S   SP  SP  SP  SP  SP  S
Sbjct: 1581 TSPSYS---PTSPSYSP-----TSPSYSP-TSPSYSA-TSPSYSP-TSPSYSP-TSPSYS 1628

Query: 74   PLASPKPSPAASPNPRPLASPMPS 97
            P  SP  SP  SP+  P  SP  S
Sbjct: 1629 P-TSPSYSP-TSPSYSP-TSPSYS 1649

>3h0g_A DNA-directed RNA polymerase II subunit RPB1; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe} Length = 1752

 Score = 46.6 bits (110), Expect = 1e-05
 Identities = 40/118 (33%), Positives = 50/118 (42%), Gaps = 12/118 (10%)

Query: 15   SIPYSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSP 74
            S  YS  +P+    SP  SP  SP  SP  SP  SP  SP  SP  SP  SP  SP  SP
Sbjct: 1631 SPSYSPTSPSYSPTSPSYSP-TSPSYSP-TSPSYSP-TSPSYSP-TSPSYSP-TSPSYSP 1685

Query: 75   LASPKPSPAASPNPRPLASPMPSAKPALRADYYKTTCPDFEKIVREFVHQKQTQSPST 132
                  SP+ SP     +   PS  P   +  Y  T P +      +     + SP++
Sbjct: 1686 T-----SPSYSPTSPSYSPTSPSYSPT--SPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1736

>3h0g_A DNA-directed RNA polymerase II subunit RPB1; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe} Length = 1752

 Score = 45.8 bits (108), Expect = 2e-05
 Identities = 35/94 (37%), Positives = 39/94 (41%), Gaps = 12/94 (12%)

Query: 12   AFISIPYSIANPNSPNASPKPSPV-----ASPKPSPRASPKPSPVASPKPSPLASPKPSP 66
             + S   S  +P     SP  SP       SP   P +SP  SP  SP  SP  SP  SP
Sbjct: 1538 GYTSPFSSAMSPGYGLTSPSYSPSSPGYSTSPAYMP-SSPSYSP-TSPSYSP-TSPSYSP 1594

Query: 67   VASPKPSPLASPKPSPAASPNPRPLASPMPSAKP 100
              SP  SP  SP  S   SP+  P  SP  S   
Sbjct: 1595 -TSPSYSP-TSPSYSA-TSPSYSP-TSPSYSPTS 1624

>1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A 1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A* 1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A* 1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ... Length = 1733

 Score = 48.9 bits (116), Expect = 2e-06
 Identities = 38/99 (38%), Positives = 43/99 (43%), Gaps = 8/99 (8%)

Query: 14   ISIPYSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPS 73
             S  YS  +P+    SP  SP  SP  SP  SP  SP  SP  SP  SP  SP  SP  S
Sbjct: 1580 TSPSYSPTSPSYSPTSPSYSP-TSPSYSP-TSPSYSP-TSPSYSP-TSPSYSP-TSPSYS 1634

Query: 74   PLASPKP--SPAASPNPRPLASPMPSAKPALRADYYKTT 110
            P +      SP+ SP   P  SP   A       Y  T+
Sbjct: 1635 PTSPSYSPTSPSYSPTS-PSYSPTSPAYSPTSPSYSPTS 1672

>1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A 1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A* 1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A* 1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ... Length = 1733

 Score = 46.2 bits (109), Expect = 1e-05
 Identities = 39/102 (38%), Positives = 45/102 (44%), Gaps = 9/102 (8%)

Query: 15   SIPYSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSP 74
            S  YS  +P+    SP  SP  SP  SP  SP  SP  SP  SP  SP  SP  SP  SP
Sbjct: 1574 SPSYSPTSPSYSPTSPSYSP-TSPSYSP-TSPSYSP-TSPSYSP-TSPSYSP-TSPSYSP 1628

Query: 75   LASPKPSPAASPNPRPLASPMPSAKPALRAD--YYKTTCPDF 114
              SP  SP  SP+  P +       P+       Y  T P +
Sbjct: 1629 -TSPSYSP-TSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSY 1668

>1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A 1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A* 1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A* 1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ... Length = 1733

 Score = 45.9 bits (108), Expect = 2e-05
 Identities = 37/120 (30%), Positives = 49/120 (40%), Gaps = 7/120 (5%)

Query: 14   ISIPYSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASP-KP 72
             S  YS  +P+    SP  SP  SP  SP  SP  SP  SP  SP  SP  SP +    P
Sbjct: 1587 TSPSYSPTSPSYSPTSPSYSP-TSPSYSP-TSPSYSP-TSPSYSP-TSPSYSPTSPSYSP 1642

Query: 73   SPLASPKPSPAASPNPRPLASPMPSAKPALRADYYKTTCPDFEKIVREFVHQKQTQSPST 132
            +  +    SP+ SP     +   PS  P   +  Y  T P +      +       SP++
Sbjct: 1643 TSPSYSPTSPSYSPTSPAYSPTSPSYSPT--SPSYSPTSPSYSPTSPSYSPTSPNYSPTS 1700

>1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A 1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A* 1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A* 1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ... Length = 1733

 Score = 43.2 bits (101), Expect = 1e-04
 Identities = 37/105 (35%), Positives = 46/105 (43%), Gaps = 9/105 (8%)

Query: 12   AFISIPYSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPK 71
             F +   +  +P    +SP  SP  SP  SP  SP  SP  SP  SP  SP  SP  SP 
Sbjct: 1522 PFGAYGEAPTSPGFGVSSPGFSP-TSPTYSP-TSPAYSP-TSPSYSP-TSPSYSP-TSPS 1576

Query: 72   PSPLASP--KPSPAASPNPRPLASPMPSAKPALRADYYKTTCPDF 114
             SP +      SP+ SP   P  SP  S   +  +  Y  T P +
Sbjct: 1577 YSPTSPSYSPTSPSYSPTS-PSYSPT-SPSYSPTSPSYSPTSPSY 1619

>1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A 1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A* 1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A* 1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ... Length = 1733

 Score = 42.4 bits (99), Expect = 2e-04
 Identities = 35/105 (33%), Positives = 42/105 (40%), Gaps = 22/105 (20%)

Query: 15   SIPYSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLA------SPKPSPVA 68
            S  +S  +P     SP  SP  SP  SP  SP  SP  SP  SP +      SP  SP +
Sbjct: 1539 SPGFSPTSPTYSPTSPAYSP-TSPSYSP-TSPSYSP-TSPSYSPTSPSYSPTSPSYSPTS 1595

Query: 69   ------SPKPSPLASPKPSPA------ASPNPRPLASPMPSAKPA 101
                  SP  SP  SP  SP        SP+  P +       P+
Sbjct: 1596 PSYSPTSPSYSP-TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1639

>1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A 1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A* 1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A* 1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ... Length = 1733

 Score = 42.0 bits (98), Expect = 3e-04
 Identities = 30/75 (40%), Positives = 34/75 (45%), Gaps = 6/75 (8%)

Query: 15   SIPYSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSP 74
            S  YS  +P+    SP  SP  SP  SP  SP  SP  SP  SP  SP  SP  SP  SP
Sbjct: 1665 SPSYSPTSPSYSPTSPSYSP-TSPSYSP-TSPNYSP-TSPSYSP-TSPGYSP-GSPAYSP 1719

Query: 75   LASPKPSPAASPNPR 89
                +     + N R
Sbjct: 1720 -KQDEQKHNENENSR 1733

>1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A 1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A* 1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A* 1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ... Length = 1733

 Score = 41.2 bits (96), Expect = 5e-04
 Identities = 39/108 (36%), Positives = 42/108 (38%), Gaps = 18/108 (16%)

Query: 15   SIPYSIANPNSPNASPKPSPVASPKPSPR------ASPKPSPVASPKPSPLASPKPSPV- 67
            S  YS  +P+    SP  SP  SP  SP        SP  SP  SP  SP  SP  SP  
Sbjct: 1630 SPSYSPTSPSYSPTSPSYSP-TSPSYSPTSPAYSPTSPSYSP-TSPSYSP-TSPSYSPTS 1686

Query: 68   -----ASPKPSPLASPKPSPAASPNPRPLASPMPSAKPALRADYYKTT 110
                  SP  SP  SP  SP  SP   P  SP  S K   +       
Sbjct: 1687 PSYSPTSPNYSP-TSPSYSP-TSPGYSP-GSPAYSPKQDEQKHNENEN 1731

>1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A 1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A* 1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A* 1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ... Length = 1733

 Score = 40.8 bits (95), Expect = 6e-04
 Identities = 29/88 (32%), Positives = 35/88 (39%), Gaps = 7/88 (7%)

Query: 17   PYSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLA 76
                    SP  +   +P  SP     +SP  SP  SP  SP  SP  SP  SP  SP  
Sbjct: 1513 GADYGEATSPFGAYGEAP-TSPGFGV-SSPGFSP-TSPTYSP-TSPAYSP-TSPSYSP-T 1566

Query: 77   SPKPSPAASPNPRPLASPMPSAKPALRA 104
            SP  SP  SP+  P +       P+   
Sbjct: 1567 SPSYSP-TSPSYSPTSPSYSPTSPSYSP 1593

>3v1v_A 2-MIB synthase, 2-methylisoborneol synthase; class I terpenoid cyclase fold, DDXXXXD motif, NDXXSXXXE MOT methylisoborneol biosynthesis; HET: GST; 1.80A {Streptomyces coelicolor} PDB: 3v1x_A* Length = 433

 Score = 44.7 bits (105), Expect = 3e-05
 Identities = 15/84 (17%), Positives = 21/84 (25%), Gaps = 2/84 (2%)

Query: 23  PNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSP 82
            +    S   +  AS   +    P   P  +P P P  +    P      S L      P
Sbjct: 19  SHMVIPSASVTSAASDFLAALHPPVTVPDPAPPPPPAPAAGNPPDTVTGDSVLQRILRGP 78

Query: 83  AASP--NPRPLASPMPSAKPALRA 104
                 +  P         P   A
Sbjct: 79  TGPGTTSLAPAVRYGRQPGPEAPA 102

>3v1v_A 2-MIB synthase, 2-methylisoborneol synthase; class I terpenoid cyclase fold, DDXXXXD motif, NDXXSXXXE MOT methylisoborneol biosynthesis; HET: GST; 1.80A {Streptomyces coelicolor} PDB: 3v1x_A* Length = 433

 Score = 42.8 bits (100), Expect = 1e-04
 Identities = 16/91 (17%), Positives = 26/91 (28%)

Query: 15  SIPYSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSP 74
           S  +   + +          + S   +  AS   + +  P   P  +P P P  +    P
Sbjct: 3   SSHHHHHHSSGLVPRGSHMVIPSASVTSAASDFLAALHPPVTVPDPAPPPPPAPAAGNPP 62

Query: 75  LASPKPSPAASPNPRPLASPMPSAKPALRAD 105
                 S        P      S  PA+R  
Sbjct: 63  DTVTGDSVLQRILRGPTGPGTTSLAPAVRYG 93

>3ghp_A Cellulosomal scaffoldin adaptor protein B; linker segments, beta barrel, alpha helix, beta flaps, structural protein; 2.49A {Acetivibrio cellulolyticus} Length = 227

 Score = 43.3 bits (101), Expect = 5e-05
 Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 1/62 (1%)

Query: 14  ISIPYSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPS 73
           I   Y +  P   N++P  +   + KP+  AS  P+   +P P+   +    P A P   
Sbjct: 160 IQSGYFVIQPGEINSAPIATATPTTKPTAFASTMPTVTLTPTPTATTTT-TIPTAVPTTE 218

Query: 74  PL 75
            L
Sbjct: 219 SL 220

>3nwa_A GB, GB-1, GB1, envelope glycoprotein B; coiled-coil, membrane fusion, viral P glycoprotein B, HSV-1, membrane; HET: NAG; 2.26A {Human herpesvirus 1} PDB: 3nwf_A* 3nw8_A* 3nwd_A* Length = 703

 Score = 44.2 bits (104), Expect = 5e-05
 Identities = 18/89 (20%), Positives = 25/89 (28%), Gaps = 2/89 (2%)

Query: 26  PNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPS--PA 83
           P A   P        +  A+  P+  A P      +  P P  + KP     P+P+   A
Sbjct: 2   PAAPTSPGTPGVAAATQAANGGPATPAPPALGAAPTGDPKPKKNKKPKNPTPPRPAGDNA 61

Query: 84  ASPNPRPLASPMPSAKPALRADYYKTTCP 112
                            A   D     CP
Sbjct: 62  TVAAGHATLREHLRDIKAENTDANFYVCP 90

>3nwa_A GB, GB-1, GB1, envelope glycoprotein B; coiled-coil, membrane fusion, viral P glycoprotein B, HSV-1, membrane; HET: NAG; 2.26A {Human herpesvirus 1} PDB: 3nwf_A* 3nw8_A* 3nwd_A* Length = 703

 Score = 41.1 bits (96), Expect = 5e-04
 Identities = 18/99 (18%), Positives = 28/99 (28%), Gaps = 2/99 (2%)

Query: 21  ANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKP 80
           A P SP      +   +    P     P+  A+P   P       P     P P      
Sbjct: 3   AAPTSPGTPGVAAATQAANGGPATPAPPALGAAPTGDPKPKKNKKPKNPTPPRPAGDNAT 62

Query: 81  SPAASPNPRPLASPMPSAKPALRADYYKTTCPDFEKIVR 119
             A     R     + +      A++Y    P    +V+
Sbjct: 63  VAAGHATLREHLRDIKAENT--DANFYVCPPPTGATVVQ 99

>2hye_C Cullin-4A, CUL-4A; beta propeller, ring finger, zinc finger, propeller cluster, helical repeats, cullin repeats, protein binding; HET: DNA; 3.10A {Homo sapiens} SCOP: a.4.5.34 a.118.17.1 e.40.1.1 PDB: 4a0k_A* 4a0c_C 4a0l_E* Length = 759

 Score = 43.3 bits (101), Expect = 1e-04
 Identities = 14/80 (17%), Positives = 28/80 (35%), Gaps = 1/80 (1%)

Query: 52  ASPKPSPLASPKPSPVASPKPSPLASPKPSPAASPNPRPLASPMPSAKPALRADYYKTTC 111
            +P+    ++         KP+ LA+    P  +   + L       +P L  +Y + T 
Sbjct: 4   EAPRKGSFSALVGRTNGLTKPAALAAAPAKPGGAGGSKKLVIKNFRDRPRLPDNYTQDTW 63

Query: 112 PDFEKIVREFVHQKQTQSPS 131
               + VR  V    +   +
Sbjct: 64  RKLHEAVRA-VQSSTSIRYN 82

>3a58_A Exocyst complex component SEC3; protein complex, PH domain, GTPase, membrane traffic, coiled coil, exocytosis, phosphoprotein; HET: GNP; 2.60A {Saccharomyces cerevisiae} Length = 320

 Score = 42.6 bits (99), Expect = 1e-04
 Identities = 12/78 (15%), Positives = 23/78 (29%)

Query: 17  PYSIANPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLA 76
            Y  A   +   S  P    +   +   +     V    P+       +   +P  +P +
Sbjct: 242 SYQRAVITNRPGSVSPIKSPTSNFTTNTTQSVGSVPFSAPTERTRRSETESVNPVSTPAS 301

Query: 77  SPKPSPAASPNPRPLASP 94
               +   S N  P +S 
Sbjct: 302 VEYHAGMKSLNKAPYSSN 319

>3a58_A Exocyst complex component SEC3; protein complex, PH domain, GTPase, membrane traffic, coiled coil, exocytosis, phosphoprotein; HET: GNP; 2.60A {Saccharomyces cerevisiae} Length = 320

 Score = 40.3 bits (93), Expect = 6e-04
 Identities = 9/76 (11%), Positives = 23/76 (30%)

Query: 26  PNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSPAAS 85
              S + + + +   S      P+   +   +      P    + +     +   +P ++
Sbjct: 239 DERSYQRAVITNRPGSVSPIKSPTSNFTTNTTQSVGSVPFSAPTERTRRSETESVNPVST 298

Query: 86  PNPRPLASPMPSAKPA 101
           P      + M S   A
Sbjct: 299 PASVEYHAGMKSLNKA 314

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.5 bits (99), Expect = 2e-04
 Identities = 43/320 (13%), Positives = 91/320 (28%), Gaps = 101/320 (31%)

Query: 95  MP-SAKPALRADYYKTTCPDFEKIVREF------VHQKQTQSPSTAAGALRVFMH--DC- 144
           +  S K  +  D     C  + K+  +       ++ K   SP T    L+  ++  D  
Sbjct: 158 VLGSGKTWVALD----VCLSY-KVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPN 212

Query: 145 FVDGCDGSVLISSNAFNVAERDSDINLSLPG----------------DAFDVVIKIKNAL 188
           +    D S  I     ++      +  S P                 +AF++        
Sbjct: 213 WTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNL-------- 264

Query: 189 EDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAA-RIPGNLPTNNMTMD 247
                   SC  +LT  TR   V              D L +     I  +  +  +T D
Sbjct: 265 --------SCKILLT--TRFKQVT-------------DFLSAATTTHISLDHHSMTLTPD 301

Query: 248 EILKMFASK-GFSIQE-----------YVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDP 295
           E+  +         Q+            ++++          ++     +    +   D 
Sbjct: 302 EVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIA------ESIRDGLAT-WDNWKHVNCD- 353

Query: 296 ELNPKYAEALKAACKNHEQNITMTAFND-VMSPGKFDNSYFRGLPRG-LGLL------RV 347
               K    ++++    E       F+   + P    +++   +P   L L+        
Sbjct: 354 ----KLTTIIESSLNVLEPAEYRKMFDRLSVFP---PSAH---IPTILLSLIWFDVIKSD 403

Query: 348 DNMLVKDPRTKPLVDQYASN 367
             ++V       LV++    
Sbjct: 404 VMVVVNKLHKYSLVEKQPKE 423

>2grx_C Protein TONB; beta barrel, outer membrane, heterocomplex, inter-protein beta sheet, protein-protein, metal transport; HET: GCN KDO GMH FTT DAO MYR FCI; 3.30A {Escherichia coli} SCOP: d.212.1.2 PDB: 1xx3_A Length = 229

 Score = 40.9 bits (95), Expect = 3e-04
 Identities = 23/88 (26%), Positives = 29/88 (32%), Gaps = 1/88 (1%)

Query: 15  SIPYSIANPNSPNASPKPSPVASPKPSPRASPKPSPV-ASPKPSPLASPKPSPVASPKPS 73
            I  ++  P          P   P   P   P+P P      P  +  PKP P   PKP 
Sbjct: 34  PISVTMVTPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPVVIEKPKPKPKPKPKPV 93

Query: 74  PLASPKPSPAASPNPRPLASPMPSAKPA 101
                +P     P     ASP  +  PA
Sbjct: 94  KKVQEQPKRDVKPVESRPASPFENTAPA 121

>3gdb_A Endo-D, putative uncharacterized protein SPR0440; alpha-beta-barrels, cell WALL, peptidoglycan-anchor, secreted, hydrolase; HET: PGE; 1.87A {Streptococcus pneumoniae} PDB: 2xqx_A Length = 937

 Score = 41.5 bits (96), Expect = 4e-04
 Identities = 18/143 (12%), Positives = 29/143 (20%), Gaps = 3/143 (2%)

Query: 22  NPNSPNASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPS 81
             ++     K S V +  PS  A PK       KP        S  A+         +P 
Sbjct: 90  AASAAKPEEKASEVVAETPSAEAKPKSDKETEAKPEATNQGDESKPAAEANKTEKEVQPD 149

Query: 82  PAASPNPRPLASPMPSAKPALRADYYKTTCPDFEKIVREFVHQK---QTQSPSTAAGALR 138
              +         +          +      D        V             A+   +
Sbjct: 150 VPKNTEKTLKPKEIKFNSWEELLKWEPGAREDDAINRGSVVLASRRTGHLVNEKASKEAK 209

Query: 139 VFMHDCFVDGCDGSVLISSNAFN 161
           V               +    F 
Sbjct: 210 VQALSNTNSKAKDHASVGGEEFK 232

>3oun_A Putative uncharacterized protein TB39.8; peptidoglycan, Ser/Thr kinase, pseudokinase, FHA domain, REG phosphorylation; HET: TPO; 2.71A {Mycobacterium tuberculosis} Length = 157

 Score = 39.1 bits (91), Expect = 5e-04
 Identities = 11/68 (16%), Positives = 17/68 (25%)

Query: 35  VASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSPAASPNPRPLASP 94
           + S +     S    P  S  P      +P+          A     PA           
Sbjct: 1   MGSSQHHHHHSSGLVPRGSHMPQGGGYAEPAGRDYDYGQSGAPDYGQPAPGGYSGYGQGG 60

Query: 95  MPSAKPAL 102
             SA  ++
Sbjct: 61  YGSAGTSV 68

>3oun_A Putative uncharacterized protein TB39.8; peptidoglycan, Ser/Thr kinase, pseudokinase, FHA domain, REG phosphorylation; HET: TPO; 2.71A {Mycobacterium tuberculosis} Length = 157

 Score = 38.7 bits (90), Expect = 8e-04
 Identities = 10/66 (15%), Positives = 13/66 (19%)

Query: 28 ASPKPSPVASPKPSPRASPKPSPVASPKPSPLASPKPSPVASPKPSPLASPKPSPAASPN 87
           S +     S    PR S  P      +P+          A     P             
Sbjct: 2  GSSQHHHHHSSGLVPRGSHMPQGGGYAEPAGRDYDYGQSGAPDYGQPAPGGYSGYGQGGY 61

Query: 88 PRPLAS 93
               S
Sbjct: 62 GSAGTS 67

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	368
3hdl_A	304	Royal PALM TREE peroxidase; glycosylated, oxidored	100.0
1fhf_A	304	SEED coat peroxidase; oxidoreductase; HET: HEM; 2.	100.0
1pa2_A	306	Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45	100.0
1gwu_A	309	Peroxidase C1A; oxidoreductase, glycoprotein, heme	100.0
1qgj_A	300	Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A	100.0
1sch_A	294	PNP, peanut peroxidase, major cationic isozyme; ca	100.0
1bgp_A	309	Barley grain peroxidase; chromoprotein, oxidoreduc	100.0
1iyn_A	295	Chloroplastic ascorbate peroxidase; hydrogen perox	100.0
2cca_A	740	Peroxidase/catalase T; oxidoreductase, catalase-pe	100.0
1ub2_A	720	Catalase-peroxidase; KATG, cyanobacteria, oxidored	100.0
2vcn_A	261	Ascorbate peroxidase; INH, APX, isoniazid, oxidore	100.0
1itk_A	731	Catalase-peroxidase; heme protein, oxidoreductase;	100.0
3m5q_A	357	Manganese peroxidase 1; heme, Mn(II)-binding site,	100.0
1llp_A	343	LIP4.15, lignin peroxidase; heme protein, glyco pr	100.0
2e39_A	344	Peroxidase; heme protein, coordination geometry of	100.0
3riv_A	271	Ascorbate peroxidase; alpha helical bundle, heme p	100.0
3fmu_A	331	VersatIle peroxidase VPL2; class II (fungal) perox	100.0
3ut2_A	764	Catalase-peroxidase 2; KATG, fungal, heme enzyme,	100.0
3vli_A	737	Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1	100.0
3n3r_A	748	Catalase-peroxidase; E198A variant, tuberclosis, i	100.0
3q3u_A	338	Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A	100.0
3e2o_A	294	CCP, cytochrome C peroxidase; cytochrome C peroxid	100.0
1u2k_A	309	Peroxidase/catalase HPI; KATG, catalase-peroxidase	100.0
2cca_A	740	Peroxidase/catalase T; oxidoreductase, catalase-pe	100.0
1itk_A	731	Catalase-peroxidase; heme protein, oxidoreductase;	100.0
1ub2_A	720	Catalase-peroxidase; KATG, cyanobacteria, oxidored	100.0
3rrw_A	268	Thylakoid lumenal 29 kDa protein, chloroplastic; c	100.0
3vli_A	737	Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1	100.0
3n3r_A	748	Catalase-peroxidase; E198A variant, tuberclosis, i	100.0
3ut2_A	764	Catalase-peroxidase 2; KATG, fungal, heme enzyme,	100.0

>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} SCOP: a.93.1.0

Probab=100.00  E-value=8e-91  Score=671.23  Aligned_cols=264  Identities=38%  Similarity=0.684  Sum_probs=254.6

Q ss_pred             cccccccccCchHHHHHHHHHhhhhccCCccchhhhhhhhhcccccCCCceeeeccCCCCcccccccccC-CCCcchhHH
Q 039585          102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFNVAERDSDINL-SLPGDAFDV  180 (368)
Q Consensus       102 L~~~fY~~sCp~~e~iV~~~v~~~~~~~~~~a~~llRl~FHDc~v~GcDgSill~~~~~~~~E~~~~~N~-~l~~~~~~~  180 (368)
                      |+.+||+++||++|.||++.|++.+.++++++++|||||||||||+||||||||+++.++.+|+++.+|. +|  |||++
T Consensus         2 L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSiLld~t~~~~~Ek~~~~N~~~l--rgf~v   79 (304)
T 3hdl_A            2 LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANNTAEKDAIPNNPSL--RGFEV   79 (304)
T ss_dssp             CEETTTTTTCTTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTTSSSSGGGCCCBTTBCCGGGSTTTTTTC--CCHHH
T ss_pred             CccChhhCcCcCHHHHHHHHHHHHHHhCCcchHHHHHHheecccCCCCCeeeeecCCCCCcccccCCCcccch--HHHHH
Confidence            7889999999999999999999999999999999999999999999999999999988788999999998 89  99999


Q ss_pred             HHHHHHHHHhhCCCCCcHHHHHHhhhhhHHHhcCCCCcccccCCcCCccccccCCCCCCCCCCCCHHHHHHHHHHCCCCh
Q 039585          181 VIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSI  260 (368)
Q Consensus       181 i~~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~  260 (368)
                      ||.||++||++||++|||||||+||||+||+++|||.|.|++||||++++...+++++||.|+.++++|++.|++|||+.
T Consensus        80 id~iK~~le~~Cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~  159 (304)
T 3hdl_A           80 ITAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTA  159 (304)
T ss_dssp             HHHHHHHHHHHSTTTSCHHHHHHHHHHHHHHHHHCCCCCCEECCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHTTTCCH
T ss_pred             HHHHHHHHHhhCCCCccHHHHHHHHHhhhhhccCCCccccccCccCCCCCCccccccCCCCCCCCHHHHHHHHHHcCCCH
Confidence            99999999999999999999999999999999999999999999999999887777789999999999999999999999


Q ss_pred             hhhhhhcccceeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCC--CcccccCCCCCCCccchhhhhhc
Q 039585          261 QEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQN--ITMTAFNDVMSPGKFDNSYFRGL  338 (368)
Q Consensus       261 ~dlVaLsGaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~--~~~~~~lD~~tp~~FDN~Yy~~l  338 (368)
                      +||||||||||||++||.+|.+|||||+|++.+||+||+.|++.||+.||.++ +  +++.++||..||++|||+||+||
T Consensus       160 ~d~VaLsGaHTiG~ahC~~f~~Rly~f~~~~~~DP~ld~~~a~~L~~~Cp~~~-~~~~~~~~~lD~~TP~~FDN~Yy~nL  238 (304)
T 3hdl_A          160 DEMVTLSGAHSIGVAHCSSFTNRLYNFNSGSGIDPTLSPSYAALLRNTCPANS-TRFTPITVSLDIITPSVLDNMYYTGV  238 (304)
T ss_dssp             HHHHHHGGGGGSSEEEGGGTGGGTSSCSSSSSSCTTSCHHHHHHHHHHSCTTC-CTTSCCEEESCSSSTTSCSTHHHHHH
T ss_pred             HHhhhhhccccccccccchhhhhhcccCCCCCCCCcccHHHHHHHhccCCCCC-CCCCccccCCCCCCcccccHHHHHHH
Confidence            99999999999999999999999999999988999999999999999999755 4  56678999999999999999999


Q ss_pred             cccccccccchhcccCCChHHHHHHhhhCC
Q 039585          339 PRGLGLLRVDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       339 l~~~glL~SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                      +.++|||+|||+|++|++|+.+|++||.||
T Consensus       239 ~~~~glL~SDq~L~~d~~t~~~V~~yA~~~  268 (304)
T 3hdl_A          239 QLTLGLLTSDQALVTEANLSAAVKANAMNL  268 (304)
T ss_dssp             HTTCCCSHHHHGGGSSHHHHHHHHHHHHCH
T ss_pred             HhCcCCCCCCHHHhcCccHHHHHHHhccCH
Confidence            999999999999999999999999999885

>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1

Probab=100.00  E-value=2.3e-88  Score=655.02  Aligned_cols=265  Identities=36%  Similarity=0.657  Sum_probs=254.2

Q ss_pred             ccccccccccCchHHHHHHHHHhhhhccCCccchhhhhhhhhcccccCCCceeeeccCCCCcccccccccC-CCCcchhH
Q 039585          101 ALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFNVAERDSDINL-SLPGDAFD  179 (368)
Q Consensus       101 ~L~~~fY~~sCp~~e~iV~~~v~~~~~~~~~~a~~llRl~FHDc~v~GcDgSill~~~~~~~~E~~~~~N~-~l~~~~~~  179 (368)
                      +|+++||+++||++|.||++.|++.+.++++++++||||+||||||+||||||||+++.++.+|+++++|. ++  |||+
T Consensus         1 ~L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDcfv~GcDgSilld~t~~~~~E~~~~~N~~~~--rgf~   78 (304)
T 1fhf_A            1 QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTIESEQDALPNINSI--RGLD   78 (304)
T ss_dssp             CCBTTTTTTTSTTHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTTTCSSSGGGCCCCSSCCCGGGSTTTTTTC--CCHH
T ss_pred             CCCCccccCcCcCHHHHHHHHHHHHHHhCCcchhhhhhheeeecccCCCCceEEecCCCCCcccccCccccccc--hhHH
Confidence            58999999999999999999999999999999999999999999999999999999887777999999997 66  9999


Q ss_pred             HHHHHHHHHHhhCCCCCcHHHHHHhhhhhHHHhcCCCCcccccCCcCCccccccCCCCCCCCCCCCHHHHHHHHHHCCCC
Q 039585          180 VVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFS  259 (368)
Q Consensus       180 ~i~~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~  259 (368)
                      +|+.||++||++||++|||||||+||||+||+++|||.|.|++||+|++++...+++++||.|+.++++|++.|++|||+
T Consensus        79 vid~iK~~le~~cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~  158 (304)
T 1fhf_A           79 VVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLN  158 (304)
T ss_dssp             HHHHHHHHHHTTSTTTSCHHHHHHHHHHHHHHTTTCCCCCCCBCCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHhCCCcccHHHHHHHHHHHHHHhcCCCccCCcCCCCCCcccccccccccCCCCCCCHHHHHHHHHHcCCC
Confidence            99999999999999999999999999999999999999999999999999987777678999999999999999999999


Q ss_pred             hhhhhhhcccceeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCCCCccchhhhhhcc
Q 039585          260 IQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLP  339 (368)
Q Consensus       260 ~~dlVaLsGaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~ll  339 (368)
                      .+||||||||||||++||.+|.+|||||+|++++||+||+.|++.|++.||+++ +++..+.||..||.+|||+||+||+
T Consensus       159 ~~d~VaLsGaHTiG~ahc~~f~~Rlynf~g~~~~dp~~~~~~~~~L~~~Cp~~~-~~~~~~~lD~~tp~~FDn~Yy~~l~  237 (304)
T 1fhf_A          159 TLDLVTLSGGHTFGRARCSTFINRLYNFSNTGNPDPTLNTTYLEVLRARCPQNA-TGDNLTNLDLSTPDQFDNRYYSNLL  237 (304)
T ss_dssp             HHHHHHHGGGGGSCEEEGGGTGGGTSCGGGSSSCCTTSCHHHHHHHHHHSCSSC-SSCCEEESCSSSTTSCSTHHHHHHH
T ss_pred             HHHhhhhcccceeceecccccccccccCCCCCCCCCCcCHHHHHHhhccCCCCC-CCCccccCCcccccccchhhhhhhc
Confidence            999999999999999999999999999999988999999999999999999765 5667788998899999999999999


Q ss_pred             ccccccccchhccc-CCC-hHHHHHHhhhCC
Q 039585          340 RGLGLLRVDNMLVK-DPR-TKPLVDQYASNE  368 (368)
Q Consensus       340 ~~~glL~SD~~L~~-d~~-t~~~V~~yA~d~  368 (368)
                      .++|||+|||+|++ |++ |+.+|++||.||
T Consensus       238 ~~~gll~SD~~L~~~d~~~t~~~v~~ya~~~  268 (304)
T 1fhf_A          238 QLNGLLQSDQELFSTPGADTIPIVNSFSSNQ  268 (304)
T ss_dssp             TTCCSSHHHHTTTSSTTCSSHHHHHHHHHCH
T ss_pred             cCceeehHhHHHhcCChHHHHHHHHHHhhCH
Confidence            99999999999999 999 999999999875

>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A*

Probab=100.00  E-value=3.5e-88  Score=654.28  Aligned_cols=265  Identities=37%  Similarity=0.661  Sum_probs=253.9

Q ss_pred             ccccccccccCchHHHHHHHHHhhhhccCCccchhhhhhhhhcccccCCCceeeeccCCCCcccccccccC-CCCcchhH
Q 039585          101 ALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFNVAERDSDINL-SLPGDAFD  179 (368)
Q Consensus       101 ~L~~~fY~~sCp~~e~iV~~~v~~~~~~~~~~a~~llRl~FHDc~v~GcDgSill~~~~~~~~E~~~~~N~-~l~~~~~~  179 (368)
                      +|+++||++|||++|+||++.|++.+.++++++++||||+||||||+||||||||+++.++.+|+++++|. ++  |||+
T Consensus         2 ~L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDcfv~GcDgSilld~t~~~~~E~~~~~N~~~l--rgf~   79 (306)
T 1pa2_A            2 QLNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTGSIQSEKNAGPNVNSA--RGFN   79 (306)
T ss_dssp             CCBTTTTTTTCTTHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHTTTSSSSGGGCCCCSSCCCGGGSTTTTTTC--CCHH
T ss_pred             CCCCccccCcCcCHHHHHHHHHHHHHHhCCccchhhhhhhhhhccccCCCcceeecCCCCccccccCccccccc--hhHH
Confidence            58999999999999999999999999999999999999999999999999999999887777899999996 78  9999


Q ss_pred             HHHHHHHHHHhhCCCCCcHHHHHHhhhhhHHHhcCCCCcccccCCcCCccccccCCCCCCCCCCCCHHHHHHHHHHCCCC
Q 039585          180 VVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFS  259 (368)
Q Consensus       180 ~i~~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~  259 (368)
                      +|+.||++||++||++|||||||+||||+||+++|||.|.|++||+|++++....++++||.|+.++++|++.|++|||+
T Consensus        80 vid~iK~~le~~cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~  159 (306)
T 1pa2_A           80 VVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVLLGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLN  159 (306)
T ss_dssp             HHHHHHHHHHHHSTTTCCHHHHHHHHHHHHHHHTTCCCCCCCBCCBBCSCCCHHHHHHHSCCTTSCHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHhhCCCCcCHHHHHHHHHHHHHHhcCCCcccCCCCCCCCCCccccccccCCCCCCCCHHHHHHHHHHcCCC
Confidence            99999999999999999999999999999999999999999999999999987767678999999999999999999999


Q ss_pred             hhhhhhhcccceeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCCCCccchhhhhhcc
Q 039585          260 IQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLP  339 (368)
Q Consensus       260 ~~dlVaLsGaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~ll  339 (368)
                      .+||||||||||||++||.+|.+|||||+|++++||+||+.|++.|++.||+++ +++..+.||..||++|||+||+||+
T Consensus       160 ~~d~VaLsGaHTiG~ahc~~f~~Rlynf~g~~~~dp~~~~~~~~~L~~~Cp~~~-~~~~~~~~D~~tp~~FDn~Yy~~l~  238 (306)
T 1pa2_A          160 TNDLVALSGAHTFGRARCGVFNNRLFNFSGTGNPDPTLNSTLLSTLQQLCPQNG-SASTITNLDLSTPDAFDNNYFANLQ  238 (306)
T ss_dssp             HHHHHHHHGGGGSSEEEGGGTGGGTSSGGGSSSCCTTSCHHHHHHHHHHSCTTS-CTTCEEESCSSSSSSCSTHHHHHHH
T ss_pred             HHHheeeccceEeeeeccccccccccccCCCCCCCcccCHHHHHHHHhhCCCCC-CCCccccCCCCCCCccchHHhhccc
Confidence            999999999999999999999999999999988999999999999999999764 4566788999999999999999999


Q ss_pred             ccccccccchhccc-CCC-hHHHHHHhhhCC
Q 039585          340 RGLGLLRVDNMLVK-DPR-TKPLVDQYASNE  368 (368)
Q Consensus       340 ~~~glL~SD~~L~~-d~~-t~~~V~~yA~d~  368 (368)
                      .++|||+|||+|++ |++ |+.+|++||.||
T Consensus       239 ~~~gll~SD~~L~~~d~~~t~~~V~~ya~~~  269 (306)
T 1pa2_A          239 SNDGLLQSDQELFSTTGSSTIAIVTSFASNQ  269 (306)
T ss_dssp             TTCCSSHHHHHHHHSTTCTHHHHHHHHHHCH
T ss_pred             cCceeehhhHHHHcCChHHHHHHHHHhcCCH
Confidence            99999999999999 999 999999999874

>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ...

Probab=100.00  E-value=2.7e-88  Score=655.41  Aligned_cols=265  Identities=35%  Similarity=0.639  Sum_probs=254.1

Q ss_pred             ccccccccccCchHHHHHHHHHhhhhccCCccchhhhhhhhhcccccCCCceeeeccCCCCcccccccccC-CCCcchhH
Q 039585          101 ALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFNVAERDSDINL-SLPGDAFD  179 (368)
Q Consensus       101 ~L~~~fY~~sCp~~e~iV~~~v~~~~~~~~~~a~~llRl~FHDc~v~GcDgSill~~~~~~~~E~~~~~N~-~l~~~~~~  179 (368)
                      +|+++||++|||++|.||++.|++.+.++++++++||||+||||||+||||||||+++.++.+|+++++|. ++  |||+
T Consensus         2 ~L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDcfv~GCDgSilld~t~~~~~E~~~~~N~~~~--rgf~   79 (309)
T 1gwu_A            2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSA--RGFP   79 (309)
T ss_dssp             CCBTTTTTTTCTTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTTSSSSGGGCCCCSSSCCGGGSTTTTTTC--CCHH
T ss_pred             CCccchhhCcCcCHHHHHHHHHHHHHHhCCccccchhheehhhhccCCCCceEEecCCCCccccccCccccccc--hhHH
Confidence            58999999999999999999999999999999999999999999999999999999887777899999997 77  9999


Q ss_pred             HHHHHHHHHHhhCCCCCcHHHHHHhhhhhHHHhcCCCCcccccCCcCCccccccCCCCCCCCCCCCHHHHHHHHHHCCCC
Q 039585          180 VVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFS  259 (368)
Q Consensus       180 ~i~~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~  259 (368)
                      +|+.||++||++||++|||||||+||||+||+++|||.|.|++||+|++++...+++++||.|+.++++|++.|++|||+
T Consensus        80 vid~iK~~le~~cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~  159 (309)
T 1gwu_A           80 VIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPGPFFTLPQLKDSFRNVGLN  159 (309)
T ss_dssp             HHHHHHHHHHHHSTTTSCHHHHHHHHHHHHHHHTTCCCCCCCBCCBBCSSCCHHHHHHHSCCTTCCHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHhhCCCcccHHHHHHHHHHHHHHhcCCCccCCcCCCCCCCCCcccccccCCCCCccCHHHHHHHHHHcCCC
Confidence            99999999999999999999999999999999999999999999999999987777778999999999999999999999


Q ss_pred             -hhhhhhhcccceeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCCCCccchhhhhhc
Q 039585          260 -IQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGL  338 (368)
Q Consensus       260 -~~dlVaLsGaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~l  338 (368)
                       .+||||||||||||++||.+|.+|||||+|++++||+||+.|++.|++.||+++ +++..+.||..||.+|||+||+||
T Consensus       160 ~~~d~VaLsGaHTiG~ahc~~f~~Rlynf~g~~~~Dp~~~~~~~~~L~~~Cp~~g-~~~~~~~~D~~tp~~FDn~Yy~~l  238 (309)
T 1gwu_A          160 RSSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNG-NLSALVDFDLRTPTIFDNKYYVNL  238 (309)
T ss_dssp             CHHHHHHHHGGGGSCEEEGGGGHHHHHCGGGSSSCCTTSCHHHHHHHHHHSCTTS-CTTCEEESCSSCTTCCSTHHHHHH
T ss_pred             chhhheeeeccceeeeccccccccccccCCCCCCCCccccHHHHHHHHhhCCCCC-CCcccccCCCCCCccccHHHHhhh
Confidence             999999999999999999999999999999988999999999999999999765 556678899999999999999999


Q ss_pred             cccccccccchhccc-CCC--hHHHHHHhhhCC
Q 039585          339 PRGLGLLRVDNMLVK-DPR--TKPLVDQYASNE  368 (368)
Q Consensus       339 l~~~glL~SD~~L~~-d~~--t~~~V~~yA~d~  368 (368)
                      +.++|||+|||+|++ |++  |+.+|++||.||
T Consensus       239 ~~~~gll~SD~~L~~~d~~~~t~~~V~~ya~~~  271 (309)
T 1gwu_A          239 EEQKGLIQSDQELFSSPNATDTIPLVRSFANST  271 (309)
T ss_dssp             HTTCCSSHHHHHHHHSTTTTTHHHHHHHHHHCH
T ss_pred             hccccchhhhhhhhcCCCchhHHHHHHHhcCCH
Confidence            999999999999999 999  999999999875

>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1

Probab=100.00  E-value=5e-87  Score=644.56  Aligned_cols=261  Identities=41%  Similarity=0.693  Sum_probs=250.5

Q ss_pred             ccccccccccCchHHHHHHHHHhhhhccCCccchhhhhhhhhcccccCCCceeeeccCCCCcccccccccC-CCCcchhH
Q 039585          101 ALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFNVAERDSDINL-SLPGDAFD  179 (368)
Q Consensus       101 ~L~~~fY~~sCp~~e~iV~~~v~~~~~~~~~~a~~llRl~FHDc~v~GcDgSill~~~~~~~~E~~~~~N~-~l~~~~~~  179 (368)
                      +|+++||+++||++|.||++.|++.+.++++++++||||+||||||+||||||||+++   .+|+++.+|. ++  |||+
T Consensus         1 ~L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDcfv~GcDgSill~~~---~~E~~~~~N~~~l--rgf~   75 (300)
T 1qgj_A            1 QLSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGA---DSEKLAIPNINSA--RGFE   75 (300)
T ss_dssp             CCBTTTTTTTCTTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTTBSSSGGGCCST---TCGGGSTTTTTTC--CCHH
T ss_pred             CCccchhcCcCcCHHHHHHHHHHHHHHhCCCCCccchheeeeecccCCCCceEeecCC---chhhcCccccccc--chHH
Confidence            5899999999999999999999999999999999999999999999999999999875   3799999997 77  9999


Q ss_pred             HHHHHHHHHHhhCCCCCcHHHHHHhhhhhHHHhcCCCCcccccCCcCCccccccCCCCCCCCCCCCHHHHHHHHHHCCCC
Q 039585          180 VVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFS  259 (368)
Q Consensus       180 ~i~~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~  259 (368)
                      +|+.||++||++||++|||||||+||||+||+++|||.|.|++||+|++++....++ +||.|+.++++|++.|++|||+
T Consensus        76 vid~iK~~le~~cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~~s~~~~~~-~lP~p~~~~~~l~~~F~~~Gl~  154 (300)
T 1qgj_A           76 VIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVALGRKDGLVANQNSAN-NLPSPFEPLDAIIAKFVAVNLN  154 (300)
T ss_dssp             HHHHHHHHHHHHSTTTSCHHHHHHHHHHHHHHTTTCCCCCCCBCCCBCSSCCHHHHT-TSCCTTSCHHHHHHHHHTTTCC
T ss_pred             HHHHHHHHHHhhCCCcccHHHHHHHHHhHHHHHcCCCcccccCCCCCCCCcCcchhh-cCCCcccCHHHHHHHHHHcCCC
Confidence            999999999999999999999999999999999999999999999999999888777 9999999999999999999999


Q ss_pred             hhhhhhhcccceeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCCCCccchhhhhhcc
Q 039585          260 IQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLP  339 (368)
Q Consensus       260 ~~dlVaLsGaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~ll  339 (368)
                      .+||||||||||||++||.+|.+|||||+|++++||+||+.|++.|++.||+++ +++..+.||..||.+|||+||+||+
T Consensus       155 ~~d~VaLsGaHTiG~ahc~~f~~Rlynf~g~~~~dp~~~~~~~~~L~~~Cp~~~-~~~~~~~~D~~tp~~FDn~Yy~~l~  233 (300)
T 1qgj_A          155 ITDVVALSGAHTFGQAKCAVFSNRLFNFTGAGNPDATLETSLLSNLQTVCPLGG-NSNITAPLDRSTTDTFDNNYFKNLL  233 (300)
T ss_dssp             HHHHHHHHGGGGSSEEEGGGTGGGTSCSSSSSCCCTTSCHHHHHHHHHHSCTTS-CTTCEEESSSSCSSSCSTHHHHHHH
T ss_pred             HHHheeeeccceeceecccccccccccCCCCCCCCCCcCHHHHHHHHhhCCCCC-CCCcccccCCCCCcccccHHHHHHh
Confidence            999999999999999999999999999999988999999999999999999755 5566788998899999999999999


Q ss_pred             ccccccccchhccc-CCC---hHHHHHHhhhCC
Q 039585          340 RGLGLLRVDNMLVK-DPR---TKPLVDQYASNE  368 (368)
Q Consensus       340 ~~~glL~SD~~L~~-d~~---t~~~V~~yA~d~  368 (368)
                      .++|||+|||+|+. |++   |+.+|++||.||
T Consensus       234 ~~~gll~SD~~L~~~d~~~~~t~~~v~~ya~~~  266 (300)
T 1qgj_A          234 EGKGLLSSDQILFSSDLAVNTTKKLVEAYSRSQ  266 (300)
T ss_dssp             TTCCSSHHHHHHHHSTTTTTTTHHHHHHHHHCH
T ss_pred             ccCcccHHHHHHHcCCCccccHHHHHHHHhcCH
Confidence            99999999999999 999   999999999874

>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1

Probab=100.00  E-value=3e-86  Score=637.10  Aligned_cols=258  Identities=36%  Similarity=0.675  Sum_probs=247.4

Q ss_pred             ccccccccccCchHHHHHHHHHhhhhccCCccchhhhhhhhhcccccCCCceeeeccCCCCcccccccccC-CCCcchhH
Q 039585          101 ALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFNVAERDSDINL-SLPGDAFD  179 (368)
Q Consensus       101 ~L~~~fY~~sCp~~e~iV~~~v~~~~~~~~~~a~~llRl~FHDc~v~GcDgSill~~~~~~~~E~~~~~N~-~l~~~~~~  179 (368)
                      +|+++||++|||++|+||++.|++.+.++++++++||||+||||||+||||||||+++.++.+|+++++|. +|  |||+
T Consensus         1 ~L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDcfv~GcDgSill~~t~~~~~E~~~~~N~~~l--rgf~   78 (294)
T 1sch_A            1 ELSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNFTGEKTAGPNANSI--RGFE   78 (294)
T ss_dssp             CCBTTTTTTTCTTHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHTTTSSSSGGGCCCBTTBCCSTTSTTTTTTC--CCHH
T ss_pred             CCCCccccCcCcCHHHHHHHHHHHHHHhCCCCCccccceeheecCCCCCCceeeccCCCCCcccccCccccccc--chHH
Confidence            58999999999999999999999999999999999999999999999999999999887777899999998 99  9999


Q ss_pred             HHHHHHHHHHhhCCCCCcHHHHHHhhhhhHHHhcCCCCcccccCCcCCccccccCCCCCCCCCCCCHHHHHHHHHHCCCC
Q 039585          180 VVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFS  259 (368)
Q Consensus       180 ~i~~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~  259 (368)
                      +|+.||++||+.||++|||||||+||||+||+++|||.|.|++||+|++++....++++||.|+.++++|++.|++|||+
T Consensus        79 vid~iK~~le~~cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~  158 (294)
T 1sch_A           79 VIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVLLGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFT  158 (294)
T ss_dssp             HHHHHHHHHHHHSTTTSCHHHHHHHHHHHHHHHTTCCCCCCCBCCBBCSCCCHHHHHHHSCCTTCCHHHHHHHHHTTTCC
T ss_pred             HHHHHHHHHHhhCCCcccHHHHHHHHhhhhhhhccCCcccccCCCCCCccccccccccCCCCccCCHHHHHHHHHHcCCC
Confidence            99999999999999999999999999999999999999999999999999987777678999999999999999999999


Q ss_pred             hhhhhhhcccceeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCCCCccchhhhhhcc
Q 039585          260 IQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLP  339 (368)
Q Consensus       260 ~~dlVaLsGaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~ll  339 (368)
                      .+||||||||||||++||.+|.+||||       ||+||+.|++.|++.||.++ +++..+.||..||++|||+||+||+
T Consensus       159 ~~d~VaLsGaHTiG~ahc~~f~~Rly~-------dp~~~~~~~~~L~~~Cp~~g-~~~~~~~lD~~tp~~FDn~Yy~~l~  230 (294)
T 1sch_A          159 TKELVTLSGAHTIGQAQCTAFRTRIYN-------ESNIDPTYAKSLQANCPSVG-GDTNLSPFDVTTPNKFDNAYYINLR  230 (294)
T ss_dssp             HHHHHHHHGGGGBCEEEHHHHHHHHHH-------CSSSCHHHHHHHHTTSCSSS-CTTCEEESCSSSTBSCSTHHHHHHH
T ss_pred             HHHhccccccceeceeccccccccccC-------CcccCHHHHHHHhccCCCCC-CCCccccCCccccccccHHHHHHHH
Confidence            999999999999999999999999997       89999999999999999754 4556788998899999999999999


Q ss_pred             ccccccccchhcccCCChHHHHHHhhhCC
Q 039585          340 RGLGLLRVDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       340 ~~~glL~SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                      .++|||+|||+|++|++|+.+|++||.||
T Consensus       231 ~~~gll~SD~~L~~d~~t~~~v~~ya~~~  259 (294)
T 1sch_A          231 NKKGLLHSDQQLFNGVSTDSQVTAYSNNA  259 (294)
T ss_dssp             TTCCSSHHHHHTSSSSTTHHHHHHHHHCH
T ss_pred             cCCcccHHHHHHHcCccHHHHHHHHhhCH
Confidence            99999999999999999999999999874

>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1

Probab=100.00  E-value=9.2e-85  Score=630.69  Aligned_cols=264  Identities=38%  Similarity=0.710  Sum_probs=248.2

Q ss_pred             CCcccccccccccCchHHHHHHHHHhhhhccCCccchhhhhhhhhcccccCCCceeeeccCCCCcccccccccCCCCcch
Q 039585           98 AKPALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFNVAERDSDINLSLPGDA  177 (368)
Q Consensus        98 ~~~~L~~~fY~~sCp~~e~iV~~~v~~~~~~~~~~a~~llRl~FHDc~v~GcDgSill~~~~~~~~E~~~~~N~~l~~~~  177 (368)
                      ...+|+++||+++||++|+||++.|++.+.++++++++||||+||||||+||||||||+++.++.+|+++++|.+|..||
T Consensus         5 ~~~~L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDcfv~GcDgSilld~t~~~~~E~~~~~N~~ls~rg   84 (309)
T 1bgp_A            5 VAPGLSFDFYWQTCPRAESIVREFVQEAVRKDIGLAAGLLRLHFHDCFVQGCDASVLLDGSATGPGEQQAPPNLTLRPSA   84 (309)
T ss_dssp             CCTTCBTTTTTTTCTTHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHTTSSSSGGGSTTSTTSTTCCSSCGGGCCCHHH
T ss_pred             cccCccCChhhCcCcCHHHHHHHHHHHHHHhCCCccccccceEeeecccCCCCeeEEecCCCCCcccccCcccccccchh
Confidence            34579999999999999999999999999999999999999999999999999999999887777899999998543399


Q ss_pred             hHHHHHHHHHHHhhC-CCCCcHHHHHHhhhhhHHHhcCCCCcccccCCcCC-ccccccCCCCCCCCCCCCHHHHHHHHHH
Q 039585          178 FDVVIKIKNALEDAC-PGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDG-LVSQAARIPGNLPTNNMTMDEILKMFAS  255 (368)
Q Consensus       178 ~~~i~~iK~~le~~c-p~~VScADilalAa~~av~~~GGP~~~v~~GR~D~-~~s~~~~~~~~lP~p~~~~~~l~~~F~~  255 (368)
                      |++|+.||++||++| |++|||||||+||||+||+++|||.|.|++||+|+ +++...+++++||+++.++++|++.|++
T Consensus        85 ~~vi~~iK~~le~~c~p~~VScADilalAardav~~~GGP~~~v~~GR~D~~~~s~~~~~~~~lP~p~~~~~~l~~~F~~  164 (309)
T 1bgp_A           85 FKAVNDIRDRLERECRGAVVSCSDILALAARDSVVVSGGPDYRVPLGRRDSRSFASTQDVLSDLPGPSSNVQSLLALLGR  164 (309)
T ss_dssp             HHHHHHHHHHHHHHHTSSCSCHHHHHHHHHHHHHHHTTCCCCCCCBCEEBCCSCCCHHHHHHHSCCTTCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccCCCcccHHHHHHHHHHHHHHhcCCCeecccCCCcCCcCCCCccccccCCCCCCCCHHHHHHHHHH
Confidence            999999999999999 99999999999999999999999999999999999 9987766777899999999999999999


Q ss_pred             CCCChhhhhhhcccceeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCCCCccchhhh
Q 039585          256 KGFSIQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYF  335 (368)
Q Consensus       256 ~Gl~~~dlVaLsGaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy  335 (368)
                      |||+.+||||||||||||++||.+|.+|+||     ++||+||+.|+..|++.||.+  ++++.+.||..||.+|||+||
T Consensus       165 ~Gl~~~d~VaLsGaHTiG~ahc~~f~~Rlyn-----~~dp~~~~~~~~~L~~~Cp~~--~~~~~~~~D~~tP~~FDn~Yy  237 (309)
T 1bgp_A          165 LGLDATDLVTISGGHTIGLAHCSSFEDRLFP-----RPDPTISPTFLSRLKRTCPAK--GTDRRTVLDVRTPNVFDNKYY  237 (309)
T ss_dssp             TTCCHHHHHHHGGGGGSCEEEGGGTGGGTSS-----SCCTTSCHHHHHHHHHHCSST--TCCCEEESCSSCTTSCSTHHH
T ss_pred             cCCCHHHhhhhhccceeeecccccccccccC-----CCCCccCHHHHHHHHhhCCCC--CCCcccccCccccccccchhh
Confidence            9999999999999999999999999999997     469999999999999999964  334567899889999999999


Q ss_pred             hhccccccccccchhcccCCChHHHHHHhhhCC
Q 039585          336 RGLPRGLGLLRVDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       336 ~~ll~~~glL~SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                      +||+.++|||+|||+|++|++|+.+|++||+||
T Consensus       238 ~~L~~~~gll~SD~~L~~d~~t~~~v~~yA~d~  270 (309)
T 1bgp_A          238 IDLVNREGLFVSDQDLFTNAITRPIVERFAQSQ  270 (309)
T ss_dssp             HHHHTTCCSSHHHHHHHHSTTTHHHHHHHHHCH
T ss_pred             hhcccCccccHHhHHHhcCccHHHHHHHHhcCH
Confidence            999999999999999999999999999999874

>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1

Probab=100.00  E-value=1.5e-61  Score=466.37  Aligned_cols=222  Identities=26%  Similarity=0.334  Sum_probs=194.9

Q ss_pred             hHHHHHHHHHhhhhccCCccchhhhhhhhhccc-----------ccCCCceeeeccCCCCcccccccccCCCCcchhHHH
Q 039585          113 DFEKIVREFVHQKQTQSPSTAAGALRVFMHDCF-----------VDGCDGSVLISSNAFNVAERDSDINLSLPGDAFDVV  181 (368)
Q Consensus       113 ~~e~iV~~~v~~~~~~~~~~a~~llRl~FHDc~-----------v~GcDgSill~~~~~~~~E~~~~~N~~l~~~~~~~i  181 (368)
                      .....|++.|++++. +.+++++||||+|||||           ++||||||||+      +|+++++|.+| .|||++|
T Consensus         6 ~d~~~vr~~i~~~~~-~~~~~a~llRL~FHDc~ty~~~~~~~~~~gGcDgSill~------~E~~~~~N~~l-~rg~~~i   77 (295)
T 1iyn_A            6 AQLKSAREDIKELLK-TKFCHPIMVRLGWHDAGTYNKNIEEWPQRGGANGSLRFD------VELKHGANAGL-VNALNLL   77 (295)
T ss_dssp             HHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHTTCCTTCCSTTTTCSSSSGGGSH------HHHTSGGGTTT-HHHHHHH
T ss_pred             HHHHHHHHHHHHHHh-CCCchHHHHHHHHHHHhccccccccccCCCCCCeeEEeh------hhccCccccCH-HHHHHHH
Confidence            345678899998764 57999999999999998           59999999996      69999999988 6999999


Q ss_pred             HHHHHHHHhhCCCCCcHHHHHHhhhhhHHHhcCCCCcccccCCcCCccccccCCCCCCCC--CCCCHHHHHHHHHHCCCC
Q 039585          182 IKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIPGNLPT--NNMTMDEILKMFASKGFS  259 (368)
Q Consensus       182 ~~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~--p~~~~~~l~~~F~~~Gl~  259 (368)
                      +.||+++|     .|||||||+||||+||+++|||.|.|++||+|++++....++++||.  +..++++|++.|++|||+
T Consensus        78 ~~iK~~~e-----~VScADilalAardaV~~~GGP~~~v~~GR~D~~~s~~~~~~~~LP~~~p~~~~~~l~~~F~~~Gl~  152 (295)
T 1iyn_A           78 KPIKDKYS-----GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVTEPEQCPEEGRLPDAGPPSPAQHLRDVFYRMGLN  152 (295)
T ss_dssp             HHHHHHCT-----TSCHHHHHHHHHHHHHHHTTCCCCCCCBCBCCCCSGGGSCCSCCSCCSSCSSHHHHHHHHHHHHTCC
T ss_pred             HHHHHHcC-----CCCHHHHHHHhccceeeeccCceeeeccCCCCCCccccccccccCCCCCCCCCHHHHHHHHHHcCCC
Confidence            99999996     49999999999999999999999999999999999988888889999  888999999999999999


Q ss_pred             hhhhhhhcccceeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCCCCccchhhhhhcc
Q 039585          260 IQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLP  339 (368)
Q Consensus       260 ~~dlVaLsGaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~ll  339 (368)
                      .+|||||+||||||++||    +|++    .+..|+.    |+    ..||... ++   ..++ .||.+|||+||+||+
T Consensus       153 ~~dmVaLsGaHTiG~ahc----~r~g----~~~~d~~----~~----~~cp~~~-~~---~~~~-~tp~~FDN~Yy~~l~  211 (295)
T 1iyn_A          153 DKEIVALSGAHTLGRSRP----DRSG----WGKPETK----YT----KDGPGAP-GG---QSWT-AQWLKFDNSYFKDIK  211 (295)
T ss_dssp             HHHHHHHHGGGGSCEECT----TTTS----CSCSCCT----TT----TTCSSSC-CS---EESS-TTTTSCSTHHHHHHH
T ss_pred             HHHheeeccccccchhhh----hhcC----CCCCCch----HH----hcCCCCC-CC---Cccc-cCccccchHHHHhhh
Confidence            999999999999999999    5663    2233443    33    6898532 11   1233 589999999999999


Q ss_pred             cccc----ccccchhcccCCChHHHHHHhhhCC
Q 039585          340 RGLG----LLRVDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       340 ~~~g----lL~SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                      .++|    ||+|||+|++|++|+.+|++||.||
T Consensus       212 ~~~g~~~~ll~SD~~L~~d~~t~~~V~~yA~~~  244 (295)
T 1iyn_A          212 ERRDEDLLVLPTDAALFEDPSFKVYAEKYAADP  244 (295)
T ss_dssp             HCCCTTSCCCHHHHHHHHSTTHHHHHHHHHHCH
T ss_pred             hcCCCcceecchhhhhhcCccHHHHHHHHhcCH
Confidence            9999    9999999999999999999999874

>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A*

Probab=100.00  E-value=1e-60  Score=502.24  Aligned_cols=251  Identities=21%  Similarity=0.223  Sum_probs=225.9

Q ss_pred             ccccccc-ccccCchHH-HHHHHHHhhhhccC--------Cccchhhhhhhhhcccc-------cCCC-ceeeeccCCCC
Q 039585          100 PALRADY-YKTTCPDFE-KIVREFVHQKQTQS--------PSTAAGALRVFMHDCFV-------DGCD-GSVLISSNAFN  161 (368)
Q Consensus       100 ~~L~~~f-Y~~sCp~~e-~iV~~~v~~~~~~~--------~~~a~~llRl~FHDc~v-------~GcD-gSill~~~~~~  161 (368)
                      ..|..+| |.++|+.++ .+|++.|++.+.++        .++++.||||+||||||       +||| |||++.     
T Consensus        56 ~pl~~~f~Y~~~~~~~d~~~Vk~~v~~~~~~~~~~wpad~~~~~~~liRL~fHDc~t~~~sd~~gG~dggsi~~~-----  130 (740)
T 2cca_A           56 DPMGAAFDYAAEVATIDVDALTRDIEEVMTTSQPWWPADYGHYGPLFIRMAWHAAGTYRIHDGRGGAGGGMQRFA-----  130 (740)
T ss_dssp             CTTCTTCCHHHHHTTCCHHHHHHHHHHHHTSCCTTSCCGGGCCHHHHHHHHHHHHTTCCTTTCCCSSTTCGGGST-----
T ss_pred             CCCCcccchhhccCchHHHHHHHHHHHHHhcccccccccCCccHHHHHHHHHhhcccccccCCCCCCCCcccccc-----
Confidence            3488999 999999998 99999999999988        79999999999999998       7999 899984     


Q ss_pred             cccccccccCCCCcchhHHHHHHHHHHHhhCCCCCcHHHHHHhhhhhHHHhcCCCCcccccCCcCCcccccc--------
Q 039585          162 VAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAA--------  233 (368)
Q Consensus       162 ~~E~~~~~N~~l~~~~~~~i~~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~--------  233 (368)
                       +|+++++|.+| .+||++|+.||+++    |++|||||||+||||+||+++|||.|.|.+||+|++++...        
T Consensus       131 -~E~~~~~N~~l-~~~~~~i~~iK~k~----p~~VScADilaLAar~Av~~~Ggp~~~~~~GR~D~~~~~~~~wg~e~~~  204 (740)
T 2cca_A          131 -PLNSWPDNASL-DKARRLLWPVKKKY----GKKLSWADLIVFAGNCALESMGFKTFGFGFGRVDQWEPDEVYWGKEATW  204 (740)
T ss_dssp             -TGGGCGGGTTH-HHHHHTTHHHHHHH----GGGSCHHHHHHHHHHHHHHHTTCCCSCCCBCCCCCSSCCCCCCCSCSST
T ss_pred             -hhccCccccch-HHHHHHHHHHHHhc----cCCccHHHHHHHHHHHHHHHcCCCccCCCCCCCCCccccccccCccccc
Confidence             69999999998 69999999999998    78999999999999999999999999999999999887541        


Q ss_pred             ----------C----------------CC--CCCCCCCCCHHHHHHHHHHCCCChhhhhhh-cccceecccccccccccc
Q 039585          234 ----------R----------------IP--GNLPTNNMTMDEILKMFASKGFSIQEYVAL-MGAHTIGFAHCKEFSDRL  284 (368)
Q Consensus       234 ----------~----------------~~--~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaL-sGaHtiG~~hc~~f~~Rl  284 (368)
                                +                ++  .+||+|..++++|++.|++||||.+||||| +||||||++||.+|.+||
T Consensus       205 ~~~~r~~~~~~l~~p~~a~~mgliyvnpeg~~~lP~P~~s~~~l~~~F~r~Gln~~E~VALisGaHTiG~ahc~~~~~rl  284 (740)
T 2cca_A          205 LGDERYSGKRDLENPLAAVQMGLIYVNPEGPNGNPDPMAAAVDIRETFRRMAMNDVETAALIVGGHTFGKTHGAGPADLV  284 (740)
T ss_dssp             TCCCCEETTTEECTTCCSSSTTCSSSCTTSGGGCCCHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSCCCCBSSCGGGB
T ss_pred             cccccccccccccccchhhcccccccccccccCCCCcccCHHHHHHHHHhcCCCHHHhhhhhcCcccchhhcccchhhcc
Confidence                      0                11  248999999999999999999999999999 799999999999999999


Q ss_pred             ccCCCCCCCCCCCCHHHHHHH--hhhcCCCCCCCcccccCCC---CCCCccchhhhhhcccc------------------
Q 039585          285 FKFAPNQPTDPELNPKYAEAL--KAACKNHEQNITMTAFNDV---MSPGKFDNSYFRGLPRG------------------  341 (368)
Q Consensus       285 ~~~~g~~~~dp~~~~~~~~~L--~~~Cp~~~~~~~~~~~lD~---~tp~~FDN~Yy~~ll~~------------------  341 (368)
                      +       +||++++.|++.|  ++.|+.+...++....||.   .||++|||+||++|+.+                  
T Consensus       285 ~-------~dp~~~~~~~~~lg~~~~c~~g~~~~~~~sgld~~wt~tP~~fDN~Yf~~L~~~~w~~~~sp~g~~qw~~~~  357 (740)
T 2cca_A          285 G-------PEPEAAPLEQMGLGWKSSYGTGTGKDAITSGIEVVWTNTPTKWDNSFLEILYGYEWELTKSPAGAWQYTAKD  357 (740)
T ss_dssp             C-------CCGGGSCGGGTTCCCCBCSTTSSGGGCBSSSCCCCCCSCTTSCSSHHHHHHHHSCEEEEECTTSCEEEEEGG
T ss_pred             C-------CCCccCHHHHHhhhhhccCCCCCCCCccccCCCccccCCCCcccHHHHHHHHhCccccccCCCcccccccCC
Confidence            3       6999999999997  9999864312445677773   79999999999999987                  


Q ss_pred             -----------------ccccccchhcccCCChHHHHHHhhhCC
Q 039585          342 -----------------LGLLRVDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       342 -----------------~glL~SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                                       +|||+|||+|+.|++|+++|++||.|+
T Consensus       358 ~~~~~~~p~~~~~~~~~~~mL~SD~aL~~Dp~~~~iv~~fa~d~  401 (740)
T 2cca_A          358 GAGAGTIPDPFGGPGRSPTMLATDLSLRVDPIYERITRRWLEHP  401 (740)
T ss_dssp             GTTTTCBCCTTSCCCBCCEECHHHHHHHHSHHHHHHHHHHHHCH
T ss_pred             ccccccCCccccCCCCCcccchhhHHHhcCCcHHHHHHHHhhCH
Confidence                             699999999999999999999999885

>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3

Probab=100.00  E-value=2.4e-60  Score=498.33  Aligned_cols=251  Identities=20%  Similarity=0.227  Sum_probs=225.5

Q ss_pred             ccccccc-ccccCchHHHHHHHHHhhhhccC--------Cccchhhhhhhhhcccc-------cCCC-ceeeeccCCCCc
Q 039585          100 PALRADY-YKTTCPDFEKIVREFVHQKQTQS--------PSTAAGALRVFMHDCFV-------DGCD-GSVLISSNAFNV  162 (368)
Q Consensus       100 ~~L~~~f-Y~~sCp~~e~iV~~~v~~~~~~~--------~~~a~~llRl~FHDc~v-------~GcD-gSill~~~~~~~  162 (368)
                      ..|..+| |+++||.+|.+|++.|++.+.++        .++++.+|||+||||||       +||| |||++.      
T Consensus        43 ~pl~~~f~Y~~~c~~~d~~Vr~~v~~~~~~~~~~wp~d~~~~g~~liRLafHd~~t~~~~dg~gG~dggsirf~------  116 (720)
T 1ub2_A           43 NPMGPDFNYQEEVQKLDAALKQDLQALMTDSQDWWPADWGHYGGLMIRLTWHAAGTYRIADGRGGAGTGNQRFA------  116 (720)
T ss_dssp             CCSCTTCCHHHHHTTSCSTTHHHHHHHTTCCCTTSCCGGGCCHHHHHHHHHHHHTTCCTTTCCCSSTTCGGGST------
T ss_pred             CCCCCCcChhhhcCCHHHHHHHHHHHHHhcccccccccCCccHHHHHHHHHhhhccccCcCCCCCCCccccccc------
Confidence            4588999 99999999999999999999988        69999999999999998       7999 888874      


Q ss_pred             ccccccccCCCCcchhHHHHHHHHHHHhhCCCCCcHHHHHHhhhhhHHHhcCCCCcccccCCcCCcccccc---------
Q 039585          163 AERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAA---------  233 (368)
Q Consensus       163 ~E~~~~~N~~l~~~~~~~i~~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~---------  233 (368)
                      +|+++++|.+| .+||++|+.||+++    |++|||||||+||||+||+++|||.|.|.+||+|++++...         
T Consensus       117 ~E~~~~~N~~l-~~a~~~l~~iK~k~----p~~VScADilaLAg~~Av~~~Ggp~~~~~~GR~D~~~~~~~~~~g~e~~~  191 (720)
T 1ub2_A          117 PLNSWPDNTNL-DKARRLLWPIKQKY----GNKLSWADLIAYAGTIAYESMGLKTFGFAFGREDIWHPEKDIYWGPEKEW  191 (720)
T ss_dssp             TGGGCGGGTTH-HHHHHHTHHHHHHH----GGGSCHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCSSCCTTCCCCSCSSS
T ss_pred             hhccCccccCH-HHHHHHHHHHHHHc----cCCccHHHHHHHHHHHHHHHcCCCccCCCCCCCCCCCcccccccccchhc
Confidence            69999999998 69999999999998    78999999999999999999999999999999999887542         


Q ss_pred             -----C--------------------------C--CCCCCCCCCCHHHHHHHHHHCCCChhhhhhh-cccceeccccccc
Q 039585          234 -----R--------------------------I--PGNLPTNNMTMDEILKMFASKGFSIQEYVAL-MGAHTIGFAHCKE  279 (368)
Q Consensus       234 -----~--------------------------~--~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaL-sGaHtiG~~hc~~  279 (368)
                           .                          +  ..+||+|..++++|++.|++||||++||||| +||||||++||.+
T Consensus       192 ~~~~~~~~~r~~~~~~~~~p~~a~~~gliyvnpeG~~~lP~P~~~~~~lr~~F~r~Gln~~E~VALisGaHTiG~ahc~~  271 (720)
T 1ub2_A          192 FPPSTNPNSRYTGDRELENPLAAVTMGLIYVNPEGVDGNPDPLKTAHDVRVTFARMAMNDEETVALTAGGHTVGKCHGNG  271 (720)
T ss_dssp             SCCSSSTTCSEETTTEECTTCCSSSTTCSSCCTTSBTTBCCHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSCCBCBCS
T ss_pred             cccccccccccccccccccchhhhhcccccccccccCCCCCCccCHHHHHHHHHHcCCCHHHHHhhccCcccchhhcccc
Confidence                 0                          0  1348999999999999999999999999999 7999999999999


Q ss_pred             cccccccCCCCCCCCCCCCHHHHHHH--hhhcCCCCCCCcccccCC---CCCCCccchhhhhh-cccc------------
Q 039585          280 FSDRLFKFAPNQPTDPELNPKYAEAL--KAACKNHEQNITMTAFND---VMSPGKFDNSYFRG-LPRG------------  341 (368)
Q Consensus       280 f~~Rl~~~~g~~~~dp~~~~~~~~~L--~~~Cp~~~~~~~~~~~lD---~~tp~~FDN~Yy~~-ll~~------------  341 (368)
                      |.+||.       +||++++.|++.|  ++.|+.+...++....||   +.||++|||+||+| |+.+            
T Consensus       272 ~~~rl~-------~dp~~~~~~~~~lg~~~~c~~~~~~~~~~sgld~~wt~tP~~fDN~Yf~~~L~~~~w~~~~spag~~  344 (720)
T 1ub2_A          272 NAALLG-------PEPEGADVEDQGLGWINKTQSGIGRNAVTSGLEGAWTPHPTQWDNGYFAVCSLNYDWELKKNPAGAW  344 (720)
T ss_dssp             CSTTBC-------CCGGGSCGGGTTCCSCBCSSCCSGGGCBSSSCCBBSSSCTTSCSSTTTTTTTSSSCEEEEECTTSCE
T ss_pred             hhhcCC-------CCcccCHHHHhhhHHhhcCCCCCCCCccccCCCCCCCCCcccccHHHHhhhhhcccceeccCCCccc
Confidence            999992       6999999999996  899996431244566777   37999999999999 9876            


Q ss_pred             ------------------------ccccccchhcccCCChHHHHHHhhhCC
Q 039585          342 ------------------------LGLLRVDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       342 ------------------------~glL~SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                                              +|||+|||+|+.|++|+++|++||.|+
T Consensus       345 qw~~~~~~~~~~~p~~~d~~~~~~~~ml~SD~aL~~Dp~~~~iv~~fa~d~  395 (720)
T 1ub2_A          345 QWEPINPREEDLPVDVEDPSIRRNLVMTDADMAMKMDPEYRKISERFYQDP  395 (720)
T ss_dssp             EEEESSCCGGGSCBCSSCTTSBCCBCBCHHHHHHHHSHHHHHHHHHHHHCH
T ss_pred             ccccCCccccccCCcccCCccccCceechhhHHHhcCCcHHHHHHHHHhCH
Confidence                                    699999999999999999999999885

>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ...

Probab=100.00  E-value=1.6e-59  Score=444.21  Aligned_cols=204  Identities=31%  Similarity=0.385  Sum_probs=178.5

Q ss_pred             HHHHHHHhhhhccCCccchhhhhhhhhcccccCCCceeeeccCCC---CcccccccccCCCCcchhHHHHHHHHHHHhhC
Q 039585          116 KIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAF---NVAERDSDINLSLPGDAFDVVIKIKNALEDAC  192 (368)
Q Consensus       116 ~iV~~~v~~~~~~~~~~a~~llRl~FHDc~v~GcDgSill~~~~~---~~~E~~~~~N~~l~~~~~~~i~~iK~~le~~c  192 (368)
                      +.|++.|++. .++++++++||||+|||||  |||+|+++.+..+   +.+|+++++|.+| .+||++|+.||+++    
T Consensus        28 ~~~r~~v~~~-~~d~~~aa~llRL~FHDc~--gcD~s~~~gg~~gsi~~~~E~~~~~N~~l-~~g~~~i~~iK~~~----   99 (261)
T 2vcn_A           28 EKAKKKLRGF-IAEKRCAPLMLRLAAHSAG--TFDKGTKTGGPFGTIKHPAELAHSANNGL-DIAVRLLEPLKAEF----   99 (261)
T ss_dssp             CHHHHHHHHH-HHHHTCHHHHHHHHHHHHT--TCBTTTTBCSSSSGGGSHHHHTSGGGTTH-HHHHHHHHHHHHTC----
T ss_pred             HHHHHHHHHH-HhCCCchHHHHHHHHccCC--CCCcccCCCCCCccccchhhccCccccCH-HHHHHHHHHHHHHh----
Confidence            3466677766 5678999999999999998  7777766654332   2479999999998 46999999999998    


Q ss_pred             CCCCcHHHHHHhhhhhHHHhcCCCCcccccCCcCCccccccCCCCCCCCCCCCHHHHHHHH-HHCCCChhhhhhhcccce
Q 039585          193 PGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMF-ASKGFSIQEYVALMGAHT  271 (368)
Q Consensus       193 p~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F-~~~Gl~~~dlVaLsGaHt  271 (368)
                       ++|||||||+||||+||+++|||.|.|++||+|++++.   ++++||.++.++++|++.| ++|||+.+|||||+||||
T Consensus       100 -~~VScADilalAardaV~~~GGP~~~v~~GRrD~~~s~---~~~~lP~p~~~~~~l~~~F~~~~Gl~~~d~VaLsGaHT  175 (261)
T 2vcn_A          100 -PILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPP---PEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHT  175 (261)
T ss_dssp             -TTSCHHHHHHHHHHHHHHHTTCCCCCCCCCCCCCSSCC---CSCCSCCTTCCHHHHHHHHTTTTCCCHHHHHHHHGGGG
T ss_pred             -CCCCHHHHHHHHhhhheeeccCCcccCcCCCCCCCCCC---cccccCCcccCHHHHHHHHHhhCCCChHHheeeccCcc
Confidence             68999999999999999999999999999999999985   4578999999999999999 999999999999999999


Q ss_pred             eccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCCCCccchhhhhhcccc--cccc--cc
Q 039585          272 IGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLPRG--LGLL--RV  347 (368)
Q Consensus       272 iG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~ll~~--~glL--~S  347 (368)
                      ||++||.    | ++|.|.                               + ..||.+|||+||+||+.+  +|||  +|
T Consensus       176 iG~ahc~----r-~~f~g~-------------------------------~-~~tp~~FDN~Yy~~Ll~~~~~gll~L~S  218 (261)
T 2vcn_A          176 IGAAHKE----R-SGFEGP-------------------------------W-TSNPLIFDNSYFTELLSGEKEGLLQLPS  218 (261)
T ss_dssp             SCEECTT----T-TSCCEE-------------------------------S-SSCTTSCSTHHHHHHHHCCCTTCCCCHH
T ss_pred             ccccccc----C-CCCCCC-------------------------------C-CCcccccchHHHHHhhccCcCCcccchh
Confidence            9999993    4 455331                               1 258999999999999999  8986  99


Q ss_pred             chhcccCCChHHHHHHhhhCC
Q 039585          348 DNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       348 D~~L~~d~~t~~~V~~yA~d~  368 (368)
                      ||+|++|++|+.+|++||.||
T Consensus       219 D~~L~~d~~t~~~V~~ya~~~  239 (261)
T 2vcn_A          219 DKALLSDPVFRPLVDKYAADE  239 (261)
T ss_dssp             HHHHHHCTTHHHHHHHHHHCH
T ss_pred             hHHHhcCccHHHHHHHHhhCH
Confidence            999999999999999999875

>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3

Probab=100.00  E-value=4e-60  Score=497.27  Aligned_cols=252  Identities=21%  Similarity=0.275  Sum_probs=222.6

Q ss_pred             ccccccc-ccccCchHH-HHHHHHHhhhhccC--------Cccchhhhhhhhhcccc-------cCCC-ceeeeccCCCC
Q 039585          100 PALRADY-YKTTCPDFE-KIVREFVHQKQTQS--------PSTAAGALRVFMHDCFV-------DGCD-GSVLISSNAFN  161 (368)
Q Consensus       100 ~~L~~~f-Y~~sCp~~e-~iV~~~v~~~~~~~--------~~~a~~llRl~FHDc~v-------~GcD-gSill~~~~~~  161 (368)
                      ..|..+| |.++|+.++ .+|++.|++.+..+        .++++.+|||+||||||       +||| |||+|.     
T Consensus        44 ~pl~~~f~Y~~~~~~~d~~~vk~~v~~~~~~~~~~wp~d~~~~g~~liRlafHd~~t~~~sd~~gG~dggsir~~-----  118 (731)
T 1itk_A           44 GPVEDDFDYAEEFQKLDLEAVKSDLEELMTSSQDWWPADYGHYGPLFIRMAWHSAGTYRTADGRGGAAGGRQRFA-----  118 (731)
T ss_dssp             SSCCTTCCHHHHHHHCCHHHHHHHHHHHHTCCBTTBCCGGGCCHHHHHHHHHHHHTTCCTTTCCCSSTTCGGGST-----
T ss_pred             CCCCCCcchhhhcchHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHhhhccccCcCCCCCCCCccccch-----
Confidence            3488999 999999998 99999999999987        59999999999999999       7999 778774     


Q ss_pred             cccccccccCCCCcchhHHHHHHHHHHHhhCCCCCcHHHHHHhhhhhHHHhcCCCCcccccCCcCCcccccc--------
Q 039585          162 VAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAA--------  233 (368)
Q Consensus       162 ~~E~~~~~N~~l~~~~~~~i~~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~--------  233 (368)
                       +|+++++|.+| .+++++|+.||+++    +++|||||||+||||+||+++|||.|.|.+||+|++++...        
T Consensus       119 -~e~~~~~N~~l-~~~~~~l~~iK~~~----~~~VS~ADli~lAg~~Av~~~Ggp~~~~~~GR~D~~~~~~~~~~g~e~~  192 (731)
T 1itk_A          119 -PINSWPDNANL-DKARRLLLPIKQKY----GQKISWADLMILAGNVAIESMGFKTFGYAGGREDAFEEDKAVNWGPEDE  192 (731)
T ss_dssp             -TGGGCGGGTTH-HHHHHHTHHHHHHH----GGGSCHHHHHHHHHHHHHHHTTCCCSCCCBCCCCCSSCCTTCCCCSCSS
T ss_pred             -hhccCccccch-HHHHHHHHHHHHhc----cCCccHHHHHHHHHHHHHHHcCCCccCCCCCCCCCcccccccccccccc
Confidence             69999999998 68999999999998    77999999999999999999999999999999999887543        


Q ss_pred             -----------------------------CCCCCCCCCCCCHHHHHHHHHHCCCChhhhhhh-cccceeccccccccccc
Q 039585          234 -----------------------------RIPGNLPTNNMTMDEILKMFASKGFSIQEYVAL-MGAHTIGFAHCKEFSDR  283 (368)
Q Consensus       234 -----------------------------~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaL-sGaHtiG~~hc~~f~~R  283 (368)
                                                   +...+||+|..++++|++.|++||||++||||| +||||||++||.+|.+|
T Consensus       193 ~~~~~r~~~~~~l~~p~~a~~mgli~vnpeg~~~lP~P~~s~~~l~~~F~r~Gln~~E~VALisGaHTiG~ahc~~~~~r  272 (731)
T 1itk_A          193 FETQERFDEPGEIQEGLGASVMGLIYVNPEGPDGNPDPEASAKNIRQTFDRMAMNDKETAALIAGGHTFGKVHGADDPEE  272 (731)
T ss_dssp             TTCCCSCSSTTCCCTTCSCSSTTCSSSCTTCGGGCCCHHHHHHHHHHHHHTTTCCHHHHHHHHHHHTTSCEECBSSCHHH
T ss_pred             cccccccccccccccccccccccccccccccccCCCCCccCHHHHHHHHHHcCCCHHHHHHhhccceeccccccccchhc
Confidence                                         011248999999999999999999999999999 79999999999999998


Q ss_pred             cccCCCCCCCCCCCCHHHHHHH--hhhcCCCCCCCcccccCC---CCCCCccchhhhhhcccc-----------------
Q 039585          284 LFKFAPNQPTDPELNPKYAEAL--KAACKNHEQNITMTAFND---VMSPGKFDNSYFRGLPRG-----------------  341 (368)
Q Consensus       284 l~~~~g~~~~dp~~~~~~~~~L--~~~Cp~~~~~~~~~~~lD---~~tp~~FDN~Yy~~ll~~-----------------  341 (368)
                      ++      ++||++++.|++.|  ++.|+.+...++....||   +.||++|||+||+||+.+                 
T Consensus       273 ~~------~~dp~~~~~~~~~lg~~~~c~~~~~~~~~~sgld~~wt~tP~~fDN~Yf~~L~~~~w~~~~spag~~qw~~~  346 (731)
T 1itk_A          273 NL------GPEPEAAPIEQQGLGWQNKNGNSKGGEMITSGIEGPWTQSPTEWDMGYINNLLDYEWEPEKGPGGAWQWAPK  346 (731)
T ss_dssp             HB------CCCGGGSCGGGTTCCCCBCC-------CBSSSCCEESSSSTTSCSSHHHHHHHHSCEEEEECTTSCEEEEES
T ss_pred             cc------CCCCccCHHHHhhhHHhhcCCCCCCCCCcccCCCCCCCCCcchhhHHHHHHHhhcccccccCCCcccccccC
Confidence            76      36999999999997  999986431244567787   479999999999999986                 


Q ss_pred             -------------------ccccccchhcccCCChHHHHHHhhhCC
Q 039585          342 -------------------LGLLRVDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       342 -------------------~glL~SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                                         +|||+|||+|+.|++|+++|++||.|+
T Consensus       347 ~~~~~~~~p~~~d~~~~~~~~mL~SD~aL~~Dp~~~~iv~~fa~d~  392 (731)
T 1itk_A          347 SEELKNSVPDAHDPDEKQTPMMLTTDIALKRDPDYREVMETFQENP  392 (731)
T ss_dssp             SSTTTTCEECSSCTTCEECCCBCHHHHHHHHSHHHHHHHHHHHHCH
T ss_pred             CccccccCCcccCCccccCceeehhhHHHhcCCcHHHHHHHHhhCH
Confidence                               699999999999999999999999885

>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A*

Probab=100.00  E-value=4.5e-56  Score=436.33  Aligned_cols=206  Identities=24%  Similarity=0.350  Sum_probs=184.7

Q ss_pred             HHHHHHHHHhhhhcc--CCccchhhhhhhhhccc----------ccCCCceeeeccCCCCcccccccccCCCCcchhHHH
Q 039585          114 FEKIVREFVHQKQTQ--SPSTAAGALRVFMHDCF----------VDGCDGSVLISSNAFNVAERDSDINLSLPGDAFDVV  181 (368)
Q Consensus       114 ~e~iV~~~v~~~~~~--~~~~a~~llRl~FHDc~----------v~GcDgSill~~~~~~~~E~~~~~N~~l~~~~~~~i  181 (368)
                      ++..|+++|++.+..  +...++.||||+|||||          +|||||||||+++    .|+++++|.+|  +  ++|
T Consensus        16 ~~~~V~~di~~~l~~~~~g~~a~~llRLafHDc~t~~~~~g~~~~gGcDGSill~~~----~Ek~~~~N~gL--~--~vi   87 (357)
T 3m5q_A           16 AFIPLAQDLQETIFQNECGEDAHEVIRLTFHDAIAISRSQGPKAGGGADGSMLLFPT----VEPNFSANNGI--D--DSV   87 (357)
T ss_dssp             THHHHHHHHHHHTTTTCCSHHHHHHHHHHHHHHHCCCTTTCGGGCCSSSCHHHHSTT----TGGGSGGGTTT--H--HHH
T ss_pred             cHHHHHHHHHHHHhcCCCchHHHHHHHHHHhhccccccccCCCCCCCCccccccCCc----cccCCccccCH--H--HHH
Confidence            577899999999875  67889999999999999          5899999998643    59999999999  4  999


Q ss_pred             HHHHHHHHhhCCCCCcHHHHHHhhhhhHHHh-cCCCCcccccCCcCCccccccCCCCCCCCCCCCHHHHHHHHHHCC-CC
Q 039585          182 IKIKNALEDACPGVVSCADILTASTRNLVVM-AGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKG-FS  259 (368)
Q Consensus       182 ~~iK~~le~~cp~~VScADilalAa~~av~~-~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~G-l~  259 (368)
                      +.||..+|+.|  +|||||||+|||++||+. +|||.|.|++||+|++++.   ++++||.++.++++|++.|+++| |+
T Consensus        88 d~lk~~~e~~~--~VScADiiaLAg~vAv~~~~GGP~~~v~~GR~Da~~~~---~~g~lP~p~~~~~~L~~~F~~~G~Ls  162 (357)
T 3m5q_A           88 NNLIPFMQKHN--TISAADLVQFAGAVALSNCPGAPRLEFLAGRPNKTIAA---VDGLIPEPQDSVTKILQRFEDAGGFT  162 (357)
T ss_dssp             HHHHHHHHHST--TSCHHHHHHHHHHHHHHTSTTCCCCCCEECCCSCCCCC---CTTCSCCTTCCHHHHHHHHHHHHCCC
T ss_pred             HHHHHHHHhcC--CCCHHHHHHHHHHHHHHHhcCCCCccccCCCcCCCcCC---CCCCCCCCCCCHHHHHHHHHHcCCCC
Confidence            99999999999  899999999999999995 6999999999999999875   35689999999999999999999 99


Q ss_pred             hhhhhhhcccceeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCCCCccchhhhhhcc
Q 039585          260 IQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLP  339 (368)
Q Consensus       260 ~~dlVaLsGaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~ll  339 (368)
                      .+|||||+||||||++||.               ||+++                    .+.|| .||++|||+||+||+
T Consensus       163 ~~EmVALsGaHTiG~ah~~---------------dp~~~--------------------g~~~d-~tP~~FDN~Yf~nLl  206 (357)
T 3m5q_A          163 PFEVVSLLASHSVARADKV---------------DQTID--------------------AAPFD-STPFTFDTQVFLEVL  206 (357)
T ss_dssp             HHHHHHHGGGGGGCEESSS---------------STTCS--------------------CEESS-SCTTSCSSHHHHHHT
T ss_pred             hHHHhhhcchhhcccccCC---------------CCCCC--------------------ccccC-CCCCccCHHHHHHHH
Confidence            9999999999999999972               44442                    13577 699999999999998


Q ss_pred             c---------------------------cccccccchhcccCCChHHHHHHhhhCC
Q 039585          340 R---------------------------GLGLLRVDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       340 ~---------------------------~~glL~SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                      .                           |+|||+||++|+.|++|+.+|+.||+||
T Consensus       207 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~lL~SD~~L~~d~~tr~~ve~yA~dq  262 (357)
T 3m5q_A          207 LKGVGFPGSANNTGEVASPLPLGSGSDTGEMRLQSDFALAHDPRTACIWQGFVNEQ  262 (357)
T ss_dssp             BCCCBCSSCSCCTTEECBSCCCCBTTBCCCCEEHHHHHHHHSTTTHHHHHHTTTCH
T ss_pred             hccccccccCcccccccccccccccccccccccccCHHHhcCccHHHHHHHHhhhH
Confidence            5                           4689999999999999999999999885

>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A*

Probab=100.00  E-value=4.8e-56  Score=434.40  Aligned_cols=200  Identities=26%  Similarity=0.407  Sum_probs=177.9

Q ss_pred             ccccccccc-cCchHHHHHHHHHhhhhccCCccchhhhhhhhhcccc-------------cCCCceeeeccCCCCccccc
Q 039585          101 ALRADYYKT-TCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFV-------------DGCDGSVLISSNAFNVAERD  166 (368)
Q Consensus       101 ~L~~~fY~~-sCp~~e~iV~~~v~~~~~~~~~~a~~llRl~FHDc~v-------------~GcDgSill~~~~~~~~E~~  166 (368)
                      +|+.+||++ +||++                  ++.||||+||||||             +||||||||+++    +|++
T Consensus        23 ~L~~~fy~~~sCp~~------------------~~~llRLafHDc~ty~~sd~~~g~~~~gGcDGSIlL~~~----~Ek~   80 (343)
T 1llp_A           23 DIQANMFHGGQCGAE------------------AHESIRLVFHDSIAISPAMEAKGKFGGGGADGSIMIFDT----IETA   80 (343)
T ss_dssp             HHHHHTSTTTCCSHH------------------HHHHHHHHHHHHTCCCHHHHHTTSCCCCSSSSHHHHTHH----HHTT
T ss_pred             HHHHhhhccCCCchh------------------HHHHHHHHHhhhhccccccccccccCCCCCCceeccCCc----cccC
Confidence            466666666 66654                  79999999999998             999999999743    6999


Q ss_pred             ccccCCCCcchhHHHHHHHHHHHhhCCCCCcHHHHHHhhhhhHHHhc-CCCCcccccCCcCCccccccCCCCCCCCCCCC
Q 039585          167 SDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMA-GGPRFNVSFGRKDGLVSQAARIPGNLPTNNMT  245 (368)
Q Consensus       167 ~~~N~~l~~~~~~~i~~iK~~le~~cp~~VScADilalAa~~av~~~-GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~  245 (368)
                      +.+|.+|  +  ++|+.||..+|+.   +|||||||+|||++||+.+ |||.|.|++||+|++++..   +++||.++.+
T Consensus        81 ~~~N~~L--~--~vi~~lk~~~e~~---~VScADiiaLAg~vav~~~~GGP~~~v~~GR~Da~~~~~---~g~lP~p~~~  150 (343)
T 1llp_A           81 FHPNIGL--D--EVVAMQKPFVQKH---GVTPGDFIAFAGAVALSNCPGAPQMNFFTGRKPATQPAP---DGLVPEPFHT  150 (343)
T ss_dssp             SGGGTTH--H--HHHHHHHHHHHHH---TCCHHHHHHHHHHHHHHTSTTCCCCCCEECCCCCSSCCC---SSCSCCTTSC
T ss_pred             CccccCH--H--HHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHhccCCCeeeCCCCCCCCCCcCc---cCCCCCCCCC
Confidence            9999999  5  9999999999998   7999999999999999977 9999999999999998854   4689999999


Q ss_pred             HHHHHHHHHHCC-CChhhhhhhcccceeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCC
Q 039585          246 MDEILKMFASKG-FSIQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDV  324 (368)
Q Consensus       246 ~~~l~~~F~~~G-l~~~dlVaLsGaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~  324 (368)
                      +++|++.|+++| |+.+|||||+||||||++|+               .||+|+                    .+.||.
T Consensus       151 ~~~L~~~F~~~G~Ls~~EmVaLsGaHTiG~a~~---------------~dp~~~--------------------g~~~d~  195 (343)
T 1llp_A          151 VDQIIARVNDAGEFDELELVWMLSAHSVAAVND---------------VDPTVQ--------------------GLPFDS  195 (343)
T ss_dssp             HHHHHHHHHHHHCCCHHHHHHHGGGGGGCEESS---------------SSTTCS--------------------CEESSS
T ss_pred             HHHHHHHHHHcCCCChHHheeeccccchhhhcc---------------CCCCcc--------------------ccccCC
Confidence            999999999999 99999999999999999984               245443                    246784


Q ss_pred             CCCCccchhhhhhccc-c-------------------ccccccchhcccCCChHHHHHHhhhCC
Q 039585          325 MSPGKFDNSYFRGLPR-G-------------------LGLLRVDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       325 ~tp~~FDN~Yy~~ll~-~-------------------~glL~SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                       ||.+|||+||+||+. +                   +|+|+||++|++|++|+.+|+.||+||
T Consensus       196 -tP~~FDN~Yf~nLl~~~~~~pg~~~~~g~~~~~~~~~~~l~SD~~L~~d~~t~~~v~~yA~d~  258 (343)
T 1llp_A          196 -TPGIFDSQFFVETQFRGTLFPGSGGNQGEVESGMAGEIRIQTDHTLARDSRTACEWQSFVGNQ  258 (343)
T ss_dssp             -CTTSCSSHHHHHTTBCCCBCSSCSCCTTEECBSSTTCCEEHHHHHHTTSTTTHHHHHTTTTCH
T ss_pred             -cccccchHHHHHHHhcCccccccCCCcccccccccccccchhhHHHHhCCchhHHHHHhccCH
Confidence             999999999999998 3                   789999999999999999999999874

>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A*

Probab=100.00  E-value=8e-56  Score=433.36  Aligned_cols=186  Identities=25%  Similarity=0.348  Sum_probs=168.7

Q ss_pred             chhhhhhhhhcccc-------------cCCCceeeeccCCCCcccccccccCCCCcchhHHHHHHHHHHHhhCCCCCcHH
Q 039585          133 AAGALRVFMHDCFV-------------DGCDGSVLISSNAFNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCA  199 (368)
Q Consensus       133 a~~llRl~FHDc~v-------------~GcDgSill~~~~~~~~E~~~~~N~~l~~~~~~~i~~iK~~le~~cp~~VScA  199 (368)
                      ++.||||+||||||             +||||||||+++    +|+++.+|.+|  +  ++|+.||..+|+.   +||||
T Consensus        47 a~~llRLafHDc~vy~~sd~~~g~~~~gGcDgSIll~~~----~Ek~~~~N~~L--~--~vi~~lk~~~e~~---~VScA  115 (344)
T 2e39_A           47 VRKILRIVFHDAIGFSPALTAAGQFGGGGADGSIIAHSN----IELAFPANGGL--T--DTIEALRAVGINH---GVSFG  115 (344)
T ss_dssp             HHHHHHHHHHHHTCCCHHHHHTTSCCCCSSSSHHHHTHH----HHTTSGGGTTC--H--HHHHHHHHHHHHH---TCCHH
T ss_pred             HHHHHHHHHhhhhcccccccccccCCCCCCCceeecCCc----cccCcccccCH--H--HHHHHHHHHHHHh---cCCHH
Confidence            78999999999999             999999999743    69999999999  5  9999999999988   79999


Q ss_pred             HHHHhhhhhHHHhc-CCCCcccccCCcCCccccccCCCCCCCCCCCCHHHHHHHHHHCCCChhhhhhhcccceecccccc
Q 039585          200 DILTASTRNLVVMA-GGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCK  278 (368)
Q Consensus       200 DilalAa~~av~~~-GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsGaHtiG~~hc~  278 (368)
                      |||+|||++||+.+ |||.|.|++||+|++++..   +++||.++.++++|++.|+++||+.+|||||+||||||++|+ 
T Consensus       116 DiiaLAg~vav~~~~GGP~~~v~~GR~Da~~~~~---~g~lP~p~~~~~~L~~~F~~~GLs~~EmVaLsGaHTiG~a~~-  191 (344)
T 2e39_A          116 DLIQFATAVGMSNCPGSPRLEFLTGRSNSSQPSP---PSLIPGPGNTVTAILDRMGDAGFSPDEVVDLLAAHSLASQEG-  191 (344)
T ss_dssp             HHHHHHHHHHHHTSTTCCCCCCEECCCSCCCCCC---SSCSCCTTSCHHHHHHHHHHHTCCHHHHHHHGGGGGSCEESS-
T ss_pred             HHHHHHHHHHHHHhccCCcccccCCCCCCCcCCc---ccCCCCCCCCHHHHHHHHHHcCCCHHHHHHhhcccchhhccc-
Confidence            99999999999977 9999999999999998864   468999999999999999999999999999999999999995 


Q ss_pred             ccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCCCCccchhhhhhcccc-cc--------------
Q 039585          279 EFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLPRG-LG--------------  343 (368)
Q Consensus       279 ~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~ll~~-~g--------------  343 (368)
                                    .||+++                    .+.|| .||.+|||+||+||+.+ +|              
T Consensus       192 --------------~d~~~~--------------------~~~~d-~tP~~fDN~Yf~nLl~~~~g~p~~~~~~ge~~~~  236 (344)
T 2e39_A          192 --------------LNSAIF--------------------RSPLD-STPQVFDTQFYIETLLKGTTQPGPSLGFAEELSP  236 (344)
T ss_dssp             --------------SCTTST--------------------TEESS-SCTTSCSTHHHHHHTBCCCBCCSSSCCTTEECBS
T ss_pred             --------------cCCCcc--------------------ccccC-CcccccchHHHHHHHhcccccccCCcccccccCC
Confidence                          144442                    13577 59999999999999976 66              


Q ss_pred             -----ccccchhcccCCChHHHHHHhhhCC
Q 039585          344 -----LLRVDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       344 -----lL~SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                           ||+||++|+.|++|+.+|+.||+||
T Consensus       237 ~~~~~~l~SD~~L~~d~~t~~~v~~yA~d~  266 (344)
T 2e39_A          237 FPGEFRMRSDALLARDSRTACRWQSMTSSN  266 (344)
T ss_dssp             STTCCEEHHHHHHHHSTTTHHHHHHTSSCH
T ss_pred             CccceeehhhhhhhcCccHHHHHHHhccCH
Confidence                 9999999999999999999999874

>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* 4ged_A*

Probab=100.00  E-value=1.2e-55  Score=421.28  Aligned_cols=208  Identities=27%  Similarity=0.359  Sum_probs=182.6

Q ss_pred             HHHHHHHHhhhhccCCccchhhhhhhhh-----cccccCCCceeeeccCCCCcccccccccCCCCcchhHHHHHHHHHHH
Q 039585          115 EKIVREFVHQKQTQSPSTAAGALRVFMH-----DCFVDGCDGSVLISSNAFNVAERDSDINLSLPGDAFDVVIKIKNALE  189 (368)
Q Consensus       115 e~iV~~~v~~~~~~~~~~a~~llRl~FH-----Dc~v~GcDgSill~~~~~~~~E~~~~~N~~l~~~~~~~i~~iK~~le  189 (368)
                      ..+|++.|++.+..+++++++||||+||     |||++  |||+.- .+.++.+|+++++|.||     ++|+.+|+.||
T Consensus         9 ~~~vr~~v~~~~~~~~~~~a~llRl~fH~a~t~dc~~~--~gg~~g-~~~~~~~E~~~~~N~gl-----~~i~~~~~~i~   80 (271)
T 3riv_A            9 IRALRADIEDMISEKLELGPSLIRLAWHEAASYDCFKK--DGSPNS-ASMRFKPECLYAGNKGL-----DIPRKALETLK   80 (271)
T ss_dssp             HHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTCBTTTT--BSCTTT-TGGGSTTGGGSGGGTTT-----HHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCchHHHHHHHHHhcccCCCCCCC--CCCCCc-cccccccccccccccCH-----HHHHHHHHHHH
Confidence            4579999999999999999999999999     99985  454411 11123479999999865     89999999999


Q ss_pred             hhCCCCCcHHHHHHhhhhhHHHhcCCCCcccccCCcCCccccccCCCCCCCCCCCCHHHHHHHHHHCCCChhhhhhhccc
Q 039585          190 DACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGA  269 (368)
Q Consensus       190 ~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsGa  269 (368)
                      ++||+ |||||||+||||+||+++|||.|.|++||+|++++....++++||.++.++++|++.|+++||+.+|||||+||
T Consensus        81 ~~cp~-VScADiiaLAardaV~~~gGp~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~GL~~~emVaLsGa  159 (271)
T 3riv_A           81 KKYPQ-ISYADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGSVCGPDGRLPDGSKTQSHVREVFRRLGFNDQETVALIGA  159 (271)
T ss_dssp             HHCTT-SCHHHHHHHHHHHHHHHTTCCCCCCEECCCCCSSGGGCCCTTCSCCTTSCHHHHHHHHHHHTCCHHHHHHHHGG
T ss_pred             hcCCC-CCHHHHHHHHHHHHHHhccCCCcCCCCCccCcccccccCccCCCCCCCCCHHHHHHHHHHcCCCHHHHhhhccc
Confidence            99995 99999999999999999999999999999999998888888899999999999999999999999999999999


Q ss_pred             ceeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCCCCccchhhhhhccccc-------
Q 039585          270 HTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLPRGL-------  342 (368)
Q Consensus       270 HtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~ll~~~-------  342 (368)
                      ||||++||..     ++|.|                    +           + ..||.+|||+||+||+.++       
T Consensus       160 HTiG~~~~~~-----~~~~g--------------------~-----------~-~~tp~~fdn~yf~~Ll~~~w~~~~~~  202 (271)
T 3riv_A          160 HTCGECHIEF-----SGYHG--------------------P-----------W-THDKNGFDNSFFTQLLDEDWVLNPKV  202 (271)
T ss_dssp             GGSCEECHHH-----HSCCE--------------------E-----------S-SSCTTCCSTHHHHHHHHSCEEECTTC
T ss_pred             eecccccccc-----CCCCC--------------------C-----------C-CCCCCccCHHHHHHHHhccCCcCCCC
Confidence            9999999964     23322                    1           1 1478899999999998876       


Q ss_pred             -------------cccccchhcccCCChHHHHHHhhhCC
Q 039585          343 -------------GLLRVDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       343 -------------glL~SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                                   |||+|||+|+.|++|+.+|+.||.||
T Consensus       203 ~~~~~~d~~t~~~~ll~SD~~L~~d~~t~~~v~~yA~~~  241 (271)
T 3riv_A          203 EQMQLMDRATTKLMMLPSDVCLLLDPSYRKYVELYAKDN  241 (271)
T ss_dssp             SSCCEEETTTSCCEECHHHHHHHHSHHHHHHHHHHHHCH
T ss_pred             CcccccccCCCcceeecccHHHhcChhHHHHHHHHhhCH
Confidence                         79999999999999999999999884

>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* 4fcn_A* 4g05_A* 4fcs_A* 4fef_A* 4fdq_A*

Probab=100.00  E-value=2.8e-55  Score=427.25  Aligned_cols=205  Identities=25%  Similarity=0.355  Sum_probs=181.7

Q ss_pred             HHHHHHHHHhhhhccCCc---cchhhhhhhhhcccc-------cCCCceeeeccCCCCcccccccccCCCCcchhHHHHH
Q 039585          114 FEKIVREFVHQKQTQSPS---TAAGALRVFMHDCFV-------DGCDGSVLISSNAFNVAERDSDINLSLPGDAFDVVIK  183 (368)
Q Consensus       114 ~e~iV~~~v~~~~~~~~~---~a~~llRl~FHDc~v-------~GcDgSill~~~~~~~~E~~~~~N~~l~~~~~~~i~~  183 (368)
                      +|..|+++|++.+..+..   .++.||||+|||||+       |||||||||+++    +|+++.+|.+|  +  ++|+.
T Consensus        16 ~~~~v~~di~~~l~~~g~~g~~a~~llRLafHDc~ty~~~d~~gGcDgSill~~~----~Ek~~~~N~gL--~--~vid~   87 (331)
T 3fmu_A           16 ILFPILDDIQENLFDGAQCGEEVHESLRLTFHDAIGFSPTLGGGGADGSIIAFDT----IETNFPANAGI--D--EIVSA   87 (331)
T ss_dssp             GHHHHHHHHHHHTSTTTCSSHHHHHHHHHHHHHHTCCBTTTBCCSSSSHHHHTHH----HHTTSGGGTTH--H--HHHHH
T ss_pred             CHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhhcccccCCCCCCCCchhhhcCCc----ccccCccccCH--H--HHHHH
Confidence            578899999999987643   566999999999996       999999998532    59999999999  4  99999


Q ss_pred             HHHHHHhhCCCCCcHHHHHHhhhhhHHHh-cCCCCcccccCCcCCccccccCCCCCCCCCCCCHHHHHHHHHHCCCChhh
Q 039585          184 IKNALEDACPGVVSCADILTASTRNLVVM-AGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQE  262 (368)
Q Consensus       184 iK~~le~~cp~~VScADilalAa~~av~~-~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~d  262 (368)
                      ||..+|+.   +|||||||+|||++||+. +|||.|.|++||+|++++..   +++||.++.++++|++.|+++||+.+|
T Consensus        88 lk~~~e~~---~VScADiiaLAa~vav~~~~GGP~~~v~~GR~Da~~~~~---~g~lP~p~~~~~~L~~~F~~~Gls~~E  161 (331)
T 3fmu_A           88 QKPFVAKH---NISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASP---DHLVPEPFDSVDSILARMGDAGFSPVE  161 (331)
T ss_dssp             HHHHHHHS---SSCHHHHHHHHHHHHHHTSTTCCCCCCEECCCCCCSCCC---SSCSCCTTSCHHHHHHHHHHTTCCHHH
T ss_pred             HHHHHHHc---cCCHHHHHHHHHHHHHHHhcCCCceeeecCCCCCCCCCC---CCCCCCCCCCHHHHHHHHHHcCCChhH
Confidence            99999987   899999999999999995 79999999999999998753   468999999999999999999999999


Q ss_pred             hhhhcccceeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCCCCccchhhhhhccc-c
Q 039585          263 YVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLPR-G  341 (368)
Q Consensus       263 lVaLsGaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~ll~-~  341 (368)
                      ||||+||||||++||.               ||+++                    .+.|| .||.+|||+||+||+. +
T Consensus       162 mVaLsGaHTiG~ah~~---------------dp~~~--------------------g~~~d-~tP~~FDN~Yf~nLl~~~  205 (331)
T 3fmu_A          162 VVSLLASHSIAAADKV---------------DPSIP--------------------GTPFD-STPGVFDSQFFIETQLKG  205 (331)
T ss_dssp             HHHHGGGGGGCEESSS---------------STTST--------------------TEESS-SCTTSCSTHHHHHTTBCC
T ss_pred             hhheechhhcccccCC---------------CCCCC--------------------CCccC-CCCCcccHHHHHHHHhcC
Confidence            9999999999999962               44442                    13577 6999999999999985 4


Q ss_pred             c-------------------cccccchhcccCCChHHHHHHhhhCC
Q 039585          342 L-------------------GLLRVDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       342 ~-------------------glL~SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                      +                   +||+||++|+.|++|+.+|+.||+||
T Consensus       206 ~~~p~~~~~~~e~~d~~~g~~ll~SD~~L~~d~~tr~~v~~yA~d~  251 (331)
T 3fmu_A          206 RLFPGTADNKGEAQSPLQGEIRLQSDHLLARDPQTACEWQSMVNNQ  251 (331)
T ss_dssp             CBCSSCSCCTTEECBSSTTCCEEHHHHHHHHSTTTHHHHHHTTTCH
T ss_pred             ccccCCCCCcccccCCCCCCcccccChhhhcChhHHHHHHHHhhhH
Confidence            4                   49999999999999999999999885

>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15}

Probab=100.00  E-value=2.7e-56  Score=468.00  Aligned_cols=250  Identities=21%  Similarity=0.265  Sum_probs=219.8

Q ss_pred             cccccc-ccccCchHH-HHHHHHHhhhhccCC--------ccchhhhhhhhhccc-------ccCC-CceeeeccCCCCc
Q 039585          101 ALRADY-YKTTCPDFE-KIVREFVHQKQTQSP--------STAAGALRVFMHDCF-------VDGC-DGSVLISSNAFNV  162 (368)
Q Consensus       101 ~L~~~f-Y~~sCp~~e-~iV~~~v~~~~~~~~--------~~a~~llRl~FHDc~-------v~Gc-DgSill~~~~~~~  162 (368)
                      .|..+| |.+.|..+. ..|++.|++++....        ++++.+|||+||||+       +||| ||||+|+      
T Consensus        68 p~~~~f~y~~~~~~~d~~avk~di~~~~~~~~~~wp~d~g~~gp~lvRlawHdagTy~~~d~~GGanggsirf~------  141 (764)
T 3ut2_A           68 PLGGDFDYAEAFQSLDYEAVKKDIAALMTESQDWWPADFGNYGGLFVRMAXHSAGTYRAMDGRGGGGMGQQRFA------  141 (764)
T ss_dssp             TTCTTCCHHHHHHTSCHHHHHHHHHHHHTCCBTTBCCGGGCCHHHHHHHHHHHHTTCCTTTCCCSSTTCGGGST------
T ss_pred             CCCCCCcHHHHhhHHHHHHHHHHHHHHHhcccccccccccchHHHHHHHhhcccccccCCCCCCCCCCCeeecc------
Confidence            466777 888887774 889999999998764        889999999999995       5899 6899985      


Q ss_pred             ccccccccCCCCcchhHHHHHHHHHHHhhCCCCCcHHHHHHhhhhhHHHhcCCCCcccccCCcCCcccccc---------
Q 039585          163 AERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAA---------  233 (368)
Q Consensus       163 ~E~~~~~N~~l~~~~~~~i~~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~---------  233 (368)
                      .|+++++|.+| .++|++|+.||+++    |++|||||||+||||+||+++|||.|.|.+||+|++++...         
T Consensus       142 pE~~~~~N~gL-~~~~~~l~~IK~~~----p~~VScADLiaLAg~~AVe~~GGP~~~f~~GR~Da~~s~~~~~wg~e~~~  216 (764)
T 3ut2_A          142 PLNSWPDNQNL-DKARRLIWPIKQKY----GNKISWADLMLLTGNVALENMGFKTLGFGGGRADTWQSDEAVYWGAETTF  216 (764)
T ss_dssp             TGGGCGGGTTH-HHHHHHHHHHHHHH----GGGSCHHHHHHHHHHHHHHHTTCCCSCCCBCCCCCCSCCTTCCCCSCSSC
T ss_pred             cccCCccccCH-HHHHHHHHHHHHHh----cCCcCHHHHHHHHHHHHHHHcCCCccCCCCCCCCCCCCccccccCCcccc
Confidence            59999999998 68999999999998    77899999999999999999999999999999999887542         


Q ss_pred             ----------C------------------------C----CCCCCCCCCCHHHHHHHHHHCCCChhhhhhh-cccceecc
Q 039585          234 ----------R------------------------I----PGNLPTNNMTMDEILKMFASKGFSIQEYVAL-MGAHTIGF  274 (368)
Q Consensus       234 ----------~------------------------~----~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaL-sGaHtiG~  274 (368)
                                +                        +    ..+||+|..++++|++.|++||||++||||| +||||||+
T Consensus       217 ~~~~~~~r~~~~~~~~~~~~~l~~plaa~~mgliyvnpegp~glPdP~~sa~~lr~~F~rmGlnd~E~VALisGaHTiGk  296 (764)
T 3ut2_A          217 VPQGNDVRYNNSVDINARADKLEKPLAATHMGLIYVNPEGPNGTPDPAASAKDIREAFGRMGMNDTETVALIAGGHAFGK  296 (764)
T ss_dssp             TTSCCTTTTTTCCCTTTTGGGCCTTCCSSSTTCSSSCTTCGGGCCCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTSCC
T ss_pred             cccCCcccccccccccccccccccchhhhhcccccccccccCCCCCCCcCHHHHHHHHHHcCCCHHHHHHHhccCccccc
Confidence                      0                        0    0148999999999999999999999999999 79999999


Q ss_pred             ccccccccccccCCCCCCCCCCCCHHHHHHH--hhhcCCCCCCCcccccCCC---CCCCccchhhhhhcccc--------
Q 039585          275 AHCKEFSDRLFKFAPNQPTDPELNPKYAEAL--KAACKNHEQNITMTAFNDV---MSPGKFDNSYFRGLPRG--------  341 (368)
Q Consensus       275 ~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L--~~~Cp~~~~~~~~~~~lD~---~tp~~FDN~Yy~~ll~~--------  341 (368)
                      +||..|.+|||       +||++++.|.+.|  ++.|+.++..++....||.   .||++|||+||++|+.+        
T Consensus       297 aHc~~~~~rl~-------~dP~~~~~~~~~l~~~~~c~~g~g~~~~~sgld~~wt~tP~~fDN~Yf~~Ll~~~w~~~~~p  369 (764)
T 3ut2_A          297 THGAVKGSNIG-------PAPEAADLGMQGLGWHNSVGDGNGPNQMTSGLEVIWTKTPTKWSNGYLESLINNNWTLVESP  369 (764)
T ss_dssp             CCBCSCGGGBC-------CCGGGSCGGGTTCCCCBCSTTSSGGGCBSSSCCCCCSSCTTSCCSHHHHHHHHSCCEEEECT
T ss_pred             ccccchhhccC-------CCCccChHHHHhHHHHhhCCCCCCCCCccccCCCCCCCCCccccHHHHHHHhcCCcccccCC
Confidence            99999999995       4899998888764  8999865313445677886   79999999999999987        


Q ss_pred             --------------------------ccccccchhcccCCChHHHHHHhhhCC
Q 039585          342 --------------------------LGLLRVDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       342 --------------------------~glL~SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                                                +|||+|||+|+.|++|+++|++||.||
T Consensus       370 ~g~~qw~~~~~~~~~p~~~~~~~~~~~~mL~SD~aL~~Dp~t~~iv~~fa~d~  422 (764)
T 3ut2_A          370 AGAHQWEAVNGTVDYPDPFDKTKFRKATMLTSDLALINDPEYLKISQRWLEHP  422 (764)
T ss_dssp             TSCEEEECTTSCSCEEETTEEEEEECCEECHHHHGGGSSHHHHHHHHHHHHCH
T ss_pred             CcccccccCCccccCCcccCCcccccccccccCHHHhcCchHHHHHHHHhhCH
Confidence                                      799999999999999999999999985

>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A*

Probab=100.00  E-value=4.5e-56  Score=465.63  Aligned_cols=251  Identities=20%  Similarity=0.269  Sum_probs=216.9

Q ss_pred             cccccc-ccccCchH-HHHHHHHHhhhhccCC--------ccchhhhhhhhhccc-------ccCC-CceeeeccCCCCc
Q 039585          101 ALRADY-YKTTCPDF-EKIVREFVHQKQTQSP--------STAAGALRVFMHDCF-------VDGC-DGSVLISSNAFNV  162 (368)
Q Consensus       101 ~L~~~f-Y~~sCp~~-e~iV~~~v~~~~~~~~--------~~a~~llRl~FHDc~-------v~Gc-DgSill~~~~~~~  162 (368)
                      .|..+| |.+.|..+ ...|++.|++++....        .+++.+|||+||||+       +||| ||||+|+      
T Consensus        45 p~~~~f~y~~~~~~~d~~~vk~di~~~~~~~~~~wpad~g~~gp~lvRlawHdagTy~~~d~~GGanggsirf~------  118 (737)
T 3vli_A           45 PVEDDFDYAEEFQKLDLEAVKSDLEELMTSSQDWWPADYGHYGPLFIRMAWHSAGTYRTADGRGGAAGGRQRFA------  118 (737)
T ss_dssp             SCCTTCCHHHHHHHCCHHHHHHHHHHHHTCCBTTBCCGGGCCHHHHHHHHHHHHTTCCTTTCCSSSTTCGGGST------
T ss_pred             CCCCCCChHHHhccccHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHhccccccCCCCCCCCCeEecc------
Confidence            466677 77777665 4789999999998754        789999999999996       5899 5899986      


Q ss_pred             ccccccccCCCCcchhHHHHHHHHHHHhhCCCCCcHHHHHHhhhhhHHHhcCCCCcccccCCcCCcccccc---------
Q 039585          163 AERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAA---------  233 (368)
Q Consensus       163 ~E~~~~~N~~l~~~~~~~i~~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~---------  233 (368)
                      +|+++++|.+| .++|++|+.||+++    |++|||||||+||||+||+++|||.|.|.+||+|++++...         
T Consensus       119 pEk~~~~N~gL-~~~~~~le~IK~~~----p~~VScADLiaLAg~~AVe~~GGP~~~f~~GR~Da~~~~~~~~wg~e~~~  193 (737)
T 3vli_A          119 PINSWPDNANL-DKARRLLLPIKQKY----GQKISWADLMILAGNVAIESMGFKTFGYAGGREDAFEEDKAVNWGPEDEF  193 (737)
T ss_dssp             TGGGCGGGTTH-HHHHHHTHHHHHHH----GGGSCHHHHHHHHHHHHHHHTTCCCSCCCBCCCCCSSCCTTCCCCSCSST
T ss_pred             cccCCccccch-HHHHHHHHHHHHhc----cCCcCHHHHHHHHHHHHHHHcCCCccCCCCCCCCCccCccccccCCcccc
Confidence            59999999998 68999999999998    77899999999999999999999999999999999887642         


Q ss_pred             ----------C--------------CC----CCCCCCCCCHHHHHHHHHHCCCChhhhhhh-cccceecccccccccccc
Q 039585          234 ----------R--------------IP----GNLPTNNMTMDEILKMFASKGFSIQEYVAL-MGAHTIGFAHCKEFSDRL  284 (368)
Q Consensus       234 ----------~--------------~~----~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaL-sGaHtiG~~hc~~f~~Rl  284 (368)
                                +              ++    ..||+|..++++|++.|++||||++||||| +||||||++||..|.+|.
T Consensus       194 ~~~~r~~~~~~l~~plaa~~mgliyvnpegp~glPdP~~~~~~lr~~F~rmGlnd~E~VALisGaHTiGkaHc~~~~~~~  273 (737)
T 3vli_A          194 ETQERFDEPGEIQEGLGASVMGLIYVNPEGPDGNPDPEASAKNIRQTFDRMAMNDKETAALIAGGHTFGKVHGADDPEEN  273 (737)
T ss_dssp             TCCCSCSSTTCCCTTCSCSSTTSSSSCTTCGGGCCCHHHHHHHHHHHHHTTTCCHHHHHHHHHHHTTSCEECBSSCHHHH
T ss_pred             cccccccccccccccchhhhcccccccccccCCCCCCccCHHHHHHHHHHcCCCHHHHHHHHcCCCcCcccccccccccc
Confidence                      0              00    239999999999999999999999999999 799999999999998843


Q ss_pred             ccCCCCCCCCCCCCHHHHHHH--hhhcCCCCCCCcccccCC---CCCCCccchhhhhhccccc-----------------
Q 039585          285 FKFAPNQPTDPELNPKYAEAL--KAACKNHEQNITMTAFND---VMSPGKFDNSYFRGLPRGL-----------------  342 (368)
Q Consensus       285 ~~~~g~~~~dp~~~~~~~~~L--~~~Cp~~~~~~~~~~~lD---~~tp~~FDN~Yy~~ll~~~-----------------  342 (368)
                      .      ++||++++.|++.|  ++.|+.+...++..+.||   +.||++|||+||++|+.++                 
T Consensus       274 ~------~~dp~~~~~~~~~l~~~~~c~~g~g~~~~~sgld~~wt~tP~~fDN~Yf~~L~~~~W~~~~~p~g~~qw~~~~  347 (737)
T 3vli_A          274 L------GPEPEAAPIEQQGLGWQNKNGNSKGGEMITSGIEGPWTQSPTEWDMGYINNLLDYEWEPEKGPGGAWQWAPKS  347 (737)
T ss_dssp             B------CCCGGGSCGGGTTCCCCBCC---CCTTCBSSSCCEESSSSTTSCSSHHHHHHHHSCEEEEECTTSCEEEEESS
T ss_pred             C------CCCCCcCHHHHHhhHHhhcCCCCCCCCCccccCCCCCCCCCcccCHHHHHhHhcCceeeccCCCcccccccCC
Confidence            1      36999999999988  899986431455677888   5799999999999999876                 


Q ss_pred             -------------------cccccchhcccCCChHHHHHHhhhCC
Q 039585          343 -------------------GLLRVDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       343 -------------------glL~SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                                         |||+|||+|+.|++|+++|++||.||
T Consensus       348 ~~~~~~~p~~~d~~~~~~~~mL~SD~aL~~Dp~t~~iv~~fa~d~  392 (737)
T 3vli_A          348 EELKNSVPDAHDPDEKQTPMMLTTDIALKRDPDYREVMETFQENP  392 (737)
T ss_dssp             GGGTTCEEETTEEEEEECCCBCHHHHHHHHSHHHHHHHHHHHHCH
T ss_pred             ccccccCCcccCCcccccccccccCHHHhcCccHHHHHHHHhhCH
Confidence                               89999999999999999999999985

>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A*

Probab=100.00  E-value=7e-56  Score=464.80  Aligned_cols=250  Identities=22%  Similarity=0.252  Sum_probs=217.7

Q ss_pred             cccccc-ccccCchH-HHHHHHHHhhhhccCC--------ccchhhhhhhhhcccc-------cCC-CceeeeccCCCCc
Q 039585          101 ALRADY-YKTTCPDF-EKIVREFVHQKQTQSP--------STAAGALRVFMHDCFV-------DGC-DGSVLISSNAFNV  162 (368)
Q Consensus       101 ~L~~~f-Y~~sCp~~-e~iV~~~v~~~~~~~~--------~~a~~llRl~FHDc~v-------~Gc-DgSill~~~~~~~  162 (368)
                      .|..+| |.+.|..+ ...|++.|++.+....        .+++.+|||+||||++       ||| ||||+|+      
T Consensus        61 p~~~~f~y~~~~~~~D~~~vk~~I~~~~~~~~~~wp~d~g~~gp~lvRlawHdagTy~~~d~~GGa~ggsirf~------  134 (748)
T 3n3r_A           61 PMGKDFNYAQAFEKLDLAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAXHSAGTYRTADGRGGAGEGQQRFA------  134 (748)
T ss_dssp             CSCTTCCHHHHHHTSCHHHHHHHHHHHHTCCBTTBCCGGGCCHHHHHHHHHHHHTTCCTTTCCCSSTTCGGGST------
T ss_pred             CCCCCCcHHHHhhHhhHHHHHHHHHHHHhcccccccccccchhHHHHHHhhcccccccCCCCCCCCCCCceecC------
Confidence            466777 88877766 4589999999988764        7999999999999974       899 6889885      


Q ss_pred             ccccccccCCCCcchhHHHHHHHHHHHhhCCCCCcHHHHHHhhhhhHHHhcCCCCcccccCCcCCcccc-----------
Q 039585          163 AERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQ-----------  231 (368)
Q Consensus       163 ~E~~~~~N~~l~~~~~~~i~~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~-----------  231 (368)
                      .|+++++|.+| .++|++|+.||+++    |++|||||||+||||+||+++|||.|.|.+||+|++++.           
T Consensus       135 pE~~~~~N~gL-~~~~~~l~~IK~~~----p~~VScADliaLAg~~AV~~~GGP~~~f~~GR~D~~~~~~~~wg~e~~~~  209 (748)
T 3n3r_A          135 PLNSWPDNANL-DKARRLLWPIKQKY----GRAISWADLLILTGNVALESMGFKTFGFAGGRADTWEPADVYWGSEKIWL  209 (748)
T ss_dssp             TGGGCGGGTTH-HHHHHHTHHHHHHH----GGGSCHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCSSCCCCCCCSCSSTT
T ss_pred             cccCCcccccH-HHHHHHHHHHHHhc----cCCcCHHHHHHHHHHHHHHHcCCCccCCCCCCCCCCCCcccccCCccccc
Confidence            59999999999 68999999999998    678999999999999999999999999999999998864           


Q ss_pred             ------------ccC----------------C--CCCCCCCCCCHHHHHHHHHHCCCChhhhhhh-cccceecccccccc
Q 039585          232 ------------AAR----------------I--PGNLPTNNMTMDEILKMFASKGFSIQEYVAL-MGAHTIGFAHCKEF  280 (368)
Q Consensus       232 ------------~~~----------------~--~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaL-sGaHtiG~~hc~~f  280 (368)
                                  ..+                +  ...||+|..++++|++.|++||||++||||| +||||||++||..|
T Consensus       210 ~~~~~~~~r~s~~~~~~~p~aa~~mgliyvnpeg~~glPdP~~~a~~lr~~F~rmGlnd~E~VALisGaHTiGkaHc~~~  289 (748)
T 3n3r_A          210 ELSGGPNSRYSGDRQLENPLAAVQMGLIYVNPEGPDGNPDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTHGAGP  289 (748)
T ss_dssp             CCTTSTTCSEETTTEECTTCCSSSTTCSSSCTTSGGGCCCHHHHHHHHHHHHHTTTCCHHHHHHHHHHHTTSCBCCBSSC
T ss_pred             cccccccccccccccccccchhhhccccccCcccCCCCCCCCcCHHHHHHHHHHcCCCHHHHhHhhcCccccccccccch
Confidence                        000                0  1249999999999999999999999999999 79999999999999


Q ss_pred             ccccccCCCCCCCCCCCCHHHHHHH--hhhcCCCCCCCcccccCC---CCCCCccchhhhhhccccc-------------
Q 039585          281 SDRLFKFAPNQPTDPELNPKYAEAL--KAACKNHEQNITMTAFND---VMSPGKFDNSYFRGLPRGL-------------  342 (368)
Q Consensus       281 ~~Rl~~~~g~~~~dp~~~~~~~~~L--~~~Cp~~~~~~~~~~~lD---~~tp~~FDN~Yy~~ll~~~-------------  342 (368)
                      .+||+       +||++++.|++.|  ++.|+.+...++..+.||   +.||++|||+||++|+.++             
T Consensus       290 ~~rl~-------~dp~~~~~~~~~l~~~~~c~~g~g~~~~~sgle~~wt~tP~~fDN~Yf~~Ll~~~W~~~~~p~g~~qw  362 (748)
T 3n3r_A          290 ASNVG-------AEPEAAGIEAQGLGWKSAYRTGKGADAITSGLEVTWTTTPTQWSHNFFENLFGYEWELTKSPAGAHQW  362 (748)
T ss_dssp             GGGBC-------CCGGGSCGGGTTCCCCBCSTTSSGGGCBSSSCCCBCCSCTTSCCSHHHHHHHHSCEEEEECTTSCEEE
T ss_pred             hhccC-------CCCCcCHHHHhhHHHhhcCCCCCCCCcccccCCCCCCCCCccccHHHHHhHhcCceeeccCCCccccc
Confidence            99994       5999999999987  999986431233455554   6799999999999999876             


Q ss_pred             ---------------------cccccchhcccCCChHHHHHHhhhCC
Q 039585          343 ---------------------GLLRVDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       343 ---------------------glL~SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                                           |||+|||+|+.|++|+++|++||.||
T Consensus       363 ~~~~~~~~~p~~~d~~~~~~~~mL~SD~aL~~Dp~t~~iv~~fa~d~  409 (748)
T 3n3r_A          363 VAKGADAVIPDAFDPSKKHRPTMLTTDLSLRFDPAYEKISRRFHENP  409 (748)
T ss_dssp             EETTCCSCEECSSCTTCEECCEECHHHHHHHHSHHHHHHHHHHHHCH
T ss_pred             ccCCccccCCcccCCccccccccccccHHHhcCchHHHHHHHHhhCH
Confidence                                 99999999999999999999999985

>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} SCOP: a.93.1.0

Probab=100.00  E-value=7.9e-54  Score=418.02  Aligned_cols=209  Identities=26%  Similarity=0.282  Sum_probs=183.1

Q ss_pred             ccCchHHHHHHHHHhhhhccCCcc---chhhhhhhhhccc-------------ccCCCceeeeccCCCCcccccccccCC
Q 039585          109 TTCPDFEKIVREFVHQKQTQSPST---AAGALRVFMHDCF-------------VDGCDGSVLISSNAFNVAERDSDINLS  172 (368)
Q Consensus       109 ~sCp~~e~iV~~~v~~~~~~~~~~---a~~llRl~FHDc~-------------v~GcDgSill~~~~~~~~E~~~~~N~~  172 (368)
                      .+|- ++..|+++|++.+.++..+   ++.||||+||||+             +||||||||++++    +|+++++|.+
T Consensus        13 ~~cc-~~~~V~~di~~~l~~~g~~g~~a~~lvRlafHda~Ty~~~~~~~g~~~~GGcDGSill~~~----~Ek~~~~N~~   87 (338)
T 3q3u_A           13 AACC-AWFPVLDDIQANLFNGGKCEEEAHEAVRLTFHDAVGFSLAAQKAGKFGGGGADGSILAFSD----IETAFIPNFG   87 (338)
T ss_dssp             GGGG-GHHHHHHHHHHHTSTTTCCSHHHHHHHHHHHHHHTSCCHHHHHTTSCCCCSSSSHHHHTHH----HHTTSGGGTT
T ss_pred             CcCc-CHHHHHHHHHHHHhhCCCCchHHHHHHHHHHhhhhcccccccccccCCCCCCCCeeeeCCc----ccccCccccC
Confidence            3455 4667999999999988665   4599999999999             6899999998532    5999999999


Q ss_pred             CCcchhHHHHHHHHHHHhhCCCCCcHHHHHHhhhhhHHHh-cCCCCcccccCCcCCccccccCCCCCCCCCCCCHHHHHH
Q 039585          173 LPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVM-AGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILK  251 (368)
Q Consensus       173 l~~~~~~~i~~iK~~le~~cp~~VScADilalAa~~av~~-~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~  251 (368)
                      |  +  ++|+.||..+|+.   +|||||||+|||++||+. +|||.|.|.+||+|++++..   +++||.+..++++|++
T Consensus        88 L--~--~vi~~lk~~~e~~---~VS~ADliaLAg~~Ave~~~GGp~~~f~~GR~Da~~~~~---~g~lP~p~~~~~~L~~  157 (338)
T 3q3u_A           88 L--E--FTTEGFIPFALAH---GVSFGDFVQFAGAVGAANCAGGPRLQFLAGRSNISQPSP---DGLVPDPTDSADKILA  157 (338)
T ss_dssp             H--H--HHHHHHHHHHHHH---TCCHHHHHHHHHHHHHHTSBTCCCCCCEECCCSCCCCCC---TTCSCCTTSCHHHHHH
T ss_pred             H--H--HHHHHHHHHHHHh---cCCHHHHHHHHHHHHHHHhhcCCCcCCcCCCCCCCCCCC---CCCCCCCCCCHHHHHH
Confidence            9  4  8999999999987   799999999999999995 79999999999999998753   4689999999999999


Q ss_pred             HHHHCCCChhhhhhhcccceeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCCCCccc
Q 039585          252 MFASKGFSIQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFD  331 (368)
Q Consensus       252 ~F~~~Gl~~~dlVaLsGaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FD  331 (368)
                      .|+++||+.+|||||+||||||++||.               ||+++                    .+.+| .||++||
T Consensus       158 ~F~~~GL~~~EmVaLsGaHTiG~ah~~---------------dp~~~--------------------g~~~d-~tP~~fD  201 (338)
T 3q3u_A          158 RMADIGFSPTEVVHLLASHSIAAQYEV---------------DTDVA--------------------GSPFD-STPSVFD  201 (338)
T ss_dssp             HHHTTTCCHHHHHHHGGGGGGCEESSS---------------CGGGT--------------------TEESS-SCTTBCS
T ss_pred             HHHHcCCChHHhHhhhchhhcccccCC---------------CCCcC--------------------CCcCC-CCCCccc
Confidence            999999999999999999999999972               33332                    13567 6999999


Q ss_pred             hhhhhhccc-ccc------------------ccccchhcccCCChHHHHHHhhhCC
Q 039585          332 NSYFRGLPR-GLG------------------LLRVDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       332 N~Yy~~ll~-~~g------------------lL~SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                      |+||+||+. +++                  ||+||++|+.|++|+.+|++||+||
T Consensus       202 N~Yf~nLl~~~~~~~~~~~~~~~~d~~~~~~ll~SD~~L~~d~~tr~~v~~yA~d~  257 (338)
T 3q3u_A          202 TQFFVESLLHGTQFTGSGQGGEVMSPIPGEFRLQSDFALSRDPRTACEWQALVNNQ  257 (338)
T ss_dssp             THHHHHHTBCCCBCSSCSCTTEECBSSTTCCEEHHHHHHHHSTTTHHHHHHHTTCH
T ss_pred             HHHHHHHHhccCcCCCCCCCCccccCCCCccccccCHHhhcCHHHHHHHHHHhhhH
Confidence            999999985 555                  9999999999999999999999884

>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} SCOP: a.93.1.1 PDB: 4a71_A* 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 4a6z_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* ...

Probab=100.00  E-value=1.4e-53  Score=410.13  Aligned_cols=209  Identities=23%  Similarity=0.356  Sum_probs=182.4

Q ss_pred             ccCchHHHHHHHHHhhhhccCC------ccchhhhhhhhhccc-------ccCCC-ceeeeccCCCCcccccccccCCCC
Q 039585          109 TTCPDFEKIVREFVHQKQTQSP------STAAGALRVFMHDCF-------VDGCD-GSVLISSNAFNVAERDSDINLSLP  174 (368)
Q Consensus       109 ~sCp~~e~iV~~~v~~~~~~~~------~~a~~llRl~FHDc~-------v~GcD-gSill~~~~~~~~E~~~~~N~~l~  174 (368)
                      ++|.+. ..|+++|++.+..+.      .+++.||||+||||+       +|||| |||+|.      +|+++++|.+| 
T Consensus        14 ~~~~d~-~~v~~di~~~~~~~~~~~d~~~~~~~lvRlawHda~Tyr~~d~~GGadg~~ir~~------pEk~~~~N~~L-   85 (294)
T 3e2o_A           14 RSYEDF-QKVYNAIALKLREDDEYDNYIGYGPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFK------KEFNDPSNAGL-   85 (294)
T ss_dssp             CCHHHH-HHHHHHHHHHHHHCTTHHHHTCSHHHHHHHHHHHHTTCBTTTTBSSSTTCGGGSH------HHHTCGGGTTT-
T ss_pred             CCHHHH-HHHHHHHHHHHhcCcccccccchHHHHHHHHHHHhcccccCCCCCCCCcceeccc------cccCCccccch-
Confidence            345544 468888888887765      799999999999998       58999 688875      69999999999 


Q ss_pred             cchhHHHHHHHHHHHhhCCCCCcHHHHHHhhhhhHHHhcCCCCcccccCCcCCccccccCCCCCCCCCCCCHHHHHHHHH
Q 039585          175 GDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFA  254 (368)
Q Consensus       175 ~~~~~~i~~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~  254 (368)
                      .+++++|+.||+++    | +|||||||+||||+||+.+|||.|+|.+||+|++++. .+++++||.++.++.+|++.|+
T Consensus        86 ~~~~~~le~iK~~~----~-~VS~ADliaLAg~~AVe~~gGp~~~~~~GR~Da~~~~-~~~~~~lP~p~~~~~~l~~~F~  159 (294)
T 3e2o_A           86 QNGFKFLEPIHKEF----P-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDT-TPDNGRLPDADKDADYVRTFFQ  159 (294)
T ss_dssp             HHHHHHHHHHHHHC----T-TSCHHHHHHHHHHHHHHHTTCCCCCBCCCCCCCCGGG-CCCSCCSCCSSCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhC----C-CCCHHHHHHHHHHHHHHhccCCccCCCCCcCCCcccC-CCCCCCCCCcccCHHHHHHHHH
Confidence            68999999999985    5 8999999999999999999999999999999999854 3456789999999999999999


Q ss_pred             HCCCChhhhhhhcccceeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCCCCccchhh
Q 039585          255 SKGFSIQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSY  334 (368)
Q Consensus       255 ~~Gl~~~dlVaLsGaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Y  334 (368)
                      ++||+.+|||||+||||||++||.+.     +|.                    |           .+| .||++|||+|
T Consensus       160 ~~GLs~~EmVaLsGaHTiG~~h~~~~-----g~~--------------------g-----------~~~-~tP~~fDN~Y  202 (294)
T 3e2o_A          160 RLNMNDREVVALMGAHALGKTHLKRS-----GYE--------------------G-----------PWG-AANNVFTNEF  202 (294)
T ss_dssp             TTTCCHHHHHHHHGGGGSSEECHHHH-----SCC--------------------E-----------ESS-SCTTSCSSHH
T ss_pred             HcCCCHHHHHHHhcccccccccccCC-----CCC--------------------C-----------CCc-CcccccchHH
Confidence            99999999999999999999998531     121                    1           233 5899999999


Q ss_pred             hhhccc-------------------cccccccchhcccCCChHHHHHHhhhCC
Q 039585          335 FRGLPR-------------------GLGLLRVDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       335 y~~ll~-------------------~~glL~SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                      |+||+.                   |.+||+||++|+.|++|+.+|+.||.||
T Consensus       203 f~nLl~~~w~~~~~~~~~~~~~~~~g~~~l~sD~~L~~d~~~r~~v~~yA~d~  255 (294)
T 3e2o_A          203 YLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTBYSLIQDPKYLSIVKEYANDQ  255 (294)
T ss_dssp             HHHHHHSCEEEEECTTSCEEEEETTSCEECHHHHHHHHSHHHHHHHHHHHTCH
T ss_pred             HHHHHhccceeccCCCCceEEecCCCCccCccCHHhhcChhHHHHHHHHhhCH
Confidence            999998                   3679999999999999999999999874

>1u2k_A Peroxidase/catalase HPI; KATG, catalase-peroxidase, C-terminal domain, oxidoreductase; 2.00A {Escherichia coli} SCOP: a.93.1.3 PDB: 1u2l_A 1u2j_A

Probab=100.00  E-value=1.3e-51  Score=399.15  Aligned_cols=197  Identities=20%  Similarity=0.185  Sum_probs=173.3

Q ss_pred             HHHHhhhhccCCccchhhhhhhhhcccc-------cCCCc-eeeeccCCCCcccccccccCCCCcchhHHHHHHHHHHHh
Q 039585          119 REFVHQKQTQSPSTAAGALRVFMHDCFV-------DGCDG-SVLISSNAFNVAERDSDINLSLPGDAFDVVIKIKNALED  190 (368)
Q Consensus       119 ~~~v~~~~~~~~~~a~~llRl~FHDc~v-------~GcDg-Sill~~~~~~~~E~~~~~N~~l~~~~~~~i~~iK~~le~  190 (368)
                      .+.|++.+.+++.++++||||+||||||       +|||| +|+++      +|+++++|.++ .++|++|+.||++   
T Consensus        33 i~~l~~~i~~~~~~~a~llRlafHDc~t~~~sd~~gG~nGa~ir~~------~Ek~~~~N~~~-~~~~~~le~iK~~---  102 (309)
T 1u2k_A           33 IIDLKFAIADSGLSVSELVSVAWASASTFRGGDKRGGANGARLALM------PQRDWDVNAAA-VRALPVLEKIQKE---  102 (309)
T ss_dssp             HHHHHHHHHTSCCCHHHHHHHHHHHHTTCCTTCSSCSSTBCGGGST------TGGGCGGGTTH-HHHHHHHHHHHHH---
T ss_pred             HHHHHHHHHHCCCcHHHHHhhcccccccccCcCCCCCCCcccccCc------hhccccCCCcc-hhHHHHHHHHHHc---
Confidence            4678888889999999999999999997       67887 56653      69999999987 5899999999998   


Q ss_pred             hCCCCCcHHHHHHhhhhhHHHhcCC-----CCcccccCCcCCccccccCCC---CCCCCCC------------CCHHHHH
Q 039585          191 ACPGVVSCADILTASTRNLVVMAGG-----PRFNVSFGRKDGLVSQAARIP---GNLPTNN------------MTMDEIL  250 (368)
Q Consensus       191 ~cp~~VScADilalAa~~av~~~GG-----P~~~v~~GR~D~~~s~~~~~~---~~lP~p~------------~~~~~l~  250 (368)
                       || +|||||||+||||+||+++||     |.|+|.+||+|++++.. +++   ..+|.++            .++++|+
T Consensus       103 -~p-~VScADiiaLAg~~AV~~~gG~~G~~p~~~v~~GR~D~~~~~~-~~~~~~~llP~~~g~~n~~~~~~~~~~~~~L~  179 (309)
T 1u2k_A          103 -SG-KASLADIIVLAGVVGVEKAASAAGLSIHVPFAPGRVDARQDQT-DIEMFELLEPIADGFRNYRARLDVSTTESLLI  179 (309)
T ss_dssp             -HC-SSCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCCBCCGGGS-CHHHHHTTCCSEETTTTEECSCCSSCHHHHHH
T ss_pred             -CC-CccHHHHHHHHHHHHHHHHHHhcCCccccCCCCCCCCCccccc-cccccccCCCCcccccccccccccCCCHHHHH
Confidence             88 899999999999999999999     99999999999998863 332   3488875            6789999


Q ss_pred             HHHHHCCCChhhhhhhcccc-eeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCCCCc
Q 039585          251 KMFASKGFSIQEYVALMGAH-TIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGK  329 (368)
Q Consensus       251 ~~F~~~Gl~~~dlVaLsGaH-tiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~  329 (368)
                      +.|+++||+.+|||||+||| |||++||.++    +   |                               .++ .||.+
T Consensus       180 ~~F~~~GLt~~emVaLsGah~tiG~~hc~s~----~---g-------------------------------~~~-~tP~~  220 (309)
T 1u2k_A          180 DKAQQLTLTAPEMTALVGGMRVLGANFDGSK----N---G-------------------------------VFT-DRVGV  220 (309)
T ss_dssp             HHHHHTTCCHHHHHHHHHHHHHHTCCTTCCC----T---T-------------------------------CCC-SSTTS
T ss_pred             HHHHHcCCCHHHHHhhcccceeeeeecccCC----C---C-------------------------------CCC-CCCce
Confidence            99999999999999999997 9999999642    1   1                               122 58999


Q ss_pred             cchhhhhhccc----------ccccc---------------ccchhcccCCChHHHHHHhhhC
Q 039585          330 FDNSYFRGLPR----------GLGLL---------------RVDNMLVKDPRTKPLVDQYASN  367 (368)
Q Consensus       330 FDN~Yy~~ll~----------~~glL---------------~SD~~L~~d~~t~~~V~~yA~d  367 (368)
                      |||+||+||+.          ++|+|               +||++|++|++|+.+|+.||+|
T Consensus       221 fDN~yf~nLl~~~~~w~~~~~~~gl~~~~d~~tg~~~~~~~~sD~~L~~d~~~r~~v~~yA~d  283 (309)
T 1u2k_A          221 LSNDFFVNLLDMRYEWKATDESKELFEGRDRETGEVKFTASRADLVFGSNSVLRAVAEVYASS  283 (309)
T ss_dssp             CCSHHHHHHHCTTEEEEESSTTCCEEEEEETTTCCEEEEEEHHHHHHHHSHHHHHHHHHHTSS
T ss_pred             echHHHHHHHhcccccccCCCCCcceeeecCCCcceecccChhhhhhhcCHHHHHHHHHHhcC
Confidence            99999999999          67888               9999999999999999999987

>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A*

Probab=100.00  E-value=1.3e-48  Score=410.71  Aligned_cols=201  Identities=17%  Similarity=0.190  Sum_probs=178.9

Q ss_pred             HHHhhhhccCCccchhhhhhhhhcccc-------cCCCc-eeeeccCCCCcccccccccC---CCCcchhHHHHHHHHHH
Q 039585          120 EFVHQKQTQSPSTAAGALRVFMHDCFV-------DGCDG-SVLISSNAFNVAERDSDINL---SLPGDAFDVVIKIKNAL  188 (368)
Q Consensus       120 ~~v~~~~~~~~~~a~~llRl~FHDc~v-------~GcDg-Sill~~~~~~~~E~~~~~N~---~l~~~~~~~i~~iK~~l  188 (368)
                      +.|++.+..++.++++||||+||||||       ||||| ||+|+      +|+++..|.   +| .++|++|+.||+++
T Consensus       456 ~~lk~~i~~~~~~~a~LlRlafHDc~tfr~sd~~GGcDGasI~L~------~Ek~~~~N~p~N~L-~~~~~~le~IK~~~  528 (740)
T 2cca_A          456 ASLKSQIRASGLTVSQLVSTAWAAASSFRGSDKRGGANGGRIRLQ------PQVGWEVNDPDGDL-RKVIRTLEEIQESF  528 (740)
T ss_dssp             HHHHHHHHTTTCCHHHHHHHHHHHHTTCBTTTTBCSSTBCGGGST------TGGGCSTTCTTTTH-HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCcHHHHHHHHHHHhccccCCCCCCCCCCceeecc------cccccccccchhhH-HHHHHHHHHHHHHH
Confidence            788888999999999999999999998       89999 89996      599999997   77 58999999999999


Q ss_pred             HhhCC--CCCcHHHHHHhhhhhHHHhcCC-----CCcccccCCcCCccccccCCC---CCCCCCC------------CCH
Q 039585          189 EDACP--GVVSCADILTASTRNLVVMAGG-----PRFNVSFGRKDGLVSQAARIP---GNLPTNN------------MTM  246 (368)
Q Consensus       189 e~~cp--~~VScADilalAa~~av~~~GG-----P~~~v~~GR~D~~~s~~~~~~---~~lP~p~------------~~~  246 (368)
                      |+.|+  ++|||||||+||||+||+++||     |.|+|.+||+|++++.. +++   ..+|.++            .++
T Consensus       529 e~~c~~~~~VScADiiaLAg~~AVe~agG~~G~~p~vp~~~GR~Da~~~~~-d~~sf~~llP~~dgf~n~~~~~~~~~~~  607 (740)
T 2cca_A          529 NSAAPGNIKVSFADLVVLGGCAAIEKAAKAAGHNITVPFTPGRTDASQEQT-DVESFAVLEPKADGFRNYLGKGNPLPAE  607 (740)
T ss_dssp             HHHCCTTBCCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCCBCCGGGS-CHHHHGGGCCSEEGGGTEECSCCSSCHH
T ss_pred             hhhccCCCCCCHHHHHHHHHHHHHHHHHhccCCCCcccCCCCCCCCccccc-cccccccCCCCCccccccccccccCCcH
Confidence            99875  8999999999999999999998     99999999999998863 332   2378775            458


Q ss_pred             HHHHHHHHHCCCChhhhhhhcccc-eeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCC
Q 039585          247 DEILKMFASKGFSIQEYVALMGAH-TIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVM  325 (368)
Q Consensus       247 ~~l~~~F~~~Gl~~~dlVaLsGaH-tiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~  325 (368)
                      +.|+++|+++||+.+|||||+||| |||++||.+.    +   |                               .++ .
T Consensus       608 ~~L~~~F~~~GLt~~EmVaLsGaH~tlG~~hc~s~----~---G-------------------------------~~t-~  648 (740)
T 2cca_A          608 YMLLDKANLLTLSAPEMTVLVGGLRVLGANYKRLP----L---G-------------------------------VFT-E  648 (740)
T ss_dssp             HHHHHHHHHTTCCHHHHHHHHHHHHHTTCSGGGCC----T---T-------------------------------CCC-S
T ss_pred             HHHHHHHHHcCCCHHHHHHHhccceeeccccCCCC----C---C-------------------------------CCC-C
Confidence            999999999999999999999999 9999999641    1   0                               122 5


Q ss_pred             CCCccchhhhhhcccc----------cccc--------------ccchhcccCCChHHHHHHhhhC
Q 039585          326 SPGKFDNSYFRGLPRG----------LGLL--------------RVDNMLVKDPRTKPLVDQYASN  367 (368)
Q Consensus       326 tp~~FDN~Yy~~ll~~----------~glL--------------~SD~~L~~d~~t~~~V~~yA~d  367 (368)
                      ||.+|||+||+||+.+          +|+|              +||++|++|++||.+|+.||+|
T Consensus       649 tP~~fDN~yF~nLl~~~~~w~~~~~~~gl~eg~d~tg~~k~~~~~sD~~L~sd~~tr~~ve~YA~d  714 (740)
T 2cca_A          649 ASESLTNDFFVNLLDMGITWEPSPADDGTYQGKDGSGKVKWTGSRVDLVFGSNSELRALVEVYGAD  714 (740)
T ss_dssp             STTSCCSHHHHHHTCTTCEEEECSSCSSEEEEECTTSCEEEEEEHHHHHHHHSHHHHHHHHHHTST
T ss_pred             CCCcCCcHHHHHHHhcccccccCCCCCCceeeecCCCceeeccChhhHhhhcCHHHHHHHHHHhcc
Confidence            8999999999999997          7887              8999999999999999999987

>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3

Probab=100.00  E-value=4.7e-48  Score=405.94  Aligned_cols=203  Identities=17%  Similarity=0.219  Sum_probs=178.4

Q ss_pred             HHHHHhhhhccCCccchhhhhhhhhcccc-------cCCCc-eeeeccCCCCcccccccccC--CCCcchhHHHHHHHHH
Q 039585          118 VREFVHQKQTQSPSTAAGALRVFMHDCFV-------DGCDG-SVLISSNAFNVAERDSDINL--SLPGDAFDVVIKIKNA  187 (368)
Q Consensus       118 V~~~v~~~~~~~~~~a~~llRl~FHDc~v-------~GcDg-Sill~~~~~~~~E~~~~~N~--~l~~~~~~~i~~iK~~  187 (368)
                      ..+.|++.+.+++.++++||||+|||||+       +|||| ||+|.      +|+++..|.  +| .++|++|+.||++
T Consensus       445 di~~lk~~i~~~~~~~a~LvRlafHDc~t~d~sD~~GGanGasIrl~------~Ek~~~~N~p~~L-~r~~~vle~IK~~  517 (731)
T 1itk_A          445 EIAELKEEILDSDLSVSQLVKTAWASASTYRDSDKRGGANGARLRLE------PQKNWEVNEPEQL-ETVLGTLENIQTE  517 (731)
T ss_dssp             HHHHHHHHHHHSSCCHHHHHHHHHHHHTTCBTTTTBCCSTBCGGGST------TGGGCGGGCHHHH-HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCcHHHHHHHHHHHHhcccccCCCCCCCccceecc------cccccccccchHH-HHHHHHHHHHHHH
Confidence            45788888999999999999999999997       56666 56653      699999998  67 5899999999999


Q ss_pred             HHhhC--CCCCcHHHHHHhhhhhHHHhcC---C--CCcccccCCcCCccccccCCC---CCCCCCC------------CC
Q 039585          188 LEDAC--PGVVSCADILTASTRNLVVMAG---G--PRFNVSFGRKDGLVSQAARIP---GNLPTNN------------MT  245 (368)
Q Consensus       188 le~~c--p~~VScADilalAa~~av~~~G---G--P~~~v~~GR~D~~~s~~~~~~---~~lP~p~------------~~  245 (368)
                      +|+.|  +++|||||||+||||+||+++|   |  |.|+|.+||+|++++.. +++   ..+|.++            .+
T Consensus       518 ~e~~c~c~~~VScADiiaLAgr~AVe~ag~~~G~~p~vp~~~GR~Da~~s~t-d~~sf~~llP~pdgfrn~~~~~~~~~~  596 (731)
T 1itk_A          518 FNDSRSDGTQVSLADLIVLGGNAAVEQAAANAGYDVEIPFEPGRVDAGPEHT-DAPSFDALKPKVDGVRNYIQDDITRPA  596 (731)
T ss_dssp             HHHHCCSSBCCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCCBCCGGGC-CHHHHGGGCCSEETTTTEECTTCSSCH
T ss_pred             HHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCcccccc-ccccccCCCCCCccccccccccccCCC
Confidence            99984  6899999999999999999999   8  99999999999998853 332   3588886            56


Q ss_pred             HHHHHHHHHHCCCChhhhhhhcccc-eeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCC
Q 039585          246 MDEILKMFASKGFSIQEYVALMGAH-TIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDV  324 (368)
Q Consensus       246 ~~~l~~~F~~~Gl~~~dlVaLsGaH-tiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~  324 (368)
                      ++.|+++|+++||+.+|||||+||| |||++||.+|    +   |                               .+| 
T Consensus       597 ~~~L~~~F~~~GLt~~EmVaLsGaH~tlG~~hc~s~----~---G-------------------------------~~t-  637 (731)
T 1itk_A          597 EEVLVDNADLLNLTASELTALIGGMRSIGANYQDTD----L---G-------------------------------VFT-  637 (731)
T ss_dssp             HHHHHHHHHHTTCCHHHHHHHHHHHHHHCCCGGGCC----T---T-------------------------------CCC-
T ss_pred             HHHHHHHHHHCCCCHHHHHHHhccceecccccCcCC----C---C-------------------------------CCC-
Confidence            8999999999999999999999998 9999999876    1   1                               122 


Q ss_pred             CCCCccchhhhhhcccc----------cccc---------------ccchhcccCCChHHHHHHhhhC
Q 039585          325 MSPGKFDNSYFRGLPRG----------LGLL---------------RVDNMLVKDPRTKPLVDQYASN  367 (368)
Q Consensus       325 ~tp~~FDN~Yy~~ll~~----------~glL---------------~SD~~L~~d~~t~~~V~~yA~d  367 (368)
                      .||.+|||+||+||+.+          +|+|               +||++|++|++||.+|+.||+|
T Consensus       638 ~tP~~fDN~Yf~nLl~~~~~W~~~~~~~gl~e~~dr~tg~~k~~~~~sD~~L~sd~~tr~~ve~YA~d  705 (731)
T 1itk_A          638 DEPETLTNDFFVNLLDMGTEWEPAADSEHRYKGLDRDTGEVKWEATRIDLIFGSNDRLRAISEVYGSA  705 (731)
T ss_dssp             SSTTCCSSHHHHHHHCTTEEEEECTTCSSEEEEEETTTCCEEEEEEHHHHGGGTSHHHHHHHHHHTST
T ss_pred             CCCcccchHHHHHHHhcccccccCCCCCCceeeecCCCcceecccCHhhHhhhcCHhHHHHHHHHhcc
Confidence            48999999999999997          7888               8999999999999999999987

>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3

Probab=100.00  E-value=1.8e-47  Score=401.02  Aligned_cols=195  Identities=19%  Similarity=0.223  Sum_probs=173.1

Q ss_pred             HHHhhhhccCCccchhhhhhhhhcccc-------cCCCc-eeeeccCCCCcccccccccCC--CCcchhHHHHHHHHHHH
Q 039585          120 EFVHQKQTQSPSTAAGALRVFMHDCFV-------DGCDG-SVLISSNAFNVAERDSDINLS--LPGDAFDVVIKIKNALE  189 (368)
Q Consensus       120 ~~v~~~~~~~~~~a~~llRl~FHDc~v-------~GcDg-Sill~~~~~~~~E~~~~~N~~--l~~~~~~~i~~iK~~le  189 (368)
                      +.|++.+.+++.++++||||+||||||       +|||| ||+|+      +|+++.+|.+  | .|+|++|+.||+++|
T Consensus       446 ~~vk~~i~~~~~~~a~LlRlafHDc~v~rg~D~~gGadGasI~l~------~Ek~~~~N~~~~l-~r~~~vle~IKa~~e  518 (720)
T 1ub2_A          446 QAVKDRIAASGLSISELVSTAWDSARTYRNSDKRGGANGARIRLA------PQKDWEGNEPDRL-PKVLAVLEGISAATG  518 (720)
T ss_dssp             HHHHHHHHHSCCCHHHHHHHHHHHHTTCBTTTTBCSSTBTGGGST------TGGGCGGGCTTHH-HHHHHHHHHHHHHSS
T ss_pred             HHHHHHHHhCCCcHHHHHHHHHhHhccccCCCCCCCCCCcceecc------cccccccccchHH-HHHHHHHHHHHHHcC
Confidence            677888888999999999999999999       67778 78875      6999999984  6 489999999999996


Q ss_pred             hhCCCCCcHHHHHHhhhhhHHHhcC---C--CCcccccCCcCCccccccCCC--CCC-CC------------CCCCHHHH
Q 039585          190 DACPGVVSCADILTASTRNLVVMAG---G--PRFNVSFGRKDGLVSQAARIP--GNL-PT------------NNMTMDEI  249 (368)
Q Consensus       190 ~~cp~~VScADilalAa~~av~~~G---G--P~~~v~~GR~D~~~s~~~~~~--~~l-P~------------p~~~~~~l  249 (368)
                            |||||||+||||+||+++|   |  |.|+|.+||+|++++.. +++  ..| |.            ++.++++|
T Consensus       519 ------VScADiiaLAar~AV~~ag~~~G~~p~~~v~~GR~Da~~s~~-d~~s~~~LeP~~dgfl~~~~~~~~~~~~~~L  591 (720)
T 1ub2_A          519 ------ATVADVIVLAGNVGVEQKARAAGVEIVLPFAPGRGDATAEQT-DTESFAVLEPIHDAIATGSSRTMRQRLKNCC  591 (720)
T ss_dssp             ------CCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCCBCCSTTC-CTTTTGGGCCSEEGGGTEESSCCSSCHHHHH
T ss_pred             ------CCHHHHHHHHHHHHHHHHHHhcCCCccccCCCCCCCCccccc-ccccccCCCCCCccccccccccccccCHHHH
Confidence                  9999999999999999999   9  99999999999999863 443  456 76            46788999


Q ss_pred             HHHHHHCCCChhhhhhhcc-cceeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCCCC
Q 039585          250 LKMFASKGFSIQEYVALMG-AHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPG  328 (368)
Q Consensus       250 ~~~F~~~Gl~~~dlVaLsG-aHtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~  328 (368)
                      +++|+++||+.+|||||+| +||||++||.+|    +   |                               .++ .||.
T Consensus       592 i~~F~~~GLt~~EmVaLsGg~HtiG~~hc~sf----~---g-------------------------------~~t-~tP~  632 (720)
T 1ub2_A          592 LIATQLLGLTAPEMTVLIGGLRVLGTNHGGTK----H---V-------------------------------VFT-DREG  632 (720)
T ss_dssp             HHHHHHHTCCHHHHHHHHHHHHHTTCCGGGCC----T---T-------------------------------CCC-SCTT
T ss_pred             HHHHHHcCCCHHHHhhhccccccccccccccc----C---C-------------------------------CCC-CCCC
Confidence            9999999999999999999 599999999876    1   1                               122 5899


Q ss_pred             ccchhhhhhccccc--------cc---------------cccchhcccCCChHHHHHHhhhC
Q 039585          329 KFDNSYFRGLPRGL--------GL---------------LRVDNMLVKDPRTKPLVDQYASN  367 (368)
Q Consensus       329 ~FDN~Yy~~ll~~~--------gl---------------L~SD~~L~~d~~t~~~V~~yA~d  367 (368)
                      +|||+||+||+.++        |+               |+||++|++|++||.+|+.||+|
T Consensus       633 ~fDN~Yf~nLl~~~~~w~~~~~gl~e~~dr~tg~~k~~~l~sD~~L~sd~~tr~~ve~yA~d  694 (720)
T 1ub2_A          633 VLTNDFFVNLTDMNYLWKPAGKNLYEICDRKTNQVKWTATRVDLVFGSNSILRAYSELYAQD  694 (720)
T ss_dssp             SCCSHHHHHHTCTTEEEEECSTTCEEEEETTTCCEEEEECHHHHGGGTSHHHHHHHHHHTST
T ss_pred             cCchHHHHHHHhCCcccccCCCCcceeeccCCCceeeeechhhhhhhcCHhHHHHHHHHhcc
Confidence            99999999999988        88               99999999999999999999987

>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana}

Probab=100.00  E-value=1.4e-46  Score=355.03  Aligned_cols=178  Identities=21%  Similarity=0.428  Sum_probs=163.8

Q ss_pred             cCchHHHHHHHHHhhhhccCCccchhhhhhhhhccc-------ccCCCceeeeccCCCCcccccccccCCCCcchhHHHH
Q 039585          110 TCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCF-------VDGCDGSVLISSNAFNVAERDSDINLSLPGDAFDVVI  182 (368)
Q Consensus       110 sCp~~e~iV~~~v~~~~~~~~~~a~~llRl~FHDc~-------v~GcDgSill~~~~~~~~E~~~~~N~~l~~~~~~~i~  182 (368)
                      .|+.+|+||++.|++.+..++++++.||||+|||||       +|||||||+|+      +|+++++|.+| .+++++|+
T Consensus         9 ~~~~~~~iV~~~v~~~~~~~~~~a~~llRLafHDc~Ty~~~~~~gGcDGSIll~------~E~~~~~N~gL-~~~~~~l~   81 (268)
T 3rrw_A            9 QRSEFQSKIKILLSTTIKAKPELVPSLLKLALNDAMTYDKATKSGGANGSIRFS------SELSRAENEGL-SDGLSLIE   81 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHTTCBTTTTBCSSSSGGGSH------HHHTSGGGTTC-HHHHHHHH
T ss_pred             ccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHhhcCcCCCCCCCCCCeeeeeh------hhccCcccccH-HHHHHHHH
Confidence            478999999999999999999999999999999999       89999999996      69999999999 68999999


Q ss_pred             HHHHHHHhhCCC-CCcHHHHHHhhhhhHHH---------hcCCCC---------------c---ccccCCcCCccccccC
Q 039585          183 KIKNALEDACPG-VVSCADILTASTRNLVV---------MAGGPR---------------F---NVSFGRKDGLVSQAAR  234 (368)
Q Consensus       183 ~iK~~le~~cp~-~VScADilalAa~~av~---------~~GGP~---------------~---~v~~GR~D~~~s~~~~  234 (368)
                      .||+++|+.||+ +|||||||+||||+||+         ++|||.               |   .|++||+|++.+.   
T Consensus        82 ~iK~~~e~~cpg~~VS~ADliaLAa~~AV~~~~~~~ai~~~GGp~i~g~~l~~~~gs~~~w~~~~v~~GR~D~~~~~---  158 (268)
T 3rrw_A           82 EVKKEIDSISKGGPISYADIIQLAGQSAVKFTYLASAIRKCGGNEEKGNLLYTAYGSAGQWGLFDRNFGRSDATEAD---  158 (268)
T ss_dssp             HHHHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHSCSGGGGHHHHHCCCCCCCSSCC---
T ss_pred             HHHHHHHhhCCCCCCCHHHHHHHHHHHHHhhhhhhhHHHhcCCCcccccccccccccccccccCcCcCCCcCCCccC---
Confidence            999999999998 89999999999999887         899998               5   7899999998763   


Q ss_pred             CCCCCCCCC-CCHHHHHHHHHHCCCChhhhhhhcccceeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCC
Q 039585          235 IPGNLPTNN-MTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHE  313 (368)
Q Consensus       235 ~~~~lP~p~-~~~~~l~~~F~~~Gl~~~dlVaLsGaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~  313 (368)
                      ++++||.++ .++++|++.|+++||+.+|||+|||.                  .|                        
T Consensus       159 ~~g~LP~p~~~~~~~l~~~F~~~Gl~~~dlVaLsGf------------------~g------------------------  196 (268)
T 3rrw_A          159 PEGRVPQWGKATVQEMKDKFIAVGLGPRQLAVMSAF------------------LG------------------------  196 (268)
T ss_dssp             CSSCSCCGGGCCHHHHHHHHHHTTCCHHHHHHTGGG------------------GC------------------------
T ss_pred             cccCCCCCCcCCHHHHHHHHHHcCCChhhceeeecc------------------CC------------------------
Confidence            567999998 69999999999999999999999981                  11                        


Q ss_pred             CCCcccccCCCCCCCccchhhhhhccccccccccchhcccCCChHHHHHHhhhC
Q 039585          314 QNITMTAFNDVMSPGKFDNSYFRGLPRGLGLLRVDNMLVKDPRTKPLVDQYASN  367 (368)
Q Consensus       314 ~~~~~~~~lD~~tp~~FDN~Yy~~ll~~~glL~SD~~L~~d~~t~~~V~~yA~d  367 (368)
                                   |               ..|+||++|++|++++.+|++||.|
T Consensus       197 -------------p---------------~~l~sD~~L~~Dp~~~~~V~~YA~d  222 (268)
T 3rrw_A          197 -------------P---------------DQAATEQLLATDPQVAPWVQKYQRS  222 (268)
T ss_dssp             -------------S---------------CHHHHHHHHTTSTTTHHHHHHHHHH
T ss_pred             -------------C---------------CccHHHHHHHcChhHHHHHHHHhcC
Confidence                         0               1299999999999999999999987

>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A*

Probab=100.00  E-value=3.2e-46  Score=391.33  Aligned_cols=201  Identities=16%  Similarity=0.209  Sum_probs=175.2

Q ss_pred             HHHhhhhccCCccchhhhhhhhhccc-------ccCCCc-eeeeccCCCCcccccccccC--CCCcchhHHHHHHHHHHH
Q 039585          120 EFVHQKQTQSPSTAAGALRVFMHDCF-------VDGCDG-SVLISSNAFNVAERDSDINL--SLPGDAFDVVIKIKNALE  189 (368)
Q Consensus       120 ~~v~~~~~~~~~~a~~llRl~FHDc~-------v~GcDg-Sill~~~~~~~~E~~~~~N~--~l~~~~~~~i~~iK~~le  189 (368)
                      ..+++.+......++.||||+||||.       +||||| ||+|.      +|+++.+|.  +| .++|++|+.||+++|
T Consensus       447 ~~lk~~~~~~g~~~~~lvRlAwhdA~Tf~~sd~~GGanGasIrl~------pEk~~~~N~p~gL-~~~~~vle~IK~~~e  519 (737)
T 3vli_A          447 AELKEEILDSDLSVSQLVKTAWASASTYRDSDKRGGANGARLRLE------PQKNWEVNEPEQL-ETVLGTLENIQTEFN  519 (737)
T ss_dssp             HHHHHHHHHSSCCHHHHHHHHHHHHTTCBTTTTBCSSTBCGGGST------TGGGCGGGCHHHH-HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCHHHHHHHHHhhcccccccCCcCCCCcceEEec------ccccccCcchhHH-HHHHHHHHHHHHHHH
Confidence            35566677778889999999999996       489998 89985      699999998  77 589999999999999


Q ss_pred             hhCC--CCCcHHHHHHhhhhhHHHhcC-----CCCcccccCCcCCccccccCCC---CCCCCCC------------CCHH
Q 039585          190 DACP--GVVSCADILTASTRNLVVMAG-----GPRFNVSFGRKDGLVSQAARIP---GNLPTNN------------MTMD  247 (368)
Q Consensus       190 ~~cp--~~VScADilalAa~~av~~~G-----GP~~~v~~GR~D~~~s~~~~~~---~~lP~p~------------~~~~  247 (368)
                      ++|+  ++|||||||+||||+||+++|     ||.|+|.+||+|++++.. +++   ..+|.++            .+++
T Consensus       520 ~~c~~~~~VScADlIaLAg~~AVe~ag~~~g~GP~vpf~~GR~Da~~~~t-d~~s~~~LlP~pdgfrny~~~~~~~~~~~  598 (737)
T 3vli_A          520 DSRSDGTQVSLADLIVLGGNAAVEQAAANAGYDVEIPFEPGRVDAGPEHT-DAPSFDALKPKVDGVRNYIQDDITRPAEE  598 (737)
T ss_dssp             HHCCSSBCCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCCBCCGGGC-CHHHHGGGCCSEETTTTEECTTCSSCHHH
T ss_pred             hhcCCCCcccHHHHHHHHHHHHHHHhhhhcCCCCcccccCCCcCCCccCc-cccccccCCCCCccccccccccccCCcHH
Confidence            9997  589999999999999999999     999999999999998753 221   2358775            5699


Q ss_pred             HHHHHHHHCCCChhhhhhhcccc-eeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCC
Q 039585          248 EILKMFASKGFSIQEYVALMGAH-TIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMS  326 (368)
Q Consensus       248 ~l~~~F~~~Gl~~~dlVaLsGaH-tiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~t  326 (368)
                      .|+++|+++||+.+|||||+||| |||++||.++       .|                               .++ .|
T Consensus       599 ~Lid~F~~~GLs~~EmVaLsGaH~TlG~~hc~s~-------~G-------------------------------~~t-~t  639 (737)
T 3vli_A          599 VLVDNADLLNLTASELTALIGGMRSIGANYQDTD-------LG-------------------------------VFT-DE  639 (737)
T ss_dssp             HHHHHHHHTTCCHHHHHHHHHHHHHHCCCGGGCC-------TT-------------------------------CCC-SS
T ss_pred             HHHHHHHHcCCCHHHHHHhhcchhhcccccccCC-------CC-------------------------------CCC-CC
Confidence            99999999999999999999998 9999999642       01                               122 58


Q ss_pred             CCccchhhhhhcccc----------ccccc---------------cchhcccCCChHHHHHHhhhC
Q 039585          327 PGKFDNSYFRGLPRG----------LGLLR---------------VDNMLVKDPRTKPLVDQYASN  367 (368)
Q Consensus       327 p~~FDN~Yy~~ll~~----------~glL~---------------SD~~L~~d~~t~~~V~~yA~d  367 (368)
                      |.+|||+||+||+.+          +|+|.               ||++|++|++||.+|+.||+|
T Consensus       640 P~~FDN~YF~nLL~~~~~W~~~~~~~gl~e~~d~~tg~~~~~~~~SD~~L~sd~~tr~~ve~YA~d  705 (737)
T 3vli_A          640 PETLTNDFFVNLLDMGTEWEPAADSEHRYKGLDRDTGEVKWEATRIDLIFGSNDRLRAISEVYGSA  705 (737)
T ss_dssp             TTSCCSHHHHHHHCTTEEEEECTTCSSCEEEEETTTCCEEEEECHHHHGGGTSHHHHHHHHHHTST
T ss_pred             CCccCHHHHHHHHhCCcccccCCCCCCceeeeccCccceeeccchhhhhhccChhHHHHHHHHhcc
Confidence            999999999999998          78874               999999999999999999987

>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A*

Probab=100.00  E-value=6.3e-45  Score=381.99  Aligned_cols=201  Identities=18%  Similarity=0.216  Sum_probs=173.1

Q ss_pred             HHHhhhhccCCccchhhhhhhhhcccc-------cCCCc-eeeeccCCCCcccccccccC--CCCcchhHHHHHHHHHHH
Q 039585          120 EFVHQKQTQSPSTAAGALRVFMHDCFV-------DGCDG-SVLISSNAFNVAERDSDINL--SLPGDAFDVVIKIKNALE  189 (368)
Q Consensus       120 ~~v~~~~~~~~~~a~~llRl~FHDc~v-------~GcDg-Sill~~~~~~~~E~~~~~N~--~l~~~~~~~i~~iK~~le  189 (368)
                      ..+++.+....-.++.||||+||||.+       ||||| +|+|.      .|+++.+|.  +| .++|++|+.||+++|
T Consensus       464 ~~lk~~~~~~gl~~~~lvrlAwhdA~Tf~~sd~~GGanGa~Ir~~------pEk~~~~N~p~~L-~~~~~vle~IK~~~e  536 (748)
T 3n3r_A          464 AELKAKVLASGLTVSQLVSTAWAAASTFRGSDKRGGANGARIRLA------PQKDWEANQPEQL-AAVLETLEAIRTAFN  536 (748)
T ss_dssp             HHHHHHHHHTTCCHHHHHHHHHHHHTTCCTTTCCCSSTBCGGGST------TGGGCGGGCHHHH-HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCHHHHHHHHHHHhccccccCCCCCCCCceEEcc------ccccccCcchHHH-HHHHHHHHHHHHHHH
Confidence            345666666677799999999999954       89999 78775      699999998  77 589999999999999


Q ss_pred             hhCC--CCCcHHHHHHhhhhhHHHhcC-----CCCcccccCCcCCccccccCCC--CCC-CCCC---------C---CHH
Q 039585          190 DACP--GVVSCADILTASTRNLVVMAG-----GPRFNVSFGRKDGLVSQAARIP--GNL-PTNN---------M---TMD  247 (368)
Q Consensus       190 ~~cp--~~VScADilalAa~~av~~~G-----GP~~~v~~GR~D~~~s~~~~~~--~~l-P~p~---------~---~~~  247 (368)
                      +.|+  ++|||||||+||||+||+.+|     ||.|+|.+||+|++++.. +++  ..| |.++         .   +++
T Consensus       537 ~~c~~~~~VScADiIaLAg~~AVe~ag~~~G~Gp~vpf~~GR~Dat~~~t-d~~s~~~L~P~pdgfrny~~~~~~~~~~~  615 (748)
T 3n3r_A          537 GAQRGGKQVSLADLIVLAGCAGVEQAAKNAGHAVTVPFAPGRADASQEQT-DVESMAVLEPVADGFRNYLKGKYRVPAEV  615 (748)
T ss_dssp             HTCSTTCCCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCCBCCSTTC-CHHHHGGGCCSEEGGGTEESSCCSSCHHH
T ss_pred             HhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCCCCCCc-cccccccCCCCCCccccccccccccCcHH
Confidence            9997  589999999999999999998     999999999999998743 221  245 8765         2   489


Q ss_pred             HHHHHHHHCCCChhhhhhhccc-ceeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCC
Q 039585          248 EILKMFASKGFSIQEYVALMGA-HTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMS  326 (368)
Q Consensus       248 ~l~~~F~~~Gl~~~dlVaLsGa-HtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~t  326 (368)
                      .|+++|+++||+.+|||||+|| ||||++||.++.       |                               .++ .|
T Consensus       616 ~Lid~F~~~GLs~~EmVaLsGa~HTlG~~h~~s~~-------G-------------------------------~~t-~t  656 (748)
T 3n3r_A          616 LLVDKAQLLTLSAPEMTVLLGGLRVLGANVGQSRH-------G-------------------------------VFT-AR  656 (748)
T ss_dssp             HHHHHHHHTTCCHHHHHHHHHHHHHHTCSGGGCCT-------T-------------------------------CCC-SS
T ss_pred             HHHHHHHHcCCChHHHHhhcccceecccccccCCC-------C-------------------------------CCC-CC
Confidence            9999999999999999999999 999999996530       1                               122 58


Q ss_pred             CCccchhhhhhcccc----------cccc---------------ccchhcccCCChHHHHHHhhhC
Q 039585          327 PGKFDNSYFRGLPRG----------LGLL---------------RVDNMLVKDPRTKPLVDQYASN  367 (368)
Q Consensus       327 p~~FDN~Yy~~ll~~----------~glL---------------~SD~~L~~d~~t~~~V~~yA~d  367 (368)
                      |.+|||+||+||+.+          +|+|               +||++|++|++||.+|+.||+|
T Consensus       657 P~~fDN~YF~nLl~~~~~w~~~~~~~gl~eg~dr~tg~~~~~~l~SD~~L~sd~~tr~~ve~YA~d  722 (748)
T 3n3r_A          657 EQALTNDFFVNLLDMGTEWKPTAADADVFEGRDRATGELKWTGTRVDLVFGSHSQLRALAEVYGSA  722 (748)
T ss_dssp             TTSCCSHHHHHHTCTTEEEEECSSCTTEEEEEETTTCCEEEEEEHHHHGGGTSHHHHHHHHHHTST
T ss_pred             CCccCHHHHHHHHhCCccccccCCCCceeeeecCCccceeeecchhhhHhhcCchHHHHHHHHhcc
Confidence            999999999999998          7886               5999999999999999999987

>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15}

Probab=100.00  E-value=2.9e-44  Score=377.13  Aligned_cols=199  Identities=19%  Similarity=0.241  Sum_probs=170.1

Q ss_pred             HHhhhhccC-Cccchhhhhhhhhccc-------ccCCCc-eeeeccCCCCcccccccccC--CCCcchhHHHHHHHHHHH
Q 039585          121 FVHQKQTQS-PSTAAGALRVFMHDCF-------VDGCDG-SVLISSNAFNVAERDSDINL--SLPGDAFDVVIKIKNALE  189 (368)
Q Consensus       121 ~v~~~~~~~-~~~a~~llRl~FHDc~-------v~GcDg-Sill~~~~~~~~E~~~~~N~--~l~~~~~~~i~~iK~~le  189 (368)
                      .+++.+... .-.++.||||+||||.       .||||| ||+|.      .|+++..|+  +| .++|++|+.||+++|
T Consensus       478 ~lk~~~~~~~gl~~~~lvrlAwhdA~Tf~~sd~~GGanGasIrl~------pEk~~~~N~p~~L-~~~~~vle~Ik~~~e  550 (764)
T 3ut2_A          478 KLKAAILSTDGLDVSKLASTAMACATTYRNSDKRGGCNGARIALE------PQRNWVSNNPTQL-SAVLDALKKVQSDFN  550 (764)
T ss_dssp             HHHHHHHTSTTCCHHHHHHHHHHHHTTCBTTTTBCSSTBCGGGST------TGGGCGGGCHHHH-HHHHHHHHHHHHHHT
T ss_pred             HHHHHHHhcCCCCHHHHHHHHHhhccccccccccCCCCcceEEec------cccccccccchhH-HHHHHHHHHHHHHHH
Confidence            445555444 6678999999999994       589998 89985      699999998  77 589999999999999


Q ss_pred             hhCCC--CCcHHHHHHhhhhhHHHhcC-----CCCcccccCCcCCccccccCCC--CCC-CCCC------------CCHH
Q 039585          190 DACPG--VVSCADILTASTRNLVVMAG-----GPRFNVSFGRKDGLVSQAARIP--GNL-PTNN------------MTMD  247 (368)
Q Consensus       190 ~~cp~--~VScADilalAa~~av~~~G-----GP~~~v~~GR~D~~~s~~~~~~--~~l-P~p~------------~~~~  247 (368)
                      ++ ++  +|||||||+||||+||+++|     ||.|+|.+||+|++++. .+++  ..| |.++            ..++
T Consensus       551 ~~-~g~~~VScADlIaLAg~~AV~~ag~~~G~gP~vpf~~GR~Dat~~~-td~~s~~~LeP~~dgfrny~~~~~~~~~~~  628 (764)
T 3ut2_A          551 GS-NGNKKVSLADLIVLGGTAAVEKAAKDAGVDIKVPFSAGRVDATQEQ-TDVTQFSYLEPQADGFRNYGRGTARARTEE  628 (764)
T ss_dssp             TT-STTBCCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCCBCCGGG-SCHHHHHTTCCSEETTTTEECCBTTBCHHH
T ss_pred             hc-CCCCcccHHHHHHHHHHHHHHHhhhccCCCCeeeecCCCCCCCccc-cccccccCCCCCCccccccccccccCChHH
Confidence            98 65  89999999999999999999     99999999999999874 3321  356 7653            3458


Q ss_pred             HHHHHHHHCCCChhhhhhhccc-ceeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCC
Q 039585          248 EILKMFASKGFSIQEYVALMGA-HTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMS  326 (368)
Q Consensus       248 ~l~~~F~~~Gl~~~dlVaLsGa-HtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~t  326 (368)
                      .|+++|+++||+..|||||+|| ||||++||.+|.       |                               .+ +.|
T Consensus       629 ~Li~~F~~~GLs~~EmVaLsGa~HTlG~~hc~s~~-------G-------------------------------~~-t~t  669 (764)
T 3ut2_A          629 IMVDKASQLTLTPPELTVLVGGMRALGANYDGSDV-------G-------------------------------VF-TAN  669 (764)
T ss_dssp             HHHHHHHHTTCCHHHHHHHHHHHHHTTCCTTCCCT-------T-------------------------------CC-CSS
T ss_pred             HHHHHHHHcCCCHHHHHHhhcCceeccccccCCCC-------C-------------------------------CC-CCC
Confidence            8999999999999999999999 999999998761       1                               12 258


Q ss_pred             CCccchhhhhhccc----------ccccc---------------ccchhcccCCChHHHHHHhhhC
Q 039585          327 PGKFDNSYFRGLPR----------GLGLL---------------RVDNMLVKDPRTKPLVDQYASN  367 (368)
Q Consensus       327 p~~FDN~Yy~~ll~----------~~glL---------------~SD~~L~~d~~t~~~V~~yA~d  367 (368)
                      |.+|||+||+||+.          ++|+|               +||++|++|++||.+|+.||+|
T Consensus       670 P~~fDN~YF~nLl~~~~~w~~~~~~~gl~eg~dr~tG~~~~~~l~SD~~L~sds~tra~ve~YA~d  735 (764)
T 3ut2_A          670 KGKLTPDFFVNLVDMNIAWTASGADGESWVGTDRKSRSEKYKGSRADLVFGSHAELRAIAEVYAEN  735 (764)
T ss_dssp             TTSCCSHHHHHHTCTTEEEEECSSSSCEEEEEETTTCCEEEEEEHHHHGGGTSHHHHHHHHHHHST
T ss_pred             CCcCCHHHHHHHHhcccccccCCCCCcceEeecCCCCceeeecChhHhhhhcCHHHHHHHHHHhCc
Confidence            99999999999999          67776               7999999999999999999987

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	368
d1fhfa_	304	a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine m	2e-85
d1pa2a_	306	a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A	6e-84
d1qgja_	300	a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A	4e-80
d1gwua_	307	a.93.1.1 (A:) Plant peroxidase {Horseradish (Armor	1e-79
d1scha_	294	a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hy	4e-79
d1bgpa_	309	a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vu	9e-79
d1yyda1	357	a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {	2e-38
d1llpa_	343	a.93.1.1 (A:) Fungal peroxidase (ligninase) {White	5e-36
d2e39a1	336	a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {	1e-35
d1oafa_	250	a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glyci	3e-27
d1iyna_	275	a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco	5e-24
d2euta1	291	a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {B	2e-22
d1pq1a_	196	f.1.4.1 (A:) Apoptosis regulator Bcl-xL {Mouse (Mu	7e-04
d2ccaa2	285	a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Myc	0.003

>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 304

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

 Score =  259 bits (662), Expect = 2e-85
 Identities = 96/269 (35%), Positives = 141/269 (52%), Gaps = 4/269 (1%)

Query: 102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN 161
           L   +Y+ TCP+   IV   +       P   A  +R+  HDCFV GCDGSVL+++    
Sbjct: 2   LTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTI 61

Query: 162 VAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVS 221
            +E+D+  N++      DVV  IK A+E++CP  VSCADIL  +     V+ GGP + V 
Sbjct: 62  ESEQDALPNINS-IRGLDVVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVP 120

Query: 222 FGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKEFS 281
            GR+D L +       NLP     + ++   FA +G +  + V L G HT G A C  F 
Sbjct: 121 LGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTLDLVTLSGGHTFGRARCSTFI 180

Query: 282 DRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLPRG 341
           +RL+ F+     DP LN  Y E L+A C  +     +T   D+ +P +FDN Y+  L + 
Sbjct: 181 NRLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNLTNL-DLSTPDQFDNRYYSNLLQL 239

Query: 342 LGLLRVDNMLVKDP--RTKPLVDQYASNE 368
            GLL+ D  L   P   T P+V+ ++SN+
Sbjct: 240 NGLLQSDQELFSTPGADTIPIVNSFSSNQ 268

>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Length = 306

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]

 Score =  255 bits (652), Expect = 6e-84
 Identities = 96/269 (35%), Positives = 143/269 (53%), Gaps = 4/269 (1%)

Query: 102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN 161
           L A +Y  TCP+   IVR  + Q         A  +R+  HDCFV+GCD S+L+      
Sbjct: 3   LNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTGSI 62

Query: 162 VAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVS 221
            +E+++  N++     F+VV  IK ALE+ACPGVVSC+D+L  ++   V +AGGP + V 
Sbjct: 63  QSEKNAGPNVNSA-RGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVL 121

Query: 222 FGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKEFS 281
            GR+D L +  A    ++P+   ++  I   F++ G +  + VAL GAHT G A C  F+
Sbjct: 122 LGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGRARCGVFN 181

Query: 282 DRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLPRG 341
           +RLF F+     DP LN      L+  C  +  + +     D+ +P  FDN+YF  L   
Sbjct: 182 NRLFNFSGTGNPDPTLNSTLLSTLQQLCPQN-GSASTITNLDLSTPDAFDNNYFANLQSN 240

Query: 342 LGLLRVDNMLV--KDPRTKPLVDQYASNE 368
            GLL+ D  L       T  +V  +ASN+
Sbjct: 241 DGLLQSDQELFSTTGSSTIAIVTSFASNQ 269

>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Length = 300

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]

 Score =  245 bits (626), Expect = 4e-80
 Identities = 105/271 (38%), Positives = 147/271 (54%), Gaps = 10/271 (3%)

Query: 102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN 161
           L  D Y  +CP+  +IVR+ V          AA  +R+  HDCFV+GCD S+L+      
Sbjct: 2   LSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGAD-- 59

Query: 162 VAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVS 221
            +E+ +  N++     F+V+  IK A+E+ACPGVVSCADILT + R+ VV++GGP + V+
Sbjct: 60  -SEKLAIPNINSA-RGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVA 117

Query: 222 FGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKEFS 281
            GRKDGLV+       NLP+    +D I+  F +   +I + VAL GAHT G A C  FS
Sbjct: 118 LGRKDGLVANQN-SANNLPSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQAKCAVFS 176

Query: 282 DRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLPRG 341
           +RLF F      D  L       L+  C     N  +TA  D  +   FDN+YF+ L  G
Sbjct: 177 NRLFNFTGAGNPDATLETSLLSNLQTVCPLG-GNSNITAPLDRSTTDTFDNNYFKNLLEG 235

Query: 342 LGLLRVDNMLVKDP----RTKPLVDQYASNE 368
            GLL  D +L         TK LV+ Y+ ++
Sbjct: 236 KGLLSSDQILFSSDLAVNTTKKLVEAYSRSQ 266

>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Length = 307

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Horseradish (Armoracia rusticana) [TaxId: 3704]

 Score =  244 bits (623), Expect = 1e-79
 Identities = 93/271 (34%), Positives = 138/271 (50%), Gaps = 6/271 (2%)

Query: 102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN 161
           L   +Y  +CP+   IVR+ +  +    P  AA  LR+  HDCFV+GCD S+L+ +    
Sbjct: 3   LTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSF 62

Query: 162 VAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVS 221
             E+D+  N +     F V+ ++K A+E ACP  VSCAD+LT + +  V +AGGP + V 
Sbjct: 63  RTEKDAFGNANSA-RGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 121

Query: 222 FGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKG-FSIQEYVALMGAHTIGFAHCKEF 280
            GR+D L +       NLP    T+ ++   F + G     + VAL G HT G   C+  
Sbjct: 122 LGRRDSLQAFLDLANANLPGPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFI 181

Query: 281 SDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLPR 340
            DRL+ F+     DP LN  Y + L+  C  +     +  F D+ +P  FDN Y+  L  
Sbjct: 182 MDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDF-DLRTPTIFDNKYYVNLEE 240

Query: 341 GLGLLRVDNMLVKDP---RTKPLVDQYASNE 368
             GL++ D  L   P    T PLV  +A++ 
Sbjct: 241 QKGLIQSDQELFSSPNATDTIPLVRSFANST 271

>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 294

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Peanut (Arachis hypogaea) [TaxId: 3818]

 Score =  242 bits (619), Expect = 4e-79
 Identities = 92/267 (34%), Positives = 141/267 (52%), Gaps = 9/267 (3%)

Query: 102 LRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN 161
           L +++Y T CP+    ++  V+    +     A  LR+  HDCFV GCD SVL+   +  
Sbjct: 2   LSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNF 61

Query: 162 VAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVS 221
             E+ +  N +     F+V+  IK+ +E  CPGVVSCADIL  + R+ VV  GG  +NV 
Sbjct: 62  TGEKTAGPNANSI-RGFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVL 120

Query: 222 FGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKEFS 281
            GR+D   +  +    +LP     +  ++  F++KGF+ +E V L GAHTIG A C  F 
Sbjct: 121 LGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQAQCTAFR 180

Query: 282 DRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLPRG 341
            R++        +  ++P YA++L+A C +   +  ++ F DV +P KFDN+Y+  L   
Sbjct: 181 TRIYN-------ESNIDPTYAKSLQANCPSVGGDTNLSPF-DVTTPNKFDNAYYINLRNK 232

Query: 342 LGLLRVDNMLVKDPRTKPLVDQYASNE 368
            GLL  D  L     T   V  Y++N 
Sbjct: 233 KGLLHSDQQLFNGVSTDSQVTAYSNNA 259

>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Length = 309

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]

 Score =  242 bits (618), Expect = 9e-79
 Identities = 100/275 (36%), Positives = 142/275 (51%), Gaps = 9/275 (3%)

Query: 96  PSAKPALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLI 155
           P   P L  D+Y  TCP  E IVREFV +   +    AAG LR+  HDCFV GCD SVL+
Sbjct: 3   PPVAPGLSFDFYWQTCPRAESIVREFVQEAVRKDIGLAAGLLRLHFHDCFVQGCDASVLL 62

Query: 156 SSNAFNVAERDSDINLSLPGDAFDVVIKIKNALEDACPG-VVSCADILTASTRNLVVMAG 214
             +A    E+ +  NL+L   AF  V  I++ LE  C G VVSC+DIL  + R+ VV++G
Sbjct: 63  DGSATGPGEQQAPPNLTLRPSAFKAVNDIRDRLERECRGAVVSCSDILALAARDSVVVSG 122

Query: 215 GPRFNVSFGRKDGLVSQAAR-IPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIG 273
           GP + V  GR+D     + + +  +LP  +  +  +L +    G    + V + G HTIG
Sbjct: 123 GPDYRVPLGRRDSRSFASTQDVLSDLPGPSSNVQSLLALLGRLGLDATDLVTISGGHTIG 182

Query: 274 FAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNS 333
            AHC  F DRLF         P ++P +   LK  C     +       DV +P  FDN 
Sbjct: 183 LAHCSSFEDRLFPRPD-----PTISPTFLSRLKRTCPAKGTDRRTVL--DVRTPNVFDNK 235

Query: 334 YFRGLPRGLGLLRVDNMLVKDPRTKPLVDQYASNE 368
           Y+  L    GL   D  L  +  T+P+V+++A ++
Sbjct: 236 YYIDLVNREGLFVSDQDLFTNAITRPIVERFAQSQ 270

>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 357

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Fungal peroxidase (ligninase)
species: Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]

 Score =  138 bits (349), Expect = 2e-38
 Identities = 49/272 (18%), Positives = 91/272 (33%), Gaps = 35/272 (12%)

Query: 110 TCPDFEKIVREFVHQ-KQTQSPSTAAGALRVFMHDCFV----------DGCDGSVLISSN 158
            C  F  + ++      Q +    A   +R+  HD              G DGS+L+   
Sbjct: 13  ACCAFIPLAQDLQETIFQNECGEDAHEVIRLTFHDAIAISRSQGPKAGGGADGSMLL--- 69

Query: 159 AFNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVV-MAGGPR 217
            F   E +   N  +  D+ + +I             +S AD++  +    +    G PR
Sbjct: 70  -FPTVEPNFSANNGI-DDSVNNLIPFM-----QKHNTISAADLVQFAGAVALSNCPGAPR 122

Query: 218 FNVSFGRKDGLVSQAARIPGNLPTNNMTMDEIL-KMFASKGFSIQEYVALMGAHTIGFAH 276
                GR +  ++      G +P    ++ +IL +   + GF+  E V+L+ +H++  A 
Sbjct: 123 LEFLAGRPNKTIAAVD---GLIPEPQDSVTKILQRFEDAGGFTPFEVVSLLASHSVARAD 179

Query: 277 CKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFR 336
             + +     F     T       + E L                 +             
Sbjct: 180 KVDQTIDAAPFDSTPFTFD--TQVFLEVLLKGVG-------FPGSANNTGEVASPLPLGS 230

Query: 337 GLPRGLGLLRVDNMLVKDPRTKPLVDQYASNE 368
           G   G   L+ D  L  DPRT  +   + + +
Sbjct: 231 GSDTGEMRLQSDFALAHDPRTACIWQGFVNEQ 262

>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 343

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Fungal peroxidase (ligninase)
species: White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]

 Score =  132 bits (332), Expect = 5e-36
 Identities = 44/276 (15%), Positives = 84/276 (30%), Gaps = 47/276 (17%)

Query: 110 TCPDFEKIVREFV--HQKQTQSPSTAAGALRVFMHDCFV-------------DGCDGSVL 154
           +C  +  ++ +         Q  + A  ++R+  HD                 G DGS++
Sbjct: 13  SCCAWFDVLDDIQANMFHGGQCGAEAHESIRLVFHDSIAISPAMEAKGKFGGGGADGSIM 72

Query: 155 ISSNAFNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILT-ASTRNLVVMA 213
           I    F+  E     N+ L  +   +               V+  D +  A    L    
Sbjct: 73  I----FDTIETAFHPNIGL-DEVVAMQKPFVQKHG------VTPGDFIAFAGAVALSNCP 121

Query: 214 GGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASK-GFSIQEYVALMGAHTI 272
           G P+ N   GRK    +      G +P    T+D+I+        F   E V ++ AH++
Sbjct: 122 GAPQMNFFTGRKP---ATQPAPDGLVPEPFHTVDQIIARVNDAGEFDELELVWMLSAHSV 178

Query: 273 GFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDN 332
              +  + + +   F          +  + E                           + 
Sbjct: 179 AAVNDVDPTVQGLPFDSTPGIFD--SQFFVETQFRGTLF--------------PGSGGNQ 222

Query: 333 SYFRGLPRGLGLLRVDNMLVKDPRTKPLVDQYASNE 368
                   G   ++ D+ L +D RT      +  N+
Sbjct: 223 GEVESGMAGEIRIQTDHTLARDSRTACEWQSFVGNQ 258

>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Length = 336

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Fungal peroxidase (ligninase)
species: Arthromyces ramosus [TaxId: 5451]

 Score =  130 bits (329), Expect = 1e-35
 Identities = 48/287 (16%), Positives = 78/287 (27%), Gaps = 57/287 (19%)

Query: 109 TTCPDFEKIVRE----FVHQKQ---------TQSPSTAAGALRVFMHDCFV--------- 146
            TCP  +         +              ++  S     LR+  HD            
Sbjct: 2   VTCPGGQSTSNSQCCVWFDVLDDLQTNFYQGSKCESPVRKILRIVFHDAIGFSPALTAAG 61

Query: 147 ----DGCDGSVLISSNAFNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADIL 202
                G DGS++      +  E     N  L  D  + +  +           VS  D++
Sbjct: 62  QFGGGGADGSIIA----HSNIELAFPANGGL-TDTIEALRAVGINHG------VSFGDLI 110

Query: 203 T-ASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQ 261
             A+   +    G PR     GR +         P  +P    T+  IL      GFS  
Sbjct: 111 QFATAVGMSNCPGSPRLEFLTGRSNSSQPSP---PSLIPGPGNTVTAILDRMGDAGFSPD 167

Query: 262 EYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAF 321
           E V L+ AH++        +       P   T    + ++                    
Sbjct: 168 EVVDLLAAHSLASQEGLNSAIFRS---PLDSTPQVFDTQFYIETLLKG------------ 212

Query: 322 NDVMSPGKFDNSYFRGLPRGLGLLRVDNMLVKDPRTKPLVDQYASNE 368
                      +       G   +R D +L +D RT        S+ 
Sbjct: 213 -TTQPGPSLGFAEELSPFPGEFRMRSDALLARDSRTACRWQSMTSSN 258

>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 250

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Ascorbate peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

 Score =  105 bits (264), Expect = 3e-27
 Identities = 68/276 (24%), Positives = 99/276 (35%), Gaps = 60/276 (21%)

Query: 100 PALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDC--FVDGCDGSVLISS 157
           P + ADY K      +K +R F+ +K+      A   LR+  H    F  G        +
Sbjct: 6   PTVSADYQKA-VEKAKKKLRGFIAEKRC-----APLMLRLAWHSAGTFDKGTKTGGPFGT 59

Query: 158 NAFNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPR 217
                AE           +  D+ +++   L+   P ++S AD    +    V + GGP 
Sbjct: 60  IKHP-AELAHS-----ANNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPE 112

Query: 218 FNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFA-SKGFSIQEYVALMGAHTIGFAH 276
                GR+D            LP      D +  +F  + G + Q+ VAL G HTIG AH
Sbjct: 113 VPFHPGREDKPEPPPEG---RLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAH 169

Query: 277 CKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFR 336
            +                                               +P  FDNSYF 
Sbjct: 170 KERSGFE-------------------------------------GPWTSNPLIFDNSYFT 192

Query: 337 GL----PRGLGLLRVDNMLVKDPRTKPLVDQYASNE 368
            L      GL  L  D  L+ DP  +PLVD+YA++E
Sbjct: 193 ELLSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADE 228

>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 275

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Ascorbate peroxidase
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

 Score = 97.9 bits (243), Expect = 5e-24
 Identities = 53/269 (19%), Positives = 92/269 (34%), Gaps = 39/269 (14%)

Query: 111 CPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFN-----VAER 165
                K  RE + ++  ++       +R+  HD      +          N       E 
Sbjct: 4   DSAQLKSAREDI-KELLKTKFCHPIMVRLGWHDAGTYNKNIEEWPQRGGANGSLRFDVEL 62

Query: 166 DSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRK 225
               N  L  +A +++  IK+         V+ AD+   ++   +  AGGP+  + +GR 
Sbjct: 63  KHGANAGL-VNALNLLKPIKD-----KYSGVTYADLFQLASATAIEEAGGPKIPMKYGRV 116

Query: 226 DGLVSQAARIPGNLPTN--NMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKEFSDR 283
           D    +     G LP          +  +F   G + +E VAL GAHT+G +        
Sbjct: 117 DVTEPEQCPEEGRLPDAGPPSPAQHLRDVFYRMGLNDKEIVALSGAHTLGRSRPDRSGWG 176

Query: 284 LFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGL----P 339
             +    +                              +      KFDNSYF+ +     
Sbjct: 177 KPETKYTKDGPG---------------------APGGQSWTAQWLKFDNSYFKDIKERRD 215

Query: 340 RGLGLLRVDNMLVKDPRTKPLVDQYASNE 368
             L +L  D  L +DP  K   ++YA++ 
Sbjct: 216 EDLLVLPTDAALFEDPSFKVYAEKYAADP 244

>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 291

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Cytochrome c peroxidase, CCP
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 93.6 bits (232), Expect = 2e-22
 Identities = 47/269 (17%), Positives = 76/269 (28%), Gaps = 39/269 (14%)

Query: 107 YKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFV-------DGCDGSVLISSNA 159
           ++         +RE    +           +R+  H            G  G        
Sbjct: 16  FQKVYNAIALKLRE--DDEYDNYIGYGPVLVRLAWHISGTWDKHDNTGGSYGGTYRFK-- 71

Query: 160 FNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFN 219
               E +   N  L  + F  +  I           +S  D+ +      V    GP+  
Sbjct: 72  ---KEFNDPSNAGL-QNGFKFLEPIHKEF-----PWISSGDLFSLGGVTAVQEMQGPKIP 122

Query: 220 VSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKE 279
              GR D          G LP  +     +   F     + +E VALMGAH +G  H K 
Sbjct: 123 WRCGRVDTPEDTTP-DNGRLPDADKDAGYVRTFFQRLNMNDREVVALMGAHALGKTHLKN 181

Query: 280 FSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLP 339
                   A N                       +        D        N+      
Sbjct: 182 SGYEGPGGAANN------------------VFTNEFYLNLLNEDWKLEKNDANNEQWDSK 223

Query: 340 RGLGLLRVDNMLVKDPRTKPLVDQYASNE 368
            G  +L  D  L++DP+   +V +YA+++
Sbjct: 224 SGYMMLPTDYSLIQDPKYLSIVKEYANDQ 252

>d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Length = 285

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: Catalase-peroxidase KatG
domain: Catalase-peroxidase KatG
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 36.7 bits (84), Expect = 0.003
 Identities = 19/129 (14%), Positives = 36/129 (27%), Gaps = 22/129 (17%)

Query: 244 MTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAE 303
                +L        S  E   L+G   +  A+ K     +F  A    T+         
Sbjct: 170 PAEYMLLDKANLLTLSAPEMTVLVGGLRVLGANYKRLPLGVFTEASESLTNDFFV----- 224

Query: 304 ALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGL----PRGLGLLRVDNMLVKDPRTKP 359
                         +        P   D+  ++G            RVD +   +   + 
Sbjct: 225 -------------NLLDMGITWEPSPADDGTYQGKDGSGKVKWTGSRVDLVFGSNSELRA 271

Query: 360 LVDQYASNE 368
           LV+ Y +++
Sbjct: 272 LVEVYGADD 280

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	368
d1fhfa_	304	Plant peroxidase {Soybean (Glycine max) [TaxId: 38	100.0
d1pa2a_	306	Plant peroxidase {Mouse-ear cress (Arabidopsis tha	100.0
d1qgja_	300	Plant peroxidase {Mouse-ear cress (Arabidopsis tha	100.0
d1gwua_	307	Plant peroxidase {Horseradish (Armoracia rusticana	100.0
d1bgpa_	309	Plant peroxidase {Barley (Hordeum vulgare), peroxi	100.0
d1scha_	294	Plant peroxidase {Peanut (Arachis hypogaea) [TaxId	100.0
d1iyna_	275	Ascorbate peroxidase {Common tobacco (Nicotiana ta	100.0
d1yyda1	357	Fungal peroxidase (ligninase) {Basidomycetos fungu	100.0
d2e39a1	336	Fungal peroxidase (ligninase) {Arthromyces ramosus	100.0
d1oafa_	250	Ascorbate peroxidase {Soybean (Glycine max) [TaxId	100.0
d1llpa_	343	Fungal peroxidase (ligninase) {White rot basidiomy	100.0
d2euta1	291	Cytochrome c peroxidase, CCP {Baker's yeast (Sacch	100.0
d1mwva2	308	Catalase-peroxidase KatG {Burkholderia pseudomalle	100.0
d1itka1	406	Catalase-peroxidase KatG {Archaeon Haloarcula mari	100.0
d1u2ka_	292	Catalase-peroxidase KatG {Burkholderia pseudomalle	100.0
d1mwva1	406	Catalase-peroxidase KatG {Burkholderia pseudomalle	100.0
d2ccaa2	285	Catalase-peroxidase KatG {Mycobacterium tuberculos	100.0
d1ub2a2	294	Catalase-peroxidase KatG {Synechococcus sp. pcc 79	100.0
d1itka2	308	Catalase-peroxidase KatG {Archaeon Haloarcula mari	100.0
d2ccaa1	410	Catalase-peroxidase KatG {Mycobacterium tuberculos	99.98
d1ub2a1	406	Catalase-peroxidase KatG {Synechococcus sp. pcc 79	99.97

>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=2.8e-85  Score=632.78  Aligned_cols=266  Identities=36%  Similarity=0.654  Sum_probs=254.9

Q ss_pred             ccccccccccCchHHHHHHHHHhhhhccCCccchhhhhhhhhcccccCCCceeeeccCCCCcccccccccCCCCcchhHH
Q 039585          101 ALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFNVAERDSDINLSLPGDAFDV  180 (368)
Q Consensus       101 ~L~~~fY~~sCp~~e~iV~~~v~~~~~~~~~~a~~llRl~FHDc~v~GcDgSill~~~~~~~~E~~~~~N~~l~~~~~~~  180 (368)
                      ||+.+||++|||++|+||++.|++.+.++++++++||||+||||||+||||||||+++.++.+|+++.+|.++ .+||++
T Consensus         1 qL~~~~Y~~sCp~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSill~~~~~~~~E~~~~~N~~~-~~g~~~   79 (304)
T d1fhfa_           1 QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTIESEQDALPNINS-IRGLDV   79 (304)
T ss_dssp             CCBTTTTTTTSTTHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTTTCSSSGGGCCCCSSCCCGGGSTTTTTT-CCCHHH
T ss_pred             CCCCccccccCcCHHHHHHHHHHHHHHhCCchhHHHHHHHHHhhccCCCCeeEeecCCCCccccccCCccccc-chhHHH
Confidence            6899999999999999999999999999999999999999999999999999999998888899999999874 399999


Q ss_pred             HHHHHHHHHhhCCCCCcHHHHHHhhhhhHHHhcCCCCcccccCCcCCccccccCCCCCCCCCCCCHHHHHHHHHHCCCCh
Q 039585          181 VIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSI  260 (368)
Q Consensus       181 i~~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~  260 (368)
                      ||.||++||+.||++|||||||+||||+||+++|||.|+|++||+|+++++..++.++||.++.++++|+++|++|||+.
T Consensus        80 id~iK~~le~~cp~~VScADIlalAardAv~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~  159 (304)
T d1fhfa_          80 VNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNT  159 (304)
T ss_dssp             HHHHHHHHHTTSTTTSCHHHHHHHHHHHHHHTTTCCCCCCCBCCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHHTTCCH
T ss_pred             HHHHHHHHHhhCCCccCHHHHHHHHHhhhhhhcCCCcccccCCCcCcCccccccccccCCCCCCCHHHHHHHHHHcCCCH
Confidence            99999999999999999999999999999999999999999999999999877777789999999999999999999999


Q ss_pred             hhhhhhcccceeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCCCCccchhhhhhccc
Q 039585          261 QEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLPR  340 (368)
Q Consensus       261 ~dlVaLsGaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~ll~  340 (368)
                      +|||||+||||||++||.+|..|+|+|.+++.+||++|+.|+..|++.|+..+ .+.+.+.+|..||.+|||+||++++.
T Consensus       160 ~d~VaLsGaHTiG~ahc~~~~~rl~~~~~~~~~d~~~~~~~~~~L~~~c~~~~-~~~~~~~~d~~tp~~fDn~Yy~~l~~  238 (304)
T d1fhfa_         160 LDLVTLSGGHTFGRARCSTFINRLYNFSNTGNPDPTLNTTYLEVLRARCPQNA-TGDNLTNLDLSTPDQFDNRYYSNLLQ  238 (304)
T ss_dssp             HHHHHHGGGGGSCEEEGGGTGGGTSCGGGSSSCCTTSCHHHHHHHHHHSCSSC-SSCCEEESCSSSTTSCSTHHHHHHHT
T ss_pred             HHHHHHhhhhhhcccccccccccccCCCCCCCCCcccCHHHHHHHHHhcCCCC-CCCcccccCCCCCCccccHHHHHHhh
Confidence            99999999999999999999999999999999999999999999999999765 56677889999999999999999999


Q ss_pred             cccccccchhcccCC--ChHHHHHHhhhCC
Q 039585          341 GLGLLRVDNMLVKDP--RTKPLVDQYASNE  368 (368)
Q Consensus       341 ~~glL~SD~~L~~d~--~t~~~V~~yA~d~  368 (368)
                      |+|||+|||+|+.|+  +|+.+|++||.||
T Consensus       239 ~~glL~SD~~L~~dp~~~t~~~V~~yA~d~  268 (304)
T d1fhfa_         239 LNGLLQSDQELFSTPGADTIPIVNSFSSNQ  268 (304)
T ss_dssp             TCCSSHHHHTTTSSTTCSSHHHHHHHHHCH
T ss_pred             cCcccHhhHHHHhCCCchHHHHHHHHhhCH
Confidence            999999999999996  7999999999885

>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]}

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]

Probab=100.00  E-value=2.5e-83  Score=620.29  Aligned_cols=266  Identities=36%  Similarity=0.659  Sum_probs=255.5

Q ss_pred             ccccccccccCchHHHHHHHHHhhhhccCCccchhhhhhhhhcccccCCCceeeeccCCCCcccccccccCCCCcchhHH
Q 039585          101 ALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFNVAERDSDINLSLPGDAFDV  180 (368)
Q Consensus       101 ~L~~~fY~~sCp~~e~iV~~~v~~~~~~~~~~a~~llRl~FHDc~v~GcDgSill~~~~~~~~E~~~~~N~~l~~~~~~~  180 (368)
                      ||+.+||+++||++|+||++.|++.+.+|++++++||||+||||||+||||||||+++.++.+|+++.+|.++ .+||++
T Consensus         2 ~L~~~~y~~~Cp~~e~iV~~~v~~~~~~d~~~aa~llRl~FHDCfv~GcD~Sill~~~~~~~~E~~~~~N~g~-~~g~~~   80 (306)
T d1pa2a_           2 QLNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTGSIQSEKNAGPNVNS-ARGFNV   80 (306)
T ss_dssp             CCBTTTTTTTCTTHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHTTTSSSSGGGCCCCSSCCCGGGSTTTTTT-CCCHHH
T ss_pred             CCCCccccccCcCHHHHHHHHHHHHHHhCCchhHHHHHHHHhhccCCCCceeeEecCCCCCccccCCCccCCc-hhHHHH
Confidence            7999999999999999999999999999999999999999999999999999999988888899999999985 399999


Q ss_pred             HHHHHHHHHhhCCCCCcHHHHHHhhhhhHHHhcCCCCcccccCCcCCccccccCCCCCCCCCCCCHHHHHHHHHHCCCCh
Q 039585          181 VIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSI  260 (368)
Q Consensus       181 i~~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~  260 (368)
                      |+.||++||+.||++||||||||||||+||+++|||+|+|++||+|+++|...+++++||.++.++++|+++|+++||+.
T Consensus        81 i~~iK~~~e~~cp~~VScADilalAardav~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gf~~  160 (306)
T d1pa2a_          81 VDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVLLGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNT  160 (306)
T ss_dssp             HHHHHHHHHHHSTTTCCHHHHHHHHHHHHHHHTTCCCCCCCBCCBBCSCCCHHHHHHHSCCTTSCHHHHHHHHHHHTCCH
T ss_pred             HHHHHHHHHhhcCCcccHHHHHHHHHHHHhhhcCCCEEEEeCCCcccccccccccccCCCCcccCHHHHHHHHHHcCCch
Confidence            99999999999999999999999999999999999999999999999999888888899999999999999999999999


Q ss_pred             hhhhhhcccceeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCCCCccchhhhhhccc
Q 039585          261 QEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLPR  340 (368)
Q Consensus       261 ~dlVaLsGaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~ll~  340 (368)
                      +|||||+||||||++||.+|..|+|+|.|++.+||++++.|+..|++.|++.+ +....+.+|..||.+|||+||+||+.
T Consensus       161 ~d~VaLsGaHTiG~ahc~~~~~r~~~~~~~~~~d~~~~~~f~~~l~~~c~~~~-~~~~~~~~D~~Tp~~fDn~Yy~~l~~  239 (306)
T d1pa2a_         161 NDLVALSGAHTFGRARCGVFNNRLFNFSGTGNPDPTLNSTLLSTLQQLCPQNG-SASTITNLDLSTPDAFDNNYFANLQS  239 (306)
T ss_dssp             HHHHHHHGGGGSSEEEGGGTGGGTSSGGGSSSCCTTSCHHHHHHHHHHSCTTS-CTTCEEESCSSSSSSCSTHHHHHHHT
T ss_pred             hhheeeecccccccccccccccCccCCCCCCCCCCCcCHHHHHHhhccCCCCC-CCCcccccCCCCCCcCCcHHHhhhhc
Confidence            99999999999999999999999999999999999999999999999999766 56667899999999999999999999


Q ss_pred             cccccccchhccc--CCChHHHHHHhhhCC
Q 039585          341 GLGLLRVDNMLVK--DPRTKPLVDQYASNE  368 (368)
Q Consensus       341 ~~glL~SD~~L~~--d~~t~~~V~~yA~d~  368 (368)
                      ++|||+|||+|+.  |++|+.+|++||.||
T Consensus       240 ~~glL~sD~~L~~~~d~~t~~~V~~yA~d~  269 (306)
T d1pa2a_         240 NDGLLQSDQELFSTTGSSTIAIVTSFASNQ  269 (306)
T ss_dssp             TCCSSHHHHHHHHSTTCTHHHHHHHHHHCH
T ss_pred             CCCcccChHHHhcCCCchHHHHHHHHhcCH
Confidence            9999999999985  789999999999874

>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]}

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]

Probab=100.00  E-value=6.4e-82  Score=608.69  Aligned_cols=262  Identities=40%  Similarity=0.687  Sum_probs=249.3

Q ss_pred             ccccccccccCchHHHHHHHHHhhhhccCCccchhhhhhhhhcccccCCCceeeeccCCCCcccccccccCCCCcchhHH
Q 039585          101 ALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFNVAERDSDINLSLPGDAFDV  180 (368)
Q Consensus       101 ~L~~~fY~~sCp~~e~iV~~~v~~~~~~~~~~a~~llRl~FHDc~v~GcDgSill~~~~~~~~E~~~~~N~~l~~~~~~~  180 (368)
                      ||+.+||+++||++|+||++.|++.+..|++++++||||+||||||+||||||||+.+   .+|+++.+|.++ .+|+++
T Consensus         1 qL~~~~y~~sCp~~e~iV~~~v~~~~~~d~~~a~~llRL~FHDcfv~GcD~Sill~~~---~~E~~~~~N~g~-~~~~~~   76 (300)
T d1qgja_           1 QLSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGA---DSEKLAIPNINS-ARGFEV   76 (300)
T ss_dssp             CCBTTTTTTTCTTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTTBSSSGGGCCST---TCGGGSTTTTTT-CCCHHH
T ss_pred             CCCCccccccCcCHHHHHHHHHHHHHHhCCchHHHHHHHHHHhcCCCCcceeEeeCCC---chhccCCCcCCc-ccchHH
Confidence            6899999999999999999999999999999999999999999999999999999854   379999999986 499999


Q ss_pred             HHHHHHHHHhhCCCCCcHHHHHHhhhhhHHHhcCCCCcccccCCcCCccccccCCCCCCCCCCCCHHHHHHHHHHCCCCh
Q 039585          181 VIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSI  260 (368)
Q Consensus       181 i~~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~  260 (368)
                      |+.||++||+.||++|||||||+||||+||+++|||.|+|++||+|+.++....+ .++|.++.++++|++.|+++||+.
T Consensus        77 i~~ik~~~e~~c~~~VScADi~alAardav~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~Gl~~  155 (300)
T d1qgja_          77 IDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVALGRKDGLVANQNSA-NNLPSPFEPLDAIIAKFVAVNLNI  155 (300)
T ss_dssp             HHHHHHHHHHHSTTTSCHHHHHHHHHHHHHHTTTCCCCCCCBCCCBCSSCCHHHH-TTSCCTTSCHHHHHHHHHTTTCCH
T ss_pred             HHHHHHHHHhhCCCCcCHHHHHHHhhhhhHHhcCCCcccccCCCCccCccccccc-cCCCCCCCCHHHHHHHHHHcCCch
Confidence            9999999999999999999999999999999999999999999999999987655 469999999999999999999999


Q ss_pred             hhhhhhcccceeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCCCCccchhhhhhccc
Q 039585          261 QEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLPR  340 (368)
Q Consensus       261 ~dlVaLsGaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~ll~  340 (368)
                      +|||||+||||||++||.+|.+|+|+|.+++.+||++++.|+..|+..|++.+ ..+...++|..||.+|||+||+|++.
T Consensus       156 ~d~VaLsGAHTiG~ahc~~~~~rl~~~~~~~~~d~~~~~~~~~~l~~~c~~~~-~~~~~~~~d~~tp~~fDn~Yy~~l~~  234 (300)
T d1qgja_         156 TDVVALSGAHTFGQAKCAVFSNRLFNFTGAGNPDATLETSLLSNLQTVCPLGG-NSNITAPLDRSTTDTFDNNYFKNLLE  234 (300)
T ss_dssp             HHHHHHHGGGGSSEEEGGGTGGGTSCSSSSSCCCTTSCHHHHHHHHHHSCTTS-CTTCEEESSSSCSSSCSTHHHHHHHT
T ss_pred             hhhhhhcccccccccccccccccccCCCCCCCCCcccCHHHHHHhhhcCCCCC-CCCccccCCCCCcccccchhhhhhhc
Confidence            99999999999999999999999999999999999999999999999999766 56667899999999999999999999


Q ss_pred             cccccccchhcccCC----ChHHHHHHhhhCC
Q 039585          341 GLGLLRVDNMLVKDP----RTKPLVDQYASNE  368 (368)
Q Consensus       341 ~~glL~SD~~L~~d~----~t~~~V~~yA~d~  368 (368)
                      ++|||+|||+|+.|+    +|+.+|++||.||
T Consensus       235 ~~glL~SDq~L~~d~~~~~~t~~~V~~yA~d~  266 (300)
T d1qgja_         235 GKGLLSSDQILFSSDLAVNTTKKLVEAYSRSQ  266 (300)
T ss_dssp             TCCSSHHHHHHHHSTTTTTTTHHHHHHHHHCH
T ss_pred             cCCcchhhHHHhcCCcchhhHHHHHHHHhhCH
Confidence            999999999999995    6999999999985

>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]}

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Horseradish (Armoracia rusticana) [TaxId: 3704]

Probab=100.00  E-value=1.7e-80  Score=601.13  Aligned_cols=266  Identities=35%  Similarity=0.647  Sum_probs=254.6

Q ss_pred             ccccccccccCchHHHHHHHHHhhhhccCCccchhhhhhhhhcccccCCCceeeeccCCCCcccccccccCCCCcchhHH
Q 039585          101 ALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFNVAERDSDINLSLPGDAFDV  180 (368)
Q Consensus       101 ~L~~~fY~~sCp~~e~iV~~~v~~~~~~~~~~a~~llRl~FHDc~v~GcDgSill~~~~~~~~E~~~~~N~~l~~~~~~~  180 (368)
                      ||+.+||+++||++|+||++.|++.+.+|++++++||||+||||||+||||||||+++.++..|+++.+|.+| .+||++
T Consensus         2 ql~~~~y~~sCp~~e~iV~~~v~~~~~~d~~~a~~llRl~FHDcfv~GcD~Sill~~~~~~~~E~~~~~N~gl-~~g~~~   80 (307)
T d1gwua_           2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANS-ARGFPV   80 (307)
T ss_dssp             CCBTTTTTTTCTTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTTSSSSGGGCCCCSSSCCGGGSTTTTTT-CCCHHH
T ss_pred             CCCCccccccCcCHHHHHHHHHHHHHHhCCchhHHHHHHHHhhcCCCCCceeeeecCCCCCcccccCCCcCCc-chhHHH
Confidence            7999999999999999999999999999999999999999999999999999999998888899999999987 589999


Q ss_pred             HHHHHHHHHhhCCCCCcHHHHHHhhhhhHHHhcCCCCcccccCCcCCccccccCCCCCCCCCCCCHHHHHHHHHHCCCC-
Q 039585          181 VIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFS-  259 (368)
Q Consensus       181 i~~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~-  259 (368)
                      ||.||++||+.||++|||||||+||||+||+++|||.|+|++||+|++++....+.++||.++.+++++++.|.++||+ 
T Consensus        81 i~~iK~~~e~~cp~~VScADiialAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~g~~~  160 (307)
T d1gwua_          81 IDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPGPFFTLPQLKDSFRNVGLNR  160 (307)
T ss_dssp             HHHHHHHHHHHSTTTSCHHHHHHHHHHHHHHHTTCCCCCCCBCCBBCSSCCHHHHHHHSCCTTCCHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHHHHhccCCcCHHHHHHHHHHhhHHHcCCCccCCcCCCcCCCccccccccccCcccCCCHHHHHHHHHHccCCc
Confidence            9999999999999999999999999999999999999999999999999988777788999999999999999999998 


Q ss_pred             hhhhhhhcccceeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCCCCccchhhhhhcc
Q 039585          260 IQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLP  339 (368)
Q Consensus       260 ~~dlVaLsGaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~ll  339 (368)
                      .+|||+|+||||||++||.+|..|+|+|.+++.+|+.++..|+..|++.|+..+ ...+.+.+|..|+.+|||+||++++
T Consensus       161 ~~dlVaLsGaHTiG~ahc~~~~~r~~~~~~~~~pd~~~~~~f~~~L~~~c~~~~-~~~~~~~~d~~t~~~fDn~y~~~~~  239 (307)
T d1gwua_         161 SSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNG-NLSALVDFDLRTPTIFDNKYYVNLE  239 (307)
T ss_dssp             HHHHHHHHGGGGSCEEEGGGGHHHHHCGGGSSSCCTTSCHHHHHHHHHHSCTTS-CTTCEEESCSSCTTCCSTHHHHHHH
T ss_pred             HHHHHHHHhhhhhccccccccccccCCCCCCCCCCcccCHHHHHHHHhhCCCCC-CCCcccccCcccccccCchhccccc
Confidence            799999999999999999999999999999999999999999999999999765 5666788999999999999999999


Q ss_pred             ccccccccchhcccCC---ChHHHHHHhhhCC
Q 039585          340 RGLGLLRVDNMLVKDP---RTKPLVDQYASNE  368 (368)
Q Consensus       340 ~~~glL~SD~~L~~d~---~t~~~V~~yA~d~  368 (368)
                      .++|||+|||+|+.|+   +|+.+|++||+||
T Consensus       240 ~~~glL~SD~~L~~D~~~~~t~~~V~~yA~d~  271 (307)
T d1gwua_         240 EQKGLIQSDQELFSSPNATDTIPLVRSFANST  271 (307)
T ss_dssp             TTCCSSHHHHHHHHSTTTTTHHHHHHHHHHCH
T ss_pred             ccccccHHHHHHHhCCccchHHHHHHHHhhCH
Confidence            9999999999999996   4788999999985

>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]}

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]

Probab=100.00  E-value=3.9e-80  Score=598.84  Aligned_cols=264  Identities=38%  Similarity=0.712  Sum_probs=244.9

Q ss_pred             CCcccccccccccCchHHHHHHHHHhhhhccCCccchhhhhhhhhcccccCCCceeeeccCCCCcccccccccCCCCcch
Q 039585           98 AKPALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFNVAERDSDINLSLPGDA  177 (368)
Q Consensus        98 ~~~~L~~~fY~~sCp~~e~iV~~~v~~~~~~~~~~a~~llRl~FHDc~v~GcDgSill~~~~~~~~E~~~~~N~~l~~~~  177 (368)
                      +..+|+.+||++|||++|+||++.|++.+.+|++++++||||+||||||+||||||||+++.+...|++..+|.++..+|
T Consensus         5 ~~~~L~~~fY~~sCp~~e~iv~~~v~~~~~~d~~~~~~llRL~FHDCfv~GcDaSill~~~~~~~~~~~~~~~~~~~~~g   84 (309)
T d1bgpa_           5 VAPGLSFDFYWQTCPRAESIVREFVQEAVRKDIGLAAGLLRLHFHDCFVQGCDASVLLDGSATGPGEQQAPPNLTLRPSA   84 (309)
T ss_dssp             CCTTCBTTTTTTTCTTHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHTTSSSSGGGSTTSTTSTTCCSSCGGGCCCHHH
T ss_pred             ccccCcCCcccccCCCHHHHHHHHHHHHHHhCCchhHHHHHHHhhccCCCCceeeeeecCCCCCcccccCCCCCCccccc
Confidence            55679999999999999999999999999999999999999999999999999999999888777899999988775579


Q ss_pred             hHHHHHHHHHHHhhCCC-CCcHHHHHHhhhhhHHHhcCCCCcccccCCcCCccccc-cCCCCCCCCCCCCHHHHHHHHHH
Q 039585          178 FDVVIKIKNALEDACPG-VVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQA-ARIPGNLPTNNMTMDEILKMFAS  255 (368)
Q Consensus       178 ~~~i~~iK~~le~~cp~-~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~-~~~~~~lP~p~~~~~~l~~~F~~  255 (368)
                      |++|+.||++||+.||+ +|||||||+||||+||+++|||.|.|++||+|++++.. .+++++||.+..++++|++.|++
T Consensus        85 ~~~i~~~k~~~e~~cpg~~VScADilalAardav~~~GGP~~~v~~GR~D~~~s~~~~~~~~~lP~p~~~~~~l~~~F~~  164 (309)
T d1bgpa_          85 FKAVNDIRDRLERECRGAVVSCSDILALAARDSVVVSGGPDYRVPLGRRDSRSFASTQDVLSDLPGPSSNVQSLLALLGR  164 (309)
T ss_dssp             HHHHHHHHHHHHHHHTSSCSCHHHHHHHHHHHHHHHTTCCCCCCCBCEEBCCSCCCHHHHHHHSCCTTCCHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHhhCCCCcccHHHHHHHhhhhhhhhcCCceecccCCCccccccchhccccccCCCCcCCHHHHHHHHHH
Confidence            99999999999999997 89999999999999999999999999999999988753 34557899999999999999999


Q ss_pred             CCCChhhhhhhcccceeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCCCCccchhhh
Q 039585          256 KGFSIQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYF  335 (368)
Q Consensus       256 ~Gl~~~dlVaLsGaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy  335 (368)
                      |||+.+|||||+||||||++||.+|.+|+|+     .+||++++.|+..|+..|+... . +....+|..||.+|||+||
T Consensus       165 ~G~~~~e~VALsGAHTiG~ahc~~~~~r~~~-----~~dp~~~~~~~~~l~~~c~~~~-~-~~~~~~~~~tP~~fDn~Yy  237 (309)
T d1bgpa_         165 LGLDATDLVTISGGHTIGLAHCSSFEDRLFP-----RPDPTISPTFLSRLKRTCPAKG-T-DRRTVLDVRTPNVFDNKYY  237 (309)
T ss_dssp             TTCCHHHHHHHGGGGGSCEEEGGGTGGGTSS-----SCCTTSCHHHHHHHHHHCSSTT-C-CCEEESCSSCTTSCSTHHH
T ss_pred             cCCChhhheeeeeeccccccccccccCCCCC-----CCCCCcCHHHHHHhhccCCCCC-C-CcccccCCCCCCcCCcHHH
Confidence            9999999999999999999999999999986     3689999999999999998653 2 3344567789999999999


Q ss_pred             hhccccccccccchhcccCCChHHHHHHhhhCC
Q 039585          336 RGLPRGLGLLRVDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       336 ~~ll~~~glL~SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                      +||+.++|||+|||+|++|++|+.+|++||+||
T Consensus       238 ~~l~~~~glL~SD~~L~~D~~t~~~V~~yA~d~  270 (309)
T d1bgpa_         238 IDLVNREGLFVSDQDLFTNAITRPIVERFAQSQ  270 (309)
T ss_dssp             HHHHTTCCSSHHHHHHHHSTTTHHHHHHHHHCH
T ss_pred             HHhhcCceecHHHHHHhcCccHHHHHHHHhhCH
Confidence            999999999999999999999999999999985

>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]}

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Peanut (Arachis hypogaea) [TaxId: 3818]

Probab=100.00  E-value=4.1e-78  Score=581.08  Aligned_cols=259  Identities=36%  Similarity=0.659  Sum_probs=247.5

Q ss_pred             ccccccccccCchHHHHHHHHHhhhhccCCccchhhhhhhhhcccccCCCceeeeccCCCCcccccccccCCCCcchhHH
Q 039585          101 ALRADYYKTTCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFVDGCDGSVLISSNAFNVAERDSDINLSLPGDAFDV  180 (368)
Q Consensus       101 ~L~~~fY~~sCp~~e~iV~~~v~~~~~~~~~~a~~llRl~FHDc~v~GcDgSill~~~~~~~~E~~~~~N~~l~~~~~~~  180 (368)
                      +|+.+||+++||++|+||++.|++.+.+|++++++||||+||||||+||||||||+++.++..|+++++|.+| .+||++
T Consensus         1 ~l~~~~y~~~cp~~e~iv~~~v~~~~~~d~~~a~~llRl~FHDc~v~GcD~Sill~~~~~~~~E~~~~~N~gl-~~~~~~   79 (294)
T d1scha_           1 ELSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNFTGEKTAGPNANS-IRGFEV   79 (294)
T ss_dssp             CCBTTTTTTTCTTHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHTTTSSSSGGGCCCBTTBCCSTTSTTTTTT-CCCHHH
T ss_pred             CCCCccccccCcCHHHHHHHHHHHHHHhCCchhHHHHHHHHHhhcCCCCCceeeecCCCCccccccCCCcccc-chhHHH
Confidence            5899999999999999999999999999999999999999999999999999999998888899999999987 599999


Q ss_pred             HHHHHHHHHhhCCCCCcHHHHHHhhhhhHHHhcCCCCcccccCCcCCccccccCCCCCCCCCCCCHHHHHHHHHHCCCCh
Q 039585          181 VIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSI  260 (368)
Q Consensus       181 i~~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~  260 (368)
                      ||.||+++|+.||++|||||||+||||+||+.+|||.|.|++||+|+.++...++.++||.++.++++|++.|+++||+.
T Consensus        80 id~iK~~~e~~cp~~VS~ADiialAa~~av~~~gGp~~~~~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~G~~~  159 (294)
T d1scha_          80 IDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVLLGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTT  159 (294)
T ss_dssp             HHHHHHHHHHHSTTTSCHHHHHHHHHHHHHHHTTCCCCCCCBCCBBCSCCCHHHHHHHSCCTTCCHHHHHHHHHTTTCCH
T ss_pred             HHHHHHhhhhhCCCcccHHHHHHHhhhhhehhcCCccccchhcccCccccchhccccCCCCCcCCHHHHHHHHHHcCCCc
Confidence            99999999999999999999999999999999999999999999999999887777899999999999999999999999


Q ss_pred             hhhhhhcccceeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCCCCccchhhhhhccc
Q 039585          261 QEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLPR  340 (368)
Q Consensus       261 ~dlVaLsGaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~ll~  340 (368)
                      +|||+|+||||||++||.+|..|+|+       ++.+++.|+..|+..|+..+ ++...+.+|..||++|||+||++++.
T Consensus       160 ~e~VaL~GaHTiG~~~c~~~~~rl~~-------~~~~~~~~~~~L~~~c~~~~-~~~~~~~~d~~tp~~fdn~y~~~~~~  231 (294)
T d1scha_         160 KELVTLSGAHTIGQAQCTAFRTRIYN-------ESNIDPTYAKSLQANCPSVG-GDTNLSPFDVTTPNKFDNAYYINLRN  231 (294)
T ss_dssp             HHHHHHHGGGGBCEEEHHHHHHHHHH-------CSSSCHHHHHHHHTTSCSSS-CTTCEEESCSSSTBSCSTHHHHHHHT
T ss_pred             ccceeeeccceeccccccccCCCccC-------CCCCCHHHHHHHHHhccCCC-CCccccccCCCCCCcccchhhhhhcc
Confidence            99999999999999999999999985       67899999999999999765 55567788999999999999999999


Q ss_pred             cccccccchhcccCCChHHHHHHhhhCC
Q 039585          341 GLGLLRVDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       341 ~~glL~SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                      ++|||+|||+|+.|++|+.+|++||+||
T Consensus       232 ~~~ll~SD~~L~~D~~t~~~V~~yA~d~  259 (294)
T d1scha_         232 KKGLLHSDQQLFNGVSTDSQVTAYSNNA  259 (294)
T ss_dssp             TCCSSHHHHHTSSSSTTHHHHHHHHHCH
T ss_pred             ccccchhhHHHhcCchHHHHHHHHhhCH
Confidence            9999999999999999999999999885

>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Ascorbate peroxidase
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=100.00  E-value=1.8e-58  Score=439.74  Aligned_cols=225  Identities=24%  Similarity=0.307  Sum_probs=192.8

Q ss_pred             cCchHHHHHHHHHhhhhccCCccchhhhhhhhhcccc-----------cCCCceeeeccCCCCcccccccccCCCCcchh
Q 039585          110 TCPDFEKIVREFVHQKQTQSPSTAAGALRVFMHDCFV-----------DGCDGSVLISSNAFNVAERDSDINLSLPGDAF  178 (368)
Q Consensus       110 sCp~~e~iV~~~v~~~~~~~~~~a~~llRl~FHDc~v-----------~GcDgSill~~~~~~~~E~~~~~N~~l~~~~~  178 (368)
                      +|+...+.||+.|++++.. ..+++.+|||+||||+|           |||||||+|+      +|+++++|.+| .+++
T Consensus         3 ~~~~~~~~~r~~i~~~~~~-~~~~p~llRlafHd~~t~~~~~~~~~~~gG~dGsi~~~------~E~~~~~N~gL-~~~~   74 (275)
T d1iyna_           3 SDSAQLKSAREDIKELLKT-KFCHPIMVRLGWHDAGTYNKNIEEWPQRGGANGSLRFD------VELKHGANAGL-VNAL   74 (275)
T ss_dssp             CHHHHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHTTCCTTCCSTTTTCSSSSGGGSH------HHHTSGGGTTT-HHHH
T ss_pred             CCHHHHHHHHHHHHHHHhc-CCchHHHHHHHHhhhcCcCCCCCcCCCCCCCCcceeCc------hhccCcccccH-HHHH
Confidence            6788888999999887654 46799999999999986           6999999986      69999999999 6899


Q ss_pred             HHHHHHHHHHHhhCCCCCcHHHHHHhhhhhHHHhcCCCCcccccCCcCCccccccCCCCCCCC--CCCCHHHHHHHHHHC
Q 039585          179 DVVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIPGNLPT--NNMTMDEILKMFASK  256 (368)
Q Consensus       179 ~~i~~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~--p~~~~~~l~~~F~~~  256 (368)
                      ++|+.||++++     .|||||||+||||+||+++|||.|+|++||+|++++....+.+.||.  +..++++|++.|+++
T Consensus        75 ~~i~~ik~~~~-----~VScADiialAar~AV~~~GGp~~~v~~GR~D~~~s~~~~~~~~lP~~~p~~~~~~l~~~F~~~  149 (275)
T d1iyna_          75 NLLKPIKDKYS-----GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVTEPEQCPEEGRLPDAGPPSPAQHLRDVFYRM  149 (275)
T ss_dssp             HHHHHHHHHCT-----TSCHHHHHHHHHHHHHHHTTCCCCCCCBCBCCCCSGGGSCCSCCSCCSSCSSHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcc-----CCCHHHHHHHHHHHHHHhcCCceeeeccCCCCCcccccccccccccccCCCCcHHHHHHHHHHc
Confidence            99999999873     59999999999999999999999999999999999988888888996  678999999999999


Q ss_pred             CCChhhhhhhcccceeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCCCCccchhhhh
Q 039585          257 GFSIQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFR  336 (368)
Q Consensus       257 Gl~~~dlVaLsGaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~  336 (368)
                      ||+.+|||+|+||||||++||...        |.+..+..        +...|+...    ....+ ..||.+|||+||+
T Consensus       150 Gl~~~emVaL~GaHTiG~ahc~~~--------~~~~~~~~--------~~~~~~~~~----~~~~~-~~tp~~fDn~Yy~  208 (275)
T d1iyna_         150 GLNDKEIVALSGAHTLGRSRPDRS--------GWGKPETK--------YTKDGPGAP----GGQSW-TAQWLKFDNSYFK  208 (275)
T ss_dssp             TCCHHHHHHHHGGGGSCEECTTTT--------SCSCSCCT--------TTTTCSSSC----CSEES-STTTTSCSTHHHH
T ss_pred             CCCCcceEEEeccccccccccccc--------CCCCcccc--------cCcCCCCCC----CCCcC-cCCcccccccccc
Confidence            999999999999999999999432        22222221        234454321    11223 3689999999999


Q ss_pred             hcccccc----ccccchhcccCCChHHHHHHhhhCC
Q 039585          337 GLPRGLG----LLRVDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       337 ~ll~~~g----lL~SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                      ||++++|    +|+|||+|+.|++||.+|+.||.|+
T Consensus       209 ~l~~~~g~~~~~l~sD~~L~~d~~tr~~v~~yA~~~  244 (275)
T d1iyna_         209 DIKERRDEDLLVLPTDAALFEDPSFKVYAEKYAADP  244 (275)
T ss_dssp             HHHHCCCTTSCCCHHHHHHHHSTTHHHHHHHHHHCH
T ss_pred             eeeccccccceecHHHHHHhhCHHHHHHHHHHHhCH
Confidence            9999999    9999999999999999999999874

>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]}

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Fungal peroxidase (ligninase)
species: Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]

Probab=100.00  E-value=1.8e-57  Score=445.64  Aligned_cols=237  Identities=19%  Similarity=0.280  Sum_probs=189.2

Q ss_pred             cccCchHHHHHHHHHhhhhccC--Cccchhhhhhhhhcccc----------cCCCceeeeccCCCCcccccccccCCCCc
Q 039585          108 KTTCPDFEKIVREFVHQKQTQS--PSTAAGALRVFMHDCFV----------DGCDGSVLISSNAFNVAERDSDINLSLPG  175 (368)
Q Consensus       108 ~~sCp~~e~iV~~~v~~~~~~~--~~~a~~llRl~FHDc~v----------~GcDgSill~~~~~~~~E~~~~~N~~l~~  175 (368)
                      +..|...+.++ +.|++.+.++  ...|+++|||+||||||          |||||||||+.+    .|+++.+|+|| +
T Consensus        11 na~cc~~~~v~-~dlq~~~~~~~c~~~A~~~lRL~FHDcfv~~~~~g~~~~gGcDgSill~~~----~E~~~~~N~Gl-d   84 (357)
T d1yyda1          11 HAACCAFIPLA-QDLQETIFQNECGEDAHEVIRLTFHDAIAISRSQGPKAGGGADGSMLLFPT----VEPNFSANNGI-D   84 (357)
T ss_dssp             CGGGTTHHHHH-HHHHHHTTTTSSSHHHHHHHHHHHHHHHCCCTTTCGGGCCSSSCHHHHSTT----TGGGSGGGTTT-H
T ss_pred             CcccccHHHHH-HHHHHHHhcCCccHHHHHHHHHHHhcccccccccCcCCCCCCCeeeecCCc----cccCCcccCCH-H
Confidence            35677766655 5555555443  35788999999999999          599999999753    69999999998 3


Q ss_pred             chhHHHHHHHHHHHhhCCCCCcHHHHHHhhhhhHHHh-cCCCCcccccCCcCCccccccCCCCCCCCCCCCHHHHHHHHH
Q 039585          176 DAFDVVIKIKNALEDACPGVVSCADILTASTRNLVVM-AGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFA  254 (368)
Q Consensus       176 ~~~~~i~~iK~~le~~cp~~VScADilalAa~~av~~-~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~  254 (368)
                      +++++|+    .+++ |+++|||||||+||||+||+. .|||+|.|++||+|++.+.   .+++||.++.++++|++.|+
T Consensus        85 ~i~~~~~----~~~~-~~~~VScADiialAardAV~~~~GGP~~~v~~GR~Da~~a~---~~~~LP~p~~~~~~l~~~Fa  156 (357)
T d1yyda1          85 DSVNNLI----PFMQ-KHNTISAADLVQFAGAVALSNCPGAPRLEFLAGRPNKTIAA---VDGLIPEPQDSVTKILQRFE  156 (357)
T ss_dssp             HHHHHHH----HHHH-HSTTSCHHHHHHHHHHHHHHTSTTCCCCCCEECCCSCCCCC---CTTCSCCTTCCHHHHHHHHH
T ss_pred             HHHHHHH----HHHh-cCCCCCHHHHHHHHHHHHHHhccCCCceeecCCCCcccccc---cccCCCCccccHHHHHHHHh
Confidence            3444444    4433 567899999999999999975 5999999999999997764   45789999999999999997


Q ss_pred             H-CCCChhhhhhhcccceeccccccccccccccCCCCCCCCCCCCHHHHHHHh-hhcCCCCCCCcccccCCCCCCCccch
Q 039585          255 S-KGFSIQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALK-AACKNHEQNITMTAFNDVMSPGKFDN  332 (368)
Q Consensus       255 ~-~Gl~~~dlVaLsGaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~-~~Cp~~~~~~~~~~~lD~~tp~~FDN  332 (368)
                      + +||+.+|||+|+||||||++||..+..+.++|..+   ...+|..|...|. +.|++.+ .      .+..++..||+
T Consensus       157 ~~~Glt~~dmVaLsGAHTIG~ah~~~~~~~~~~~~~t---p~~fDn~~f~~ll~~~~~~~~-~------~~~~~~~~~d~  226 (357)
T d1yyda1         157 DAGGFTPFEVVSLLASHSVARADKVDQTIDAAPFDST---PFTFDTQVFLEVLLKGVGFPG-S------ANNTGEVASPL  226 (357)
T ss_dssp             HHHCCCHHHHHHHGGGGGGCEESSSSTTCSCEESSSC---TTSCSSHHHHHHTBCCCBCSS-C------SCCTTEECBSC
T ss_pred             hhhcCChHHhheeecccceecccccCCCccccccccc---cccchHHHHHHHHhhcCCCCC-C------CCCCccccCCC
Confidence            5 69999999999999999999998776655554432   2356777665555 5555433 1      12357889999


Q ss_pred             hhhhhccccccccccchhcccCCChHHHHHHhhhCC
Q 039585          333 SYFRGLPRGLGLLRVDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       333 ~Yy~~ll~~~glL~SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                      .||+++..++|+|+|||+|+.|++|+.+|++||+||
T Consensus       227 ~~~~~~~~g~~~L~SD~~L~~D~~T~~~V~~yA~n~  262 (357)
T d1yyda1         227 PLGSGSDTGEMRLQSDFALAHDPRTACIWQGFVNEQ  262 (357)
T ss_dssp             CCCBTTBCCCCEEHHHHHHHHSTTTHHHHHHTTTCH
T ss_pred             cccccccccccccHHHHHHhcCHHHHHHHHHHhhCH
Confidence            999999999999999999999999999999999885

>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]}

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Fungal peroxidase (ligninase)
species: Arthromyces ramosus [TaxId: 5451]

Probab=100.00  E-value=2.5e-57  Score=441.58  Aligned_cols=224  Identities=21%  Similarity=0.201  Sum_probs=188.6

Q ss_pred             HHHHHHHHHhhhhccCCc---cchhhhhhhhhcccc-------------cCCCceeeeccCCCCcccccccccCCCCcch
Q 039585          114 FEKIVREFVHQKQTQSPS---TAAGALRVFMHDCFV-------------DGCDGSVLISSNAFNVAERDSDINLSLPGDA  177 (368)
Q Consensus       114 ~e~iV~~~v~~~~~~~~~---~a~~llRl~FHDc~v-------------~GcDgSill~~~~~~~~E~~~~~N~~l~~~~  177 (368)
                      +|..|++.|++.+..+..   .|+++|||+||||||             +||||||||+.    ..|+++.+|.|| +++
T Consensus        17 ~~~~v~~~iq~~l~~~~~cg~~a~~~lRL~FHDcfv~~~~~~~~g~~~~gGcDgSill~~----~~E~~~~~N~gl-~~~   91 (336)
T d2e39a1          17 VWFDVLDDLQTNFYQGSKCESPVRKILRIVFHDAIGFSPALTAAGQFGGGGADGSIIAHS----NIELAFPANGGL-TDT   91 (336)
T ss_dssp             HHHHHHHHHHHTTTTTTCCSHHHHHHHHHHHHHHTCCCHHHHHTTSCCCCSSSSHHHHTH----HHHTTSGGGTTC-HHH
T ss_pred             hHHHHHHHHHHHHhccCCcchHHHHHHHHHHhccccccccccccCCCCCCCCCeecccCC----cccccCcCcCCH-HHH
Confidence            445599999998876544   677899999999998             79999999974    369999999999 456


Q ss_pred             hHHHHHHHHHHHhhCCCCCcHHHHHHhhhhhHHH-hcCCCCcccccCCcCCccccccCCCCCCCCCCCCHHHHHHHHHHC
Q 039585          178 FDVVIKIKNALEDACPGVVSCADILTASTRNLVV-MAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASK  256 (368)
Q Consensus       178 ~~~i~~iK~~le~~cp~~VScADilalAa~~av~-~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~  256 (368)
                      +++|+.+|++.      .|||||||+||||+||+ +.|||+|.|++||+|++.+.   .+++||.++.++++|+++|+++
T Consensus        92 ~~~~~~~~~~~------~VScADilalAar~Av~~~~GgP~~~v~~GR~D~~~~~---~~~~LP~p~~~v~~l~~~F~~k  162 (336)
T d2e39a1          92 IEALRAVGINH------GVSFGDLIQFATAVGMSNCPGSPRLEFLTGRSNSSQPS---PPSLIPGPGNTVTAILDRMGDA  162 (336)
T ss_dssp             HHHHHHHHHHH------TCCHHHHHHHHHHHHHHTSTTCCCCCCEECCCSCCCCC---CSSCSCCTTSCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhc------CCCHHHHHHHHHHHHhhhhCCCceecccCCCccccccc---cccccCCccchhHHHHHHHHhc
Confidence            66666666553      39999999999999987 57999999999999987764   4578999999999999999999


Q ss_pred             CCChhhhhhhcccceeccccccccccccccCCCCCCCCC-CCCHHHHHHHhhhcCCCCCCCcccccCCCCCCCccchhhh
Q 039585          257 GFSIQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDP-ELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYF  335 (368)
Q Consensus       257 Gl~~~dlVaLsGaHtiG~~hc~~f~~Rl~~~~g~~~~dp-~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy  335 (368)
                      ||+.+|||+|+||||||++||..+..+.+.++    .+| .+|..|...|..+|.             ..++..||+.||
T Consensus       163 Glt~~d~VaLsGAHTIG~ah~~~~~~~~~~~d----~tP~~fDn~yf~~ll~~~~-------------~~~~~~~d~~~~  225 (336)
T d2e39a1         163 GFSPDEVVDLLAAHSLASQEGLNSAIFRSPLD----STPQVFDTQFYIETLLKGT-------------TQPGPSLGFAEE  225 (336)
T ss_dssp             TCCHHHHHHHGGGGGSCEESSSCTTSTTEESS----SCTTSCSTHHHHHHTBCCC-------------BCCSSSCCTTEE
T ss_pred             CCCchhheeeeccccccccccCCcCccCCCcc----CCccccCHHHHHHHHhcCC-------------CCCCCCCCccee
Confidence            99999999999999999999976654444433    234 578887766665442             246788999999


Q ss_pred             hhccccccccccchhcccCCChHHHHHHhhhCC
Q 039585          336 RGLPRGLGLLRVDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       336 ~~ll~~~glL~SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                      ++++.|+|+|+|||+|++|++|+.+|++||+||
T Consensus       226 ~~~~~g~glL~SDq~L~~D~~T~~~V~~fA~n~  258 (336)
T d2e39a1         226 LSPFPGEFRMRSDALLARDSRTACRWQSMTSSN  258 (336)
T ss_dssp             CBSSTTCCEEHHHHHHHHSTTTHHHHHHTSSCH
T ss_pred             ecccCCCceeHHHHHHccCHHHHHHHHHHHhCH
Confidence            999999999999999999999999999999885

>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Ascorbate peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=1.9e-56  Score=420.03  Aligned_cols=213  Identities=31%  Similarity=0.432  Sum_probs=180.5

Q ss_pred             ccCchHHHHHHHHHhhh------hccCCccchhhhhhhhhcc--cccCCCceeeeccCCCCcccccccccCCCCcchhHH
Q 039585          109 TTCPDFEKIVREFVHQK------QTQSPSTAAGALRVFMHDC--FVDGCDGSVLISSNAFNVAERDSDINLSLPGDAFDV  180 (368)
Q Consensus       109 ~sCp~~e~iV~~~v~~~------~~~~~~~a~~llRl~FHDc--~v~GcDgSill~~~~~~~~E~~~~~N~~l~~~~~~~  180 (368)
                      ++||.++.++++.+.+.      +..+..+++++|||+||||  |+.|||++++. ++.....|+++.+|.||     +.
T Consensus         3 ks~p~~~~~~~~~~~~~~~~~~~~~~~~~~ap~llRl~FHDc~tf~~~~~~gg~~-gs~~~~~E~~~~~N~Gl-----~~   76 (250)
T d1oafa_           3 KSYPTVSADYQKAVEKAKKKLRGFIAEKRCAPLMLRLAWHSAGTFDKGTKTGGPF-GTIKHPAELAHSANNGL-----DI   76 (250)
T ss_dssp             CCCCCCCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCBTTTTBCSSS-SGGGSHHHHTSGGGTTH-----HH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHcccccccCCCCCCCCC-cccccccccccccccCH-----HH
Confidence            46666666666666655      3446789999999999999  88999998854 44344579999999765     88


Q ss_pred             HHHHHHHHHhhCCCCCcHHHHHHhhhhhHHHhcCCCCcccccCCcCCccccccCCCCCCCCCCCCHHHHHHHHH-HCCCC
Q 039585          181 VIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFA-SKGFS  259 (368)
Q Consensus       181 i~~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~-~~Gl~  259 (368)
                      |+.+|+.+|+.|| +|||||||+||||+||+++|||.|.|++||+|+..+.   +++.+|.++.+++++++.|. ++||+
T Consensus        77 i~~~~~~~~~~~p-~VS~ADiialAa~~Av~~~GGp~~~~~~GR~D~~~~~---~~g~~P~p~~~~~~l~~~F~~~~Gl~  152 (250)
T d1oafa_          77 AVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPP---PEGRLPDATKGSDHLRDVFGKAMGLT  152 (250)
T ss_dssp             HHHHHHHHHHTCT-TSCHHHHHHHHHHHHHHHTTCCCCCCCCCCCCCSSCC---CSCCSCCTTCCHHHHHHHHTTTTCCC
T ss_pred             HHHHHHHHHhccC-cccHHHHHHHHHHHHHHhcCCceeccCCCCccccCCC---CcccCCChHHHHHHHHHHHHHhcCCC
Confidence            9999999999999 8999999999999999999999999999999988775   45789999999999999996 58999


Q ss_pred             hhhhhhhcccceeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCCCCccchhhhhhcc
Q 039585          260 IQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYFRGLP  339 (368)
Q Consensus       260 ~~dlVaLsGaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~ll  339 (368)
                      .+|||||+||||||++||..     +++.|                               .++ .||++|||+||++|+
T Consensus       153 ~~e~VaL~GaHTiG~~h~~~-----s~~~~-------------------------------~~~-~tP~~fDN~Yf~~ll  195 (250)
T d1oafa_         153 DQDIVALSGGHTIGAAHKER-----SGFEG-------------------------------PWT-SNPLIFDNSYFTELL  195 (250)
T ss_dssp             HHHHHHHHGGGGSCEECTTT-----TSCCE-------------------------------ESS-SCTTCCSTHHHHHHH
T ss_pred             HHHHHHHhhhhhhhhhcccc-----ccccc-------------------------------ccc-cccchhhhHHHHHHH
Confidence            99999999999999999943     11111                               122 589999999999999


Q ss_pred             cc--ccc--cccchhcccCCChHHHHHHhhhCC
Q 039585          340 RG--LGL--LRVDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       340 ~~--~gl--L~SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                      .+  +|+  |+|||+|+.|++|+.+|++||.|+
T Consensus       196 ~~~~~gl~~l~SD~~L~~d~~t~~~v~~~A~d~  228 (250)
T d1oafa_         196 SGEKEGLLQLPSDKALLSDPVFRPLVDKYAADE  228 (250)
T ss_dssp             HCCCTTCCCCHHHHHHHHSTTHHHHHHHHHHCH
T ss_pred             hccccccccCHHHHHHhhCHHHHHHHHHHhcCH
Confidence            86  465  779999999999999999999884

>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]}

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Fungal peroxidase (ligninase)
species: White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]

Probab=100.00  E-value=6.6e-56  Score=432.39  Aligned_cols=223  Identities=17%  Similarity=0.206  Sum_probs=190.7

Q ss_pred             HHHHHHHHhhhhccCC---ccchhhhhhhhhcccc-------------cCCCceeeeccCCCCcccccccccCCCCcchh
Q 039585          115 EKIVREFVHQKQTQSP---STAAGALRVFMHDCFV-------------DGCDGSVLISSNAFNVAERDSDINLSLPGDAF  178 (368)
Q Consensus       115 e~iV~~~v~~~~~~~~---~~a~~llRl~FHDc~v-------------~GcDgSill~~~~~~~~E~~~~~N~~l~~~~~  178 (368)
                      +..|++.|++.+..+.   ..|+++|||+||||||             |||||||||+++    .|+++.+|.|| ++++
T Consensus        17 ~~~v~~~iq~~~~~~~~c~~~A~~~lRL~FHDcfv~s~~~~~~g~~~~gGcDgSiLl~~~----~E~~~~~N~gL-~~~~   91 (343)
T d1llpa_          17 WFDVLDDIQANMFHGGQCGAEAHESIRLVFHDSIAISPAMEAKGKFGGGGADGSIMIFDT----IETAFHPNIGL-DEVV   91 (343)
T ss_dssp             HHHHHHHHHHHTSTTTCCSHHHHHHHHHHHHHHTCCCHHHHHTTSCCCCSSSSHHHHTHH----HHTTSGGGTTH-HHHH
T ss_pred             HHHHHHHHHHHHhccCCcchHHHHHHHHHHhccccccccccccCCCCCCCCCeeeecCCC----cccCCCCCCCH-HHHH
Confidence            4558889988876654   5677899999999998             699999999643    69999999999 5788


Q ss_pred             HHHHHHHHHHHhhCCCCCcHHHHHHhhhhhHHH-hcCCCCcccccCCcCCccccccCCCCCCCCCCCCHHHHHHHHHHC-
Q 039585          179 DVVIKIKNALEDACPGVVSCADILTASTRNLVV-MAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASK-  256 (368)
Q Consensus       179 ~~i~~iK~~le~~cp~~VScADilalAa~~av~-~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~-  256 (368)
                      ++|+.+|++++      |||||||+||||+||+ +.|||+|.|++||+|++.+.   .++.||.++.++++|++.|+++ 
T Consensus        92 ~~l~~~~~~~~------VScADiialAar~Av~~~~GGP~~~v~~GR~Da~~~~---~~g~lP~P~~~v~~l~~~F~~kg  162 (343)
T d1llpa_          92 AMQKPFVQKHG------VTPGDFIAFAGAVALSNCPGAPQMNFFTGRKPATQPA---PDGLVPEPFHTVDQIIARVNDAG  162 (343)
T ss_dssp             HHHHHHHHHHT------CCHHHHHHHHHHHHHHTSTTCCCCCCEECCCCCSSCC---CSSCSCCTTSCHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhC------CCHHHHHHHHHHHHHHHhcCCCcccccCCCCcccccc---ccCCCCCccccHHHHHHHHHHhh
Confidence            99998888872      9999999999999997 57999999999999987764   4578999999999999999988 


Q ss_pred             CCChhhhhhhcccceeccccccccccccccCCCCCCCCCCCCHHHHHHHhh-hcCCCCCCCcccccCCCCCCCccchhhh
Q 039585          257 GFSIQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKA-ACKNHEQNITMTAFNDVMSPGKFDNSYF  335 (368)
Q Consensus       257 Gl~~~dlVaLsGaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~-~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy  335 (368)
                      ||+.+|||+|+||||||++||..+..|.++|..+   ...+|..|...|.. .|++              +...+|+.||
T Consensus       163 gl~~~dlVaLsGAHTIG~ah~~~~~~~~~~~d~t---P~~fDn~yf~~ll~~~~~~--------------~~~~~~~~~~  225 (343)
T d1llpa_         163 EFDELELVWMLSAHSVAAVNDVDPTVQGLPFDST---PGIFDSQFFVETQFRGTLF--------------PGSGGNQGEV  225 (343)
T ss_dssp             CCCHHHHHHHGGGGGGCEESSSSTTCSCEESSSC---TTSCSSHHHHHTTBCCCBC--------------SSCSCCTTEE
T ss_pred             CCCHHHHHHHHhhhhcccccccCcccccccccCc---cccchHHHHHHHHhccCCC--------------CCCCCccccc
Confidence            6999999999999999999998887777666542   12567777666654 4442              4456799999


Q ss_pred             hhccccccccccchhcccCCChHHHHHHhhhCC
Q 039585          336 RGLPRGLGLLRVDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       336 ~~ll~~~glL~SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                      .+++.++|+|+|||+|++|++|+.+|++||+||
T Consensus       226 ~~~~~g~~~L~SD~~L~~D~~T~~~V~~fA~n~  258 (343)
T d1llpa_         226 ESGMAGEIRIQTDHTLARDSRTACEWQSFVGNQ  258 (343)
T ss_dssp             CBSSTTCCEEHHHHHHTTSTTTHHHHHTTTTCH
T ss_pred             cccccCCcccHHHHHHhcCHHHHHHHHHHHhCH
Confidence            999999999999999999999999999999885

>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Cytochrome c peroxidase, CCP
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3.5e-52  Score=398.91  Aligned_cols=208  Identities=21%  Similarity=0.227  Sum_probs=175.9

Q ss_pred             Cccchhhhhhhhhcccc-------cCCCceeeeccCCCCcccccccccCCCCcchhHHHHHHHHHHHhhCCCCCcHHHHH
Q 039585          130 PSTAAGALRVFMHDCFV-------DGCDGSVLISSNAFNVAERDSDINLSLPGDAFDVVIKIKNALEDACPGVVSCADIL  202 (368)
Q Consensus       130 ~~~a~~llRl~FHDc~v-------~GcDgSill~~~~~~~~E~~~~~N~~l~~~~~~~i~~iK~~le~~cp~~VScADil  202 (368)
                      ..++++||||+||||++       |||||+.+..     ..|+++++|.+| .+++++|+.||+++     ++|||||||
T Consensus        37 ~~~~p~LvRlafHda~t~~~~~~~GG~ng~~ir~-----~~E~~~~~N~gL-~~~~~~le~ik~~~-----~~VScADii  105 (291)
T d2euta1          37 IGYGPVLVRLAWHISGTWDKHDNTGGSYGGTYRF-----KKEFNDPSNAGL-QNGFKFLEPIHKEF-----PWISSGDLF  105 (291)
T ss_dssp             TCSHHHHHHHHHHHHTTCBTTTTBSSSTTCGGGS-----HHHHTCGGGTTT-HHHHHHHHHHHHHC-----TTSCHHHHH
T ss_pred             cccHHHHHHHHHhhhccccCCCCCCCCCCCceeC-----cccccCccccch-HHHHHHHHHHHhhC-----CcccHHHHH
Confidence            47899999999999987       8999775532     369999999999 67999999999875     469999999


Q ss_pred             HhhhhhHHHhcCCCCcccccCCcCCccccccCCCCCCCCCCCCHHHHHHHHHHCCCChhhhhhhcccceecccccccccc
Q 039585          203 TASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIPGNLPTNNMTMDEILKMFASKGFSIQEYVALMGAHTIGFAHCKEFSD  282 (368)
Q Consensus       203 alAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsGaHtiG~~hc~~f~~  282 (368)
                      +||||+||+++|||.|+|++||+|+..+. .+.+++||.++.+++++++.|+++||+.+|||+|+||||||++||.++..
T Consensus       106 aLAar~AV~~~gGp~~~v~~GR~D~~~~~-~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~e~VaLsGaHTiG~ahc~~~~~  184 (291)
T d2euta1         106 SLGGVTAVQEMQGPKIPWRCGRVDTPEDT-TPDNGRLPDADKDAGYVRTFFQRLNMNDREVVALMGAHALGKTHLKNSGY  184 (291)
T ss_dssp             HHHHHHHHHHTTCCCCCBCCCCCCCCGGG-CCCSCCSCCSSCCHHHHHHHHHTTTCCHHHHHHHHGGGGSSCBCHHHHSC
T ss_pred             HHHHHHHHHhccCCcccccCCCCCCcccc-CcccCCCcCCccchhHHHHHHhhhcCCcHHHhhhhhhhccccccccCCCc
Confidence            99999999999999999999999996654 34567899999999999999999999999999999999999999987655


Q ss_pred             ccccCCCCCCCCCCCCHHHHHHHhhhc-CCCCCCCcccccCCCCCCCccchhhhhhccccccccccchhcccCCChHHHH
Q 039585          283 RLFKFAPNQPTDPELNPKYAEALKAAC-KNHEQNITMTAFNDVMSPGKFDNSYFRGLPRGLGLLRVDNMLVKDPRTKPLV  361 (368)
Q Consensus       283 Rl~~~~g~~~~dp~~~~~~~~~L~~~C-p~~~~~~~~~~~lD~~tp~~FDN~Yy~~ll~~~glL~SD~~L~~d~~t~~~V  361 (368)
                      |.++.    ..++.+|..|...|...+ .+.        .       ...|.||.+...++|||+|||+|++|++|+.+|
T Consensus       185 ~g~~~----~~~~~~dn~~f~~Ll~~~~~~~--------~-------~~~~~~~~~~~~~~~ll~SD~~L~~d~~tr~~V  245 (291)
T d2euta1         185 EGPGG----AANNVFTNEFYLNLLNEDWKLE--------K-------NDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIV  245 (291)
T ss_dssp             CBCSS----SCTTSCCSHHHHHHHHSCEEEE--------E-------CTTSCEEEEETTSCEECHHHHHHHHSHHHHHHH
T ss_pred             ccccc----cccCcccchhhhhhhccccccc--------C-------CCCCceeecCcCCCcccHHHHHHhhCHHHHHHH
Confidence            54321    235678888877776543 211        0       113668888899999999999999999999999


Q ss_pred             HHhhhCC
Q 039585          362 DQYASNE  368 (368)
Q Consensus       362 ~~yA~d~  368 (368)
                      +.||.||
T Consensus       246 ~~yA~d~  252 (291)
T d2euta1         246 KEYANDQ  252 (291)
T ss_dssp             HHHHHCH
T ss_pred             HHHhhCH
Confidence            9999885

>d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]}

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: Catalase-peroxidase KatG
domain: Catalase-peroxidase KatG
species: Burkholderia pseudomallei [TaxId: 28450]

Probab=100.00  E-value=7.1e-36  Score=286.47  Aligned_cols=205  Identities=16%  Similarity=0.100  Sum_probs=160.2

Q ss_pred             HHHHhhhhccCCccchhhhhhhhhcccc-------cCCCce-eeeccCCCCcccccccccCCCC-cchhHHHHHHHHHHH
Q 039585          119 REFVHQKQTQSPSTAAGALRVFMHDCFV-------DGCDGS-VLISSNAFNVAERDSDINLSLP-GDAFDVVIKIKNALE  189 (368)
Q Consensus       119 ~~~v~~~~~~~~~~a~~llRl~FHDc~v-------~GcDgS-ill~~~~~~~~E~~~~~N~~l~-~~~~~~i~~iK~~le  189 (368)
                      .+.|++.+.....+.+.||||+||||.+       |||+|+ |++.      .|++++.|++|. .+.+.+++.||+++.
T Consensus        23 ~~~lk~~i~~~g~~~~~lvRlAWH~AgTy~~~d~~GGanGa~iRf~------pe~~~~~N~~l~la~~~~~l~~Ik~~~~   96 (308)
T d1mwva2          23 AAELKAKVLASGLTVSQLVSTAWAAASTFRGSDKRGGANGARIRLA------PQKDWEANQPEQLAAVLETLEAIRTAFN   96 (308)
T ss_dssp             HHHHHHHHHHTTCCHHHHHHHHHHHHTTCBTTTTBCSSTBCGGGST------TGGGCGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCcHHHHHHHHHhhhccccCCCCCCCCchhhhcch------hhhccccCCchhHHHHHHHHHHHHHhcc
Confidence            4567777777777889999999999986       899999 5553      799999999751 245788999999875


Q ss_pred             h--hCCCCCcHHHHHHhhhhhHHHhcCCC-----CcccccCCcCCccccccC--------------CCCCCCCCCCCHHH
Q 039585          190 D--ACPGVVSCADILTASTRNLVVMAGGP-----RFNVSFGRKDGLVSQAAR--------------IPGNLPTNNMTMDE  248 (368)
Q Consensus       190 ~--~cp~~VScADilalAa~~av~~~GGP-----~~~v~~GR~D~~~s~~~~--------------~~~~lP~p~~~~~~  248 (368)
                      .  .....||+||||+||+.+|||.+|||     .+++..||.|........              .....|.+..+..+
T Consensus        97 ~~~~~~~~iS~ADL~~LAG~vAIE~aGgp~~~~~~i~f~~GR~D~~~~~~d~~~~~~~~~~a~~~~~~~~~~~~~~~~~~  176 (308)
T d1mwva2          97 GAQRGGKQVSLADLIVLAGCAGVEQAAKNAGHAVTVPFAPGRADASQEQTDVESMAVLEPVADGFRNYLKGKYRVPAEVL  176 (308)
T ss_dssp             HTCSTTCCCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCCBCCSTTCCHHHHGGGCCSEEGGGTEESSCCSSCHHHH
T ss_pred             ccccccccchHHHHHHHHHHHHHHhhhcccccceeeeeccCCCcccccccCcccccccccccccccccccCCcccchhHH
Confidence            3  22346999999999999999999988     888999999986543210              01234555567899


Q ss_pred             HHHHHHHCCCChhhhhhhcccceeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCCCC
Q 039585          249 ILKMFASKGFSIQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPG  328 (368)
Q Consensus       249 l~~~F~~~Gl~~~dlVaLsGaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~  328 (368)
                      |++.|.+||||++|||||+|||++|++|..    |  .+.|                    ++            +.+|+
T Consensus       177 lR~~F~rMGl~D~E~VAL~Gah~~gg~~~~----~--s~~G--------------------~w------------T~~p~  218 (308)
T d1mwva2         177 LVDKAQLLTLSAPEMTVLLGGLRVLGANVG----Q--SRHG--------------------VF------------TAREQ  218 (308)
T ss_dssp             HHHHHHHTTCCHHHHHHHHHHHHHHTCSGG----G--CCTT--------------------CC------------CSSTT
T ss_pred             HHHHHHHccCccccceeeecccccccceec----C--Cccc--------------------cC------------CCCCc
Confidence            999999999999999999999999998752    1  1111                    12            24799


Q ss_pred             ccchhhhhhccccc-----------------------ccc--ccchhcccCCChHHHHHHhhhC
Q 039585          329 KFDNSYFRGLPRGL-----------------------GLL--RVDNMLVKDPRTKPLVDQYASN  367 (368)
Q Consensus       329 ~FDN~Yy~~ll~~~-----------------------glL--~SD~~L~~d~~t~~~V~~yA~d  367 (368)
                      +|||+||++|+...                       .++  .+|++|..|+++|++|++||.|
T Consensus       219 ~f~N~yF~~Ll~~~w~w~~~~~~~~~~~~~d~~~~~~~~~~t~tDlaL~~Dp~fR~~~e~YA~D  282 (308)
T d1mwva2         219 ALTNDFFVNLLDMGTEWKPTAADADVFEGRDRATGELKWTGTRVDLVFGSHSQLRALAEVYGSA  282 (308)
T ss_dssp             SCCSHHHHHHTCTTEEEEECSSCTTEEEEEETTTCCEEEEEEHHHHGGGTSHHHHHHHHHHTST
T ss_pred             ccccchhhccccCCceeeeccCCCcccccccCCCCCccCcCChhcchhccCHHHHHHHHHHhhh
Confidence            99999999999521                       223  4699999999999999999964

>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: Catalase-peroxidase KatG
domain: Catalase-peroxidase KatG
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=100.00  E-value=6.2e-36  Score=294.44  Aligned_cols=236  Identities=22%  Similarity=0.267  Sum_probs=170.0

Q ss_pred             HHHHHHHhhhhccC--------Cccchhhhhhhhhcccc-------cCCCce-eeeccCCCCcccccccccCCCCcchhH
Q 039585          116 KIVREFVHQKQTQS--------PSTAAGALRVFMHDCFV-------DGCDGS-VLISSNAFNVAERDSDINLSLPGDAFD  179 (368)
Q Consensus       116 ~iV~~~v~~~~~~~--------~~~a~~llRl~FHDc~v-------~GcDgS-ill~~~~~~~~E~~~~~N~~l~~~~~~  179 (368)
                      ..|++.|.+++...        ...++.||||+||++.+       ||++|+ |+|.      +|++++.|.+| ++++.
T Consensus        45 ~~~~~di~~l~~~~~~~wpaD~g~~gP~lVRlAWHsAgTYR~sD~RGGanGariRfa------Pe~sW~~N~~L-dkAr~  117 (406)
T d1itka1          45 EAVKSDLEELMTSSQDWWPADYGHYGPLFIRMAWHSAGTYRTADGRGGAAGGRQRFA------PINSWPDNANL-DKARR  117 (406)
T ss_dssp             HHHHHHHHHHHTCCBTTBCCGGGCCHHHHHHHHHHHHTTCCTTTCCCSSTTCGGGST------TGGGCGGGTTH-HHHHH
T ss_pred             HHHHHHHHHHHhcccccCcccccccchhHhhhhhhhhcceeccCCCCCCCCceeCch------hhhccCCCccc-HHHHH
Confidence            46888888887664        47899999999999986       799987 6554      79999999999 78999


Q ss_pred             HHHHHHHHHHhhCCCCCcHHHHHHhhhhhHHHhcCCCCcccccCCcCCccccccCC---C------------C-------
Q 039585          180 VVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARI---P------------G-------  237 (368)
Q Consensus       180 ~i~~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~---~------------~-------  237 (368)
                      +++.||+++    +..||+||||+||+.+|||.+|||.|.+..||.|.........   .            +       
T Consensus       118 lLepIK~ky----g~~IS~ADLivLAG~vAiE~~ggp~i~f~~GR~Da~~~~~d~~~g~~~e~~~d~~~~~~~~l~~pl~  193 (406)
T d1itka1         118 LLLPIKQKY----GQKISWADLMILAGNVAIESMGFKTFGYAGGREDAFEEDKAVNWGPEDEFETQERFDEPGEIQEGLG  193 (406)
T ss_dssp             HTHHHHHHH----GGGSCHHHHHHHHHHHHHHHTTCCCSCCCBCCCCCSSCCTTCCCCSCSSTTCCCSCSSTTCCCTTCS
T ss_pred             HHHHHHHhc----CcccccchhheehhhhhhhhccCcccccccCCccccccccccccCccccccccccCCcccccccccc
Confidence            999999998    3359999999999999999999999999999999865532100   0            0       


Q ss_pred             ---------------CCCCCCCCHHHHHHHHHHCCCChhhhhhhc-ccceeccccccccccccccCCCCCCCCCCCCHHH
Q 039585          238 ---------------NLPTNNMTMDEILKMFASKGFSIQEYVALM-GAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKY  301 (368)
Q Consensus       238 ---------------~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLs-GaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~  301 (368)
                                     ..|++..+..+|++.|.+||||++|||||+ |+||+|++|..+-.....      +++|..-...
T Consensus       194 a~~~~liyv~Peg~~g~~d~~~~a~~lrd~f~rMgl~d~E~VALigG~htlG~~hg~~~~~~~~------g~~Pe~~~~~  267 (406)
T d1itka1         194 ASVMGLIYVNPEGPDGNPDPEASAKNIRQTFDRMAMNDKETAALIAGGHTFGKVHGADDPEENL------GPEPEAAPIE  267 (406)
T ss_dssp             CSSTTCSSSCTTCGGGCCCHHHHHHHHHHHHHTTTCCHHHHHHHHHHHTTSCEECBSSCHHHHB------CCCGGGSCGG
T ss_pred             cccccccccCCccccCCCCccchHHHHHHHHHHhcCChHHHHHHHhcccccccccCCCCccccC------CCCccccccc
Confidence                           012222346789999999999999999997 889999999643110000      1122111111


Q ss_pred             HHHHhhhcCC-CCC-CCcccccCC---CCCCCccchhhhhhcccc-----------------------------------
Q 039585          302 AEALKAACKN-HEQ-NITMTAFND---VMSPGKFDNSYFRGLPRG-----------------------------------  341 (368)
Q Consensus       302 ~~~L~~~Cp~-~~~-~~~~~~~lD---~~tp~~FDN~Yy~~ll~~-----------------------------------  341 (368)
                      ...|...+.. .+. .......++   +.+|++|||+||++|+..                                   
T Consensus       268 ~~g~g~~~~~~~g~g~~~~~sG~~G~wT~~p~~~~N~yF~~Ll~~~w~~~~s~~g~~~~~~~~~~~~~~~pda~~~~~~~  347 (406)
T d1itka1         268 QQGLGWQNKNGNSKGGEMITSGIEGPWTQSPTEWDMGYINNLLDYEWEPEKGPGGAWQWAPKSEELKNSVPDAHDPDEKQ  347 (406)
T ss_dssp             GTTCCCCBCC-------CBSSSCCEESSSSTTSCSSHHHHHHHHSCEEEEECTTSCEEEEESSSTTTTCEECSSCTTCEE
T ss_pred             ccCccccCCCCCCcCcccccCCccccccccccccccchhhccccccccceeccCCceEeccCCcccccCCCcccccCCcc
Confidence            1111111110 000 111122222   458999999999999852                                   


Q ss_pred             -ccccccchhcccCCChHHHHHHhhhCC
Q 039585          342 -LGLLRVDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       342 -~glL~SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                       -+||.+|++|..|+++|.++++||.|+
T Consensus       348 ~~~ml~tDlaL~~Dp~~R~iaE~YA~d~  375 (406)
T d1itka1         348 TPMMLTTDIALKRDPDYREVMETFQENP  375 (406)
T ss_dssp             CCCBCHHHHHHHHSHHHHHHHHHHHHCH
T ss_pred             CCccchhHHHhhhCHHHHHHHHHHhhCH
Confidence             257999999999999999999999884

>d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]}

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: Catalase-peroxidase KatG
domain: Catalase-peroxidase KatG
species: Burkholderia pseudomallei [TaxId: 28450]

Probab=100.00  E-value=1.6e-35  Score=282.90  Aligned_cols=197  Identities=20%  Similarity=0.161  Sum_probs=159.8

Q ss_pred             HHhhhhccCCccchhhhhhhhhcccc-------cCCCce-eeeccCCCCcccccccccCCCCcchhHHHHHHHHHHHhhC
Q 039585          121 FVHQKQTQSPSTAAGALRVFMHDCFV-------DGCDGS-VLISSNAFNVAERDSDINLSLPGDAFDVVIKIKNALEDAC  192 (368)
Q Consensus       121 ~v~~~~~~~~~~a~~llRl~FHDc~v-------~GcDgS-ill~~~~~~~~E~~~~~N~~l~~~~~~~i~~iK~~le~~c  192 (368)
                      .|+..+.......+.||||+||||++       ||++|+ |.+.      +|++++.|.+| +.++.+++.||++.    
T Consensus        18 ~lk~~i~~~g~~~~~lvRlAWHsAgTy~~~d~~GGanGa~iR~~------pe~~~~~N~~l-~~a~~~L~~ik~k~----   86 (292)
T d1u2ka_          18 DLKFAIADSGLSVSELVSVAWASASTFRGGDKRGGANGARLALM------PQRDWDVNAAA-VRALPVLEKIQKES----   86 (292)
T ss_dssp             HHHHHHHTSCCCHHHHHHHHHHHHTTCCTTCSSCSSTBCGGGST------TGGGCGGGTTH-HHHHHHHHHHHHHH----
T ss_pred             HHHHHHHhcCCcHHHHHHHHHhhhccccCCCCCCCCCCcccccc------ccccchhhhhh-hHHHHHHhhhhhhc----
Confidence            35566777788899999999999986       899998 6553      79999999999 57889999999886    


Q ss_pred             CCCCcHHHHHHhhhhhHHHhcCCCC-----cccccCCcCCccccccCCC--------------CCCCCCCCCHHHHHHHH
Q 039585          193 PGVVSCADILTASTRNLVVMAGGPR-----FNVSFGRKDGLVSQAARIP--------------GNLPTNNMTMDEILKMF  253 (368)
Q Consensus       193 p~~VScADilalAa~~av~~~GGP~-----~~v~~GR~D~~~s~~~~~~--------------~~lP~p~~~~~~l~~~F  253 (368)
                       +.||+||+|+||+.+|||.+|||.     +.+..||.|..........              ...+........+++.|
T Consensus        87 -~~iS~ADL~~LAG~vAIE~~ggp~g~~i~i~~~~GR~Da~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~f  165 (292)
T d1u2ka_          87 -GKASLADIIVLAGVVGVEKAASAAGLSIHVPFAPGRVDARQDQTDIEMFELLEPIADGFRNYRARLDVSTTESLLIDKA  165 (292)
T ss_dssp             -CSSCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCCBCCGGGSCHHHHHTTCCSEETTTTEECSCCSSCHHHHHHHHH
T ss_pred             -ccccHHHHHHHHHHHHHHhhccccCcccccccccCcccccccccCccccchhcccccccCCcccccCCCchHHHHHHHH
Confidence             358999999999999999999995     7899999998665321100              12334455678899999


Q ss_pred             HHCCCChhhhhhhcccceeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCCCCccchh
Q 039585          254 ASKGFSIQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNS  333 (368)
Q Consensus       254 ~~~Gl~~~dlVaLsGaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~  333 (368)
                      .++||+.+|||||+|||++|++|+...        +.                  .++            ..+|++|||+
T Consensus       166 ~rmGl~d~E~vaL~Gg~~~g~~~~~~s--------~~------------------g~w------------t~~p~~~~n~  207 (292)
T d1u2ka_         166 QQLTLTAPEMTALVGGMRVLGANFDGS--------KN------------------GVF------------TDRVGVLSND  207 (292)
T ss_dssp             HHTTCCHHHHHHHHHHHHHHTCCTTCC--------CT------------------TCC------------CSSTTSCCSH
T ss_pred             HHhcccchhhheeecccccccccccCC--------CC------------------ccC------------cCCCCccCcc
Confidence            999999999999999999999986321        10                  011            1478999999


Q ss_pred             hhhhcccc-------------------------ccccccchhcccCCChHHHHHHhhhC
Q 039585          334 YFRGLPRG-------------------------LGLLRVDNMLVKDPRTKPLVDQYASN  367 (368)
Q Consensus       334 Yy~~ll~~-------------------------~glL~SD~~L~~d~~t~~~V~~yA~d  367 (368)
                      ||++|+..                         ..+|.+|++|..|+++|++|++||+|
T Consensus       208 yf~~Ll~~~w~w~~~~~~~~~~~~~~~~~~~~~~~~l~tDlaL~~Dp~~r~~~e~YA~D  266 (292)
T d1u2ka_         208 FFVNLLDMRYEWKATDESKELFEGRDRETGEVKFTASRADLVFGSNSVLRAVAEVYASS  266 (292)
T ss_dssp             HHHHHHCTTEEEEESSTTCCEEEEEETTTCCEEEEEEHHHHHHHHSHHHHHHHHHHTSS
T ss_pred             hhcccccccceecccccccccccccccCCCCccCCCChhhhhhccCHHHHHHHHHHhcc
Confidence            99999973                         13578999999999999999999987

>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]}

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: Catalase-peroxidase KatG
domain: Catalase-peroxidase KatG
species: Burkholderia pseudomallei [TaxId: 28450]

Probab=100.00  E-value=2.2e-35  Score=289.58  Aligned_cols=235  Identities=21%  Similarity=0.210  Sum_probs=168.8

Q ss_pred             HHHHHHHhhhhccC--------Cccchhhhhhhhhcccc-------cCCCc-eeeeccCCCCcccccccccCCCCcchhH
Q 039585          116 KIVREFVHQKQTQS--------PSTAAGALRVFMHDCFV-------DGCDG-SVLISSNAFNVAERDSDINLSLPGDAFD  179 (368)
Q Consensus       116 ~iV~~~v~~~~~~~--------~~~a~~llRl~FHDc~v-------~GcDg-Sill~~~~~~~~E~~~~~N~~l~~~~~~  179 (368)
                      ..|++.|.+++...        ...++.||||+||++.+       ||++| +|+|.      +|++++.|.+| ++++.
T Consensus        44 ~alk~di~~l~~~s~d~wpaD~G~ygp~lVRlAWHsAgTYR~~D~RGGanGg~iRfa------Pe~sW~~N~~L-dkar~  116 (406)
T d1mwva1          44 AAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAWHSAGTYRTADGRGGAGEGQQRFA------PLNSWPDNANL-DKARR  116 (406)
T ss_dssp             HHHHHHHHHHHTCCBTTBCCGGGCCHHHHHHHHHHHHTTCCTTTCCCSSTTCGGGST------TGGGCGGGTTH-HHHHH
T ss_pred             HHHHHHHHHHHhcccccCccccccchhHHHHHHHHhhccccccCCCCCCCCceeCCc------hhhcCCCchhH-HHHHH
Confidence            36788888877654        47899999999999986       79997 57664      79999999999 78999


Q ss_pred             HHHHHHHHHHhhCCCCCcHHHHHHhhhhhHHHhcCCCCcccccCCcCCccccccCC-------------CCC--------
Q 039585          180 VVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARI-------------PGN--------  238 (368)
Q Consensus       180 ~i~~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~-------------~~~--------  238 (368)
                      +|+.||+++.    ..||+||||+||+.+|||.+|||.|.|.+||.|.........             ..+        
T Consensus       117 lLepIK~ky~----~~IS~ADLivLAG~vAiE~~Gg~~i~f~~GR~d~~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~  192 (406)
T d1mwva1         117 LLWPIKQKYG----RAISWADLLILTGNVALESMGFKTFGFAGGRADTWEPEDVYWGSEKIWLELSGGPNSRYSGDRQLE  192 (406)
T ss_dssp             HTHHHHHHHG----GGSCHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCSSCCCCCCCSCSSTTCCTTSTTCSEETTTEEC
T ss_pred             HHHHHHHHhC----CCccccceeeeecHHHHHHhcCCccCCCcCccccccccccccccccccccccccccccccCccccc
Confidence            9999999984    359999999999999999999999999999999765431100             000        


Q ss_pred             --------------------CCCCCCCHHHHHHHHHHCCCChhhhhhh-cccceeccccccccccccccCCCCCCCCCCC
Q 039585          239 --------------------LPTNNMTMDEILKMFASKGFSIQEYVAL-MGAHTIGFAHCKEFSDRLFKFAPNQPTDPEL  297 (368)
Q Consensus       239 --------------------lP~p~~~~~~l~~~F~~~Gl~~~dlVaL-sGaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~  297 (368)
                                          .|++..+..+|++.|.+||||++||||| +|+||+|++|...-..-+       +.+|.-
T Consensus       193 ~Plaa~~~gliyvnpeg~~g~pd~~~~a~~lrd~f~rMglnd~E~vALi~G~HtlG~~hg~~~~~~~-------g~~pe~  265 (406)
T d1mwva1         193 NPLAAVQMGLIYVNPEGPDGNPDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTHGAGPASNV-------GAEPEA  265 (406)
T ss_dssp             TTCCSSSTTCSSSCTTSGGGCCCHHHHHHHHHHHHHTTTCCHHHHHHHHHHHTTSCBCCBSSCGGGB-------CCCGGG
T ss_pred             CccccccccccccCCccccCCCCchhhHHHHHHHHHhhcCChHHHHHHHhhhhhhccccCCCchhcc-------CCcccc
Confidence                                0222234778999999999999999999 599999999953211000       011100


Q ss_pred             CHHHH--HHHhhhcCCCCCCCcccccCC---CCCCCccchhhhhhcccc-------------------------------
Q 039585          298 NPKYA--EALKAACKNHEQNITMTAFND---VMSPGKFDNSYFRGLPRG-------------------------------  341 (368)
Q Consensus       298 ~~~~~--~~L~~~Cp~~~~~~~~~~~lD---~~tp~~FDN~Yy~~ll~~-------------------------------  341 (368)
                      -+.-.  ..+++.|-.+...++....++   +.+|.+|||+||++|+..                               
T Consensus       266 ~~~~~~g~gw~~~~~~g~~~~~~~sg~eG~wT~~P~~~dN~yF~~Ll~~~we~~~s~~g~~q~~~~~~~~~~pda~~~s~  345 (406)
T d1mwva1         266 AGIEAQGLGWKSAYRTGKGADAITSGLEVTWTTTPTQWSHNFFENLFGYEWELTKSPAGAHQWVAKGADAVIPDAFDPSK  345 (406)
T ss_dssp             SCGGGTTCCCCBCSTTSSGGGCBSSSCCCBCCSCTTSCCSHHHHHHHHSCEEEEECTTCCEEEEETTCCSCEECSSCTTC
T ss_pred             CccccccccccccccccCCCccCCCCCccCcCCCCcceehHHHhhhhcCcceeeccccccceeeecCcccCCCcccCCCC
Confidence            00000  001122221110111122222   357999999999999752                               


Q ss_pred             ---ccccccchhcccCCChHHHHHHhhhCC
Q 039585          342 ---LGLLRVDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       342 ---~glL~SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                         -+||.+|++|..|+++|+++++||.|+
T Consensus       346 ~~~~~ml~tDlal~~Dp~~R~iaE~YA~d~  375 (406)
T d1mwva1         346 KHRPTMLTTDLSLRFDPAYEKISRRFHENP  375 (406)
T ss_dssp             EECCEECHHHHHHHHSHHHHHHHHHHHHCH
T ss_pred             CcCcccchhhhhhccCHHHHHHHHHHhhCH
Confidence               256899999999999999999999874

>d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]}

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: Catalase-peroxidase KatG
domain: Catalase-peroxidase KatG
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.5e-34  Score=274.57  Aligned_cols=227  Identities=16%  Similarity=0.146  Sum_probs=158.6

Q ss_pred             HHHhhhhccCCccchhhhhhhhhcccc-------cCCCce-eeeccCCCCcccccccccCCCCcchhHHHHHHHHHHHh-
Q 039585          120 EFVHQKQTQSPSTAAGALRVFMHDCFV-------DGCDGS-VLISSNAFNVAERDSDINLSLPGDAFDVVIKIKNALED-  190 (368)
Q Consensus       120 ~~v~~~~~~~~~~a~~llRl~FHDc~v-------~GcDgS-ill~~~~~~~~E~~~~~N~~l~~~~~~~i~~iK~~le~-  190 (368)
                      +.|++.+.......+.||||+||||.+       |||+|+ |++...   ..|.++.+|.+| ++++.+|+.||+++.. 
T Consensus        21 ~alk~~i~~~g~~~~~lVRlAWHsAgTY~~~d~~GG~ngg~iRf~p~---~~w~~~~~NagL-~~a~~~L~pik~k~p~~   96 (285)
T d2ccaa2          21 ASLKSQIRASGLTVSQLVSTAWAAASSFRGSDKRGGANGGRIRLQPQ---VGWEVNDPDGDL-RKVIRTLEEIQESFNSA   96 (285)
T ss_dssp             HHHHHHHHTTTCCHHHHHHHHHHHHTTCBTTTTBCSSTBCGGGSTTG---GGCSTTCTTTTH-HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCcHHHHHHHHHhhhccccCcCCCCCCCccccccccc---ccccccchhhhH-HHHHHHHHHHHhhhhcc
Confidence            466666776677889999999999986       788866 655421   124445668899 6899999999999853 


Q ss_pred             hC-CCCCcHHHHHHhhhhhHHHhcCCC-----CcccccCCcCCccccccC--------------CCCCCCCCCCCHHHHH
Q 039585          191 AC-PGVVSCADILTASTRNLVVMAGGP-----RFNVSFGRKDGLVSQAAR--------------IPGNLPTNNMTMDEIL  250 (368)
Q Consensus       191 ~c-p~~VScADilalAa~~av~~~GGP-----~~~v~~GR~D~~~s~~~~--------------~~~~lP~p~~~~~~l~  250 (368)
                      +| ...||+||||+||+.+|||.+|||     .++|..||.|........              .....|.+..+..+|+
T Consensus        97 ~~~~~~IS~ADL~~LAG~vAIE~~ggp~~~~~~~~f~~gr~Da~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~a~~lr  176 (285)
T d2ccaa2          97 APGNIKVSFADLVVLGGCAAIEKAAKAAGHNITVPFTPGRTDASQEQTDVESFAVLEPKADGFRNYLGKGNPLPAEYMLL  176 (285)
T ss_dssp             CCTTBCCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCCBCCGGGSCHHHHGGGCCSEEGGGTEECSCCSSCHHHHHH
T ss_pred             ccCCccccHHHHHHHHHHHHHHHHhhccccccccCCCCCCCCccccccCccccchhhhhhhcccccccccCCcchHHHHH
Confidence            22 346999999999999999999999     678889999986543221              1124566777899999


Q ss_pred             HHHHHCCCChhhhhhhcccceeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCCCCcc
Q 039585          251 KMFASKGFSIQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKF  330 (368)
Q Consensus       251 ~~F~~~Gl~~~dlVaLsGaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~F  330 (368)
                      +.|.+||||++|||||+|||++|++|-..     .++.........++..|...|...-=             ...+..+
T Consensus       177 d~f~rMGl~d~E~VAL~Ggh~~g~~~~~~-----sg~g~~t~~~~~~~n~~f~~ll~~~~-------------~w~~~~~  238 (285)
T d2ccaa2         177 DKANLLTLSAPEMTVLVGGLRVLGANYKR-----LPLGVFTEASESLTNDFFVNLLDMGI-------------TWEPSPA  238 (285)
T ss_dssp             HHHHHTTCCHHHHHHHHHHHHHTTCSGGG-----CCTTCCCSSTTSCCSHHHHHHTCTTC-------------EEEECSS
T ss_pred             HHHHHcccchhhhheeecccchhhccccc-----ccccccCccccccccchhccccccCC-------------eEeeccC
Confidence            99999999999999999999999998421     12222111223344444333321100             0123345


Q ss_pred             chhhhhhcc-cc-cccc--ccchhcccCCChHHHHHHhhhCC
Q 039585          331 DNSYFRGLP-RG-LGLL--RVDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       331 DN~Yy~~ll-~~-~glL--~SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                      ++.||+..- .+ .+++  .+|++|..|+++|++|+.||+|+
T Consensus       239 ~~~~~e~~d~s~~~~~~~t~~Dl~l~~D~~fR~~ve~YA~Dd  280 (285)
T d2ccaa2         239 DDGTYQGKDGSGKVKWTGSRVDLVFGSNSELRALVEVYGADD  280 (285)
T ss_dssp             CSSEEEEECTTSCEEEEEEHHHHHHHHSHHHHHHHHHHTSTT
T ss_pred             CCceeEeecCCCCeeccCCHHHhhhccCHHHHHHHHHHhccc
Confidence            555554321 11 2334  56999999999999999999883

>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]}

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: Catalase-peroxidase KatG
domain: Catalase-peroxidase KatG
species: Synechococcus sp. pcc 7942 [TaxId: 1140]

Probab=100.00  E-value=5e-34  Score=272.65  Aligned_cols=194  Identities=16%  Similarity=0.143  Sum_probs=142.5

Q ss_pred             hhhccCCccchhhhhhhhhcccc-------cCCC-ceeeeccCCCCcccccccccCCCCcchhH-HHHHHHHHHHhhCCC
Q 039585          124 QKQTQSPSTAAGALRVFMHDCFV-------DGCD-GSVLISSNAFNVAERDSDINLSLPGDAFD-VVIKIKNALEDACPG  194 (368)
Q Consensus       124 ~~~~~~~~~a~~llRl~FHDc~v-------~GcD-gSill~~~~~~~~E~~~~~N~~l~~~~~~-~i~~iK~~le~~cp~  194 (368)
                      +.+......++.||||+||||.+       |||+ |+|++.      .|++++.|.++...... +.+.||+.     + 
T Consensus        24 ~~i~~~~~~~~~lvRlAWHsAGTY~~~d~~GG~ngg~iRf~------pe~~~~~N~~l~la~~~~l~~~~k~~-----~-   91 (294)
T d1ub2a2          24 DRIAASGLSISELVSTAWDSARTYRNSDKRGGANGARIRLA------PQKDWEGNEPDRLPKVLAVLEGISAA-----T-   91 (294)
T ss_dssp             HHHHHSCCCHHHHHHHHHHHHTTCBTTTTBCSSTBTGGGST------TGGGCGGGCTTHHHHHHHHHHHHHHH-----S-
T ss_pred             HHHHHcCCcHHHHHHHHHhccccccCcCCCCCcchhhhcCc------ccccccccccchhhhheeeccccccC-----C-
Confidence            33345567899999999999986       8999 667764      79999999987101122 23333322     3 


Q ss_pred             CCcHHHHHHhhhhhHHHhc---CCCCccccc--CCcCCccccccC--------------CCCCCCCCCCCHHHHHHHHHH
Q 039585          195 VVSCADILTASTRNLVVMA---GGPRFNVSF--GRKDGLVSQAAR--------------IPGNLPTNNMTMDEILKMFAS  255 (368)
Q Consensus       195 ~VScADilalAa~~av~~~---GGP~~~v~~--GR~D~~~s~~~~--------------~~~~lP~p~~~~~~l~~~F~~  255 (368)
                      .||+||+|+||+.+|||.+   |||.|.+.+  ||.|........              ..+..+........+++.|.+
T Consensus        92 ~iS~ADL~~LAG~vAiE~~g~~gGp~I~~~~~~gr~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~lr~~f~r  171 (294)
T d1ub2a2          92 GATVADVIVLAGNVGVEQKARAAGVEIVLPFAPGRGDATAEQTDTESFAVLEPIHDAIATGSSRTMRQRLKNCCLIATQL  171 (294)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCCBCCSTTCCTTTTGGGCCSEEGGGTEESSCCSSCHHHHHHHHHHH
T ss_pred             CcchhHHHHHHHHHHHhhhhhccCCceeecccCCCCccccccccccccccccccccccCccccCCcccchhhhhhHHHHh
Confidence            4999999999999999988   899988765  555544322110              011233334456789999999


Q ss_pred             CCCChhhhhhhcccceeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCCCCccchhhh
Q 039585          256 KGFSIQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMSPGKFDNSYF  335 (368)
Q Consensus       256 ~Gl~~~dlVaLsGaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy  335 (368)
                      ||||++|||||+|||++|++||...     ++                     +++            ..+|++|||+||
T Consensus       172 MGlnD~E~VAL~Gah~~gg~~~~~s-----~~---------------------g~w------------t~~p~~~~n~yf  213 (294)
T d1ub2a2         172 LGLTAPEMTVLIGGLRVLGTNHGGT-----KH---------------------VVF------------TDREGVLTNDFF  213 (294)
T ss_dssp             HTCCHHHHHHHHHHHHHTTCCGGGC-----CT---------------------TCC------------CSCTTSCCSHHH
T ss_pred             cCCchhhhhhhhccccccccccCCc-----cc---------------------ccc------------cCCcccccCccc
Confidence            9999999999999999999997421     11                     111            136889999999


Q ss_pred             hhcccc-----------------------ccccccchhcccCCChHHHHHHhhhC
Q 039585          336 RGLPRG-----------------------LGLLRVDNMLVKDPRTKPLVDQYASN  367 (368)
Q Consensus       336 ~~ll~~-----------------------~glL~SD~~L~~d~~t~~~V~~yA~d  367 (368)
                      ++|+..                       ..+|.||++|..|+++|++|++||+|
T Consensus       214 ~~Ll~~~w~w~~~~~~~~~~~~~~~~~~~~~~l~tDlaL~~Dp~fr~~~e~YA~D  268 (294)
T d1ub2a2         214 VNLTDMNYLWKPAGKNLYEICDRKTNQVKWTATRVDLVFGSNSILRAYSELYAQD  268 (294)
T ss_dssp             HHHTCTTEEEEECSTTCEEEEETTTCCEEEEECHHHHGGGTSHHHHHHHHHHTST
T ss_pred             cccccCcceeccCCCccccccccCCCCcccccchhhhhhccCHHHHHHHHHHhcc
Confidence            999862                       14578999999999999999999986

>d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: Catalase-peroxidase KatG
domain: Catalase-peroxidase KatG
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=100.00  E-value=9.9e-35  Score=278.82  Aligned_cols=203  Identities=15%  Similarity=0.172  Sum_probs=159.6

Q ss_pred             HHHHhhhhccCCccchhhhhhhhhcccc-------cCCCce-eeeccCCCCcccccccccC--CCCcchhHHHHHHHHHH
Q 039585          119 REFVHQKQTQSPSTAAGALRVFMHDCFV-------DGCDGS-VLISSNAFNVAERDSDINL--SLPGDAFDVVIKIKNAL  188 (368)
Q Consensus       119 ~~~v~~~~~~~~~~a~~llRl~FHDc~v-------~GcDgS-ill~~~~~~~~E~~~~~N~--~l~~~~~~~i~~iK~~l  188 (368)
                      .+.|++.+......++.||||+||||.+       |||+|+ |++      ..|++++.|.  +| .+++.+++.||+++
T Consensus        23 i~~lk~~i~~~g~~~p~lvRLAWHsAgTY~~~d~rGGaNGa~iRf------~pe~~w~~N~~~~l-~~a~~~L~~ik~~~   95 (308)
T d1itka2          23 IAELKEEILDSDLSVSQLVKTAWASASTYRDSDKRGGANGARLRL------EPQKNWEVNEPEQL-ETVLGTLENIQTEF   95 (308)
T ss_dssp             HHHHHHHHHHSSCCHHHHHHHHHHHHTTCBTTTTBCCSTBCGGGS------TTGGGCGGGCHHHH-HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCcHHHHHHHHHhhhccccCCCCCCCCCcccccc------ccccccccCchHHH-HHHHHHHHHHHHHh
Confidence            3567777777778899999999999986       899998 555      3799999884  56 46788999999999


Q ss_pred             Hhh---CCCCCcHHHHHHhhhhhHHHhcCCC-----CcccccCCcCCccccccCCC--------------CCCCCCCCCH
Q 039585          189 EDA---CPGVVSCADILTASTRNLVVMAGGP-----RFNVSFGRKDGLVSQAARIP--------------GNLPTNNMTM  246 (368)
Q Consensus       189 e~~---cp~~VScADilalAa~~av~~~GGP-----~~~v~~GR~D~~~s~~~~~~--------------~~lP~p~~~~  246 (368)
                      +..   ++ .||+||+|+||+.+|||.+|||     .+.+..||.|+.........              ...+......
T Consensus        96 ~~~k~~~~-~IS~ADL~~LAG~vAIE~aGgp~~~~~~i~~~~GR~Da~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  174 (308)
T d1itka2          96 NDSRSDGT-QVSLADLIVLGGNAAVEQAAANAGYDVEIPFEPGRVDAGPEHTDAPSFDALKPKVDGVRNYIQDDITRPAE  174 (308)
T ss_dssp             HHHCCSSB-CCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCCBCCGGGCCHHHHGGGCCSEETTTTEECTTCSSCHH
T ss_pred             hhhhcCCC-cccHHHHHHHHHHHHHhhhccCcCCCceeeecCCccccccccccCCCccccccccccccccccCCccccHH
Confidence            763   44 4999999999999999999999     78999999998654321110              0122223345


Q ss_pred             HHHHHHHHHCCCChhhhhhhcccceeccccccccccccccCCCCCCCCCCCCHHHHHHHhhhcCCCCCCCcccccCCCCC
Q 039585          247 DEILKMFASKGFSIQEYVALMGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYAEALKAACKNHEQNITMTAFNDVMS  326 (368)
Q Consensus       247 ~~l~~~F~~~Gl~~~dlVaLsGaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~lD~~t  326 (368)
                      ..+++.|.+||||++|||||+|||++|.+||...     ++                     +++            +.+
T Consensus       175 ~~lr~~f~rmgl~d~E~VAL~Gg~~~~g~~~~~~-----~~---------------------g~w------------t~~  216 (308)
T d1itka2         175 EVLVDNADLLNLTASELTALIGGMRSIGANYQDT-----DL---------------------GVF------------TDE  216 (308)
T ss_dssp             HHHHHHHHHTTCCHHHHHHHHHHHHHHCCCGGGC-----CT---------------------TCC------------CSS
T ss_pred             HHHHHHHHHhcCcHHHHHHHhccccccccCCCcc-----cc---------------------ccC------------CCC
Confidence            6789999999999999999999999999887431     11                     111            147


Q ss_pred             CCccchhhhhhcccc-------------------------ccccccchhcccCCChHHHHHHhhhC
Q 039585          327 PGKFDNSYFRGLPRG-------------------------LGLLRVDNMLVKDPRTKPLVDQYASN  367 (368)
Q Consensus       327 p~~FDN~Yy~~ll~~-------------------------~glL~SD~~L~~d~~t~~~V~~yA~d  367 (368)
                      |++|||.||++|+..                         ..++.||++|..|+++|++|++||.|
T Consensus       217 p~~~~n~yf~~Ll~~~~~W~~~~~~~~~~~~~d~~t~~~~~~~~~tDlaL~~D~~fr~~~e~YA~D  282 (308)
T d1itka2         217 PETLTNDFFVNLLDMGTEWEPAADSEHRYKGLDRDTGEVKWEATRIDLIFGSNDRLRAISEVYGSA  282 (308)
T ss_dssp             TTCCSSHHHHHHHCTTEEEEECTTCSSEEEEEETTTCCEEEEEEHHHHGGGTSHHHHHHHHHHTST
T ss_pred             cccccCccccccccCCceeccCcccccccccccCCCCCcccCCCHHhHHhccCHHHHHHHHHHccc
Confidence            899999999999863                         13468999999999999999999964

>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]}

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: Catalase-peroxidase KatG
domain: Catalase-peroxidase KatG
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.98  E-value=8e-34  Score=278.01  Aligned_cols=235  Identities=20%  Similarity=0.219  Sum_probs=169.5

Q ss_pred             HHHHHHHhhhhccC--------Cccchhhhhhhhhcccc-------cCCCcee-eeccCCCCcccccccccCCCCcchhH
Q 039585          116 KIVREFVHQKQTQS--------PSTAAGALRVFMHDCFV-------DGCDGSV-LISSNAFNVAERDSDINLSLPGDAFD  179 (368)
Q Consensus       116 ~iV~~~v~~~~~~~--------~~~a~~llRl~FHDc~v-------~GcDgSi-ll~~~~~~~~E~~~~~N~~l~~~~~~  179 (368)
                      ..|+++|++++...        ...++.||||+||++.+       ||++|+. +|      .+|++++.|.+| +.+..
T Consensus        49 ~a~~~d~~~l~~~s~~wwpaD~G~ygP~lVRlAWHsAGTYR~~DgRGGanGg~iRf------aPe~sWp~N~~L-dkAr~  121 (410)
T d2ccaa1          49 DALTRDIEEVMTTSQPWWPADYGHYGPLFIRMAWHAAGTYRIHDGRGGAGGGMQRF------APLNSWPDNASL-DKARR  121 (410)
T ss_dssp             HHHHHHHHHHHTSCCTTSCCGGGCCHHHHHHHHHHHHTTCCTTTCCCSSTTCGGGS------TTGGGCGGGTTH-HHHHH
T ss_pred             HHHHHHHHHHHhcccccCcccccccccchhhhhhhhhceeecccCCCCCCCCeecc------chhccccccchH-HHHHH
Confidence            46888998888764        36899999999999986       7999884 44      479999999999 67889


Q ss_pred             HHHHHHHHHHhhCCCCCcHHHHHHhhhhhHHHhcCCCCcccccCCcCCcccccc-------------------------C
Q 039585          180 VVIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAA-------------------------R  234 (368)
Q Consensus       180 ~i~~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~-------------------------~  234 (368)
                      +++.||+++.    ..||+||+|+||+.+||+.+|||.+.+..||.|.......                         .
T Consensus       122 LL~piK~ky~----~~iS~ADLi~LAG~vAiE~mGg~~i~f~~GR~D~~~~~~~~~g~~~~~~~~~R~~~~~el~d~l~~  197 (410)
T d2ccaa1         122 LLWPVKKKYG----KKLSWADLIVFAGNCALESMGFKTFGFGFGRVDQWEPDEVYWGKEATWLGDERYSGKRDLENPLAA  197 (410)
T ss_dssp             TTHHHHHHHG----GGSCHHHHHHHHHHHHHHHTTCCCSCCCBCCCCCSSCCCCCCCSCSSTTCCCCEETTTEECTTCCS
T ss_pred             HHHHHHHhcc----ccccCccceeeccceecceecccccccccccccccccccccCCCcccCCCCCCcCccccccCcccc
Confidence            9999999883    3699999999999999999999999999999997544210                         0


Q ss_pred             CC-----------CCCCCCCCCHHHHHHHHHHCCCChhhhhhh-cccceeccccccccccccccCCCCCCCCCCCCHHHH
Q 039585          235 IP-----------GNLPTNNMTMDEILKMFASKGFSIQEYVAL-MGAHTIGFAHCKEFSDRLFKFAPNQPTDPELNPKYA  302 (368)
Q Consensus       235 ~~-----------~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaL-sGaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~~~~~~  302 (368)
                      ..           ...|++.....+|++.|.+||||++||||| +|+||+|++|...-..-+ +      ..|.-.+.-.
T Consensus       198 ~~m~li~~np~g~~g~pd~~~~a~~lRd~f~rMglnD~E~VALiaGgHtlGk~Hg~~~~~~~-g------~~p~~a~~~~  270 (410)
T d2ccaa1         198 VQMGLIYVNPEGPNGNPDPMAAAVDIRETFRRMAMNDVETAALIVGGHTFGKTHGAGPADLV-G------PEPEAAPLEQ  270 (410)
T ss_dssp             SSTTCSSSCTTSGGGCCCHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSCCCCBSSCGGGB-C------CCGGGSCGGG
T ss_pred             cccCCcCCCCccccCCCCchhHHHHHHHHHHHccCCcHhhhhhhccceecccccCCCCcccc-C------CCcccCCccc
Confidence            00           012233344778999999999999999998 599999999964321111 0      0111000000


Q ss_pred             HHHh--hhcCCCCCCCcccccCC---CCCCCccchhhhhhcccc-----------------------------------c
Q 039585          303 EALK--AACKNHEQNITMTAFND---VMSPGKFDNSYFRGLPRG-----------------------------------L  342 (368)
Q Consensus       303 ~~L~--~~Cp~~~~~~~~~~~lD---~~tp~~FDN~Yy~~ll~~-----------------------------------~  342 (368)
                      +.|-  +.|-.+......+..++   +.+|++|||+||++|+..                                   -
T Consensus       271 ~G~g~~~~~~~~~~~~~~~sG~eg~WT~~P~~~dN~yF~~Ll~~~we~~ksp~g~~qw~~~d~~~~~~~pda~~~~~~~~  350 (410)
T d2ccaa1         271 MGLGWKSSYGTGTGKDAITSGIEVVWTNTPTKWDNSFLEILYGYEWELTKSPAGAWQYTAKDGAGAGTIPDPFGGPGRSP  350 (410)
T ss_dssp             TTCCCCBCSTTSSGGGCBSSSCCCCCCSCTTSCSSHHHHHHHHSCEEEEECTTSCEEEEEGGGTTTTCBCCTTSCCCBCC
T ss_pred             cCCcccCCCCCCCCcccccCCccccCccCcchhhhHHHhhhccccceecccccccceecccCCCCCCCCCCCcCCccCCC
Confidence            0000  00100000122233444   347899999999999841                                   2


Q ss_pred             cccccchhcccCCChHHHHHHhhhCC
Q 039585          343 GLLRVDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       343 glL~SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                      .||.+|++|..|+++|+++++||.|+
T Consensus       351 ~ml~tDlaL~~Dp~~r~iae~ya~d~  376 (410)
T d2ccaa1         351 TMLATDLSLRVDPIYERITRRWLEHP  376 (410)
T ss_dssp             EECHHHHHHHHSHHHHHHHHHHHHCH
T ss_pred             ccchhhHHhhhCHHHHHHHHHHHhCH
Confidence            57899999999999999999999874

>d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]}

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: Catalase-peroxidase KatG
domain: Catalase-peroxidase KatG
species: Synechococcus sp. pcc 7942 [TaxId: 1140]

Probab=99.97  E-value=4.7e-33  Score=273.54  Aligned_cols=234  Identities=20%  Similarity=0.218  Sum_probs=168.6

Q ss_pred             HHHHHHhhhhccC--------Cccchhhhhhhhhcccc-------cCCCce-eeeccCCCCcccccccccCCCCcchhHH
Q 039585          117 IVREFVHQKQTQS--------PSTAAGALRVFMHDCFV-------DGCDGS-VLISSNAFNVAERDSDINLSLPGDAFDV  180 (368)
Q Consensus       117 iV~~~v~~~~~~~--------~~~a~~llRl~FHDc~v-------~GcDgS-ill~~~~~~~~E~~~~~N~~l~~~~~~~  180 (368)
                      .|++.|++++...        ...++.||||+||++.+       ||++|. |+|.      +|++++.|.+| +++..+
T Consensus        41 a~k~Dl~~l~~~s~~~wpaD~G~ygP~lVRlAWhsAgTYR~sD~RGGanGgriRfa------P~~sW~~N~~L-dkAr~l  113 (406)
T d1ub2a1          41 ALKQDLQALMTDSQDWWPADWGHYGGLMIRLTWHAAGTYRIADGRGGAGTGNQRFA------PLNSWPDNTNL-DKARRL  113 (406)
T ss_dssp             TTHHHHHHHTTCCCTTSCCGGGCCHHHHHHHHHHHHTTCCTTTCCCSSTTCGGGST------TGGGCGGGTTH-HHHHHH
T ss_pred             HHHHHHHHHHhcccccCccccCcchhHHHhhhhhhccccccCCCCCCCCCCcccCc------hhhccccchHH-HHHHHH
Confidence            4788888888766        57899999999999986       788885 5554      79999999999 789999


Q ss_pred             HHHHHHHHHhhCCCCCcHHHHHHhhhhhHHHhcCCCCcccccCCcCCccccccCCC------------------------
Q 039585          181 VIKIKNALEDACPGVVSCADILTASTRNLVVMAGGPRFNVSFGRKDGLVSQAARIP------------------------  236 (368)
Q Consensus       181 i~~iK~~le~~cp~~VScADilalAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~------------------------  236 (368)
                      ++.||+++.    ..||+||||+||+.+|||.+||+.+.+..||.|..........                        
T Consensus       114 L~pIK~ky~----~~IS~ADLivLAG~vAiE~agg~ti~f~~GR~Da~~~~~dv~~g~~~e~l~~~~~~~~~~~~~~~l~  189 (406)
T d1ub2a1         114 LWPIKQKYG----NKLSWADLIAYAGTIAYESMGLKTFGFAFGREDIWHPEKDIYWGPEKEWFPPSTNPNSRYTGDRELE  189 (406)
T ss_dssp             THHHHHHHG----GGSCHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCSSCCTTCCCCSCSSSSCCSSSTTCSEETTTEEC
T ss_pred             HHHHHhhcC----CccchhhHHHhhhHHHHHHhcCCccccCCCcccccCCccccccccccccCCCCcCcccccCCccccc
Confidence            999999984    3599999999999999999999999999999997664321100                        


Q ss_pred             ------------------CCCCCCCCCHHHHHHHHHHCCCChhhhhhhc-ccceeccccccccccccccCCCCCCCCCCC
Q 039585          237 ------------------GNLPTNNMTMDEILKMFASKGFSIQEYVALM-GAHTIGFAHCKEFSDRLFKFAPNQPTDPEL  297 (368)
Q Consensus       237 ------------------~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLs-GaHtiG~~hc~~f~~Rl~~~~g~~~~dp~~  297 (368)
                                        ...|++..+..+|+..|.+|||+.+|||||+ |+||+|++|...-..   ++.+    .|.=
T Consensus       190 ~pl~a~~~~liyvnP~g~~g~pd~~~~a~~ir~~f~rM~mnd~E~vAL~aG~ht~Gk~hg~~~~~---~~g~----~p~g  262 (406)
T d1ub2a1         190 NPLAAVTMGLIYVNPEGVDGNPDPLKTAHDVRVTFARMAMNDEETVALTAGGHTVGKCHGNGNAA---LLGP----EPEG  262 (406)
T ss_dssp             TTCCSSSTTCSSCCTTSBTTBCCHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSCCBCBCSCST---TBCC----CGGG
T ss_pred             ccccccccCccccCCccccCCCChhhhHHHhhhhHHHhcCCHHHHhhhhhhhhhhccccCCCccc---ccCc----cccc
Confidence                              0113333446889999999999999999999 799999999543211   1111    0000


Q ss_pred             CHHHHHHH--hhhcCCCCCCCcccccCC---CCCCCccchhhhhhcc-c-------------------------------
Q 039585          298 NPKYAEAL--KAACKNHEQNITMTAFND---VMSPGKFDNSYFRGLP-R-------------------------------  340 (368)
Q Consensus       298 ~~~~~~~L--~~~Cp~~~~~~~~~~~lD---~~tp~~FDN~Yy~~ll-~-------------------------------  340 (368)
                      -..-...+  ++.|-.+...++....++   +.+|++|||+||.+|+ .                               
T Consensus       263 ~~~e~~g~~~~n~~~~g~g~~t~tSg~eg~wt~~p~~~dn~yF~~ll~~~~W~~~ks~~ga~q~~~~~~~~~~~~~~~~d  342 (406)
T d1ub2a1         263 ADVEDQGLGWINKTQSGIGRNAVTSGLEGAWTPHPTQWDNGYFAVCSLNYDWELKKNPAGAWQWEPINPREEDLPVDVED  342 (406)
T ss_dssp             SCGGGTTCCSCBCSSCCSGGGCBSSSCCBBSSSCTTSCSSTTTTTTTSSSCEEEEECTTSCEEEEESSCCGGGSCBCSSC
T ss_pred             cchhccCCccCCCCCccccccccCCCCCCCCccccccccCcchhhhhcccchhccccccccccccccCcccccCCCcccC
Confidence            00000000  112211100111122222   3579999999999874 1                               


Q ss_pred             -----cccccccchhcccCCChHHHHHHhhhCC
Q 039585          341 -----GLGLLRVDNMLVKDPRTKPLVDQYASNE  368 (368)
Q Consensus       341 -----~~glL~SD~~L~~d~~t~~~V~~yA~d~  368 (368)
                           +-.+|.+|++|..|+++|+++++||.|+
T Consensus       343 ~s~~~~~~mt~tDLal~~Dp~~R~iaE~Ya~d~  375 (406)
T d1ub2a1         343 PSIRRNLVMTDADMAMKMDPEYRKISERFYQDP  375 (406)
T ss_dssp             TTSBCCBCBCHHHHHHHHSHHHHHHHHHHHHCH
T ss_pred             CCCCcCCccchhHHhhccCHHHHHHHHHHHhCH
Confidence                 1257899999999999999999999874