Citrus Sinensis ID: 039636
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 129 | 2.2.26 [Sep-21-2011] | |||||||
| Q39172 | 345 | NADP-dependent alkenal do | no | no | 0.883 | 0.330 | 0.453 | 2e-27 | |
| Q6WAU0 | 342 | (+)-pulegone reductase OS | N/A | no | 0.891 | 0.336 | 0.438 | 5e-27 | |
| Q39173 | 343 | NADP-dependent alkenal do | no | no | 0.883 | 0.332 | 0.441 | 2e-26 | |
| Q29073 | 329 | Prostaglandin reductase 1 | yes | no | 0.852 | 0.334 | 0.318 | 2e-10 | |
| Q28719 | 349 | Prostaglandin reductase 1 | yes | no | 0.953 | 0.352 | 0.311 | 9e-10 | |
| Q3SZJ4 | 329 | Prostaglandin reductase 1 | yes | no | 0.852 | 0.334 | 0.318 | 2e-09 | |
| P97584 | 329 | Prostaglandin reductase 1 | yes | no | 0.852 | 0.334 | 0.306 | 3e-09 | |
| Q14914 | 329 | Prostaglandin reductase 1 | yes | no | 0.852 | 0.334 | 0.3 | 3e-08 | |
| Q9EQZ5 | 329 | Prostaglandin reductase 1 | yes | no | 0.852 | 0.334 | 0.306 | 5e-08 | |
| Q91YR9 | 329 | Prostaglandin reductase 1 | yes | no | 0.852 | 0.334 | 0.287 | 7e-08 |
| >sp|Q39172|P1_ARATH NADP-dependent alkenal double bond reductase P1 OS=Arabidopsis thaliana GN=P1 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 86/163 (52%), Gaps = 49/163 (30%)
Query: 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------ 42
MGCYVVGSAGSKEK++ LK KF FDDAFNYKEE DL ALKR
Sbjct: 179 MGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKML 238
Query: 43 ----------GQNARCSASKHETPRENCSMWNDLT--------------------YSKFL 72
G+ A C EN ++L+ YSKFL
Sbjct: 239 DAVLVNMNMHGRIAVCGMISQYN-LENQEGVHNLSNIIYKRIRIQGFVVSDFYDKYSKFL 297
Query: 73 DVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQAL 115
+ VLP IREGKI YVED+ +GLE AP AL+GLF G+NVGKQ +
Sbjct: 298 EFVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVV 340
|
Catalyzes the reduction of the 7-8 double bond of phenylpropanal substrates, such as p-coumaryl aldehyde and coniferyl aldehyde (in vitro). Has activity towards toxic substrates, such as 4-hydroxy-(2E)-nonenal (in vitro). May play a distinct role in plant antioxidant defense and is possibly involved in NAD(P)/NAD(P)H homeostasis. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: 7EC: 4 |
| >sp|Q6WAU0|PULR_MENPI (+)-pulegone reductase OS=Mentha piperita PE=1 SV=1 | Back alignment and function description |
|---|
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 87/162 (53%), Gaps = 47/162 (29%)
Query: 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------ 42
GCYVVGSAGSKEK++ LKNKF FDDAFNYKEE D TALKR
Sbjct: 176 FGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEESDYDTALKRHFPEGIDIYFDNVGGKML 235
Query: 43 ----------GQNARCSASKHETPRENCSMWNDLT-------------------YSKFLD 73
G+ A C + ++ + N L Y KFL+
Sbjct: 236 EAVINNMRVHGRIAVCGMVSQYSLKQPEGVHNLLKLIPKQIRMQGFVVVDYYHLYPKFLE 295
Query: 74 VVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQAL 115
+VLP I+EGK+ YVEDI EGLE+AP+ALLG++ GRNVG Q +
Sbjct: 296 MVLPRIKEGKVTYVEDISEGLESAPSALLGVYVGRNVGNQVV 337
|
Monoterpene synthase that catalyzes the specific reduction of the 4,8-double bond of (+)-pulegone to produce both (-)-menthone and (+)-isomenthone in a 70:30 ratio. Unable to utilize either (-)-isopiperitenone or (+)-cis-isopulegone, or to catalyze the reverse reaction with (-)-menthone or (+)-isomenthone. Has an absolute requirement for NADPH. Mentha piperita (taxid: 34256) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 8 EC: 1 |
| >sp|Q39173|P2_ARATH NADP-dependent alkenal double bond reductase P2 OS=Arabidopsis thaliana GN=P2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 86/163 (52%), Gaps = 49/163 (30%)
Query: 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------ 42
MGCYVVGSAGSKEK++ LK KF FDDAFNYKEE DL ALKR
Sbjct: 177 MGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPKGIDMYFENVGGKML 236
Query: 43 ----------GQNARCSASKHETPRENCSMWNDLT--------------------YSKFL 72
G+ A C EN ++L+ Y KFL
Sbjct: 237 DAVLLNMNPHGRIAVCGMISQYN-LENQEGVHNLSNIIYKRIRIQGFVVADFYDKYPKFL 295
Query: 73 DVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQAL 115
++VLP I+EGKI YVED+ +GLE AP AL+GLF G+NVGKQ +
Sbjct: 296 ELVLPRIKEGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVV 338
|
Catalyzes the reduction of the 7-8 double bond of phenylpropanal substrates, such as p-coumaryl aldehyde and coniferyl aldehyde (in vitro). Has activity towards toxic substrates, such as 4-hydroxy-(2E)-nonenal (in vitro) (By similarity). May play a distinct role in plant antioxidant defense and is possibly involved in NAD(P)/NAD(P)h homeostasis. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
| >sp|Q29073|PTGR1_PIG Prostaglandin reductase 1 OS=Sus scrofa GN=PTGR1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 67/160 (41%), Gaps = 50/160 (31%)
Query: 2 GCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------- 42
GC VVG+AGS EK+ LK K+ FD AFNYK + L LK+
Sbjct: 166 GCKVVGAAGSDEKVACLK-KYGFDVAFNYKTIESLEETLKKASPEGYDCYFDNVGGEFSN 224
Query: 43 ---------GQNARCSA--------SKHETPRENCSMWNDLTYSKFLDV----------- 74
G+ A C A P ++N+L + F+
Sbjct: 225 AVTSQMKKFGRIAICGAISTYNRTGPPPPGPPPEVVIYNELCFQGFIVTRWQGEVRQKAL 284
Query: 75 --VLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGK 112
+L + EGKI Y E I EG EN PAA +G+ G N+GK
Sbjct: 285 RDLLKWVSEGKIQYHEHITEGFENMPAAFMGMLKGENLGK 324
|
Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4. Sus scrofa (taxid: 9823) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
| >sp|Q28719|PTGR1_RABIT Prostaglandin reductase 1 OS=Oryctolagus cuniculus GN=PTGR1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 75/180 (41%), Gaps = 57/180 (31%)
Query: 2 GCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------- 42
GC VVG+AGS+EK++ LK K FD AFNYK + L LK+
Sbjct: 166 GCRVVGAAGSEEKVDYLK-KIGFDFAFNYKTVKSLEETLKKAAPDGYDCYFDNVGGEFSN 224
Query: 43 ---------GQNARCSA-----SKHETP---------RENCSM-------WNDLTYSKFL 72
G+ A C A S + P + M W K L
Sbjct: 225 TVIRQMKKFGRVAICGAISMYNSTGQLPPGPSPESVLYQEIRMEGFIFNRWKGEVGQKAL 284
Query: 73 DVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGK---QALDLDSCLVVLEPDSH 129
+L + EGKI Y E ++EG EN PAA + + G NVGK ++L +C +P H
Sbjct: 285 KELLTWVLEGKIQYREFVIEGFENMPAAFMRMLKGENVGKARSESLKSGTC----KPGDH 340
|
Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4. Oryctolagus cuniculus (taxid: 9986) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
| >sp|Q3SZJ4|PTGR1_BOVIN Prostaglandin reductase 1 OS=Bos taurus GN=PTGR1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 64/160 (40%), Gaps = 50/160 (31%)
Query: 2 GCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------- 42
GC VVG+AGS EK+ LK K FD A NYK + L ALK
Sbjct: 166 GCKVVGTAGSDEKVAWLK-KHGFDVALNYKTVKSLEEALKEAAPEGYDCYFDNVGGEFSN 224
Query: 43 ---------GQNARCSA------SKHETPRENCSM---------------WNDLTYSKFL 72
G+ A C A + +P + + W K L
Sbjct: 225 VAITQMKKFGRIAICGAISVYNRTSPLSPGPSPEIIIFKELHLQGFVVYRWQGEVRQKAL 284
Query: 73 DVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGK 112
+L + EGKI Y E + EG EN PAA +GL G N+GK
Sbjct: 285 RDLLKWVSEGKIQYHEHVTEGFENMPAAFIGLLKGENLGK 324
|
Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4. Bos taurus (taxid: 9913) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
| >sp|P97584|PTGR1_RAT Prostaglandin reductase 1 OS=Rattus norvegicus GN=Ptgr1 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 61/160 (38%), Gaps = 50/160 (31%)
Query: 2 GCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------- 42
GC VVG+AGS EK+ LK K FD AFNYK + L AL+
Sbjct: 166 GCKVVGTAGSDEKVAYLK-KLGFDVAFNYKTVKSLEEALRTASPDGYDCYFDNVGGEFSN 224
Query: 43 ---------GQNARCSASKHETPRENC---------------------SMWNDLTYSKFL 72
G+ A C A C + W K L
Sbjct: 225 TVILQMKTFGRIAICGAISQYNRTGPCPPGPSPEVIIYQQLRMEGFIVTRWQGEVRQKAL 284
Query: 73 DVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGK 112
++ + EGKI Y E I EG E PAA +G+ G N+GK
Sbjct: 285 TDLMNWVSEGKIRYHEYITEGFEKMPAAFMGMLKGDNLGK 324
|
Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
| >sp|Q14914|PTGR1_HUMAN Prostaglandin reductase 1 OS=Homo sapiens GN=PTGR1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 63/160 (39%), Gaps = 50/160 (31%)
Query: 2 GCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------- 42
GC VVG+ GS EK+ L+ K FD FNYK + L LK+
Sbjct: 166 GCKVVGAVGSDEKVAYLQ-KLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSN 224
Query: 43 ---------GQNARCSASK------------------HETPRENCSM---WNDLTYSKFL 72
G+ A C A ++ R + W K L
Sbjct: 225 TVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEAFVVYRWQGDARQKAL 284
Query: 73 DVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGK 112
+L + EGKI Y E I+EG EN PAA +G+ G N+GK
Sbjct: 285 KDLLKWVLEGKIQYKEYIIEGFENMPAAFMGMLKGDNLGK 324
|
Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha (By similarity). Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
| >sp|Q9EQZ5|PTGR1_CAVPO Prostaglandin reductase 1 OS=Cavia porcellus GN=Ptgr1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 65/160 (40%), Gaps = 50/160 (31%)
Query: 2 GCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------- 42
GC VVG+AGS EKI LK + FD AFNYK L ALK+
Sbjct: 166 GCKVVGAAGSDEKIAYLK-QIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLN 224
Query: 43 ---------GQNARCSASK--------HETPRENCSMWNDLTYSKFL------DV----- 74
G+ A C A P ++ L F+ DV
Sbjct: 225 TVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKAL 284
Query: 75 --VLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGK 112
++ + EGKI Y E + +G EN PAA + + +G N+GK
Sbjct: 285 RDLMKWVLEGKIQYHEHVTKGFENMPAAFIEMLNGANLGK 324
|
Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4. Cavia porcellus (taxid: 10141) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
| >sp|Q91YR9|PTGR1_MOUSE Prostaglandin reductase 1 OS=Mus musculus GN=Ptgr1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 59/160 (36%), Gaps = 50/160 (31%)
Query: 2 GCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------- 42
GC VVG+AGS EK+ LK K FD AFNYK + L AL+
Sbjct: 166 GCKVVGTAGSDEKVAYLK-KLGFDVAFNYKTVKSLEEALRTASPDGYDCYFDNVGGEFSN 224
Query: 43 ---------GQNARCSASKHETPRENCSM---------------------WNDLTYSKFL 72
G+ A C A C W K L
Sbjct: 225 AVILQMKTFGRIAICGAISQYNRTGPCPQGPAPEVVIYQQLRMEGFIVNRWQGEVRQKAL 284
Query: 73 DVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGK 112
++ + EGK+ E + EG E PAA +G+ G N+GK
Sbjct: 285 TELMNWVSEGKVQCHEYVTEGFEKMPAAFMGMLKGENLGK 324
|
Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 129 | ||||||
| 224092844 | 352 | predicted protein [Populus trichocarpa] | 0.906 | 0.332 | 0.481 | 1e-29 | |
| 255577885 | 332 | alcohol dehydrogenase, putative [Ricinus | 0.891 | 0.346 | 0.503 | 2e-29 | |
| 224117766 | 359 | predicted protein [Populus trichocarpa] | 0.891 | 0.320 | 0.481 | 1e-28 | |
| 224117774 | 359 | predicted protein [Populus trichocarpa] | 0.891 | 0.320 | 0.481 | 1e-28 | |
| 224107939 | 359 | predicted protein [Populus trichocarpa] | 0.906 | 0.325 | 0.475 | 2e-28 | |
| 224092846 | 351 | predicted protein [Populus trichocarpa] | 0.899 | 0.330 | 0.472 | 6e-28 | |
| 225434189 | 345 | PREDICTED: NADP-dependent alkenal double | 0.891 | 0.333 | 0.462 | 1e-27 | |
| 225434197 | 345 | PREDICTED: NADP-dependent alkenal double | 0.891 | 0.333 | 0.444 | 1e-27 | |
| 255577879 | 352 | alcohol dehydrogenase, putative [Ricinus | 0.883 | 0.323 | 0.484 | 2e-27 | |
| 255577881 | 368 | alcohol dehydrogenase, putative [Ricinus | 0.891 | 0.312 | 0.475 | 2e-27 |
| >gi|224092844|ref|XP_002309720.1| predicted protein [Populus trichocarpa] gi|222852623|gb|EEE90170.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 90/164 (54%), Gaps = 47/164 (28%)
Query: 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------ 42
MGCYVVGSAGSKEK+E LK+KF FDDAFNYKEE DLV ALKR
Sbjct: 186 MGCYVVGSAGSKEKVELLKSKFGFDDAFNYKEEHDLVAALKRYFPEGIDIYFENVGGKML 245
Query: 43 ----------GQNARCSASKHETPRENCSMWNDLT-------------------YSKFLD 73
G+ A C ++ + N T Y KFLD
Sbjct: 246 DAVLLNMRFHGRIAACGMISQYNLQQPEGLQNLTTVVFKRIRLEGFIIFDYFDQYPKFLD 305
Query: 74 VVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDL 117
VLP IREGKIVYVEDI EGLE+ P+AL+GLFSGRNVGKQ + +
Sbjct: 306 FVLPYIREGKIVYVEDITEGLEHGPSALVGLFSGRNVGKQVVKV 349
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255577885|ref|XP_002529815.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223530692|gb|EEF32564.1| alcohol dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/143 (50%), Positives = 89/143 (62%), Gaps = 28/143 (19%)
Query: 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR---------GQNARCSAS 51
MGCYVVGSAG++EK++ LKNKF FD+AFNYKEE D T LKR G+ A C
Sbjct: 184 MGCYVVGSAGTQEKVDILKNKFGFDEAFNYKEEPDFSTVLKRRRASEHELHGRIALCGMV 243
Query: 52 KHET---PRENCSMWNDL----------------TYSKFLDVVLPLIREGKIVYVEDIVE 92
P C++ + + Y KFLDVVLP I+EGKI YVEDIVE
Sbjct: 244 SQYNLVNPEGVCNLMSIVYKRVNMRGFAVFDYYPQYPKFLDVVLPYIKEGKITYVEDIVE 303
Query: 93 GLENAPAALLGLFSGRNVGKQAL 115
GLEN PAAL+GL++G+N+GKQ +
Sbjct: 304 GLENGPAALIGLYTGQNIGKQVV 326
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224117766|ref|XP_002331626.1| predicted protein [Populus trichocarpa] gi|222874022|gb|EEF11153.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/162 (48%), Positives = 88/162 (54%), Gaps = 47/162 (29%)
Query: 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------ 42
+GCYVVGSAGSKEK+E LK KF FDDAFNYKEE DL ALKR
Sbjct: 193 IGCYVVGSAGSKEKVELLKTKFGFDDAFNYKEEHDLDAALKRYFPEGIDIYFENVGGKML 252
Query: 43 ----------GQNARCSASKHETPRENCSMWNDLT-------------------YSKFLD 73
G+ A C + S+ N + YSKFLD
Sbjct: 253 DAVLLNMRHHGRIALCGMISQYNLEQPESVHNLIAVLFKQIRMEGFAVADYYDQYSKFLD 312
Query: 74 VVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQAL 115
VLP I+EGKIVYVEDI EGLE+ PAAL+GLFSGRNVGKQ +
Sbjct: 313 FVLPYIKEGKIVYVEDITEGLESGPAALIGLFSGRNVGKQVV 354
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224117774|ref|XP_002331628.1| predicted protein [Populus trichocarpa] gi|222874024|gb|EEF11155.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/162 (48%), Positives = 88/162 (54%), Gaps = 47/162 (29%)
Query: 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------ 42
+GCYVVGSAGSKEK+E LK KF FDDAFNYKEE DL ALKR
Sbjct: 193 IGCYVVGSAGSKEKVELLKTKFGFDDAFNYKEEHDLDAALKRYFPEGIDIYFENVGGKML 252
Query: 43 ----------GQNARCSASKHETPRENCSMWNDLT-------------------YSKFLD 73
G+ A C + S+ N + YSKFLD
Sbjct: 253 DAVLLNMRHHGRIALCGMISQYNLEQPESVQNLIALLFKQIRMEGFAVYEYYDQYSKFLD 312
Query: 74 VVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQAL 115
VLP I+EGKIVYVEDI EGLE+ PAAL+GLFSGRNVGKQ +
Sbjct: 313 FVLPYIKEGKIVYVEDITEGLESGPAALIGLFSGRNVGKQVV 354
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224107939|ref|XP_002333452.1| predicted protein [Populus trichocarpa] gi|222836645|gb|EEE75038.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/164 (47%), Positives = 89/164 (54%), Gaps = 47/164 (28%)
Query: 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------ 42
+GCYVVGSAGSKEK+E LK KF FDDAFNYKEE DL ALKR
Sbjct: 193 IGCYVVGSAGSKEKVELLKTKFGFDDAFNYKEEHDLDAALKRYFPEGIDIYFENVGGKML 252
Query: 43 ----------GQNARCSASKHETPRENCSMWNDLT-------------------YSKFLD 73
G+ A C + S+ N + YSKFLD
Sbjct: 253 DAVLLNMRHHGRIALCGMISQYNLEQPESVQNLIAVLYKHIRMEGFSVAEYYDQYSKFLD 312
Query: 74 VVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDL 117
VLP I+EGKIVYVEDI EGLE+ PAAL+GLFSGRNVGKQ + +
Sbjct: 313 FVLPCIKEGKIVYVEDITEGLESGPAALIGLFSGRNVGKQVVKV 356
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224092846|ref|XP_002309721.1| predicted protein [Populus trichocarpa] gi|118487031|gb|ABK95346.1| unknown [Populus trichocarpa] gi|222852624|gb|EEE90171.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/165 (47%), Positives = 90/165 (54%), Gaps = 49/165 (29%)
Query: 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------ 42
MGCYVVGSAGSKEK+E LK+KF FD AFNYKEE DL ALKR
Sbjct: 185 MGCYVVGSAGSKEKVELLKSKFGFDGAFNYKEEHDLDAALKRYFPEGIDIYFENVGGKML 244
Query: 43 ----------GQNARCSASKHETPRENCSMWNDLT--------------------YSKFL 72
G+ A C + ++ N LT YSKFL
Sbjct: 245 DAVLLNMRLRGRIAACGMISQYNLHQPETIQN-LTNIVYKRIRIQGFVVMDYFDQYSKFL 303
Query: 73 DVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDL 117
D +LP IREGKIVYVEDI EGLE+ PAAL+GLFSGRN+GKQ + +
Sbjct: 304 DFILPCIREGKIVYVEDIAEGLESGPAALIGLFSGRNIGKQVVKV 348
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225434189|ref|XP_002279359.1| PREDICTED: NADP-dependent alkenal double bond reductase P2 [Vitis vinifera] gi|147792339|emb|CAN61471.1| hypothetical protein VITISV_043825 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 92/162 (56%), Gaps = 47/162 (29%)
Query: 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------ 42
+GCYVVGSAG+KEK++ LKNKF FD+AFNYKEEQDL LKR
Sbjct: 179 LGCYVVGSAGTKEKVDLLKNKFGFDEAFNYKEEQDLEACLKRYFPEGIDIYFENVGGKML 238
Query: 43 ----------GQNARC---SASKHETPRENCSMWNDLT----------------YSKFLD 73
G+ A C S E P +++ +T Y KFLD
Sbjct: 239 DAVLVNMRLHGRIAVCGMISQYNLEEPEGVRNLFTIVTKRIRMEGFLVFDYYHLYPKFLD 298
Query: 74 VVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQAL 115
+++P IREGKIVYVEDI EGLE+AP AL+GL+SGRNVGKQ +
Sbjct: 299 LIMPYIREGKIVYVEDIAEGLESAPTALIGLYSGRNVGKQVV 340
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225434197|ref|XP_002279529.1| PREDICTED: NADP-dependent alkenal double bond reductase P2 [Vitis vinifera] gi|147783628|emb|CAN68149.1| hypothetical protein VITISV_035666 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 90/162 (55%), Gaps = 47/162 (29%)
Query: 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------ 42
+GCYVVGSAGSKEK++ LKNKF FD+AFNYKEEQDLV LKR
Sbjct: 179 IGCYVVGSAGSKEKVDLLKNKFGFDEAFNYKEEQDLVACLKRYFPEGIDIYFENVGGPML 238
Query: 43 ----------GQNARCSASKHETPRENCSMWNDLT-------------------YSKFLD 73
G+ A C + ++N + Y KFL+
Sbjct: 239 DAVLANMRVQGRIAACGMISQYNLDKPVGVYNLMNIIKKQIKMQGFVAGSYFHLYPKFLE 298
Query: 74 VVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQAL 115
++LP ++EGK+VYVEDI EGLE+AP AL+GLFSGRNVGKQ +
Sbjct: 299 MILPHVKEGKVVYVEDIAEGLESAPQALIGLFSGRNVGKQVV 340
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255577879|ref|XP_002529812.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223530689|gb|EEF32561.1| alcohol dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 86/161 (53%), Gaps = 47/161 (29%)
Query: 2 GCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------- 42
GCYVVGSAGSKEK+E LKNKF DDAFNYKE D ALKR
Sbjct: 187 GCYVVGSAGSKEKVELLKNKFGLDDAFNYKEVPDWDAALKRYFPEGIDIYFENVGGKMLD 246
Query: 43 ---------GQNARCSASKHETPRENCSMWNDLT-------------------YSKFLDV 74
G+ A C + + N +T YSKFLD
Sbjct: 247 AVLLNMRIHGRIAVCGMISQYNLEKPEGVHNLMTIVYKRVLIKGFVVTDYFNQYSKFLDF 306
Query: 75 VLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQAL 115
VLPLIREGKI YVEDI EGLE+APAAL+GLFSGRNVGKQ +
Sbjct: 307 VLPLIREGKITYVEDIAEGLESAPAALVGLFSGRNVGKQVV 347
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255577881|ref|XP_002529813.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223530690|gb|EEF32562.1| alcohol dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/162 (47%), Positives = 88/162 (54%), Gaps = 47/162 (29%)
Query: 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------ 42
MGCYVVGSAGSKEK++ LKNKF FD+AFNY+EE D ALKR
Sbjct: 202 MGCYVVGSAGSKEKVDLLKNKFGFDEAFNYREEHDWNAALKRYFPEGIDIYFENVGGKML 261
Query: 43 ----------GQNARCSASK-----------------HETPRENCSMWNDL--TYSKFLD 73
G+ A C H+ R + D YSKFLD
Sbjct: 262 DAVLLNMRTHGRIAACGMISQYNLEHPDGVHNLIVVVHKRIRIQGFISFDYFGQYSKFLD 321
Query: 74 VVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQAL 115
VLP IREGKI YVEDI EG+E+APAAL+GLFSGRNVGKQ +
Sbjct: 322 FVLPYIREGKITYVEDIAEGIESAPAALVGLFSGRNVGKQVV 363
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 129 | ||||||
| TAIR|locus:2097795 | 350 | AT3G03080 [Arabidopsis thalian | 0.356 | 0.131 | 0.782 | 1.8e-30 | |
| TAIR|locus:2148131 | 345 | AER "alkenal reductase" [Arabi | 0.325 | 0.121 | 0.809 | 2e-30 | |
| TAIR|locus:2148116 | 346 | AT5G16960 [Arabidopsis thalian | 0.325 | 0.121 | 0.809 | 4e-30 | |
| TAIR|locus:2153799 | 353 | AT5G37940 [Arabidopsis thalian | 0.387 | 0.141 | 0.68 | 6.3e-30 | |
| TAIR|locus:2028736 | 351 | AT1G26320 [Arabidopsis thalian | 0.356 | 0.131 | 0.760 | 9.3e-30 | |
| TAIR|locus:2148166 | 343 | AT5G16990 [Arabidopsis thalian | 0.325 | 0.122 | 0.809 | 1.1e-29 | |
| UNIPROTKB|Q6WAU0 | 342 | Q6WAU0 "(+)-pulegone reductase | 0.317 | 0.119 | 0.829 | 1.7e-29 | |
| TAIR|locus:2153759 | 353 | AT5G37980 [Arabidopsis thalian | 0.356 | 0.130 | 0.739 | 2.8e-29 | |
| TAIR|locus:2148186 | 345 | AT5G17000 [Arabidopsis thalian | 0.372 | 0.139 | 0.687 | 4.1e-29 | |
| TAIR|locus:2154041 | 353 | AT5G38000 [Arabidopsis thalian | 0.387 | 0.141 | 0.66 | 4.9e-29 |
| TAIR|locus:2097795 AT3G03080 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 188 (71.2 bits), Expect = 1.8e-30, Sum P(2) = 1.8e-30
Identities = 36/46 (78%), Positives = 40/46 (86%)
Query: 70 KFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQAL 115
KFLD VLP IREGKI YVED+VEGLEN P+ALLGLF G+NVGKQ +
Sbjct: 300 KFLDFVLPYIREGKITYVEDVVEGLENGPSALLGLFHGKNVGKQLI 345
|
|
| TAIR|locus:2148131 AER "alkenal reductase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 181 (68.8 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 34/42 (80%), Positives = 36/42 (85%)
Query: 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR 42
MGCYVVGSAGSKEK++ LK KF FDDAFNYKEE DL ALKR
Sbjct: 179 MGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKR 220
|
|
| TAIR|locus:2148116 AT5G16960 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 183 (69.5 bits), Expect = 4.0e-30, Sum P(2) = 4.0e-30
Identities = 34/42 (80%), Positives = 38/42 (90%)
Query: 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR 42
MGCYVVGSAGSKEK++ LKNKF FDDAFNYKEE +L+ ALKR
Sbjct: 180 MGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEHNLIGALKR 221
|
|
| TAIR|locus:2153799 AT5G37940 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 189 (71.6 bits), Expect = 6.3e-30, Sum P(2) = 6.3e-30
Identities = 34/50 (68%), Positives = 43/50 (86%)
Query: 68 YSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDL 117
YSKFLD +LP +REGKI YVEDI +GLEN P+AL+GLF G+NVGKQ +++
Sbjct: 301 YSKFLDFILPHVREGKITYVEDIAQGLENGPSALIGLFHGKNVGKQLVEV 350
|
|
| TAIR|locus:2028736 AT1G26320 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 182 (69.1 bits), Expect = 9.3e-30, Sum P(2) = 9.3e-30
Identities = 35/46 (76%), Positives = 38/46 (82%)
Query: 68 YSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQ 113
Y KFLD VLP IREGKI YVEDI EG E+ P+ALLGLF G+NVGKQ
Sbjct: 299 YPKFLDFVLPYIREGKITYVEDIAEGFESGPSALLGLFEGKNVGKQ 344
|
|
| TAIR|locus:2148166 AT5G16990 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 179 (68.1 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 34/42 (80%), Positives = 36/42 (85%)
Query: 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR 42
MGCYVVGSAGSKEK++ LK KF FDDAFNYKEE DL ALKR
Sbjct: 177 MGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKR 218
|
|
| UNIPROTKB|Q6WAU0 Q6WAU0 "(+)-pulegone reductase" [Mentha x piperita (taxid:34256)] | Back alignment and assigned GO terms |
|---|
Score = 179 (68.1 bits), Expect = 1.7e-29, Sum P(2) = 1.7e-29
Identities = 34/41 (82%), Positives = 36/41 (87%)
Query: 2 GCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR 42
GCYVVGSAGSKEK++ LKNKF FDDAFNYKEE D TALKR
Sbjct: 177 GCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEESDYDTALKR 217
|
|
| TAIR|locus:2153759 AT5G37980 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 188 (71.2 bits), Expect = 2.8e-29, Sum P(2) = 2.8e-29
Identities = 34/46 (73%), Positives = 40/46 (86%)
Query: 68 YSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQ 113
YSKFLD +LP +REGKI YVEDI +GLEN P+AL+GLF G+NVGKQ
Sbjct: 301 YSKFLDFILPYVREGKITYVEDIAQGLENGPSALIGLFHGKNVGKQ 346
|
|
| TAIR|locus:2148186 AT5G17000 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 176 (67.0 bits), Expect = 4.1e-29, Sum P(2) = 4.1e-29
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 68 YSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQAL 115
YSKFLD VLP I+EGKI YVED+ +GLE P AL+GLF G+NVGKQ +
Sbjct: 293 YSKFLDFVLPHIKEGKITYVEDVADGLEKGPEALVGLFHGKNVGKQVV 340
|
|
| TAIR|locus:2154041 AT5G38000 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 185 (70.2 bits), Expect = 4.9e-29, Sum P(2) = 4.9e-29
Identities = 33/50 (66%), Positives = 43/50 (86%)
Query: 68 YSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDL 117
YSKFLD +LP +REGK+ YVEDI +GLEN P+AL+GLF G+NVGKQ +++
Sbjct: 301 YSKFLDFILPHVREGKLTYVEDISQGLENGPSALIGLFHGKNVGKQLVEV 350
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| estExt_Genewise1_v1.C_LG_VII0401 | hypothetical protein (353 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 129 | |||
| PLN03154 | 348 | PLN03154, PLN03154, putative allyl alcohol dehydro | 7e-34 | |
| cd05288 | 329 | cd05288, PGDH, Prostaglandin dehydrogenases | 7e-27 | |
| cd08295 | 338 | cd08295, double_bond_reductase_like, Arabidopsis a | 7e-22 | |
| cd08294 | 329 | cd08294, leukotriene_B4_DH_like, 13-PGR is a bifun | 1e-17 | |
| cd08295 | 338 | cd08295, double_bond_reductase_like, Arabidopsis a | 2e-17 | |
| TIGR02825 | 325 | TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehy | 1e-13 | |
| COG2130 | 340 | COG2130, COG2130, Putative NADP-dependent oxidored | 1e-12 | |
| COG2130 | 340 | COG2130, COG2130, Putative NADP-dependent oxidored | 4e-07 | |
| cd08293 | 345 | cd08293, PTGR2, Prostaglandin reductase | 4e-07 | |
| cd05276 | 323 | cd05276, p53_inducible_oxidoreductase, PIG3 p53-in | 1e-05 | |
| cd08266 | 342 | cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t | 0.004 |
| >gnl|CDD|215606 PLN03154, PLN03154, putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 119 bits (301), Expect = 7e-34
Identities = 64/161 (39%), Positives = 87/161 (54%), Gaps = 47/161 (29%)
Query: 2 GCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------- 42
GCYVVGSAGS +K++ LKNK FD+AFNYKEE DL ALKR
Sbjct: 183 GCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNVGGDMLD 242
Query: 43 ---------GQNARC---SASKHETPRENCSMWNDLT----------------YSKFLDV 74
G+ A C S + + +++N ++ + +FL+
Sbjct: 243 AALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLEN 302
Query: 75 VLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQAL 115
V ++GKIVY+ED+ EGLE+APAAL+GLFSG+NVGKQ +
Sbjct: 303 VSRYYKQGKIVYIEDMSEGLESAPAALVGLFSGKNVGKQVI 343
|
Length = 348 |
| >gnl|CDD|176190 cd05288, PGDH, Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 7e-27
Identities = 49/159 (30%), Positives = 63/159 (39%), Gaps = 46/159 (28%)
Query: 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEE---QDLVTALKRG-------------- 43
+G VVG AGS EK L + FD A NYK + L A G
Sbjct: 169 LGARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAAPDGIDVYFDNVGGEILD 228
Query: 44 -------QNAR---CSA-----SKHETPRENCSM--WNDLT------------YSKFLDV 74
+ R C A + +N LT + + L
Sbjct: 229 AALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAE 288
Query: 75 VLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQ 113
+ + EGK+ Y ED+VEGLENAP A LGLF+G+N GK
Sbjct: 289 LAKWLAEGKLKYREDVVEGLENAPEAFLGLFTGKNTGKL 327
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329 |
| >gnl|CDD|176255 cd08295, double_bond_reductase_like, Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Score = 88.1 bits (219), Expect = 7e-22
Identities = 32/42 (76%), Positives = 34/42 (80%)
Query: 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR 42
GCYVVGSAGS EK++ LKNK FDDAFNYKEE DL ALKR
Sbjct: 175 KGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKR 216
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in inflamatory cells, and in other cells by bifunctional LTB4 12-HD/PGR. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 338 |
| >gnl|CDD|176254 cd08294, leukotriene_B4_DH_like, 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Score = 76.1 bits (188), Expect = 1e-17
Identities = 44/160 (27%), Positives = 62/160 (38%), Gaps = 52/160 (32%)
Query: 2 GCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALK-------------------- 41
GC V+G AGS +K+ LK + FD FNYK L ALK
Sbjct: 168 GCKVIGCAGSDDKVAWLK-ELGFDAVFNYKTV-SLEEALKEAAPDGIDCYFDNVGGEFSS 225
Query: 42 --------RGQNARCSA--SKHETPRENCSM-------------------WNDLTYSKFL 72
G+ A C + + ++ + W D + + L
Sbjct: 226 TVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQD-RWPEAL 284
Query: 73 DVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGK 112
+L I+EGK+ Y E + EG EN P A +G+ G N GK
Sbjct: 285 KQLLKWIKEGKLKYREHVTEGFENMPQAFIGMLKGENTGK 324
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329 |
| >gnl|CDD|176255 cd08295, double_bond_reductase_like, Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Score = 75.8 bits (187), Expect = 2e-17
Identities = 26/46 (56%), Positives = 36/46 (78%)
Query: 68 YSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQ 113
Y +FL+ + I+EGK+ YVEDI +GLE+AP A +GLF+G N+GKQ
Sbjct: 289 YPEFLEEMSGYIKEGKLKYVEDIADGLESAPEAFVGLFTGSNIGKQ 334
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in inflamatory cells, and in other cells by bifunctional LTB4 12-HD/PGR. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 338 |
| >gnl|CDD|131872 TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Score = 65.4 bits (159), Expect = 1e-13
Identities = 49/160 (30%), Positives = 62/160 (38%), Gaps = 50/160 (31%)
Query: 2 GCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------- 42
GC VVG+AGS EK+ LK K FD AFNYK + L LK+
Sbjct: 163 GCKVVGAAGSDEKVAYLK-KLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGEFSN 221
Query: 43 ---------GQNARCSASKHETPRENC---------------------SMWNDLTYSKFL 72
G+ A C A + W K L
Sbjct: 222 TVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKAL 281
Query: 73 DVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGK 112
+L + EGKI Y E ++EG EN PAA +G+ G N+GK
Sbjct: 282 KELLKWVLEGKIQYKEYVIEGFENMPAAFMGMLKGENLGK 321
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. Length = 325 |
| >gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Score = 62.7 bits (153), Expect = 1e-12
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 65 DLTYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQ 113
D + + L + ++EGKI Y E IV+GLENAP A +GL SG+N GK
Sbjct: 286 DQRFPEALRELGGWVKEGKIQYRETIVDGLENAPEAFIGLLSGKNFGKL 334
|
Length = 340 |
| >gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 4e-07
Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR 42
GC VVG AG EK + L + FD +YK E D ALK
Sbjct: 174 KGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAE-DFAQALKE 214
|
Length = 340 |
| >gnl|CDD|176253 cd08293, PTGR2, Prostaglandin reductase | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 4e-07
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 79 IREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQ 113
++EGK+ E + EGLENA A + +G N+GKQ
Sbjct: 307 VKEGKLKVKETVYEGLENAGEAFQSMMNGGNIGKQ 341
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 345 |
| >gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Score = 42.8 bits (102), Expect = 1e-05
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR 42
+G V+ +AGS+EK+E + A D A NY+ E D +K
Sbjct: 163 LGARVIATAGSEEKLEACRALGA-DVAINYRTE-DFAEEVKE 202
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323 |
| >gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 35.3 bits (82), Expect = 0.004
Identities = 39/155 (25%), Positives = 56/155 (36%), Gaps = 40/155 (25%)
Query: 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQ--------------DLV--------- 37
G V+ +AGS++K+ER K A D +Y++E D+V
Sbjct: 190 FGATVIATAGSEDKLERAKELGA-DYVIDYRKEDFVREVRELTGKRGVDVVVEHVGAATW 248
Query: 38 ----TALKRGQN-ARCSASKHETPRENCS--MWNDL--------TYSKFLDVVLPLIREG 82
+L RG C A+ + W L T ++ + L L+ G
Sbjct: 249 EKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGTKAELDE-ALRLVFRG 307
Query: 83 KIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDL 117
K+ V D V LE A A L S GK L
Sbjct: 308 KLKPVIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 129 | |||
| COG2130 | 340 | Putative NADP-dependent oxidoreductases [General f | 99.79 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 99.68 | |
| KOG1196 | 343 | consensus Predicted NAD-dependent oxidoreductase [ | 99.67 | |
| KOG1197 | 336 | consensus Predicted quinone oxidoreductase [Energy | 99.61 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 99.54 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 99.54 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 99.5 | |
| cd08291 | 324 | ETR_like_1 2-enoyl thioester reductase (ETR) like | 99.42 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 99.37 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 99.35 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 99.33 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 99.33 | |
| PLN02178 | 375 | cinnamyl-alcohol dehydrogenase | 99.31 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 99.3 | |
| TIGR02822 | 329 | adh_fam_2 zinc-binding alcohol dehydrogenase famil | 99.29 | |
| cd08239 | 339 | THR_DH_like L-threonine dehydrogenase (TDH)-like. | 99.27 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 99.26 | |
| cd08281 | 371 | liver_ADH_like1 Zinc-dependent alcohol dehydrogena | 99.25 | |
| PLN02514 | 357 | cinnamyl-alcohol dehydrogenase | 99.22 | |
| PLN02586 | 360 | probable cinnamyl alcohol dehydrogenase | 99.21 | |
| COG1062 | 366 | AdhC Zn-dependent alcohol dehydrogenases, class II | 99.19 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 99.18 | |
| TIGR03451 | 358 | mycoS_dep_FDH mycothiol-dependent formaldehyde deh | 99.17 | |
| PRK10309 | 347 | galactitol-1-phosphate dehydrogenase; Provisional | 99.16 | |
| TIGR03201 | 349 | dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co | 99.16 | |
| cd08233 | 351 | butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog | 99.14 | |
| cd08296 | 333 | CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci | 99.13 | |
| PLN02827 | 378 | Alcohol dehydrogenase-like | 99.09 | |
| cd08300 | 368 | alcohol_DH_class_III class III alcohol dehydrogena | 99.0 | |
| KOG0022 | 375 | consensus Alcohol dehydrogenase, class III [Second | 98.99 | |
| cd08297 | 341 | CAD3 Cinnamyl alcohol dehydrogenases (CAD). These | 98.99 | |
| cd08292 | 324 | ETR_like_2 2-enoyl thioester reductase (ETR) like | 98.96 | |
| cd08238 | 410 | sorbose_phosphate_red L-sorbose-1-phosphate reduct | 98.96 | |
| PRK10083 | 339 | putative oxidoreductase; Provisional | 98.96 | |
| TIGR02818 | 368 | adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr | 98.95 | |
| KOG0024 | 354 | consensus Sorbitol dehydrogenase [Secondary metabo | 98.94 | |
| PF13602 | 127 | ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ | 98.94 | |
| cd08261 | 337 | Zn_ADH7 Alcohol dehydrogenases of the MDR family. | 98.92 | |
| PLN02740 | 381 | Alcohol dehydrogenase-like | 98.92 | |
| cd08244 | 324 | MDR_enoyl_red Possible enoyl reductase. Member ide | 98.9 | |
| cd08285 | 351 | NADP_ADH NADP(H)-dependent alcohol dehydrogenases. | 98.9 | |
| cd08246 | 393 | crotonyl_coA_red crotonyl-CoA reductase. Crotonyl- | 98.9 | |
| cd05283 | 337 | CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam | 98.9 | |
| TIGR01751 | 398 | crot-CoA-red crotonyl-CoA reductase. The enzyme mo | 98.89 | |
| PRK09422 | 338 | ethanol-active dehydrogenase/acetaldehyde-active r | 98.89 | |
| PRK10754 | 327 | quinone oxidoreductase, NADPH-dependent; Provision | 98.86 | |
| cd05282 | 323 | ETR_like 2-enoyl thioester reductase-like. 2-enoyl | 98.86 | |
| cd05284 | 340 | arabinose_DH_like D-arabinose dehydrogenase. This | 98.81 | |
| cd08240 | 350 | 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy | 98.81 | |
| cd08230 | 355 | glucose_DH Glucose dehydrogenase. Glucose dehydrog | 98.8 | |
| PTZ00354 | 334 | alcohol dehydrogenase; Provisional | 98.8 | |
| PRK05396 | 341 | tdh L-threonine 3-dehydrogenase; Validated | 98.79 | |
| cd08277 | 365 | liver_alcohol_DH_like Liver alcohol dehydrogenase. | 98.78 | |
| cd08276 | 336 | MDR7 Medium chain dehydrogenases/reductase (MDR)/z | 98.77 | |
| TIGR00692 | 340 | tdh L-threonine 3-dehydrogenase. E. coli His-90 mo | 98.77 | |
| cd05288 | 329 | PGDH Prostaglandin dehydrogenases. Prostaglandins | 98.76 | |
| cd08231 | 361 | MDR_TM0436_like Hypothetical enzyme TM0436 resembl | 98.75 | |
| cd08301 | 369 | alcohol_DH_plants Plant alcohol dehydrogenase. NAD | 98.74 | |
| cd05286 | 320 | QOR2 Quinone oxidoreductase (QOR). Quinone oxidore | 98.73 | |
| cd08263 | 367 | Zn_ADH10 Alcohol dehydrogenases of the MDR family. | 98.73 | |
| cd08274 | 350 | MDR9 Medium chain dehydrogenases/reductase (MDR)/z | 98.72 | |
| cd05280 | 325 | MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone | 98.69 | |
| cd08235 | 343 | iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ | 98.69 | |
| cd08269 | 312 | Zn_ADH9 Alcohol dehydrogenases of the MDR family. | 98.68 | |
| PF00107 | 130 | ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: | 98.68 | |
| cd08254 | 338 | hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo | 98.68 | |
| cd08243 | 320 | quinone_oxidoreductase_like_1 Quinone oxidoreducta | 98.67 | |
| cd08249 | 339 | enoyl_reductase_like enoyl_reductase_like. Member | 98.67 | |
| TIGR02817 | 336 | adh_fam_1 zinc-binding alcohol dehydrogenase famil | 98.67 | |
| TIGR01202 | 308 | bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl | 98.67 | |
| cd08251 | 303 | polyketide_synthase polyketide synthase. Polyketid | 98.67 | |
| cd05281 | 341 | TDH Threonine dehydrogenase. L-threonine dehydroge | 98.66 | |
| TIGR02823 | 323 | oxido_YhdH putative quinone oxidoreductase, YhdH/Y | 98.65 | |
| COG1063 | 350 | Tdh Threonine dehydrogenase and related Zn-depende | 98.65 | |
| cd08290 | 341 | ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi | 98.64 | |
| cd08256 | 350 | Zn_ADH2 Alcohol dehydrogenases of the MDR family. | 98.64 | |
| cd08260 | 345 | Zn_ADH6 Alcohol dehydrogenases of the MDR family. | 98.63 | |
| cd08287 | 345 | FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik | 98.63 | |
| cd08289 | 326 | MDR_yhfp_like Yhfp putative quinone oxidoreductase | 98.62 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 98.61 | |
| cd08250 | 329 | Mgc45594_like Mgc45594 gene product and other MDR | 98.61 | |
| cd05278 | 347 | FDH_like Formaldehyde dehydrogenases. Formaldehyde | 98.61 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 98.61 | |
| cd08288 | 324 | MDR_yhdh Yhdh putative quinone oxidoreductases. Yh | 98.6 | |
| cd08232 | 339 | idonate-5-DH L-idonate 5-dehydrogenase. L-idonate | 98.59 | |
| cd08270 | 305 | MDR4 Medium chain dehydrogenases/reductase (MDR)/z | 98.59 | |
| cd08286 | 345 | FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik | 98.57 | |
| cd08284 | 344 | FDH_like_2 Glutathione-dependent formaldehyde dehy | 98.55 | |
| cd08278 | 365 | benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be | 98.54 | |
| cd05285 | 343 | sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a | 98.53 | |
| cd08265 | 384 | Zn_ADH3 Alcohol dehydrogenases of the MDR family. | 98.52 | |
| cd08237 | 341 | ribitol-5-phosphate_DH ribitol-5-phosphate dehydro | 98.51 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 98.49 | |
| cd08262 | 341 | Zn_ADH8 Alcohol dehydrogenases of the MDR family. | 98.49 | |
| PRK13771 | 334 | putative alcohol dehydrogenase; Provisional | 98.47 | |
| cd05195 | 293 | enoyl_red enoyl reductase of polyketide synthase. | 98.46 | |
| TIGR02824 | 325 | quinone_pig3 putative NAD(P)H quinone oxidoreducta | 98.46 | |
| cd08252 | 336 | AL_MDR Arginate lyase and other MDR family members | 98.45 | |
| cd08279 | 363 | Zn_ADH_class_III Class III alcohol dehydrogenase. | 98.44 | |
| cd08242 | 319 | MDR_like Medium chain dehydrogenases/reductase (MD | 98.43 | |
| cd08245 | 330 | CAD Cinnamyl alcohol dehydrogenases (CAD) and rela | 98.42 | |
| smart00829 | 288 | PKS_ER Enoylreductase. Enoylreductase in Polyketid | 98.4 | |
| cd05276 | 323 | p53_inducible_oxidoreductase PIG3 p53-inducible qu | 98.38 | |
| cd08271 | 325 | MDR5 Medium chain dehydrogenases/reductase (MDR)/z | 98.38 | |
| cd08236 | 343 | sugar_DH NAD(P)-dependent sugar dehydrogenases. Th | 98.36 | |
| cd08241 | 323 | QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t | 98.36 | |
| cd08234 | 334 | threonine_DH_like L-threonine dehydrogenase. L-thr | 98.36 | |
| TIGR02819 | 393 | fdhA_non_GSH formaldehyde dehydrogenase, glutathio | 98.35 | |
| PLN02702 | 364 | L-idonate 5-dehydrogenase | 98.35 | |
| cd08298 | 329 | CAD2 Cinnamyl alcohol dehydrogenases (CAD). These | 98.34 | |
| cd08272 | 326 | MDR6 Medium chain dehydrogenases/reductase (MDR)/z | 98.32 | |
| cd08248 | 350 | RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu | 98.28 | |
| cd08283 | 386 | FDH_like_1 Glutathione-dependent formaldehyde dehy | 98.27 | |
| cd08268 | 328 | MDR2 Medium chain dehydrogenases/reductase (MDR)/z | 98.23 | |
| cd08282 | 375 | PFDH_like Pseudomonas putida aldehyde-dismutating | 98.23 | |
| cd08267 | 319 | MDR1 Medium chain dehydrogenases/reductase (MDR)/z | 98.17 | |
| cd08299 | 373 | alcohol_DH_class_I_II_IV class I, II, IV alcohol d | 98.13 | |
| cd05289 | 309 | MDR_like_2 alcohol dehydrogenase and quinone reduc | 98.1 | |
| cd08273 | 331 | MDR8 Medium chain dehydrogenases/reductase (MDR)/z | 98.02 | |
| cd05279 | 365 | Zn_ADH1 Liver alcohol dehydrogenase and related zi | 97.98 | |
| cd08255 | 277 | 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_ | 97.89 | |
| cd08275 | 337 | MDR3 Medium chain dehydrogenases/reductase (MDR)/z | 97.76 | |
| cd08264 | 325 | Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam | 97.57 | |
| KOG0025 | 354 | consensus Zn2+-binding dehydrogenase (nuclear rece | 97.56 | |
| TIGR03366 | 280 | HpnZ_proposed putative phosphonate catabolism asso | 97.55 | |
| cd08247 | 352 | AST1_like AST1 is a cytoplasmic protein associated | 96.75 | |
| cd08258 | 306 | Zn_ADH4 Alcohol dehydrogenases of the MDR family. | 96.22 | |
| cd00401 | 413 | AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado | 94.35 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 90.48 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 85.74 |
| >COG2130 Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-18 Score=123.07 Aligned_cols=118 Identities=38% Similarity=0.623 Sum_probs=99.4
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc----------------------------ccEEEecC--
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR----------------------------GQNARCSA-- 50 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~----------------------------G~~v~~G~-- 50 (129)
.||+|++++++++|.+++++.+|.|.+|||++ +++.+.+.+ ||++.||.
T Consensus 174 kG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~-~d~~~~L~~a~P~GIDvyfeNVGg~v~DAv~~~ln~~aRi~~CG~IS 252 (340)
T COG2130 174 KGCRVVGIAGGAEKCDFLTEELGFDAGIDYKA-EDFAQALKEACPKGIDVYFENVGGEVLDAVLPLLNLFARIPVCGAIS 252 (340)
T ss_pred hCCeEEEecCCHHHHHHHHHhcCCceeeecCc-ccHHHHHHHHCCCCeEEEEEcCCchHHHHHHHhhccccceeeeeehh
Confidence 48999999999999999996699999999999 899999887 89999998
Q ss_pred -CCCCCCC---CC--cceeccc-------------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccc
Q 039636 51 -SKHETPR---EN--CSMWNDL-------------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVG 111 (129)
Q Consensus 51 -~~~~~~~---~~--~l~~~~~-------------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~G 111 (129)
|+...++ ++ .++.++. ...++.+++..|+.+|+|+...+++..|+++++||.-+.+|+++|
T Consensus 253 ~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~eti~dGlEnaP~Af~gLl~G~N~G 332 (340)
T COG2130 253 QYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRETIVDGLENAPEAFIGLLSGKNFG 332 (340)
T ss_pred hcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEeeehhhhhccHHHHHHHhcCCccc
Confidence 5544221 11 2232222 456899999999999999999988779999999999999999999
Q ss_pred eEEEEeCC
Q 039636 112 KQALDLDS 119 (129)
Q Consensus 112 kvvv~~~~ 119 (129)
|.|+++.+
T Consensus 333 K~vvKv~~ 340 (340)
T COG2130 333 KLVVKVAD 340 (340)
T ss_pred eEEEEecC
Confidence 99999864
|
|
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.68 E-value=9.8e-16 Score=111.27 Aligned_cols=116 Identities=23% Similarity=0.253 Sum_probs=93.1
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc------------------------ccEEEecCCC-CCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------------GQNARCSASK-HET 55 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~------------------------G~~v~~G~~~-~~~ 55 (129)
+||+|++++++++|+++++ +||+|++++.++ +++.+.+.+ |+++.+|... ...
T Consensus 189 ~ga~Via~~~~~~K~e~a~-~lGAd~~i~~~~-~~~~~~~~~~~d~ii~tv~~~~~~~~l~~l~~~G~~v~vG~~~~~~~ 266 (339)
T COG1064 189 MGAEVIAITRSEEKLELAK-KLGADHVINSSD-SDALEAVKEIADAIIDTVGPATLEPSLKALRRGGTLVLVGLPGGGPI 266 (339)
T ss_pred cCCeEEEEeCChHHHHHHH-HhCCcEEEEcCC-chhhHHhHhhCcEEEECCChhhHHHHHHHHhcCCEEEEECCCCCccc
Confidence 5899999999999999998 999999999875 666666552 9999999832 111
Q ss_pred CCCC--cceeccc-------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEEeC
Q 039636 56 PREN--CSMWNDL-------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDLD 118 (129)
Q Consensus 56 ~~~~--~l~~~~~-------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~~ 118 (129)
+..+ .++.++. .....+++++++..+|.|+|.+..+++|+++++||++|++++..|++||++.
T Consensus 267 ~~~~~~~li~~~~~i~GS~~g~~~d~~e~l~f~~~g~Ikp~i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~ 338 (339)
T COG1064 267 PLLPAFLLILKEISIVGSLVGTRADLEEALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAVIDMS 338 (339)
T ss_pred CCCCHHHhhhcCeEEEEEecCCHHHHHHHHHHHHhCCceeeEEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence 1111 2333322 5577889999999999999999656899999999999999999999999864
|
|
| >KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.9e-16 Score=110.05 Aligned_cols=119 Identities=61% Similarity=1.043 Sum_probs=99.6
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc----------------------------ccEEEecC--
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR----------------------------GQNARCSA-- 50 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~----------------------------G~~v~~G~-- 50 (129)
+||.|+++++|++|.+++++++|.|.+|||++..++.+++++ ||++.||.
T Consensus 177 ~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNVGG~~lDavl~nM~~~gri~~CG~IS 256 (343)
T KOG1196|consen 177 MGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENVGGKMLDAVLLNMNLHGRIAVCGMIS 256 (343)
T ss_pred cCCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEeccCcHHHHHHHHhhhhccceEeeeeeh
Confidence 589999999999999999988999999999983377888777 99999998
Q ss_pred -CCCCCCC--CC--cceeccc------------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceE
Q 039636 51 -SKHETPR--EN--CSMWNDL------------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQ 113 (129)
Q Consensus 51 -~~~~~~~--~~--~l~~~~~------------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkv 113 (129)
++...+. +| .++.++. ...++++.+.+++++|+|+...++...|+..++||.-|.+|++.||.
T Consensus 257 qYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~edi~~Glen~P~A~vglf~GkNvGKq 336 (343)
T KOG1196|consen 257 QYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVEDIADGLENGPSALVGLFHGKNVGKQ 336 (343)
T ss_pred hccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEehhHHHHHhccHHHHHHHhccCcccce
Confidence 4433322 23 3344332 56888999999999999999988877999999999999999999999
Q ss_pred EEEeCC
Q 039636 114 ALDLDS 119 (129)
Q Consensus 114 vv~~~~ 119 (129)
++.+..
T Consensus 337 iv~va~ 342 (343)
T KOG1196|consen 337 LVKVAR 342 (343)
T ss_pred EEEeec
Confidence 999864
|
|
| >KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.2e-14 Score=101.26 Aligned_cols=119 Identities=19% Similarity=0.233 Sum_probs=96.5
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~ 51 (129)
.|+++|+++++.+|.+.++ +.|+.|.|+|+. +|+.+++.+ |.+|.+|..
T Consensus 170 ~~a~tI~~asTaeK~~~ak-enG~~h~I~y~~-eD~v~~V~kiTngKGVd~vyDsvG~dt~~~sl~~Lk~~G~mVSfG~a 247 (336)
T KOG1197|consen 170 VGAHTIATASTAEKHEIAK-ENGAEHPIDYST-EDYVDEVKKITNGKGVDAVYDSVGKDTFAKSLAALKPMGKMVSFGNA 247 (336)
T ss_pred cCcEEEEEeccHHHHHHHH-hcCCcceeeccc-hhHHHHHHhccCCCCceeeeccccchhhHHHHHHhccCceEEEeccc
Confidence 4789999999999999998 999999999998 899998887 788888873
Q ss_pred CCCCCC--------CC-cceeccc--------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEE
Q 039636 52 KHETPR--------EN-CSMWNDL--------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQA 114 (129)
Q Consensus 52 ~~~~~~--------~~-~l~~~~~--------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvv 114 (129)
++...+ ++ .+.+.++ .+.....+++.++.+|.|++.++.+|||+++.+|+..+++++..||++
T Consensus 248 sgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~I~~~ypls~vadA~~diesrktvGkvl 327 (336)
T KOG1197|consen 248 SGLIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIHIDHVYPLSKVADAHADIESRKTVGKVL 327 (336)
T ss_pred cCCCCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCccceeeeeecchHHHHHHHHHHHhhhccceEE
Confidence 332211 01 2222221 345577889999999999999999999999999999999999999999
Q ss_pred EEeCCCc
Q 039636 115 LDLDSCL 121 (129)
Q Consensus 115 v~~~~~~ 121 (129)
+...++.
T Consensus 328 Llp~~~~ 334 (336)
T KOG1197|consen 328 LLPGPEK 334 (336)
T ss_pred EeCCccc
Confidence 9887653
|
|
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.2e-13 Score=101.50 Aligned_cols=119 Identities=53% Similarity=0.865 Sum_probs=88.2
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc----------------------------ccEEEecCCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR----------------------------GQNARCSASK 52 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~----------------------------G~~v~~G~~~ 52 (129)
+|++|++++++++|.+++++++|+++++|+++..++.+.+++ |+++.+|...
T Consensus 182 ~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvD~v~d~vG~~~~~~~~~~l~~~G~iv~~G~~~ 261 (348)
T PLN03154 182 HGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNVGGDMLDAALLNMKIHGRIAVCGMVS 261 (348)
T ss_pred cCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCCCCcEEEEECCCHHHHHHHHHHhccCCEEEEECccc
Confidence 488999999999999988646999999998741255554432 8898888622
Q ss_pred CCCC-----CCC--cceeccc------------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceE
Q 039636 53 HETP-----REN--CSMWNDL------------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQ 113 (129)
Q Consensus 53 ~~~~-----~~~--~l~~~~~------------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkv 113 (129)
.... ..+ .++.++. ...+.++++++++.+|.|++.+..+++|+++++||+.+++++..||+
T Consensus 262 ~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~~~~~~~L~~~~~A~~~l~~g~~~GKv 341 (348)
T PLN03154 262 LNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYIEDMSEGLESAPAALVGLFSGKNVGKQ 341 (348)
T ss_pred cCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCceecccCHHHHHHHHHHHHcCCCCceE
Confidence 1110 001 1222221 12456788999999999999887779999999999999999999999
Q ss_pred EEEeCC
Q 039636 114 ALDLDS 119 (129)
Q Consensus 114 vv~~~~ 119 (129)
||++++
T Consensus 342 Vl~~~~ 347 (348)
T PLN03154 342 VIRVAK 347 (348)
T ss_pred EEEecC
Confidence 999864
|
|
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.4e-13 Score=100.49 Aligned_cols=115 Identities=31% Similarity=0.398 Sum_probs=85.9
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~ 51 (129)
+|+++++++++++|.++++ ++|+|++++|++ ++|.+++++ |+++.||..
T Consensus 166 ~G~~~v~~~~s~~k~~~~~-~lGAd~vi~y~~-~~~~~~v~~~t~g~gvDvv~D~vG~~~~~~~l~~l~~~G~lv~ig~~ 243 (326)
T COG0604 166 LGATVVAVVSSSEKLELLK-ELGADHVINYRE-EDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAALAPGGRLVSIGAL 243 (326)
T ss_pred cCCcEEEEecCHHHHHHHH-hcCCCEEEcCCc-ccHHHHHHHHcCCCCceEEEECCCHHHHHHHHHHhccCCEEEEEecC
Confidence 4778888888888888887 999999999998 789999875 899999874
Q ss_pred CC-CCCCCC--cceeccc-------------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHc-CCccceEE
Q 039636 52 KH-ETPREN--CSMWNDL-------------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFS-GRNVGKQA 114 (129)
Q Consensus 52 ~~-~~~~~~--~l~~~~~-------------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~-~~~~Gkvv 114 (129)
++ .....+ .++.+.. ...+.++++++++.+|.++|.+..+|||++..++..+... ++..||+|
T Consensus 244 ~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~i~~~~~l~e~~~a~a~~~~~~~~~GKvv 323 (326)
T COG0604 244 SGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKLKPVIDRVYPLAEAPAAAAHLLLERRTTGKVV 323 (326)
T ss_pred CCCCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCCcceeccEechhhhHHHHHHHHcccCCcceEE
Confidence 32 111111 1111111 2367899999999999999999988999995544444444 58999999
Q ss_pred EEe
Q 039636 115 LDL 117 (129)
Q Consensus 115 v~~ 117 (129)
+++
T Consensus 324 l~~ 326 (326)
T COG0604 324 LKV 326 (326)
T ss_pred EeC
Confidence 874
|
|
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.50 E-value=4.4e-13 Score=96.08 Aligned_cols=120 Identities=17% Similarity=0.121 Sum_probs=90.9
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc---------------------------ccEEEecCCCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR---------------------------GQNARCSASKH 53 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~---------------------------G~~v~~G~~~~ 53 (129)
+|++|+++++++.|++.+.+.||||++++..+.+++.+++.. |++|.+|....
T Consensus 204 MG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v~~~a~~~~~~~~~~lk~~Gt~V~vg~p~~ 283 (360)
T KOG0023|consen 204 MGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTVSNLAEHALEPLLGLLKVNGTLVLVGLPEK 283 (360)
T ss_pred hCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHhhcCcceeeeeccccchHHHHHHhhcCCEEEEEeCcCC
Confidence 689999999988555555558999999988832677766665 88888887332
Q ss_pred CC-CCCCcceeccc-------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEEeCCCc
Q 039636 54 ET-PRENCSMWNDL-------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDLDSCL 121 (129)
Q Consensus 54 ~~-~~~~~l~~~~~-------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~~~~~ 121 (129)
.. ....+++..+. ......+++++++.+|.|++.+.. .+++++++|+++|++++..+|.||+++.+.
T Consensus 284 ~~~~~~~~lil~~~~I~GS~vG~~ket~E~Ldf~a~~~ik~~IE~-v~~~~v~~a~erm~kgdV~yRfVvD~s~~~ 358 (360)
T KOG0023|consen 284 PLKLDTFPLILGRKSIKGSIVGSRKETQEALDFVARGLIKSPIEL-VKLSEVNEAYERMEKGDVRYRFVVDVSKSL 358 (360)
T ss_pred cccccchhhhcccEEEEeeccccHHHHHHHHHHHHcCCCcCceEE-EehhHHHHHHHHHHhcCeeEEEEEEccccc
Confidence 11 11112222222 556778999999999999999886 599999999999999999999999987653
|
|
| >cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1 | Back alignment and domain information |
|---|
Probab=99.42 E-value=3.5e-12 Score=92.61 Aligned_cols=113 Identities=15% Similarity=0.090 Sum_probs=84.3
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~ 51 (129)
+|++|++++++++|.+.++ ++|+++++++++ .++.+.+++ |+++.+|..
T Consensus 167 ~G~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~-~~~~~~v~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~ 244 (324)
T cd08291 167 DGIKVINIVRRKEQVDLLK-KIGAEYVLNSSD-PDFLEDLKELIAKLNATIFFDAVGGGLTGQILLAMPYGSTLYVYGYL 244 (324)
T ss_pred cCCEEEEEeCCHHHHHHHH-HcCCcEEEECCC-ccHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHhhCCCCEEEEEEec
Confidence 4889999999999999998 899999999887 667665543 788887752
Q ss_pred CCCC---CCCCcceeccc-------------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEE
Q 039636 52 KHET---PRENCSMWNDL-------------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQAL 115 (129)
Q Consensus 52 ~~~~---~~~~~l~~~~~-------------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv 115 (129)
+... .....++.++. ...+.++++++++. |.+++.+..+|+|+++.+||+.+.+++..||++|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~ 323 (324)
T cd08291 245 SGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TELKTTFASRYPLALTLEAIAFYSKNMSTGKKLL 323 (324)
T ss_pred CCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-CccccceeeEEcHHHHHHHHHHHHhCCCCCeEEe
Confidence 1111 10001111111 12557888999998 9999988888999999999999999999999987
Q ss_pred E
Q 039636 116 D 116 (129)
Q Consensus 116 ~ 116 (129)
.
T Consensus 324 ~ 324 (324)
T cd08291 324 I 324 (324)
T ss_pred C
Confidence 3
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin |
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=7.3e-12 Score=91.77 Aligned_cols=115 Identities=12% Similarity=0.112 Sum_probs=82.4
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc---------------------------ccEEEecCCC
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR---------------------------GQNARCSASK 52 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~---------------------------G~~v~~G~~~ 52 (129)
+|+ +|++++.+++++++++ ++|+++++|+++ +++.+.... |+++.+|...
T Consensus 192 ~G~~~Vi~~~~~~~~~~~a~-~lGa~~vi~~~~-~~~~~~~~~~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~ 269 (343)
T PRK09880 192 LGAAEIVCADVSPRSLSLAR-EMGADKLVNPQN-DDLDHYKAEKGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGG 269 (343)
T ss_pred cCCcEEEEEeCCHHHHHHHH-HcCCcEEecCCc-ccHHHHhccCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCC
Confidence 477 6999999999999998 899999999876 454432211 8888887622
Q ss_pred CCCC-CCCcceeccc------chHHHHHHHHHHHHcCCcee--eeeeecCcccHHHHHHHHHcCCccceEEEEe
Q 039636 53 HETP-RENCSMWNDL------TYSKFLDVVLPLIREGKIVY--VEDIVEGLENAPAALLGLFSGRNVGKQALDL 117 (129)
Q Consensus 53 ~~~~-~~~~l~~~~~------~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~ 117 (129)
.... ....++.++. ...+.++++++++.+|.|++ .+..+|+|+++++||+.+.+++..||+++.+
T Consensus 270 ~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 270 APPEFPMMTLIVKEISLKGSFRFTEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred CCCccCHHHHHhCCcEEEEEeeccccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 1111 0001222211 23456899999999999986 3455689999999999999988889999863
|
|
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=99.35 E-value=2e-11 Score=88.35 Aligned_cols=115 Identities=38% Similarity=0.715 Sum_probs=85.1
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc----------------------------ccEEEecCC-
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR----------------------------GQNARCSAS- 51 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~----------------------------G~~v~~G~~- 51 (129)
+|++|+++++++++.+.++ ++|+++++++++ +++.+.+++ |+++.+|..
T Consensus 167 ~G~~vi~~~~s~~~~~~l~-~~Ga~~vi~~~~-~~~~~~v~~~~~~gvd~vld~~g~~~~~~~~~~l~~~G~iv~~g~~~ 244 (329)
T cd08294 167 KGCKVIGCAGSDDKVAWLK-ELGFDAVFNYKT-VSLEEALKEAAPDGIDCYFDNVGGEFSSTVLSHMNDFGRVAVCGSIS 244 (329)
T ss_pred cCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCC-ccHHHHHHHHCCCCcEEEEECCCHHHHHHHHHhhccCCEEEEEcchh
Confidence 4889999999999999998 899999999987 677665532 788888751
Q ss_pred --CCCCC---CCC--cceeccc------------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccce
Q 039636 52 --KHETP---REN--CSMWNDL------------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGK 112 (129)
Q Consensus 52 --~~~~~---~~~--~l~~~~~------------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gk 112 (129)
..... ... .++.++. ...+.++++++++.+|.+++.+..+++++++.+|++.+.+++..||
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gk 324 (329)
T cd08294 245 TYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYREHVTEGFENMPQAFIGMLKGENTGK 324 (329)
T ss_pred ccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCCcccccCHHHHHHHHHHHHcCCCCCe
Confidence 11000 000 1111111 1245678899999999999876667899999999999999999999
Q ss_pred EEEEe
Q 039636 113 QALDL 117 (129)
Q Consensus 113 vvv~~ 117 (129)
+|+++
T Consensus 325 vvv~~ 329 (329)
T cd08294 325 AIVKV 329 (329)
T ss_pred EEEeC
Confidence 99864
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.2e-11 Score=88.05 Aligned_cols=116 Identities=52% Similarity=0.886 Sum_probs=84.5
Q ss_pred CCcEEEEEeCChHHHHHHHHh-cCCCEEEeCCCcccHHHHhcc----------------------------ccEEEecCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNK-FAFDDAFNYKEEQDLVTALKR----------------------------GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~-lGad~vi~~~~~~~~~~~v~~----------------------------G~~v~~G~~ 51 (129)
+|++|+++++++++.+.++ + +|+++++++++..++.+.+++ |+++.+|..
T Consensus 175 ~G~~Vi~~~~~~~~~~~~~-~~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~ 253 (338)
T cd08295 175 KGCYVVGSAGSDEKVDLLK-NKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGKMLDAVLLNMNLHGRIAACGMI 253 (338)
T ss_pred cCCEEEEEeCCHHHHHHHH-HhcCCceeEEcCCcccHHHHHHHhCCCCcEEEEECCCHHHHHHHHHHhccCcEEEEeccc
Confidence 5899999999999999998 6 999999997641355554432 888888762
Q ss_pred CCCCC-----CCC--cceeccc------------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccce
Q 039636 52 KHETP-----REN--CSMWNDL------------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGK 112 (129)
Q Consensus 52 ~~~~~-----~~~--~l~~~~~------------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gk 112 (129)
+.... ..+ .++.++. ...+.++++++++.+|.+++.+..+|+|+++.+|++.+.+++..||
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~Gk 333 (338)
T cd08295 254 SQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYVEDIADGLESAPEAFVGLFTGSNIGK 333 (338)
T ss_pred ccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEceeecccCHHHHHHHHHHHhcCCCCce
Confidence 21100 000 1111110 1245678899999999999887777999999999999999999999
Q ss_pred EEEEe
Q 039636 113 QALDL 117 (129)
Q Consensus 113 vvv~~ 117 (129)
+|+++
T Consensus 334 vVl~~ 338 (338)
T cd08295 334 QVVKV 338 (338)
T ss_pred EEEEC
Confidence 99874
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.9e-11 Score=89.94 Aligned_cols=115 Identities=30% Similarity=0.359 Sum_probs=83.4
Q ss_pred CcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc----------------------------ccEEEecCCCC
Q 039636 2 GCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR----------------------------GQNARCSASKH 53 (129)
Q Consensus 2 Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~----------------------------G~~v~~G~~~~ 53 (129)
|+.++.+++++++.++++ ++|||+++||++ +++.+.+++ |+...++....
T Consensus 182 ~~~~v~t~~s~e~~~l~k-~lGAd~vvdy~~-~~~~e~~kk~~~~~~DvVlD~vg~~~~~~~~~~l~~~g~~~~i~~~~~ 259 (347)
T KOG1198|consen 182 GAIKVVTACSKEKLELVK-KLGADEVVDYKD-ENVVELIKKYTGKGVDVVLDCVGGSTLTKSLSCLLKGGGGAYIGLVGD 259 (347)
T ss_pred CCcEEEEEcccchHHHHH-HcCCcEeecCCC-HHHHHHHHhhcCCCccEEEECCCCCccccchhhhccCCceEEEEeccc
Confidence 444455666788899998 999999999999 888888776 22222211000
Q ss_pred CCCC-CCc---------------ceeccc------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccc
Q 039636 54 ETPR-ENC---------------SMWNDL------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVG 111 (129)
Q Consensus 54 ~~~~-~~~---------------l~~~~~------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~G 111 (129)
.... +.. +..... ...+.++.+.++++.|.|+|.+..+||++++.+|++.+.++...|
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~gkikp~i~~~~p~~~~~ea~~~~~~~~~~G 339 (347)
T KOG1198|consen 260 ELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKALVELIEKGKIKPVIDSVYPFSQAKEAFEKLEKSHATG 339 (347)
T ss_pred cccccccccchhhhhhhhheeeeeeccceeeeeecCCHHHHHHHHHHHHcCcccCCcceeeeHHHHHHHHHHHhhcCCcc
Confidence 0000 000 000000 568889999999999999999999999999999999999999999
Q ss_pred eEEEEeC
Q 039636 112 KQALDLD 118 (129)
Q Consensus 112 kvvv~~~ 118 (129)
|+++.+.
T Consensus 340 K~vl~~~ 346 (347)
T KOG1198|consen 340 KVVLEKD 346 (347)
T ss_pred eEEEEec
Confidence 9999875
|
|
| >PLN02178 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.31 E-value=3.9e-11 Score=89.21 Aligned_cols=115 Identities=17% Similarity=0.087 Sum_probs=79.7
Q ss_pred CCcEEEEEeCChHH-HHHHHHhcCCCEEEeCCCcccHHHH--------------------h---cc-ccEEEecCCCCCC
Q 039636 1 MGCYVVGSAGSKEK-IERLKNKFAFDDAFNYKEEQDLVTA--------------------L---KR-GQNARCSASKHET 55 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k-~~~~~~~lGad~vi~~~~~~~~~~~--------------------v---~~-G~~v~~G~~~~~~ 55 (129)
+|++|++++.++++ .++++ ++|+++++++++...+.+. + +. |+++.+|......
T Consensus 201 ~Ga~Vi~~~~~~~~~~~~a~-~lGa~~~i~~~~~~~v~~~~~~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~~ 279 (375)
T PLN02178 201 FGLRVTVISRSSEKEREAID-RLGADSFLVTTDSQKMKEAVGTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPL 279 (375)
T ss_pred cCCeEEEEeCChHHhHHHHH-hCCCcEEEcCcCHHHHHHhhCCCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCCC
Confidence 48899999877655 56776 8999999987541111111 0 00 8888888632211
Q ss_pred C-CCCcceeccc-------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEEe
Q 039636 56 P-RENCSMWNDL-------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDL 117 (129)
Q Consensus 56 ~-~~~~l~~~~~-------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~ 117 (129)
. ....++.++. ...+.+.++++++.+|.|++.+. +|||+++++||+.+.+++..||+|+.+
T Consensus 280 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~~i~-~~~l~~~~~A~~~~~~~~~~gkvvi~~ 348 (375)
T PLN02178 280 DLPIFPLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSDIE-LIKMSDINSAMDRLAKSDVRYRFVIDV 348 (375)
T ss_pred ccCHHHHHhCCeEEEEeCccCHHHHHHHHHHHHhCCCcccEE-EEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence 1 1111222211 23467899999999999998874 599999999999999999999999998
|
|
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=99.30 E-value=4.8e-11 Score=86.66 Aligned_cols=115 Identities=43% Similarity=0.719 Sum_probs=83.5
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc----------------------------ccEEEecCCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR----------------------------GQNARCSASK 52 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~----------------------------G~~v~~G~~~ 52 (129)
+|++|+++++++++.++++ ++|+++++++++..++.+.++. |+++.+|..+
T Consensus 162 ~G~~Vi~~~~s~~~~~~~~-~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G~~~~~~~~~~l~~~G~iv~~G~~~ 240 (325)
T TIGR02825 162 KGCKVVGAAGSDEKVAYLK-KLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAIS 240 (325)
T ss_pred cCCEEEEEeCCHHHHHHHH-HcCCCEEEeccccccHHHHHHHhCCCCeEEEEECCCHHHHHHHHHHhCcCcEEEEecchh
Confidence 4889999999999999998 8999999998751244433321 8888887621
Q ss_pred C-----CCCC-C-C-cceeccc-------------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccc
Q 039636 53 H-----ETPR-E-N-CSMWNDL-------------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVG 111 (129)
Q Consensus 53 ~-----~~~~-~-~-~l~~~~~-------------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~G 111 (129)
. ..+. . . .++.+.. ...+.++++++++.+|.+++.+..+++|+++.+|++.+.+++..|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~g 320 (325)
T TIGR02825 241 TYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYKEYVIEGFENMPAAFMGMLKGENLG 320 (325)
T ss_pred hcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccceeccccHHHHHHHHHHHhcCCCCC
Confidence 1 0110 0 0 1111110 124578899999999999988777799999999999999999999
Q ss_pred eEEEE
Q 039636 112 KQALD 116 (129)
Q Consensus 112 kvvv~ 116 (129)
|+|++
T Consensus 321 kvVv~ 325 (325)
T TIGR02825 321 KTIVK 325 (325)
T ss_pred eEEeC
Confidence 99974
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.29 E-value=3.5e-11 Score=87.90 Aligned_cols=113 Identities=19% Similarity=0.098 Sum_probs=79.3
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcc-c--------------HHHHh---cc-ccEEEecCCCCCCCC--CC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQ-D--------------LVTAL---KR-GQNARCSASKHETPR--EN 59 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~-~--------------~~~~v---~~-G~~v~~G~~~~~~~~--~~ 59 (129)
+|++|++++++++|+++++ ++|+++++|+.+.. . +...+ +. |+++.+|......+. ..
T Consensus 188 ~G~~vi~~~~~~~~~~~a~-~~Ga~~vi~~~~~~~~~~d~~i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~ 266 (329)
T TIGR02822 188 QGATVHVMTRGAAARRLAL-ALGAASAGGAYDTPPEPLDAAILFAPAGGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQ 266 (329)
T ss_pred CCCeEEEEeCChHHHHHHH-HhCCceeccccccCcccceEEEECCCcHHHHHHHHHhhCCCcEEEEEeccCccCCCCCHH
Confidence 4889999999999999998 99999999853200 0 01111 11 999998862111111 11
Q ss_pred cceeccc-------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEE
Q 039636 60 CSMWNDL-------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQAL 115 (129)
Q Consensus 60 ~l~~~~~-------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv 115 (129)
.++.+.. .....+.++++++.+|.+++. ..+|+|+++++||+.+.+++..||+||
T Consensus 267 ~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~i-~~~~~l~~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 267 RHLFYERQIRSVTSNTRADAREFLELAAQHGVRVT-THTYPLSEADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred HHhhCCcEEEEeecCCHHHHHHHHHHHHhCCCeeE-EEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence 1222211 335567889999999999865 456899999999999999999999987
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized. |
| >cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Probab=99.27 E-value=6.4e-11 Score=86.40 Aligned_cols=113 Identities=20% Similarity=0.219 Sum_probs=80.3
Q ss_pred CCcE-EEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc------------------------------ccEEEec
Q 039636 1 MGCY-VVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------------------GQNARCS 49 (129)
Q Consensus 1 ~Ga~-Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~------------------------------G~~v~~G 49 (129)
+|++ |++++++++|.++++ ++|+++++++++ .+ .+.+.+ |+++.+|
T Consensus 186 ~G~~~vi~~~~~~~~~~~~~-~~ga~~~i~~~~-~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g 262 (339)
T cd08239 186 LGAEDVIGVDPSPERLELAK-ALGADFVINSGQ-DD-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVG 262 (339)
T ss_pred cCCCEEEEECCCHHHHHHHH-HhCCCEEEcCCc-ch-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEc
Confidence 4787 999999999999997 999999998875 43 333321 7787777
Q ss_pred CCCCCCCCC-Ccceeccc-------chHHHHHHHHHHHHcCCcee--eeeeecCcccHHHHHHHHHcCCccceEEEEe
Q 039636 50 ASKHETPRE-NCSMWNDL-------TYSKFLDVVLPLIREGKIVY--VEDIVEGLENAPAALLGLFSGRNVGKQALDL 117 (129)
Q Consensus 50 ~~~~~~~~~-~~l~~~~~-------~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~ 117 (129)
......... ..++.++. ...+.++++++++.+|.+.+ .+..+|+|+++++||+.+.+++ .||+||++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~ 339 (339)
T cd08239 263 EGGELTIEVSNDLIRKQRTLIGSWYFSVPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGE-SGKVVFVF 339 (339)
T ss_pred CCCCcccCcHHHHHhCCCEEEEEecCCHHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence 622111111 12222222 23567899999999999875 4555689999999999998875 79999875
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at |
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.5e-10 Score=84.56 Aligned_cols=116 Identities=31% Similarity=0.563 Sum_probs=84.2
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc----------------------------ccEEEecCC
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR----------------------------GQNARCSAS 51 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~----------------------------G~~v~~G~~ 51 (129)
+|+ +||++++++++.+.+++++|+++++++++ .++.+.+++ |+++.+|..
T Consensus 178 ~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~-~~~~~~i~~~~~~gvd~vid~~g~~~~~~~~~~l~~~G~iv~~G~~ 256 (345)
T cd08293 178 LGCSRVVGICGSDEKCQLLKSELGFDAAINYKT-DNVAERLRELCPEGVDVYFDNVGGEISDTVISQMNENSHIILCGQI 256 (345)
T ss_pred cCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCC-CCHHHHHHHHCCCCceEEEECCCcHHHHHHHHHhccCCEEEEEeee
Confidence 488 89999999999998874499999999887 667665542 888888741
Q ss_pred C---CC-C--CCC---------C-cceeccc-------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCC
Q 039636 52 K---HE-T--PRE---------N-CSMWNDL-------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGR 108 (129)
Q Consensus 52 ~---~~-~--~~~---------~-~l~~~~~-------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~ 108 (129)
+ .. . +.. . .+..... ...+.++++++++.+|.+++....+++++++.+||+.+.+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~ 336 (345)
T cd08293 257 SQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLKVKETVYEGLENAGEAFQSMMNGG 336 (345)
T ss_pred ecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCCccceeEEeecHHHHHHHHHHHhcCC
Confidence 1 10 0 000 0 0000000 234567888999999999987666679999999999999999
Q ss_pred ccceEEEEe
Q 039636 109 NVGKQALDL 117 (129)
Q Consensus 109 ~~Gkvvv~~ 117 (129)
..||+|+++
T Consensus 337 ~~gkvvl~~ 345 (345)
T cd08293 337 NIGKQIVKV 345 (345)
T ss_pred CCCeEEEEC
Confidence 999999874
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) | Back alignment and domain information |
|---|
Probab=99.25 E-value=8.1e-11 Score=87.15 Aligned_cols=113 Identities=14% Similarity=0.135 Sum_probs=81.9
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecC
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSA 50 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~ 50 (129)
+|+ +|++++.+++|+++++ ++|+++++++.+ +++.+.+++ |+++.+|.
T Consensus 214 ~G~~~Vi~~~~~~~r~~~a~-~~Ga~~~i~~~~-~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~ 291 (371)
T cd08281 214 AGASQVVAVDLNEDKLALAR-ELGATATVNAGD-PNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGL 291 (371)
T ss_pred cCCCcEEEEcCCHHHHHHHH-HcCCceEeCCCc-hhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEcc
Confidence 478 6999999999999997 999999999876 666555442 78888876
Q ss_pred CCCC-CCCCC--cceeccc----------chHHHHHHHHHHHHcCCceee--eeeecCcccHHHHHHHHHcCCccceEEE
Q 039636 51 SKHE-TPREN--CSMWNDL----------TYSKFLDVVLPLIREGKIVYV--EDIVEGLENAPAALLGLFSGRNVGKQAL 115 (129)
Q Consensus 51 ~~~~-~~~~~--~l~~~~~----------~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~Gkvvv 115 (129)
.... ....+ .++.++. ...+.+.++++++.+|++++. +..+|+|+++++||+.+.+++..||+|+
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~ 371 (371)
T cd08281 292 PDPEARLSVPALSLVAEERTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL 371 (371)
T ss_pred CCCCceeeecHHHHhhcCCEEEEEecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 2211 11101 1222221 124678889999999999763 4556899999999999999999888764
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd |
| >PLN02514 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.22 E-value=3.2e-10 Score=83.62 Aligned_cols=119 Identities=17% Similarity=0.111 Sum_probs=80.8
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHH--------------------h---cc-ccEEEecCCCCCCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTA--------------------L---KR-GQNARCSASKHETP 56 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~--------------------v---~~-G~~v~~G~~~~~~~ 56 (129)
+|++||+++++++++..+.+++|+++++++.+...+.+. + +. |+++.+|.......
T Consensus 203 ~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~ 282 (357)
T PLN02514 203 MGHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQEAADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQ 282 (357)
T ss_pred CCCeEEEEeCCHHHHHHHHHhcCCcEEecCCChHHHHHhcCCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCCCc
Confidence 478899998888877666547999888776431111110 0 00 88888886321111
Q ss_pred C-CCcceeccc-------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEEeCCC
Q 039636 57 R-ENCSMWNDL-------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDLDSC 120 (129)
Q Consensus 57 ~-~~~l~~~~~-------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~~~~ 120 (129)
. ...++.++. .....+.++++++.+|.+++.+. +|+|+++.+||+.+.+++..||+|+.++..
T Consensus 283 ~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~l~~~i~-~~~l~~~~~A~~~~~~~~~~gk~v~~~~~~ 353 (357)
T PLN02514 283 FVTPMLMLGRKVITGSFIGSMKETEEMLEFCKEKGLTSMIE-VVKMDYVNTAFERLEKNDVRYRFVVDVAGS 353 (357)
T ss_pred ccHHHHhhCCcEEEEEecCCHHHHHHHHHHHHhCCCcCcEE-EEcHHHHHHHHHHHHcCCCceeEEEEcccc
Confidence 0 112222221 33456899999999999988775 699999999999999999899999998643
|
|
| >PLN02586 probable cinnamyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.21 E-value=2.4e-10 Score=84.47 Aligned_cols=114 Identities=12% Similarity=0.061 Sum_probs=78.0
Q ss_pred CCcEEEEEeCChHHHH-HHHHhcCCCEEEeCCCccc-HHH--------------------Hh---cc-ccEEEecCCCCC
Q 039636 1 MGCYVVGSAGSKEKIE-RLKNKFAFDDAFNYKEEQD-LVT--------------------AL---KR-GQNARCSASKHE 54 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~-~~~~~lGad~vi~~~~~~~-~~~--------------------~v---~~-G~~v~~G~~~~~ 54 (129)
+|++|++++.++++.. .++ ++|+++++++++ .+ +.+ .+ +. |+++.+|.....
T Consensus 206 ~Ga~vi~~~~~~~~~~~~~~-~~Ga~~vi~~~~-~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~ 283 (360)
T PLN02586 206 FGLKVTVISSSSNKEDEAIN-RLGADSFLVSTD-PEKMKAAIGTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKP 283 (360)
T ss_pred CCCEEEEEeCCcchhhhHHH-hCCCcEEEcCCC-HHHHHhhcCCCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCC
Confidence 4888988887776654 445 899999988654 21 111 11 01 888888863211
Q ss_pred CC-CCCcceeccc-------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEEe
Q 039636 55 TP-RENCSMWNDL-------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDL 117 (129)
Q Consensus 55 ~~-~~~~l~~~~~-------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~ 117 (129)
.. ....++.++. ...+.++++++++.+|.|++.+. +|+|+++++||+.+.+++..||+|+++
T Consensus 284 ~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~li~~g~i~~~~~-~~~l~~~~~A~~~~~~~~~~gkvvi~~ 353 (360)
T PLN02586 284 LELPIFPLVLGRKLVGGSDIGGIKETQEMLDFCAKHNITADIE-LIRMDEINTAMERLAKSDVRYRFVIDV 353 (360)
T ss_pred CccCHHHHHhCCeEEEEcCcCCHHHHHHHHHHHHhCCCCCcEE-EEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 11 1111221111 23457899999999999998764 699999999999999999899999987
|
|
| >COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.1e-10 Score=84.55 Aligned_cols=113 Identities=19% Similarity=0.209 Sum_probs=81.8
Q ss_pred Cc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCC
Q 039636 2 GC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSAS 51 (129)
Q Consensus 2 Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~ 51 (129)
|| ++||++.+++|+++++ +|||.+++|.++..++.+.+.+ |+.+.+|..
T Consensus 209 gA~~IiAvD~~~~Kl~~A~-~fGAT~~vn~~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~ 287 (366)
T COG1062 209 GAGRIIAVDINPEKLELAK-KFGATHFVNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVA 287 (366)
T ss_pred CCceEEEEeCCHHHHHHHH-hcCCceeecchhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecC
Confidence 67 7999999999999998 9999999998872257766665 777777762
Q ss_pred CCCC--CCCC-cceeccc---------chHHHHHHHHHHHHcCCceeeeee--ecCcccHHHHHHHHHcCCccceEEEE
Q 039636 52 KHET--PREN-CSMWNDL---------TYSKFLDVVLPLIREGKIVYVEDI--VEGLENAPAALLGLFSGRNVGKQALD 116 (129)
Q Consensus 52 ~~~~--~~~~-~l~~~~~---------~~~~~~~~~~~~~~~g~i~~~~~~--~~~l~~~~~a~~~~~~~~~~Gkvvv~ 116 (129)
+... +.+. .+...+. .-+.++.++++|+.+|+|.....+ +++|+++++||+.|.+|+.. |-||.
T Consensus 288 ~~~~~i~~~~~~lv~gr~~~Gs~~G~~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi~ 365 (366)
T COG1062 288 GAGQEISTRPFQLVTGRVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVIR 365 (366)
T ss_pred CCCceeecChHHeeccceEEEEeecCCccccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEec
Confidence 2211 1111 2222211 335578999999999999776554 47999999999999998875 44443
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.8e-10 Score=93.96 Aligned_cols=120 Identities=18% Similarity=0.227 Sum_probs=86.7
Q ss_pred CCcEEEEEeCChHHHHHHHHhcC---CCEEEeCCCcccHHHHhcc-----------------------------ccEEEe
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFA---FDDAFNYKEEQDLVTALKR-----------------------------GQNARC 48 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lG---ad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~ 48 (129)
.|++|+.|++|.+|++++.+.|. ..++-|+++ .+|...++. ||+..+
T Consensus 1576 ~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRd-tsFEq~vl~~T~GrGVdlVLNSLaeEkLQASiRCLa~~GRFLEI 1654 (2376)
T KOG1202|consen 1576 HGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRD-TSFEQHVLWHTKGRGVDLVLNSLAEEKLQASIRCLALHGRFLEI 1654 (2376)
T ss_pred cCCEEEEecCcHHHHHHHHHhchhhhhhccccccc-ccHHHHHHHHhcCCCeeeehhhhhHHHHHHHHHHHHhcCeeeee
Confidence 48999999999999999986664 367778887 778877765 999999
Q ss_pred cCC---CCCCCC-----CC----cceeccc--chHHHHHHHHHHH----HcCCceeeeeeecCcccHHHHHHHHHcCCcc
Q 039636 49 SAS---KHETPR-----EN----CSMWNDL--TYSKFLDVVLPLI----REGKIVYVEDIVEGLENAPAALLGLFSGRNV 110 (129)
Q Consensus 49 G~~---~~~~~~-----~~----~l~~~~~--~~~~~~~~~~~~~----~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~ 110 (129)
|-+ +.++.. +| -++.... ...+.|.+++.++ ++|.++|....+|+-.++++||+.|.+|++.
T Consensus 1655 GKfDLSqNspLGMavfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHI 1734 (2376)
T KOG1202|consen 1655 GKFDLSQNSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHI 1734 (2376)
T ss_pred cceecccCCcchhhhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHhccCcc
Confidence 862 222211 22 1111111 3344555555555 5678888888779999999999999999999
Q ss_pred ceEEEEeCCCc
Q 039636 111 GKQALDLDSCL 121 (129)
Q Consensus 111 Gkvvv~~~~~~ 121 (129)
||+|+++.++.
T Consensus 1735 GKVvikvr~eE 1745 (2376)
T KOG1202|consen 1735 GKVVIKVRAEE 1745 (2376)
T ss_pred ceEEEEEcccc
Confidence 99999996543
|
|
| >TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.17 E-value=5.8e-10 Score=82.20 Aligned_cols=113 Identities=14% Similarity=0.192 Sum_probs=80.6
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc------------------------------ccEEEec
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------------------GQNARCS 49 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~------------------------------G~~v~~G 49 (129)
+|+ +|++++++++++++++ ++|+++++++++ +++.+.+.+ |+++.+|
T Consensus 199 ~G~~~Vi~~~~~~~~~~~~~-~~Ga~~~i~~~~-~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G 276 (358)
T TIGR03451 199 AGASKIIAVDIDDRKLEWAR-EFGATHTVNSSG-TDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVG 276 (358)
T ss_pred cCCCeEEEEcCCHHHHHHHH-HcCCceEEcCCC-cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEC
Confidence 477 5999999999999997 999999999876 566555443 8888887
Q ss_pred CCCCC-CCCCC--cceeccc----------chHHHHHHHHHHHHcCCcee--eeeeecCcccHHHHHHHHHcCCccceEE
Q 039636 50 ASKHE-TPREN--CSMWNDL----------TYSKFLDVVLPLIREGKIVY--VEDIVEGLENAPAALLGLFSGRNVGKQA 114 (129)
Q Consensus 50 ~~~~~-~~~~~--~l~~~~~----------~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~Gkvv 114 (129)
..... ....+ .++.++. ...+.++++++++.+|.+++ .+..+|||+++.+||+.+++++.. |++
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~ 355 (358)
T TIGR03451 277 VPTPDMTLELPLLDVFGRGGALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSV 355 (358)
T ss_pred CCCCCceeeccHHHHhhcCCEEEEeecCCCCcHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeE
Confidence 62211 10000 1111111 13567889999999999976 355668999999999999988765 777
Q ss_pred EE
Q 039636 115 LD 116 (129)
Q Consensus 115 v~ 116 (129)
|.
T Consensus 356 ~~ 357 (358)
T TIGR03451 356 VE 357 (358)
T ss_pred Ee
Confidence 64
|
Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione. |
| >PRK10309 galactitol-1-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=4.8e-10 Score=82.18 Aligned_cols=114 Identities=18% Similarity=0.177 Sum_probs=79.8
Q ss_pred CCcE-EEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-------------------------------ccEEEe
Q 039636 1 MGCY-VVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-------------------------------GQNARC 48 (129)
Q Consensus 1 ~Ga~-Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-------------------------------G~~v~~ 48 (129)
+|++ |+++++++++.++++ ++|+++++++++ .+. +.+.+ |+++.+
T Consensus 183 ~G~~~v~~~~~~~~~~~~~~-~~Ga~~~i~~~~-~~~-~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~ 259 (347)
T PRK10309 183 LGAKSVTAIDINSEKLALAK-SLGAMQTFNSRE-MSA-PQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPRAQLALV 259 (347)
T ss_pred cCCCeEEEECCCHHHHHHHH-HcCCceEecCcc-cCH-HHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEE
Confidence 4775 788889999999987 899999998765 331 11111 788888
Q ss_pred cCCCCCC-CC-C--Ccceeccc-------c-----hHHHHHHHHHHHHcCCce--eeeeeecCcccHHHHHHHHHcCCcc
Q 039636 49 SASKHET-PR-E--NCSMWNDL-------T-----YSKFLDVVLPLIREGKIV--YVEDIVEGLENAPAALLGLFSGRNV 110 (129)
Q Consensus 49 G~~~~~~-~~-~--~~l~~~~~-------~-----~~~~~~~~~~~~~~g~i~--~~~~~~~~l~~~~~a~~~~~~~~~~ 110 (129)
|...... .. . +.++.++. . ..+.++++++++.+|.+. +.+..+|+|+++++||+.+.+++..
T Consensus 260 G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~ 339 (347)
T PRK10309 260 GTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMP 339 (347)
T ss_pred ccCCCCcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcc
Confidence 7632211 00 0 01222211 0 146789999999999985 4556668999999999999999889
Q ss_pred ceEEEEe
Q 039636 111 GKQALDL 117 (129)
Q Consensus 111 Gkvvv~~ 117 (129)
||+|+++
T Consensus 340 gKvvv~~ 346 (347)
T PRK10309 340 GKVLLQI 346 (347)
T ss_pred eEEEEeC
Confidence 9999975
|
|
| >TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.16 E-value=5.7e-10 Score=81.96 Aligned_cols=114 Identities=21% Similarity=0.174 Sum_probs=79.2
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcc---cHHHHhcc----------------------------------c
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQ---DLVTALKR----------------------------------G 43 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~---~~~~~v~~----------------------------------G 43 (129)
+|++|++++++++++++++ ++|+++++++.+ . ++.+.+++ |
T Consensus 189 ~G~~vi~~~~~~~~~~~~~-~~Ga~~~i~~~~-~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G 266 (349)
T TIGR03201 189 MGAAVVAIDIDPEKLEMMK-GFGADLTLNPKD-KSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHGG 266 (349)
T ss_pred cCCeEEEEcCCHHHHHHHH-HhCCceEecCcc-ccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcCC
Confidence 4789999999999999997 899999998765 2 23332211 7
Q ss_pred cEEEecCCCCCCC-CCCcceeccc-------chHHHHHHHHHHHHcCCceeee-eeecCcccHHHHHHHHHcCCccceEE
Q 039636 44 QNARCSASKHETP-RENCSMWNDL-------TYSKFLDVVLPLIREGKIVYVE-DIVEGLENAPAALLGLFSGRNVGKQA 114 (129)
Q Consensus 44 ~~v~~G~~~~~~~-~~~~l~~~~~-------~~~~~~~~~~~~~~~g~i~~~~-~~~~~l~~~~~a~~~~~~~~~~Gkvv 114 (129)
+++.+|....... ....++.... .....+.++++++.+|.|++.. ..+|+|+++++||+.+.+++..||++
T Consensus 267 ~iv~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~g~i~~~~~i~~~~l~~~~~A~~~~~~~~~~~k~~ 346 (349)
T TIGR03201 267 TLVVVGYTMAKTEYRLSNLMAFHARALGNWGCPPDRYPAALDLVLDGKIQLGPFVERRPLDQIEHVFAAAHHHKLKRRAI 346 (349)
T ss_pred eEEEECcCCCCcccCHHHHhhcccEEEEEecCCHHHHHHHHHHHHcCCCCcccceEEecHHHHHHHHHHHHcCCccceEE
Confidence 7777775221111 0001221111 2345789999999999997632 23589999999999999999999998
Q ss_pred EE
Q 039636 115 LD 116 (129)
Q Consensus 115 v~ 116 (129)
++
T Consensus 347 ~~ 348 (349)
T TIGR03201 347 LT 348 (349)
T ss_pred ec
Confidence 85
|
Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. |
| >cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.14 E-value=5e-10 Score=82.13 Aligned_cols=114 Identities=15% Similarity=0.153 Sum_probs=81.3
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc------------------------------ccEEEec
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------------------GQNARCS 49 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~------------------------------G~~v~~G 49 (129)
+|+ +|+++++++++.++++ ++|++.++++++ .++.+.+++ |+++.+|
T Consensus 195 ~G~~~v~~~~~~~~~~~~~~-~~ga~~~i~~~~-~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g 272 (351)
T cd08233 195 AGASKIIVSEPSEARRELAE-ELGATIVLDPTE-VDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVA 272 (351)
T ss_pred cCCCEEEEECCCHHHHHHHH-HhCCCEEECCCc-cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEc
Confidence 478 7999999999999997 899999999887 666655543 6777776
Q ss_pred CCCCCCCCCC-cceeccc-------chHHHHHHHHHHHHcCCcee--eeeeecCcccH-HHHHHHHHcCCcc-ceEEEE
Q 039636 50 ASKHETPREN-CSMWNDL-------TYSKFLDVVLPLIREGKIVY--VEDIVEGLENA-PAALLGLFSGRNV-GKQALD 116 (129)
Q Consensus 50 ~~~~~~~~~~-~l~~~~~-------~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~-~~a~~~~~~~~~~-Gkvvv~ 116 (129)
.......... .++.+.. ...+.++++++++.+|.|++ .+..+|+|+++ ++||+.+.+++.. ||+||.
T Consensus 273 ~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~~ 351 (351)
T cd08233 273 IWEKPISFNPNDLVLKEKTLTGSICYTREDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILVS 351 (351)
T ss_pred cCCCCCccCHHHHHhhCcEEEEEeccCcchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEeC
Confidence 5221111000 1222211 23567899999999999964 45566899996 7999999999875 999873
|
(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. |
| >cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.1e-09 Score=79.78 Aligned_cols=113 Identities=16% Similarity=0.106 Sum_probs=81.5
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc---------------------------ccEEEecCCCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR---------------------------GQNARCSASKH 53 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~---------------------------G~~v~~G~~~~ 53 (129)
+|++|+++++++++.+.++ ++|+++++++.+ .++.+.+++ |+++.+|..+.
T Consensus 186 ~G~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~-~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 263 (333)
T cd08296 186 MGFRTVAISRGSDKADLAR-KLGAHHYIDTSK-EDVAEALQELGGAKLILATAPNAKAISALVGGLAPRGKLLILGAAGE 263 (333)
T ss_pred CCCeEEEEeCChHHHHHHH-HcCCcEEecCCC-ccHHHHHHhcCCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCC
Confidence 4889999999999999997 999999998876 555444332 67777765221
Q ss_pred CCCCC-Ccceeccc-------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEE
Q 039636 54 ETPRE-NCSMWNDL-------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALD 116 (129)
Q Consensus 54 ~~~~~-~~l~~~~~-------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~ 116 (129)
..+.. ..++.+.. .....++++++++.++.+++.+. +++++++.+|++.+.+++.+||+|++
T Consensus 264 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~v~-~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 264 PVAVSPLQLIMGRKSIHGWPSGTALDSEDTLKFSALHGVRPMVE-TFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred CCCcCHHHHhhcccEEEEeCcCCHHHHHHHHHHHHhCCCCceEE-EEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 11100 01112221 33466788899999999987654 58999999999999999999999874
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal |
| >PLN02827 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.8e-09 Score=80.31 Aligned_cols=116 Identities=15% Similarity=0.152 Sum_probs=80.8
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCc-ccHHHHhcc------------------------------ccEEEe
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEE-QDLVTALKR------------------------------GQNARC 48 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~-~~~~~~v~~------------------------------G~~v~~ 48 (129)
+|+ .|++++++++|.++++ ++|+++++++++. +++.+.+++ |+++.+
T Consensus 216 ~G~~~vi~~~~~~~~~~~a~-~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~ 294 (378)
T PLN02827 216 RGASQIIGVDINPEKAEKAK-TFGVTDFINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTL 294 (378)
T ss_pred cCCCeEEEECCCHHHHHHHH-HcCCcEEEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEE
Confidence 477 5888888999999997 9999999987641 244444332 577777
Q ss_pred cCCCCCCC-CC-Ccceeccc----------chHHHHHHHHHHHHcCCcee--eeeeecCcccHHHHHHHHHcCCccceEE
Q 039636 49 SASKHETP-RE-NCSMWNDL----------TYSKFLDVVLPLIREGKIVY--VEDIVEGLENAPAALLGLFSGRNVGKQA 114 (129)
Q Consensus 49 G~~~~~~~-~~-~~l~~~~~----------~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~Gkvv 114 (129)
|....... .. +.++.++. .....++++++++.+|.|++ .+..+|+|+++.+||+.+.+++. +|+|
T Consensus 295 G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~v 373 (378)
T PLN02827 295 GVPKAKPEVSAHYGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCV 373 (378)
T ss_pred CCcCCCccccccHHHHhcCceEEeeecCCCchhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEE
Confidence 76221111 01 11222221 12456789999999999988 56666899999999999998876 6999
Q ss_pred EEeC
Q 039636 115 LDLD 118 (129)
Q Consensus 115 v~~~ 118 (129)
|.+.
T Consensus 374 i~~~ 377 (378)
T PLN02827 374 IHMP 377 (378)
T ss_pred EEec
Confidence 9763
|
|
| >cd08300 alcohol_DH_class_III class III alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=99.00 E-value=7.3e-09 Score=76.66 Aligned_cols=114 Identities=16% Similarity=0.142 Sum_probs=78.4
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCcc-cHHHHhcc------------------------------ccEEEe
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEEQ-DLVTALKR------------------------------GQNARC 48 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~-~~~~~v~~------------------------------G~~v~~ 48 (129)
+|+ +|++++++++|+++++ ++|+++++|+++.+ ++.+.+.+ |+++.+
T Consensus 209 ~G~~~vi~~~~~~~~~~~~~-~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~ 287 (368)
T cd08300 209 AGASRIIGIDINPDKFELAK-KFGATDCVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVII 287 (368)
T ss_pred cCCCeEEEEeCCHHHHHHHH-HcCCCEEEcccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEE
Confidence 478 7999999999999997 99999999987511 34443322 677777
Q ss_pred cCCC-CCCCC-CC-cceec-c--------cchHHHHHHHHHHHHcCCceee--eeeecCcccHHHHHHHHHcCCccceEE
Q 039636 49 SASK-HETPR-EN-CSMWN-D--------LTYSKFLDVVLPLIREGKIVYV--EDIVEGLENAPAALLGLFSGRNVGKQA 114 (129)
Q Consensus 49 G~~~-~~~~~-~~-~l~~~-~--------~~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~Gkvv 114 (129)
|... ..... .. .++.. . ......+.++++++.+|.+++. +..+|+|+++++||+.+.+++. .|++
T Consensus 288 g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~ 366 (368)
T cd08300 288 GVAAAGQEISTRPFQLVTGRVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTV 366 (368)
T ss_pred ccCCCCCccccCHHHHhhcCeEEEEEecccCcHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceee
Confidence 7632 11111 00 11110 0 0235677889999999999864 5566899999999999988764 6888
Q ss_pred EE
Q 039636 115 LD 116 (129)
Q Consensus 115 v~ 116 (129)
++
T Consensus 367 ~~ 368 (368)
T cd08300 367 VK 368 (368)
T ss_pred eC
Confidence 74
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim |
| >KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.99 E-value=3.2e-09 Score=76.37 Aligned_cols=114 Identities=15% Similarity=0.128 Sum_probs=84.2
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCcc-cHHHHhcc------------------------------ccEEEe
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEEQ-DLVTALKR------------------------------GQNARC 48 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~-~~~~~v~~------------------------------G~~v~~ 48 (129)
.|| ++|+++.+++|.++++ +||+.+++|+++.. .+.+.+.+ |.-+.+
T Consensus 215 ~GAsrIIgvDiN~~Kf~~ak-~fGaTe~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~i 293 (375)
T KOG0022|consen 215 AGASRIIGVDINPDKFEKAK-EFGATEFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVI 293 (375)
T ss_pred cCcccEEEEecCHHHHHHHH-hcCcceecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEE
Confidence 477 8999999999999998 99999999987422 36667766 666777
Q ss_pred cCCCCCCC-C--CCcceeccc---------chHHHHHHHHHHHHcCCceeeeeee--cCcccHHHHHHHHHcCCccceEE
Q 039636 49 SASKHETP-R--ENCSMWNDL---------TYSKFLDVVLPLIREGKIVYVEDIV--EGLENAPAALLGLFSGRNVGKQA 114 (129)
Q Consensus 49 G~~~~~~~-~--~~~l~~~~~---------~~~~~~~~~~~~~~~g~i~~~~~~~--~~l~~~~~a~~~~~~~~~~Gkvv 114 (129)
|....... . ++.++..+. ..+..+..+++.+.++.++....++ .||+++++||+.|.+|+.. |.|
T Consensus 294 Gv~~~~~~i~~~p~~l~~GR~~~Gs~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~v 372 (375)
T KOG0022|consen 294 GVAAAGQEISTRPFQLVTGRTWKGSAFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCV 372 (375)
T ss_pred EecCCCcccccchhhhccccEEEEEecccccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEE
Confidence 76222111 1 223444332 4566788899999999987776655 5999999999999998877 777
Q ss_pred EE
Q 039636 115 LD 116 (129)
Q Consensus 115 v~ 116 (129)
+.
T Consensus 373 l~ 374 (375)
T KOG0022|consen 373 LW 374 (375)
T ss_pred Ee
Confidence 65
|
|
| >cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.3e-08 Score=74.24 Aligned_cols=114 Identities=21% Similarity=0.212 Sum_probs=81.8
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc------------------------------ccEEEecC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------------------GQNARCSA 50 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~------------------------------G~~v~~G~ 50 (129)
+|++|+++++++++.+.+. ++|+++++++++ .++.+.+.+ |+++.+|.
T Consensus 189 ~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~-~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~ 266 (341)
T cd08297 189 MGLRVIAIDVGDEKLELAK-ELGADAFVDFKK-SDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGL 266 (341)
T ss_pred CCCeEEEEeCCHHHHHHHH-HcCCcEEEcCCC-ccHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecC
Confidence 4789999999999999886 899999998876 455444332 66766664
Q ss_pred CCCCCCCCC--cceeccc-------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEEe
Q 039636 51 SKHETPREN--CSMWNDL-------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDL 117 (129)
Q Consensus 51 ~~~~~~~~~--~l~~~~~-------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~ 117 (129)
........+ .++.++. ...+.++++++++.++.+.+.+ ..+++++++++++.+..+...||+|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 267 PPGGFIPLDPFDLVLRGITIVGSLVGTRQDLQEALEFAARGKVKPHI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred CCCCCCCCCHHHHHhcccEEEEeccCCHHHHHHHHHHHHcCCCccee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 211110111 1112221 2257889999999999998755 3589999999999999999999999875
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha |
| >cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.4e-08 Score=73.37 Aligned_cols=114 Identities=13% Similarity=0.146 Sum_probs=81.5
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~ 51 (129)
+|++|+++++++++.+.++ ++|+++++++.+ .++.+.+.+ |+++.+|..
T Consensus 163 ~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~ 240 (324)
T cd08292 163 RGINVINLVRRDAGVAELR-ALGIGPVVSTEQ-PGWQDKVREAAGGAPISVALDSVGGKLAGELLSLLGEGGTLVSFGSM 240 (324)
T ss_pred CCCeEEEEecCHHHHHHHH-hcCCCEEEcCCC-chHHHHHHHHhCCCCCcEEEECCCChhHHHHHHhhcCCcEEEEEecC
Confidence 5889999999999988887 789999998876 566554433 778877752
Q ss_pred CCCCC--C------CC-cceecc---------c-chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccce
Q 039636 52 KHETP--R------EN-CSMWND---------L-TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGK 112 (129)
Q Consensus 52 ~~~~~--~------~~-~l~~~~---------~-~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gk 112 (129)
..... . .+ .+.... + ...+.++++++++.+|.+.+.+..+|+++++.+|++.+.++...||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~~k 320 (324)
T cd08292 241 SGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLPVEAVFDLGDAAKAAAASMRPGRAGK 320 (324)
T ss_pred CCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCccccEecHHHHHHHHHHHHcCCCCce
Confidence 11110 0 11 111100 0 1245788999999999998665556899999999999998888899
Q ss_pred EEEE
Q 039636 113 QALD 116 (129)
Q Consensus 113 vvv~ 116 (129)
++++
T Consensus 321 vvv~ 324 (324)
T cd08292 321 VLLR 324 (324)
T ss_pred EEeC
Confidence 9863
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina |
| >cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.3e-08 Score=76.44 Aligned_cols=113 Identities=19% Similarity=0.212 Sum_probs=76.6
Q ss_pred EEEEEeCChHHHHHHHHhc--------CCC-EEEeCCCcccHHHHhcc------------------------------cc
Q 039636 4 YVVGSAGSKEKIERLKNKF--------AFD-DAFNYKEEQDLVTALKR------------------------------GQ 44 (129)
Q Consensus 4 ~Vi~t~~s~~k~~~~~~~l--------Gad-~vi~~~~~~~~~~~v~~------------------------------G~ 44 (129)
+|++++.+++|++.++ ++ |++ +++++++.+++.+.+++ |+
T Consensus 205 ~Vi~~~~~~~r~~~a~-~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~ 283 (410)
T cd08238 205 LLVVTDVNDERLARAQ-RLFPPEAASRGIELLYVNPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGC 283 (410)
T ss_pred eEEEEcCCHHHHHHHH-HhccccccccCceEEEECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCe
Confidence 7999999999999998 76 776 57776531245444332 56
Q ss_pred EEEecC-CCCC-CCCCC--cceeccc-------chHHHHHHHHHHHHcCCceee--eeeecCcccHHHHHHHHHcCCccc
Q 039636 45 NARCSA-SKHE-TPREN--CSMWNDL-------TYSKFLDVVLPLIREGKIVYV--EDIVEGLENAPAALLGLFSGRNVG 111 (129)
Q Consensus 45 ~v~~G~-~~~~-~~~~~--~l~~~~~-------~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~G 111 (129)
++.++. .... ....+ .++.++. .....++++++++.+|+|++. +..+|+|+++++|++.+. ++..|
T Consensus 284 ~v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~g 362 (410)
T cd08238 284 LNFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGGNTDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGG 362 (410)
T ss_pred EEEEEccCCCCccccccHHHhhhcCcEEEEeCCCCHHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCc
Confidence 655533 1111 01101 1222221 345678999999999999883 455689999999999999 78889
Q ss_pred eEEEEeC
Q 039636 112 KQALDLD 118 (129)
Q Consensus 112 kvvv~~~ 118 (129)
|+||..+
T Consensus 363 Kvvl~~~ 369 (410)
T cd08238 363 KKLIYTQ 369 (410)
T ss_pred eEEEECC
Confidence 9999874
|
L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found |
| >PRK10083 putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.1e-08 Score=74.63 Aligned_cols=117 Identities=15% Similarity=0.085 Sum_probs=80.6
Q ss_pred CCcE-EEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc----------------------------ccEEEecCC
Q 039636 1 MGCY-VVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR----------------------------GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~-Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~----------------------------G~~v~~G~~ 51 (129)
+|+. |++++++++|.++++ ++|+++++++++ .++.+.+.. |+++.+|..
T Consensus 184 ~G~~~v~~~~~~~~~~~~~~-~~Ga~~~i~~~~-~~~~~~~~~~g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 261 (339)
T PRK10083 184 YNVKAVIVADRIDERLALAK-ESGADWVINNAQ-EPLGEALEEKGIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFS 261 (339)
T ss_pred CCCCEEEEEcCCHHHHHHHH-HhCCcEEecCcc-ccHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccC
Confidence 3884 777888888999987 999999998876 555554431 667766652
Q ss_pred CCCCC-CCCcceeccc------chHHHHHHHHHHHHcCCceee--eeeecCcccHHHHHHHHHcC-CccceEEEEeCC
Q 039636 52 KHETP-RENCSMWNDL------TYSKFLDVVLPLIREGKIVYV--EDIVEGLENAPAALLGLFSG-RNVGKQALDLDS 119 (129)
Q Consensus 52 ~~~~~-~~~~l~~~~~------~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~-~~~Gkvvv~~~~ 119 (129)
+.... ....+..+.. ...+.++++++++.+|.+++. +..+|+++++++|++.+.++ ...||+++.+.+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~ 339 (339)
T PRK10083 262 SEPSEIVQQGITGKELSIFSSRLNANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE 339 (339)
T ss_pred CCCceecHHHHhhcceEEEEEecChhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 11110 0001111111 235678999999999999873 45568999999999999865 456999998753
|
|
| >TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.3e-08 Score=75.47 Aligned_cols=115 Identities=12% Similarity=0.111 Sum_probs=77.9
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCC-cccHHHHhcc------------------------------ccEEEe
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKE-EQDLVTALKR------------------------------GQNARC 48 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~-~~~~~~~v~~------------------------------G~~v~~ 48 (129)
+|+ +|++++.+++|++.++ ++|+++++|+++ ..++.+.+++ |+++.+
T Consensus 208 ~G~~~Vi~~~~~~~~~~~a~-~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~ 286 (368)
T TIGR02818 208 AKASRIIAIDINPAKFELAK-KLGATDCVNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIII 286 (368)
T ss_pred cCCCeEEEEcCCHHHHHHHH-HhCCCeEEcccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEE
Confidence 478 7999999999999997 999999998763 1233333321 677777
Q ss_pred cCCCC-CCCCCC--cceecc-c--------chHHHHHHHHHHHHcCCcee--eeeeecCcccHHHHHHHHHcCCccceEE
Q 039636 49 SASKH-ETPREN--CSMWND-L--------TYSKFLDVVLPLIREGKIVY--VEDIVEGLENAPAALLGLFSGRNVGKQA 114 (129)
Q Consensus 49 G~~~~-~~~~~~--~l~~~~-~--------~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~Gkvv 114 (129)
|.... .....+ .++... . .....+.++++++.+|.+++ .+..+|+|+++++||+.+.+++. +|++
T Consensus 287 g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~ 365 (368)
T TIGR02818 287 GVAGAGQEISTRPFQLVTGRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTV 365 (368)
T ss_pred eccCCCCcccccHHHHhccceEEEeeccCCCcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEE
Confidence 76321 111101 111110 0 12456889999999999864 35556899999999999988764 7999
Q ss_pred EEe
Q 039636 115 LDL 117 (129)
Q Consensus 115 v~~ 117 (129)
|++
T Consensus 366 v~~ 368 (368)
T TIGR02818 366 IHY 368 (368)
T ss_pred eeC
Confidence 874
|
The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols. |
| >KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.1e-08 Score=73.77 Aligned_cols=117 Identities=19% Similarity=0.118 Sum_probs=79.1
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCc---ccHHHHhcc------------------------------ccEE
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEE---QDLVTALKR------------------------------GQNA 46 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~---~~~~~~v~~------------------------------G~~v 46 (129)
+|| +|+.++-.+.++++++ +|||+.+.+.... +++.+.+.+ |.++
T Consensus 192 ~GA~~VVi~d~~~~Rle~Ak-~~Ga~~~~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~v 270 (354)
T KOG0024|consen 192 MGASDVVITDLVANRLELAK-KFGATVTDPSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVV 270 (354)
T ss_pred cCCCcEEEeecCHHHHHHHH-HhCCeEEeeccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEE
Confidence 577 7999999999999998 8999998876541 223333333 6766
Q ss_pred EecCCCCC-CCCCCcceeccc-------chHHHHHHHHHHHHcCCceeeeeee--cCcccHHHHHHHHHcCCcc-ceEEE
Q 039636 47 RCSASKHE-TPRENCSMWNDL-------TYSKFLDVVLPLIREGKIVYVEDIV--EGLENAPAALLGLFSGRNV-GKQAL 115 (129)
Q Consensus 47 ~~G~~~~~-~~~~~~l~~~~~-------~~~~~~~~~~~~~~~g~i~~~~~~~--~~l~~~~~a~~~~~~~~~~-Gkvvv 115 (129)
+.|.-... ..+...+..+.. .....+..+++++++|++++...+| |+++++.+||+.+..++.. -|+++
T Consensus 271 lvg~g~~~~~fpi~~v~~kE~~~~g~fry~~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i 350 (354)
T KOG0024|consen 271 LVGMGAEEIQFPIIDVALKEVDLRGSFRYCNGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVII 350 (354)
T ss_pred EeccCCCccccChhhhhhheeeeeeeeeeccccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEE
Confidence 66651111 111111222211 3344789999999999997765554 7999999999999987753 37777
Q ss_pred EeC
Q 039636 116 DLD 118 (129)
Q Consensus 116 ~~~ 118 (129)
...
T Consensus 351 ~~~ 353 (354)
T KOG0024|consen 351 TGP 353 (354)
T ss_pred eCC
Confidence 654
|
|
| >PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A | Back alignment and domain information |
|---|
Probab=98.94 E-value=2.3e-09 Score=67.86 Aligned_cols=48 Identities=38% Similarity=0.359 Sum_probs=40.2
Q ss_pred hHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEE
Q 039636 68 YSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQAL 115 (129)
Q Consensus 68 ~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv 115 (129)
..+.++++++++.+|.|+|.+..+|||+++++||+++++++..||+||
T Consensus 80 ~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 80 RAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp HHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred HHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 456699999999999999999988999999999999999999999997
|
|
| >cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=98.92 E-value=3.3e-08 Score=72.04 Aligned_cols=115 Identities=18% Similarity=0.183 Sum_probs=81.8
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc------------------------------ccEEEecC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------------------GQNARCSA 50 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~------------------------------G~~v~~G~ 50 (129)
+|++|+++++++++.++++ ++|+++++++++ .++.+.+.+ |+++.+|.
T Consensus 182 ~g~~v~~~~~s~~~~~~~~-~~g~~~v~~~~~-~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~ 259 (337)
T cd08261 182 RGARVIVVDIDDERLEFAR-ELGADDTINVGD-EDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHGGRVVLVGL 259 (337)
T ss_pred cCCeEEEECCCHHHHHHHH-HhCCCEEecCcc-cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcC
Confidence 4889999998999999887 899999999886 555555432 66666654
Q ss_pred CCCCCC-C------CC-cceecccchHHHHHHHHHHHHcCCcee--eeeeecCcccHHHHHHHHHcC-CccceEEEEe
Q 039636 51 SKHETP-R------EN-CSMWNDLTYSKFLDVVLPLIREGKIVY--VEDIVEGLENAPAALLGLFSG-RNVGKQALDL 117 (129)
Q Consensus 51 ~~~~~~-~------~~-~l~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~-~~~Gkvvv~~ 117 (129)
.+.... . .+ .+........+.++++++++.+|.+++ .+..+++++++.+|++.+.++ ...||+|+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 260 SKGPVTFPDPEFHKKELTILGSRNATREDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred CCCCCccCHHHHHhCCCEEEEeccCChhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 211100 0 00 111111144567888999999999987 555668999999999999988 4789999864
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, |
| >PLN02740 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=98.92 E-value=2.1e-08 Score=74.68 Aligned_cols=115 Identities=16% Similarity=0.108 Sum_probs=78.4
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCc-ccHHHHhcc------------------------------ccEEEe
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEE-QDLVTALKR------------------------------GQNARC 48 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~-~~~~~~v~~------------------------------G~~v~~ 48 (129)
+|+ +|++++++++|+++++ ++|+++++|+++. .++.+.+++ |+++.+
T Consensus 221 ~G~~~Vi~~~~~~~r~~~a~-~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~ 299 (381)
T PLN02740 221 RGASKIIGVDINPEKFEKGK-EMGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLL 299 (381)
T ss_pred CCCCcEEEEcCChHHHHHHH-HcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEE
Confidence 478 6999999999999998 9999999987651 135544432 567777
Q ss_pred cCCCCCC-CCCC--ccee-ccc--------chHHHHHHHHHHHHcCCcee--eeeeecCcccHHHHHHHHHcCCccceEE
Q 039636 49 SASKHET-PREN--CSMW-NDL--------TYSKFLDVVLPLIREGKIVY--VEDIVEGLENAPAALLGLFSGRNVGKQA 114 (129)
Q Consensus 49 G~~~~~~-~~~~--~l~~-~~~--------~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~Gkvv 114 (129)
|...... ...+ .++. ..+ .....+.++++++.+|.+++ .+..+|+|+++++|++.+.+++. .|++
T Consensus 300 G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~k~~ 378 (381)
T PLN02740 300 GIHPTPKMLPLHPMELFDGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-LRCL 378 (381)
T ss_pred ccCCCCceecccHHHHhcCCeEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-eeEE
Confidence 7622111 1100 1111 011 11356789999999999865 35556899999999999998765 5998
Q ss_pred EEe
Q 039636 115 LDL 117 (129)
Q Consensus 115 v~~ 117 (129)
|.+
T Consensus 379 ~~~ 381 (381)
T PLN02740 379 LHL 381 (381)
T ss_pred EeC
Confidence 863
|
|
| >cd08244 MDR_enoyl_red Possible enoyl reductase | Back alignment and domain information |
|---|
Probab=98.90 E-value=3.9e-08 Score=70.95 Aligned_cols=114 Identities=23% Similarity=0.185 Sum_probs=82.0
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~ 51 (129)
+|++|+++++++++.+.++ .+|+++++++.+ .++.+.+.+ |+++.+|..
T Consensus 166 ~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~ 243 (324)
T cd08244 166 AGATVVGAAGGPAKTALVR-ALGADVAVDYTR-PDWPDQVREALGGGGVTVVLDGVGGAIGRAALALLAPGGRFLTYGWA 243 (324)
T ss_pred CCCEEEEEeCCHHHHHHHH-HcCCCEEEecCC-ccHHHHHHHHcCCCCceEEEECCChHhHHHHHHHhccCcEEEEEecC
Confidence 4889999999999999886 899999998776 555554432 778877752
Q ss_pred CCCC-C-C------CC-cceeccc------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEE
Q 039636 52 KHET-P-R------EN-CSMWNDL------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALD 116 (129)
Q Consensus 52 ~~~~-~-~------~~-~l~~~~~------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~ 116 (129)
+... . . .+ .+..... ...+.++++++++.++.+.+.+...++++++++|++.+.+++..||+|++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 323 (324)
T cd08244 244 SGEWTALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLVPVVGQTFPLERAAEAHAALEARSTVGKVLLL 323 (324)
T ss_pred CCCCCccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCccCccceEEeHHHHHHHHHHHHcCCCCceEEEe
Confidence 1111 0 0 11 1111000 23567888999999999987665668999999999999999999999975
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr |
| >cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=98.90 E-value=2.6e-08 Score=73.09 Aligned_cols=115 Identities=15% Similarity=0.213 Sum_probs=79.7
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc------------------------------ccEEEec
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------------------GQNARCS 49 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~------------------------------G~~v~~G 49 (129)
+|+ .|+++++++++.++++ ++|+++++++.+ .++.+.+.+ |+++.+|
T Consensus 189 ~G~~~v~~~~~~~~~~~~~~-~~g~~~~v~~~~-~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g 266 (351)
T cd08285 189 RGAGRIIAVGSRPNRVELAK-EYGATDIVDYKN-GDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVN 266 (351)
T ss_pred cCCCeEEEEeCCHHHHHHHH-HcCCceEecCCC-CCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEec
Confidence 477 5899989998999987 899999998876 555444332 7787777
Q ss_pred CCCCCC-CCCC--cc---e-eccc------chHHHHHHHHHHHHcCCcee---eeeeecCcccHHHHHHHHHcCC-ccce
Q 039636 50 ASKHET-PREN--CS---M-WNDL------TYSKFLDVVLPLIREGKIVY---VEDIVEGLENAPAALLGLFSGR-NVGK 112 (129)
Q Consensus 50 ~~~~~~-~~~~--~l---~-~~~~------~~~~~~~~~~~~~~~g~i~~---~~~~~~~l~~~~~a~~~~~~~~-~~Gk 112 (129)
..+... ...+ .+ + .... ...+.++++++++.+|.|++ .+..+++|+++++|++.+.+++ ..+|
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k 346 (351)
T cd08285 267 YYGEDDYLPIPREEWGVGMGHKTINGGLCPGGRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIK 346 (351)
T ss_pred ccCCCceeecChhhhhhhccccEEEEeecCCccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEE
Confidence 622211 0000 00 0 0000 23467888999999999988 3334589999999999999987 4789
Q ss_pred EEEEe
Q 039636 113 QALDL 117 (129)
Q Consensus 113 vvv~~ 117 (129)
++|++
T Consensus 347 ~~~~~ 351 (351)
T cd08285 347 PVIIF 351 (351)
T ss_pred EEEeC
Confidence 99864
|
This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd08246 crotonyl_coA_red crotonyl-CoA reductase | Back alignment and domain information |
|---|
Probab=98.90 E-value=4.4e-08 Score=73.04 Aligned_cols=114 Identities=18% Similarity=0.171 Sum_probs=78.4
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcc----------------------cHHHHhcc----------------
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQ----------------------DLVTALKR---------------- 42 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~----------------------~~~~~v~~---------------- 42 (129)
+|++++++++++++.+.++ ++|+++++++++ . .+.+.+.+
T Consensus 217 ~G~~vv~~~~s~~~~~~~~-~~G~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g 294 (393)
T cd08246 217 AGANPVAVVSSEEKAEYCR-ALGAEGVINRRD-FDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPG 294 (393)
T ss_pred cCCeEEEEeCCHHHHHHHH-HcCCCEEEcccc-cccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCc
Confidence 4888899999999999998 899999998643 1 12222211
Q ss_pred --------------ccEEEecCCCCCCCCCC--cceeccc-------chHHHHHHHHHHHHcCCceeeeeeecCcccHHH
Q 039636 43 --------------GQNARCSASKHETPREN--CSMWNDL-------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPA 99 (129)
Q Consensus 43 --------------G~~v~~G~~~~~~~~~~--~l~~~~~-------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~ 99 (129)
|+++.+|.........+ .++..+. ...+.+.++++++.+|.+.+.+..+++++++++
T Consensus 295 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~ 374 (393)
T cd08246 295 RATFPTSVFVCDRGGMVVICAGTTGYNHTYDNRYLWMRQKRIQGSHFANDREAAEANRLVMKGRIDPCLSKVFSLDETPD 374 (393)
T ss_pred hHhHHHHHHHhccCCEEEEEcccCCCCCCCcHHHHhhheeEEEecccCcHHHHHHHHHHHHcCCceeeeeEEEeHHHHHH
Confidence 67777764211111000 1211111 234567889999999999877666789999999
Q ss_pred HHHHHHcC-CccceEEEE
Q 039636 100 ALLGLFSG-RNVGKQALD 116 (129)
Q Consensus 100 a~~~~~~~-~~~Gkvvv~ 116 (129)
|++.+.++ +..||+|+-
T Consensus 375 a~~~~~~~~~~~gkvvv~ 392 (393)
T cd08246 375 AHQLMHRNQHHVGNMAVL 392 (393)
T ss_pred HHHHHHhCccccceEEEe
Confidence 99999999 789999874
|
Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma |
| >cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=98.90 E-value=2.3e-08 Score=73.04 Aligned_cols=113 Identities=19% Similarity=0.076 Sum_probs=78.9
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-------------------------ccEEEecCCCCCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-------------------------GQNARCSASKHET 55 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-------------------------G~~v~~G~~~~~~ 55 (129)
+|++|+++++++++.+.++ ++|+++++++.. .++...... |+++.+|......
T Consensus 192 ~G~~v~~~~~~~~~~~~~~-~~g~~~vi~~~~-~~~~~~~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~ 269 (337)
T cd05283 192 LGAEVTAFSRSPSKKEDAL-KLGADEFIATKD-PEAMKKAAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPL 269 (337)
T ss_pred cCCeEEEEcCCHHHHHHHH-HcCCcEEecCcc-hhhhhhccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCCC
Confidence 4789999999999999987 899999887664 333222111 7777776521111
Q ss_pred -CCCCcceeccc-------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEE
Q 039636 56 -PRENCSMWNDL-------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALD 116 (129)
Q Consensus 56 -~~~~~l~~~~~-------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~ 116 (129)
.....++.+.. ...+.++++++++.+|.+++.+ .+++++++++||+.+.+++..||+|++
T Consensus 270 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 270 PVPPFPLIFGRKSVAGSLIGGRKETQEMLDFAAEHGIKPWV-EVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred ccCHHHHhcCceEEEEecccCHHHHHHHHHHHHhCCCccce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 00001121111 3456789999999999998765 358999999999999999999999874
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic |
| >TIGR01751 crot-CoA-red crotonyl-CoA reductase | Back alignment and domain information |
|---|
Probab=98.89 E-value=4.9e-08 Score=73.01 Aligned_cols=116 Identities=15% Similarity=0.096 Sum_probs=80.4
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCccc----------------------HHHHhcc----------------
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQD----------------------LVTALKR---------------- 42 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~----------------------~~~~v~~---------------- 42 (129)
+|++|++++.++++.+.++ ++|+++++|+++ .+ +.+.+.+
T Consensus 213 ~G~~vi~~~~~~~~~~~~~-~~g~~~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~ 290 (398)
T TIGR01751 213 GGGNPVAVVSSPEKAEYCR-ELGAEAVIDRND-FGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGR 290 (398)
T ss_pred cCCeEEEEcCCHHHHHHHH-HcCCCEEecCCC-cchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcH
Confidence 4888888888999999998 899999998753 21 2222221
Q ss_pred -------------ccEEEecCCCCCCCC--CCcceeccc-------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHH
Q 039636 43 -------------GQNARCSASKHETPR--ENCSMWNDL-------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAA 100 (129)
Q Consensus 43 -------------G~~v~~G~~~~~~~~--~~~l~~~~~-------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a 100 (129)
|+++.+|........ ...++..+. .....++++++++.++.+.+.+..++++++++++
T Consensus 291 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a 370 (398)
T TIGR01751 291 ATFPTSVFVCRRGGMVVICGGTTGYNHDYDNRYLWMRQKRIQGSHFANLREAWEANRLVAKGRIDPTLSKVYPLEEIGQA 370 (398)
T ss_pred HHHHHHHHhhccCCEEEEEccccCCCCCcCHHHHhhcccEEEccccCcHHHHHHHHHHHHCCCcccceeeEEcHHHHHHH
Confidence 777777752111100 001111111 2223467899999999998776667899999999
Q ss_pred HHHHHcCCccceEEEEeC
Q 039636 101 LLGLFSGRNVGKQALDLD 118 (129)
Q Consensus 101 ~~~~~~~~~~Gkvvv~~~ 118 (129)
++.+.+++..||+|+++.
T Consensus 371 ~~~~~~~~~~gkvvv~~~ 388 (398)
T TIGR01751 371 HQDVHRNHHQGNVAVLVL 388 (398)
T ss_pred HHHHHcCCCCceEEEEeC
Confidence 999999999999999985
|
The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. |
| >PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=3.2e-08 Score=72.00 Aligned_cols=115 Identities=16% Similarity=0.202 Sum_probs=80.1
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc----------------------------ccEEEecCCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR----------------------------GQNARCSASK 52 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~----------------------------G~~v~~G~~~ 52 (129)
+|++|+++++++++.+.++ ++|++.+++++...++.+.+++ |+++.+|...
T Consensus 186 ~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~v~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~ 264 (338)
T PRK09422 186 FNAKVIAVDINDDKLALAK-EVGADLTINSKRVEDVAKIIQEKTGGAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPP 264 (338)
T ss_pred CCCeEEEEeCChHHHHHHH-HcCCcEEecccccccHHHHHHHhcCCCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCC
Confidence 3889999999999999997 9999999987531233333321 6677666421
Q ss_pred CCCC-CCCcceeccc-------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEEe
Q 039636 53 HETP-RENCSMWNDL-------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDL 117 (129)
Q Consensus 53 ~~~~-~~~~l~~~~~-------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~ 117 (129)
.... ....+..+.. ...+.++++++++.+|.+.+.+. +++++++++|++.+.++...||+++.+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~v~-~~~~~~~~~a~~~~~~~~~~gkvvv~~ 336 (338)
T PRK09422 265 ESMDLSIPRLVLDGIEVVGSLVGTRQDLEEAFQFGAEGKVVPKVQ-LRPLEDINDIFDEMEQGKIQGRMVIDF 336 (338)
T ss_pred CCceecHHHHhhcCcEEEEecCCCHHHHHHHHHHHHhCCCCccEE-EEcHHHHHHHHHHHHcCCccceEEEec
Confidence 1100 0000111111 24567899999999999977654 479999999999999999999999875
|
|
| >PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=9.5e-08 Score=69.25 Aligned_cols=114 Identities=22% Similarity=0.232 Sum_probs=80.7
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~ 51 (129)
+|++|+++++++++.+.++ ++|+++++++.. .++.+.+++ |+++.+|..
T Consensus 164 ~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~ 241 (327)
T PRK10754 164 LGAKLIGTVGSAQKAQRAK-KAGAWQVINYRE-ENIVERVKEITGGKKVRVVYDSVGKDTWEASLDCLQRRGLMVSFGNA 241 (327)
T ss_pred cCCEEEEEeCCHHHHHHHH-HCCCCEEEcCCC-CcHHHHHHHHcCCCCeEEEEECCcHHHHHHHHHHhccCCEEEEEccC
Confidence 4889999999999999997 899999998776 556555443 778777752
Q ss_pred CCCCC--C-----CC-cceeccc----------chHHHHHHHHHHHHcCCceeee--eeecCcccHHHHHHHHHcCCccc
Q 039636 52 KHETP--R-----EN-CSMWNDL----------TYSKFLDVVLPLIREGKIVYVE--DIVEGLENAPAALLGLFSGRNVG 111 (129)
Q Consensus 52 ~~~~~--~-----~~-~l~~~~~----------~~~~~~~~~~~~~~~g~i~~~~--~~~~~l~~~~~a~~~~~~~~~~G 111 (129)
..... . .+ .+..... ...+.++++++++.+|.+++.. ..+++++++.+|++.+.++...|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 321 (327)
T PRK10754 242 SGPVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQG 321 (327)
T ss_pred CCCCCCcCHHHHhccCceEEecceeecccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcc
Confidence 11110 0 00 0111000 2344567789999999998653 34589999999999999999999
Q ss_pred eEEEE
Q 039636 112 KQALD 116 (129)
Q Consensus 112 kvvv~ 116 (129)
|+|+.
T Consensus 322 ~~~~~ 326 (327)
T PRK10754 322 SSLLI 326 (327)
T ss_pred eEEEe
Confidence 99984
|
|
| >cd05282 ETR_like 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Probab=98.86 E-value=4.3e-08 Score=70.65 Aligned_cols=114 Identities=18% Similarity=0.167 Sum_probs=82.0
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~ 51 (129)
+|++|+++++++++.+.++ ++|+++++++.. .++.+.+.+ |+++.+|..
T Consensus 162 ~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~ 239 (323)
T cd05282 162 LGFKTINVVRRDEQVEELK-ALGADEVIDSSP-EDLAQRVKEATGGAGARLALDAVGGESATRLARSLRPGGTLVNYGLL 239 (323)
T ss_pred CCCeEEEEecChHHHHHHH-hcCCCEEecccc-hhHHHHHHHHhcCCCceEEEECCCCHHHHHHHHhhCCCCEEEEEccC
Confidence 4889999999999999997 899999998875 455555442 778777752
Q ss_pred CCCC--CC------CC-cceec---------cc-chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccce
Q 039636 52 KHET--PR------EN-CSMWN---------DL-TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGK 112 (129)
Q Consensus 52 ~~~~--~~------~~-~l~~~---------~~-~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gk 112 (129)
+... .. .+ .+... ++ ...+.++++++++.+|.+.+.+..+++++++.+|++.+..++..||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~k 319 (323)
T cd05282 240 SGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPVGAKFPLEDFEEAVAAAEQPGRGGK 319 (323)
T ss_pred CCCCCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccCccceecHHHHHHHHHHHhcCCCCce
Confidence 1111 00 01 11110 01 2245788899999999998775566899999999999999888899
Q ss_pred EEEE
Q 039636 113 QALD 116 (129)
Q Consensus 113 vvv~ 116 (129)
+|++
T Consensus 320 vv~~ 323 (323)
T cd05282 320 VLLT 323 (323)
T ss_pred EeeC
Confidence 9864
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman |
| >cd05284 arabinose_DH_like D-arabinose dehydrogenase | Back alignment and domain information |
|---|
Probab=98.81 E-value=7.1e-08 Score=70.26 Aligned_cols=111 Identities=21% Similarity=0.213 Sum_probs=78.4
Q ss_pred C-cEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc------------------------------ccEEEecC
Q 039636 2 G-CYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------------------GQNARCSA 50 (129)
Q Consensus 2 G-a~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~------------------------------G~~v~~G~ 50 (129)
| ++|+++++++++.+.++ ++|++++++++. . +.+.+.+ |+++.+|.
T Consensus 191 g~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~-~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~ 267 (340)
T cd05284 191 TPATVIAVDRSEEALKLAE-RLGADHVLNASD-D-VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGY 267 (340)
T ss_pred CCCcEEEEeCCHHHHHHHH-HhCCcEEEcCCc-c-HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcC
Confidence 6 78999999999999887 899999998876 4 5444432 66666664
Q ss_pred CCCCCCCCCcceeccc-------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEE
Q 039636 51 SKHETPRENCSMWNDL-------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALD 116 (129)
Q Consensus 51 ~~~~~~~~~~l~~~~~-------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~ 116 (129)
.+........++.++. ...+.++++++++.+|.+++.+. .++++++++|++.+.+++..||+|+.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~-~~~~~~~~~a~~~~~~~~~~gkvv~~ 339 (340)
T cd05284 268 GGHGRLPTSDLVPTEISVIGSLWGTRAELVEVVALAESGKVKVEIT-KFPLEDANEALDRLREGRVTGRAVLV 339 (340)
T ss_pred CCCCccCHHHhhhcceEEEEEecccHHHHHHHHHHHHhCCCCcceE-EEeHHHHHHHHHHHHcCCccceEEec
Confidence 2211100001011111 24567888999999999987544 48999999999999999999999875
|
This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d |
| >cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.81 E-value=1e-07 Score=69.85 Aligned_cols=114 Identities=18% Similarity=0.157 Sum_probs=79.5
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecC
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSA 50 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~ 50 (129)
+|+ +|+++++++++.+.+. ++|++.++++++ .++.+.+.+ |+++.+|.
T Consensus 198 ~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~ 275 (350)
T cd08240 198 LGPANIIVVDIDEAKLEAAK-AAGADVVVNGSD-PDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGL 275 (350)
T ss_pred cCCCeEEEEeCCHHHHHHHH-HhCCcEEecCCC-ccHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECC
Confidence 478 7889988999999987 899998888765 444333321 67776665
Q ss_pred CCCCCCC-------CC-cceecccchHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEE
Q 039636 51 SKHETPR-------EN-CSMWNDLTYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALD 116 (129)
Q Consensus 51 ~~~~~~~-------~~-~l~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~ 116 (129)
.+..... .+ .+........+.+.++++++.+|.+++.+..+++++++.+|++.+..++..||++++
T Consensus 276 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 349 (350)
T cd08240 276 FGGEATLPLPLLPLRALTIQGSYVGSLEELRELVALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLK 349 (350)
T ss_pred CCCCCcccHHHHhhcCcEEEEcccCCHHHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence 2211110 00 111101123467888999999999987655678999999999999999999999875
|
6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy |
| >cd08230 glucose_DH Glucose dehydrogenase | Back alignment and domain information |
|---|
Probab=98.80 E-value=4.8e-08 Score=71.91 Aligned_cols=112 Identities=13% Similarity=0.057 Sum_probs=73.2
Q ss_pred CCcEEEEEeC---ChHHHHHHHHhcCCCEEEeCCCcccHHH----------------------Hhc---c-ccEEEecCC
Q 039636 1 MGCYVVGSAG---SKEKIERLKNKFAFDDAFNYKEEQDLVT----------------------ALK---R-GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~Vi~t~~---s~~k~~~~~~~lGad~vi~~~~~~~~~~----------------------~v~---~-G~~v~~G~~ 51 (129)
+|++|+++++ +++|+++++ ++|+++ +++.+ +++.+ .+. . |+++.+|..
T Consensus 195 ~G~~vi~~~~~~~~~~~~~~~~-~~Ga~~-v~~~~-~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~ 271 (355)
T cd08230 195 RGFEVYVLNRRDPPDPKADIVE-ELGATY-VNSSK-TPVAEVKLVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVP 271 (355)
T ss_pred cCCeEEEEecCCCCHHHHHHHH-HcCCEE-ecCCc-cchhhhhhcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecC
Confidence 4789999987 678889887 999986 45554 33322 000 0 888888873
Q ss_pred CC-CCCC-C----C-cceeccc-------chHHHHHHHHHHHHcCC------ceeeeeeecCcccHHHHHHHHHcCCccc
Q 039636 52 KH-ETPR-E----N-CSMWNDL-------TYSKFLDVVLPLIREGK------IVYVEDIVEGLENAPAALLGLFSGRNVG 111 (129)
Q Consensus 52 ~~-~~~~-~----~-~l~~~~~-------~~~~~~~~~~~~~~~g~------i~~~~~~~~~l~~~~~a~~~~~~~~~~G 111 (129)
.. .... . . .++.++. ...+.++++++++.++. +++.+..+|+|+++++||+.+.++. +
T Consensus 272 ~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~ 349 (355)
T cd08230 272 GGGREFEVDGGELNRDLVLGNKALVGSVNANKRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--I 349 (355)
T ss_pred CCCCccccChhhhhhhHhhcCcEEEEecCCchhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--e
Confidence 22 1111 1 0 1222222 23456788889988776 5666667799999999999887654 6
Q ss_pred eEEEEe
Q 039636 112 KQALDL 117 (129)
Q Consensus 112 kvvv~~ 117 (129)
|+||++
T Consensus 350 K~v~~~ 355 (355)
T cd08230 350 KVVIEW 355 (355)
T ss_pred EEEeeC
Confidence 999864
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai |
| >PTZ00354 alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.1e-07 Score=68.82 Aligned_cols=118 Identities=22% Similarity=0.221 Sum_probs=81.9
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCccc-HHHHhcc-----------------------------ccEEEecC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQD-LVTALKR-----------------------------GQNARCSA 50 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~-~~~~v~~-----------------------------G~~v~~G~ 50 (129)
+|++++.+++++++.+.++ ++|+++++++.. .+ +.+.+.+ |+++.+|.
T Consensus 164 ~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~g~~i~~~~ 241 (334)
T PTZ00354 164 YGAATIITTSSEEKVDFCK-KLAAIILIRYPD-EEGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAEVLAVDGKWIVYGF 241 (334)
T ss_pred cCCEEEEEeCCHHHHHHHH-HcCCcEEEecCC-hhHHHHHHHHHhCCCCceEEEECCchHHHHHHHHHhccCCeEEEEec
Confidence 4788888888999999997 899999998765 33 4444332 77777765
Q ss_pred CCCCC---CCCCcceecc-----------c------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCcc
Q 039636 51 SKHET---PRENCSMWND-----------L------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNV 110 (129)
Q Consensus 51 ~~~~~---~~~~~l~~~~-----------~------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~ 110 (129)
..... .....++.++ . ...+.++++++++.+|.+.+.+...+++++++++++.+..++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (334)
T PTZ00354 242 MGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPIVDRTYPLEEVAEAHTFLEQNKNI 321 (334)
T ss_pred CCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccCccccEEcHHHHHHHHHHHHhCCCC
Confidence 21111 1000111111 0 12355678889999999987665668999999999999998888
Q ss_pred ceEEEEeCCC
Q 039636 111 GKQALDLDSC 120 (129)
Q Consensus 111 Gkvvv~~~~~ 120 (129)
||+|+.+.+.
T Consensus 322 ~kvvv~~~~~ 331 (334)
T PTZ00354 322 GKVVLTVNEP 331 (334)
T ss_pred ceEEEecCCC
Confidence 9999988543
|
|
| >PRK05396 tdh L-threonine 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.79 E-value=7.4e-08 Score=70.36 Aligned_cols=115 Identities=18% Similarity=0.213 Sum_probs=76.4
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc------------------------------ccEEEec
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------------------GQNARCS 49 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~------------------------------G~~v~~G 49 (129)
+|+ +|+++++++++.++++ ++|+++++++++ .++.+.+.+ |+++.+|
T Consensus 186 ~G~~~v~~~~~~~~~~~~~~-~lg~~~~~~~~~-~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g 263 (341)
T PRK05396 186 VGARHVVITDVNEYRLELAR-KMGATRAVNVAK-EDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLG 263 (341)
T ss_pred cCCCEEEEEcCCHHHHHHHH-HhCCcEEecCcc-ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEe
Confidence 477 6888888888888887 899999998876 556555432 6666665
Q ss_pred CCCCCCCCCC-cceeccc--------chHHHHHHHHHHHHcC-CceeeeeeecCcccHHHHHHHHHcCCccceEEEEeC
Q 039636 50 ASKHETPREN-CSMWNDL--------TYSKFLDVVLPLIREG-KIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDLD 118 (129)
Q Consensus 50 ~~~~~~~~~~-~l~~~~~--------~~~~~~~~~~~~~~~g-~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~~ 118 (129)
.......... .++.+.. ...+.+..+++++.++ .+.+.+..+++++++.+|++.+..++ .||+|++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~~ 341 (341)
T PRK05396 264 IPPGDMAIDWNKVIFKGLTIKGIYGREMFETWYKMSALLQSGLDLSPIITHRFPIDDFQKGFEAMRSGQ-SGKVILDWD 341 (341)
T ss_pred cCCCCCcccHHHHhhcceEEEEEEccCccchHHHHHHHHHcCCChhHheEEEEeHHHHHHHHHHHhcCC-CceEEEecC
Confidence 4211110000 1111110 2234556788899888 45555555689999999999999877 899998764
|
|
| >cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.2e-07 Score=70.15 Aligned_cols=114 Identities=13% Similarity=0.132 Sum_probs=75.7
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCc-ccHHHHhcc------------------------------ccEEEe
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEE-QDLVTALKR------------------------------GQNARC 48 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~-~~~~~~v~~------------------------------G~~v~~ 48 (129)
+|+ +|++++++++|++.++ ++|+++++++.+. .++.+.+++ |+++.+
T Consensus 207 ~G~~~Vi~~~~~~~~~~~~~-~~ga~~~i~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 285 (365)
T cd08277 207 AGASRIIGVDINEDKFEKAK-EFGATDFINPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVV 285 (365)
T ss_pred cCCCeEEEEeCCHHHHHHHH-HcCCCcEeccccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEE
Confidence 477 7999999999999997 8999999987541 122333221 677777
Q ss_pred cCCCCCCCC--CCccee-ccc--------chHHHHHHHHHHHHcCCcee--eeeeecCcccHHHHHHHHHcCCccceEEE
Q 039636 49 SASKHETPR--ENCSMW-NDL--------TYSKFLDVVLPLIREGKIVY--VEDIVEGLENAPAALLGLFSGRNVGKQAL 115 (129)
Q Consensus 49 G~~~~~~~~--~~~l~~-~~~--------~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv 115 (129)
|........ ...++. .++ .....++++++++.+|.+++ .+..+|+|+++++||+.+.+++ ..|+++
T Consensus 286 g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~-~~k~~i 364 (365)
T cd08277 286 GVPPGAELSIRPFQLILGRTWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGE-CIRTVI 364 (365)
T ss_pred cCCCccccccCHhHHhhCCEEEeeecCCCChHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCC-CceEee
Confidence 752211111 111211 111 12446789999999998654 4556689999999999999877 568876
Q ss_pred E
Q 039636 116 D 116 (129)
Q Consensus 116 ~ 116 (129)
+
T Consensus 365 ~ 365 (365)
T cd08277 365 T 365 (365)
T ss_pred C
Confidence 3
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i |
| >cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=98.77 E-value=2e-07 Score=67.42 Aligned_cols=116 Identities=22% Similarity=0.194 Sum_probs=80.6
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~ 51 (129)
+|++|++++.++++.+.++ ++|+++++++....++.+.+.+ |+++.+|..
T Consensus 183 ~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~G~~v~~g~~ 261 (336)
T cd08276 183 AGARVIATSSSDEKLERAK-ALGADHVINYRTTPDWGEEVLKLTGGRGVDHVVEVGGPGTLAQSIKAVAPGGVISLIGFL 261 (336)
T ss_pred cCCEEEEEeCCHHHHHHHH-HcCCCEEEcCCcccCHHHHHHHHcCCCCCcEEEECCChHHHHHHHHhhcCCCEEEEEccC
Confidence 4889999999999999998 7899999886531234444332 777777652
Q ss_pred CCCCCCCC--cceeccc-------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEEe
Q 039636 52 KHETPREN--CSMWNDL-------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDL 117 (129)
Q Consensus 52 ~~~~~~~~--~l~~~~~-------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~ 117 (129)
.......+ .++.++. .....++++.+++.++.+.+.....+++++++++++.+.++...||+++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 336 (336)
T cd08276 262 SGFEAPVLLLPLLTKGATLRGIAVGSRAQFEAMNRAIEAHRIRPVIDRVFPFEEAKEAYRYLESGSHFGKVVIRV 336 (336)
T ss_pred CCCccCcCHHHHhhcceEEEEEecCcHHHHHHHHHHHHcCCcccccCcEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 11110000 1111111 335678889999999988776555689999999999999998899999863
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >TIGR00692 tdh L-threonine 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.1e-07 Score=69.39 Aligned_cols=114 Identities=21% Similarity=0.218 Sum_probs=77.0
Q ss_pred CCcE-EEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc------------------------------ccEEEec
Q 039636 1 MGCY-VVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------------------GQNARCS 49 (129)
Q Consensus 1 ~Ga~-Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~------------------------------G~~v~~G 49 (129)
+|++ |+++.+++++.+.++ .+|+++++++.+ .++.+.+.+ |+++.+|
T Consensus 184 ~G~~~v~~~~~~~~~~~~~~-~~g~~~~v~~~~-~~~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g 261 (340)
T TIGR00692 184 SGAYPVIVSDPNEYRLELAK-KMGATYVVNPFK-EDVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPGGRVSLLG 261 (340)
T ss_pred cCCcEEEEECCCHHHHHHHH-HhCCcEEEcccc-cCHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCCCEEEEEc
Confidence 4775 888878888888887 899999998765 555544422 6677666
Q ss_pred CCCCCCC-C-CCcceeccc--------chHHHHHHHHHHHHcCCce--eeeeeecCcccHHHHHHHHHcCCccceEEEEe
Q 039636 50 ASKHETP-R-ENCSMWNDL--------TYSKFLDVVLPLIREGKIV--YVEDIVEGLENAPAALLGLFSGRNVGKQALDL 117 (129)
Q Consensus 50 ~~~~~~~-~-~~~l~~~~~--------~~~~~~~~~~~~~~~g~i~--~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~ 117 (129)
....... . ...++.+.. ...+.+.++++++.+|.++ +.+...++++++.++++.+.+++ .||+|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~gkvvv~~ 340 (340)
T TIGR00692 262 LPPGKVTIDFTNKVIFKGLTIYGITGRHMFETWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQ-TGKVILSL 340 (340)
T ss_pred cCCCCcccchhhhhhhcceEEEEEecCCchhhHHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCC-CceEEEeC
Confidence 4211100 0 001111111 2345678899999999986 34445689999999999999887 49999864
|
E. coli His-90 modulates substrate specificity and is believed part of the active site. |
| >cd05288 PGDH Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Probab=98.76 E-value=1e-07 Score=69.04 Aligned_cols=114 Identities=44% Similarity=0.666 Sum_probs=80.1
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc----------------------------ccEEEecCCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR----------------------------GQNARCSASK 52 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~----------------------------G~~v~~G~~~ 52 (129)
+|++|+++++++++.+.+++.+|+++++++++ .++.+.+.+ |+++.+|...
T Consensus 169 ~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~v~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~ 247 (329)
T cd05288 169 LGARVVGIAGSDEKCRWLVEELGFDAAINYKT-PDLAEALKEAAPDGIDVYFDNVGGEILDAALTLLNKGGRIALCGAIS 247 (329)
T ss_pred cCCEEEEEeCCHHHHHHHHhhcCCceEEecCC-hhHHHHHHHhccCCceEEEEcchHHHHHHHHHhcCCCceEEEEeecc
Confidence 47899999999999998872399999999876 555444331 7888887521
Q ss_pred CC-C--C-----C-----CC-cceeccc-----chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceE
Q 039636 53 HE-T--P-----R-----EN-CSMWNDL-----TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQ 113 (129)
Q Consensus 53 ~~-~--~-----~-----~~-~l~~~~~-----~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkv 113 (129)
.. . + . .+ .+..... ...+.+.++++++.+|.+++....+++++++.++++.+.+++..||+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkv 327 (329)
T cd05288 248 QYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYREDVVEGLENAPEAFLGLFTGKNTGKL 327 (329)
T ss_pred CcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccccccccHHHHHHHHHHHhcCCCccce
Confidence 11 0 0 0 00 1111001 12457888999999999987755668999999999999998888998
Q ss_pred EE
Q 039636 114 AL 115 (129)
Q Consensus 114 vv 115 (129)
|+
T Consensus 328 vv 329 (329)
T cd05288 328 VV 329 (329)
T ss_pred eC
Confidence 74
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino |
| >cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH) | Back alignment and domain information |
|---|
Probab=98.75 E-value=1.2e-07 Score=69.88 Aligned_cols=113 Identities=19% Similarity=0.158 Sum_probs=74.2
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHH---HHhcc------------------------------ccEE
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLV---TALKR------------------------------GQNA 46 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~---~~v~~------------------------------G~~v 46 (129)
+|+ +|+++++++++.++++ ++|+++++++++ .++. +.+.+ |+++
T Consensus 200 ~G~~~v~~~~~~~~~~~~~~-~~g~~~vi~~~~-~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v 277 (361)
T cd08231 200 AGARRVIVIDGSPERLELAR-EFGADATIDIDE-LPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYV 277 (361)
T ss_pred cCCCeEEEEcCCHHHHHHHH-HcCCCeEEcCcc-cccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEE
Confidence 478 8999999999999887 899999998764 3221 22222 7777
Q ss_pred EecCCCCC-CCCCC--cceeccc-------chHHHHHHHHHHHHcC--Cc--eeeeeeecCcccHHHHHHHHHcCCccce
Q 039636 47 RCSASKHE-TPREN--CSMWNDL-------TYSKFLDVVLPLIREG--KI--VYVEDIVEGLENAPAALLGLFSGRNVGK 112 (129)
Q Consensus 47 ~~G~~~~~-~~~~~--~l~~~~~-------~~~~~~~~~~~~~~~g--~i--~~~~~~~~~l~~~~~a~~~~~~~~~~Gk 112 (129)
.+|..+.. ....+ .++.+.. ...+.++++++++.++ .+ .+.+..+|+++++++||+.+.++. .+|
T Consensus 278 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~-~~k 356 (361)
T cd08231 278 LVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDPSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGT-ALK 356 (361)
T ss_pred EEcCCCCCCccccCHHHHhhcccEEEEcccCCchhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCC-ceE
Confidence 77652211 10000 1111111 2344577888888877 43 345556689999999999998876 489
Q ss_pred EEEE
Q 039636 113 QALD 116 (129)
Q Consensus 113 vvv~ 116 (129)
+||+
T Consensus 357 ~vi~ 360 (361)
T cd08231 357 VVID 360 (361)
T ss_pred EEeC
Confidence 9985
|
This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino |
| >cd08301 alcohol_DH_plants Plant alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.8e-07 Score=69.21 Aligned_cols=112 Identities=14% Similarity=0.134 Sum_probs=75.8
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCc-ccHHHHhcc------------------------------ccEEEe
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEE-QDLVTALKR------------------------------GQNARC 48 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~-~~~~~~v~~------------------------------G~~v~~ 48 (129)
+|+ +|+++++++++.++++ ++|++.++++.+. +++.+.+++ |+++.+
T Consensus 210 ~G~~~vi~~~~~~~~~~~~~-~~Ga~~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~ 288 (369)
T cd08301 210 RGASRIIGVDLNPSKFEQAK-KFGVTEFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLL 288 (369)
T ss_pred cCCCeEEEEcCCHHHHHHHH-HcCCceEEcccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEE
Confidence 477 7999999999999997 9999999987541 123333321 577777
Q ss_pred cCCCCC-CCCCC--cceeccc----------chHHHHHHHHHHHHcCCceee--eeeecCcccHHHHHHHHHcCCccceE
Q 039636 49 SASKHE-TPREN--CSMWNDL----------TYSKFLDVVLPLIREGKIVYV--EDIVEGLENAPAALLGLFSGRNVGKQ 113 (129)
Q Consensus 49 G~~~~~-~~~~~--~l~~~~~----------~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~Gkv 113 (129)
|..... ....+ .++ ++. .....++++++++.+|.+++. +..+|||+++++||+.+.+++.. |+
T Consensus 289 g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~ 366 (369)
T cd08301 289 GVPHKDAVFSTHPMNLL-NGRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECL-RC 366 (369)
T ss_pred CcCCCCcccccCHHHHh-cCCeEEEEecCCCChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCce-eE
Confidence 763211 11101 111 111 224568899999999988653 45568999999999999998764 88
Q ss_pred EE
Q 039636 114 AL 115 (129)
Q Consensus 114 vv 115 (129)
+|
T Consensus 367 ~~ 368 (369)
T cd08301 367 IL 368 (369)
T ss_pred Ee
Confidence 76
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the |
| >cd05286 QOR2 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=98.73 E-value=3e-07 Score=65.57 Aligned_cols=114 Identities=21% Similarity=0.241 Sum_probs=79.8
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~ 51 (129)
+|++|+++++++++.+.++ ++|+++++++.. .++.+.+.+ |+++.+|..
T Consensus 160 ~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~ 237 (320)
T cd05286 160 LGATVIGTVSSEEKAELAR-AAGADHVINYRD-EDFVERVREITGGRGVDVVYDGVGKDTFEGSLDSLRPRGTLVSFGNA 237 (320)
T ss_pred cCCEEEEEcCCHHHHHHHH-HCCCCEEEeCCc-hhHHHHHHHHcCCCCeeEEEECCCcHhHHHHHHhhccCcEEEEEecC
Confidence 4789999999999999987 899999988765 445444332 777777651
Q ss_pred CCCCCC--------CC-cceec-------cc-chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEE
Q 039636 52 KHETPR--------EN-CSMWN-------DL-TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQA 114 (129)
Q Consensus 52 ~~~~~~--------~~-~l~~~-------~~-~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvv 114 (129)
...... .+ .+... .+ ...+.++++++++.++.+.+.+...++++++++|++.+..+...||++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv 317 (320)
T cd05286 238 SGPVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVEIGKRYPLADAAQAHRDLESRKTTGKLL 317 (320)
T ss_pred CCCCCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCcccceEcHHHHHHHHHHHHcCCCCceEE
Confidence 111100 01 11100 01 234567788999999999876555689999999999999998899998
Q ss_pred EE
Q 039636 115 LD 116 (129)
Q Consensus 115 v~ 116 (129)
++
T Consensus 318 ~~ 319 (320)
T cd05286 318 LI 319 (320)
T ss_pred Ee
Confidence 74
|
Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone |
| >cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=98.73 E-value=2.1e-07 Score=68.78 Aligned_cols=114 Identities=18% Similarity=0.185 Sum_probs=78.8
Q ss_pred CCcE-EEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc------------------------------ccEEEec
Q 039636 1 MGCY-VVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------------------GQNARCS 49 (129)
Q Consensus 1 ~Ga~-Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~------------------------------G~~v~~G 49 (129)
+|+. |+++++++++.+.++ ++|++.++++++ .++.+.+++ |+++.+|
T Consensus 210 ~G~~~vi~~~~s~~~~~~~~-~~g~~~v~~~~~-~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g 287 (367)
T cd08263 210 FGASPIIAVDVRDEKLAKAK-ELGATHTVNAAK-EDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVG 287 (367)
T ss_pred cCCCeEEEEeCCHHHHHHHH-HhCCceEecCCc-ccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEc
Confidence 4676 898988999999887 899999998876 555443332 6777776
Q ss_pred CCCCC-CCCCC--cceeccc--------chHHHHHHHHHHHHcCCceee--eeeecCcccHHHHHHHHHcCCccceEEEE
Q 039636 50 ASKHE-TPREN--CSMWNDL--------TYSKFLDVVLPLIREGKIVYV--EDIVEGLENAPAALLGLFSGRNVGKQALD 116 (129)
Q Consensus 50 ~~~~~-~~~~~--~l~~~~~--------~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~ 116 (129)
..... ....+ .++.+.. ...+.++++++++.+|.+.+. +...++++++.+|++.+.+++..||+||.
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 288 LAPGGATAEIPITRLVRRGIKIIGSYGARPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred cCCCCCccccCHHHHhhCCeEEEecCCCCcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 41111 00000 1111111 224678899999999999874 33458999999999999999989999873
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu |
| >cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=98.72 E-value=2.9e-07 Score=67.22 Aligned_cols=112 Identities=22% Similarity=0.221 Sum_probs=76.1
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc----------------------------ccEEEecCCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR----------------------------GQNARCSASK 52 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~----------------------------G~~v~~G~~~ 52 (129)
+|++|+++++++ +.+.++ ++|++++++... ..+.+ ... |+++.+|...
T Consensus 201 ~g~~vi~~~~~~-~~~~~~-~~g~~~~~~~~~-~~~~~-~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~ 276 (350)
T cd08274 201 RGAIVIAVAGAA-KEEAVR-ALGADTVILRDA-PLLAD-AKALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIA 276 (350)
T ss_pred cCCEEEEEeCch-hhHHHH-hcCCeEEEeCCC-ccHHH-HHhhCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccC
Confidence 488999998765 778887 899987666543 22222 110 7787777521
Q ss_pred CCCCCCC--cceeccc-------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEE
Q 039636 53 HETPREN--CSMWNDL-------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALD 116 (129)
Q Consensus 53 ~~~~~~~--~l~~~~~-------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~ 116 (129)
......+ .++.++. .....+.++++++.+|.+++.+..+++++++.+|++.+..+...||+|++
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~ 349 (350)
T cd08274 277 GPVVELDLRTLYLKDLTLFGSTLGTREVFRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLV 349 (350)
T ss_pred CccccCCHHHhhhcceEEEEeecCCHHHHHHHHHHHHCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEe
Confidence 1100001 1122211 34567899999999999987765668999999999999998889999875
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=98.69 E-value=5.4e-07 Score=65.01 Aligned_cols=114 Identities=16% Similarity=0.231 Sum_probs=74.5
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCccc--HHHHhcc-------------------------ccEEEecCCCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQD--LVTALKR-------------------------GQNARCSASKH 53 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~--~~~~v~~-------------------------G~~v~~G~~~~ 53 (129)
+|++|+++++++++.+.++ ++|+++++++++ .. ....... |+++.+|..+.
T Consensus 170 ~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~ 247 (325)
T cd05280 170 LGYTVVALTGKEEQADYLK-SLGASEVLDRED-LLDESKKPLLKARWAGAIDTVGGDVLANLLKQTKYGGVVASCGNAAG 247 (325)
T ss_pred cCCEEEEEeCCHHHHHHHH-hcCCcEEEcchh-HHHHHHHHhcCCCccEEEECCchHHHHHHHHhhcCCCEEEEEecCCC
Confidence 4889999999999999997 899999988654 21 1111110 88888876221
Q ss_pred CC--CCCCcceeccc-------------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEEe
Q 039636 54 ET--PRENCSMWNDL-------------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDL 117 (129)
Q Consensus 54 ~~--~~~~~l~~~~~-------------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~ 117 (129)
.. .....++.++. ...+.++.+..++..+... .+..+++++++++|++.+.+++..||+|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 248 PELTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATEWKPDLLE-IVVREISLEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred CccccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHHHhcCCcc-ceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence 11 00001111111 1234556666666777444 4555689999999999999999999999864
|
Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so |
| >cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase | Back alignment and domain information |
|---|
Probab=98.69 E-value=2.5e-07 Score=67.50 Aligned_cols=113 Identities=20% Similarity=0.172 Sum_probs=77.5
Q ss_pred CCcE-EEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc------------------------------ccEEEec
Q 039636 1 MGCY-VVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------------------GQNARCS 49 (129)
Q Consensus 1 ~Ga~-Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~------------------------------G~~v~~G 49 (129)
+|++ |+++++++++.+.++ ++|+++++++++ .++.+.+.+ |+++.+|
T Consensus 188 ~g~~~v~~~~~s~~~~~~~~-~~g~~~~~~~~~-~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~ 265 (343)
T cd08235 188 SGARKVIVSDLNEFRLEFAK-KLGADYTIDAAE-EDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFG 265 (343)
T ss_pred cCCcEEEEECCCHHHHHHHH-HhCCcEEecCCc-cCHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEe
Confidence 4777 899989999998887 899999998876 566554432 5666655
Q ss_pred CCCCCC-CCCC--cceeccc-------chHHHHHHHHHHHHcCCcee--eeeeecCcccHHHHHHHHHcCCccceEEEE
Q 039636 50 ASKHET-PREN--CSMWNDL-------TYSKFLDVVLPLIREGKIVY--VEDIVEGLENAPAALLGLFSGRNVGKQALD 116 (129)
Q Consensus 50 ~~~~~~-~~~~--~l~~~~~-------~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~ 116 (129)
...... ...+ .+..++. ...+.++++++++.+|.+++ .+...++++++.+|++.+.+++ .||+|++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~ 343 (343)
T cd08235 266 GLPKGSTVNIDPNLIHYREITITGSYAASPEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT 343 (343)
T ss_pred ccCCCCCcccCHHHHhhCceEEEEEecCChhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence 411110 0000 0111111 23467888999999999863 3445689999999999999999 9999873
|
Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i |
| >cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=98.68 E-value=3.9e-07 Score=65.38 Aligned_cols=113 Identities=11% Similarity=0.070 Sum_probs=77.4
Q ss_pred CCcE-EEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc------------------------------ccEEEec
Q 039636 1 MGCY-VVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------------------GQNARCS 49 (129)
Q Consensus 1 ~Ga~-Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~------------------------------G~~v~~G 49 (129)
+|++ |+++++++++.++++ ++|++++++++. .++.+.+.+ |+++.+|
T Consensus 152 ~g~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g 229 (312)
T cd08269 152 AGARRVIAIDRRPARLALAR-ELGATEVVTDDS-EAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFG 229 (312)
T ss_pred cCCcEEEEECCCHHHHHHHH-HhCCceEecCCC-cCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEc
Confidence 4777 999999988888887 899998888655 455444432 6777776
Q ss_pred CCCCCCCC--------CC-ccee---ccc-chHHHHHHHHHHHHcCCceee--eeeecCcccHHHHHHHHHcCCc-cceE
Q 039636 50 ASKHETPR--------EN-CSMW---NDL-TYSKFLDVVLPLIREGKIVYV--EDIVEGLENAPAALLGLFSGRN-VGKQ 113 (129)
Q Consensus 50 ~~~~~~~~--------~~-~l~~---~~~-~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~-~Gkv 113 (129)
..+..... .+ .+.. .+. ...+.++++++++.+|.+.+. +..+++++++++|++.+.+++. .+|+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 309 (312)
T cd08269 230 YHQDGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKG 309 (312)
T ss_pred cCCCCCcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEE
Confidence 42111100 00 1110 111 335788999999999999873 3455899999999999999865 5898
Q ss_pred EE
Q 039636 114 AL 115 (129)
Q Consensus 114 vv 115 (129)
++
T Consensus 310 ~~ 311 (312)
T cd08269 310 VI 311 (312)
T ss_pred Ee
Confidence 86
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i |
| >PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=98.68 E-value=1e-07 Score=60.47 Aligned_cols=40 Identities=30% Similarity=0.583 Sum_probs=36.3
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR 42 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~ 42 (129)
+|++|++++++++|+++++ ++|+++++++++ .++.+.+++
T Consensus 13 ~G~~vi~~~~~~~k~~~~~-~~Ga~~~~~~~~-~~~~~~i~~ 52 (130)
T PF00107_consen 13 MGAKVIATDRSEEKLELAK-ELGADHVIDYSD-DDFVEQIRE 52 (130)
T ss_dssp TTSEEEEEESSHHHHHHHH-HTTESEEEETTT-SSHHHHHHH
T ss_pred cCCEEEEEECCHHHHHHHH-hhcccccccccc-ccccccccc
Confidence 4889999999999999998 999999999988 778888876
|
1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: |
| >cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members | Back alignment and domain information |
|---|
Probab=98.68 E-value=4.7e-07 Score=65.64 Aligned_cols=114 Identities=22% Similarity=0.236 Sum_probs=79.2
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~ 51 (129)
+|++|+++++++++.+.++ ++|+++++++++ ..+.+.+.. |+++.+|..
T Consensus 188 ~G~~V~~~~~s~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 265 (338)
T cd08254 188 MGAAVIAVDIKEEKLELAK-ELGADEVLNSLD-DSPKDKKAAGLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLG 265 (338)
T ss_pred cCCEEEEEcCCHHHHHHHH-HhCCCEEEcCCC-cCHHHHHHHhcCCCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCC
Confidence 4789999999999999997 899999888765 444332211 667666541
Q ss_pred CCCCCCC-Ccceeccc-------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEEe
Q 039636 52 KHETPRE-NCSMWNDL-------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDL 117 (129)
Q Consensus 52 ~~~~~~~-~~l~~~~~-------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~ 117 (129)
....... ..++.+++ ...+.++.+++++.+|.|.+. ...++++++.++++.+.+++..||+|+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 266 RDKLTVDLSDLIARELRIIGSFGGTPEDLPEVLDLIAKGKLDPQ-VETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred CCCCccCHHHHhhCccEEEEeccCCHHHHHHHHHHHHcCCCccc-ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 1110000 01111111 225678889999999999876 34589999999999999999999999863
|
This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio |
| >cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=98.67 E-value=6.3e-07 Score=64.31 Aligned_cols=112 Identities=17% Similarity=0.154 Sum_probs=77.1
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc---------------------------ccEEEecCCCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR---------------------------GQNARCSASKH 53 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~---------------------------G~~v~~G~~~~ 53 (129)
+|++|+++++++++.+.++ ++|++++++. . .++.+.+.+ |+++.+|....
T Consensus 166 ~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~-~-~~~~~~i~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~ 242 (320)
T cd08243 166 LGATVTATTRSPERAALLK-ELGADEVVID-D-GAIAEQLRAAPGGFDKVLELVGTATLKDSLRHLRPGGIVCMTGLLGG 242 (320)
T ss_pred cCCEEEEEeCCHHHHHHHH-hcCCcEEEec-C-ccHHHHHHHhCCCceEEEECCChHHHHHHHHHhccCCEEEEEccCCC
Confidence 4889999999999999887 8999888754 3 344333221 78887775111
Q ss_pred C-C---CCCCcce--eccc---------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEE
Q 039636 54 E-T---PRENCSM--WNDL---------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQAL 115 (129)
Q Consensus 54 ~-~---~~~~~l~--~~~~---------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv 115 (129)
. . .....+. .+.. .....++++++++..+.+++.+..+++++++.+|++.+.++...||+|+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 243 QWTLEDFNPMDDIPSGVNLTLTGSSSGDVPQTPLQELFDFVAAGHLDIPPSKVFTFDEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred CcccCCcchhhhhhhccceEEEecchhhhhHHHHHHHHHHHHCCceecccccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 0 0 0000001 1111 2245688899999999998765566899999999999999988999885
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd08249 enoyl_reductase_like enoyl_reductase_like | Back alignment and domain information |
|---|
Probab=98.67 E-value=5.4e-07 Score=65.94 Aligned_cols=114 Identities=25% Similarity=0.319 Sum_probs=78.6
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-------------------------------ccEEEec
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-------------------------------GQNARCS 49 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-------------------------------G~~v~~G 49 (129)
+|++|++++ ++++.+.++ ++|+++++++.+ .++.+.+++ |+++.+|
T Consensus 178 ~G~~v~~~~-~~~~~~~~~-~~g~~~v~~~~~-~~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g 254 (339)
T cd08249 178 AGYKVITTA-SPKNFDLVK-SLGADAVFDYHD-PDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLL 254 (339)
T ss_pred cCCeEEEEE-CcccHHHHH-hcCCCEEEECCC-chHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEec
Confidence 478899888 567888887 899999999876 556554432 4555555
Q ss_pred CCCCCC-CCCC---------ccee---ccc-chHHHHHHHHHHHHcCCceeeeeeecC--cccHHHHHHHHHcCC-ccce
Q 039636 50 ASKHET-PREN---------CSMW---NDL-TYSKFLDVVLPLIREGKIVYVEDIVEG--LENAPAALLGLFSGR-NVGK 112 (129)
Q Consensus 50 ~~~~~~-~~~~---------~l~~---~~~-~~~~~~~~~~~~~~~g~i~~~~~~~~~--l~~~~~a~~~~~~~~-~~Gk 112 (129)
..+... ...+ .+.. ... .....++++++++.++.+.+.+..+++ ++++++|++.+..++ ..||
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k 334 (339)
T cd08249 255 PVPEETEPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEK 334 (339)
T ss_pred CCCccccCCCCceEEEEEeeeecccccccccchHHHHHHHHHHHHcCCccCCCceecCCcHHHHHHHHHHHHCCCccceE
Confidence 411110 0001 1110 111 334677889999999999887555677 999999999999999 8999
Q ss_pred EEEEe
Q 039636 113 QALDL 117 (129)
Q Consensus 113 vvv~~ 117 (129)
+|+++
T Consensus 335 vvv~~ 339 (339)
T cd08249 335 LVVRL 339 (339)
T ss_pred EEEeC
Confidence 99874
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de |
| >TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=98.67 E-value=4.8e-07 Score=65.75 Aligned_cols=112 Identities=20% Similarity=0.202 Sum_probs=75.7
Q ss_pred CcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCCC
Q 039636 2 GCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSASK 52 (129)
Q Consensus 2 Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~~ 52 (129)
|++|+++++++++.+.++ ++|+++++++.. ++.+.+.+ |+++.++...
T Consensus 174 G~~vi~~~~~~~~~~~l~-~~g~~~~~~~~~--~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~~ 250 (336)
T TIGR02817 174 GLTVIATASRPESQEWVL-ELGAHHVIDHSK--PLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQGRFALIDDPA 250 (336)
T ss_pred CCEEEEEcCcHHHHHHHH-HcCCCEEEECCC--CHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccCCEEEEEcccc
Confidence 889999999999999997 899999998653 34443322 5666554310
Q ss_pred CCCC---C-CC-cce----e-cc----c---chHHHHHHHHHHHHcCCceeeeeeec---CcccHHHHHHHHHcCCccce
Q 039636 53 HETP---R-EN-CSM----W-ND----L---TYSKFLDVVLPLIREGKIVYVEDIVE---GLENAPAALLGLFSGRNVGK 112 (129)
Q Consensus 53 ~~~~---~-~~-~l~----~-~~----~---~~~~~~~~~~~~~~~g~i~~~~~~~~---~l~~~~~a~~~~~~~~~~Gk 112 (129)
.... . .+ .+. . .. . ...+.++++++++.+|.+++.+..++ +++++++|++.+.+++..||
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk 330 (336)
T TIGR02817 251 ELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTTLAETFGTINAANLKRAHALIESGKARGK 330 (336)
T ss_pred cccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeeccchhccCCCCHHHHHHHHHHHHcCCccce
Confidence 0000 0 10 111 0 00 0 11267899999999999987654444 47899999999999999999
Q ss_pred EEEE
Q 039636 113 QALD 116 (129)
Q Consensus 113 vvv~ 116 (129)
+|+.
T Consensus 331 vvv~ 334 (336)
T TIGR02817 331 IVLE 334 (336)
T ss_pred EEEe
Confidence 9875
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model. |
| >TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase | Back alignment and domain information |
|---|
Probab=98.67 E-value=3.3e-07 Score=66.43 Aligned_cols=115 Identities=14% Similarity=0.086 Sum_probs=73.3
Q ss_pred CCcE-EEEEeCChHHHHHHHHh-----------cCCCEEEeCCCccc-HHHHhcc----ccEEEecCCCCCCC-CCCcce
Q 039636 1 MGCY-VVGSAGSKEKIERLKNK-----------FAFDDAFNYKEEQD-LVTALKR----GQNARCSASKHETP-RENCSM 62 (129)
Q Consensus 1 ~Ga~-Vi~t~~s~~k~~~~~~~-----------lGad~vi~~~~~~~-~~~~v~~----G~~v~~G~~~~~~~-~~~~l~ 62 (129)
+|++ |++++.++++++.+. . -|+|.+|+...... +...+.. |+++.+|.++.... ....++
T Consensus 167 ~G~~~v~~~~~~~~rl~~a~-~~~~i~~~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~ 245 (308)
T TIGR01202 167 AGGSPPAVWETNPRRRDGAT-GYEVLDPEKDPRRDYRAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTEPVNFDFVPAF 245 (308)
T ss_pred cCCceEEEeCCCHHHHHhhh-hccccChhhccCCCCCEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCCCcccccchhh
Confidence 4786 555666666766554 2 24577777665222 2222222 99999987322111 111122
Q ss_pred eccc-------chHHHHHHHHHHHHcCCceee--eeeecCcccHHHHHHHHHcCCccceEEEE
Q 039636 63 WNDL-------TYSKFLDVVLPLIREGKIVYV--EDIVEGLENAPAALLGLFSGRNVGKQALD 116 (129)
Q Consensus 63 ~~~~-------~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~ 116 (129)
.++. ...+.++++++++.+|.+++. +..+|||+++++||+.+.+++..+|++|+
T Consensus 246 ~~~~~i~~~~~~~~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 246 MKEARLRIAAEWQPGDLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred hcceEEEEecccchhHHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence 2221 345678999999999999874 45568999999999998887778999874
|
|
| >cd08251 polyketide_synthase polyketide synthase | Back alignment and domain information |
|---|
Probab=98.67 E-value=5.4e-07 Score=64.05 Aligned_cols=113 Identities=21% Similarity=0.305 Sum_probs=79.5
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~ 51 (129)
+|++|+++++++++.+.++ .+|++.++++.. .++.+.+.+ |+++.+|..
T Consensus 144 ~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~i~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~ 221 (303)
T cd08251 144 KGAEIYATASSDDKLEYLK-QLGVPHVINYVE-EDFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMT 221 (303)
T ss_pred cCCEEEEEcCCHHHHHHHH-HcCCCEEEeCCC-ccHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHhccCcEEEEEecc
Confidence 4889999999999999987 899999998765 555544432 777777641
Q ss_pred CCC--C-CC-----CC-cceeccc---------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceE
Q 039636 52 KHE--T-PR-----EN-CSMWNDL---------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQ 113 (129)
Q Consensus 52 ~~~--~-~~-----~~-~l~~~~~---------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkv 113 (129)
+.. . .. .+ .+..... ...+.+.++++++.+|.+++.....+++++++++++.+.+++..||+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 301 (303)
T cd08251 222 ALKSAPSVDLSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDDIGEAYRYLSDRENIGKV 301 (303)
T ss_pred CCCccCccChhHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCCCceEEcHHHHHHHHHHHHhCCCcceE
Confidence 111 0 00 01 0000000 23456788999999999987655668999999999999999889998
Q ss_pred EE
Q 039636 114 AL 115 (129)
Q Consensus 114 vv 115 (129)
++
T Consensus 302 v~ 303 (303)
T cd08251 302 VV 303 (303)
T ss_pred eC
Confidence 74
|
Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a |
| >cd05281 TDH Threonine dehydrogenase | Back alignment and domain information |
|---|
Probab=98.66 E-value=3.4e-07 Score=66.94 Aligned_cols=112 Identities=25% Similarity=0.269 Sum_probs=75.1
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc------------------------------ccEEEec
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------------------GQNARCS 49 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~------------------------------G~~v~~G 49 (129)
+|+ +|++++++++|.+.++ ++|++++++++. .++. .+.+ |+++.+|
T Consensus 186 ~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g 262 (341)
T cd05281 186 AGASLVIASDPNPYRLELAK-KMGADVVINPRE-EDVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILG 262 (341)
T ss_pred cCCcEEEEECCCHHHHHHHH-HhCcceeeCccc-ccHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEc
Confidence 477 6888888888888887 899999988765 4554 3322 6777666
Q ss_pred CCCCCC-CC-CCcceeccc--------chHHHHHHHHHHHHcCCcee--eeeeecCcccHHHHHHHHHcCCccceEEEE
Q 039636 50 ASKHET-PR-ENCSMWNDL--------TYSKFLDVVLPLIREGKIVY--VEDIVEGLENAPAALLGLFSGRNVGKQALD 116 (129)
Q Consensus 50 ~~~~~~-~~-~~~l~~~~~--------~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~ 116 (129)
...... .. .+.++.+.. ...+.++++++++.+|.+.+ .+...++++++++|++.+.+++ .||+|++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~ 340 (341)
T cd05281 263 LPPGPVDIDLNNLVIFKGLTVQGITGRKMFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLY 340 (341)
T ss_pred cCCCCcccccchhhhccceEEEEEecCCcchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCC-CceEEec
Confidence 411110 00 000111111 23456788999999999863 3334579999999999999998 9999875
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. |
| >TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family | Back alignment and domain information |
|---|
Probab=98.65 E-value=5.9e-07 Score=64.96 Aligned_cols=114 Identities=18% Similarity=0.257 Sum_probs=76.6
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccH-HHHhc------------------------c-ccEEEecCCCCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDL-VTALK------------------------R-GQNARCSASKHE 54 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~-~~~v~------------------------~-G~~v~~G~~~~~ 54 (129)
+|++|+++++++++.+.++ ++|+++++++++ .+. ...+. . |+++.+|..+..
T Consensus 169 ~G~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~ 246 (323)
T TIGR02823 169 LGYEVVASTGKAEEEDYLK-ELGASEVIDRED-LSPPGKPLEKERWAGAVDTVGGHTLANVLAQLKYGGAVAACGLAGGP 246 (323)
T ss_pred cCCeEEEEeCCHHHHHHHH-hcCCcEEEcccc-HHHHHHHhcCCCceEEEECccHHHHHHHHHHhCCCCEEEEEcccCCC
Confidence 4889999998998889887 899999888654 222 11110 0 888888752211
Q ss_pred CCC--------CC-cceeccc------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEEe
Q 039636 55 TPR--------EN-CSMWNDL------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDL 117 (129)
Q Consensus 55 ~~~--------~~-~l~~~~~------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~ 117 (129)
... .+ .+..... ...+.++.+.+++..+.+.+... +++++++++|++.+.+++..||+|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~a~~~~~~~~~~~k~vv~~ 323 (323)
T TIGR02823 247 DLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPRNLESITR-EITLEELPEALEQILAGQHRGRTVVDV 323 (323)
T ss_pred CccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcCCCcCcee-eecHHHHHHHHHHHhCCCccceEEEeC
Confidence 100 11 1111000 22446777888888898876543 689999999999999999999999863
|
This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc. |
| >COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=98.65 E-value=2.5e-07 Score=68.44 Aligned_cols=115 Identities=20% Similarity=0.092 Sum_probs=77.2
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc------------------------------ccEEEec
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------------------GQNARCS 49 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~------------------------------G~~v~~G 49 (129)
+|| +||+++.+++|++++++.+|++.+++... ++....+.+ |+++.+|
T Consensus 191 ~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~-~~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vG 269 (350)
T COG1063 191 LGASVVIVVDRSPERLELAKEAGGADVVVNPSE-DDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVG 269 (350)
T ss_pred cCCceEEEeCCCHHHHHHHHHhCCCeEeecCcc-ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEe
Confidence 476 79999999999999983377787777654 333333322 8888888
Q ss_pred CCCCC--CCCCC-------cceeccc-chHHHHHHHHHHHHcCCceeeeee--ecCcccHHHHHHHHHcCCc-cceEEEE
Q 039636 50 ASKHE--TPREN-------CSMWNDL-TYSKFLDVVLPLIREGKIVYVEDI--VEGLENAPAALLGLFSGRN-VGKQALD 116 (129)
Q Consensus 50 ~~~~~--~~~~~-------~l~~~~~-~~~~~~~~~~~~~~~g~i~~~~~~--~~~l~~~~~a~~~~~~~~~-~Gkvvv~ 116 (129)
.+... ....+ .+..... .....++.+++++.+|.+.+..-. .++++++++|++.+.+++. .-|+++.
T Consensus 270 v~~~~~~~~~~~~~~~kel~l~gs~~~~~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~ 349 (350)
T COG1063 270 VYGGEDIPLPAGLVVSKELTLRGSLRPSGREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLK 349 (350)
T ss_pred ccCCccCccCHHHHHhcccEEEeccCCCCcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEec
Confidence 73222 11111 2222211 344578999999999999876433 3589999999999998554 5588875
|
|
| >cd08290 ETR 2-enoyl thioester reductase (ETR) | Back alignment and domain information |
|---|
Probab=98.64 E-value=6.6e-07 Score=65.22 Aligned_cols=115 Identities=23% Similarity=0.199 Sum_probs=78.1
Q ss_pred CCcEEEEEeCCh----HHHHHHHHhcCCCEEEeCCCcc---cHHHHhcc----------------------------ccE
Q 039636 1 MGCYVVGSAGSK----EKIERLKNKFAFDDAFNYKEEQ---DLVTALKR----------------------------GQN 45 (129)
Q Consensus 1 ~Ga~Vi~t~~s~----~k~~~~~~~lGad~vi~~~~~~---~~~~~v~~----------------------------G~~ 45 (129)
+|++|+++++++ ++.+.++ ++|+++++++++ . ++.+.+.. |++
T Consensus 170 ~g~~v~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~ 247 (341)
T cd08290 170 LGIKTINVVRDRPDLEELKERLK-ALGADHVLTEEE-LRSLLATELLKSAPGGRPKLALNCVGGKSATELARLLSPGGTM 247 (341)
T ss_pred cCCeEEEEEcCCCcchhHHHHHH-hcCCCEEEeCcc-cccccHHHHHHHHcCCCceEEEECcCcHhHHHHHHHhCCCCEE
Confidence 478899998876 6678887 899999998765 3 44333221 777
Q ss_pred EEecCCCCCC--CC------CC-cceecc---------c-chHHHHHHHHHHHHcCCceeeeeeec---CcccHHHHHHH
Q 039636 46 ARCSASKHET--PR------EN-CSMWND---------L-TYSKFLDVVLPLIREGKIVYVEDIVE---GLENAPAALLG 103 (129)
Q Consensus 46 v~~G~~~~~~--~~------~~-~l~~~~---------~-~~~~~~~~~~~~~~~g~i~~~~~~~~---~l~~~~~a~~~ 103 (129)
+.+|..+... .. .+ .+.... + .....+.++++++.+|.+.+....++ +++++.+|++.
T Consensus 248 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~ 327 (341)
T cd08290 248 VTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAPPVEKVTDDPLEEFKDALAN 327 (341)
T ss_pred EEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCCcccccccCCHHHHHHHHHH
Confidence 7776421111 00 01 111100 0 12236888999999999988755567 99999999999
Q ss_pred HHcCCccceEEEEe
Q 039636 104 LFSGRNVGKQALDL 117 (129)
Q Consensus 104 ~~~~~~~Gkvvv~~ 117 (129)
+.+++..||+|+.+
T Consensus 328 ~~~~~~~~k~v~~~ 341 (341)
T cd08290 328 ALKGGGGGKQVLVM 341 (341)
T ss_pred HhhcCCCCeEEEeC
Confidence 99999999999864
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f |
| >cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=98.64 E-value=4.7e-07 Score=66.41 Aligned_cols=113 Identities=18% Similarity=0.103 Sum_probs=76.0
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc------------------------------ccEEEec
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------------------GQNARCS 49 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~------------------------------G~~v~~G 49 (129)
+|+ .++++++++++.+++. ++|+++++++.+ .++.+.+.+ |+++.+|
T Consensus 197 ~G~~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~-~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g 274 (350)
T cd08256 197 KNPKKLIVLDLKDERLALAR-KFGADVVLNPPE-VDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFS 274 (350)
T ss_pred cCCcEEEEEcCCHHHHHHHH-HcCCcEEecCCC-cCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEc
Confidence 476 4777888888888887 899999998765 455444332 6666666
Q ss_pred CCCCCCCCCC-cc-eecc------cchHHHHHHHHHHHHcCCceee--eeeecCcccHHHHHHHHHcCCccceEEE
Q 039636 50 ASKHETPREN-CS-MWND------LTYSKFLDVVLPLIREGKIVYV--EDIVEGLENAPAALLGLFSGRNVGKQAL 115 (129)
Q Consensus 50 ~~~~~~~~~~-~l-~~~~------~~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~Gkvvv 115 (129)
.......... .+ ..+. ......++++++++.+|.+++. +..+++++++++|++.+++++..||+|+
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 275 VFGDPVTVDWSIIGDRKELDVLGSHLGPYCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred cCCCCCccChhHhhcccccEEEEeccCchhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 4211100000 01 0111 1223467889999999999874 4556899999999999999988999874
|
This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, |
| >cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=98.63 E-value=7.8e-07 Score=65.03 Aligned_cols=115 Identities=19% Similarity=0.219 Sum_probs=79.1
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~ 51 (129)
+|++|+++++++++.+.++ .+|++++++++...++...+.+ |+++.+|..
T Consensus 188 ~G~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~ 266 (345)
T cd08260 188 LGARVIAVDIDDDKLELAR-ELGAVATVNASEVEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLT 266 (345)
T ss_pred cCCeEEEEeCCHHHHHHHH-HhCCCEEEccccchhHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCc
Confidence 4789999999999999997 8999999987641233322211 778877752
Q ss_pred CCCC--CCCC--cceecc-------cchHHHHHHHHHHHHcCCceee--eeeecCcccHHHHHHHHHcCCccceEEEE
Q 039636 52 KHET--PREN--CSMWND-------LTYSKFLDVVLPLIREGKIVYV--EDIVEGLENAPAALLGLFSGRNVGKQALD 116 (129)
Q Consensus 52 ~~~~--~~~~--~l~~~~-------~~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~ 116 (129)
.... ...+ .++.+. ......++++++++.+|.+.+. +...++++++++|++.+..++..||+|++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 267 LGEEAGVALPMDRVVARELEIVGSHGMPAHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred CCCCCccccCHHHHhhcccEEEeCCcCCHHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 1111 0000 111111 1345678899999999998764 34457999999999999999999999864
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty |
| >cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Probab=98.63 E-value=4.7e-07 Score=66.13 Aligned_cols=113 Identities=12% Similarity=0.200 Sum_probs=76.6
Q ss_pred CCcE-EEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc------------------------------ccEEEec
Q 039636 1 MGCY-VVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------------------GQNARCS 49 (129)
Q Consensus 1 ~Ga~-Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~------------------------------G~~v~~G 49 (129)
+|++ |+++++++++.++++ ++|+++++++++ .++.+.+.+ |+++.+|
T Consensus 191 ~G~~~v~~~~~~~~~~~~~~-~~ga~~v~~~~~-~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g 268 (345)
T cd08287 191 LGAERIIAMSRHEDRQALAR-EFGATDIVAERG-EEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVG 268 (345)
T ss_pred cCCCEEEEECCCHHHHHHHH-HcCCceEecCCc-ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEec
Confidence 4774 888888888888887 899999999876 566555443 5666555
Q ss_pred CCCCCC-CCCCcceecc------c-chHHHHHHHHHHHHcCCceee--eeeecCcccHHHHHHHHHcCCccceEEEE
Q 039636 50 ASKHET-PRENCSMWND------L-TYSKFLDVVLPLIREGKIVYV--EDIVEGLENAPAALLGLFSGRNVGKQALD 116 (129)
Q Consensus 50 ~~~~~~-~~~~~l~~~~------~-~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~ 116 (129)
...... ...+..+.+. . ...+.++++++++.+|.+++. +..+++++++.+|++.+..+... |++|+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~ 344 (345)
T cd08287 269 VPHGGVELDVRELFFRNVGLAGGPAPVRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAI-KVLLR 344 (345)
T ss_pred ccCCCCccCHHHHHhcceEEEEecCCcHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCce-EEEeC
Confidence 421111 0000111111 1 446688999999999999863 34558999999999998876654 88874
|
This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=98.62 E-value=4.9e-07 Score=65.37 Aligned_cols=114 Identities=18% Similarity=0.229 Sum_probs=70.5
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc----------------------------ccEEEecCCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR----------------------------GQNARCSASK 52 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~----------------------------G~~v~~G~~~ 52 (129)
+|++|+++++++++.+.++ ++|+++++++++ . ..+.+.+ |+++.+|..+
T Consensus 170 ~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~-~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~i~~g~~~ 246 (326)
T cd08289 170 LGYEVVASTGKADAADYLK-KLGAKEVIPREE-L-QEESIKPLEKQRWAGAVDPVGGKTLAYLLSTLQYGGSVAVSGLTG 246 (326)
T ss_pred CCCeEEEEecCHHHHHHHH-HcCCCEEEcchh-H-HHHHHHhhccCCcCEEEECCcHHHHHHHHHHhhcCCEEEEEeecC
Confidence 4889999999999999997 899999998764 2 2222111 8888887521
Q ss_pred CCCCC--------CC-cceeccc------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEEe
Q 039636 53 HETPR--------EN-CSMWNDL------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDL 117 (129)
Q Consensus 53 ~~~~~--------~~-~l~~~~~------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~ 117 (129)
..... .+ .+..... ...+.++.+...+..+.+.+.+..+++++++.+|++.+.+++..||+|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 247 GGEVETTVFPFILRGVNLLGIDSVECPMELRRRIWRRLATDLKPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred CCCCCcchhhhhhccceEEEEEeEecCchHHHHHHHHHHhhcCccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence 11100 11 1111100 112233334433332333333455689999999999999999999999864
|
yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH |
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.3e-06 Score=63.10 Aligned_cols=114 Identities=31% Similarity=0.451 Sum_probs=78.0
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~ 51 (129)
+|++|+.++.++++.+.++ .+|.+.+++..+ .++.+.+.+ |+++.+|..
T Consensus 190 ~g~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~i~~~g~~~~~~~~~~l~~~G~~v~~~~~ 267 (342)
T cd08266 190 FGATVIATAGSEDKLERAK-ELGADYVIDYRK-EDFVREVRELTGKRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGAT 267 (342)
T ss_pred cCCEEEEEeCCHHHHHHHH-HcCCCeEEecCC-hHHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHhhcCCEEEEEecC
Confidence 4788999998888888886 788877777654 344332221 777777652
Q ss_pred CCCCCCCC--cceecc-------cchHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEE
Q 039636 52 KHETPREN--CSMWND-------LTYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALD 116 (129)
Q Consensus 52 ~~~~~~~~--~l~~~~-------~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~ 116 (129)
.......+ ..+.+. ......+.++++++.++.+.+.+...++++++++|++.+.++...||++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 341 (342)
T cd08266 268 TGYEAPIDLRHVFWRQLSILGSTMGTKAELDEALRLVFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGKIVLT 341 (342)
T ss_pred CCCCCCcCHHHHhhcceEEEEEecCCHHHHHHHHHHHHcCCcccceeeeEcHHHHHHHHHHHHhCCCCceEEEe
Confidence 11111000 011111 134557788999999999987766668999999999999998888999986
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.1e-06 Score=63.73 Aligned_cols=114 Identities=34% Similarity=0.453 Sum_probs=78.8
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc----------------------------ccEEEecCCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR----------------------------GQNARCSASK 52 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~----------------------------G~~v~~G~~~ 52 (129)
+|++|+++++++++.+.++ ++|++.++++.. .++.+.+.+ |+++.+|..+
T Consensus 163 ~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~-~~~~~~~~~~~~~~vd~v~~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 240 (329)
T cd08250 163 AGCHVIGTCSSDEKAEFLK-SLGCDRPINYKT-EDLGEVLKKEYPKGVDVVYESVGGEMFDTCVDNLALKGRLIVIGFIS 240 (329)
T ss_pred cCCeEEEEeCcHHHHHHHH-HcCCceEEeCCC-ccHHHHHHHhcCCCCeEEEECCcHHHHHHHHHHhccCCeEEEEeccc
Confidence 4788999999999989887 899999988765 444433321 7888887521
Q ss_pred CC------------CCC-----CC-cceeccc-----chHHHHHHHHHHHHcCCceeeee--eecCcccHHHHHHHHHcC
Q 039636 53 HE------------TPR-----EN-CSMWNDL-----TYSKFLDVVLPLIREGKIVYVED--IVEGLENAPAALLGLFSG 107 (129)
Q Consensus 53 ~~------------~~~-----~~-~l~~~~~-----~~~~~~~~~~~~~~~g~i~~~~~--~~~~l~~~~~a~~~~~~~ 107 (129)
.. ... .+ .+..... ...+.++++++++.+|.+.+... .+++++++.+|++.+..+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~ 320 (329)
T cd08250 241 GYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSG 320 (329)
T ss_pred CCcccCcccccccccccHHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcC
Confidence 10 000 00 1111111 13566788999999999988543 237999999999999998
Q ss_pred CccceEEEE
Q 039636 108 RNVGKQALD 116 (129)
Q Consensus 108 ~~~Gkvvv~ 116 (129)
+..||+|++
T Consensus 321 ~~~~kvvv~ 329 (329)
T cd08250 321 KNIGKVVVE 329 (329)
T ss_pred CCCceEEeC
Confidence 888999863
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >cd05278 FDH_like Formaldehyde dehydrogenases | Back alignment and domain information |
|---|
Probab=98.61 E-value=1e-06 Score=64.29 Aligned_cols=114 Identities=19% Similarity=0.163 Sum_probs=77.8
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc------------------------------ccEEEec
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------------------GQNARCS 49 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~------------------------------G~~v~~G 49 (129)
+|+ .|+++++++++.+.++ ++|++.++++++ .++.+.+++ |+++.+|
T Consensus 190 ~g~~~v~~~~~~~~~~~~~~-~~g~~~vi~~~~-~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g 267 (347)
T cd05278 190 LGAARIIAVDSNPERLDLAK-EAGATDIINPKN-GDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVG 267 (347)
T ss_pred cCCCEEEEEeCCHHHHHHHH-HhCCcEEEcCCc-chHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEc
Confidence 365 7888888888888887 899999998876 555444332 6777666
Q ss_pred CCCCCCC--CCCcceeccc-------chHHHHHHHHHHHHcCCceee--eeeecCcccHHHHHHHHHcCCc-cceEEEE
Q 039636 50 ASKHETP--RENCSMWNDL-------TYSKFLDVVLPLIREGKIVYV--EDIVEGLENAPAALLGLFSGRN-VGKQALD 116 (129)
Q Consensus 50 ~~~~~~~--~~~~l~~~~~-------~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~-~Gkvvv~ 116 (129)
....... ....++.+.. ...+.++++++++.+|.+++. ....++++++.+|++.+..++. .+|+|++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~ 346 (347)
T cd05278 268 VYGKPDPLPLLGEWFGKNLTFKTGLVPVRARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIR 346 (347)
T ss_pred CCCCCcccCccchhhhceeEEEeeccCchhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEec
Confidence 4211110 0001111111 225678999999999999864 3445799999999999998877 7899875
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall |
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.1e-06 Score=62.89 Aligned_cols=114 Identities=25% Similarity=0.251 Sum_probs=78.9
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~ 51 (129)
+|++|+++++++++.+.++ ++|+++++++.. .++.+.+.+ |+++.+|..
T Consensus 168 ~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~~~~ 245 (325)
T cd08253 168 AGARVIATASSAEGAELVR-QAGADAVFNYRA-EDLADRILAATAGQGVDVIIEVLANVNLAKDLDVLAPGGRIVVYGSG 245 (325)
T ss_pred cCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCC-cCHHHHHHHHcCCCceEEEEECCchHHHHHHHHhhCCCCEEEEEeec
Confidence 4789999999999999887 899999998765 555444432 666666541
Q ss_pred CCCC-CCCCcceec------------cc-chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEE
Q 039636 52 KHET-PRENCSMWN------------DL-TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALD 116 (129)
Q Consensus 52 ~~~~-~~~~~l~~~------------~~-~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~ 116 (129)
+... ...+.++.. .+ ...+.++.+.+++..+.+++.....+++++++++++.+.++...||++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~ 324 (325)
T cd08253 246 GLRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALRPVIAREYPLEEAAAAHEAVESGGAIGKVVLD 324 (325)
T ss_pred CCcCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCccCccccEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence 1100 000010111 01 33556777888899999887755668999999999999999999999975
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.1e-06 Score=63.44 Aligned_cols=114 Identities=17% Similarity=0.206 Sum_probs=76.7
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHH-HHhc------------------------c-ccEEEecCCCCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLV-TALK------------------------R-GQNARCSASKHE 54 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~-~~v~------------------------~-G~~v~~G~~~~~ 54 (129)
+|++||+++++++|.+.++ ++|+++++++++ .+.. ..+. . |+++.+|.....
T Consensus 170 ~G~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~G~~~~~ 247 (324)
T cd08288 170 LGYEVVASTGRPEEADYLR-SLGASEIIDRAE-LSEPGRPLQKERWAGAVDTVGGHTLANVLAQTRYGGAVAACGLAGGA 247 (324)
T ss_pred CCCeEEEEeCCHHHHHHHH-hcCCCEEEEcch-hhHhhhhhccCcccEEEECCcHHHHHHHHHHhcCCCEEEEEEecCCC
Confidence 5889999999999999997 999999998764 2221 0000 0 555565542110
Q ss_pred C--CC------CC-cceeccc------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEEe
Q 039636 55 T--PR------EN-CSMWNDL------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDL 117 (129)
Q Consensus 55 ~--~~------~~-~l~~~~~------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~ 117 (129)
. .. ++ .+..... ...+.++.+.+++..+.+.+. ...++++++++|++.+.+++..||+|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 248 DLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDPALLEAL-TREIPLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred CCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhcCCcccc-ceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence 0 00 01 1111000 235577888889999988765 44589999999999999999999999864
|
Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal |
| >cd08232 idonate-5-DH L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.1e-06 Score=64.07 Aligned_cols=115 Identities=17% Similarity=0.166 Sum_probs=77.1
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhc-------------------c--------ccEEEecCCC
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALK-------------------R--------GQNARCSASK 52 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~-------------------~--------G~~v~~G~~~ 52 (129)
+|+ +|+++++++++.+.++ ++|+++++++++ .++.+... + |+++.+|..+
T Consensus 188 ~G~~~v~~~~~s~~~~~~~~-~~g~~~vi~~~~-~~~~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~ 265 (339)
T cd08232 188 AGAAEIVATDLADAPLAVAR-AMGADETVNLAR-DPLAAYAADKGDFDVVFEASGAPAALASALRVVRPGGTVVQVGMLG 265 (339)
T ss_pred cCCcEEEEECCCHHHHHHHH-HcCCCEEEcCCc-hhhhhhhccCCCccEEEECCCCHHHHHHHHHHHhcCCEEEEEecCC
Confidence 477 7899988888888776 899999998764 32211110 0 7777776422
Q ss_pred CCCCCC-Ccceeccc------chHHHHHHHHHHHHcCCceee--eeeecCcccHHHHHHHHHcCCccceEEEEe
Q 039636 53 HETPRE-NCSMWNDL------TYSKFLDVVLPLIREGKIVYV--EDIVEGLENAPAALLGLFSGRNVGKQALDL 117 (129)
Q Consensus 53 ~~~~~~-~~l~~~~~------~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~ 117 (129)
...... ..++.+.. ...+.++++++++..|.+++. +..+++++++++|++.+..+...||+|+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 266 GPVPLPLNALVAKELDLRGSFRFDDEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred CCccCcHHHHhhcceEEEEEecCHHHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 111100 01111111 345578889999999998643 445689999999999999988899999864
|
L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai |
| >cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.7e-06 Score=61.92 Aligned_cols=116 Identities=21% Similarity=0.198 Sum_probs=78.2
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCC---------------cccHHHHhc---c-ccEEEecCCCCCCCC--CC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKE---------------EQDLVTALK---R-GQNARCSASKHETPR--EN 59 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~---------------~~~~~~~v~---~-G~~v~~G~~~~~~~~--~~ 59 (129)
+|++|+++++++++.+.++ ++|++.+++... ...+...++ . |+++.+|..+..... ..
T Consensus 156 ~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~ 234 (305)
T cd08270 156 AGAHVVAVVGSPARAEGLR-ELGAAEVVVGGSELSGAPVDLVVDSVGGPQLARALELLAPGGTVVSVGSSSGEPAVFNPA 234 (305)
T ss_pred cCCEEEEEeCCHHHHHHHH-HcCCcEEEeccccccCCCceEEEECCCcHHHHHHHHHhcCCCEEEEEeccCCCcccccHH
Confidence 4789999999999999997 798865543211 011111111 1 899998862211111 00
Q ss_pred ccee--ccc-----------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEEe
Q 039636 60 CSMW--NDL-----------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDL 117 (129)
Q Consensus 60 ~l~~--~~~-----------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~ 117 (129)
.+.. ++. ...+.++.+++++.+|.+++.+..+++++++++|++.+.+++..||+|+.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 235 AFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLDPRIGWRGSWTEIDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred HHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCCccceeccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 1111 011 235678899999999999887666789999999999999999999999864
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Probab=98.57 E-value=9.6e-07 Score=64.56 Aligned_cols=115 Identities=13% Similarity=0.091 Sum_probs=75.6
Q ss_pred CC-cEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc------------------------------ccEEEec
Q 039636 1 MG-CYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------------------GQNARCS 49 (129)
Q Consensus 1 ~G-a~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~------------------------------G~~v~~G 49 (129)
+| ++|++++++++|...++ ++|+++++++.+ .++.+.+.+ |+++.+|
T Consensus 189 ~G~~~v~~~~~~~~~~~~~~-~~g~~~~v~~~~-~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g 266 (345)
T cd08286 189 YSPSKIIMVDLDDNRLEVAK-KLGATHTVNSAK-GDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVG 266 (345)
T ss_pred cCCCeEEEEcCCHHHHHHHH-HhCCCceecccc-ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEec
Confidence 46 68888888888888887 899999998875 455443322 6676666
Q ss_pred CCCCCCCC-CCcceeccc------chHHHHHHHHHHHHcCCceee--eeeecCcccHHHHHHHHHcCCc--cceEEEEe
Q 039636 50 ASKHETPR-ENCSMWNDL------TYSKFLDVVLPLIREGKIVYV--EDIVEGLENAPAALLGLFSGRN--VGKQALDL 117 (129)
Q Consensus 50 ~~~~~~~~-~~~l~~~~~------~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~--~Gkvvv~~ 117 (129)
........ ...++.+.. .....++++++++.+|.+.+. +..+++++++.+|++.+..... ..|+||++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 267 VHGKPVDLHLEKLWIKNITITTGLVDTNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred ccCCCCCcCHHHHhhcCcEEEeecCchhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 41111100 001122221 112567889999999998764 3456899999999999987643 45998863
|
This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers ( |
| >cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2 | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.5e-06 Score=63.47 Aligned_cols=112 Identities=21% Similarity=0.277 Sum_probs=74.5
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc------------------------------ccEEEec
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------------------GQNARCS 49 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~------------------------------G~~v~~G 49 (129)
+|+ +|+++++++++.+.++ ++|++ +++++. .++.+.+.+ |+++.+|
T Consensus 190 ~g~~~v~~~~~~~~~~~~~~-~~g~~-~~~~~~-~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g 266 (344)
T cd08284 190 LGAARVFAVDPVPERLERAA-ALGAE-PINFED-AEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVG 266 (344)
T ss_pred cCCceEEEEcCCHHHHHHHH-HhCCe-EEecCC-cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEC
Confidence 476 7999988888888887 88875 455554 444443322 7777777
Q ss_pred CCCCCCCC--------CC-cceecccchHHHHHHHHHHHHcCCceee--eeeecCcccHHHHHHHHHcCCccceEEEE
Q 039636 50 ASKHETPR--------EN-CSMWNDLTYSKFLDVVLPLIREGKIVYV--EDIVEGLENAPAALLGLFSGRNVGKQALD 116 (129)
Q Consensus 50 ~~~~~~~~--------~~-~l~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~ 116 (129)
..+..... .+ .+........+.++++++++.++.+.+. +..++++++++++++.+..++. ||+|+.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~ 343 (344)
T cd08284 267 VHTAEEFPFPGLDAYNKNLTLRFGRCPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLD 343 (344)
T ss_pred cCCCCCccccHHHHhhcCcEEEEecCCcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCc-eEEEec
Confidence 52211100 01 1111101456678999999999998763 4455899999999999998877 999874
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical |
| >cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.6e-06 Score=64.13 Aligned_cols=113 Identities=22% Similarity=0.293 Sum_probs=75.5
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecC
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSA 50 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~ 50 (129)
+|+ .|++++.+++|.+.++ ++|+++++++++ .++.+.+.+ |+++.+|.
T Consensus 209 ~G~~~v~~~~~~~~k~~~~~-~~g~~~~i~~~~-~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~ 286 (365)
T cd08278 209 AGCTTIIAVDIVDSRLELAK-ELGATHVINPKE-EDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGA 286 (365)
T ss_pred cCCCeEEEEeCCHHHHHHHH-HcCCcEEecCCC-cCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCc
Confidence 477 5899988999999887 899999998876 555544321 77777765
Q ss_pred CCC-CCCCCC--cceeccc----------chHHHHHHHHHHHHcCCcee-eeeeecCcccHHHHHHHHHcCCccceEEEE
Q 039636 51 SKH-ETPREN--CSMWNDL----------TYSKFLDVVLPLIREGKIVY-VEDIVEGLENAPAALLGLFSGRNVGKQALD 116 (129)
Q Consensus 51 ~~~-~~~~~~--~l~~~~~----------~~~~~~~~~~~~~~~g~i~~-~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~ 116 (129)
.+. .....+ .++.+.. ...+.++++++++.+|.+.+ .+...++++++.+|++.+.+++.. |+|++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~ 365 (365)
T cd08278 287 PPPGAEVTLDVNDLLVSGKTIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKVI-KPVLR 365 (365)
T ss_pred CCCCCccccCHHHHhhcCceEEEeecCCcChHHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCce-EEEEC
Confidence 211 110000 1111111 22567788999999999854 233458999999999999987654 77763
|
Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu |
| >cd05285 sorbitol_DH Sorbitol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.3e-06 Score=63.95 Aligned_cols=113 Identities=19% Similarity=0.210 Sum_probs=74.5
Q ss_pred CCcE-EEEEeCChHHHHHHHHhcCCCEEEeCCCcccH---HHHhcc------------------------------ccEE
Q 039636 1 MGCY-VVGSAGSKEKIERLKNKFAFDDAFNYKEEQDL---VTALKR------------------------------GQNA 46 (129)
Q Consensus 1 ~Ga~-Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~---~~~v~~------------------------------G~~v 46 (129)
+|++ |+++++++++.++++ ++|+++++++++ .++ .+.+.+ |+++
T Consensus 185 ~G~~~v~~~~~~~~~~~~~~-~~g~~~vi~~~~-~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v 262 (343)
T cd05285 185 FGATKVVVTDIDPSRLEFAK-ELGATHTVNVRT-EDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPGGTVV 262 (343)
T ss_pred cCCcEEEEECCCHHHHHHHH-HcCCcEEecccc-ccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEE
Confidence 4776 899988899999887 899999998875 442 333322 6666
Q ss_pred EecCCCCCCCCCC-cceeccc------chHHHHHHHHHHHHcCCce--eeeeeecCcccHHHHHHHHHcCC-ccceEEE
Q 039636 47 RCSASKHETPREN-CSMWNDL------TYSKFLDVVLPLIREGKIV--YVEDIVEGLENAPAALLGLFSGR-NVGKQAL 115 (129)
Q Consensus 47 ~~G~~~~~~~~~~-~l~~~~~------~~~~~~~~~~~~~~~g~i~--~~~~~~~~l~~~~~a~~~~~~~~-~~Gkvvv 115 (129)
.+|.......... .+..+.. ...+.++++++++.++.+. +.+..+++++++.+|++.+.+++ ..+|++|
T Consensus 263 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 263 LVGMGKPEVTLPLSAASLREIDIRGVFRYANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred EEccCCCCCccCHHHHhhCCcEEEEeccChHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 6654111100000 0111111 2336788899999999875 33445689999999999999874 4599988
|
Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.8e-06 Score=64.29 Aligned_cols=112 Identities=18% Similarity=0.102 Sum_probs=74.1
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCcc---cHHHHhcc-------------------------------ccE
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEEQ---DLVTALKR-------------------------------GQN 45 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~---~~~~~v~~-------------------------------G~~ 45 (129)
+|+ +|+++++++++.++++ ++|+++++++++ . ++.+.+++ |++
T Consensus 226 ~G~~~vi~~~~~~~~~~~~~-~~g~~~~v~~~~-~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~ 303 (384)
T cd08265 226 AGASKVIAFEISEERRNLAK-EMGADYVFNPTK-MRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKI 303 (384)
T ss_pred cCCCEEEEEcCCHHHHHHHH-HcCCCEEEcccc-cccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEE
Confidence 477 7999998898888887 899999998764 2 44443332 666
Q ss_pred EEecCCCCCCCC-------CC-cceeccc-chHHHHHHHHHHHHcCCceee--eeeecCcccHHHHHHHHHcCCccceEE
Q 039636 46 ARCSASKHETPR-------EN-CSMWNDL-TYSKFLDVVLPLIREGKIVYV--EDIVEGLENAPAALLGLFSGRNVGKQA 114 (129)
Q Consensus 46 v~~G~~~~~~~~-------~~-~l~~~~~-~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~Gkvv 114 (129)
+.+|........ .. .+..... .....++++++++.+|.+.+. +..+|+++++.+|++.+.++ ..||+|
T Consensus 304 v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvv 382 (384)
T cd08265 304 VYIGRAATTVPLHLEVLQVRRAQIVGAQGHSGHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASER-TDGKIT 382 (384)
T ss_pred EEECCCCCCCcccHHHHhhCceEEEEeeccCCcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEE
Confidence 666541111100 00 1111111 233468889999999999764 34458999999999997654 578988
Q ss_pred E
Q 039636 115 L 115 (129)
Q Consensus 115 v 115 (129)
+
T Consensus 383 v 383 (384)
T cd08265 383 I 383 (384)
T ss_pred e
Confidence 5
|
This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi |
| >cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.3e-06 Score=64.12 Aligned_cols=114 Identities=15% Similarity=0.148 Sum_probs=69.0
Q ss_pred cEEEEEeCChHHHHHHHHhc-------------CCCEEEeCCCc---c-cHHHHhcc----ccEEEecCCCCCCC-CCCc
Q 039636 3 CYVVGSAGSKEKIERLKNKF-------------AFDDAFNYKEE---Q-DLVTALKR----GQNARCSASKHETP-RENC 60 (129)
Q Consensus 3 a~Vi~t~~s~~k~~~~~~~l-------------Gad~vi~~~~~---~-~~~~~v~~----G~~v~~G~~~~~~~-~~~~ 60 (129)
++|++++.+++|+++++ .+ |+|.+||.... + .+...++- |+++.+|....... ....
T Consensus 190 ~~vi~~~~~~~k~~~a~-~~~~~~~~~~~~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~ 268 (341)
T cd08237 190 SKLVVFGKHQEKLDLFS-FADETYLIDDIPEDLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYPVPINTRM 268 (341)
T ss_pred CcEEEEeCcHhHHHHHh-hcCceeehhhhhhccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCCCcccCHHH
Confidence 57999999999988876 44 34566664430 1 12322222 99999986322111 1012
Q ss_pred ceeccc-------chHHHHHHHHHHHHcC-----CceeeeeeecCcccH---HHHHHHHHcCCccceEEEEeC
Q 039636 61 SMWNDL-------TYSKFLDVVLPLIREG-----KIVYVEDIVEGLENA---PAALLGLFSGRNVGKQALDLD 118 (129)
Q Consensus 61 l~~~~~-------~~~~~~~~~~~~~~~g-----~i~~~~~~~~~l~~~---~~a~~~~~~~~~~Gkvvv~~~ 118 (129)
++.++. ...+.++++++++.+| .+++.+..+|+|+++ .+|++.+.++ ..||+||.++
T Consensus 269 ~~~k~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~~ 340 (341)
T cd08237 269 VLEKGLTLVGSSRSTREDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEWE 340 (341)
T ss_pred HhhCceEEEEecccCHHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEee
Confidence 222222 2345689999999998 466666666888654 5555554444 6899999874
|
NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase ( |
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=98.49 E-value=3e-06 Score=61.20 Aligned_cols=112 Identities=27% Similarity=0.320 Sum_probs=75.7
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc--------------------------ccEEEecCCCCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR--------------------------GQNARCSASKHE 54 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~--------------------------G~~v~~G~~~~~ 54 (129)
+|++|+++++++++.+.+. ++|++++++..+ +.+.+.+ |+++.+|.....
T Consensus 186 ~g~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~g~~~~~ 261 (332)
T cd08259 186 LGARVIAVTRSPEKLKILK-ELGADYVIDGSK---FSEDVKKLGGADVVIELVGSPTIEESLRSLNKGGRLVLIGNVTPD 261 (332)
T ss_pred cCCeEEEEeCCHHHHHHHH-HcCCcEEEecHH---HHHHHHhccCCCEEEECCChHHHHHHHHHhhcCCEEEEEcCCCCC
Confidence 4788999998888888776 778777775431 2222211 788877752111
Q ss_pred CC--C------CC-cceecccchHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEE
Q 039636 55 TP--R------EN-CSMWNDLTYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALD 116 (129)
Q Consensus 55 ~~--~------~~-~l~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~ 116 (129)
.. . .+ .+........+.++++++++.+|.+++.+...++++++++|++.+.+++..||+|++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 262 PAPLRPGLLILKEIRIIGSISATKADVEEALKLVKEGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred CcCCCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCCccceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 10 0 00 111100134667889999999999987766668999999999999999989999874
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=98.49 E-value=1.5e-06 Score=63.39 Aligned_cols=114 Identities=18% Similarity=0.111 Sum_probs=74.2
Q ss_pred CCcE-EEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHH---Hhcc------------------------------ccEE
Q 039636 1 MGCY-VVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVT---ALKR------------------------------GQNA 46 (129)
Q Consensus 1 ~Ga~-Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~---~v~~------------------------------G~~v 46 (129)
+|++ ++++++++++.++++ ++|++++++++. .+..+ .+.+ |+++
T Consensus 184 ~G~~~v~~~~~~~~~~~~~~-~~g~~~~i~~~~-~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v 261 (341)
T cd08262 184 RGVGPIVASDFSPERRALAL-AMGADIVVDPAA-DSPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIV 261 (341)
T ss_pred cCCcEEEEECCCHHHHHHHH-HcCCcEEEcCCC-cCHHHHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEE
Confidence 4775 666667888888887 899999998765 32111 1110 6666
Q ss_pred EecCCCCCC-CCCCcceeccc-------chHHHHHHHHHHHHcCCceee--eeeecCcccHHHHHHHHHcCCccceEEEE
Q 039636 47 RCSASKHET-PRENCSMWNDL-------TYSKFLDVVLPLIREGKIVYV--EDIVEGLENAPAALLGLFSGRNVGKQALD 116 (129)
Q Consensus 47 ~~G~~~~~~-~~~~~l~~~~~-------~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~ 116 (129)
.+|..+... ......+.+.. ...+.++++++++.+|.+.+. +..+++++++++|++.+.+++..||+|++
T Consensus 262 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 262 VVGVCMESDNIEPALAIRKELTLQFSLGYTPEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred EECCCCCCCccCHHHHhhcceEEEEEecccHHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 666421111 00000001111 234578889999999999764 24568999999999999999999999874
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i |
| >PRK13771 putative alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=2.2e-06 Score=62.33 Aligned_cols=115 Identities=20% Similarity=0.223 Sum_probs=74.5
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCC-------------------CcccHHHHhc---c-ccEEEecCCCCCCC-
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYK-------------------EEQDLVTALK---R-GQNARCSASKHETP- 56 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~-------------------~~~~~~~~v~---~-G~~v~~G~~~~~~~- 56 (129)
+|++|+++++++++.+.++ ++ ++++++++ ....+...++ . |+++.+|..+....
T Consensus 186 ~g~~vi~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~v~~~~~~d~~ld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~ 263 (334)
T PRK13771 186 LGAKVIAVTSSESKAKIVS-KY-ADYVIVGSKFSEEVKKIGGADIVIETVGTPTLEESLRSLNMGGKIIQIGNVDPSPTY 263 (334)
T ss_pred cCCEEEEEeCCHHHHHHHH-HH-HHHhcCchhHHHHHHhcCCCcEEEEcCChHHHHHHHHHHhcCCEEEEEeccCCCCCc
Confidence 4789999998888877765 55 54444432 1011111111 1 88988886221111
Q ss_pred -CC-Ccceecc------c-chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEEe
Q 039636 57 -RE-NCSMWND------L-TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDL 117 (129)
Q Consensus 57 -~~-~~l~~~~------~-~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~ 117 (129)
.. ..++.++ . ...+.++++++++.+|.+++.+...++++++.+|++.+.++...||+++..
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 264 SLRLGYIILKDIEIIGHISATKRDVEEALKLVAEGKIKPVIGAEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred ccCHHHHHhcccEEEEecCCCHHHHHHHHHHHHcCCCcceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 10 0011111 1 346778999999999999876666689999999999999988899999864
|
|
| >cd05195 enoyl_red enoyl reductase of polyketide synthase | Back alignment and domain information |
|---|
Probab=98.46 E-value=3.4e-06 Score=59.25 Aligned_cols=113 Identities=21% Similarity=0.298 Sum_probs=76.8
Q ss_pred CCcEEEEEeCChHHHHHHHHhcC--CCEEEeCCCcccHHHHhcc-----------------------------ccEEEec
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFA--FDDAFNYKEEQDLVTALKR-----------------------------GQNARCS 49 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lG--ad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G 49 (129)
+|++|+++++++++.+.++ .+| ++.++++.. .++.+.+.+ |+++.+|
T Consensus 132 ~g~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g 209 (293)
T cd05195 132 LGAEVFATVGSEEKREFLR-ELGGPVDHIFSSRD-LSFADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIG 209 (293)
T ss_pred cCCEEEEEeCCHHHHHHHH-HhCCCcceEeecCc-hhHHHHHHHHhCCCCceEEEeCCCchHHHHHHHhcccCceEEEee
Confidence 4789999999988888887 777 788888765 445444332 6666665
Q ss_pred CCCCC---CCCCC----cceeccc-----------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccc
Q 039636 50 ASKHE---TPREN----CSMWNDL-----------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVG 111 (129)
Q Consensus 50 ~~~~~---~~~~~----~l~~~~~-----------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~G 111 (129)
..... ..... ....... ...+.+.++++++.++.+++....++++++++++++.+..++..|
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 289 (293)
T cd05195 210 KRDILSNSKLGMRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAFRLMQSGKHIG 289 (293)
T ss_pred ccccccCCccchhhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHHHHHhcCCCCc
Confidence 41111 00000 0111110 224567889999999999877676789999999999999988888
Q ss_pred eEEE
Q 039636 112 KQAL 115 (129)
Q Consensus 112 kvvv 115 (129)
|+++
T Consensus 290 ~ivv 293 (293)
T cd05195 290 KVVL 293 (293)
T ss_pred eecC
Confidence 8874
|
Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase |
| >TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Probab=98.46 E-value=4.6e-06 Score=59.76 Aligned_cols=115 Identities=28% Similarity=0.336 Sum_probs=77.8
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~ 51 (129)
+|++|++++.++++.+.++ .+|++.+++... .++.+.+.+ |+++.+|..
T Consensus 163 ~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~g~~v~~g~~ 240 (325)
T TIGR02824 163 FGARVFTTAGSDEKCAACE-ALGADIAINYRE-EDFVEVVKAETGGKGVDVILDIVGGSYLNRNIKALALDGRIVQIGFQ 240 (325)
T ss_pred cCCEEEEEeCCHHHHHHHH-HcCCcEEEecCc-hhHHHHHHHHcCCCCeEEEEECCchHHHHHHHHhhccCcEEEEEecC
Confidence 4789999999888888886 899888887654 444443321 777777641
Q ss_pred CCC--CCC------CC-cceec---c-c------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccce
Q 039636 52 KHE--TPR------EN-CSMWN---D-L------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGK 112 (129)
Q Consensus 52 ~~~--~~~------~~-~l~~~---~-~------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gk 112 (129)
... ... ++ .+... . . .....+.++++++.++.+.+.+...++++++.++++.+.++...||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (325)
T TIGR02824 241 GGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPVIDKVFPLEDAAQAHALMESGDHIGK 320 (325)
T ss_pred CCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccCccccEEeHHHHHHHHHHHHhCCCcce
Confidence 111 100 01 11100 0 0 1244567788999999987765556899999999999999888999
Q ss_pred EEEEe
Q 039636 113 QALDL 117 (129)
Q Consensus 113 vvv~~ 117 (129)
+++++
T Consensus 321 ~v~~~ 325 (325)
T TIGR02824 321 IVLTV 325 (325)
T ss_pred EEEeC
Confidence 99864
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized. |
| >cd08252 AL_MDR Arginate lyase and other MDR family members | Back alignment and domain information |
|---|
Probab=98.45 E-value=5.4e-06 Score=60.16 Aligned_cols=113 Identities=23% Similarity=0.286 Sum_probs=76.5
Q ss_pred CC-cEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecC
Q 039636 1 MG-CYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSA 50 (129)
Q Consensus 1 ~G-a~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~ 50 (129)
+| ++|+++++++++.+.++ ++|+++++++.+ ++.+.+.. |+++.+|.
T Consensus 173 ~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~--~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~ 249 (336)
T cd08252 173 LTGLTVIATASRPESIAWVK-ELGADHVINHHQ--DLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVD 249 (336)
T ss_pred cCCcEEEEEcCChhhHHHHH-hcCCcEEEeCCc--cHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEEecC
Confidence 47 89999999999999997 899999998753 23222211 77777764
Q ss_pred CCCCCC-----CCC-ccee----c-----cc---chHHHHHHHHHHHHcCCceeeeee---ecCcccHHHHHHHHHcCCc
Q 039636 51 SKHETP-----REN-CSMW----N-----DL---TYSKFLDVVLPLIREGKIVYVEDI---VEGLENAPAALLGLFSGRN 109 (129)
Q Consensus 51 ~~~~~~-----~~~-~l~~----~-----~~---~~~~~~~~~~~~~~~g~i~~~~~~---~~~l~~~~~a~~~~~~~~~ 109 (129)
.+.... ..+ .+.. . +. ...+.++++++++.+|.+.+.+.. .++++++++|++.+.++..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 329 (336)
T cd08252 250 PQEPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKT 329 (336)
T ss_pred CCCcccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCc
Confidence 211000 011 1110 0 00 224678899999999999875332 3699999999999999999
Q ss_pred cceEEEE
Q 039636 110 VGKQALD 116 (129)
Q Consensus 110 ~Gkvvv~ 116 (129)
.||++++
T Consensus 330 ~~~vv~~ 336 (336)
T cd08252 330 IGKIVLE 336 (336)
T ss_pred cceEEeC
Confidence 9999863
|
This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil |
| >cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.44 E-value=3.5e-06 Score=62.27 Aligned_cols=112 Identities=19% Similarity=0.235 Sum_probs=75.5
Q ss_pred CCcE-EEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc------------------------------ccEEEec
Q 039636 1 MGCY-VVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------------------GQNARCS 49 (129)
Q Consensus 1 ~Ga~-Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~------------------------------G~~v~~G 49 (129)
+|++ |+++++++++.++++ ++|++++++++. .++...+.+ |+++.+|
T Consensus 205 ~G~~~Vi~~~~~~~~~~~~~-~~g~~~vv~~~~-~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g 282 (363)
T cd08279 205 AGASRIIAVDPVPEKLELAR-RFGATHTVNASE-DDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVG 282 (363)
T ss_pred cCCCcEEEEcCCHHHHHHHH-HhCCeEEeCCCC-ccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEe
Confidence 4775 999999999999887 899999998765 455443322 6777766
Q ss_pred CCCC-CCCCCC--cceecc----------cchHHHHHHHHHHHHcCCceee--eeeecCcccHHHHHHHHHcCCccceEE
Q 039636 50 ASKH-ETPREN--CSMWND----------LTYSKFLDVVLPLIREGKIVYV--EDIVEGLENAPAALLGLFSGRNVGKQA 114 (129)
Q Consensus 50 ~~~~-~~~~~~--~l~~~~----------~~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~Gkvv 114 (129)
.... .....+ .+.... ....+.++++++++.+|.+.+. +..+++++++.+|++.+.+++..+.++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 283 MGPPGETVSLPALELFLSEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred cCCCCcccccCHHHHhhcCcEEEEEEecCcCcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 4211 110001 111000 0346788999999999999763 445689999999999999888765554
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me |
| >cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=98.43 E-value=2.6e-06 Score=61.59 Aligned_cols=114 Identities=18% Similarity=0.128 Sum_probs=72.7
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCc---------------cc-HHH---Hhcc-ccEEEecCCCCCCCCC-C
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEE---------------QD-LVT---ALKR-GQNARCSASKHETPRE-N 59 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~---------------~~-~~~---~v~~-G~~v~~G~~~~~~~~~-~ 59 (129)
+|++|+++++++++.+.++ ++|++.++++... .. +.. .+.. |+++..|......... .
T Consensus 178 ~G~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~ 256 (319)
T cd08242 178 TGPDVVLVGRHSEKLALAR-RLGVETVLPDEAESEGGGFDVVVEATGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLT 256 (319)
T ss_pred cCCeEEEEcCCHHHHHHHH-HcCCcEEeCccccccCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCccCHH
Confidence 5889999999999999998 7999877766430 01 111 1111 7777655421111100 0
Q ss_pred cceeccc----chHHHHHHHHHHHHcCCc--eeeeeeecCcccHHHHHHHHHcCCccceEEEE
Q 039636 60 CSMWNDL----TYSKFLDVVLPLIREGKI--VYVEDIVEGLENAPAALLGLFSGRNVGKQALD 116 (129)
Q Consensus 60 ~l~~~~~----~~~~~~~~~~~~~~~g~i--~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~ 116 (129)
.++.++. .....++++++++.+|.| .+.+..+|+++++.+|++.+.++. .+|+|++
T Consensus 257 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~k~vi~ 318 (319)
T cd08242 257 KAVVNEITLVGSRCGPFAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPG-ALKVLLR 318 (319)
T ss_pred HheecceEEEEEecccHHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCC-ceEEEeC
Confidence 1222222 111137889999999999 445556689999999999998765 5899875
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta |
| >cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins | Back alignment and domain information |
|---|
Probab=98.42 E-value=6.2e-06 Score=59.83 Aligned_cols=112 Identities=20% Similarity=0.098 Sum_probs=76.4
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHH---------------------hc---c-ccEEEecCCCCCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTA---------------------LK---R-GQNARCSASKHET 55 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~---------------------v~---~-G~~v~~G~~~~~~ 55 (129)
+|++|+++++++++.+.++ ++|++.++++.. .++... ++ . |+++.+|......
T Consensus 185 ~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~ 262 (330)
T cd08245 185 MGFETVAITRSPDKRELAR-KLGADEVVDSGA-ELDEQAAAGGADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESPP 262 (330)
T ss_pred CCCEEEEEeCCHHHHHHHH-HhCCcEEeccCC-cchHHhccCCCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCCc
Confidence 4789999999999999886 899988887654 322211 00 0 7787776521111
Q ss_pred CCCC--cceeccc-------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEE
Q 039636 56 PREN--CSMWNDL-------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQAL 115 (129)
Q Consensus 56 ~~~~--~l~~~~~-------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv 115 (129)
...+ .++.++. .....++++++++.++.+.+.. ..++++++.+|++.+.++...||+|+
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 263 FSPDIFPLIMKRQSIAGSTHGGRADLQEALDFAAEGKVKPMI-ETFPLDQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred cccchHHHHhCCCEEEEeccCCHHHHHHHHHHHHcCCCcceE-EEEcHHHHHHHHHHHHcCCCCcceeC
Confidence 0010 1222221 2456788899999999998643 35899999999999999999999875
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an |
| >smart00829 PKS_ER Enoylreductase | Back alignment and domain information |
|---|
Probab=98.40 E-value=6.5e-06 Score=57.85 Aligned_cols=113 Identities=21% Similarity=0.322 Sum_probs=75.9
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCC--CEEEeCCCcccHHHHhcc-----------------------------ccEEEec
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAF--DDAFNYKEEQDLVTALKR-----------------------------GQNARCS 49 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGa--d~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G 49 (129)
+|++|+++++++++.+.++ ++|+ +.++++.. .++.+.+.+ |+++.+|
T Consensus 128 ~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g 205 (288)
T smart00829 128 LGAEVFATAGSPEKRDFLR-ELGIPDDHIFSSRD-LSFADEILRATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIG 205 (288)
T ss_pred cCCEEEEEeCCHHHHHHHH-HcCCChhheeeCCC-ccHHHHHHHHhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEc
Confidence 4789999999999999987 8998 78888766 555544432 6666665
Q ss_pred CCC---CCCCCCCc----ceeccc----------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccce
Q 039636 50 ASK---HETPRENC----SMWNDL----------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGK 112 (129)
Q Consensus 50 ~~~---~~~~~~~~----l~~~~~----------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gk 112 (129)
... ........ +..+.. .....+.++++++.++.+.+.....++++++.++++.+..++..||
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (288)
T smart00829 206 KRDIRDNSQLGMAPFRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYMQQGKHIGK 285 (288)
T ss_pred CcCCccccccchhhhcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHHhcCCCcce
Confidence 411 00000000 000000 1234567888999999987754456899999999999999888888
Q ss_pred EEE
Q 039636 113 QAL 115 (129)
Q Consensus 113 vvv 115 (129)
+++
T Consensus 286 ivv 288 (288)
T smart00829 286 VVL 288 (288)
T ss_pred EeC
Confidence 874
|
Enoylreductase in Polyketide synthases. |
| >cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Probab=98.38 E-value=7.2e-06 Score=58.55 Aligned_cols=113 Identities=29% Similarity=0.384 Sum_probs=75.8
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~ 51 (129)
+|++|+++++++++.+.++ .+|++.++++.. .++.+.+.+ |+++.+|..
T Consensus 163 ~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~~~~g~~i~~~~~ 240 (323)
T cd05276 163 LGARVIATAGSEEKLEACR-ALGADVAINYRT-EDFAEEVKEATGGRGVDVILDMVGGDYLARNLRALAPDGRLVLIGLL 240 (323)
T ss_pred cCCEEEEEcCCHHHHHHHH-HcCCCEEEeCCc-hhHHHHHHHHhCCCCeEEEEECCchHHHHHHHHhhccCCEEEEEecC
Confidence 4789999998888888886 899988888765 444443321 667766642
Q ss_pred CCCCCC-C-Ccceeccc-----------------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccce
Q 039636 52 KHETPR-E-NCSMWNDL-----------------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGK 112 (129)
Q Consensus 52 ~~~~~~-~-~~l~~~~~-----------------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gk 112 (129)
+..... . ..++.++. .....+.++++++.++.+.+.....++++++.+|++.+.++...||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k 320 (323)
T cd05276 241 GGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRPVIDKVFPLEEAAEAHRRMESNEHIGK 320 (323)
T ss_pred CCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHHHHhCCCcce
Confidence 111000 0 01111110 1234567788999999998765566899999999999999888899
Q ss_pred EEE
Q 039636 113 QAL 115 (129)
Q Consensus 113 vvv 115 (129)
+++
T Consensus 321 vv~ 323 (323)
T cd05276 321 IVL 323 (323)
T ss_pred EeC
Confidence 874
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding |
| >cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.3e-05 Score=57.69 Aligned_cols=114 Identities=20% Similarity=0.253 Sum_probs=76.1
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~ 51 (129)
+|++|+.++ ++++.+.+. .+|++.+++... .++.+.+.+ |+++.+|..
T Consensus 165 ~g~~v~~~~-~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~G~~v~~~~~ 241 (325)
T cd08271 165 AGLRVITTC-SKRNFEYVK-SLGADHVIDYND-EDVCERIKEITGGRGVDAVLDTVGGETAAALAPTLAFNGHLVCIQGR 241 (325)
T ss_pred cCCEEEEEE-cHHHHHHHH-HcCCcEEecCCC-ccHHHHHHHHcCCCCCcEEEECCCcHhHHHHHHhhccCCEEEEEcCC
Confidence 478888887 677778886 899988887665 444443332 677766541
Q ss_pred CC-CCCC--CCcceec----------c-----cchHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceE
Q 039636 52 KH-ETPR--ENCSMWN----------D-----LTYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQ 113 (129)
Q Consensus 52 ~~-~~~~--~~~l~~~----------~-----~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkv 113 (129)
.. .... ...+... . ....+.+.++++++.++.+.+.....++++++.++++.+.++...||+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~~ki 321 (325)
T cd08271 242 PDASPDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPLVIEVLPFEQLPEALRALKDRHTRGKI 321 (325)
T ss_pred CCCcchhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeeccceEEcHHHHHHHHHHHHcCCccceE
Confidence 11 0100 0000000 0 023456788999999999987655568999999999999998889999
Q ss_pred EEEe
Q 039636 114 ALDL 117 (129)
Q Consensus 114 vv~~ 117 (129)
++++
T Consensus 322 v~~~ 325 (325)
T cd08271 322 VVTI 325 (325)
T ss_pred EEEC
Confidence 8863
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases | Back alignment and domain information |
|---|
Probab=98.36 E-value=5.7e-06 Score=60.37 Aligned_cols=112 Identities=25% Similarity=0.272 Sum_probs=74.5
Q ss_pred CCcE-EEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc------------------------------ccEEEec
Q 039636 1 MGCY-VVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------------------GQNARCS 49 (129)
Q Consensus 1 ~Ga~-Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~------------------------------G~~v~~G 49 (129)
+|++ |+++++++++.+.++ ++|++.++++++ .. .+.+.+ |+++.+|
T Consensus 182 ~G~~~v~~~~~~~~~~~~l~-~~g~~~~~~~~~-~~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g 258 (343)
T cd08236 182 LGAKRVIAVDIDDEKLAVAR-ELGADDTINPKE-ED-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPGGKVVLVG 258 (343)
T ss_pred cCCCEEEEEcCCHHHHHHHH-HcCCCEEecCcc-cc-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEc
Confidence 4776 999998888888886 889988888765 33 222211 7787777
Q ss_pred CCCCCC-CCC-C--cceeccc------------chHHHHHHHHHHHHcCCce--eeeeeecCcccHHHHHHHHHc-CCcc
Q 039636 50 ASKHET-PRE-N--CSMWNDL------------TYSKFLDVVLPLIREGKIV--YVEDIVEGLENAPAALLGLFS-GRNV 110 (129)
Q Consensus 50 ~~~~~~-~~~-~--~l~~~~~------------~~~~~~~~~~~~~~~g~i~--~~~~~~~~l~~~~~a~~~~~~-~~~~ 110 (129)
...... ... + .++.++. ...+.++++++++.+|.+. +.+..+++++++.++++.+.+ +...
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (343)
T cd08236 259 IPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFS 338 (343)
T ss_pred ccCCCcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCe
Confidence 521110 000 0 0011111 2256788999999999986 344456899999999999998 6778
Q ss_pred ceEEE
Q 039636 111 GKQAL 115 (129)
Q Consensus 111 Gkvvv 115 (129)
||+|+
T Consensus 339 ~k~v~ 343 (343)
T cd08236 339 GKVLL 343 (343)
T ss_pred eEEeC
Confidence 89874
|
This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast |
| >cd08241 QOR1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=98.36 E-value=7.6e-06 Score=58.50 Aligned_cols=114 Identities=27% Similarity=0.327 Sum_probs=77.9
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~ 51 (129)
+|+.|++++.++++.+.++ .+|++.++++.. .++.+.+.+ |+++.+|..
T Consensus 163 ~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~i~~~~~~~~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~~~~ 240 (323)
T cd08241 163 LGARVIAAASSEEKLALAR-ALGADHVIDYRD-PDLRERVKALTGGRGVDVVYDPVGGDVFEASLRSLAWGGRLLVIGFA 240 (323)
T ss_pred hCCEEEEEeCCHHHHHHHH-HcCCceeeecCC-ccHHHHHHHHcCCCCcEEEEECccHHHHHHHHHhhccCCEEEEEccC
Confidence 3788999999988888887 889888887665 455443332 677776641
Q ss_pred CCCCC---C-----CC-cceeccc---------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceE
Q 039636 52 KHETP---R-----EN-CSMWNDL---------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQ 113 (129)
Q Consensus 52 ~~~~~---~-----~~-~l~~~~~---------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkv 113 (129)
..... . .+ .+..... .....++++++++.++.+.+.+...++++++.++++.+..+...||+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 320 (323)
T cd08241 241 SGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRPHVSAVFPLEQAAEALRALADRKATGKV 320 (323)
T ss_pred CCCcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCcccccceEEcHHHHHHHHHHHHhCCCCCcE
Confidence 11110 0 01 1111000 13467888999999999877655568999999999999988888998
Q ss_pred EEE
Q 039636 114 ALD 116 (129)
Q Consensus 114 vv~ 116 (129)
+++
T Consensus 321 vv~ 323 (323)
T cd08241 321 VLT 323 (323)
T ss_pred EeC
Confidence 863
|
QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic |
| >cd08234 threonine_DH_like L-threonine dehydrogenase | Back alignment and domain information |
|---|
Probab=98.36 E-value=8.7e-06 Score=59.11 Aligned_cols=112 Identities=21% Similarity=0.180 Sum_probs=74.6
Q ss_pred CCcE-EEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHH---------------------------hcc-ccEEEecCC
Q 039636 1 MGCY-VVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTA---------------------------LKR-GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~-Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~---------------------------v~~-G~~v~~G~~ 51 (129)
+|++ |+++++++++.+.++ ++|++.++++.+ .++..+ +.. |+++.+|..
T Consensus 182 ~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~ 259 (334)
T cd08234 182 NGASRVTVAEPNEEKLELAK-KLGATETVDPSR-EDPEAQKEDNPYGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVY 259 (334)
T ss_pred cCCcEEEEECCCHHHHHHHH-HhCCeEEecCCC-CCHHHHHHhcCCCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecC
Confidence 4776 888888898888886 889888887654 332211 000 788888752
Q ss_pred CCC-CCCCC--cceeccc------chHHHHHHHHHHHHcCCceee--eeeecCcccHHHHHHHHHcCCccceEEE
Q 039636 52 KHE-TPREN--CSMWNDL------TYSKFLDVVLPLIREGKIVYV--EDIVEGLENAPAALLGLFSGRNVGKQAL 115 (129)
Q Consensus 52 ~~~-~~~~~--~l~~~~~------~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~Gkvvv 115 (129)
+.. ....+ .++.++. ...+.++++++++.++.+.+. +..+++++++++|++.+.. ...||+|+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 260 APDARVSISPFEIFQKELTIIGSFINPYTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred CCCCCcccCHHHHHhCCcEEEEeccCHHHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence 211 11111 1111111 345678899999999998753 3455899999999999998 78899986
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. |
| >TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent | Back alignment and domain information |
|---|
Probab=98.35 E-value=7.8e-06 Score=61.35 Aligned_cols=46 Identities=17% Similarity=0.266 Sum_probs=37.5
Q ss_pred HHHHHHHHHHcCCceee--ee-eecCcccHHHHHHHHHcCCccceEEEEe
Q 039636 71 FLDVVLPLIREGKIVYV--ED-IVEGLENAPAALLGLFSGRNVGKQALDL 117 (129)
Q Consensus 71 ~~~~~~~~~~~g~i~~~--~~-~~~~l~~~~~a~~~~~~~~~~Gkvvv~~ 117 (129)
.+.++++++.+|++++. +. .+|||+++++||+.+.+++ .+|++|.+
T Consensus 342 ~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~~~~-~~Kvvi~~ 390 (393)
T TIGR02819 342 YNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFDAGA-AKKFVIDP 390 (393)
T ss_pred hHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHhhCC-ceEEEEeC
Confidence 34679999999998763 23 4589999999999999875 48999976
|
Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent. |
| >PLN02702 L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=98.35 E-value=7.9e-06 Score=60.36 Aligned_cols=115 Identities=16% Similarity=0.163 Sum_probs=72.7
Q ss_pred CCcE-EEEEeCChHHHHHHHHhcCCCEEEeCCC-cccHHHHhcc--------------------------------ccEE
Q 039636 1 MGCY-VVGSAGSKEKIERLKNKFAFDDAFNYKE-EQDLVTALKR--------------------------------GQNA 46 (129)
Q Consensus 1 ~Ga~-Vi~t~~s~~k~~~~~~~lGad~vi~~~~-~~~~~~~v~~--------------------------------G~~v 46 (129)
+|++ |++++.++++.++++ ++|+++++++.. ..++.+.+.+ |+++
T Consensus 204 ~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v 282 (364)
T PLN02702 204 FGAPRIVIVDVDDERLSVAK-QLGADEIVLVSTNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVC 282 (364)
T ss_pred cCCCEEEEECCCHHHHHHHH-HhCCCEEEecCcccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEE
Confidence 4664 777777888888887 899998876531 1344333210 6777
Q ss_pred EecCCCCCCC-CCCcceeccc------chHHHHHHHHHHHHcCCce--eeeeeec--CcccHHHHHHHHHcCCccceEEE
Q 039636 47 RCSASKHETP-RENCSMWNDL------TYSKFLDVVLPLIREGKIV--YVEDIVE--GLENAPAALLGLFSGRNVGKQAL 115 (129)
Q Consensus 47 ~~G~~~~~~~-~~~~l~~~~~------~~~~~~~~~~~~~~~g~i~--~~~~~~~--~l~~~~~a~~~~~~~~~~Gkvvv 115 (129)
.+|....... ....+..++. .....++.+++++.+|.+. +.+..+| +++++.+|++.+.+++..+|+|+
T Consensus 283 ~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~ 362 (364)
T PLN02702 283 LVGMGHNEMTVPLTPAAAREVDVVGVFRYRNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMF 362 (364)
T ss_pred EEccCCCCCcccHHHHHhCccEEEEeccChHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEE
Confidence 7765221111 0001111111 2345678899999999985 3334454 45899999999999888899998
Q ss_pred E
Q 039636 116 D 116 (129)
Q Consensus 116 ~ 116 (129)
.
T Consensus 363 ~ 363 (364)
T PLN02702 363 N 363 (364)
T ss_pred e
Confidence 4
|
|
| >cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=98.34 E-value=5e-06 Score=60.29 Aligned_cols=113 Identities=23% Similarity=0.117 Sum_probs=75.5
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcc--------------cH-HHHhc---c-ccEEEecCCCCCCCCCC--
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQ--------------DL-VTALK---R-GQNARCSASKHETPREN-- 59 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~--------------~~-~~~v~---~-G~~v~~G~~~~~~~~~~-- 59 (129)
+|++|++++.++++.+.++ ++|++++++++... .. ...++ . |+++.+|.........+
T Consensus 190 ~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~ 268 (329)
T cd08298 190 QGAEVFAFTRSGEHQELAR-ELGADWAGDSDDLPPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYE 268 (329)
T ss_pred CCCeEEEEcCChHHHHHHH-HhCCcEEeccCccCCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchh
Confidence 4789999999999999996 89998887654200 00 11111 1 88887775211111100
Q ss_pred cce-----eccc-chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEE
Q 039636 60 CSM-----WNDL-TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQAL 115 (129)
Q Consensus 60 ~l~-----~~~~-~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv 115 (129)
.+. .... ...+.+++++++++++.+++.. .+++++++.+|++.+.+++..||+|+
T Consensus 269 ~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 269 LLWGEKTIRSVANLTRQDGEEFLKLAAEIPIKPEV-ETYPLEEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred hhhCceEEEEecCCCHHHHHHHHHHHHcCCCCceE-EEEeHHHHHHHHHHHHcCCCcceeeC
Confidence 111 1111 3456778899999999998753 45899999999999999999999874
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha |
| >cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.4e-05 Score=57.33 Aligned_cols=113 Identities=24% Similarity=0.232 Sum_probs=77.0
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~ 51 (129)
+|++|++++++ ++.+.++ ++|++.++++.. . +.+.+.+ |+++.+|..
T Consensus 168 ~g~~v~~~~~~-~~~~~~~-~~g~~~~~~~~~-~-~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~ 243 (326)
T cd08272 168 AGARVYATASS-EKAAFAR-SLGADPIIYYRE-T-VVEYVAEHTGGRGFDVVFDTVGGETLDASFEAVALYGRVVSILGG 243 (326)
T ss_pred cCCEEEEEech-HHHHHHH-HcCCCEEEecch-h-HHHHHHHhcCCCCCcEEEECCChHHHHHHHHHhccCCEEEEEecC
Confidence 47899999887 8888887 899988887654 3 4433332 677766542
Q ss_pred CCCCC----CCC-cce----------eccc-chHHHHHHHHHHHHcCCceeeee-eecCcccHHHHHHHHHcCCccceEE
Q 039636 52 KHETP----REN-CSM----------WNDL-TYSKFLDVVLPLIREGKIVYVED-IVEGLENAPAALLGLFSGRNVGKQA 114 (129)
Q Consensus 52 ~~~~~----~~~-~l~----------~~~~-~~~~~~~~~~~~~~~g~i~~~~~-~~~~l~~~~~a~~~~~~~~~~Gkvv 114 (129)
..... ..+ .+. ...+ .....+.++++++.++.+.+.+. ..++++++.++++.+.+++..||++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv 323 (326)
T cd08272 244 ATHDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRPLLDPRTFPLEEAAAAHARLESGSARGKIV 323 (326)
T ss_pred CccchhhHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCcccccccceecHHHHHHHHHHHHcCCcccEEE
Confidence 11000 011 000 0011 23567888999999999987644 6689999999999999888889999
Q ss_pred EEe
Q 039636 115 LDL 117 (129)
Q Consensus 115 v~~ 117 (129)
+++
T Consensus 324 ~~~ 326 (326)
T cd08272 324 IDV 326 (326)
T ss_pred EEC
Confidence 864
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1 | Back alignment and domain information |
|---|
Probab=98.28 E-value=2.4e-05 Score=57.17 Aligned_cols=113 Identities=23% Similarity=0.303 Sum_probs=76.1
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc--------------------------ccEEEecCCC--
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR--------------------------GQNARCSASK-- 52 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~--------------------------G~~v~~G~~~-- 52 (129)
+|++|++++++ ++.+.++ ++|+++++++.. .++.+.+.. |+++.+|..+
T Consensus 186 ~G~~v~~~~~~-~~~~~~~-~~g~~~~~~~~~-~~~~~~l~~~~~vd~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~ 262 (350)
T cd08248 186 WGAHVTTTCST-DAIPLVK-SLGADDVIDYNN-EDFEEELTERGKFDVILDTVGGDTEKWALKLLKKGGTYVTLVSPLLK 262 (350)
T ss_pred CCCeEEEEeCc-chHHHHH-HhCCceEEECCC-hhHHHHHHhcCCCCEEEECCChHHHHHHHHHhccCCEEEEecCCccc
Confidence 48899988765 5667776 899988888765 444433221 8888887511
Q ss_pred CCC---C----CC-C---------cceecc-------cchHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCC
Q 039636 53 HET---P----RE-N---------CSMWND-------LTYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGR 108 (129)
Q Consensus 53 ~~~---~----~~-~---------~l~~~~-------~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~ 108 (129)
... . .. . .+.... ......++++++++.+|.+.+.+...++++++.+|++.+.+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~ 342 (350)
T cd08248 263 NTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGH 342 (350)
T ss_pred ccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHHHHhCCCEecccceeecHHHHHHHHHHHhcCC
Confidence 000 0 00 0 000000 0235678999999999999877666689999999999999988
Q ss_pred ccceEEEE
Q 039636 109 NVGKQALD 116 (129)
Q Consensus 109 ~~Gkvvv~ 116 (129)
..||++++
T Consensus 343 ~~~~vv~~ 350 (350)
T cd08248 343 ARGKTVIK 350 (350)
T ss_pred CceEEEeC
Confidence 88998863
|
Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1 | Back alignment and domain information |
|---|
Probab=98.27 E-value=2.1e-05 Score=58.73 Aligned_cols=50 Identities=24% Similarity=0.194 Sum_probs=40.9
Q ss_pred chHHHHHHHHHHHHcCCceee--eeeecCcccHHHHHHHHHcCC-ccceEEEE
Q 039636 67 TYSKFLDVVLPLIREGKIVYV--EDIVEGLENAPAALLGLFSGR-NVGKQALD 116 (129)
Q Consensus 67 ~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~-~~Gkvvv~ 116 (129)
...+.++++++++.+|.+.+. +..+++++++.+|++.+..++ ..+|+||+
T Consensus 333 ~~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~ 385 (386)
T cd08283 333 HVQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLK 385 (386)
T ss_pred CchHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEec
Confidence 345678999999999999864 334589999999999998876 56899985
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T |
| >cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=98.23 E-value=3.4e-05 Score=55.29 Aligned_cols=114 Identities=21% Similarity=0.196 Sum_probs=76.2
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~ 51 (129)
.|++|+.++.++++.+.++ .+|++.++++.. .++.+.+.+ |+++.+|..
T Consensus 168 ~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~ 245 (328)
T cd08268 168 AGATVIATTRTSEKRDALL-ALGAAHVIVTDE-EDLVAEVLRITGGKGVDVVFDPVGGPQFAKLADALAPGGTLVVYGAL 245 (328)
T ss_pred cCCEEEEEcCCHHHHHHHH-HcCCCEEEecCC-ccHHHHHHHHhCCCCceEEEECCchHhHHHHHHhhccCCEEEEEEeC
Confidence 4789999998988888887 889888887665 444333321 677776641
Q ss_pred CCCC--CC------CC-cceecc-------c-chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEE
Q 039636 52 KHET--PR------EN-CSMWND-------L-TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQA 114 (129)
Q Consensus 52 ~~~~--~~------~~-~l~~~~-------~-~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvv 114 (129)
+... .. .+ .+.... + .....++.+.+++.++.+.+.....++++++.++++.+..+...||+|
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv 325 (328)
T cd08268 246 SGEPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKPVVDRVFPFDDIVEAHRYLESGQQIGKIV 325 (328)
T ss_pred CCCCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCcCCcccEEcHHHHHHHHHHHHcCCCCceEE
Confidence 1110 00 11 111100 1 234566677777888988876556689999999999999988889998
Q ss_pred EE
Q 039636 115 LD 116 (129)
Q Consensus 115 v~ 116 (129)
++
T Consensus 326 ~~ 327 (328)
T cd08268 326 VT 327 (328)
T ss_pred Ee
Confidence 75
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH) | Back alignment and domain information |
|---|
Probab=98.23 E-value=1.5e-05 Score=59.21 Aligned_cols=48 Identities=23% Similarity=0.168 Sum_probs=41.2
Q ss_pred hHHHHHHHHHHHHcCCceee--eeeecCcccHHHHHHHHHcCCccceEEEE
Q 039636 68 YSKFLDVVLPLIREGKIVYV--EDIVEGLENAPAALLGLFSGRNVGKQALD 116 (129)
Q Consensus 68 ~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~ 116 (129)
..+.+.++++++.++.+.+. +..+++++++++|++.+.+++ .+|+|++
T Consensus 325 ~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~kvvv~ 374 (375)
T cd08282 325 VKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ETKVVIK 374 (375)
T ss_pred chhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ceEEEeC
Confidence 55678889999999999873 455689999999999999988 9999875
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo |
| >cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=98.17 E-value=3.4e-05 Score=55.29 Aligned_cols=112 Identities=28% Similarity=0.353 Sum_probs=74.1
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHH------------------------HH---hcc-ccEEEecCCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLV------------------------TA---LKR-GQNARCSASK 52 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~------------------------~~---v~~-G~~v~~G~~~ 52 (129)
+|++|++++++ ++.+.++ .+|+++++++.. .++. .. +.. |+++.+|..+
T Consensus 167 ~g~~v~~~~~~-~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~~~ 243 (319)
T cd08267 167 LGAHVTGVCST-RNAELVR-SLGADEVIDYTT-EDFVALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRYVSVGGGP 243 (319)
T ss_pred cCCEEEEEeCH-HHHHHHH-HcCCCEeecCCC-CCcchhccCCCCCcEEEECCCchHHHHHHhhhccCCCCEEEEecccc
Confidence 47899998865 7788886 899888887543 2221 00 111 7788777511
Q ss_pred CCCC-CC-----C-cceecc-----c-chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEE
Q 039636 53 HETP-RE-----N-CSMWND-----L-TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQAL 115 (129)
Q Consensus 53 ~~~~-~~-----~-~l~~~~-----~-~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv 115 (129)
.... .. . ...... . ...+.+.++++++.++.+.+.+..+++++++++|++.+.++...||+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~~~vvv 319 (319)
T cd08267 244 SGLLLVLLLLPLTLGGGGRRLKFFLAKPNAEDLEQLAELVEEGKLKPVIDSVYPLEDAPEAYRRLKSGRARGKVVI 319 (319)
T ss_pred ccccccccccchhhccccceEEEEEecCCHHHHHHHHHHHHCCCeeeeeeeEEcHHHHHHHHHHHhcCCCCCcEeC
Confidence 1100 00 0 000010 0 2367889999999999998776666899999999999999888888874
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=98.13 E-value=4.4e-05 Score=56.80 Aligned_cols=114 Identities=12% Similarity=0.123 Sum_probs=71.5
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCccc--HHHHhcc------------------------------ccEEE
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEEQD--LVTALKR------------------------------GQNAR 47 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~--~~~~v~~------------------------------G~~v~ 47 (129)
+|+ +|+++++++++++.++ ++|+++++++.+ .+ +.+.+.+ |+++.
T Consensus 213 ~G~~~Vi~~~~~~~~~~~a~-~lGa~~~i~~~~-~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~ 290 (373)
T cd08299 213 AGASRIIAVDINKDKFAKAK-ELGATECINPQD-YKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVI 290 (373)
T ss_pred cCCCeEEEEcCCHHHHHHHH-HcCCceEecccc-cchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEE
Confidence 477 7999999999999997 899999998754 22 3332221 66766
Q ss_pred ecCCCCC-CCCCCc-ceecc-------c---chHHHHHHHHHHHHcCCcee--eeeeecCcccHHHHHHHHHcCCccceE
Q 039636 48 CSASKHE-TPRENC-SMWND-------L---TYSKFLDVVLPLIREGKIVY--VEDIVEGLENAPAALLGLFSGRNVGKQ 113 (129)
Q Consensus 48 ~G~~~~~-~~~~~~-l~~~~-------~---~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~Gkv 113 (129)
+|..... ....+. .+... . .....+.++++.+.++.+++ .+..+|+++++.+|++.+.+++. .|+
T Consensus 291 ~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~ 369 (373)
T cd08299 291 VGVPPSSQNLSINPMLLLTGRTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRT 369 (373)
T ss_pred EccCCCCceeecCHHHHhcCCeEEEEEecCCccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceE
Confidence 6652111 100000 01111 1 12356667778787776543 34456899999999999887664 577
Q ss_pred EEEe
Q 039636 114 ALDL 117 (129)
Q Consensus 114 vv~~ 117 (129)
++.+
T Consensus 370 ~~~~ 373 (373)
T cd08299 370 VLTF 373 (373)
T ss_pred EEeC
Confidence 7753
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically |
| >cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases | Back alignment and domain information |
|---|
Probab=98.10 E-value=5.8e-05 Score=53.67 Aligned_cols=112 Identities=23% Similarity=0.280 Sum_probs=74.3
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHH------------------------Hhcc-ccEEEecCCCCCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVT------------------------ALKR-GQNARCSASKHET 55 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~------------------------~v~~-G~~v~~G~~~~~~ 55 (129)
+|++|++++.++ +.+.++ .+|+++++++.. .++.+ .+.. |+++.+|......
T Consensus 168 ~g~~v~~~~~~~-~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~ 244 (309)
T cd05289 168 RGARVIATASAA-NADFLR-SLGADEVIDYTK-GDFERAAAPGGVDAVLDTVGGETLARSLALVKPGGRLVSIAGPPPAE 244 (309)
T ss_pred cCCEEEEEecch-hHHHHH-HcCCCEEEeCCC-CchhhccCCCCceEEEECCchHHHHHHHHHHhcCcEEEEEcCCCcch
Confidence 478899888777 778886 899888887654 33321 0111 7777776521111
Q ss_pred C--C-CC-cceeccc-chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEE
Q 039636 56 P--R-EN-CSMWNDL-TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQAL 115 (129)
Q Consensus 56 ~--~-~~-~l~~~~~-~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv 115 (129)
. . .+ .+..... ...+.+.++++++.++.+.+.+...++++++.++++.+..++..||+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 309 (309)
T cd05289 245 QAAKRRGVRAGFVFVEPDGEQLAELAELVEAGKLRPVVDRVFPLEDAAEAHERLESGHARGKVVL 309 (309)
T ss_pred hhhhhccceEEEEEecccHHHHHHHHHHHHCCCEEEeeccEEcHHHHHHHHHHHHhCCCCCcEeC
Confidence 0 0 01 0000000 1167889999999999998765556899999999999999888888874
|
Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et |
| >cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=98.02 E-value=0.00015 Score=52.45 Aligned_cols=47 Identities=32% Similarity=0.222 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEE
Q 039636 69 SKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQAL 115 (129)
Q Consensus 69 ~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv 115 (129)
.+.++++++++.+|.+++.+..++++++++++++.+.+++..||+|+
T Consensus 284 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 284 RQDLTELLDLLAKGKIRPKIAKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred HHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 56789999999999998776566899999999999999988999985
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.00011 Score=54.51 Aligned_cols=111 Identities=16% Similarity=0.173 Sum_probs=71.9
Q ss_pred CCcE-EEEEeCChHHHHHHHHhcCCCEEEeCCCcc--cHHHHhcc------------------------------ccEEE
Q 039636 1 MGCY-VVGSAGSKEKIERLKNKFAFDDAFNYKEEQ--DLVTALKR------------------------------GQNAR 47 (129)
Q Consensus 1 ~Ga~-Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~--~~~~~v~~------------------------------G~~v~ 47 (129)
+|+. |+++++++++.+.++ ++|+++++++++ . ++.+.+.+ |+++.
T Consensus 206 ~G~~~v~~~~~~~~~~~~~~-~~g~~~~v~~~~-~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~ 283 (365)
T cd05279 206 AGASRIIAVDINKDKFEKAK-QLGATECINPRD-QDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVV 283 (365)
T ss_pred cCCCeEEEEeCCHHHHHHHH-HhCCCeeccccc-ccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEE
Confidence 4774 777777899999997 999999998765 4 44443322 45555
Q ss_pred ecCCC-CCCCCCC--cceeccc----------chHHHHHHHHHHHHcCCceee--eeeecCcccHHHHHHHHHcCCccce
Q 039636 48 CSASK-HETPREN--CSMWNDL----------TYSKFLDVVLPLIREGKIVYV--EDIVEGLENAPAALLGLFSGRNVGK 112 (129)
Q Consensus 48 ~G~~~-~~~~~~~--~l~~~~~----------~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~Gk 112 (129)
+|... ......+ .+ .+.. ...+.+.++++++.+|.+.+. ...+++++++.+|++.+.+++. -|
T Consensus 284 ~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-~~ 361 (365)
T cd05279 284 VGVPPSGTEATLDPNDL-LTGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGES-IR 361 (365)
T ss_pred EecCCCCCceeeCHHHH-hcCCeEEEEeccCCchHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCc-ee
Confidence 54311 0111001 11 1110 345678889999999998764 4455899999999999987665 36
Q ss_pred EEE
Q 039636 113 QAL 115 (129)
Q Consensus 113 vvv 115 (129)
+++
T Consensus 362 ~~~ 364 (365)
T cd05279 362 TIL 364 (365)
T ss_pred eee
Confidence 554
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall |
| >cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.0002 Score=50.73 Aligned_cols=114 Identities=19% Similarity=0.145 Sum_probs=69.9
Q ss_pred CCcE-EEEEeCChHHHHHHHHhcC-CCEEEeCC----------------CcccH-H---HHhcc-ccEEEecCCCCCCCC
Q 039636 1 MGCY-VVGSAGSKEKIERLKNKFA-FDDAFNYK----------------EEQDL-V---TALKR-GQNARCSASKHETPR 57 (129)
Q Consensus 1 ~Ga~-Vi~t~~s~~k~~~~~~~lG-ad~vi~~~----------------~~~~~-~---~~v~~-G~~v~~G~~~~~~~~ 57 (129)
+|++ |+++++++++.+.++ ++| ++.++++. ..... . +.+.. |+++.+|........
T Consensus 120 ~g~~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~ 198 (277)
T cd08255 120 AGAREVVGVDPDAARRELAE-ALGPADPVAADTADEIGGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKPLL 198 (277)
T ss_pred cCCCcEEEECCCHHHHHHHH-HcCCCccccccchhhhcCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCCccc
Confidence 4777 999999999988776 777 34443321 10111 1 11222 899888762111100
Q ss_pred -------CC-cceeccc------------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcC-CccceEEE
Q 039636 58 -------EN-CSMWNDL------------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSG-RNVGKQAL 115 (129)
Q Consensus 58 -------~~-~l~~~~~------------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~-~~~Gkvvv 115 (129)
.. .+..... ...+.++++++++.+|.+++.+...++++++.+|++.+..+ ....|+++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~~ 277 (277)
T cd08255 199 LGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVVL 277 (277)
T ss_pred cHHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCccccccCccCHHHHHHHHHHHHcCCccceeeeC
Confidence 01 1111111 11357899999999999987765668999999999999876 34467653
|
This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD |
| >cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00068 Score=48.93 Aligned_cols=48 Identities=35% Similarity=0.378 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEEe
Q 039636 70 KFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDL 117 (129)
Q Consensus 70 ~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~ 117 (129)
..+.++++++.++.+.+.....+++++++++++.+.++...||+++++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 290 EVMDKLLKLYEEGKIKPKIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred HHHHHHHHHHHCCCCCCceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 457888999999998877656689999999999999988899999863
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0008 Score=48.71 Aligned_cols=43 Identities=28% Similarity=0.161 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceE
Q 039636 69 SKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQ 113 (129)
Q Consensus 69 ~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkv 113 (129)
.+.++++++++.... +.+..+++++++++|++.+.+++..||+
T Consensus 282 ~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~kv 324 (325)
T cd08264 282 RKELLELVKIAKDLK--VKVWKTFKLEEAKEALKELFSKERDGRI 324 (325)
T ss_pred HHHHHHHHHHHHcCC--ceeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence 467888999986444 3444568999999999999988887875
|
This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo |
| >KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion] | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00079 Score=48.60 Aligned_cols=50 Identities=26% Similarity=0.224 Sum_probs=38.0
Q ss_pred hHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCc-cceEEEEe
Q 039636 68 YSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRN-VGKQALDL 117 (129)
Q Consensus 68 ~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~-~Gkvvv~~ 117 (129)
..+.+.++..|++.|.|+.+.....+|++...|++....... .||-++.+
T Consensus 302 ~~~~i~~~~~l~~~G~i~~~~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~ 352 (354)
T KOG0025|consen 302 RKEMIDELCDLYRRGKLKAPNCEKVPLADHKTALDAALSKFGKSGKQIIVL 352 (354)
T ss_pred HHHHHHHHHHHHHcCeeccccceeeechhhhHHHHHHHHHhccCCceEEEe
Confidence 457889999999999998887665699998888887766432 35665554
|
|
| >TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00028 Score=50.41 Aligned_cols=31 Identities=19% Similarity=0.131 Sum_probs=25.6
Q ss_pred CCcE-EEEEeCChHHHHHHHHhcCCCEEEeCCC
Q 039636 1 MGCY-VVGSAGSKEKIERLKNKFAFDDAFNYKE 32 (129)
Q Consensus 1 ~Ga~-Vi~t~~s~~k~~~~~~~lGad~vi~~~~ 32 (129)
+|++ |++++.+++|.++++ ++|+++++++.+
T Consensus 143 ~G~~~Vi~~~~~~~r~~~a~-~~Ga~~~i~~~~ 174 (280)
T TIGR03366 143 AGAARVVAADPSPDRRELAL-SFGATALAEPEV 174 (280)
T ss_pred cCCCEEEEECCCHHHHHHHH-HcCCcEecCchh
Confidence 4775 888888899999987 999999988643
|
This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. |
| >cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0031 Score=46.30 Aligned_cols=49 Identities=27% Similarity=0.329 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEEe
Q 039636 69 SKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDL 117 (129)
Q Consensus 69 ~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~ 117 (129)
.+.++++++++.+|.+++.+...++++++++|++.+.+++..||+++++
T Consensus 304 ~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 352 (352)
T cd08247 304 ADWIEKCAELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIKV 352 (352)
T ss_pred HHHHHHHHHHHhCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence 3568889999999999887666689999999999999999999999864
|
This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi |
| >cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.038 Score=39.93 Aligned_cols=37 Identities=24% Similarity=0.302 Sum_probs=24.8
Q ss_pred CCcEEEEEe--CChHHHHHHHHhcCCCEEEeCCCcccHHHHh
Q 039636 1 MGCYVVGSA--GSKEKIERLKNKFAFDDAFNYKEEQDLVTAL 40 (129)
Q Consensus 1 ~Ga~Vi~t~--~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v 40 (129)
+|++|++++ +++++.+.++ ++|++++ ++.. .++.+.+
T Consensus 187 ~G~~v~~~~~~~~~~~~~~~~-~~g~~~~-~~~~-~~~~~~l 225 (306)
T cd08258 187 QGATVVVVGTEKDEVRLDVAK-ELGADAV-NGGE-EDLAELV 225 (306)
T ss_pred cCCEEEEECCCCCHHHHHHHH-HhCCccc-CCCc-CCHHHHH
Confidence 478887763 3455677776 8899888 7765 5555444
|
This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous |
| >cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) | Back alignment and domain information |
|---|
Probab=94.35 E-value=0.38 Score=36.74 Aligned_cols=115 Identities=10% Similarity=-0.048 Sum_probs=65.1
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCC------------CEEEeCCCccc-HHHH-hc---c-ccEEEecCCCCCCCCCCcce
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAF------------DDAFNYKEEQD-LVTA-LK---R-GQNARCSASKHETPRENCSM 62 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGa------------d~vi~~~~~~~-~~~~-v~---~-G~~v~~G~~~~~~~~~~~l~ 62 (129)
+||+|+++..++.+.+.++ .+|+ |.||+...+.. +... +. . |+++.+|..... ...+.+.
T Consensus 224 ~Ga~ViV~d~d~~R~~~A~-~~G~~~~~~~e~v~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~~~e-Id~~~L~ 301 (413)
T cd00401 224 QGARVIVTEVDPICALQAA-MEGYEVMTMEEAVKEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHFDVE-IDVKGLK 301 (413)
T ss_pred CCCEEEEEECChhhHHHHH-hcCCEEccHHHHHcCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCCCCc-cCHHHHH
Confidence 5899999988888888876 7775 44454433222 2222 21 1 566677752111 1111122
Q ss_pred eccc-------chHH-HHH--HHHHHHHcCCc-eeeeee--e-----cCcc-cHHHHHHHHHcCCc-cceEEEEe
Q 039636 63 WNDL-------TYSK-FLD--VVLPLIREGKI-VYVEDI--V-----EGLE-NAPAALLGLFSGRN-VGKQALDL 117 (129)
Q Consensus 63 ~~~~-------~~~~-~~~--~~~~~~~~g~i-~~~~~~--~-----~~l~-~~~~a~~~~~~~~~-~Gkvvv~~ 117 (129)
.+.. ...+ .+. +.+.++.+|.+ ....-. . ++|+ |+.++++.+.++.. .-|+++..
T Consensus 302 ~~el~i~g~~~~~~~~~~~~g~aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p 376 (413)
T cd00401 302 ENAVEVVNIKPQVDRYELPDGRRIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLP 376 (413)
T ss_pred hhccEEEEccCCcceEEcCCcchhhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECC
Confidence 1111 1111 344 68999999998 332211 2 5788 99999999987653 34666554
|
The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+. |
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=90.48 E-value=0.64 Score=32.19 Aligned_cols=37 Identities=35% Similarity=0.510 Sum_probs=29.6
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHH
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTA 39 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~ 39 (129)
+|++|+++++++++.+.++ .+|+++++++.. .++.+.
T Consensus 157 ~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~ 193 (271)
T cd05188 157 AGARVIVTDRSDEKLELAK-ELGADHVIDYKE-EDLEEE 193 (271)
T ss_pred cCCeEEEEcCCHHHHHHHH-HhCCceeccCCc-CCHHHH
Confidence 4789999999998889887 899999988776 555544
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=85.74 E-value=1.5 Score=34.55 Aligned_cols=29 Identities=14% Similarity=0.249 Sum_probs=25.0
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEE-EeC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDA-FNY 30 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~v-i~~ 30 (129)
+||+|++++.++++++.++ ++|++++ +|.
T Consensus 187 lGA~V~a~D~~~~rle~ae-slGA~~v~i~~ 216 (509)
T PRK09424 187 LGAIVRAFDTRPEVAEQVE-SMGAEFLELDF 216 (509)
T ss_pred CCCEEEEEeCCHHHHHHHH-HcCCeEEEecc
Confidence 5899999999999999997 9999855 654
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 129 | ||||
| 2j3h_A | 345 | Crystal Structure Of Arabidopsis Thaliana Double Bo | 1e-28 | ||
| 4hfj_A | 351 | X-ray Crystal Structure Of A Double Bond Reductase | 2e-27 | ||
| 2y05_A | 328 | Crystal Structure Of Human Leukotriene B4 12-Hydrox | 2e-09 | ||
| 1zsv_A | 349 | Crystal Structure Of Human Nadp-Dependent Leukotrie | 3e-09 | ||
| 1v3t_A | 333 | Crystal Structure Of Leukotriene B4 12- Hydroxydehy | 4e-09 | ||
| 4b7c_A | 336 | Crystal Structure Of Hypothetical Protein Pa1648 Fr | 1e-04 |
| >pdb|2J3H|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond Reductase (At5g16970)-Apo Form Length = 345 | Back alignment and structure |
|
| >pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From Nicotiana Tabacum Length = 351 | Back alignment and structure |
|
| >pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4 12-Hydroxydehydrogenase In Complex With Nadp And Raloxifene Length = 328 | Back alignment and structure |
|
| >pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4 12- Hydroxydehydrogenase Length = 349 | Back alignment and structure |
|
| >pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12- Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase Length = 333 | Back alignment and structure |
|
| >pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From Pseudomonas Aeruginosa. Length = 336 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 129 | |||
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 3e-34 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 3e-31 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 9e-20 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 7e-15 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 1e-19 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 1e-04 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 2e-04 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 3e-04 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 7e-04 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 8e-04 |
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* Length = 345 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 3e-34
Identities = 67/163 (41%), Positives = 79/163 (48%), Gaps = 53/163 (32%)
Query: 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKE----EQDLVTALKRG------------- 43
MGCYVVGSAGSKEK++ LK KF FDDAFNYKE L G
Sbjct: 179 MGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKML 238
Query: 44 --------QNAR---C------SASKHETPRENCSMWNDLT----------------YSK 70
+ R C + E ++ N + YSK
Sbjct: 239 DAVLVNMNMHGRIAVCGMISQYNLENQEGVH---NLSNIIYKRNRIQGFVVSDFYDKYSK 295
Query: 71 FLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQ 113
FL+ VLP IREGKI YVED+ +GLE AP AL+GLF G+NVGKQ
Sbjct: 296 FLEFVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQ 338
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* Length = 357 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 3e-31
Identities = 35/165 (21%), Positives = 57/165 (34%), Gaps = 53/165 (32%)
Query: 1 MGCY-VVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR--------------G-- 43
+GC VVG G+ EK L ++ FD A NYK++ ++ L+ G
Sbjct: 184 LGCSRVVGICGTHEKCILLTSELGFDAAINYKKD-NVAEQLRESCPAGVDVYFDNVGGNI 242
Query: 44 ---------QNAR---C-------SASKHETPRENCSMWNDLT----------------Y 68
+N+ C + P +
Sbjct: 243 SDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKF 302
Query: 69 SKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQ 113
+ + +EGK+ E ++ GLEN AA + +G N+GKQ
Sbjct: 303 EPGILQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQ 347
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* Length = 333 | Back alignment and structure |
|---|
Score = 81.8 bits (203), Expect = 9e-20
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 68 YSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQ 113
K L ++ + EGKI Y E + +G EN PAA + + +G N+GK
Sbjct: 284 REKALRDLMKWVLEGKIQYHEHVTKGFENMPAAFIEMLNGANLGKA 329
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* Length = 333 | Back alignment and structure |
|---|
Score = 68.3 bits (168), Expect = 7e-15
Identities = 24/42 (57%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR 42
GC VVG+AGS EKI LK + FD AFNYK L ALK+
Sbjct: 169 KGCKVVGAAGSDEKIAYLK-QIGFDAAFNYKTVNSLEEALKK 209
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362 | Back alignment and structure |
|---|
Score = 81.5 bits (202), Expect = 1e-19
Identities = 34/176 (19%), Positives = 54/176 (30%), Gaps = 61/176 (34%)
Query: 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------ 42
C+V+G+ S EK LK D NYK E + T LK+
Sbjct: 187 AKCHVIGTCSSDEKSAFLK-SLGCDRPINYKTE-PVGTVLKQEYPEGVDVVYESVGGAMF 244
Query: 43 --------------------GQNARCSASKHETPRE-------NCSM----WNDLT--YS 69
G S + + S+ N Y
Sbjct: 245 DLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQ 304
Query: 70 KFLDVVLPLIREGKIVYVEDI--------VEGLENAPAALLGLFSGRNVGKQALDL 117
+ +L + G +V D+ GLE+ A+ ++ G+N GK ++L
Sbjct: 305 AAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVEL 360
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353 | Back alignment and structure |
|---|
Score = 39.1 bits (92), Expect = 1e-04
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR 42
G V +AGS K E + A NY+ E D +K
Sbjct: 191 FGAEVYATAGSTGKCEACERLGA-KRGINYRSE-DFAAVIKA 230
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354 | Back alignment and structure |
|---|
Score = 38.8 bits (91), Expect = 2e-04
Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR 42
G + +AGS++K++ + K FNYK+E D A +
Sbjct: 186 AGAIPLVTAGSQKKLQMAE-KLGAAAGFNYKKE-DFSEATLK 225
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343 | Back alignment and structure |
|---|
Score = 37.9 bits (89), Expect = 3e-04
Identities = 31/151 (20%), Positives = 48/151 (31%), Gaps = 42/151 (27%)
Query: 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------ 42
G V+ +AGS++K+ R K A D+ NY D ++R
Sbjct: 190 FGARVIATAGSEDKLRRAKALGA-DETVNYTHP-DWPKEVRRLTGGKGADKVVDHTGALY 247
Query: 43 -GQNARCSA----------SKHETPRENCS--MWNDLTY--------SKFLDVVLPLIRE 81
+ +A S + + L+ S+ + L + E
Sbjct: 248 FEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMASKSRLFPI-LRFVEE 306
Query: 82 GKIVYVEDIVEGLENAPAALLGLFSGRNVGK 112
GK+ V V LE A L R GK
Sbjct: 307 GKLKPVVGQVLPLEAAAEGHRLLEERRVFGK 337
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351 | Back alignment and structure |
|---|
Score = 37.2 bits (87), Expect = 7e-04
Identities = 10/42 (23%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR 42
G ++G+AG++E + + A + FN++E + + +K+
Sbjct: 194 YGLKILGTAGTEEGQKIVLQNGA-HEVFNHREV-NYIDKIKK 233
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342 | Back alignment and structure |
|---|
Score = 36.8 bits (86), Expect = 8e-04
Identities = 28/173 (16%), Positives = 42/173 (24%), Gaps = 60/173 (34%)
Query: 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALK-----RG------------ 43
MG V+ E +K+ A D +E A++ G
Sbjct: 183 MGAKVIAVVNRTAATEFVKSVGA-DIVLPLEE--GWAKAVREATGGAGVDMVVDPIGGPA 239
Query: 44 --QNARCSA-------------SKHETP-----RENCSM----WNDLTYSK------FLD 73
R A N S+ W + +
Sbjct: 240 FDDAVRTLASEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQA 299
Query: 74 VVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDLDSCLVVLEP 126
+ L+ EG V + L AL G+ GK +VL P
Sbjct: 300 GLEKLVAEGMRPPVSARI-PLSEGRQALQDFADGKVYGK---------MVLVP 342
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 129 | |||
| 4eez_A | 348 | Alcohol dehydrogenase 1; site-saturation mutagenes | 99.69 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 99.63 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 99.61 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 99.57 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 99.55 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 99.55 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 99.54 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 99.53 | |
| 3jv7_A | 345 | ADH-A; dehydrogenase, nucleotide binding, rossmann | 99.52 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 99.51 | |
| 4a2c_A | 346 | Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc | 99.51 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 99.49 | |
| 1h2b_A | 359 | Alcohol dehydrogenase; oxidoreductase, archaea, hy | 99.48 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 99.48 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 99.48 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 99.48 | |
| 4dvj_A | 363 | Putative zinc-dependent alcohol dehydrogenase Pro; | 99.47 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 99.47 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 99.47 | |
| 3fpc_A | 352 | NADP-dependent alcohol dehydrogenase; oxydoreducta | 99.46 | |
| 3nx4_A | 324 | Putative oxidoreductase; csgid, structural genomic | 99.46 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 99.46 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 99.45 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 99.45 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 99.45 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 99.45 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 99.44 | |
| 1pl8_A | 356 | Human sorbitol dehydrogenase; NAD, oxidoreductase; | 99.43 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 99.43 | |
| 2h6e_A | 344 | ADH-4, D-arabinose 1-dehydrogenase; rossman fold, | 99.43 | |
| 1vj0_A | 380 | Alcohol dehydrogenase, zinc-containing; TM0436, st | 99.42 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 99.42 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 99.41 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 99.41 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 99.41 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 99.4 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 99.4 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 99.39 | |
| 1f8f_A | 371 | Benzyl alcohol dehydrogenase; rossmann fold, oxido | 99.38 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 99.38 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 99.38 | |
| 4ej6_A | 370 | Putative zinc-binding dehydrogenase; structural ge | 99.37 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.37 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 99.36 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 99.36 | |
| 4a27_A | 349 | Synaptic vesicle membrane protein VAT-1 homolog-L; | 99.35 | |
| 3uko_A | 378 | Alcohol dehydrogenase class-3; alcohol dehydrogena | 99.35 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 99.34 | |
| 3iup_A | 379 | Putative NADPH:quinone oxidoreductase; YP_296108.1 | 99.34 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 99.33 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 99.32 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 99.32 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 99.31 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 99.31 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 99.29 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 99.28 | |
| 1tt7_A | 330 | YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st | 99.27 | |
| 1zsy_A | 357 | Mitochondrial 2-enoyl thioester reductase; medium- | 99.23 | |
| 1cdo_A | 374 | Alcohol dehydrogenase; oxidoreductase, oxidoreduct | 99.22 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 99.21 | |
| 1gu7_A | 364 | Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s | 99.2 | |
| 3goh_A | 315 | Alcohol dehydrogenase, zinc-containing; NP_718042. | 99.2 | |
| 1e3i_A | 376 | Alcohol dehydrogenase, class II; HET: NAD; 2.08A { | 99.2 | |
| 1kol_A | 398 | Formaldehyde dehydrogenase; oxidoreductase; HET: N | 99.19 | |
| 2jhf_A | 374 | Alcohol dehydrogenase E chain; oxidoreductase, met | 99.19 | |
| 2fzw_A | 373 | Alcohol dehydrogenase class III CHI chain; S-nitro | 99.18 | |
| 1p0f_A | 373 | NADP-dependent alcohol dehydrogenase; ADH topology | 99.18 | |
| 2dph_A | 398 | Formaldehyde dismutase; dismutation of aldehydes, | 99.11 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 99.07 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 98.96 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 97.97 |
| >4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=1.5e-16 Score=115.31 Aligned_cols=115 Identities=17% Similarity=0.242 Sum_probs=87.9
Q ss_pred CcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc------------------------------ccEEEecCC
Q 039636 2 GCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------------------GQNARCSAS 51 (129)
Q Consensus 2 Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~------------------------------G~~v~~G~~ 51 (129)
|++||+++++++|+++++ ++|+++++||++ .++.+.+++ |+++.+|..
T Consensus 188 g~~Vi~~~~~~~r~~~~~-~~Ga~~~i~~~~-~~~~~~v~~~t~g~g~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~ 265 (348)
T 4eez_A 188 GAKVIAVDINQDKLNLAK-KIGADVTINSGD-VNPVDEIKKITGGLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVP 265 (348)
T ss_dssp CCEEEEEESCHHHHHHHH-HTTCSEEEEC-C-CCHHHHHHHHTTSSCEEEEEECCSCHHHHHHHHHTEEEEEEEEECCCC
T ss_pred CCEEEEEECcHHHhhhhh-hcCCeEEEeCCC-CCHHHHhhhhcCCCCceEEEEeccCcchhheeheeecCCceEEEEecc
Confidence 679999999999999998 999999999998 788887766 666666542
Q ss_pred CCCCC-CCCcceeccc-------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEEeCC
Q 039636 52 KHETP-RENCSMWNDL-------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDLDS 119 (129)
Q Consensus 52 ~~~~~-~~~~l~~~~~-------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~~~ 119 (129)
..... ..+.++.++. ...+.++++++++.+|.|+|.+. +|||+++++||+.+++++..||+||+++.
T Consensus 266 ~~~~~~~~~~~~~~~~~i~gs~~~~~~~~~~~~~l~~~g~i~p~~~-~~~l~~~~~A~~~l~~g~~~GKvVl~~sk 340 (348)
T 4eez_A 266 NTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQFGAEGKVKPIVA-TRKLEEINDIIDEMKAGKIEGRMVIDFTK 340 (348)
T ss_dssp SCEEEECHHHHHHSCCEEEECCSCCHHHHHHHHHHHHTTSCCCCEE-EECGGGHHHHHHHHHTTCCSSEEEEECC-
T ss_pred CCCCccCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHcCCCEEEEE-EEeHHHHHHHHHHHHCCCCccEEEEEccc
Confidence 11110 0012222221 44667899999999999998764 58999999999999999999999999963
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=7.6e-15 Score=105.99 Aligned_cols=117 Identities=18% Similarity=0.243 Sum_probs=90.5
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~ 51 (129)
+|++|++++++++++++++ ++|+++++|+++ +++.+.+.+ |+++.+|..
T Consensus 172 ~Ga~Vi~~~~~~~~~~~~~-~~ga~~~~~~~~-~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~ 249 (334)
T 3qwb_A 172 KGAHTIAVASTDEKLKIAK-EYGAEYLINASK-EDILRQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKGVFVSFGNA 249 (334)
T ss_dssp TTCEEEEEESSHHHHHHHH-HTTCSEEEETTT-SCHHHHHHHHTTTSCEEEEEECCGGGGHHHHHHHEEEEEEEEECCCT
T ss_pred CCCEEEEEeCCHHHHHHHH-HcCCcEEEeCCC-chHHHHHHHHhCCCCceEEEECCChHHHHHHHHHhccCCEEEEEcCC
Confidence 4899999999999999998 999999999987 777766543 889988863
Q ss_pred CCCCCC--------CC-cceeccc--------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEE
Q 039636 52 KHETPR--------EN-CSMWNDL--------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQA 114 (129)
Q Consensus 52 ~~~~~~--------~~-~l~~~~~--------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvv 114 (129)
...... ++ .+..... .+.+.++++++++.+|.+++.+..+|+|+++++||+.+.+++..||+|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvv 329 (334)
T 3qwb_A 250 SGLIPPFSITRLSPKNITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKLNIKIYKTYPLRDYRTAAADIESRKTVGKLV 329 (334)
T ss_dssp TCCCCCBCGGGGTTTTCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHTTCCCBEEE
T ss_pred CCCCCCcchhhhhhCceEEEEEEeccccCCHHHHHHHHHHHHHHHHCCCccCceeeEEcHHHHHHHHHHHHhCCCceEEE
Confidence 221111 11 1111000 234566899999999999998877899999999999999999999999
Q ss_pred EEeCC
Q 039636 115 LDLDS 119 (129)
Q Consensus 115 v~~~~ 119 (129)
|++++
T Consensus 330 i~~~q 334 (334)
T 3qwb_A 330 LEIPQ 334 (334)
T ss_dssp EECCC
T ss_pred EecCC
Confidence 99853
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=5.8e-15 Score=106.83 Aligned_cols=116 Identities=16% Similarity=0.174 Sum_probs=89.5
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc----------------------------ccEEEecCCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR----------------------------GQNARCSASK 52 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~----------------------------G~~v~~G~~~ 52 (129)
+|++|++++++++|+++++ ++|+++++|+++ .++.+.+++ |+++.+|...
T Consensus 189 ~Ga~Vi~~~~~~~~~~~~~-~lGa~~~i~~~~-~~~~~~~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~ 266 (340)
T 3s2e_A 189 MGLRVAAVDIDDAKLNLAR-RLGAEVAVNARD-TDPAAWLQKEIGGAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPP 266 (340)
T ss_dssp TTCEEEEEESCHHHHHHHH-HTTCSEEEETTT-SCHHHHHHHHHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCS
T ss_pred CCCeEEEEeCCHHHHHHHH-HcCCCEEEeCCC-cCHHHHHHHhCCCCCEEEEeCCCHHHHHHHHHHhccCCEEEEeCCCC
Confidence 5899999999999999998 999999999987 777766653 7777777622
Q ss_pred CCCCCC-Ccceeccc-------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEEeCC
Q 039636 53 HETPRE-NCSMWNDL-------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDLDS 119 (129)
Q Consensus 53 ~~~~~~-~~l~~~~~-------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~~~ 119 (129)
...... ..++.++. ...+.++++++++.+|.+++.+.. ++|+++++||+.+.+++..||+||++++
T Consensus 267 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~~~-~~l~~~~~A~~~~~~~~~~Gkvvv~~~~ 340 (340)
T 3s2e_A 267 GDFGTPIFDVVLKGITIRGSIVGTRSDLQESLDFAAHGDVKATVST-AKLDDVNDVFGRLREGKVEGRVVLDFSR 340 (340)
T ss_dssp SEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSCCCCEEE-ECGGGHHHHHHHHHTTCCCSEEEEECCC
T ss_pred CCCCCCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHhCCCCceEEE-EeHHHHHHHHHHHHcCCCceEEEEecCC
Confidence 111000 01112211 446788999999999999987654 7999999999999999999999999864
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.5e-14 Score=105.66 Aligned_cols=114 Identities=19% Similarity=0.204 Sum_probs=88.8
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~ 51 (129)
+||+|++++++++++++++ ++|+++++|+.. +++.+.+++ |+++.+|..
T Consensus 212 ~Ga~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~-~~~~~~v~~~~~g~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~ 289 (363)
T 3uog_A 212 TGAEVIVTSSSREKLDRAF-ALGADHGINRLE-EDWVERVYALTGDRGADHILEIAGGAGLGQSLKAVAPDGRISVIGVL 289 (363)
T ss_dssp TTCEEEEEESCHHHHHHHH-HHTCSEEEETTT-SCHHHHHHHHHTTCCEEEEEEETTSSCHHHHHHHEEEEEEEEEECCC
T ss_pred cCCEEEEEecCchhHHHHH-HcCCCEEEcCCc-ccHHHHHHHHhCCCCceEEEECCChHHHHHHHHHhhcCCEEEEEecC
Confidence 5899999999999999998 999999999654 567766654 888888763
Q ss_pred CCCCCC--CCcceeccc-------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEEe
Q 039636 52 KHETPR--ENCSMWNDL-------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDL 117 (129)
Q Consensus 52 ~~~~~~--~~~l~~~~~-------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~ 117 (129)
...... ...++.++. ...+.++++++++.+|.+++.+..+|+|+++++||+.+.+++ .||+||++
T Consensus 290 ~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~-~gKvvi~~ 363 (363)
T 3uog_A 290 EGFEVSGPVGPLLLKSPVVQGISVGHRRALEDLVGAVDRLGLKPVIDMRYKFTEVPEALAHLDRGP-FGKVVIEF 363 (363)
T ss_dssp SSCEECCBTTHHHHTCCEEEECCCCCHHHHHHHHHHHHHHTCCCCEEEEEEGGGHHHHHHTGGGCC-SBEEEEEC
T ss_pred CCcccCcCHHHHHhCCcEEEEEecCCHHHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCC-CccEEEeC
Confidence 221111 112222222 346788999999999999998888899999999999999999 99999975
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=8.7e-14 Score=100.44 Aligned_cols=115 Identities=42% Similarity=0.636 Sum_probs=89.6
Q ss_pred CCcEEEEEeCChHHHHHH-HHhcCCCEEEeCCCcccHHHHhcc----------------------------ccEEEecCC
Q 039636 1 MGCYVVGSAGSKEKIERL-KNKFAFDDAFNYKEEQDLVTALKR----------------------------GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~-~~~lGad~vi~~~~~~~~~~~v~~----------------------------G~~v~~G~~ 51 (129)
+|++|+++++++++++.+ + ++|+++++|+++ .++.+.+.+ |+++.+|..
T Consensus 173 ~Ga~Vi~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~iv~~G~~ 250 (336)
T 4b7c_A 173 KGCRVVGIAGGAEKCRFLVE-ELGFDGAIDYKN-EDLAAGLKRECPKGIDVFFDNVGGEILDTVLTRIAFKARIVLCGAI 250 (336)
T ss_dssp TTCEEEEEESSHHHHHHHHH-TTCCSEEEETTT-SCHHHHHHHHCTTCEEEEEESSCHHHHHHHHTTEEEEEEEEECCCG
T ss_pred CCCEEEEEeCCHHHHHHHHH-HcCCCEEEECCC-HHHHHHHHHhcCCCceEEEECCCcchHHHHHHHHhhCCEEEEEeec
Confidence 489999999999999998 6 999999999987 777766543 889988862
Q ss_pred CC----CC---CC-CCcceeccc------------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccc
Q 039636 52 KH----ET---PR-ENCSMWNDL------------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVG 111 (129)
Q Consensus 52 ~~----~~---~~-~~~l~~~~~------------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~G 111 (129)
.. .. +. ...++.++. ...+.++++++++.+|.|++.+..+++|+++++||+.+.+++..|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~g 330 (336)
T 4b7c_A 251 SQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLAEGKLQSREDIVEGLETFPETLLKLFSGENFG 330 (336)
T ss_dssp GGGC------CCTTTTHHHHTTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCCEEEEECGGGHHHHHHHHHTTCCCS
T ss_pred ccccCCcccccchhHHHHHhCCcEEEEEEhhhhhhhhHHHHHHHHHHHHCCCcccceeeecCHHHHHHHHHHHHcCCCCc
Confidence 20 10 10 011222211 234788999999999999999888899999999999999999999
Q ss_pred eEEEEe
Q 039636 112 KQALDL 117 (129)
Q Consensus 112 kvvv~~ 117 (129)
|+||++
T Consensus 331 Kvvi~~ 336 (336)
T 4b7c_A 331 KLVLKV 336 (336)
T ss_dssp EEEEEC
T ss_pred eEEEeC
Confidence 999975
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=6.5e-14 Score=100.80 Aligned_cols=114 Identities=17% Similarity=0.223 Sum_probs=88.6
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~ 51 (129)
+|++|++++++++++++++ ++|+++++|+++ .++.+.+.+ |+++.+|..
T Consensus 164 ~Ga~Vi~~~~~~~~~~~~~-~~Ga~~~~~~~~-~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~g~~ 241 (325)
T 3jyn_A 164 LGAKLIGTVSSPEKAAHAK-ALGAWETIDYSH-EDVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDSVAPRGLVVSFGNA 241 (325)
T ss_dssp HTCEEEEEESSHHHHHHHH-HHTCSEEEETTT-SCHHHHHHHHTTTCCEEEEEESSCGGGHHHHHTTEEEEEEEEECCCT
T ss_pred CCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCC-ccHHHHHHHHhCCCCceEEEECCChHHHHHHHHHhcCCCEEEEEecC
Confidence 3899999999999999998 999999999987 777766653 888888863
Q ss_pred CCCCCC--CC------cceecc---------c-chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceE
Q 039636 52 KHETPR--EN------CSMWND---------L-TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQ 113 (129)
Q Consensus 52 ~~~~~~--~~------~l~~~~---------~-~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkv 113 (129)
...... .. .+.... . ...+.++++++++.+|.+++.+..+|||+++++||+.+.+++..||+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~Gkv 321 (325)
T 3jyn_A 242 SGPVSGVNLGILAQKDSVYVTRPTLGSYANNAQNLQTMADELFDMLASGKLKVDGIEQYALKDAAKAQIELSARRTTGST 321 (325)
T ss_dssp TCCCCSCCTHHHHHTTSCEEECCCHHHHSCSTTHHHHHHHHHHHHHHTTSSCCCCCEEEEGGGHHHHHHHHHTTCCCSCE
T ss_pred CCCCCCCCHHHHhhcCcEEEEeeeeeeecCCHHHHHHHHHHHHHHHHCCCeeCccccEEcHHHHHHHHHHHHcCCCCceE
Confidence 221111 00 111100 0 34566779999999999999887789999999999999999999999
Q ss_pred EEE
Q 039636 114 ALD 116 (129)
Q Consensus 114 vv~ 116 (129)
||.
T Consensus 322 vl~ 324 (325)
T 3jyn_A 322 ILI 324 (325)
T ss_dssp EEE
T ss_pred EEe
Confidence 986
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=99.54 E-value=8.9e-14 Score=100.93 Aligned_cols=118 Identities=23% Similarity=0.213 Sum_probs=86.2
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~ 51 (129)
+||+|++++++++++++++ ++|+++++|+++ ++.+.+++ |+++.+|..
T Consensus 174 ~Ga~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~--~~~~~~~~~~~~g~Dvv~d~~g~~~~~~~~~~~l~~~G~iv~~~~~ 250 (346)
T 3fbg_A 174 YGLRVITTASRNETIEWTK-KMGADIVLNHKE--SLLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAF 250 (346)
T ss_dssp TTCEEEEECCSHHHHHHHH-HHTCSEEECTTS--CHHHHHHHHTCCCEEEEEESSCHHHHHHHHHHHEEEEEEEEESSCC
T ss_pred cCCEEEEEeCCHHHHHHHH-hcCCcEEEECCc--cHHHHHHHhCCCCccEEEECCCchHHHHHHHHHhccCCEEEEECCC
Confidence 5899999999999999998 899999999875 45555433 888777651
Q ss_pred CCCCC-C----CC-cceeccc------------chHHHHHHHHHHHHcCCceeeeeeec---CcccHHHHHHHHHcCCcc
Q 039636 52 KHETP-R----EN-CSMWNDL------------TYSKFLDVVLPLIREGKIVYVEDIVE---GLENAPAALLGLFSGRNV 110 (129)
Q Consensus 52 ~~~~~-~----~~-~l~~~~~------------~~~~~~~~~~~~~~~g~i~~~~~~~~---~l~~~~~a~~~~~~~~~~ 110 (129)
..... . ++ .+..... ...+.++++++++.+|.|++.+..++ +|+++++||+.+.+++..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~~~l~~~~~A~~~~~~g~~~ 330 (346)
T 3fbg_A 251 ENDQDLNALKPKSLSFSHEFMFARPLNQTDDMIKHHEYLEDITNKVEQNIYQPTTTKVIEGLTTENIYQAHQILESNTMI 330 (346)
T ss_dssp SSCBCGGGGTTTTCEEEECCTTHHHHTTCTTTHHHHHHHHHHHHHHHTTSSCCCEEEEEESCCHHHHHHHHHHHHTTCCC
T ss_pred CCCCccccccccceEEEEEEEecccccchhhHHHHHHHHHHHHHHHHCCCEECCccceecCCCHHHHHHHHHHHhcCCcc
Confidence 11100 0 11 1111000 23577899999999999999887666 999999999999999999
Q ss_pred ceEEEEeCCCc
Q 039636 111 GKQALDLDSCL 121 (129)
Q Consensus 111 Gkvvv~~~~~~ 121 (129)
||+||++.++.
T Consensus 331 GKvvl~~~~~~ 341 (346)
T 3fbg_A 331 GKLVINLNEGH 341 (346)
T ss_dssp SEEEEEC----
T ss_pred eEEEEecCCcc
Confidence 99999997653
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.53 E-value=4.2e-14 Score=102.96 Aligned_cols=115 Identities=25% Similarity=0.298 Sum_probs=87.8
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc----------------------------ccEEEecCCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR----------------------------GQNARCSASK 52 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~----------------------------G~~v~~G~~~ 52 (129)
+|++|++++++++++++++ ++|+++++|+++ .++.+.+.+ |+++.+|...
T Consensus 191 ~Ga~Vi~~~~~~~~~~~~~-~lGa~~~~~~~~-~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~g~~~ 268 (353)
T 4dup_A 191 FGAEVYATAGSTGKCEACE-RLGAKRGINYRS-EDFAAVIKAETGQGVDIILDMIGAAYFERNIASLAKDGCLSIIAFLG 268 (353)
T ss_dssp TTCEEEEEESSHHHHHHHH-HHTCSEEEETTT-SCHHHHHHHHHSSCEEEEEESCCGGGHHHHHHTEEEEEEEEECCCTT
T ss_pred cCCEEEEEeCCHHHHHHHH-hcCCCEEEeCCc-hHHHHHHHHHhCCCceEEEECCCHHHHHHHHHHhccCCEEEEEEecC
Confidence 4899999999999999998 999999999987 677666543 8888887622
Q ss_pred CCC-C-C-CCcceeccc-----------------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccce
Q 039636 53 HET-P-R-ENCSMWNDL-----------------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGK 112 (129)
Q Consensus 53 ~~~-~-~-~~~l~~~~~-----------------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gk 112 (129)
... . . ...++.++. ...+.++++++++.+|.|++.+..+|+|+++++||+.+.+++..||
T Consensus 269 ~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~l~~~~~~gK 348 (353)
T 4dup_A 269 GAVAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHKVFAFEDVADAHRLLEEGSHVGK 348 (353)
T ss_dssp CSEEEEEECHHHHHTTCEEEECCSTTSCHHHHHHHHHHHHHHTHHHHHHTSSCCCEEEEEEGGGHHHHHHHHHHTCCSSE
T ss_pred CCcccCCCHHHHHhcCceEEEEeccccchhhhHHHHHHHHHHHHHHHHCCCccCCcceEEeHHHHHHHHHHHHhCCCCce
Confidence 211 0 0 001111111 1233478899999999999988888999999999999999999999
Q ss_pred EEEEe
Q 039636 113 QALDL 117 (129)
Q Consensus 113 vvv~~ 117 (129)
+||++
T Consensus 349 vvl~~ 353 (353)
T 4dup_A 349 VMLTV 353 (353)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 99975
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=2.2e-13 Score=98.69 Aligned_cols=112 Identities=15% Similarity=0.125 Sum_probs=85.7
Q ss_pred CcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc------------------------------ccEEEecCC
Q 039636 2 GCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------------------GQNARCSAS 51 (129)
Q Consensus 2 Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~------------------------------G~~v~~G~~ 51 (129)
|++|++++++++|+++++ ++|+++++++++ ++.+.+++ |+++.+|..
T Consensus 196 ~~~Vi~~~~~~~~~~~~~-~lGa~~~i~~~~--~~~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~ 272 (345)
T 3jv7_A 196 AARVIAVDLDDDRLALAR-EVGADAAVKSGA--GAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIH 272 (345)
T ss_dssp CCEEEEEESCHHHHHHHH-HTTCSEEEECST--THHHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCC
T ss_pred CCEEEEEcCCHHHHHHHH-HcCCCEEEcCCC--cHHHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCC
Confidence 579999999999999998 999999999865 56555543 888888863
Q ss_pred CCCCCC-CCcceeccc-------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEEe
Q 039636 52 KHETPR-ENCSMWNDL-------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDL 117 (129)
Q Consensus 52 ~~~~~~-~~~l~~~~~-------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~ 117 (129)
...... +..++.++. ...+.++++++++.+|.+++.. .+|+|+++++||+.+.+++..||+||++
T Consensus 273 ~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~Gkvvv~p 345 (345)
T 3jv7_A 273 AGAHAKVGFFMIPFGASVVTPYWGTRSELMEVVALARAGRLDIHT-ETFTLDEGPAAYRRLREGSIRGRGVVVP 345 (345)
T ss_dssp TTCCEEESTTTSCTTCEEECCCSCCHHHHHHHHHHHHTTCCCCCE-EEECSTTHHHHHHHHHHTCCSSEEEECC
T ss_pred CCCCCCcCHHHHhCCCEEEEEecCCHHHHHHHHHHHHcCCCceEE-EEEcHHHHHHHHHHHHcCCCceeEEeCC
Confidence 221110 112222221 3467889999999999999855 5689999999999999999999999863
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=99.51 E-value=2.9e-13 Score=97.98 Aligned_cols=119 Identities=10% Similarity=0.076 Sum_probs=88.5
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~ 51 (129)
+||+|++++++++++++++ ++|+++++|+++ .++.+.+++ |+++.+|..
T Consensus 168 ~Ga~Vi~~~~~~~~~~~~~-~lga~~~~~~~~-~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~G~~ 245 (340)
T 3gms_A 168 LNFRLIAVTRNNKHTEELL-RLGAAYVIDTST-APLYETVMELTNGIGADAAIDSIGGPDGNELAFSLRPNGHFLTIGLL 245 (340)
T ss_dssp HTCEEEEEESSSTTHHHHH-HHTCSEEEETTT-SCHHHHHHHHTTTSCEEEEEESSCHHHHHHHHHTEEEEEEEEECCCT
T ss_pred cCCEEEEEeCCHHHHHHHH-hCCCcEEEeCCc-ccHHHHHHHHhCCCCCcEEEECCCChhHHHHHHHhcCCCEEEEEeec
Confidence 3899999999999999998 899999999987 777766653 888888863
Q ss_pred CCCCCC------CCcc-----eecc------c-chHHHHHHHHHHHHcCCcee-eeeeecCcccHHHHHHHHHcCCc-cc
Q 039636 52 KHETPR------ENCS-----MWND------L-TYSKFLDVVLPLIREGKIVY-VEDIVEGLENAPAALLGLFSGRN-VG 111 (129)
Q Consensus 52 ~~~~~~------~~~l-----~~~~------~-~~~~~~~~~~~~~~~g~i~~-~~~~~~~l~~~~~a~~~~~~~~~-~G 111 (129)
...... ...+ ..+. . ...+.++++++++.+|.+++ .+..+|||+++++||+.+.+++. .|
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~i~~~~~l~~~~~A~~~~~~~~~~~G 325 (340)
T 3gms_A 246 SGIQVNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIRLVENEQLRFMKVHSTYELADVKAAVDVVQSAEKTKG 325 (340)
T ss_dssp TSCCCCHHHHHHTSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCCEEEEEEGGGHHHHHHHHHCTTCCSS
T ss_pred CCCCCCHHHhhhcccceEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcCCCccccccEEEeHHHHHHHHHHHHhcCCCCC
Confidence 221111 0000 0010 0 34578899999999999987 45567899999999999999885 59
Q ss_pred eEEEEeCCCc
Q 039636 112 KQALDLDSCL 121 (129)
Q Consensus 112 kvvv~~~~~~ 121 (129)
|+|+++.+..
T Consensus 326 Kvvl~~~~~~ 335 (340)
T 3gms_A 326 KVFLTSYEGH 335 (340)
T ss_dssp EEEEECC---
T ss_pred eEEEEEeccc
Confidence 9999997653
|
| >4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.51 E-value=8.9e-14 Score=100.64 Aligned_cols=114 Identities=18% Similarity=0.116 Sum_probs=82.6
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc------------------------------ccEEEec
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------------------GQNARCS 49 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~------------------------------G~~v~~G 49 (129)
+|+ .+++++.+++|+++++ ++|+++++|+++ .++.+.+++ |+++.+|
T Consensus 183 ~G~~~vi~~~~~~~k~~~a~-~lGa~~~i~~~~-~~~~~~~~~~~~~~g~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g 260 (346)
T 4a2c_A 183 LGAKSVTAIDISSEKLALAK-SFGAMQTFNSSE-MSAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVG 260 (346)
T ss_dssp TTCSEEEEEESCHHHHHHHH-HTTCSEEEETTT-SCHHHHHHHHGGGCSSEEEEECSCSHHHHHHHHHHCCTTCEEEECC
T ss_pred cCCcEEEEEechHHHHHHHH-HcCCeEEEeCCC-CCHHHHHHhhcccCCcccccccccccchhhhhhheecCCeEEEEEe
Confidence 477 5678888999999998 999999999987 666555443 6777776
Q ss_pred CCCCCC-CC-C--Ccceeccc------------chHHHHHHHHHHHHcCCcee--eeeeecCcccHHHHHHHHHcCCccc
Q 039636 50 ASKHET-PR-E--NCSMWNDL------------TYSKFLDVVLPLIREGKIVY--VEDIVEGLENAPAALLGLFSGRNVG 111 (129)
Q Consensus 50 ~~~~~~-~~-~--~~l~~~~~------------~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~G 111 (129)
...... .. . +.++.++. ...+.++++++++.+|++++ .+..+|+|+++++||+.+.+++..|
T Consensus 261 ~~~~~~~~~~~~~~~~~~k~~~i~G~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~lI~~~~~l~~~~~A~~~l~~~~~~G 340 (346)
T 4a2c_A 261 TLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDIARNAMPG 340 (346)
T ss_dssp CCSSCEEECHHHHHHHHHHTCEEEECCTTCCSSTTCHHHHHHHHHHHTTCSCCGGGEEEEECHHHHHHHHHHHTTSCCCS
T ss_pred ccCCCccccccCHHHHhhceeEEEEEeccccCcchHHHHHHHHHHHHcCCCCCCccEeEEEeHHHHHHHHHHHHcCCCce
Confidence 522211 00 0 01111111 23567899999999999854 4556789999999999999999999
Q ss_pred eEEEE
Q 039636 112 KQALD 116 (129)
Q Consensus 112 kvvv~ 116 (129)
|+||.
T Consensus 341 KvVl~ 345 (346)
T 4a2c_A 341 KVLLI 345 (346)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 99985
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=99.49 E-value=1.8e-13 Score=99.02 Aligned_cols=116 Identities=25% Similarity=0.285 Sum_probs=87.5
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc----------------------------ccEEEecCCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR----------------------------GQNARCSASK 52 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~----------------------------G~~v~~G~~~ 52 (129)
+|++|++++++++++++++ ++|+++++|+++ +++.+.+++ |+++.+|...
T Consensus 187 ~Ga~Vi~~~~~~~~~~~~~-~lGa~~~~d~~~-~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 264 (339)
T 1rjw_A 187 MGLNVVAVDIGDEKLELAK-ELGADLVVNPLK-EDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPP 264 (339)
T ss_dssp TTCEEEEECSCHHHHHHHH-HTTCSEEECTTT-SCHHHHHHHHHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCS
T ss_pred cCCEEEEEeCCHHHHHHHH-HCCCCEEecCCC-ccHHHHHHHHhCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEecccC
Confidence 4899999999999999998 899999999886 566555432 7888877622
Q ss_pred CCCCC-CCcceeccc-------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEEeCC
Q 039636 53 HETPR-ENCSMWNDL-------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDLDS 119 (129)
Q Consensus 53 ~~~~~-~~~l~~~~~-------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~~~ 119 (129)
..... ...++.++. ...+.++++++++.+|.+++.+. +|||+++++||+.+.+++..||+||++++
T Consensus 265 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~~-~~~l~~~~~A~~~~~~~~~~gKvvi~~~~ 338 (339)
T 1rjw_A 265 EEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKVKTIIE-VQPLEKINEVFDRMLKGQINGRVVLTLED 338 (339)
T ss_dssp SEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSCCCCEE-EEEGGGHHHHHHHHHTTCCSSEEEEECCC
T ss_pred CCCccCHHHHHhCCcEEEEeccCCHHHHHHHHHHHHcCCCCccEE-EEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence 11100 001222221 34567899999999999998754 58999999999999999889999999865
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=99.48 E-value=4.2e-13 Score=97.87 Aligned_cols=112 Identities=14% Similarity=0.110 Sum_probs=83.5
Q ss_pred CcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc------------------------------ccEEEecCC
Q 039636 2 GCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------------------GQNARCSAS 51 (129)
Q Consensus 2 Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~------------------------------G~~v~~G~~ 51 (129)
|++|++++++++|+++++ ++|+++++|+++ + +.+.+++ |+++.+|..
T Consensus 211 Ga~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~-~-~~~~v~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~~~G~~v~~g~~ 287 (359)
T 1h2b_A 211 PATVIALDVKEEKLKLAE-RLGADHVVDARR-D-PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYG 287 (359)
T ss_dssp CCEEEEEESSHHHHHHHH-HTTCSEEEETTS-C-HHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCCS
T ss_pred CCeEEEEeCCHHHHHHHH-HhCCCEEEeccc-h-HHHHHHHHhCCCCCcEEEECCCCchHHHHHHHhhcCCCEEEEEeCC
Confidence 899999999999999998 999999999987 5 5544432 355555542
Q ss_pred CCCCCCCCcceeccc-------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEEe
Q 039636 52 KHETPRENCSMWNDL-------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDL 117 (129)
Q Consensus 52 ~~~~~~~~~l~~~~~-------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~ 117 (129)
.........++.++. ...+.++++++++.+|.+++.+ .+|+|+++++||+.+.+++..||+||++
T Consensus 288 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 359 (359)
T 1h2b_A 288 GELRFPTIRVISSEVSFEGSLVGNYVELHELVTLALQGKVRVEV-DIHKLDEINDVLERLEKGEVLGRAVLIP 359 (359)
T ss_dssp SCCCCCHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSCCCCE-EEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred CCCCCCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCCcceE-EEEeHHHHHHHHHHHHcCCCceEEEeeC
Confidence 111111001222221 3467789999999999999988 7799999999999999999899999874
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.48 E-value=3.9e-13 Score=97.37 Aligned_cols=115 Identities=29% Similarity=0.343 Sum_probs=88.0
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~ 51 (129)
+|++|+++++++++++.++ ++|+++++|+++ +++.+.+.+ |+++.+|..
T Consensus 190 ~G~~Vi~~~~~~~~~~~~~-~~ga~~~~d~~~-~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~ 267 (343)
T 2eih_A 190 FGARVIATAGSEDKLRRAK-ALGADETVNYTH-PDWPKEVRRLTGGKGADKVVDHTGALYFEGVIKATANGGRIAIAGAS 267 (343)
T ss_dssp TTCEEEEEESSHHHHHHHH-HHTCSEEEETTS-TTHHHHHHHHTTTTCEEEEEESSCSSSHHHHHHHEEEEEEEEESSCC
T ss_pred CCCEEEEEeCCHHHHHHHH-hcCCCEEEcCCc-ccHHHHHHHHhCCCCceEEEECCCHHHHHHHHHhhccCCEEEEEecC
Confidence 4899999999999999997 899999999887 666555432 788888762
Q ss_pred CCCCC--CCCcceeccc-------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEEe
Q 039636 52 KHETP--RENCSMWNDL-------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDL 117 (129)
Q Consensus 52 ~~~~~--~~~~l~~~~~-------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~ 117 (129)
..... ....++.++. ...+.++++++++.+|.+++.+..+|+|+++++||+.+.+++..||+|+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 342 (343)
T 2eih_A 268 SGYEGTLPFAHVFYRQLSILGSTMASKSRLFPILRFVEEGKLKPVVGQVLPLEAAAEGHRLLEERRVFGKVVLQV 342 (343)
T ss_dssp CSCCCCCCTTHHHHTTCEEEECCSCCGGGHHHHHHHHHHTSSCCCEEEEEEGGGHHHHHHHHHTTCSSSEEEEEC
T ss_pred CCCcCccCHHHHHhCCcEEEEecCccHHHHHHHHHHHHcCCCCCceeEEeeHHHHHHHHHHHHcCCCceEEEEec
Confidence 22111 1111222221 345678999999999999998877899999999999999998899999975
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=99.48 E-value=2.6e-13 Score=99.36 Aligned_cols=116 Identities=19% Similarity=0.130 Sum_probs=86.8
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-------------------------ccEEEecCCCCCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-------------------------GQNARCSASKHET 55 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-------------------------G~~v~~G~~~~~~ 55 (129)
+|++|++++.+++++++++ ++|+++++|+++ .++.+.+.. |+++.+|......
T Consensus 217 ~Ga~Vi~~~~~~~~~~~a~-~lGa~~vi~~~~-~~~~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~ 294 (369)
T 1uuf_A 217 MGAHVVAFTTSEAKREAAK-ALGADEVVNSRN-ADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPH 294 (369)
T ss_dssp TTCEEEEEESSGGGHHHHH-HHTCSEEEETTC-HHHHHTTTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC----
T ss_pred CCCEEEEEeCCHHHHHHHH-HcCCcEEecccc-HHHHHHhhcCCCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCCCc
Confidence 5899999999999999998 899999999887 555544432 8888887632211
Q ss_pred --CCCCcceeccc-------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEEeCC
Q 039636 56 --PRENCSMWNDL-------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDLDS 119 (129)
Q Consensus 56 --~~~~~l~~~~~-------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~~~ 119 (129)
.....++.++. ...+.++++++++.+|.+++.+. +|||+++++||+.+.+++..||+|+++++
T Consensus 295 ~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~~i~-~~~l~~~~~A~~~~~~~~~~gKvvi~~~~ 366 (369)
T 1uuf_A 295 KSPEVFNLIMKRRAIAGSMIGGIPETQEMLDFCAEHGIVADIE-MIRADQINEAYERMLRGDVKYRFVIDNRT 366 (369)
T ss_dssp ---CHHHHHTTTCEEEECCSCCHHHHHHHHHHHHHHTCCCCEE-EECGGGHHHHHHHHHTTCSSSEEEEEGGG
T ss_pred cccCHHHHHhCCcEEEEeecCCHHHHHHHHHHHHhCCCCcceE-EEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence 11001222221 33567899999999999998875 58999999999999999889999999864
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.48 E-value=5.7e-13 Score=96.56 Aligned_cols=112 Identities=18% Similarity=0.164 Sum_probs=83.0
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~ 51 (129)
+|++|++++++++++++++ ++|+++++|++ +++.+.+++ |+++.+|..
T Consensus 183 ~Ga~Vi~~~~~~~~~~~~~-~~ga~~v~~~~--~~~~~~v~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~G~~ 259 (342)
T 4eye_A 183 MGAKVIAVVNRTAATEFVK-SVGADIVLPLE--EGWAKAVREATGGAGVDMVVDPIGGPAFDDAVRTLASEGRLLVVGFA 259 (342)
T ss_dssp TTCEEEEEESSGGGHHHHH-HHTCSEEEESS--TTHHHHHHHHTTTSCEEEEEESCC--CHHHHHHTEEEEEEEEEC---
T ss_pred cCCEEEEEeCCHHHHHHHH-hcCCcEEecCc--hhHHHHHHHHhCCCCceEEEECCchhHHHHHHHhhcCCCEEEEEEcc
Confidence 5899999999999999998 89999999986 356655543 888888762
Q ss_pred CCCCCC--CCcceeccc----------------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceE
Q 039636 52 KHETPR--ENCSMWNDL----------------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQ 113 (129)
Q Consensus 52 ~~~~~~--~~~l~~~~~----------------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkv 113 (129)
....+. ...++.++. ...+.++++++++.+| +++.+..+|+|+++++||+.+.+++..||+
T Consensus 260 ~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g-l~~~i~~~~~l~~~~~A~~~~~~~~~~gKv 338 (342)
T 4eye_A 260 AGGIPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVAEG-MRPPVSARIPLSEGRQALQDFADGKVYGKM 338 (342)
T ss_dssp -------CCCCGGGTTCEEEECCHHHHHHHCTTHHHHHHHHHHHHHHTT-CCCCEEEEEEGGGHHHHHHHHHTTCCCSEE
T ss_pred CCCCCccCHHHHhhcCCEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcC-CCCCcceEEeHHHHHHHHHHHHhCCCCceE
Confidence 211110 111222211 2346789999999999 999888889999999999999999999999
Q ss_pred EEE
Q 039636 114 ALD 116 (129)
Q Consensus 114 vv~ 116 (129)
||+
T Consensus 339 vl~ 341 (342)
T 4eye_A 339 VLV 341 (342)
T ss_dssp EEE
T ss_pred EEe
Confidence 986
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.47 E-value=6.6e-13 Score=97.02 Aligned_cols=114 Identities=16% Similarity=0.105 Sum_probs=85.8
Q ss_pred CcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCCC
Q 039636 2 GCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSASK 52 (129)
Q Consensus 2 Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~~ 52 (129)
|++|++++++++|+++++ ++|+++++|+++ ++.+.+++ |+++.+|...
T Consensus 197 g~~Vi~~~~~~~~~~~~~-~lGad~vi~~~~--~~~~~v~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~ 273 (363)
T 4dvj_A 197 DLTVIATASRPETQEWVK-SLGAHHVIDHSK--PLAAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLIDDPS 273 (363)
T ss_dssp CSEEEEECSSHHHHHHHH-HTTCSEEECTTS--CHHHHHHTTCSCCEEEEEECSCHHHHHHHHHHHSCTTCEEEECSCCS
T ss_pred CCEEEEEeCCHHHHHHHH-HcCCCEEEeCCC--CHHHHHHHhcCCCceEEEECCCchhhHHHHHHHhcCCCEEEEECCCC
Confidence 789999999999999998 999999999865 56665543 8888776411
Q ss_pred CCCCC----CC-cceeccc------------chHHHHHHHHHHHHcCCceeeeeeec---CcccHHHHHHHHHcCCccce
Q 039636 53 HETPR----EN-CSMWNDL------------TYSKFLDVVLPLIREGKIVYVEDIVE---GLENAPAALLGLFSGRNVGK 112 (129)
Q Consensus 53 ~~~~~----~~-~l~~~~~------------~~~~~~~~~~~~~~~g~i~~~~~~~~---~l~~~~~a~~~~~~~~~~Gk 112 (129)
..... ++ .+..... ...+.++++++++.+|.|++.+..++ +|+++++||+.+.+++..||
T Consensus 274 ~~~~~~~~~k~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~~~l~~~~~A~~~~~~~~~~GK 353 (363)
T 4dvj_A 274 AFDIMLFKRKAVSIHHELMFTRPMFGTPDMSEQGRLLNDVSRLVDEGRLRTTLTNRLSPINAANLKQAHALVESGTARGK 353 (363)
T ss_dssp SCCGGGGTTTTCEEEECCTTHHHHHTCTTTHHHHHHHHHHHHHHHHTSSCCCEEEEECSCSHHHHHHHHHHHHHTCCCSE
T ss_pred ccchHHHhhccceEEEEEeeccccccCcchhhHHHHHHHHHHHHHCCCeeccccceecCCCHHHHHHHHHHHHhCCCceE
Confidence 11100 11 1111000 12577899999999999999887655 99999999999999999999
Q ss_pred EEEEeC
Q 039636 113 QALDLD 118 (129)
Q Consensus 113 vvv~~~ 118 (129)
+||++.
T Consensus 354 vVl~~~ 359 (363)
T 4dvj_A 354 VVIEGF 359 (363)
T ss_dssp EEEECS
T ss_pred EEEeCc
Confidence 999874
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.47 E-value=3.4e-13 Score=96.88 Aligned_cols=114 Identities=21% Similarity=0.147 Sum_probs=85.3
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCccc-HHHHhcc-----------------------ccEEEecCCCCCCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQD-LVTALKR-----------------------GQNARCSASKHETP 56 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~-~~~~v~~-----------------------G~~v~~G~~~~~~~ 56 (129)
+|++|++++ +++++++++ ++|+++++|+++ .+ +.+.+.. |+++.+|.......
T Consensus 176 ~Ga~vi~~~-~~~~~~~~~-~lGa~~~i~~~~-~~~~~~~~~g~D~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~~ 252 (321)
T 3tqh_A 176 KGTTVITTA-SKRNHAFLK-ALGAEQCINYHE-EDFLLAISTPVDAVIDLVGGDVGIQSIDCLKETGCIVSVPTITAGRV 252 (321)
T ss_dssp TTCEEEEEE-CHHHHHHHH-HHTCSEEEETTT-SCHHHHCCSCEEEEEESSCHHHHHHHGGGEEEEEEEEECCSTTHHHH
T ss_pred cCCEEEEEe-ccchHHHHH-HcCCCEEEeCCC-cchhhhhccCCCEEEECCCcHHHHHHHHhccCCCEEEEeCCCCchhh
Confidence 589999998 456688887 999999999987 66 6554432 88888765211000
Q ss_pred C-----CC-cceecc-cchHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEEe
Q 039636 57 R-----EN-CSMWND-LTYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDL 117 (129)
Q Consensus 57 ~-----~~-~l~~~~-~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~ 117 (129)
. .+ .+.... ....+.++++++++.+|.|++.+..+|+|+++++||+.+.+++..||+||++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 320 (321)
T 3tqh_A 253 IEVAKQKHRRAFGLLKQFNIEELHYLGKLVSEDKLRIEISRIFQLSEAVTAHELLETGHVRGKLVFKV 320 (321)
T ss_dssp HHHHHHTTCEEECCCCCCCHHHHHHHHHHHHTTSSCCCEEEEECGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred hhhhhhcceEEEEEecCCCHHHHHHHHHHHHCCCcccccccEEcHHHHHHHHHHHHcCCCCceEEEEe
Confidence 0 01 111100 1346778999999999999998888899999999999999999999999986
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=99.47 E-value=3.6e-13 Score=101.04 Aligned_cols=117 Identities=14% Similarity=0.106 Sum_probs=86.5
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccH-----------------HHHhcc---------------------
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDL-----------------VTALKR--------------------- 42 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~-----------------~~~v~~--------------------- 42 (129)
+|++||+++++++|+++++ ++|+++++|+.+ .++ .+.+++
T Consensus 252 ~Ga~vi~~~~~~~~~~~~~-~lGa~~vi~~~~-~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~~~~~~ 329 (456)
T 3krt_A 252 GGANPICVVSSPQKAEICR-AMGAEAIIDRNA-EGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGA 329 (456)
T ss_dssp TTCEEEEEESSHHHHHHHH-HHTCCEEEETTT-TTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCHHHHHH
T ss_pred cCCeEEEEECCHHHHHHHH-hhCCcEEEecCc-CcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCchhHHH
Confidence 5899999999999999998 999999999876 332 244432
Q ss_pred --------ccEEEecCCCCCCCCCC---------cceecccchHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHH
Q 039636 43 --------GQNARCSASKHETPREN---------CSMWNDLTYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLF 105 (129)
Q Consensus 43 --------G~~v~~G~~~~~~~~~~---------~l~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~ 105 (129)
|+++.+|.........+ .+..........+.++++++.+|.|++.+..+|+|+++++|++.+.
T Consensus 330 ~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~eA~~~l~ 409 (456)
T 3krt_A 330 SVFVTRKGGTITTCASTSGYMHEYDNRYLWMSLKRIIGSHFANYREAWEANRLIAKGRIHPTLSKVYSLEDTGQAAYDVH 409 (456)
T ss_dssp HHHHEEEEEEEEESCCTTCSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHH
T ss_pred HHHHhhCCcEEEEEecCCCcccccCHHHHHhcCeEEEEeccCCHHHHHHHHHHHHcCCcccceeEEEcHHHHHHHHHHHH
Confidence 78888876322111100 1111111233445679999999999998887899999999999999
Q ss_pred cCCccceEEEEeCC
Q 039636 106 SGRNVGKQALDLDS 119 (129)
Q Consensus 106 ~~~~~Gkvvv~~~~ 119 (129)
+++..||+||.+.+
T Consensus 410 ~~~~~GKvvv~~~~ 423 (456)
T 3krt_A 410 RNLHQGKVGVLCLA 423 (456)
T ss_dssp TTCSSSEEEEESSC
T ss_pred hCCCCCcEEEEeCC
Confidence 99999999999854
|
| >3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A | Back alignment and structure |
|---|
Probab=99.46 E-value=4.4e-13 Score=97.40 Aligned_cols=116 Identities=12% Similarity=0.096 Sum_probs=86.4
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc------------------------------ccEEEec
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------------------GQNARCS 49 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~------------------------------G~~v~~G 49 (129)
+|+ +|++++++++|+++++ ++|+++++|+++ .++.+.+++ |+++.+|
T Consensus 189 ~Ga~~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~-~~~~~~v~~~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 189 LGAGRIFAVGSRKHCCDIAL-EYGATDIINYKN-GDIVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp TTCSSEEEECCCHHHHHHHH-HHTCCEEECGGG-SCHHHHHHHHTTTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECC
T ss_pred cCCcEEEEECCCHHHHHHHH-HhCCceEEcCCC-cCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEec
Confidence 488 7999999999999998 999999999987 778777654 7888887
Q ss_pred CCCCCCC-C--CC--cceeccc--------chHHHHHHHHHHHHcCCceee--eeeecC-cccHHHHHHHHHcCCc-cce
Q 039636 50 ASKHETP-R--EN--CSMWNDL--------TYSKFLDVVLPLIREGKIVYV--EDIVEG-LENAPAALLGLFSGRN-VGK 112 (129)
Q Consensus 50 ~~~~~~~-~--~~--~l~~~~~--------~~~~~~~~~~~~~~~g~i~~~--~~~~~~-l~~~~~a~~~~~~~~~-~Gk 112 (129)
....... . .. .+..+.. ...+.++++++++.+|.+++. +..+|+ |+++++||+.+.+++. .||
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~~~~K 346 (352)
T 3fpc_A 267 YLGEGDNIDIPRSEWGVGMGHKHIHGGLCPGGRLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIK 346 (352)
T ss_dssp CCCSCSEEEEETTTTGGGTBCEEEEEBCCCCHHHHHHHHHHHHHTTSCCGGGGEEEEEESTTHHHHHHHHHHSCCTTCSE
T ss_pred ccCCCCceecchhHhhhhccccEEEEeeccCchhHHHHHHHHHHcCCCChhHhheeeCCCHHHHHHHHHHHHhCCCCcEE
Confidence 6322111 0 00 0001111 236678999999999999875 445688 9999999999998665 499
Q ss_pred EEEEeC
Q 039636 113 QALDLD 118 (129)
Q Consensus 113 vvv~~~ 118 (129)
+||+++
T Consensus 347 vvi~~~ 352 (352)
T 3fpc_A 347 PVVILA 352 (352)
T ss_dssp EEEECC
T ss_pred EEEEeC
Confidence 999874
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=2.4e-14 Score=102.90 Aligned_cols=115 Identities=13% Similarity=0.126 Sum_probs=84.3
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHH---------------------HHhcc----ccEEEecCCCCCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLV---------------------TALKR----GQNARCSASKHET 55 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~---------------------~~v~~----G~~v~~G~~~~~~ 55 (129)
+||+|++++++++|+++++ ++|+++++|+++ .+.. ..+.. |+++.+|......
T Consensus 170 ~Ga~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~-~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~ 247 (324)
T 3nx4_A 170 LGYQVAAVSGRESTHGYLK-SLGANRILSRDE-FAESRPLEKQLWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGGFA 247 (324)
T ss_dssp TTCCEEEEESCGGGHHHHH-HHTCSEEEEGGG-SSCCCSSCCCCEEEEEESSCHHHHHHHHHTEEEEEEEEECCCTTCSE
T ss_pred cCCEEEEEeCCHHHHHHHH-hcCCCEEEecCC-HHHHHhhcCCCccEEEECCCcHHHHHHHHHHhcCCEEEEEecCCCCC
Confidence 5899999999999999998 999999999865 3221 11110 8999988732211
Q ss_pred CC--CCcceeccc-------------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEEeC
Q 039636 56 PR--ENCSMWNDL-------------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDLD 118 (129)
Q Consensus 56 ~~--~~~l~~~~~-------------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~~ 118 (129)
.. ...++.++. ...+.++++++++.+|.+++. ..+|+|+++++||+.+.+++..||+||+++
T Consensus 248 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~-~~~~~l~~~~~A~~~~~~~~~~gkvvv~~~ 324 (324)
T 3nx4_A 248 LPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVKDLPESFYAQA-ATEITLADAPKFADAIINNQVQGRTLVKIK 324 (324)
T ss_dssp EEEESHHHHHHCCEEEECCSTTCCHHHHHHHHHHHHHHSCHHHHHHH-EEEEEGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred CCCCHHHHhhcCeEEEEEeccccChHHHHHHHHHHHHHHHcCCCCCC-ceeEeHHHHHHHHHHHHhCCCCceEEEecC
Confidence 11 001111111 234678999999999999987 667899999999999999999999999874
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=99.46 E-value=2.6e-13 Score=98.95 Aligned_cols=118 Identities=17% Similarity=0.004 Sum_probs=88.8
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcc-cHHHHhcc---------------------------ccEEEecCCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQ-DLVTALKR---------------------------GQNARCSASK 52 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~-~~~~~v~~---------------------------G~~v~~G~~~ 52 (129)
+|++|++++++++++++++ ++|+++++|+++ . ++.+.+.. |+++.+|...
T Consensus 202 ~Ga~Vi~~~~~~~~~~~~~-~lGa~~v~~~~~-~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~ 279 (360)
T 1piw_A 202 MGAETYVISRSSRKREDAM-KMGADHYIATLE-EGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPE 279 (360)
T ss_dssp HTCEEEEEESSSTTHHHHH-HHTCSEEEEGGG-TSCHHHHSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCC
T ss_pred CCCEEEEEcCCHHHHHHHH-HcCCCEEEcCcC-chHHHHHhhcCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCC
Confidence 3889999999999999998 899999999876 5 66554431 6777666522
Q ss_pred CC-CCCCCcceeccc-------chHHHHHHHHHHHHcCCceeeeeeecCccc--HHHHHHHHHcCCccceEEEEeCCCc
Q 039636 53 HE-TPRENCSMWNDL-------TYSKFLDVVLPLIREGKIVYVEDIVEGLEN--APAALLGLFSGRNVGKQALDLDSCL 121 (129)
Q Consensus 53 ~~-~~~~~~l~~~~~-------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~--~~~a~~~~~~~~~~Gkvvv~~~~~~ 121 (129)
.. ......++.++. ...+.++++++++.+|.|++.+ .+|+|++ +++||+.+.+++..||+||+++++.
T Consensus 280 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~i-~~~~l~~~~~~~A~~~~~~~~~~gKvvi~~~~~~ 357 (360)
T 1piw_A 280 QHEMLSLKPYGLKAVSISYSALGSIKELNQLLKLVSEKDIKIWV-ETLPVGEAGVHEAFERMEKGDVRYRFTLVGYDKE 357 (360)
T ss_dssp SSCCEEECGGGCBSCEEEECCCCCHHHHHHHHHHHHHTTCCCCE-EEEESSHHHHHHHHHHHHHTCCSSEEEEECCHHH
T ss_pred CccccCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHhCCCcceE-EEEeccHhHHHHHHHHHHCCCCceEEEEecCccc
Confidence 21 000112222222 3357789999999999999887 6789999 9999999999998999999987654
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=9.3e-13 Score=95.30 Aligned_cols=119 Identities=60% Similarity=0.954 Sum_probs=87.1
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc----------------------------ccEEEecCCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR----------------------------GQNARCSASK 52 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~----------------------------G~~v~~G~~~ 52 (129)
+|++|+++++++++++.+++++|+++++|+++..++.+.+.+ |+++.+|...
T Consensus 179 ~G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~G~~~ 258 (345)
T 2j3h_A 179 MGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVLVNMNMHGRIAVCGMIS 258 (345)
T ss_dssp TTCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEEEEEESSCHHHHHHHHTTEEEEEEEEECCCGG
T ss_pred CCCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEcccc
Confidence 489999999999999988646999999998752244444331 8898888622
Q ss_pred CC-----CCC--CCcceeccc------------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceE
Q 039636 53 HE-----TPR--ENCSMWNDL------------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQ 113 (129)
Q Consensus 53 ~~-----~~~--~~~l~~~~~------------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkv 113 (129)
.. ... ...++.++. ...+.++++++++.+|.|++.+..+++|+++++||+.+.+++..||+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gKv 338 (345)
T 2j3h_A 259 QYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQ 338 (345)
T ss_dssp GTTCSSCCCBSCTTHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCCEEEEESGGGSHHHHHHHHTTCCSSEE
T ss_pred ccccCCccccccHHHHhhhceeeceeeehhhhhhHHHHHHHHHHHHHCCCCcCcccccCCHHHHHHHHHHHHcCCCceEE
Confidence 10 100 111111111 23456899999999999998877778999999999999999999999
Q ss_pred EEEeCC
Q 039636 114 ALDLDS 119 (129)
Q Consensus 114 vv~~~~ 119 (129)
|+++++
T Consensus 339 vv~~~~ 344 (345)
T 2j3h_A 339 VVVVAR 344 (345)
T ss_dssp EEESSC
T ss_pred EEEeCC
Confidence 999864
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.3e-13 Score=100.09 Aligned_cols=114 Identities=16% Similarity=0.094 Sum_probs=84.1
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~ 51 (129)
+||+|++++++++++++++ ++|+++++|+++ +++.+.+++ |+++.+|..
T Consensus 188 ~Ga~Vi~~~~~~~~~~~~~-~~Ga~~~~~~~~-~~~~~~v~~~~~~~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~ 265 (349)
T 3pi7_A 188 EGFRPIVTVRRDEQIALLK-DIGAAHVLNEKA-PDFEATLREVMKAEQPRIFLDAVTGPLASAIFNAMPKRARWIIYGRL 265 (349)
T ss_dssp HTCEEEEEESCGGGHHHHH-HHTCSEEEETTS-TTHHHHHHHHHHHHCCCEEEESSCHHHHHHHHHHSCTTCEEEECCCS
T ss_pred CCCEEEEEeCCHHHHHHHH-HcCCCEEEECCc-HHHHHHHHHHhcCCCCcEEEECCCChhHHHHHhhhcCCCEEEEEecc
Confidence 3899999999999999998 999999999987 777776654 899988862
Q ss_pred CCCCC--CC-Ccceeccc----------------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccce
Q 039636 52 KHETP--RE-NCSMWNDL----------------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGK 112 (129)
Q Consensus 52 ~~~~~--~~-~~l~~~~~----------------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gk 112 (129)
..... .. ..++.++. ...+.++++++++.+|.|++.+..+|+|+++++||+. .+++..||
T Consensus 266 ~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~-~~~~~~gK 344 (349)
T 3pi7_A 266 DPDATVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAILEAQKRFSDGRWSTDVTAVVPLAEAIAWVPA-ELTKPNGK 344 (349)
T ss_dssp CCSCCCCSCTHHHHHSCCEEEECCHHHHHHHTHHHHHHHHHHC-CTTTTSSCCC-CCEEEEHHHHHHHHHH-HHTSSSSC
T ss_pred CCCCCCCCchhhhhccccEEEEEEehhhhhhCcHHHHHHHHHHHHHHHcCCcccccceEEcHHHHHHHHHH-HhCCCCce
Confidence 22111 11 11222211 1256788899999999999988888999999999995 45567799
Q ss_pred EEEEe
Q 039636 113 QALDL 117 (129)
Q Consensus 113 vvv~~ 117 (129)
+||++
T Consensus 345 vvl~p 349 (349)
T 3pi7_A 345 VFIRP 349 (349)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 99874
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.1e-12 Score=94.65 Aligned_cols=116 Identities=17% Similarity=0.185 Sum_probs=88.0
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~ 51 (129)
+|++|+++++++++.+.++ ++|+++++|+++ .++.+.+.+ |+++.+|..
T Consensus 169 ~G~~Vi~~~~~~~~~~~~~-~~g~~~~~d~~~-~~~~~~i~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~iv~~g~~ 246 (333)
T 1wly_A 169 LGATVIGTVSTEEKAETAR-KLGCHHTINYST-QDFAEVVREITGGKGVDVVYDSIGKDTLQKSLDCLRPRGMCAAYGHA 246 (333)
T ss_dssp TTCEEEEEESSHHHHHHHH-HHTCSEEEETTT-SCHHHHHHHHHTTCCEEEEEECSCTTTHHHHHHTEEEEEEEEECCCT
T ss_pred CCCEEEEEeCCHHHHHHHH-HcCCCEEEECCC-HHHHHHHHHHhCCCCCeEEEECCcHHHHHHHHHhhccCCEEEEEecC
Confidence 4899999999999999997 899999999887 666555432 888888763
Q ss_pred CCCCCC--CC-cceecc--c--------------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccce
Q 039636 52 KHETPR--EN-CSMWND--L--------------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGK 112 (129)
Q Consensus 52 ~~~~~~--~~-~l~~~~--~--------------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gk 112 (129)
...... .+ .++.++ . ...+.++++++++.+|.+++.+..+|||+++++||+.+.+++..||
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gK 326 (333)
T 1wly_A 247 SGVADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSKCLFDAVKAGVLHSSVAKTFPLREAAAAHKYMGGRQTIGS 326 (333)
T ss_dssp TCCCCCCCHHHHTTTTTSCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSCCCCEEEEEEGGGHHHHHHHHHHCSCCSE
T ss_pred CCCcCCCChhHhhhhcCCcEEEEEeehhhccCHHHHHHHHHHHHHHHHCCCcCCCcceEEeHHHHHHHHHHHHcCCCceE
Confidence 211110 01 122222 1 1135789999999999999988778999999999999999988999
Q ss_pred EEEEeC
Q 039636 113 QALDLD 118 (129)
Q Consensus 113 vvv~~~ 118 (129)
+|++++
T Consensus 327 vvi~~~ 332 (333)
T 1wly_A 327 IVLLPQ 332 (333)
T ss_dssp EEEETT
T ss_pred EEEEeC
Confidence 999875
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=1e-12 Score=95.27 Aligned_cols=114 Identities=19% Similarity=0.184 Sum_probs=86.0
Q ss_pred CcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc------------------------------ccEEEecCC
Q 039636 2 GCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------------------GQNARCSAS 51 (129)
Q Consensus 2 Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~------------------------------G~~v~~G~~ 51 (129)
|++|+++++++++++.++ ++|+++++|+.+ .++.+.+.+ |+++.+|..
T Consensus 196 Ga~Vi~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~ 273 (347)
T 1jvb_A 196 GATIIGVDVREEAVEAAK-RAGADYVINASM-QDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLF 273 (347)
T ss_dssp CCEEEEEESSHHHHHHHH-HHTCSEEEETTT-SCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSS
T ss_pred CCeEEEEcCCHHHHHHHH-HhCCCEEecCCC-ccHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCC
Confidence 899999999999999997 899999999887 565333221 788887763
Q ss_pred C-CCCCCCCcceeccc-------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEEe
Q 039636 52 K-HETPRENCSMWNDL-------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDL 117 (129)
Q Consensus 52 ~-~~~~~~~~l~~~~~-------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~ 117 (129)
. ........++.++. ...+.++++++++.+|.+++.+..+|||+++++||+.+.+++..||+||++
T Consensus 274 ~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 347 (347)
T 1jvb_A 274 GADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP 347 (347)
T ss_dssp CCCCCCCHHHHHHHTCEEEECCSCCHHHHHHHHHHHHTTSSCCCCEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred CCCCCCCHHHHHhCceEEEEEeccCHHHHHHHHHHHHcCCCCceEEEEEcHHHHHHHHHHHHCCCCcceEEecC
Confidence 2 11111011222221 346778999999999999988877799999999999999999899999874
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=8.2e-13 Score=96.47 Aligned_cols=117 Identities=26% Similarity=0.365 Sum_probs=87.4
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc----------------------------ccEEEecCCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR----------------------------GQNARCSASK 52 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~----------------------------G~~v~~G~~~ 52 (129)
+|++|++++++++++++++ ++|+++++|+++ +++.+.+++ |+++.+|...
T Consensus 187 ~Ga~Vi~~~~~~~~~~~~~-~~Ga~~~~~~~~-~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~g~~~ 264 (362)
T 2c0c_A 187 AKCHVIGTCSSDEKSAFLK-SLGCDRPINYKT-EPVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFIS 264 (362)
T ss_dssp TTCEEEEEESSHHHHHHHH-HTTCSEEEETTT-SCHHHHHHHHCTTCEEEEEECSCTHHHHHHHHHEEEEEEEEECCCGG
T ss_pred CCCEEEEEECCHHHHHHHH-HcCCcEEEecCC-hhHHHHHHHhcCCCCCEEEECCCHHHHHHHHHHHhcCCEEEEEeCCC
Confidence 4899999999999999998 899999999887 666655542 8888888621
Q ss_pred CCC------C----C-CCcceeccc------------chHHHHHHHHHHHHcCCceeeee--------eecCcccHHHHH
Q 039636 53 HET------P----R-ENCSMWNDL------------TYSKFLDVVLPLIREGKIVYVED--------IVEGLENAPAAL 101 (129)
Q Consensus 53 ~~~------~----~-~~~l~~~~~------------~~~~~~~~~~~~~~~g~i~~~~~--------~~~~l~~~~~a~ 101 (129)
... . . ...++.++. ...+.++++++++.+|.+++.+. ..++|+++++||
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~l~~~~~A~ 344 (362)
T 2c0c_A 265 GYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAV 344 (362)
T ss_dssp GTTSSSCCCCCCCTTHHHHHHHHTCEEEECCGGGCGGGHHHHHHHHHHHHHTTCSCCCEECSTTSTTCSCBSTTHHHHHH
T ss_pred CcCcccccccccccccHHHHHhhcceEEEEEhhhhhhhHHHHHHHHHHHHHCCCeEeeeccccccccccccCHHHHHHHH
Confidence 100 0 0 001111111 13567899999999999998765 346999999999
Q ss_pred HHHHcCCccceEEEEeCC
Q 039636 102 LGLFSGRNVGKQALDLDS 119 (129)
Q Consensus 102 ~~~~~~~~~Gkvvv~~~~ 119 (129)
+.+.+++..||+||++.+
T Consensus 345 ~~~~~~~~~gKvvv~~~~ 362 (362)
T 2c0c_A 345 NYMYMGKNTGKIVVELPH 362 (362)
T ss_dssp HHHHTTCCSBEEEEECCC
T ss_pred HHHHcCCCCceEEEEcCC
Confidence 999999889999998753
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A | Back alignment and structure |
|---|
Probab=99.43 E-value=6.1e-13 Score=96.83 Aligned_cols=118 Identities=17% Similarity=0.122 Sum_probs=85.1
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCC---CcccHHHHhcc-----------------------------ccEEE
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYK---EEQDLVTALKR-----------------------------GQNAR 47 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~---~~~~~~~~v~~-----------------------------G~~v~ 47 (129)
+|+ +|++++++++|+++++ ++|+++++|++ . .++.+.+++ |+++.
T Consensus 194 ~Ga~~Vi~~~~~~~~~~~a~-~lGa~~vi~~~~~~~-~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~ 271 (356)
T 1pl8_A 194 MGAAQVVVTDLSATRLSKAK-EIGADLVLQISKESP-QEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVL 271 (356)
T ss_dssp TTCSEEEEEESCHHHHHHHH-HTTCSEEEECSSCCH-HHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEE
T ss_pred cCCCEEEEECCCHHHHHHHH-HhCCCEEEcCccccc-chHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhcCCCEEEE
Confidence 488 9999999999999998 99999999987 3 345444432 88888
Q ss_pred ecCCCCCC-CCCCcceeccc------chHHHHHHHHHHHHcCCce--eeeeeecCcccHHHHHHHHHcCCccceEEEEeC
Q 039636 48 CSASKHET-PRENCSMWNDL------TYSKFLDVVLPLIREGKIV--YVEDIVEGLENAPAALLGLFSGRNVGKQALDLD 118 (129)
Q Consensus 48 ~G~~~~~~-~~~~~l~~~~~------~~~~~~~~~~~~~~~g~i~--~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~~ 118 (129)
+|...... .....++.++. .....++++++++.+|.++ +.+..+|||+++++||+.+.++ ..||+||+++
T Consensus 272 ~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~-~~gKvvi~~~ 350 (356)
T 1pl8_A 272 VGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKG-LGLKIMLKCD 350 (356)
T ss_dssp CSCCCSCCCCCHHHHHHTTCEEEECCSCSSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHTT-CCSEEEEECC
T ss_pred EecCCCCCccCHHHHHhcceEEEEecccHHHHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHhCC-CceEEEEeCC
Confidence 87622111 11001222211 1234578999999999975 4555668999999999999988 8899999997
Q ss_pred CCc
Q 039636 119 SCL 121 (129)
Q Consensus 119 ~~~ 121 (129)
+++
T Consensus 351 ~~~ 353 (356)
T 1pl8_A 351 PSD 353 (356)
T ss_dssp TTC
T ss_pred CCC
Confidence 654
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=2.7e-12 Score=93.39 Aligned_cols=119 Identities=28% Similarity=0.500 Sum_probs=89.7
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc----------------------------ccEEEecCC
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR----------------------------GQNARCSAS 51 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~----------------------------G~~v~~G~~ 51 (129)
+|+ +|+++++++++++.+++++|+++++|+++ .++.+.+.+ |+++.+|..
T Consensus 184 ~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~-~~~~~~~~~~~~~~~d~vi~~~G~~~~~~~~~~l~~~G~iv~~G~~ 262 (357)
T 2zb4_A 184 LGCSRVVGICGTHEKCILLTSELGFDAAINYKK-DNVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHIILCGQI 262 (357)
T ss_dssp TTCSEEEEEESCHHHHHHHHHTSCCSEEEETTT-SCHHHHHHHHCTTCEEEEEESCCHHHHHHHHHTEEEEEEEEECCCG
T ss_pred CCCCeEEEEeCCHHHHHHHHHHcCCceEEecCc-hHHHHHHHHhcCCCCCEEEECCCHHHHHHHHHHhccCcEEEEECCc
Confidence 488 99999999999998873499999999887 666655442 889888862
Q ss_pred CC---CCCCC--------Ccceeccc------------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCC
Q 039636 52 KH---ETPRE--------NCSMWNDL------------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGR 108 (129)
Q Consensus 52 ~~---~~~~~--------~~l~~~~~------------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~ 108 (129)
.. ..+.. +.++.++. ...+.++++++++.+|.+++.+..+|+|+++++||+.+.+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~ 342 (357)
T 2zb4_A 263 SQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGG 342 (357)
T ss_dssp GGTTSCCCSSCCCCHHHHHHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTCCCCCEEEEECGGGHHHHHHHHHTTC
T ss_pred cccccCccccccchhhhhhhhhcceeEEEEeehhhhhHHHHHHHHHHHHHHHcCCCcCccceecCHHHHHHHHHHHHcCC
Confidence 11 11100 11111111 126778999999999999998877899999999999999998
Q ss_pred ccceEEEEeCCC
Q 039636 109 NVGKQALDLDSC 120 (129)
Q Consensus 109 ~~Gkvvv~~~~~ 120 (129)
..||+||+++++
T Consensus 343 ~~gKvvi~~~~~ 354 (357)
T 2zb4_A 343 NIGKQIVCISEE 354 (357)
T ss_dssp CSBEEEEECCCC
T ss_pred CCceEEEEEecc
Confidence 899999998654
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=99.43 E-value=3.2e-13 Score=97.87 Aligned_cols=114 Identities=21% Similarity=0.165 Sum_probs=68.8
Q ss_pred CcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc---------------------------ccEEEecCCCCC
Q 039636 2 GCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR---------------------------GQNARCSASKHE 54 (129)
Q Consensus 2 Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~---------------------------G~~v~~G~~~~~ 54 (129)
|++|++++++++++++++ ++|+++++|+++.+++.+.+.. |+++.+|.....
T Consensus 196 Ga~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~ 274 (344)
T 2h6e_A 196 NITIVGISRSKKHRDFAL-ELGADYVSEMKDAESLINKLTDGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKR 274 (344)
T ss_dssp TCEEEEECSCHHHHHHHH-HHTCSEEECHHHHHHHHHHHHTTCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSC
T ss_pred CCEEEEEeCCHHHHHHHH-HhCCCEEeccccchHHHHHhhcCCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCCC
Confidence 899999999999999998 8999999987530123333321 888888863221
Q ss_pred CCCC-Ccceeccc-------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEEe
Q 039636 55 TPRE-NCSMWNDL-------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDL 117 (129)
Q Consensus 55 ~~~~-~~l~~~~~-------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~ 117 (129)
.... ..++.++. ...+.++++++++.+|.+++.+ .+|+|+++++||+.+.+++..||+||++
T Consensus 275 ~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 344 (344)
T 2h6e_A 275 VSLEAFDTAVWNKKLLGSNYGSLNDLEDVVRLSESGKIKPYI-IKVPLDDINKAFTNLDEGRVDGRQVITP 344 (344)
T ss_dssp CCCCHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSSCCCE-EEECC----------------CEEEECC
T ss_pred cccCHHHHhhCCcEEEEEecCCHHHHHHHHHHHHcCCCCcce-EEEeHHHHHHHHHHHHcCCCceEEEEeC
Confidence 1111 11222221 3467789999999999999988 7799999999999999988899999863
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=99.42 E-value=5.6e-13 Score=97.88 Aligned_cols=115 Identities=14% Similarity=0.102 Sum_probs=88.4
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCC---CcccHHHHhcc------------------------------ccEE
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYK---EEQDLVTALKR------------------------------GQNA 46 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~---~~~~~~~~v~~------------------------------G~~v 46 (129)
+|| +|++++++++++++++ ++|+++++|++ + .++.+.+++ |+++
T Consensus 218 ~Ga~~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~~~-~~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv 295 (380)
T 1vj0_A 218 LGAENVIVIAGSPNRLKLAE-EIGADLTLNRRETSV-EERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYS 295 (380)
T ss_dssp TTBSEEEEEESCHHHHHHHH-HTTCSEEEETTTSCH-HHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEE
T ss_pred cCCceEEEEcCCHHHHHHHH-HcCCcEEEeccccCc-chHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcCCEEE
Confidence 474 9999999999999998 99999999987 5 566665543 8888
Q ss_pred EecCCC-CCCCCCC--c-ceeccc-------chHHHHHHHHHHHHc--CCceeeeeeecCcccHHHHHHHHHcCCccceE
Q 039636 47 RCSASK-HETPREN--C-SMWNDL-------TYSKFLDVVLPLIRE--GKIVYVEDIVEGLENAPAALLGLFSGRNVGKQ 113 (129)
Q Consensus 47 ~~G~~~-~~~~~~~--~-l~~~~~-------~~~~~~~~~~~~~~~--g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkv 113 (129)
.+|... ......+ . ++.++. ...+.++++++++.+ |.|++.+..+|+|+++++||+.+.+++.. |+
T Consensus 296 ~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~-Kv 374 (380)
T 1vj0_A 296 VAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSRNYQLLSKLITHRLPLKEANKALELMESREAL-KV 374 (380)
T ss_dssp ECCCCSCCCCEEECHHHHTTTTTCEEEECCCCCHHHHHHHHHHHHTCHHHHGGGCCEEEEGGGHHHHHHHHHHTSCS-CE
T ss_pred EEecCCCCCCeeEchHHHHHhCCeEEEEeecCCHHHHHHHHHHHHhhcCCeeeEEEEEEeHHHHHHHHHHHhcCCCc-eE
Confidence 887633 2111111 2 333332 346788999999999 99988877779999999999999998888 99
Q ss_pred EEEeC
Q 039636 114 ALDLD 118 (129)
Q Consensus 114 vv~~~ 118 (129)
||+++
T Consensus 375 vl~~~ 379 (380)
T 1vj0_A 375 ILYPE 379 (380)
T ss_dssp EEECC
T ss_pred EEEeC
Confidence 99864
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=2.7e-12 Score=93.96 Aligned_cols=118 Identities=14% Similarity=0.223 Sum_probs=84.8
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc------------------------------ccEEEecC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------------------GQNARCSA 50 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~------------------------------G~~v~~G~ 50 (129)
+|++||+++ +++|+++++ ++|+++++|+++ +++.+.+++ |+++.+|.
T Consensus 188 ~Ga~Vi~~~-~~~~~~~~~-~lGa~~vi~~~~-~~~~~~v~~~t~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~iv~~g~ 264 (371)
T 3gqv_A 188 SGYIPIATC-SPHNFDLAK-SRGAEEVFDYRA-PNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLNP 264 (371)
T ss_dssp TTCEEEEEE-CGGGHHHHH-HTTCSEEEETTS-TTHHHHHHHHTTTCCCEEEESSCSHHHHHHHHHHSCTTCEEEEESSC
T ss_pred CCCEEEEEe-CHHHHHHHH-HcCCcEEEECCC-chHHHHHHHHccCCccEEEECCCchHHHHHHHHHhhcCCCEEEEEec
Confidence 589999997 788999998 999999999987 777766554 78888875
Q ss_pred CCCC-----CCC---C--Ccceeccc----------------chHHHHHHHHHHHHcCCceeeeeee--cCcccHHHHHH
Q 039636 51 SKHE-----TPR---E--NCSMWNDL----------------TYSKFLDVVLPLIREGKIVYVEDIV--EGLENAPAALL 102 (129)
Q Consensus 51 ~~~~-----~~~---~--~~l~~~~~----------------~~~~~~~~~~~~~~~g~i~~~~~~~--~~l~~~~~a~~ 102 (129)
.... ... . ..++.++. ...+.++++++++.+|.|++.+..+ ++|+++++||+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~l~~~~~A~~ 344 (371)
T 3gqv_A 265 FPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGME 344 (371)
T ss_dssp CCC---CCSCEEEEECCGGGGGTSCBSCSTTTCBCCCHHHHHHHHHHHHHHHHHHHTTSSCCCCEEEEEECHHHHHHHHH
T ss_pred CccccccccccceeeeeeeeeccccccccccccccccHHHHHHHHHHHHHHHHHHHCCeeeCCcCeecCCcHHHHHHHHH
Confidence 2210 000 0 01221111 1234556889999999999987665 79999999999
Q ss_pred HHHcCCccc-eEEEEeCCCc
Q 039636 103 GLFSGRNVG-KQALDLDSCL 121 (129)
Q Consensus 103 ~~~~~~~~G-kvvv~~~~~~ 121 (129)
.+.+++..| |+|+++.+..
T Consensus 345 ~l~~g~~~Gkkvvv~~~~~~ 364 (371)
T 3gqv_A 345 LVRKGELSGEKLVVRLEGPL 364 (371)
T ss_dssp HHHTTCCSSCEEEEEECCC-
T ss_pred HHHcCCCceEEEEEEeCCcc
Confidence 999999988 6677776543
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=99.41 E-value=2.3e-12 Score=92.62 Aligned_cols=115 Identities=23% Similarity=0.208 Sum_probs=87.1
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~ 51 (129)
+|++|+++++++++++.++ ++|+++++|+++ +++.+.+.+ |+++.+|..
T Consensus 164 ~G~~V~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~l~~~G~iv~~g~~ 241 (327)
T 1qor_A 164 LGAKLIGTVGTAQKAQSAL-KAGAWQVINYRE-EDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNS 241 (327)
T ss_dssp HTCEEEEEESSHHHHHHHH-HHTCSEEEETTT-SCHHHHHHHHTTTCCEEEEEECSCGGGHHHHHHTEEEEEEEEECCCT
T ss_pred cCCEEEEEeCCHHHHHHHH-HcCCCEEEECCC-ccHHHHHHHHhCCCCceEEEECCchHHHHHHHHHhcCCCEEEEEecC
Confidence 3889999999999999998 899999999887 666655432 888888863
Q ss_pred CCCCCC--CCcceec-cc---------------chHHHHHHHHHHHHcCCceeeee--eecCcccHHHHHHHHHcCCccc
Q 039636 52 KHETPR--ENCSMWN-DL---------------TYSKFLDVVLPLIREGKIVYVED--IVEGLENAPAALLGLFSGRNVG 111 (129)
Q Consensus 52 ~~~~~~--~~~l~~~-~~---------------~~~~~~~~~~~~~~~g~i~~~~~--~~~~l~~~~~a~~~~~~~~~~G 111 (129)
...... .+.++.+ .. ...+.++++++++.+|.|++.+. .+|+|+++++||+.+.+++..|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~~l~~~~~A~~~~~~~~~~g 321 (327)
T 1qor_A 242 SGAVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKYPLKDAQRAHEILESRATQG 321 (327)
T ss_dssp TCCCCCBCTHHHHHTTSCEEECCCHHHHCCSHHHHHHHHHHHHHHHHTTSSCCCCCGGGEEEGGGHHHHHHHHHTTCCCB
T ss_pred CCCCCccCHHHHhhccceEEEccchhhhcCCHHHHHHHHHHHHHHHHCCCcccccccCcEEcHHHHHHHHHHHHhCCCCc
Confidence 221111 1112111 11 13567899999999999999887 7799999999999999998899
Q ss_pred eEEEEe
Q 039636 112 KQALDL 117 (129)
Q Consensus 112 kvvv~~ 117 (129)
|+|+++
T Consensus 322 Kvvl~~ 327 (327)
T 1qor_A 322 SSLLIP 327 (327)
T ss_dssp CCEEEC
T ss_pred eEEEeC
Confidence 999863
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=1.3e-12 Score=94.82 Aligned_cols=114 Identities=20% Similarity=0.120 Sum_probs=84.8
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc------------------------------ccEEEec
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------------------GQNARCS 49 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~------------------------------G~~v~~G 49 (129)
+|+ +|++++++++++++++ ++|+++++|+++ +++.+.+++ |+++.+|
T Consensus 190 ~Ga~~Vi~~~~~~~~~~~~~-~~Ga~~~~~~~~-~~~~~~v~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 190 SGAYPVIVSEPSDFRRELAK-KVGADYVINPFE-EDVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp TTCCSEEEECSCHHHHHHHH-HHTCSEEECTTT-SCHHHHHHHHTTTSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECC
T ss_pred cCCCEEEEECCCHHHHHHHH-HhCCCEEECCCC-cCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEc
Confidence 488 8999999999999998 999999999987 677666542 8888887
Q ss_pred CCCCCC-CCC-Ccceeccc-------ch-HHHHHHHHHHHHcCCc--eeeeeeecC-cccHHHHHHHHHcCCccceEEEE
Q 039636 50 ASKHET-PRE-NCSMWNDL-------TY-SKFLDVVLPLIREGKI--VYVEDIVEG-LENAPAALLGLFSGRNVGKQALD 116 (129)
Q Consensus 50 ~~~~~~-~~~-~~l~~~~~-------~~-~~~~~~~~~~~~~g~i--~~~~~~~~~-l~~~~~a~~~~~~~~~~Gkvvv~ 116 (129)
...... ... ..++.++. .. .+.++++++++.+|.+ ++.+..+|| |+++++||+.+.+ +..||+||+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~-~~~gKvvi~ 346 (348)
T 2d8a_A 268 LYPGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELMRA-GKTGKVVFM 346 (348)
T ss_dssp CCSSCCCCCHHHHTTTTTCEEEECCCCCSHHHHHHHHHHHHHTCCCCTTTEEEEEESSTTHHHHHHHHHT-TCCSEEEEE
T ss_pred cCCCCcccCchHHHHhCCcEEEEecCCCcHHHHHHHHHHHHcCCCChHHhheeeCCCHHHHHHHHHHHhC-CCceEEEEe
Confidence 622211 111 11222221 22 6778999999999996 455556689 9999999999977 678999998
Q ss_pred e
Q 039636 117 L 117 (129)
Q Consensus 117 ~ 117 (129)
+
T Consensus 347 ~ 347 (348)
T 2d8a_A 347 L 347 (348)
T ss_dssp C
T ss_pred e
Confidence 6
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=99.41 E-value=7e-13 Score=99.16 Aligned_cols=117 Identities=19% Similarity=0.116 Sum_probs=85.2
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccH------------------HHHhcc--------------------
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDL------------------VTALKR-------------------- 42 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~------------------~~~v~~-------------------- 42 (129)
+||+|++++.+++|+++++ ++|+++++|+.+ .++ .+.+++
T Consensus 244 ~Ga~vi~~~~~~~~~~~~~-~lGa~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~~~~~~ 321 (447)
T 4a0s_A 244 GGGIPVAVVSSAQKEAAVR-ALGCDLVINRAE-LGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVTFGL 321 (447)
T ss_dssp TTCEEEEEESSHHHHHHHH-HTTCCCEEEHHH-HTCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCHHHHHH
T ss_pred cCCEEEEEeCCHHHHHHHH-hcCCCEEEeccc-ccccccccccccccchhhhHHHHHHHHHhCCCceEEEECCCchHHHH
Confidence 5899999999999999997 999999998654 221 233322
Q ss_pred --------ccEEEecCCCCCCCCCC--cceecc-------cchHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHH
Q 039636 43 --------GQNARCSASKHETPREN--CSMWND-------LTYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLF 105 (129)
Q Consensus 43 --------G~~v~~G~~~~~~~~~~--~l~~~~-------~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~ 105 (129)
|+++.+|.........+ .++.+. ....+.+.++++++.+|.|++.+..+|+|+++++||+.+.
T Consensus 322 ~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~ 401 (447)
T 4a0s_A 322 SVIVARRGGTVVTCGSSSGYLHTFDNRYLWMKLKKIVGSHGANHEEQQATNRLFESGAVVPAMSAVYPLAEAAEACRVVQ 401 (447)
T ss_dssp HHHHSCTTCEEEESCCTTCSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHH
T ss_pred HHHHHhcCCEEEEEecCCCcccccCHHHHHhCCCEEEecCCCCHHHHHHHHHHHHcCCcccceeEEEcHHHHHHHHHHHh
Confidence 88888876322111100 111111 1334556789999999999998887899999999999999
Q ss_pred cCCccceEEEEeCC
Q 039636 106 SGRNVGKQALDLDS 119 (129)
Q Consensus 106 ~~~~~Gkvvv~~~~ 119 (129)
+++..||+||.+.+
T Consensus 402 ~~~~~GKvvv~~~~ 415 (447)
T 4a0s_A 402 TSRQVGKVAVLCMA 415 (447)
T ss_dssp TTCCSSEEEEESSC
T ss_pred cCCCceEEEEEeCC
Confidence 99999999999854
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=1.4e-12 Score=95.07 Aligned_cols=117 Identities=16% Similarity=0.102 Sum_probs=85.1
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-------------------------ccEEEecCCCCCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-------------------------GQNARCSASKHET 55 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-------------------------G~~v~~G~~~~~~ 55 (129)
+|++|+++++++++++.+++++|+++++|+++ .+....+.. |+++.+|......
T Consensus 203 ~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~-~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~ 281 (357)
T 2cf5_A 203 MGHHVTVISSSNKKREEALQDLGADDYVIGSD-QAKMSELADSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPL 281 (357)
T ss_dssp HTCEEEEEESSTTHHHHHHTTSCCSCEEETTC-HHHHHHSTTTEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSSCC
T ss_pred CCCeEEEEeCChHHHHHHHHHcCCceeecccc-HHHHHHhcCCCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCCCc
Confidence 38999999999999888765899999999876 433222211 7888887622111
Q ss_pred C-CCCcceeccc-------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEEeCC
Q 039636 56 P-RENCSMWNDL-------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDLDS 119 (129)
Q Consensus 56 ~-~~~~l~~~~~-------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~~~ 119 (129)
. ....++.++. ...+.++++++++.+|.+++.+. +|||+++++||+.+.+++..||+||++.+
T Consensus 282 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~~-~~~l~~~~~A~~~~~~~~~~gKvvi~~~~ 352 (357)
T 2cf5_A 282 QFLTPLLMLGRKVITGSFIGSMKETEEMLEFCKEKGLSSIIE-VVKMDYVNTAFERLEKNDVRYRFVVDVEG 352 (357)
T ss_dssp CCCHHHHHHHTCEEEECCSCCHHHHHHHHHHHHHTTCCCCEE-EEEGGGHHHHHHHHHTTCSSSEEEEETTS
T ss_pred cccCHHHHhCccEEEEEccCCHHHHHHHHHHHHcCCCCCceE-EEeHHHHHHHHHHHHCCCCceEEEEeCCc
Confidence 1 1001222221 23567899999999999998764 68999999999999999999999999864
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=99.40 E-value=2.5e-12 Score=93.60 Aligned_cols=115 Identities=17% Similarity=0.199 Sum_probs=84.0
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~ 51 (129)
+|++|+++++++++++.++ ++|+++++|+++ +++.+.+.+ |+++.+|..
T Consensus 194 ~Ga~Vi~~~~~~~~~~~~~-~~ga~~~~d~~~-~~~~~~~~~~~~~~~~D~vi~~~G~~~~~~~~~~l~~~G~iv~~g~~ 271 (351)
T 1yb5_A 194 YGLKILGTAGTEEGQKIVL-QNGAHEVFNHRE-VNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSR 271 (351)
T ss_dssp TTCEEEEEESSHHHHHHHH-HTTCSEEEETTS-TTHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHEEEEEEEEECCCC
T ss_pred CCCEEEEEeCChhHHHHHH-HcCCCEEEeCCC-chHHHHHHHHcCCCCcEEEEECCChHHHHHHHHhccCCCEEEEEecC
Confidence 4899999999999999887 999999999887 666655543 888888752
Q ss_pred CCCCCC------CC-cceecc-----c-chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHH-HHcCCccceEEEEe
Q 039636 52 KHETPR------EN-CSMWND-----L-TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLG-LFSGRNVGKQALDL 117 (129)
Q Consensus 52 ~~~~~~------~~-~l~~~~-----~-~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~-~~~~~~~Gkvvv~~ 117 (129)
...... ++ .+.... . .+.+.++.+.+++.+|.+++.+..+|||+++++|++. +..++..||+||++
T Consensus 272 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~~gKvvi~~ 351 (351)
T 1yb5_A 272 GTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL 351 (351)
T ss_dssp SCEEECTHHHHTTTCEEEECCGGGCCHHHHHHHHHHHHHHHHHTCCCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred CCCccCHHHHHhCCcEEEEEEeecCCHHHHHHHHHHHHHHHHCCCccCccceEEcHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 110000 11 111110 0 3455566777888999999988878999999999998 56677889999864
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=1.5e-12 Score=95.19 Aligned_cols=118 Identities=14% Similarity=0.057 Sum_probs=85.2
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-------------------------ccEEEecCCCCCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-------------------------GQNARCSASKHET 55 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-------------------------G~~v~~G~~~~~~ 55 (129)
+|++|+++++++++++.+++++|+++++|+++ .+....+.. |+++.+|......
T Consensus 210 ~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~-~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~ 288 (366)
T 1yqd_A 210 FGSKVTVISTSPSKKEEALKNFGADSFLVSRD-QEQMQAAAGTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPL 288 (366)
T ss_dssp TTCEEEEEESCGGGHHHHHHTSCCSEEEETTC-HHHHHHTTTCEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSSCE
T ss_pred CCCEEEEEeCCHHHHHHHHHhcCCceEEeccC-HHHHHHhhCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCCCC
Confidence 58999999999998888765899999999876 433322211 7787777522110
Q ss_pred -CCCCcceeccc-------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEEeCCC
Q 039636 56 -PRENCSMWNDL-------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDLDSC 120 (129)
Q Consensus 56 -~~~~~l~~~~~-------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~~~~ 120 (129)
.....++.++. ...+.+.++++++.+|.+++.+. +|||+++++||+.+.+++..||+|++++++
T Consensus 289 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~~-~~~l~~~~~A~~~~~~~~~~gKvvl~~~~~ 360 (366)
T 1yqd_A 289 ELPAFSLIAGRKIVAGSGIGGMKETQEMIDFAAKHNITADIE-VISTDYLNTAMERLAKNDVRYRFVIDVGNT 360 (366)
T ss_dssp EECHHHHHTTTCEEEECCSCCHHHHHHHHHHHHHTTCCCCEE-EECGGGHHHHHHHHHTTCCSSEEEECHHHH
T ss_pred CcCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCCCCceE-EEcHHHHHHHHHHHHcCCcceEEEEEcccc
Confidence 00001222221 23567899999999999998764 689999999999999999899999998653
|
| >1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=99.38 E-value=5e-12 Score=92.43 Aligned_cols=114 Identities=19% Similarity=0.250 Sum_probs=84.3
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecC
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSA 50 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~ 50 (129)
+|+ +|++++++++|+++++ ++|+++++|+++ +++.+.+++ |+++.+|.
T Consensus 213 ~Ga~~Vi~~~~~~~~~~~a~-~lGa~~vi~~~~-~~~~~~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 213 CGASIIIAVDIVESRLELAK-QLGATHVINSKT-QDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp HTCSEEEEEESCHHHHHHHH-HHTCSEEEETTT-SCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCC
T ss_pred cCCCeEEEECCCHHHHHHHH-HcCCCEEecCCc-cCHHHHHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCC
Confidence 378 7999999999999998 999999999987 677665543 88888886
Q ss_pred CCCC-CCCCC--cceeccc----------chHHHHHHHHHHHHcCCceee--eeeecCcccHHHHHHHHHcCCccceEEE
Q 039636 51 SKHE-TPREN--CSMWNDL----------TYSKFLDVVLPLIREGKIVYV--EDIVEGLENAPAALLGLFSGRNVGKQAL 115 (129)
Q Consensus 51 ~~~~-~~~~~--~l~~~~~----------~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~Gkvvv 115 (129)
.... ....+ .++.++. ...+.++++++++.+|.+++. +.. |||+++++||+.+.+++. +|+||
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~-~~l~~~~~A~~~~~~~~~-~Kvvv 368 (371)
T 1f8f_A 291 PQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSRKGIT-LKPII 368 (371)
T ss_dssp CSTTCCCCCCHHHHHHTTCEEEECSGGGSCHHHHHHHHHHHHHTTSCCGGGGEEE-EEGGGHHHHHHHHHHTSC-SEEEE
T ss_pred CCCCCccccCHHHHHhCCCEEEEeCCCCCchHHHHHHHHHHHHcCCCCcccceeE-ecHHHHHHHHHHHHCCCc-eEEEE
Confidence 3211 11111 1222211 124678999999999999864 445 899999999999998875 89999
Q ss_pred EeC
Q 039636 116 DLD 118 (129)
Q Consensus 116 ~~~ 118 (129)
+++
T Consensus 369 ~~~ 371 (371)
T 1f8f_A 369 KIA 371 (371)
T ss_dssp ECC
T ss_pred eeC
Confidence 863
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.38 E-value=4e-12 Score=92.17 Aligned_cols=116 Identities=19% Similarity=0.234 Sum_probs=85.5
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~ 51 (129)
+|++|+++++++++.+.++ ++|+++++|+.+.+++.+.+.+ |+++.+|..
T Consensus 193 ~Ga~V~~~~~~~~~~~~~~-~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~ 271 (347)
T 2hcy_A 193 MGYRVLGIDGGEGKEELFR-SIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMP 271 (347)
T ss_dssp TTCEEEEEECSTTHHHHHH-HTTCCEEEETTTCSCHHHHHHHHHTSCEEEEEECSSCHHHHHHHTTSEEEEEEEEECCCC
T ss_pred CCCcEEEEcCCHHHHHHHH-HcCCceEEecCccHhHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCC
Confidence 4899999999999999887 8999999998732455554432 788887763
Q ss_pred CCCCCC--CCcceeccc-------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEEeC
Q 039636 52 KHETPR--ENCSMWNDL-------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDLD 118 (129)
Q Consensus 52 ~~~~~~--~~~l~~~~~-------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~~ 118 (129)
...... ...++.++. ...+.++++++++.+|.+++.+. +|||+++++||+.+.+++..||+||+++
T Consensus 272 ~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~~-~~~l~~~~~A~~~~~~~~~~gKvvv~~~ 346 (347)
T 2hcy_A 272 AGAKCCSDVFNQVVKSISIVGSYVGNRADTREALDFFARGLVKSPIK-VVGLSTLPEIYEKMEKGQIVGRYVVDTS 346 (347)
T ss_dssp TTCEEEEEHHHHHHTTCEEEECCCCCHHHHHHHHHHHHTTSCCCCEE-EEEGGGHHHHHHHHHTTCCSSEEEEESC
T ss_pred CCCCCCCCHHHHhhCCcEEEEccCCCHHHHHHHHHHHHhCCCccceE-EEcHHHHHHHHHHHHcCCcceeEEEecC
Confidence 211111 001222221 34567899999999999998754 5899999999999999888999999875
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=2.1e-12 Score=93.97 Aligned_cols=116 Identities=21% Similarity=0.286 Sum_probs=84.5
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~ 51 (129)
+|++|+++++++++++.++ ++|+++++|+++ .++.+.+.+ |+++.+|..
T Consensus 186 ~Ga~Vi~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vi~~~G~~~~~~~~~~l~~~G~iv~~G~~ 263 (354)
T 2j8z_A 186 AGAIPLVTAGSQKKLQMAE-KLGAAAGFNYKK-EDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLM 263 (354)
T ss_dssp TTCEEEEEESCHHHHHHHH-HHTCSEEEETTT-SCHHHHHHHHTTTSCEEEEEESSCGGGHHHHHHHEEEEEEEEECCCT
T ss_pred cCCEEEEEeCCHHHHHHHH-HcCCcEEEecCC-hHHHHHHHHHhcCCCceEEEECCCchHHHHHHHhccCCCEEEEEecc
Confidence 4899999999999999997 999999999887 666655542 888888863
Q ss_pred CCCC--CCC-Ccceeccc--------c---------hHHHHHHHHHHHHcC---CceeeeeeecCcccHHHHHHHHHcCC
Q 039636 52 KHET--PRE-NCSMWNDL--------T---------YSKFLDVVLPLIREG---KIVYVEDIVEGLENAPAALLGLFSGR 108 (129)
Q Consensus 52 ~~~~--~~~-~~l~~~~~--------~---------~~~~~~~~~~~~~~g---~i~~~~~~~~~l~~~~~a~~~~~~~~ 108 (129)
.... ... ..++.++. . ..+.++++++++.+| .+++.+..+|||+++++||+.+.+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~~i~~~~~l~~~~~A~~~~~~~~ 343 (354)
T 2j8z_A 264 GGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYMEANK 343 (354)
T ss_dssp TCSCCCSCHHHHHHHTTCEEEECCSTTCCHHHHHHHHHHHHHHTGGGGTC---CCCCCCEEEEEEGGGHHHHHHHHHTTC
T ss_pred CCCccCCChhHHHHhCCCEEEEEEcccccccccHHHHHHHHHHHHHHHHcCCCccccCccceEEcHHHHHHHHHHHHhCC
Confidence 2211 111 11111111 0 112345688899999 89888887899999999999999988
Q ss_pred ccceEEEEeC
Q 039636 109 NVGKQALDLD 118 (129)
Q Consensus 109 ~~Gkvvv~~~ 118 (129)
..||+|+++.
T Consensus 344 ~~gKvvv~~~ 353 (354)
T 2j8z_A 344 NIGKIVLELP 353 (354)
T ss_dssp CSSEEEEECC
T ss_pred CCceEEEecC
Confidence 8999999874
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=1.5e-12 Score=95.30 Aligned_cols=116 Identities=13% Similarity=0.064 Sum_probs=83.3
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc--------------------------------ccEEE
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR--------------------------------GQNAR 47 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~--------------------------------G~~v~ 47 (129)
+|| +|++++++++|.++++ ++|+++++|+++ .++.+.+++ |+++.
T Consensus 205 ~Ga~~Vi~~~~~~~~~~~a~-~lGa~~vi~~~~-~~~~~~i~~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~vv~ 282 (370)
T 4ej6_A 205 AGATTVILSTRQATKRRLAE-EVGATATVDPSA-GDVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVI 282 (370)
T ss_dssp TTCSEEEEECSCHHHHHHHH-HHTCSEEECTTS-SCHHHHHHSTTSSSTTCEEEEEECSCCHHHHHHHHHHEEEEEEEEE
T ss_pred cCCCEEEEECCCHHHHHHHH-HcCCCEEECCCC-cCHHHHHHhhhhccCCCCCEEEECCCCHHHHHHHHHHhccCCEEEE
Confidence 588 8999999999999998 999999999987 677665432 88888
Q ss_pred ecCCCCC-CCCCC--cceeccc------chHHHHHHHHHHHHcCCcee--eeeeecCcccHHHHHHHHHcCC-ccceEEE
Q 039636 48 CSASKHE-TPREN--CSMWNDL------TYSKFLDVVLPLIREGKIVY--VEDIVEGLENAPAALLGLFSGR-NVGKQAL 115 (129)
Q Consensus 48 ~G~~~~~-~~~~~--~l~~~~~------~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~-~~Gkvvv 115 (129)
+|..... ....+ .++.++. .....++++++++.+|.+++ .+..+|||+++++||+.+.+++ ..+|+++
T Consensus 283 ~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~kvv~ 362 (370)
T 4ej6_A 283 LGVLPQGEKVEIEPFDILFRELRVLGSFINPFVHRRAADLVATGAIEIDRMISRRISLDEAPDVISNPAAAGEVKVLVIP 362 (370)
T ss_dssp CSCCCTTCCCCCCHHHHHHTTCEEEECCSCTTCHHHHHHHHHTTCSCCGGGEEEEECGGGHHHHHHSCCCTTCSEEEECC
T ss_pred EeccCCCCccccCHHHHHhCCcEEEEeccChHHHHHHHHHHHcCCCChhHcEEEEEEHHHHHHHHHHHHcCCCCeEEEEE
Confidence 8863221 11111 2222222 22345789999999999954 4566789999999999998876 5578888
Q ss_pred EeC
Q 039636 116 DLD 118 (129)
Q Consensus 116 ~~~ 118 (129)
++.
T Consensus 363 ~~~ 365 (370)
T 4ej6_A 363 SAE 365 (370)
T ss_dssp C--
T ss_pred ccc
Confidence 764
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.37 E-value=7.9e-13 Score=105.16 Aligned_cols=115 Identities=17% Similarity=0.191 Sum_probs=87.4
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~ 51 (129)
+||+||+|++++ |.+.+ .+|+++++|+++ .++.+.+++ |+++.+|..
T Consensus 369 ~Ga~V~~t~~~~-k~~~l--~lga~~v~~~~~-~~~~~~i~~~t~g~GvDvVld~~gg~~~~~~l~~l~~~Gr~v~iG~~ 444 (795)
T 3slk_A 369 LGAEVYATASED-KWQAV--ELSREHLASSRT-CDFEQQFLGATGGRGVDVVLNSLAGEFADASLRMLPRGGRFLELGKT 444 (795)
T ss_dssp TTCCEEEECCGG-GGGGS--CSCGGGEECSSS-STHHHHHHHHSCSSCCSEEEECCCTTTTHHHHTSCTTCEEEEECCST
T ss_pred cCCEEEEEeChH-Hhhhh--hcChhheeecCC-hhHHHHHHHHcCCCCeEEEEECCCcHHHHHHHHHhcCCCEEEEeccc
Confidence 589999999766 66655 499999999988 788877764 788888762
Q ss_pred CCCCCC------CC-ccee-----ccc-chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEEeC
Q 039636 52 KHETPR------EN-CSMW-----NDL-TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDLD 118 (129)
Q Consensus 52 ~~~~~~------~~-~l~~-----~~~-~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~~ 118 (129)
...... ++ .+.. ... ...+.++++++++.+|.|+|.+..+|||+++++||+.|.++++.||+||++.
T Consensus 445 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~l~~~g~l~p~~~~~~~l~~~~eA~~~l~~g~~~GKvVl~~~ 524 (795)
T 3slk_A 445 DVRDPVEVADAHPGVSYQAFDTVEAGPQRIGEMLHELVELFEGRVLEPLPVTAWDVRQAPEALRHLSQARHVGKLVLTMP 524 (795)
T ss_dssp TCCCHHHHHHHSSSEEEEECCGGGGHHHHHHHHHHHHHHHHHTTSCCCCCEEEEEGGGHHHHHHHHHHTCCCBEEEEECC
T ss_pred cccCcccccccCCCCEEEEeeccccCHHHHHHHHHHHHHHHHcCCcCCCcceeEcHHHHHHHHHHHhcCCccceEEEecC
Confidence 211100 11 1111 111 3467899999999999999988778999999999999999999999999986
Q ss_pred C
Q 039636 119 S 119 (129)
Q Consensus 119 ~ 119 (129)
+
T Consensus 525 ~ 525 (795)
T 3slk_A 525 P 525 (795)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.36 E-value=1.8e-12 Score=94.03 Aligned_cols=117 Identities=15% Similarity=0.050 Sum_probs=84.8
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCC---------------cc-cHHHHhcc----ccEEEecCCC-CCCC-CC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKE---------------EQ-DLVTALKR----GQNARCSASK-HETP-RE 58 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~---------------~~-~~~~~v~~----G~~v~~G~~~-~~~~-~~ 58 (129)
+|++|++++.+++|+++++ ++|+++++ +.. .. .+...+.. |+++.+|... .... ..
T Consensus 199 ~Ga~Vi~~~~~~~~~~~~~-~lGa~~v~-~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~ 276 (348)
T 3two_A 199 MGAEVSVFARNEHKKQDAL-SMGVKHFY-TDPKQCKEELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLS 276 (348)
T ss_dssp TTCEEEEECSSSTTHHHHH-HTTCSEEE-SSGGGCCSCEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGGGCCEEE
T ss_pred CCCeEEEEeCCHHHHHHHH-hcCCCeec-CCHHHHhcCCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCCcccCC
Confidence 5899999999999999998 99998876 221 01 22222222 9999998733 2111 11
Q ss_pred -Ccce-eccc-------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEEeCCC
Q 039636 59 -NCSM-WNDL-------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDLDSC 120 (129)
Q Consensus 59 -~~l~-~~~~-------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~~~~ 120 (129)
..++ .++. ...+.++++++++.+|.|++.+ .++||+++++||+.+.+++..||+||++++.
T Consensus 277 ~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvVi~~~~~ 346 (348)
T 3two_A 277 VFDFIHLGNRKVYGSLIGGIKETQEMVDFSIKHNIYPEI-DLILGKDIDTAYHNLTHGKAKFRYVIDMKKS 346 (348)
T ss_dssp HHHHHHTCSCEEEECCSCCHHHHHHHHHHHHHTTCCCCE-EEECGGGHHHHHHHHHTTCCCSEEEEEGGGC
T ss_pred HHHHHhhCCeEEEEEecCCHHHHHHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHcCCCceEEEEecCCc
Confidence 1233 3322 3456789999999999999976 4689999999999999999999999998754
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=2e-11 Score=87.94 Aligned_cols=116 Identities=41% Similarity=0.671 Sum_probs=85.1
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc----------------------------ccEEEecCCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR----------------------------GQNARCSASK 52 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~----------------------------G~~v~~G~~~ 52 (129)
.|++|+++++++++++.++ ++|+++++|+++.+++.+.+.+ |+++.+|...
T Consensus 169 ~G~~V~~~~~~~~~~~~~~-~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~ 247 (333)
T 1v3u_A 169 KGCKVVGAAGSDEKIAYLK-QIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAIS 247 (333)
T ss_dssp TTCEEEEEESSHHHHHHHH-HTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSCHHHHHHHHTTEEEEEEEEECCCCC
T ss_pred CCCEEEEEeCCHHHHHHHH-hcCCcEEEecCCHHHHHHHHHHHhCCCCeEEEECCChHHHHHHHHHHhcCCEEEEEeccc
Confidence 4899999999999999886 9999999998642345444331 8898888622
Q ss_pred C------CCCCCC--cceeccc-------------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccc
Q 039636 53 H------ETPREN--CSMWNDL-------------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVG 111 (129)
Q Consensus 53 ~------~~~~~~--~l~~~~~-------------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~G 111 (129)
. .....+ .++.++. ...+.++++++++.+|.+++.+..+++|+++++||+.+.+++..|
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~g 327 (333)
T 1v3u_A 248 VYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKIQYHEHVTKGFENMPAAFIEMLNGANLG 327 (333)
T ss_dssp -------CCBCCCHHHHHHTTCEEEECCGGGCCTHHHHHHHHHHHHHHHTTSSCCCEEEEECGGGHHHHHHHHHTTCCSB
T ss_pred cccCCCCCCCCcCHHHHhhcCceEEEEehhhcchHHHHHHHHHHHHHHHCCCccCccccccCHHHHHHHHHHHHcCCCCc
Confidence 1 101001 1111111 125678899999999999998877789999999999999998899
Q ss_pred eEEEEe
Q 039636 112 KQALDL 117 (129)
Q Consensus 112 kvvv~~ 117 (129)
|+||++
T Consensus 328 Kvvl~~ 333 (333)
T 1v3u_A 328 KAVVTA 333 (333)
T ss_dssp EEEEEC
T ss_pred eEEEeC
Confidence 999874
|
| >4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.35 E-value=8.8e-12 Score=90.49 Aligned_cols=115 Identities=26% Similarity=0.297 Sum_probs=83.4
Q ss_pred CcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc----------------------------ccEEEecCCC-
Q 039636 2 GCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR----------------------------GQNARCSASK- 52 (129)
Q Consensus 2 Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~----------------------------G~~v~~G~~~- 52 (129)
+++|++++ +++|.+.++ +|+++++| ++ .++.+.+++ |+++.+|..+
T Consensus 168 ~~~V~~~~-~~~~~~~~~--~ga~~~~~-~~-~~~~~~~~~~~~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~G~~~~ 242 (349)
T 4a27_A 168 NVTVFGTA-STFKHEAIK--DSVTHLFD-RN-ADYVQEVKRISAEGVDIVLDCLCGDNTGKGLSLLKPLGTYILYGSSNM 242 (349)
T ss_dssp TCEEEEEE-CGGGHHHHG--GGSSEEEE-TT-SCHHHHHHHHCTTCEEEEEEECC-------CTTEEEEEEEEEEC----
T ss_pred CcEEEEeC-CHHHHHHHH--cCCcEEEc-CC-ccHHHHHHHhcCCCceEEEECCCchhHHHHHHHhhcCCEEEEECCCcc
Confidence 36899988 566777764 99999999 55 677776653 8888887621
Q ss_pred --CCCC-------------CCC--cceeccc------------------chHHHHHHHHHHHHcCCceeeeeeecCcccH
Q 039636 53 --HETP-------------REN--CSMWNDL------------------TYSKFLDVVLPLIREGKIVYVEDIVEGLENA 97 (129)
Q Consensus 53 --~~~~-------------~~~--~l~~~~~------------------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~ 97 (129)
.... ..+ .++.++. ...+.++++++++.+|.|++.+..+|+|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~ 322 (349)
T 4a27_A 243 VTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKIKPVVDSLWALEEV 322 (349)
T ss_dssp ---------------------CHHHHHHHTCEEEEECHHHHHHTSCCHHHHHHHHHHHHHHHHTTSCCCCEEEEECGGGH
T ss_pred cccccccccccccccccccccCHHHHhhcCceEEEEeehheeccccchHHHHHHHHHHHHHHHCCCccccccceECHHHH
Confidence 1000 000 1111111 1267889999999999999998888999999
Q ss_pred HHHHHHHHcCCccceEEEEeCCCc
Q 039636 98 PAALLGLFSGRNVGKQALDLDSCL 121 (129)
Q Consensus 98 ~~a~~~~~~~~~~Gkvvv~~~~~~ 121 (129)
++||+.+.+++..||+||+++++.
T Consensus 323 ~~A~~~l~~~~~~GKvvi~~~~~~ 346 (349)
T 4a27_A 323 KEAMQRIHDRGNIGKLILDVEKTP 346 (349)
T ss_dssp HHHHHHHHTTCCSSEEEEETTCCC
T ss_pred HHHHHHHHhCCCCceEEEecCCCC
Confidence 999999999999999999998754
|
| >3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.35 E-value=4.8e-12 Score=92.76 Aligned_cols=116 Identities=15% Similarity=0.115 Sum_probs=84.1
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCC--CcccHHHHhcc------------------------------ccEEE
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYK--EEQDLVTALKR------------------------------GQNAR 47 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~--~~~~~~~~v~~------------------------------G~~v~ 47 (129)
+|+ +|++++.+++|+++++ ++|+++++|++ + .++.+.+++ |+++.
T Consensus 216 ~Ga~~Vi~~~~~~~~~~~a~-~lGa~~vi~~~~~~-~~~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~ 293 (378)
T 3uko_A 216 AGASRIIGIDIDSKKYETAK-KFGVNEFVNPKDHD-KPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVI 293 (378)
T ss_dssp HTCSCEEEECSCTTHHHHHH-TTTCCEEECGGGCS-SCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEE
T ss_pred cCCCeEEEEcCCHHHHHHHH-HcCCcEEEccccCc-hhHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccCCEEEE
Confidence 378 8999999999999998 99999999987 3 566665543 57777
Q ss_pred ecCCCCCC-CC-CC-ccee------ccc---chHHHHHHHHHHHHcCCceee--eeeecCcccHHHHHHHHHcCCccceE
Q 039636 48 CSASKHET-PR-EN-CSMW------NDL---TYSKFLDVVLPLIREGKIVYV--EDIVEGLENAPAALLGLFSGRNVGKQ 113 (129)
Q Consensus 48 ~G~~~~~~-~~-~~-~l~~------~~~---~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~Gkv 113 (129)
+|...... .. .. .++. ... ...+.+.++++++.+|.+++. +..+|||+++++||+.+.+++.. |+
T Consensus 294 ~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~g~~~-Kv 372 (378)
T 3uko_A 294 VGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCL-RC 372 (378)
T ss_dssp CSCCCTTCCEEECTHHHHTTCEEEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHTTCTTCS-EE
T ss_pred EcccCCCCccccCHHHHhcCcEEEEEEecCCCchHHHHHHHHHHHcCCCChhHheeeEeeHHHHHHHHHHHHCCCce-EE
Confidence 77522111 10 01 1111 111 245678999999999998754 55668999999999999988865 99
Q ss_pred EEEeCC
Q 039636 114 ALDLDS 119 (129)
Q Consensus 114 vv~~~~ 119 (129)
||++++
T Consensus 373 vi~~~~ 378 (378)
T 3uko_A 373 VLDTSK 378 (378)
T ss_dssp EEETTC
T ss_pred EEecCC
Confidence 999863
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=1.8e-12 Score=93.91 Aligned_cols=114 Identities=17% Similarity=0.109 Sum_probs=85.0
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecC
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSA 50 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~ 50 (129)
+|+ +|++++++++++++++ ++ +++++|+++ +++.+.+++ |+++.+|.
T Consensus 187 ~Ga~~Vi~~~~~~~~~~~~~-~l-a~~v~~~~~-~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 187 SGAGPILVSDPNPYRLAFAR-PY-ADRLVNPLE-EDLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGI 263 (343)
T ss_dssp TTCCSEEEECSCHHHHGGGT-TT-CSEEECTTT-SCHHHHHHHHHSSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCC
T ss_pred cCCCEEEEECCCHHHHHHHH-Hh-HHhccCcCc-cCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEec
Confidence 488 8999999999999997 89 999999887 677665542 88888876
Q ss_pred CCCCCC-CC-Ccceeccc-------c-hHHHHHHHHHHHHcCCc--eeeeeeecCcccHHHHHHHHHcCCccceEEEEeC
Q 039636 51 SKHETP-RE-NCSMWNDL-------T-YSKFLDVVLPLIREGKI--VYVEDIVEGLENAPAALLGLFSGRNVGKQALDLD 118 (129)
Q Consensus 51 ~~~~~~-~~-~~l~~~~~-------~-~~~~~~~~~~~~~~g~i--~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~~ 118 (129)
...... .. ..++.++. . ..+.++++++++.+|.+ ++.+..+|||+++++||+.+.+++. ||+||+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvv~~~~ 342 (343)
T 2dq4_A 264 PSDPIRFDLAGELVMRGITAFGIAGRRLWQTWMQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLLASGQA-VKVILDPK 342 (343)
T ss_dssp CSSCEEECHHHHTGGGTCEEEECCSCCTTHHHHHHHHHHHHTSSCCGGGEEEEEEGGGHHHHHHHHHHSSC-SEEEEETT
T ss_pred CCCCceeCcHHHHHhCceEEEEeecCCCHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCc-eEEEEeeC
Confidence 221110 01 11222222 2 46788999999999995 5666667899999999999999887 99999874
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=99.34 E-value=1.7e-12 Score=95.31 Aligned_cols=117 Identities=11% Similarity=0.044 Sum_probs=82.3
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------------ccE
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------------GQN 45 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------------G~~ 45 (129)
+||+||+++++++|+++++ ++|+++++|+++ +++.+.+++ |++
T Consensus 195 ~Ga~Vi~~~~~~~~~~~~~-~lGa~~~~~~~~-~~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~ 272 (379)
T 3iup_A 195 DGIKLVNIVRKQEQADLLK-AQGAVHVCNAAS-PTFMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAREY 272 (379)
T ss_dssp HTCCEEEEESSHHHHHHHH-HTTCSCEEETTS-TTHHHHHHHHHHHHCCCEEEESCEEESHHHHHHHHHHHHHHTTCCSC
T ss_pred CCCEEEEEECCHHHHHHHH-hCCCcEEEeCCC-hHHHHHHHHHhcCCCceEEEECCCchhhHHHHHHhcchhhhccccce
Confidence 3889999999999999998 999999999988 778777665 222
Q ss_pred EEecCCC-C------C-C--CC-CCcceeccc-----------------chHHHHHHHHHHHHcCCceeeeeeecCcccH
Q 039636 46 ARCSASK-H------E-T--PR-ENCSMWNDL-----------------TYSKFLDVVLPLIREGKIVYVEDIVEGLENA 97 (129)
Q Consensus 46 v~~G~~~-~------~-~--~~-~~~l~~~~~-----------------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~ 97 (129)
+.+|... + . . +. .+.++.++. ...+.++++++++.+ .+++.+..+|+|+++
T Consensus 273 ~~~G~~~~g~iv~~G~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~i~~~~~l~~~ 351 (379)
T 3iup_A 273 SRYGSTTHKQVYLYGGLDTSPTEFNRNFGMAWGMGGWLLFPFLQKIGRERANALKQRVVAELKT-TFASHYSKEISLAEV 351 (379)
T ss_dssp CTTCCCSCEEEEECCCSEEEEEEECCCSCSCEEEEECCHHHHHHHHCHHHHHHHHHHHHHTTTT-TTCCCCSEEEEHHHH
T ss_pred eecccccCceEEEecCCCCCccccccccccceEEEEEEeeeecccCCHHHHHHHHHHHHHHHhc-cCCCcceEEecHHHh
Confidence 2222100 0 0 0 00 001111111 123456777788877 588888888999999
Q ss_pred --HHHHHHHHcCCccceEEEEeCCC
Q 039636 98 --PAALLGLFSGRNVGKQALDLDSC 120 (129)
Q Consensus 98 --~~a~~~~~~~~~~Gkvvv~~~~~ 120 (129)
++||+.+.+++..||+||+++..
T Consensus 352 ~~~~A~~~l~~~~~~gKvVv~~~~g 376 (379)
T 3iup_A 352 LDLDMIAVYNKRATGEKYLINPNKG 376 (379)
T ss_dssp TCHHHHHHHTTCCTTCCEEEETTTT
T ss_pred hhHHHHHHHhcCCCCceEEEeCCCC
Confidence 99999999999999999998643
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=99.33 E-value=9.4e-12 Score=90.40 Aligned_cols=118 Identities=14% Similarity=0.143 Sum_probs=82.3
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHh----c----c-------------------------ccEEE
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTAL----K----R-------------------------GQNAR 47 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v----~----~-------------------------G~~v~ 47 (129)
+|++|++++++++++++++ ++|+++++|+++..++.+.+ . . |+++.
T Consensus 191 ~Ga~Vi~~~~~~~~~~~~~-~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~ 269 (352)
T 1e3j_A 191 YGAFVVCTARSPRRLEVAK-NCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLML 269 (352)
T ss_dssp TTCEEEEEESCHHHHHHHH-HTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEE
T ss_pred cCCEEEEEcCCHHHHHHHH-HhCCCEEEcCcccccHHHHHHHHhccccCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEE
Confidence 5899999999999999998 99999999987202222221 1 1 88888
Q ss_pred ecCCCCCCCCC-Ccceeccc------chHHHHHHHHHHHHcCCce--eeeeeecCcccHHHHHHHHHcCC-ccceEEEEe
Q 039636 48 CSASKHETPRE-NCSMWNDL------TYSKFLDVVLPLIREGKIV--YVEDIVEGLENAPAALLGLFSGR-NVGKQALDL 117 (129)
Q Consensus 48 ~G~~~~~~~~~-~~l~~~~~------~~~~~~~~~~~~~~~g~i~--~~~~~~~~l~~~~~a~~~~~~~~-~~Gkvvv~~ 117 (129)
+|........+ ..++.++. .....++++++++.+|.++ +.+..+|||+++++||+.+.+++ ..||+||++
T Consensus 270 ~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~ 349 (352)
T 1e3j_A 270 VGMGSQMVTVPLVNACAREIDIKSVFRYCNDYPIALEMVASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMISC 349 (352)
T ss_dssp CSCCSSCCCCCHHHHHTTTCEEEECCSCSSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHHCCTTCSEEEEEC
T ss_pred EecCCCCccccHHHHHhcCcEEEEeccchHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCCCceEEEEec
Confidence 87622111100 01222211 2234578999999999975 45555689999999999999988 689999988
Q ss_pred CC
Q 039636 118 DS 119 (129)
Q Consensus 118 ~~ 119 (129)
.+
T Consensus 350 ~~ 351 (352)
T 1e3j_A 350 RQ 351 (352)
T ss_dssp CC
T ss_pred CC
Confidence 64
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.32 E-value=2.3e-11 Score=89.10 Aligned_cols=114 Identities=20% Similarity=0.242 Sum_probs=83.1
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc----------------------------ccEEEecCCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR----------------------------GQNARCSASK 52 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~----------------------------G~~v~~G~~~ 52 (129)
+|++|++++ +++++++++ ++|+++++|+++ +++.+.+.+ |+++.+|...
T Consensus 207 ~Ga~Vi~~~-~~~~~~~~~-~lGa~~v~~~~~-~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~ 283 (375)
T 2vn8_A 207 WDAHVTAVC-SQDASELVR-KLGADDVIDYKS-GSVEEQLKSLKPFDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPF 283 (375)
T ss_dssp TTCEEEEEE-CGGGHHHHH-HTTCSEEEETTS-SCHHHHHHTSCCBSEEEESSCTTHHHHGGGGBCSSSCCEEEESCCSH
T ss_pred CCCEEEEEe-ChHHHHHHH-HcCCCEEEECCc-hHHHHHHhhcCCCCEEEECCCChhhhhHHHHHhhcCCcEEEEeCCCc
Confidence 489999998 567889887 999999999987 677666543 6666665411
Q ss_pred CCCCCC----C-------ccee-------ccc--------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHc
Q 039636 53 HETPRE----N-------CSMW-------NDL--------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFS 106 (129)
Q Consensus 53 ~~~~~~----~-------~l~~-------~~~--------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~ 106 (129)
...... . .++. ... ...+.++++++++.+|.|++.+..+|||+++++||+.+.+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~ 363 (375)
T 2vn8_A 284 LLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFFMASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVER 363 (375)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHHHTTSCCCCEEEEEEGGGHHHHHHHHHH
T ss_pred ccccccccccchhheeehhhccccccccccCcceEEEEeCCCHHHHHHHHHHHHCCCcccCcCeEECHHHHHHHHHHHHc
Confidence 000000 0 0000 110 2356789999999999999888877999999999999999
Q ss_pred CCccceEEEEe
Q 039636 107 GRNVGKQALDL 117 (129)
Q Consensus 107 ~~~~Gkvvv~~ 117 (129)
++..||+|+++
T Consensus 364 ~~~~gKvvi~~ 374 (375)
T 2vn8_A 364 GHARGKTVINV 374 (375)
T ss_dssp CCCSSEEEEEC
T ss_pred CCCCCeEEEEe
Confidence 98899999975
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=99.32 E-value=6.6e-12 Score=89.42 Aligned_cols=116 Identities=22% Similarity=0.179 Sum_probs=81.8
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHh------------------cc----ccEEEecCCCCCC--C
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTAL------------------KR----GQNARCSASKHET--P 56 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v------------------~~----G~~v~~G~~~~~~--~ 56 (129)
+|++|+++++++++++.++ ++|+++++|+++..++.+.+ .. |+++.+|...... .
T Consensus 149 ~Ga~Vi~~~~~~~~~~~~~-~~ga~~~~~~~~~~~~~~~~~~~d~vid~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~ 227 (302)
T 1iz0_A 149 MGLRVLAAASRPEKLALPL-ALGAEEAATYAEVPERAKAWGGLDLVLEVRGKEVEESLGLLAHGGRLVYIGAAEGEVAPI 227 (302)
T ss_dssp TTCEEEEEESSGGGSHHHH-HTTCSEEEEGGGHHHHHHHTTSEEEEEECSCTTHHHHHTTEEEEEEEEEC-------CCC
T ss_pred CCCEEEEEeCCHHHHHHHH-hcCCCEEEECCcchhHHHHhcCceEEEECCHHHHHHHHHhhccCCEEEEEeCCCCCCCCc
Confidence 4899999999999999997 89999999875302333322 11 8888887622211 1
Q ss_pred CCCcceeccc-----------chHHHHHHHHH---HHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEEe
Q 039636 57 RENCSMWNDL-----------TYSKFLDVVLP---LIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDL 117 (129)
Q Consensus 57 ~~~~l~~~~~-----------~~~~~~~~~~~---~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~ 117 (129)
..+.++.++. ...+.++++++ ++.+|.+++.+..+|+|+++++||+.+.+++..||+|+++
T Consensus 228 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 302 (302)
T 1iz0_A 228 PPLRLMRRNLAVLGFWLTPLLREGALVEEALGFLLPRLGRELRPVVGPVFPFAEAEAAFRALLDRGHTGKVVVRL 302 (302)
T ss_dssp CTTHHHHTTCEEEECCHHHHTTCHHHHHHHHHHHGGGBTTTBCCCEEEEEEGGGHHHHHHHTTCTTCCBEEEEEC
T ss_pred CHHHHHhCCCeEEEEeccchhhhHHHHHHHHhhhHHHHcCCcccccceEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 1111222211 13567899999 9999999998877899999999999999988899999863
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=99.31 E-value=3.5e-12 Score=91.76 Aligned_cols=112 Identities=13% Similarity=0.160 Sum_probs=76.8
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc----------------------------ccEEEecCCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR----------------------------GQNARCSASK 52 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~----------------------------G~~v~~G~~~ 52 (129)
+|++|++++++++++++++ ++|+++++|+++ .+ .+.+++ |+++.+|...
T Consensus 173 ~Ga~vi~~~~~~~~~~~~~-~lGa~~~i~~~~-~~-~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~G~~~ 249 (328)
T 1xa0_A 173 RGYTVEASTGKAAEHDYLR-VLGAKEVLARED-VM-AERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYGGAVAVSGLTG 249 (328)
T ss_dssp TTCCEEEEESCTTCHHHHH-HTTCSEEEECC-----------CCSCCEEEEEECSTTTTHHHHHHTEEEEEEEEECSCCS
T ss_pred CCCEEEEEECCHHHHHHHH-HcCCcEEEecCC-cH-HHHHHHhcCCcccEEEECCcHHHHHHHHHhhccCCEEEEEeecC
Confidence 4899999999999999998 899999999875 32 221111 8888888632
Q ss_pred CCCCC--------CC-cceeccc------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEEe
Q 039636 53 HETPR--------EN-CSMWNDL------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDL 117 (129)
Q Consensus 53 ~~~~~--------~~-~l~~~~~------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~ 117 (129)
..... ++ .+..... ...+.++++.+++.+| +++. ..+|+|+++++||+.+.+++..||+||++
T Consensus 250 ~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~g-l~~~-~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 327 (328)
T 1xa0_A 250 GAEVPTTVHPFILRGVSLLGIDSVYCPMDLRLRIWERLAGDLKPD-LERI-AQEISLAELPQALKRILRGELRGRTVVRL 327 (328)
T ss_dssp SSCCCCCSHHHHHTTCEEEECCSSSCCHHHHHHHHHHHHTTTCCC-HHHH-EEEEEGGGHHHHHHHHHHTCCCSEEEEEC
T ss_pred CCCCCCchhhhhhcCceEEEEecccCCHHHHHHHHHHHHHHHHcC-Ccee-eeEeCHHHHHHHHHHHHcCCCCCeEEEEe
Confidence 21111 11 1111100 1245677778888888 8774 45689999999999999998899999986
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=99.31 E-value=2e-11 Score=88.42 Aligned_cols=115 Identities=12% Similarity=0.153 Sum_probs=82.6
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~ 51 (129)
+||+|+++ .+++++++++ ++|++. +| ++ .++.+.+.+ |+++.+|..
T Consensus 174 ~Ga~Vi~~-~~~~~~~~~~-~lGa~~-i~-~~-~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~g~~ 248 (343)
T 3gaz_A 174 RGARVFAT-ARGSDLEYVR-DLGATP-ID-AS-REPEDYAAEHTAGQGFDLVYDTLGGPVLDASFSAVKRFGHVVSCLGW 248 (343)
T ss_dssp TTCEEEEE-ECHHHHHHHH-HHTSEE-EE-TT-SCHHHHHHHHHTTSCEEEEEESSCTHHHHHHHHHEEEEEEEEESCCC
T ss_pred CCCEEEEE-eCHHHHHHHH-HcCCCE-ec-cC-CCHHHHHHHHhcCCCceEEEECCCcHHHHHHHHHHhcCCeEEEEccc
Confidence 48999999 7888999997 999998 77 44 566665543 788888763
Q ss_pred CCCCCC----CC-cceeccc-----------chHHHHHHHHHHHHcCCceeeee-eecCcccHHHHHHHHHcCCc----c
Q 039636 52 KHETPR----EN-CSMWNDL-----------TYSKFLDVVLPLIREGKIVYVED-IVEGLENAPAALLGLFSGRN----V 110 (129)
Q Consensus 52 ~~~~~~----~~-~l~~~~~-----------~~~~~~~~~~~~~~~g~i~~~~~-~~~~l~~~~~a~~~~~~~~~----~ 110 (129)
...... ++ .+..... ...+.++++++++.+|.|++.+. .+|+|+++++||+.+.+++. .
T Consensus 249 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~l~~~~~A~~~~~~~~~~Gr~~ 328 (343)
T 3gaz_A 249 GTHKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALVQTGKLAPRLDPRTFSIAEIGSAYDAVLGRNDVPRQR 328 (343)
T ss_dssp SCCCCHHHHHTTCEEEECCTTHHHHHTCSHHHHHHHHHHHHHHHHTTCCCCCBCSCCEETTCHHHHHHHHHTCTTCCCCS
T ss_pred CccccchhhhcCcEEEEEEeccchhcccchHHHHHHHHHHHHHHHCCCcccCccCcEecHHHHHHHHHHHHcCCCccccc
Confidence 211110 11 1111000 23478899999999999999888 57999999999999998765 6
Q ss_pred ceEEEEeCCC
Q 039636 111 GKQALDLDSC 120 (129)
Q Consensus 111 Gkvvv~~~~~ 120 (129)
||+|++..-+
T Consensus 329 GK~v~~~~~~ 338 (343)
T 3gaz_A 329 GKIAITVEGH 338 (343)
T ss_dssp SBCEEECC--
T ss_pred ceEEEEeccc
Confidence 8999987543
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=99.29 E-value=2.6e-12 Score=95.05 Aligned_cols=112 Identities=15% Similarity=0.164 Sum_probs=79.6
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------------cc
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------------GQ 44 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------------G~ 44 (129)
+|+ +|++++++++|+++++ ++|+++++|+++ +++.+.+++ |+
T Consensus 236 ~Ga~~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~-~~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~ 313 (404)
T 3ip1_A 236 AGASKVILSEPSEVRRNLAK-ELGADHVIDPTK-ENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINAT 313 (404)
T ss_dssp TTCSEEEEECSCHHHHHHHH-HHTCSEEECTTT-SCHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCE
T ss_pred cCCCEEEEECCCHHHHHHHH-HcCCCEEEcCCC-CCHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcE
Confidence 588 9999999999999998 999999999877 666655543 55
Q ss_pred EEEecCCCCCCCCC-Ccceeccc--------chHHHHHHHHHHHHcCCcee--eeeeecCcccHHHHHHHHHcCCccceE
Q 039636 45 NARCSASKHETPRE-NCSMWNDL--------TYSKFLDVVLPLIREGKIVY--VEDIVEGLENAPAALLGLFSGRNVGKQ 113 (129)
Q Consensus 45 ~v~~G~~~~~~~~~-~~l~~~~~--------~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~Gkv 113 (129)
++.+|......... ..++.++. ...+.++++++++.+| +++ .+..+|+|+++++||+.+. .||+
T Consensus 314 iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~ll~~g-l~~~~~i~~~~~l~~~~~A~~~~~----~GKv 388 (404)
T 3ip1_A 314 VAIVARADAKIPLTGEVFQVRRAQIVGSQGHSGHGTFPRVISLMASG-MDMTKIISKTVSMEEIPEYIKRLQ----TDKS 388 (404)
T ss_dssp EEECSCCCSCEEECHHHHHHTTCEEEECCCCCSTTHHHHHHHHHHTT-CCGGGGCCEEECGGGHHHHHHHTT----TCTT
T ss_pred EEEeCCCCCCCcccHHHHhccceEEEEecCCCchHHHHHHHHHHHcC-CChhheEEEEeeHHHHHHHHHHHh----CCcE
Confidence 66655421111000 01222221 2256789999999999 765 4555689999999999987 6899
Q ss_pred EEEeCC
Q 039636 114 ALDLDS 119 (129)
Q Consensus 114 vv~~~~ 119 (129)
||++++
T Consensus 389 vl~~~~ 394 (404)
T 3ip1_A 389 LVKVTM 394 (404)
T ss_dssp CSCEEE
T ss_pred EEecCC
Confidence 988864
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=99.28 E-value=3.2e-12 Score=93.13 Aligned_cols=117 Identities=13% Similarity=0.079 Sum_probs=80.9
Q ss_pred CCcE-EEEEeCChHHHHHHHHhcCCCEEEeCC----CcccHHHHhcc------------------------------ccE
Q 039636 1 MGCY-VVGSAGSKEKIERLKNKFAFDDAFNYK----EEQDLVTALKR------------------------------GQN 45 (129)
Q Consensus 1 ~Ga~-Vi~t~~s~~k~~~~~~~lGad~vi~~~----~~~~~~~~v~~------------------------------G~~ 45 (129)
+|++ |++++++++|+++++ ++ +++++++. +.+++.+.+++ |++
T Consensus 202 ~Ga~~Vi~~~~~~~~~~~a~-~l-~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~i 279 (363)
T 3m6i_A 202 AGACPLVITDIDEGRLKFAK-EI-CPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKV 279 (363)
T ss_dssp TTCCSEEEEESCHHHHHHHH-HH-CTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTTCEE
T ss_pred cCCCEEEEECCCHHHHHHHH-Hh-chhcccccccccchHHHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEE
Confidence 4886 999999999999998 88 76666543 11355555543 888
Q ss_pred EEecCCCCCC-CCCCcceeccc------chHHHHHHHHHHHHcCCc--eeeeeeecCcccHHHHHHHHHcC-CccceEEE
Q 039636 46 ARCSASKHET-PRENCSMWNDL------TYSKFLDVVLPLIREGKI--VYVEDIVEGLENAPAALLGLFSG-RNVGKQAL 115 (129)
Q Consensus 46 v~~G~~~~~~-~~~~~l~~~~~------~~~~~~~~~~~~~~~g~i--~~~~~~~~~l~~~~~a~~~~~~~-~~~Gkvvv 115 (129)
+.+|...... .....++.++. ...+.++++++++.+|.+ ++.+..+|||+++++||+.+.++ ...||+||
T Consensus 280 v~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi 359 (363)
T 3m6i_A 280 FVIGVGKNEIQIPFMRASVREVDLQFQYRYCNTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIKVQI 359 (363)
T ss_dssp EECCCCCSCCCCCHHHHHHHTCEEEECCSCSSCHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHCGGGCCSEEEE
T ss_pred EEEccCCCCccccHHHHHhcCcEEEEccCCHHHHHHHHHHHHhCCCChHHceeeeeeHHHHHHHHHHHhccCCCeEEEEE
Confidence 8887622211 11011222211 225668899999999999 44555678999999999999998 67899999
Q ss_pred EeCC
Q 039636 116 DLDS 119 (129)
Q Consensus 116 ~~~~ 119 (129)
++++
T Consensus 360 ~~~~ 363 (363)
T 3m6i_A 360 QSLE 363 (363)
T ss_dssp ECC-
T ss_pred ecCC
Confidence 9864
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=8.6e-13 Score=95.01 Aligned_cols=115 Identities=19% Similarity=0.264 Sum_probs=80.3
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCccc-----------------------HHHHhcc----ccEEEecCCCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQD-----------------------LVTALKR----GQNARCSASKH 53 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~-----------------------~~~~v~~----G~~v~~G~~~~ 53 (129)
+|++|++++++++++++++ ++|+++++|+++ .+ +...+.. |+++.+|....
T Consensus 174 ~Ga~vi~~~~~~~~~~~~~-~lGa~~v~~~~~-~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~ 251 (330)
T 1tt7_A 174 RGYDVVASTGNREAADYLK-QLGASEVISRED-VYDGTLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTGG 251 (330)
T ss_dssp HTCCEEEEESSSSTHHHHH-HHTCSEEEEHHH-HCSSCCCSSCCCCEEEEEESCCTHHHHHHHTTEEEEEEEEECCCSSC
T ss_pred CCCEEEEEeCCHHHHHHHH-HcCCcEEEECCC-chHHHHHHhhcCCccEEEECCcHHHHHHHHHhhcCCCEEEEEecCCC
Confidence 3789999999999999998 899999998643 21 0011110 89988886322
Q ss_pred CCCC--------CC-cceeccc------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEEe
Q 039636 54 ETPR--------EN-CSMWNDL------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDL 117 (129)
Q Consensus 54 ~~~~--------~~-~l~~~~~------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~ 117 (129)
.... ++ .+..... ...+.++++.+++.+|.+++.+..+|||+++++||+.+.+++..||+||++
T Consensus 252 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~ 330 (330)
T 1tt7_A 252 GEVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWERMSSDLKPDQLLTIVDREVSLEETPGALKDILQNRIQGRVIVKL 330 (330)
T ss_dssp SCEEECSHHHHTSCCEEEECCSSSCCHHHHHHHHHHTTTTSCCSCSTTSEEEEECSTTHHHHHHHTTTTCCSSEEEECC
T ss_pred CccCcchHHHHhcCeEEEEEeccccCHHHHHHHHHHHHHHHhcCCcccccceEEcHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 1110 11 1111100 124567777888888999888877799999999999999998899999864
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A | Back alignment and structure |
|---|
Probab=99.23 E-value=3.4e-11 Score=87.61 Aligned_cols=116 Identities=16% Similarity=0.238 Sum_probs=77.8
Q ss_pred CCcEEEEEeCCh----HHHHHHHHhcCCCEEEeCCCc--ccHHHH----------------------hcc----ccEEEe
Q 039636 1 MGCYVVGSAGSK----EKIERLKNKFAFDDAFNYKEE--QDLVTA----------------------LKR----GQNARC 48 (129)
Q Consensus 1 ~Ga~Vi~t~~s~----~k~~~~~~~lGad~vi~~~~~--~~~~~~----------------------v~~----G~~v~~ 48 (129)
+||+||++++++ +++++++ ++|+++++|+++. +.+.+. +.. |+++.+
T Consensus 191 ~Ga~vi~~~~~~~~~~~~~~~~~-~lGa~~vi~~~~~~~~~~~~~~~~~~~~Dvvid~~g~~~~~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 191 LGLRTINVVRDRPDIQKLSDRLK-SLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTELLRQLARGGTMVTY 269 (357)
T ss_dssp HTCEEEEEECCCSCHHHHHHHHH-HTTCSEEEEHHHHHSGGGGGTTSSSCCCSEEEESSCHHHHHHHHTTSCTTCEEEEC
T ss_pred cCCEEEEEecCccchHHHHHHHH-hcCCcEEEecCcchHHHHHHHHhCCCCceEEEECCCcHHHHHHHHhhCCCCEEEEE
Confidence 388888888653 3567887 9999999986420 011110 000 888888
Q ss_pred cCCCCCCCCCC--cceeccc-----------------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCc
Q 039636 49 SASKHETPREN--CSMWNDL-----------------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRN 109 (129)
Q Consensus 49 G~~~~~~~~~~--~l~~~~~-----------------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~ 109 (129)
|.........+ .++.++. ...+.++++++++.+|.+++.+..+|||+++++||+.+.+++.
T Consensus 270 G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~ 349 (357)
T 1zsy_A 270 GGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAPACSQVPLQDYQSALEASMKPFI 349 (357)
T ss_dssp CCCTTCCBCCCHHHHHHSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCCEEEEEGGGHHHHHHHHTSSSC
T ss_pred ecCCCCCCCCCHHHHHhcCceEEEEEcchhcccCCHHHHHHHHHHHHHHHHcCCCcCccceEEcHHHHHHHHHHHHhCCC
Confidence 75221111100 1111111 1245678999999999999887777999999999999999988
Q ss_pred cceEEEEe
Q 039636 110 VGKQALDL 117 (129)
Q Consensus 110 ~Gkvvv~~ 117 (129)
.||+||++
T Consensus 350 ~gKvvl~~ 357 (357)
T 1zsy_A 350 SSKQILTM 357 (357)
T ss_dssp SSEEEEEC
T ss_pred CCcEEEeC
Confidence 89999974
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=99.22 E-value=1.2e-10 Score=85.23 Aligned_cols=115 Identities=14% Similarity=0.111 Sum_probs=81.0
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCC-cccHHHHhcc------------------------------ccEEEe
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKE-EQDLVTALKR------------------------------GQNARC 48 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~-~~~~~~~v~~------------------------------G~~v~~ 48 (129)
+|+ +|++++++++++++++ ++|+++++|+++ .+++.+.+++ |+++.+
T Consensus 215 ~Ga~~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 215 AGAKRIIAVDLNPDKFEKAK-VFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp TTCSEEEEECSCGGGHHHHH-HTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEEC
T ss_pred cCCCEEEEEcCCHHHHHHHH-HhCCceEEeccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCcEEEEE
Confidence 488 8999999999999998 999999999863 1345554432 477777
Q ss_pred cCCCCCCCCCC--cceec-cc--------chHHHHHHHHHHHHcCCcee--eeeeecCcccHHHHHHHHHcCCccceEEE
Q 039636 49 SASKHETPREN--CSMWN-DL--------TYSKFLDVVLPLIREGKIVY--VEDIVEGLENAPAALLGLFSGRNVGKQAL 115 (129)
Q Consensus 49 G~~~~~~~~~~--~l~~~-~~--------~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv 115 (129)
|.........+ .++.+ .+ ...+.++++++++.+|.+++ .+..+|||+++++||+.+.+++. +|+||
T Consensus 294 G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi 372 (374)
T 1cdo_A 294 GWTDLHDVATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKC-IRTVL 372 (374)
T ss_dssp SCCSSSCEEECHHHHHTTCEEEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEE
T ss_pred cCCCCCCcccCHHHHhcCCeEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeeEecHHHHHHHHHHHHCCCe-eEEEE
Confidence 65221111000 11111 11 13567899999999999974 45566899999999999998775 79998
Q ss_pred Ee
Q 039636 116 DL 117 (129)
Q Consensus 116 ~~ 117 (129)
++
T Consensus 373 ~~ 374 (374)
T 1cdo_A 373 SL 374 (374)
T ss_dssp EC
T ss_pred eC
Confidence 75
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=5.8e-12 Score=91.71 Aligned_cols=112 Identities=9% Similarity=0.038 Sum_probs=82.6
Q ss_pred CCcE-EEEEeCChH---HHHHHHHhcCCCEEEeCCCcccHHHHhc----c------------------------ccEEEe
Q 039636 1 MGCY-VVGSAGSKE---KIERLKNKFAFDDAFNYKEEQDLVTALK----R------------------------GQNARC 48 (129)
Q Consensus 1 ~Ga~-Vi~t~~s~~---k~~~~~~~lGad~vi~~~~~~~~~~~v~----~------------------------G~~v~~ 48 (129)
+|++ |++++++++ |+++++ ++|++++ |+++ +++.+ ++ . |+++.+
T Consensus 197 ~Ga~~Vi~~~~~~~~~~~~~~~~-~lGa~~v-~~~~-~~~~~-i~~~~gg~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~ 272 (357)
T 2b5w_A 197 KGYENLYCLGRRDRPDPTIDIIE-ELDATYV-DSRQ-TPVED-VPDVYEQMDFIYEATGFPKHAIQSVQALAPNGVGALL 272 (357)
T ss_dssp TCCCEEEEEECCCSSCHHHHHHH-HTTCEEE-ETTT-SCGGG-HHHHSCCEEEEEECSCCHHHHHHHHHHEEEEEEEEEC
T ss_pred cCCcEEEEEeCCcccHHHHHHHH-HcCCccc-CCCc-cCHHH-HHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEE
Confidence 4886 999999998 999998 9999999 9876 45433 22 0 899988
Q ss_pred cCCCCCCCCCC--cc----eeccc-------chHHHHHHHHHHHHcC--C-ceeeeeeecCcccHHHHHHHHHcCCccce
Q 039636 49 SASKHETPREN--CS----MWNDL-------TYSKFLDVVLPLIREG--K-IVYVEDIVEGLENAPAALLGLFSGRNVGK 112 (129)
Q Consensus 49 G~~~~~~~~~~--~l----~~~~~-------~~~~~~~~~~~~~~~g--~-i~~~~~~~~~l~~~~~a~~~~~~~~~~Gk 112 (129)
|.........+ .+ +.++. ...+.++++++++.+| . +++.+..+|+|+++++||+.+ +..||
T Consensus 273 g~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~~~~~~~~i~~~~~l~~~~~A~~~~---~~~gK 349 (357)
T 2b5w_A 273 GVPSDWAFEVDAGAFHREMVLHNKALVGSVNSHVEHFEAATVTFTKLPKWFLEDLVTGVHPLSEFEAAFDDD---DTTIK 349 (357)
T ss_dssp CCCCCCCCCCCHHHHHHHHHHTTCEEEECCCCCHHHHHHHHHHHHHSCHHHHHHHEEEEEEGGGGGGGGCCS---TTCCE
T ss_pred eCCCCCCceecHHHHhHHHHhCCeEEEEeccCCHHHHHHHHHHHHhCchhhhhhhcceeecHHHHHHHHHHh---CCCce
Confidence 87331111111 23 33332 3467889999999999 8 677777779999999999988 45799
Q ss_pred EEEEeCC
Q 039636 113 QALDLDS 119 (129)
Q Consensus 113 vvv~~~~ 119 (129)
+||++++
T Consensus 350 vvi~~~~ 356 (357)
T 2b5w_A 350 TAIEFST 356 (357)
T ss_dssp EEEECCC
T ss_pred EEEEecC
Confidence 9999864
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A | Back alignment and structure |
|---|
Probab=99.20 E-value=2.4e-11 Score=88.50 Aligned_cols=116 Identities=10% Similarity=0.170 Sum_probs=79.7
Q ss_pred CCcEEEEEeCChHH----HHHHHHhcCCCEEEeCCCc--ccHHHHhc-------c------------------------c
Q 039636 1 MGCYVVGSAGSKEK----IERLKNKFAFDDAFNYKEE--QDLVTALK-------R------------------------G 43 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k----~~~~~~~lGad~vi~~~~~--~~~~~~v~-------~------------------------G 43 (129)
+||+||++++++++ +++++ ++|+++++|+++. .++.+.++ . |
T Consensus 191 ~Ga~vi~~~~~~~~~~~~~~~~~-~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g~Dvvid~~G~~~~~~~~~~l~~~G 269 (364)
T 1gu7_A 191 LNFNSISVIRDRPNLDEVVASLK-ELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNG 269 (364)
T ss_dssp HTCEEEEEECCCTTHHHHHHHHH-HHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTC
T ss_pred CCCEEEEEecCccccHHHHHHHH-hcCCeEEEecCccchHHHHHHHHHHhhccCCCceEEEECCCchhHHHHHHHhccCC
Confidence 38999999876654 57776 9999999998630 23443332 1 8
Q ss_pred cEEEecCCCCCCCC-C-Ccceeccc----------------chHHHHHHHHHHHHcCCceeeeeeecCc---ccHHHHHH
Q 039636 44 QNARCSASKHETPR-E-NCSMWNDL----------------TYSKFLDVVLPLIREGKIVYVEDIVEGL---ENAPAALL 102 (129)
Q Consensus 44 ~~v~~G~~~~~~~~-~-~~l~~~~~----------------~~~~~~~~~~~~~~~g~i~~~~~~~~~l---~~~~~a~~ 102 (129)
+++.+|........ . ..++.++. ...+.++++++++.+|.+++.+..++++ +++.+||+
T Consensus 270 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~l~~~~~A~~ 349 (364)
T 1gu7_A 270 LMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQ 349 (364)
T ss_dssp EEEECCCCSSCCEEECHHHHHHSCCEEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTCCCCCCCEEEECCSSSCHHHHHH
T ss_pred EEEEecCCCCCCcccCHHHHhhcCcEEEEEchhHhcccCHHHHHHHHHHHHHHHHcCCcccccceEEecCchhhHHHHHH
Confidence 88888763221110 0 01111111 1146789999999999999876666655 59999999
Q ss_pred HHHcCCccceEEEEe
Q 039636 103 GLFSGRNVGKQALDL 117 (129)
Q Consensus 103 ~~~~~~~~Gkvvv~~ 117 (129)
.+.+++..||+||++
T Consensus 350 ~~~~~~~~gKvvv~~ 364 (364)
T 1gu7_A 350 DGVANSKDGKQLITY 364 (364)
T ss_dssp HHHHTGGGSCEEEEC
T ss_pred HHHhCCCCceEEEeC
Confidence 999998899999975
|
| >3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=99.20 E-value=3.4e-11 Score=86.18 Aligned_cols=115 Identities=14% Similarity=0.067 Sum_probs=76.4
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEe--------------CCCcccHHHHhcc----ccEEEecCCCCCCC-C--CC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFN--------------YKEEQDLVTALKR----GQNARCSASKHETP-R--EN 59 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~--------------~~~~~~~~~~v~~----G~~v~~G~~~~~~~-~--~~ 59 (129)
+||+|++++ +++|+++++ ++|++++++ ....+.+...+.. |+++.+|....... . ..
T Consensus 165 ~Ga~Vi~~~-~~~~~~~~~-~lGa~~v~~d~~~v~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~ 242 (315)
T 3goh_A 165 AGYVVDLVS-ASLSQALAA-KRGVRHLYREPSQVTQKYFAIFDAVNSQNAAALVPSLKANGHIICIQDRIPAPIDPAFTR 242 (315)
T ss_dssp HTCEEEEEC-SSCCHHHHH-HHTEEEEESSGGGCCSCEEEEECC-------TTGGGEEEEEEEEEECCC----------C
T ss_pred cCCEEEEEE-ChhhHHHHH-HcCCCEEEcCHHHhCCCccEEEECCCchhHHHHHHHhcCCCEEEEEeCCCCccccchhhh
Confidence 389999999 889999998 899988773 1110111111111 89998875211110 0 01
Q ss_pred cceeccc---------------chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCccceEEEEeCC
Q 039636 60 CSMWNDL---------------TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNVGKQALDLDS 119 (129)
Q Consensus 60 ~l~~~~~---------------~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv~~~~ 119 (129)
.+..+.. ...+.++++++++.+|.|++.+..+|||+++++||+.+. +..||+|+++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~--~~~gKvvi~~~~ 315 (315)
T 3goh_A 243 TISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQGKMEIAAPDIFRFEQMIEALDHSE--QTKLKTVLTLNE 315 (315)
T ss_dssp CSEEEEECGGGHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCCCCEEEEGGGHHHHHHHHH--HHCCCEEEESCC
T ss_pred cceeeEEEeecccccCChhHHHHHHHHHHHHHHHHHCCCcccccceEecHHHHHHHHHHHH--hcCCcEEEEecC
Confidence 1111111 123467899999999999998888899999999999998 778999999863
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=1.9e-10 Score=84.20 Aligned_cols=114 Identities=12% Similarity=0.111 Sum_probs=80.1
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCC-cccHHHHhcc------------------------------ccEEEe
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKE-EQDLVTALKR------------------------------GQNARC 48 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~-~~~~~~~v~~------------------------------G~~v~~ 48 (129)
+|+ +|++++++++|+++++ ++|+++++|+++ .+++.+.+++ |+++.+
T Consensus 218 ~Ga~~Vi~~~~~~~~~~~a~-~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 218 AGASRIIAIDINGEKFPKAK-ALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp TTCSEEEEECSCGGGHHHHH-HTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEEC
T ss_pred cCCCeEEEEcCCHHHHHHHH-HhCCcEEEccccccchHHHHHHHHhCCCccEEEECCCCHHHHHHHHHHhhcCCCEEEEE
Confidence 488 8999999999999998 999999999863 1346555543 466666
Q ss_pred cCCCCCCCCCC--cceec------cc---chHHHHHHHHHHHHcCCcee--eeeeecCcccHHHHHHHHHcCCccceEEE
Q 039636 49 SASKHETPREN--CSMWN------DL---TYSKFLDVVLPLIREGKIVY--VEDIVEGLENAPAALLGLFSGRNVGKQAL 115 (129)
Q Consensus 49 G~~~~~~~~~~--~l~~~------~~---~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv 115 (129)
|.. ......+ .++.+ .. ...+.++++++++.+|.|++ .+..+|||+++++||+.+.+++ .+|+||
T Consensus 297 G~~-~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~-~~Kvvi 374 (376)
T 1e3i_A 297 GAK-VDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGK-SIRTIL 374 (376)
T ss_dssp CCS-SSEEEEEHHHHHTTCEEEECSGGGCCHHHHHHHHHHHHHTTSSCGGGGEEEEEEGGGHHHHHHHHHTTC-CSEEEE
T ss_pred CCC-CCccccCHHHhhccCeEEEEecCCCCcHHHHHHHHHHHHcCCCCcHHhEeeeecHHHHHHHHHHHhcCC-cceEEE
Confidence 641 1110000 11111 11 13567899999999999974 4455689999999999999877 589998
Q ss_pred Ee
Q 039636 116 DL 117 (129)
Q Consensus 116 ~~ 117 (129)
++
T Consensus 375 ~~ 376 (376)
T 1e3i_A 375 TF 376 (376)
T ss_dssp EC
T ss_pred eC
Confidence 74
|
| >1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=99.19 E-value=1.9e-10 Score=84.78 Aligned_cols=115 Identities=15% Similarity=0.125 Sum_probs=79.2
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-------------------------------------
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR------------------------------------- 42 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~------------------------------------- 42 (129)
+|+ +|++++++++|+++++ ++|++ ++|+++.+++.+.+++
T Consensus 208 ~Ga~~Vi~~~~~~~~~~~a~-~lGa~-~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~ 285 (398)
T 1kol_A 208 LGAAVVIVGDLNPARLAHAK-AQGFE-IADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNS 285 (398)
T ss_dssp TTCSEEEEEESCHHHHHHHH-HTTCE-EEETTSSSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHH
T ss_pred CCCCeEEEEcCCHHHHHHHH-HcCCc-EEccCCcchHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHH
Confidence 588 7999999999999998 99997 7887651224443322
Q ss_pred --------ccEEEecCC-CCCC-----------CCCC--cceeccc-------chHHHHHHHHHHHHcCCce---eeeee
Q 039636 43 --------GQNARCSAS-KHET-----------PREN--CSMWNDL-------TYSKFLDVVLPLIREGKIV---YVEDI 90 (129)
Q Consensus 43 --------G~~v~~G~~-~~~~-----------~~~~--~l~~~~~-------~~~~~~~~~~~~~~~g~i~---~~~~~ 90 (129)
|+++.+|.. .... ...+ .++.++. ...+.++++++++.+|.|+ +.+..
T Consensus 286 ~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~g~l~~~~~~i~~ 365 (398)
T 1kol_A 286 LMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTPVMKYNRALMQAIMWDRINIAEVVGVQ 365 (398)
T ss_dssp HHHHEEEEEEEEECSCCCSCCTTCSSHHHHTTCCCCCHHHHHHTTCEEEESSCCHHHHHHHHHHHHHTTSCCHHHHHTEE
T ss_pred HHHHHhcCCEEEEeccccCCcccccccccccccccccHHHHhhcccEEEecccChHHHHHHHHHHHHcCCCCCccceeEE
Confidence 555555542 1100 0000 1111111 2456778999999999998 34556
Q ss_pred ecCcccHHHHHHHHHcCCccceEEEEeC
Q 039636 91 VEGLENAPAALLGLFSGRNVGKQALDLD 118 (129)
Q Consensus 91 ~~~l~~~~~a~~~~~~~~~~Gkvvv~~~ 118 (129)
+|+|+++++||+.+.+++. ||+||+++
T Consensus 366 ~~~l~~~~~A~~~~~~~~~-gKvvi~~~ 392 (398)
T 1kol_A 366 VISLDDAPRGYGEFDAGVP-KKFVIDPH 392 (398)
T ss_dssp EECGGGHHHHHHHHHHTCS-CEEEECTT
T ss_pred EEcHHHHHHHHHHHhCCCc-eEEEEEeC
Confidence 7899999999999999887 99999874
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... | Back alignment and structure |
|---|
Probab=99.19 E-value=2.3e-10 Score=83.71 Aligned_cols=115 Identities=13% Similarity=0.137 Sum_probs=80.7
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCC-cccHHHHhcc------------------------------ccEEEe
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKE-EQDLVTALKR------------------------------GQNARC 48 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~-~~~~~~~v~~------------------------------G~~v~~ 48 (129)
+|+ +|++++++++++++++ ++|+++++|+++ .+++.+.+++ |+++.+
T Consensus 214 ~Ga~~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 214 AGAARIIGVDINKDKFAKAK-EVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp TTCSEEEEECSCGGGHHHHH-HTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEEC
T ss_pred cCCCeEEEEcCCHHHHHHHH-HhCCceEecccccchhHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCcEEEEe
Confidence 488 8999999999999998 999999999863 1345554432 477777
Q ss_pred cCCCCC-CCC-C-Ccceec-cc--------chHHHHHHHHHHHHcCCcee--eeeeecCcccHHHHHHHHHcCCccceEE
Q 039636 49 SASKHE-TPR-E-NCSMWN-DL--------TYSKFLDVVLPLIREGKIVY--VEDIVEGLENAPAALLGLFSGRNVGKQA 114 (129)
Q Consensus 49 G~~~~~-~~~-~-~~l~~~-~~--------~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~Gkvv 114 (129)
|..... ... . ..++.+ .+ ...+.++++++++.+|.+++ .+..+|||+++++||+.+.+++. +|+|
T Consensus 293 G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~Kvv 371 (374)
T 2jhf_A 293 GVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGES-IRTI 371 (374)
T ss_dssp SCCCTTCCEEECTHHHHTTCEEEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEE
T ss_pred ccCCCCCccccCHHHHhcCCeEEEeccCCCChHHHHHHHHHHHHcCCCCchhheEEEEeHHHHHHHHHHHHCCCc-ceEE
Confidence 752211 110 0 011111 11 12567899999999999975 44556899999999999998774 7999
Q ss_pred EEe
Q 039636 115 LDL 117 (129)
Q Consensus 115 v~~ 117 (129)
|++
T Consensus 372 i~~ 374 (374)
T 2jhf_A 372 LTF 374 (374)
T ss_dssp EEC
T ss_pred EeC
Confidence 874
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=1.5e-10 Score=84.66 Aligned_cols=115 Identities=13% Similarity=0.144 Sum_probs=80.8
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCC-cccHHHHhcc------------------------------ccEEEe
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKE-EQDLVTALKR------------------------------GQNARC 48 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~-~~~~~~~v~~------------------------------G~~v~~ 48 (129)
+|+ +|++++++++|+++++ ++|+++++|+++ ..++.+.+++ |+++.+
T Consensus 213 ~Ga~~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 213 AGASRIIGVDINKDKFARAK-EFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp HTCSEEEEECSCGGGHHHHH-HHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEEC
T ss_pred cCCCeEEEEcCCHHHHHHHH-HcCCceEeccccccccHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHhhccCCcEEEEE
Confidence 378 8999999999999998 999999999863 1345554432 577777
Q ss_pred cCCCCC-CCC-C-Ccceec-cc--------chHHHHHHHHHHHHcCCcee--eeeeecCcccHHHHHHHHHcCCccceEE
Q 039636 49 SASKHE-TPR-E-NCSMWN-DL--------TYSKFLDVVLPLIREGKIVY--VEDIVEGLENAPAALLGLFSGRNVGKQA 114 (129)
Q Consensus 49 G~~~~~-~~~-~-~~l~~~-~~--------~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~Gkvv 114 (129)
|..... ... . ..++.+ .+ ...+.++++++++.+|.+++ .+..+|||+++++||+.+.+++. +|+|
T Consensus 292 G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvv 370 (373)
T 2fzw_A 292 GVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKS-IRTV 370 (373)
T ss_dssp SCCCTTCCEEECTHHHHTTCEEEECSGGGCCHHHHHHHHHHHHHTTSSCSGGGEEEEEEGGGHHHHHHHHHHTCC-SEEE
T ss_pred ecCCCCceeeeCHHHHhcCCEEEEeccCCCCcHHHHHHHHHHHHcCCCCchheEeEEeeHHHHHHHHHHHhCCCc-ceEE
Confidence 752211 100 0 011111 11 13567899999999999974 45566899999999999998875 7999
Q ss_pred EEe
Q 039636 115 LDL 117 (129)
Q Consensus 115 v~~ 117 (129)
|++
T Consensus 371 i~~ 373 (373)
T 2fzw_A 371 VKI 373 (373)
T ss_dssp EEC
T ss_pred EeC
Confidence 874
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=2.2e-10 Score=83.74 Aligned_cols=115 Identities=13% Similarity=0.134 Sum_probs=80.0
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCC-cccHHHHhcc------------------------------ccEEEe
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKE-EQDLVTALKR------------------------------GQNARC 48 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~-~~~~~~~v~~------------------------------G~~v~~ 48 (129)
+|+ +|++++++++|+++++ ++|+++++|+++ .+++.+.+++ |+++.+
T Consensus 214 ~Ga~~Vi~~~~~~~~~~~a~-~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 214 AGASRIIGVGTHKDKFPKAI-ELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp HTCSEEEEECSCGGGHHHHH-HTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEEC
T ss_pred cCCCeEEEECCCHHHHHHHH-HcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHhcCCCEEEEE
Confidence 378 8999999999999998 999999999863 1346555442 577777
Q ss_pred cCCCCC-CCC-CC-cceec-cc-------chHHHHHHHHHHHHcCCcee--eeeeecCcccHHHHHHHHHcCCccceEEE
Q 039636 49 SASKHE-TPR-EN-CSMWN-DL-------TYSKFLDVVLPLIREGKIVY--VEDIVEGLENAPAALLGLFSGRNVGKQAL 115 (129)
Q Consensus 49 G~~~~~-~~~-~~-~l~~~-~~-------~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~Gkvvv 115 (129)
|..... ... .. .++.+ .+ ...+.++++++++.+|.+++ .+..+|||+++++||+.+.+++. +|+||
T Consensus 293 G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi 371 (373)
T 1p0f_A 293 GLASPNERLPLDPLLLLTGRSLKGSVFGGFKGEEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQG-VRSIM 371 (373)
T ss_dssp CCCCTTCCEEECTHHHHTTCEEEECSGGGCCGGGHHHHHHHHHTTSSCGGGGEEEEECGGGHHHHHHHTTTSSC-SEEEE
T ss_pred ccCCCCCccccCHHHhccCceEEeeccCCcCHHHHHHHHHHHHcCCCCchheEEEEeeHHHHHHHHHHHHCCCc-ceEEE
Confidence 752211 100 00 11111 11 11257899999999999874 45566899999999999988774 89998
Q ss_pred Ee
Q 039636 116 DL 117 (129)
Q Consensus 116 ~~ 117 (129)
++
T Consensus 372 ~~ 373 (373)
T 1p0f_A 372 IY 373 (373)
T ss_dssp EC
T ss_pred eC
Confidence 74
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.11 E-value=9e-11 Score=86.57 Aligned_cols=115 Identities=12% Similarity=0.146 Sum_probs=79.6
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCcccH-HHHhcc------------------------------------
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDL-VTALKR------------------------------------ 42 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~-~~~v~~------------------------------------ 42 (129)
+|+ +|++++++++++++++ ++|++ ++|+++ .++ .+.+++
T Consensus 208 ~Ga~~Vi~~~~~~~~~~~a~-~lGa~-~i~~~~-~~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~ 284 (398)
T 2dph_A 208 LGAACVIVGDQNPERLKLLS-DAGFE-TIDLRN-SAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNS 284 (398)
T ss_dssp HTCSEEEEEESCHHHHHHHH-TTTCE-EEETTS-SSCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHH
T ss_pred cCCCEEEEEcCCHHHHHHHH-HcCCc-EEcCCC-cchHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHH
Confidence 378 9999999999999998 99996 888876 443 443332
Q ss_pred --------ccEEEecCCC-CC----------CC-CCC--cceeccc-------chHHHHHHHHHHHHcCCce--e--eee
Q 039636 43 --------GQNARCSASK-HE----------TP-REN--CSMWNDL-------TYSKFLDVVLPLIREGKIV--Y--VED 89 (129)
Q Consensus 43 --------G~~v~~G~~~-~~----------~~-~~~--~l~~~~~-------~~~~~~~~~~~~~~~g~i~--~--~~~ 89 (129)
|+++.+|... .. .. ..+ .++.++. ...+.++++++++.+|.|+ + .+.
T Consensus 285 ~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~~~~i~ 364 (398)
T 2dph_A 285 LFDVVRAGGAIGIPGIYVGSDPDPVNKDAGSGRLHLDFGKMWTKSIRIMTGMAPVTNYNRHLTEAILWDQMPYLSKVMNI 364 (398)
T ss_dssp HHHHEEEEEEEECCSCCCSCCSSCSSHHHHTTEEEEEHHHHHHTTCEEECSSCCGGGTHHHHHHHHHTTCCHHHHHHHCE
T ss_pred HHHHHhcCCEEEEeccccccccccccccccCCcccccHHHHhhcCCEEEEeccCcHHHHHHHHHHHHcCCCCccchhhEE
Confidence 4555554321 00 00 000 1111211 2345688999999999998 6 445
Q ss_pred eecCcccHHHHHHHHHcCCccceEEEEeCC
Q 039636 90 IVEGLENAPAALLGLFSGRNVGKQALDLDS 119 (129)
Q Consensus 90 ~~~~l~~~~~a~~~~~~~~~~Gkvvv~~~~ 119 (129)
.+|+|+++++||+.+.+++. ||+||+++.
T Consensus 365 ~~~~l~~~~~A~~~~~~~~~-gKvvv~~~~ 393 (398)
T 2dph_A 365 EVITLDQAPDGYAKFDKGSP-AKFVIDPHG 393 (398)
T ss_dssp EEECSTTHHHHHHHHHTTCS-CEEEECTTS
T ss_pred EEEcHHHHHHHHHHHhcCCc-eEEEEecCc
Confidence 66899999999999999888 999998753
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=5.8e-10 Score=97.14 Aligned_cols=119 Identities=18% Similarity=0.178 Sum_probs=85.5
Q ss_pred CCcEEEEEeCChHHHHHHHHh---cCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEe
Q 039636 1 MGCYVVGSAGSKEKIERLKNK---FAFDDAFNYKEEQDLVTALKR-----------------------------GQNARC 48 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~---lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~ 48 (129)
+||+||+|+++++|++++++. +|+++++|+++ .++.+.+++ |+++.+
T Consensus 1691 ~Ga~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~-~~~~~~i~~~t~g~GvDvVld~~g~~~l~~~l~~L~~~Gr~V~i 1769 (2512)
T 2vz8_A 1691 RGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRD-TSFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFLEI 1769 (2512)
T ss_dssp TTCEEEEEESCHHHHHHHHHHCTTCCSTTEEESSS-SHHHHHHHHTTTSCCEEEEEECCCHHHHHHHHTTEEEEEEEEEC
T ss_pred cCCEEEEEeCChhhhHHHHhhcCCCCceEEecCCC-HHHHHHHHHhcCCCCceEEEECCCchHHHHHHHhcCCCcEEEEe
Confidence 589999999999999999842 68999999987 777776643 788877
Q ss_pred cCC---CCCCC-C----CC-cceecc--------c-chHHHHHHHHHHHHcCCceeeeeeecCcccHHHHHHHHHcCCcc
Q 039636 49 SAS---KHETP-R----EN-CSMWND--------L-TYSKFLDVVLPLIREGKIVYVEDIVEGLENAPAALLGLFSGRNV 110 (129)
Q Consensus 49 G~~---~~~~~-~----~~-~l~~~~--------~-~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~ 110 (129)
|.. ..... . ++ .+.... . ...+.++.+.+++.+|.++|.+..+||++++++|++.+.+++..
T Consensus 1770 G~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~l~~l~~~~~~g~l~p~i~~~f~l~ei~eA~~~l~~g~~~ 1849 (2512)
T 2vz8_A 1770 GKFDLSNNHALGMAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGVVQPLKCTVFPRTKVEAAFRYMAQGKHI 1849 (2512)
T ss_dssp CCHHHHTTCEEEGGGGGGCCEEEECCGGGTTSSCCHHHHHHHHHHHHHHTTTCSCCCCEEEEESSTHHHHHHHHHTTCCS
T ss_pred ecccccccCcccccccccCCcEEEeeHHHHhhhCHHHHHHHHHHHHHHHHcCCcCCCcceEecHHHHHHHHHhhhccCcc
Confidence 751 10000 0 11 111100 0 23445555556667889998877789999999999999999999
Q ss_pred ceEEEEeCCC
Q 039636 111 GKQALDLDSC 120 (129)
Q Consensus 111 Gkvvv~~~~~ 120 (129)
||+|+++++.
T Consensus 1850 GKvVi~~~~~ 1859 (2512)
T 2vz8_A 1850 GKVVIQVREE 1859 (2512)
T ss_dssp SEEEEECSCC
T ss_pred ceEEEECCCc
Confidence 9999999753
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=8e-10 Score=80.61 Aligned_cols=116 Identities=8% Similarity=-0.062 Sum_probs=77.4
Q ss_pred CCcEEEEEeCCh---HHHHHHHHhcCCCEEEe--------------------CCCccc-H-HHHhcc----ccEEEecCC
Q 039636 1 MGCYVVGSAGSK---EKIERLKNKFAFDDAFN--------------------YKEEQD-L-VTALKR----GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~Vi~t~~s~---~k~~~~~~~lGad~vi~--------------------~~~~~~-~-~~~v~~----G~~v~~G~~ 51 (129)
+|++|+++++++ ++.++++ ++|++++ | ...... + ...+.. |+++.+|..
T Consensus 203 ~Ga~Vi~~~~~~~~~~~~~~~~-~~ga~~v-~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~ 280 (366)
T 2cdc_A 203 YGLEVWMANRREPTEVEQTVIE-ETKTNYY-NSSNGYDKLKDSVGKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFS 280 (366)
T ss_dssp HTCEEEEEESSCCCHHHHHHHH-HHTCEEE-ECTTCSHHHHHHHCCEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCC
T ss_pred CCCEEEEEeCCccchHHHHHHH-HhCCcee-chHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecC
Confidence 388999999998 8888887 8898776 5 111011 1 222211 888888763
Q ss_pred CCCCCCCC--c---ceeccc-------chHHHHHHHHHHHHcCC------ceeeeeeecCcccHHHHHHHH-HcCCccce
Q 039636 52 KHETPREN--C---SMWNDL-------TYSKFLDVVLPLIREGK------IVYVEDIVEGLENAPAALLGL-FSGRNVGK 112 (129)
Q Consensus 52 ~~~~~~~~--~---l~~~~~-------~~~~~~~~~~~~~~~g~------i~~~~~~~~~l~~~~~a~~~~-~~~~~~Gk 112 (129)
.......+ . ++.++. ...+.++++++++.+|. +++.+..+|+|+++++||+.+ .+++..||
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l~~~~~A~~~l~~~~~~~gK 360 (366)
T 2cdc_A 281 TSGSVPLDYKTLQEIVHTNKTIIGLVNGQKPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLREKEHGEIK 360 (366)
T ss_dssp CSCEEEEEHHHHHHHHHTTCEEEECCCCCHHHHHHHHHHHHHHHHHSHHHHTTSEEEEEETTCHHHHHHHHHCCCTTCCE
T ss_pred CCCccccChhhhHHHHhcCcEEEEecCCCHHHHHHHHHHHHcCCCCcccchhhcEEEEEcHHHHHHHHHHHhhhcCCceE
Confidence 22101101 2 333322 33678899999999999 556666679999999999994 33667899
Q ss_pred EEEEeC
Q 039636 113 QALDLD 118 (129)
Q Consensus 113 vvv~~~ 118 (129)
+||+++
T Consensus 361 vvi~~~ 366 (366)
T 2cdc_A 361 IRILWE 366 (366)
T ss_dssp EEEECC
T ss_pred EEEecC
Confidence 999863
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=97.97 E-value=4.7e-05 Score=50.50 Aligned_cols=87 Identities=16% Similarity=0.235 Sum_probs=58.2
Q ss_pred CcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCCC
Q 039636 2 GCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSASK 52 (129)
Q Consensus 2 Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~~ 52 (129)
|++|+++++++++.+.++ ++|+++++|+++ .++.+.+.+ |+++.+|...
T Consensus 63 G~~V~~~~~~~~~~~~~~-~~g~~~~~d~~~-~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~ 140 (198)
T 1pqw_A 63 GARIYTTAGSDAKREMLS-RLGVEYVGDSRS-VDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKD 140 (198)
T ss_dssp TCEEEEEESSHHHHHHHH-TTCCSEEEETTC-STHHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGG
T ss_pred CCEEEEEeCCHHHHHHHH-HcCCCEEeeCCc-HHHHHHHHHHhCCCCCeEEEECCchHHHHHHHHHhccCCEEEEEcCCC
Confidence 789999999999888887 899999999876 555554432 8888887622
Q ss_pred C--CC-CC-----CC-cceec--------cc-chHHHHHHHHHHHHcCCceeeeee
Q 039636 53 H--ET-PR-----EN-CSMWN--------DL-TYSKFLDVVLPLIREGKIVYVEDI 90 (129)
Q Consensus 53 ~--~~-~~-----~~-~l~~~--------~~-~~~~~~~~~~~~~~~g~i~~~~~~ 90 (129)
. .. .. ++ .+... .. ...+.++++++++.+|+|+|.+..
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~ 196 (198)
T 1pqw_A 141 VYADASLGLAALAKSASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVLPVT 196 (198)
T ss_dssp GTTTCEEEGGGGTTTCEEEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCCCCC
T ss_pred CcCcCcCChhHhcCCcEEEEEehHHhhccCHHHHHHHHHHHHHHHHcCCccCCCCC
Confidence 1 11 00 01 11100 11 225678999999999999887543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 129 | |||
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 99.07 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 99.01 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 98.97 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 98.96 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 98.9 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 98.83 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 98.82 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 98.78 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 98.75 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 98.66 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 98.64 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 98.63 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 98.6 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 98.59 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 98.55 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 98.47 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 98.45 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 98.44 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 98.37 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 98.27 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 98.24 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 98.24 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 98.21 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 98.18 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 98.14 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 98.1 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 98.04 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 97.88 |
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.07 E-value=2.1e-10 Score=74.45 Aligned_cols=86 Identities=19% Similarity=0.286 Sum_probs=63.5
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSAS 51 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~ 51 (129)
+|++|++++++++|.++++ ++|+++++++++ +++.+.+++ |+++.+|..
T Consensus 49 ~g~~vi~~~~~~~~~~~l~-~~Ga~~vi~~~~-~~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~G~~ 126 (183)
T d1pqwa_ 49 IGARIYTTAGSDAKREMLS-RLGVEYVGDSRS-VDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKK 126 (183)
T ss_dssp HTCEEEEEESSHHHHHHHH-TTCCSEEEETTC-STHHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCG
T ss_pred ccccceeeecccccccccc-cccccccccCCc-cCHHHHHHHHhCCCCEEEEEecccchHHHHHHHHhcCCCEEEEEccC
Confidence 3899999999999999998 999999999988 889888866 888888762
Q ss_pred CCCCCC--------CC-cceeccc---------chHHHHHHHHHHHHcCCceeee
Q 039636 52 KHETPR--------EN-CSMWNDL---------TYSKFLDVVLPLIREGKIVYVE 88 (129)
Q Consensus 52 ~~~~~~--------~~-~l~~~~~---------~~~~~~~~~~~~~~~g~i~~~~ 88 (129)
+..... ++ .+..... ..++.++++++++++|+|+|.+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~G~i~p~P 181 (183)
T d1pqwa_ 127 DVYADASLGLAALAKSASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVLP 181 (183)
T ss_dssp GGTTTCEEEGGGGTTTCEEEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred CCCCCcccchHHHhCCcEEEEEEccceeccCHHHHHHHHHHHHHHHHCCCCceeC
Confidence 111100 11 1111111 3467899999999999999863
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=99.01 E-value=1.4e-09 Score=70.16 Aligned_cols=40 Identities=33% Similarity=0.546 Sum_probs=37.0
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR 42 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~ 42 (129)
+||+||+++++++|.++++ ++|++++||+++ +++.+.+++
T Consensus 52 ~Ga~Vi~~~~s~~k~~~~~-~lGa~~vi~~~~-~d~~~~v~~ 91 (179)
T d1qora2 52 LGAKLIGTVGTAQKAQSAL-KAGAWQVINYRE-EDLVERLKE 91 (179)
T ss_dssp HTCEEEEEESSHHHHHHHH-HHTCSEEEETTT-SCHHHHHHH
T ss_pred hCCeEeecccchHHHHHHH-hcCCeEEEECCC-CCHHHHHHH
Confidence 3899999999999999998 999999999998 899998876
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.97 E-value=6.6e-10 Score=71.69 Aligned_cols=40 Identities=23% Similarity=0.446 Sum_probs=36.4
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR 42 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~ 42 (129)
+|++||+++++++|.+.++ ++|+++++|+++ .++.+.+++
T Consensus 52 ~G~~vi~~~~~~~~~~~~~-~~Ga~~vi~~~~-~~~~~~i~~ 91 (174)
T d1yb5a2 52 YGLKILGTAGTEEGQKIVL-QNGAHEVFNHRE-VNYIDKIKK 91 (174)
T ss_dssp TTCEEEEEESSHHHHHHHH-HTTCSEEEETTS-TTHHHHHHH
T ss_pred cCccccccccccccccccc-ccCccccccccc-ccHHHHhhh
Confidence 5899999999999999998 999999999998 889888765
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.96 E-value=8.9e-10 Score=70.76 Aligned_cols=84 Identities=21% Similarity=0.105 Sum_probs=57.6
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc---------------------------ccEEEecCCCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR---------------------------GQNARCSASKH 53 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~---------------------------G~~v~~G~~~~ 53 (129)
+|++||+++++++|+++++ ++|+|+++++.+..++.+...+ |+++.+|....
T Consensus 50 ~G~~vi~~~~~~~k~~~a~-~lGa~~~i~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~ 128 (168)
T d1piwa2 50 MGAETYVISRSSRKREDAM-KMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ 128 (168)
T ss_dssp HTCEEEEEESSSTTHHHHH-HHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS
T ss_pred ccccccccccchhHHHHhh-ccCCcEEeeccchHHHHHhhhcccceEEEEecCCccchHHHHHHHhhccceEEEeccccc
Confidence 4899999999999999998 9999999998752456555444 66776665221
Q ss_pred CCC-CCCcceeccc-------chHHHHHHHHHHHHcCCce
Q 039636 54 ETP-RENCSMWNDL-------TYSKFLDVVLPLIREGKIV 85 (129)
Q Consensus 54 ~~~-~~~~l~~~~~-------~~~~~~~~~~~~~~~g~i~ 85 (129)
... ....++.++. ...+.++++++++++|+|+
T Consensus 129 ~~~~~~~~~~~k~~~i~Gs~~g~~~~~~e~l~li~~gkIk 168 (168)
T d1piwa2 129 HEMLSLKPYGLKAVSISYSALGSIKELNQLLKLVSEKDIK 168 (168)
T ss_dssp SCCEEECGGGCBSCEEEECCCCCHHHHHHHHHHHHHTTCC
T ss_pred cccccHHHHHhCCcEEEEEeeCCHHHHHHHHHHHHhCCCC
Confidence 111 0112333322 3567789999999999875
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=98.90 E-value=3.5e-09 Score=68.70 Aligned_cols=40 Identities=50% Similarity=0.793 Sum_probs=34.4
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR 42 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~ 42 (129)
+||+||+++++++|.++++ ++|++++|++++ +++.+.+.+
T Consensus 53 ~Ga~vi~~~~~~~~~~~~~-~~Ga~~vi~~~~-~~~~~~~~~ 92 (182)
T d1v3va2 53 KGCKVVGAAGSDEKIAYLK-QIGFDAAFNYKT-VNSLEEALK 92 (182)
T ss_dssp TTCEEEEEESSHHHHHHHH-HTTCSEEEETTS-CSCHHHHHH
T ss_pred cCCEEEEeCCCHHHHHHHH-hhhhhhhccccc-ccHHHHHHH
Confidence 5899999999999999998 999999999988 666655543
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.83 E-value=3.7e-09 Score=67.49 Aligned_cols=80 Identities=24% Similarity=0.226 Sum_probs=55.4
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc----------------------------ccEEEecCCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR----------------------------GQNARCSASK 52 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~----------------------------G~~v~~G~~~ 52 (129)
+|++|++++++++|+++++ ++|+++++|+++ +++.+.+.+ |+++.+|...
T Consensus 50 ~G~~Vi~~~~~~~~~~~a~-~~Ga~~~i~~~~-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~~ 127 (166)
T d1llua2 50 MGLHVAAIDIDDAKLELAR-KLGASLTVNARQ-EDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPP 127 (166)
T ss_dssp TTCEEEEEESCHHHHHHHH-HTTCSEEEETTT-SCHHHHHHHHHSSEEEEEECCSCHHHHHHHHTTEEEEEEEEECCCCS
T ss_pred cCCccceecchhhHHHhhh-ccCccccccccc-hhHHHHHHHhhcCCcccccccccchHHHHHHHHhcCCcEEEEEEecC
Confidence 4899999999999999998 999999999988 777776654 7777777522
Q ss_pred CCCCC-CCcceeccc-------chHHHHHHHHHHHHcC
Q 039636 53 HETPR-ENCSMWNDL-------TYSKFLDVVLPLIREG 82 (129)
Q Consensus 53 ~~~~~-~~~l~~~~~-------~~~~~~~~~~~~~~~g 82 (129)
...+. .+.++.++. ...+.++++++++++|
T Consensus 128 ~~~~~~~~~~~~k~~~i~Gs~~~~~~d~~e~l~l~~~G 165 (166)
T d1llua2 128 GDFPTPIFDVVLKGLHIAGSIVGTRADLQEALDFAGEG 165 (166)
T ss_dssp SEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTT
T ss_pred CCccCCHHHHHhCCcEEEEEeecCHHHHHHHHHHHHCc
Confidence 11100 012222222 3455678888888776
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.82 E-value=4.3e-09 Score=68.20 Aligned_cols=38 Identities=13% Similarity=0.270 Sum_probs=28.3
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhc
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALK 41 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~ 41 (129)
+|++||+++++++|.++++ ++|+++++||++ .+.+.++
T Consensus 55 ~Ga~Viat~~s~~k~~~~~-~lGa~~vi~~~~--~~~~~~~ 92 (176)
T d1xa0a2 55 RGYTVEASTGKAAEHDYLR-VLGAKEVLARED--VMAERIR 92 (176)
T ss_dssp TTCCEEEEESCTTCHHHHH-HTTCSEEEECC----------
T ss_pred cCCceEEecCchHHHHHHH-hcccceeeecch--hHHHHHH
Confidence 5899999999999999998 999999999875 3444433
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.78 E-value=6.7e-09 Score=66.18 Aligned_cols=40 Identities=30% Similarity=0.293 Sum_probs=35.1
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR 42 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~ 42 (129)
.|++|++++.+++|+++++ ++|+++++++++ +++.+.+++
T Consensus 50 ~g~~v~~~~~~~~r~~~~k-~~Ga~~~~~~~~-~~~~~~~~~ 89 (168)
T d1rjwa2 50 MGLNVVAVDIGDEKLELAK-ELGADLVVNPLK-EDAAKFMKE 89 (168)
T ss_dssp TTCEEEEECSCHHHHHHHH-HTTCSEEECTTT-SCHHHHHHH
T ss_pred CCCeEeccCCCHHHhhhhh-hcCcceeccccc-chhhhhccc
Confidence 4889999999999999998 999999999988 777776664
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=98.75 E-value=8.6e-10 Score=71.66 Aligned_cols=39 Identities=23% Similarity=0.274 Sum_probs=32.8
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhc
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALK 41 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~ 41 (129)
+||+||+++++++|.++++ ++|+|+++||++ .++.+.+.
T Consensus 55 ~Ga~Via~~~~~~k~~~~~-~lGad~vi~~~~-~~~~~~l~ 93 (177)
T d1o89a2 55 LGYQVVAVSGRESTHEYLK-SLGASRVLPRDE-FAESRPLE 93 (177)
T ss_dssp TTCCEEEEESCGGGHHHHH-HHTEEEEEEGGG-SSSCCSSC
T ss_pred cCCCeEEEecchhHHHHHH-hhcccccccccc-HHHHHHHH
Confidence 5999999999999999998 999999999976 55544443
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=98.66 E-value=6.7e-08 Score=62.07 Aligned_cols=80 Identities=24% Similarity=0.319 Sum_probs=55.6
Q ss_pred Cc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCC
Q 039636 2 GC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSAS 51 (129)
Q Consensus 2 Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~ 51 (129)
|+ +|++++.+++|+++++ ++|+++++|+++ +++.+++++ |+++.+|..
T Consensus 52 g~~~v~~~~~~~~k~~~a~-~~Ga~~~i~~~~-~~~~~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~ 129 (174)
T d1f8fa2 52 GASIIIAVDIVESRLELAK-QLGATHVINSKT-QDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAP 129 (174)
T ss_dssp TCSEEEEEESCHHHHHHHH-HHTCSEEEETTT-SCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCC
T ss_pred ccceeeeeccHHHHHHHHH-HcCCeEEEeCCC-cCHHHHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCceEEEEEeec
Confidence 66 5677788999999998 999999999988 788888765 888888762
Q ss_pred CCC-CCCCC--cceeccc----------chHHHHHHHHHHHHcCC
Q 039636 52 KHE-TPREN--CSMWNDL----------TYSKFLDVVLPLIREGK 83 (129)
Q Consensus 52 ~~~-~~~~~--~l~~~~~----------~~~~~~~~~~~~~~~g~ 83 (129)
... ....+ .++.++. ..++.++++++|+++|+
T Consensus 130 ~~~~~~~~~~~~~~~k~~~i~Gs~~g~~~~~~~~~~~~~l~~~Gk 174 (174)
T d1f8fa2 130 QLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGK 174 (174)
T ss_dssp STTCCCCCCHHHHHHTTCEEEECSGGGSCHHHHHHHHHHHHHTTS
T ss_pred CCCcccccCHHHHHHCCCEEEEEEecCCChHHHHHHHHHHHHcCC
Confidence 211 11111 2222221 23567888899988875
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=98.64 E-value=3.9e-08 Score=62.78 Aligned_cols=37 Identities=32% Similarity=0.376 Sum_probs=31.4
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHH
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTA 39 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~ 39 (129)
+||++|+++++++|+++++ ++|+|+++|+.+ ++....
T Consensus 53 ~Ga~~i~~~~~~~~~~~a~-~lGad~~i~~~~-~~~~~~ 89 (168)
T d1uufa2 53 MGAHVVAFTTSEAKREAAK-ALGADEVVNSRN-ADEMAA 89 (168)
T ss_dssp TTCEEEEEESSGGGHHHHH-HHTCSEEEETTC-HHHHHT
T ss_pred ccccchhhccchhHHHHHh-ccCCcEEEECch-hhHHHH
Confidence 5899999999999999998 999999999987 554443
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.63 E-value=8.1e-08 Score=62.40 Aligned_cols=41 Identities=39% Similarity=0.713 Sum_probs=32.5
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR 42 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~ 42 (129)
+|| +|+++++++++...+.+.+|+|+++|+++ +++.+.+++
T Consensus 54 ~Ga~~vi~~~~~~e~~~~l~~~~gad~vi~~~~-~~~~~~~~~ 95 (187)
T d1vj1a2 54 LGCSRVVGICGTQEKCLFLTSELGFDAAVNYKT-GNVAEQLRE 95 (187)
T ss_dssp TTCSEEEEEESSHHHHHHHHHHSCCSEEEETTS-SCHHHHHHH
T ss_pred cCCcceecccchHHHHhhhhhcccceEEeeccc-hhHHHHHHH
Confidence 477 57777778777665555899999999998 888887776
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=98.60 E-value=8.6e-08 Score=61.36 Aligned_cols=80 Identities=11% Similarity=0.077 Sum_probs=51.9
Q ss_pred Cc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc-----------------------------ccEEEecCC
Q 039636 2 GC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR-----------------------------GQNARCSAS 51 (129)
Q Consensus 2 Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~-----------------------------G~~v~~G~~ 51 (129)
|+ +|++++.+++|+++++ ++|+++++|+++ +++.+.++. |+++.+|..
T Consensus 56 g~~~vv~~~~~~~k~~~~~-~~ga~~~i~~~~-~~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~ 133 (172)
T d1h2ba2 56 TPATVIALDVKEEKLKLAE-RLGADHVVDARR-DPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYG 133 (172)
T ss_dssp CCCEEEEEESSHHHHHHHH-HTTCSEEEETTS-CHHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCCS
T ss_pred cCcccccccchhHHHHHHh-hcccceeecCcc-cHHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeCc
Confidence 55 7888899999999998 999999999987 554443332 788887752
Q ss_pred CCCCCCCCcceeccc-------chHHHHHHHHHHHHcCC
Q 039636 52 KHETPRENCSMWNDL-------TYSKFLDVVLPLIREGK 83 (129)
Q Consensus 52 ~~~~~~~~~l~~~~~-------~~~~~~~~~~~~~~~g~ 83 (129)
.....+...++.++. ...+.++++++|+.+|+
T Consensus 134 ~~~~~~~~~l~~k~~~i~Gs~~~~~~d~~~~l~l~~~GK 172 (172)
T d1h2ba2 134 GELRFPTIRVISSEVSFEGSLVGNYVELHELVTLALQGK 172 (172)
T ss_dssp SCCCCCHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTS
T ss_pred ccccCCHHHHHhCCcEEEEEEecCHHHHHHHHHHHHcCC
Confidence 111111112232222 34556788888888774
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.59 E-value=6.5e-08 Score=61.86 Aligned_cols=36 Identities=19% Similarity=0.232 Sum_probs=30.7
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHH
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVT 38 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~ 38 (129)
+|+ +|++++.+++|+++++ ++|+++++++.+ ++..+
T Consensus 49 ~G~~~Vi~~d~~~~rl~~a~-~~Ga~~~~~~~~-~~~~~ 85 (171)
T d1pl8a2 49 MGAAQVVVTDLSATRLSKAK-EIGADLVLQISK-ESPQE 85 (171)
T ss_dssp TTCSEEEEEESCHHHHHHHH-HTTCSEEEECSS-CCHHH
T ss_pred cCCceEEeccCCHHHHHHHH-HhCCcccccccc-ccccc
Confidence 488 8999999999999998 999999999876 55443
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=98.55 E-value=2.1e-07 Score=59.25 Aligned_cols=39 Identities=23% Similarity=0.331 Sum_probs=33.5
Q ss_pred C-cEEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc
Q 039636 2 G-CYVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR 42 (129)
Q Consensus 2 G-a~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~ 42 (129)
| .+|++++.+++|+++++ ++|+++++|+++ +++.+.+++
T Consensus 52 g~~~V~~~~~~~~~~~~~~-~~Ga~~~i~~~~-~~~~~~~~~ 91 (170)
T d1jvba2 52 SGATIIGVDVREEAVEAAK-RAGADYVINASM-QDPLAEIRR 91 (170)
T ss_dssp TCCEEEEEESSHHHHHHHH-HHTCSEEEETTT-SCHHHHHHH
T ss_pred ccccccccccchhhHHHHH-HcCCceeeccCC-cCHHHHHHH
Confidence 5 48999999999999998 999999999987 777777665
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=98.47 E-value=2.6e-07 Score=59.33 Aligned_cols=40 Identities=20% Similarity=0.359 Sum_probs=35.0
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR 42 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~ 42 (129)
+|+ +|++++.+++|+++++ ++|+++++|+++ +++.+.+++
T Consensus 50 ~Ga~~Vi~~d~~~~r~~~a~-~lGa~~~i~~~~-~~~~~~v~~ 90 (174)
T d1jqba2 50 RGAGRIIGVGSRPICVEAAK-FYGATDILNYKN-GHIEDQVMK 90 (174)
T ss_dssp TTCSCEEEECCCHHHHHHHH-HHTCSEEECGGG-SCHHHHHHH
T ss_pred ccccccccccchhhhHHHHH-hhCccccccccc-hhHHHHHHH
Confidence 477 7999999999999998 999999999987 778777766
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=98.45 E-value=1.3e-08 Score=65.41 Aligned_cols=31 Identities=26% Similarity=0.446 Sum_probs=28.1
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKE 32 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~ 32 (129)
+||+||+|+++++|.++++ ++|+|+++++++
T Consensus 47 ~Ga~Viat~~s~~k~~~~~-~lGad~vi~~~~ 77 (167)
T d1tt7a2 47 RGYDVVASTGNREAADYLK-QLGASEVISRED 77 (167)
T ss_dssp HTCCEEEEESSSSTHHHHH-HHTCSEEEEHHH
T ss_pred cCCceEEEecCHHHHHHHH-hhcccceEeccc
Confidence 4899999999999999998 999999998753
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=98.44 E-value=7.5e-07 Score=57.28 Aligned_cols=36 Identities=22% Similarity=0.355 Sum_probs=31.1
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHH
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVT 38 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~ 38 (129)
+|| +|++++.+++|+++++ ++|+++++|+++ .++.+
T Consensus 51 ~Ga~~Vi~~~~~~~~~~~a~-~lGa~~vi~~~~-~~~~~ 87 (182)
T d1vj0a2 51 LGAENVIVIAGSPNRLKLAE-EIGADLTLNRRE-TSVEE 87 (182)
T ss_dssp TTBSEEEEEESCHHHHHHHH-HTTCSEEEETTT-SCHHH
T ss_pred cccccccccccccccccccc-cccceEEEeccc-cchHH
Confidence 588 8999999999999998 999999999987 55443
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=98.37 E-value=2.7e-07 Score=59.28 Aligned_cols=30 Identities=20% Similarity=0.429 Sum_probs=27.4
Q ss_pred Cc-EEEEEeCChHHHHHHHHhcCCCEEEeCCC
Q 039636 2 GC-YVVGSAGSKEKIERLKNKFAFDDAFNYKE 32 (129)
Q Consensus 2 Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~ 32 (129)
|+ +|++++++++|+++++ ++|+++++|+++
T Consensus 51 G~~~Vi~~d~~~~kl~~a~-~lGa~~~i~~~~ 81 (174)
T d1p0fa2 51 GASRIIGVGTHKDKFPKAI-ELGATECLNPKD 81 (174)
T ss_dssp TCSEEEEECSCGGGHHHHH-HTTCSEEECGGG
T ss_pred CCceeeccCChHHHHHHHH-HcCCcEEEcCCC
Confidence 66 8999999999999998 999999999876
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=98.27 E-value=1.1e-06 Score=55.75 Aligned_cols=30 Identities=27% Similarity=0.341 Sum_probs=26.5
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYK 31 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~ 31 (129)
+|++||+++.+++|+++++ ++|++.++++.
T Consensus 49 ~Ga~vi~v~~~~~r~~~a~-~~ga~~~~~~~ 78 (170)
T d1e3ja2 49 YGAFVVCTARSPRRLEVAK-NCGADVTLVVD 78 (170)
T ss_dssp TTCEEEEEESCHHHHHHHH-HTTCSEEEECC
T ss_pred hcccccccchHHHHHHHHH-HcCCcEEEecc
Confidence 5899999999999999998 99998877654
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=98.24 E-value=1.3e-06 Score=56.08 Aligned_cols=31 Identities=19% Similarity=0.339 Sum_probs=28.2
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCC
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKE 32 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~ 32 (129)
+|+ +||+++.+++|+++++ ++||+++||+++
T Consensus 52 ~G~~~Vi~vd~~~~kl~~Ak-~~GA~~~in~~~ 83 (176)
T d1d1ta2 52 AGASRIIGIDLNKDKFEKAM-AVGATECISPKD 83 (176)
T ss_dssp TTCSEEEEECSCGGGHHHHH-HHTCSEEECGGG
T ss_pred cCCceEEEecCcHHHHHHHH-hcCCcEEECccc
Confidence 475 8999999999999998 999999999876
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=98.24 E-value=3.6e-06 Score=54.81 Aligned_cols=40 Identities=15% Similarity=0.135 Sum_probs=34.1
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCcccHHHHhcc
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEEQDLVTALKR 42 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~~~~~~v~~ 42 (129)
+|+ +|++++.+++|++.++ ++|+++++++.+ .++.+.+.+
T Consensus 48 ~ga~~Vi~~d~~~~rl~~a~-~~Ga~~~~~~~~-~~~~~~i~~ 88 (195)
T d1kola2 48 LGAAVVIVGDLNPARLAHAK-AQGFEIADLSLD-TPLHEQIAA 88 (195)
T ss_dssp TTCSEEEEEESCHHHHHHHH-HTTCEEEETTSS-SCHHHHHHH
T ss_pred hcccceeeecccchhhHhhh-hccccEEEeCCC-cCHHHHHHH
Confidence 366 8999999999999998 999999999987 777766654
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=98.21 E-value=1.5e-06 Score=55.31 Aligned_cols=29 Identities=21% Similarity=0.256 Sum_probs=26.6
Q ss_pred cEEEEEeCChHHHHHHHHhcCCCEEEeCCC
Q 039636 3 CYVVGSAGSKEKIERLKNKFAFDDAFNYKE 32 (129)
Q Consensus 3 a~Vi~t~~s~~k~~~~~~~lGad~vi~~~~ 32 (129)
.+|++++++++|+++++ ++|||++||+++
T Consensus 54 ~~Vi~~~~~~~rl~~a~-~~GAd~~in~~~ 82 (175)
T d1cdoa2 54 KRIIAVDLNPDKFEKAK-VFGATDFVNPND 82 (175)
T ss_dssp SEEEEECSCGGGHHHHH-HTTCCEEECGGG
T ss_pred chheeecchHHHHHHHH-HcCCcEEEcCCC
Confidence 48999999999999998 999999999876
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=98.18 E-value=7.5e-07 Score=56.90 Aligned_cols=31 Identities=29% Similarity=0.390 Sum_probs=28.4
Q ss_pred CCcEEEEEeCChHHHHHHHHhcCCCEEEeCCC
Q 039636 1 MGCYVVGSAGSKEKIERLKNKFAFDDAFNYKE 32 (129)
Q Consensus 1 ~Ga~Vi~t~~s~~k~~~~~~~lGad~vi~~~~ 32 (129)
+||+||+++++++|++.++ ++|+++++|+.+
T Consensus 51 ~G~~vi~~~~~~~~~~~~~-~lGa~~~i~~~~ 81 (171)
T d1iz0a2 51 MGLRVLAAASRPEKLALPL-ALGAEEAATYAE 81 (171)
T ss_dssp TTCEEEEEESSGGGSHHHH-HTTCSEEEEGGG
T ss_pred ccccccccccccccccccc-ccccceeeehhh
Confidence 5899999999999999998 999999999865
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=98.14 E-value=5.1e-07 Score=58.55 Aligned_cols=31 Identities=10% Similarity=0.209 Sum_probs=24.1
Q ss_pred CCcEEEEEeCCh----HHHHHHHHhcCCCEEEeCCC
Q 039636 1 MGCYVVGSAGSK----EKIERLKNKFAFDDAFNYKE 32 (129)
Q Consensus 1 ~Ga~Vi~t~~s~----~k~~~~~~~lGad~vi~~~~ 32 (129)
+||+||++++++ ++.+.++ ++|+|+++++++
T Consensus 53 ~Ga~vI~~v~~~~~~~~~~~~~~-~lGad~vi~~~~ 87 (189)
T d1gu7a2 53 LNFNSISVIRDRPNLDEVVASLK-ELGATQVITEDQ 87 (189)
T ss_dssp HTCEEEEEECCCTTHHHHHHHHH-HHTCSEEEEHHH
T ss_pred cCCeEEEEEecccccchHHhhhh-hccccEEEeccc
Confidence 489999998654 3456676 999999998754
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=98.10 E-value=4.9e-06 Score=52.79 Aligned_cols=39 Identities=23% Similarity=0.380 Sum_probs=30.1
Q ss_pred Cc-EEEEEeCChHHHHHHHHhcCCCEEEeCCCcc-cHHHHhc
Q 039636 2 GC-YVVGSAGSKEKIERLKNKFAFDDAFNYKEEQ-DLVTALK 41 (129)
Q Consensus 2 Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~~~-~~~~~v~ 41 (129)
|+ +|++++++++|+++++ ++|+++++|+.+.. +..+.++
T Consensus 52 G~~~vi~~~~~~~k~~~ak-~lGa~~~i~~~~~~~~~~~~~~ 92 (176)
T d2fzwa2 52 GASRIIGVDINKDKFARAK-EFGATECINPQDFSKPIQEVLI 92 (176)
T ss_dssp TCSEEEEECSCGGGHHHHH-HHTCSEEECGGGCSSCHHHHHH
T ss_pred hcCceEEEcccHHHHHHHH-HhCCcEEEeCCchhhHHHHHHH
Confidence 65 7999999999999998 99999999986522 3444443
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=98.04 E-value=3e-06 Score=54.26 Aligned_cols=31 Identities=23% Similarity=0.329 Sum_probs=27.5
Q ss_pred CCc-EEEEEeCChHHHHHHHHhcCCCEEEeCCC
Q 039636 1 MGC-YVVGSAGSKEKIERLKNKFAFDDAFNYKE 32 (129)
Q Consensus 1 ~Ga-~Vi~t~~s~~k~~~~~~~lGad~vi~~~~ 32 (129)
+|| +|++++.+++|+++++ ++|+++++|++.
T Consensus 51 ~Ga~~Vi~~d~~~~r~~~a~-~~Ga~~~i~~~~ 82 (174)
T d1e3ia2 51 AGASRIIAIDINGEKFPKAK-ALGATDCLNPRE 82 (174)
T ss_dssp TTCSEEEEECSCGGGHHHHH-HTTCSEEECGGG
T ss_pred hCCceeeeeccchHHHHHHH-HhCCCcccCCcc
Confidence 477 7999999999999998 999999998764
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=97.88 E-value=3.4e-05 Score=48.93 Aligned_cols=30 Identities=20% Similarity=0.398 Sum_probs=26.8
Q ss_pred C-cEEEEEeCChHHHHHHHHhcCCCEEEeCCC
Q 039636 2 G-CYVVGSAGSKEKIERLKNKFAFDDAFNYKE 32 (129)
Q Consensus 2 G-a~Vi~t~~s~~k~~~~~~~lGad~vi~~~~ 32 (129)
| ++|++++++++|.++++ ++|+++++++.+
T Consensus 52 g~~~Vi~~~~~~~k~~~a~-~~Ga~~~i~~~~ 82 (176)
T d2jhfa2 52 GAARIIGVDINKDKFAKAK-EVGATECVNPQD 82 (176)
T ss_dssp TCSEEEEECSCGGGHHHHH-HTTCSEEECGGG
T ss_pred CCceEEeecCcHHHHHHHH-HhCCeeEEecCC
Confidence 5 49999999999999998 999999998765
|