Citrus Sinensis ID: 039678

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010-----
MAANAILFAGSHNRNELVLIHNHEEPKPWKSLDGQVCEICGDEIGKMANGDLFLACEECGFPVCRPCYEYERREGTQLCPQCKTRYKRIKGSPRVEGDADEEDIDDIEHEFNIEDENKIVHNENAKAEAMLHGKLSYGRGPNDDEYTPVDGEFPIQQKLSSSLHKRVHPYPDSGGAKETTDDWKLQQGNLVQETNGTKDSDTSMIDESRQPLSRKVPIATSKINPYRMVVAARLVIMVLFLQYRIMNPVNDAVGLWLTSVICEIWFGFSWILDQFPKWLPIQRETYLERLSIRYEREGEPNMLAPVDIFVTTVDPMKEPPLVTANTILSVLAMDYPVDKISCYISDDGASLLSFESLSETADFARKWVPFCKKYSIEPRAPEMYFSQKVDYLKDKVQPAFVKERRAMKREYEEFKVRMNALVAKSRMIPQDGWIMQDGTPWPGNNTQDHPGMIQVFLGREGGHDAEGNELPNLVYVSREKRPAFPHNKRAGAMNALVRVSGVLTNSSFILNLDCDHYVNNSKAVREAMCFLMDPQTGKRVCYVQFPQRFDGIDKSDRYSNRNRVFFDINMKGLDGIQGPMYVGTGCVFRRQALYGHEPPKAAKRPRMGTCGCCPCFRRQKQYQKNSKANVIREAANLEGMEENKEHLLSQMNSERKFGQSAIFVTSTLVEQGGVPASSSREALLKEAIHVMSCDYEDKTEWGTELGWIYGSVTEDILTGFKLHSRGWRSIYCMPKRSAFKGSAPINLSDRLNQALRWALGSVEIFFSRHNPICYGCKEGKIKFLERFAYINTTIYPFTSIPLLAYCLLPAICLLTDKFIMPEMSAFSGLLLVALFVSFFASGILELRWSGVTIEEWWRNEQFWVIGGISSHLFAVFQGLAKILTKNDTIFTVTFKLFDDKEDKELYNFKWTALLIPPTTVLIINLVGIVAGITDAINTGYEAMRPLIGKLFFVFWVISHLYPFLKGLMGRQNRTPTIVVIWSILLASIFSLVWMRIDPFVIRARGPDPKQCGINC
ccccccEEEEcccccEEEEEccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccEEEEccccccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHcccccccccccccEEEEEccccccccHHHHHHHHHHHHHcccccccEEEEEcccccHHHHHHHHHHHHHHHHHcHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccEEEEEcccccccccccccccEEEEEccccccccccccccccHHHHHHccccccccEEEEEcccccccHHHHHHHHHHHcccccccccEEEEEccccccccccccccccccccccccccccccccccccEEccccEEEEEcccccccccccccccccccccccccccccccccccHHHHHHHHHHccccHHHHHHHHHHHccccccccccHHHccHHHHHccccccccHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHcccEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccEEcccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccc
ccccccEEEccccccEEEEEEcccccccHHcccccEEEEccccccEccccccEEcccccccccccHcHHHHHHcccccccccccccEccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccEEcccccccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHccccccccccccEEEEEcccccccccEEEHHHHHHHHHccccccEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEccccccccccccccccEEEEEcccccccccccccccEEEEEEcccccccccccHHHHHHHHHHHHHHHccccEEEEcccccEEccHHHHHHHHHHHccccccccEEEEEccccccccccccccccccEEEEEEEccccccccccEEEcccHHEEEEEEcccccccccccccccccccccccccccccccccccHHHHHHHcccccccccHHHHHHHHcHHHccccHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcccccccccccEEEEEcccccHHHcccHHcccccEEEEEccccccccccccccHHHHHHHHHHHHHccEEEEEcccccEEEccccccccHHHHHHHHHHcEccHHHHHHHHHHHHHHHHHHcccEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHcccEEEEcHHHHHHHHHHHHHHHHHHcccEEEEEEEccccccHHHHHEEEEHHHHHHcHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEHHHHHHHHHHHHHHHcccccccccccccHHHccccc
MAANAILFAGSHNRNELVLIhnheepkpwksldgqvceicgdeigkmangdLFLAceecgfpvcrpcyeyerregtqlcpqcktrykrikgsprvegdadeediddiehefniedenkivhnENAKAEAMLHGklsygrgpnddeytpvdgefpiqqklssslhkrvhpypdsggakettddwklqqgnlvqetngtkdsdtsmidesrqplsrkvpiatskinpYRMVVAARLVIMVLFLQYRIMNPVNDAVGLWLTSVICEIWFGFSwildqfpkwlpiqrETYLERLSIRyeregepnmlapvDIFVttvdpmkepplvtANTILSVLAmdypvdkiscyisddgasllsFESLSETADFARKWVpfckkysieprapemyfsqKVDYLKDKVQPAFVKERRAMKREYEEFKVRMNALVAksrmipqdgwimqdgtpwpgnntqdhpgMIQVFLgregghdaegnelpnlvyvsrekrpafphnkragAMNALVRVSGVltnssfilnldcdhyvnnSKAVREAMCflmdpqtgkrvcyvqfpqrfdgidksdrysnrnrvffdinmkgldgiqgpmyvgtgcvfrrqalygheppkaakrprmgtcgccpcfrrqkqyqknSKANVIREAANLEGMEENKEHLLSQMNSERKFGQSAIFVTSTLVeqggvpassSREALLKEAIHVMScdyedktewgteLGWIYGSVTEDILTgfklhsrgwrsiycmpkrsafkgsapinlSDRLNQALRWALGSVEIFfsrhnpicygckegKIKFLERFAYInttiypftsiplLAYCLLPAIclltdkfimpemsAFSGLLLVALFVSFFASGILELRWSGVTIEEWWRNEQFWVIGGISSHLFAVFQGLAKILTKNDTIFTVTFKlfddkedkelynfkwtallipptTVLIINLVGIVAGITDAINTGYEAMRPLIGKLFFVFWVISHLYPFlkglmgrqnrtpTIVVIWSILLASIFSLVWMRidpfvirargpdpkqcginc
maanailfagshnrNELVLIHNHeepkpwkslDGQVCEICGDEIGKMANGDLFLACEECGFPVCRPCYEYErregtqlcpqcktrykrikgsprvegdadeeDIDDIEHEFNIEDENKIVHNENAKAEAMLHGKLSYGRGPNDDEYTPVDGEFPIQQKLSSSLHKRVHPYPDSGGAKETTDDWKLQQGnlvqetngtkdsdtsmidesrqplsrkvpiatskinpyrMVVAARLVIMVLFLQYRIMNPVNDAVGLWLTSVICEIWFGFSWILDQFPKWLPIQRETYLERLSIRyeregepnmlaPVDIFVTTVDPMKEPPLVTANTILSVLAMDYPVDKISCYISDDGASLLSFESLSETADFARKWVPFCKKysieprapemyfsqkvdylkdkvqpAFVKERRAMKREYEEFKVRMNALVAKSRMIPQDGWIMQDGTPWPGNNTQDHPGMIQVFLGREGGHDAEGNELPNLVYVSREKRPAFPHNKRAGAMNALVRVSGVLTNSSFILNLDCDHYVNNSKAVREAMCFLMDPQTGKRVCYVQFPQrfdgidksdrysnRNRVFFDINMKGLDGIQGPMYVGTGCVFRRQALYGheppkaakrprmGTCGCCPCFRrqkqyqknskANVIREAANLEGMEENKEHLLSQMNSERKFGQSAIFVTSTLVEQGGVPASSSREALLKEAIHVMSCDYEDKTEWGTELGWIYGSVTEDILTGFKLHSRGWRSIYCMPKRSAFKGSAPINLSDRLNQALRWALGSVEIFFSRHNPICYGCKEGKIKFLERFAYINTTIYPFTSIPLLAYCLLPAICLLTDKFIMPEMSAFSGLLLVALFVSFFASGILELRWSGVTIEEWWRNEQFWVIGGISSHLFAVFQGLAKILTKNDTIFTVTFKLFDDKEDKELYNFKWTALLIPPTTVLIINLVGIVAGITDAINTGYEAMRPLIGKLFFVFWVISHLYPFLKGLMGRQNRTPTIVVIWSILLASIFSLVWMRIDPFVirargpdpkqcginc
MAANAILFAGSHNRNELVLIHNHEEPKPWKSLDGQVCEICGDEIGKMANGDLFLACEECGFPVCRPCYEYERREGTQLCPQCKTRYKRIKGSPRVegdadeediddiehefniedeNKIVHNENAKAEAMLHGKLSYGRGPNDDEYTPVDGEFPIQQKLSSSLHKRVHPYPDSGGAKETTDDWKLQQGNLVQETNGTKDSDTSMIDESRQPLSRKVPIATSKINPYRMVVAARLVIMVLFLQYRIMNPVNDAVGLWLTSVICEIWFGFSWILDQFPKWLPIQRETYLERLSIRYEREGEPNMLAPVDIFVTTVDPMKEPPLVTANTILSVLAMDYPVDKISCYISDDGASLLSFESLSETADFARKWVPFCKKYSIEPRAPEMYFSQKVDYLKDKVQPAFVKERRAMKREYEEFKVRMNALVAKSRMIPQDGWIMQDGTPWPGNNTQDHPGMIQVFLGREGGHDAEGNELPNLVYVSREKRPAFPHNKRAGAMNALVRVSGVLTNSSFILNLDCDHYVNNSKAVREAMCFLMDPQTGKRVCYVQFPQRFDGIDKSDRYSNRNRVFFDINMKGLDGIQGPMYVGTGCVFRRQALYGHEPPKAAKRPRMGTCGCCPCFRRQKQYQKNSKANVIREAANLEGMEENKEHLLSQMNSERKFGQSAIFVTSTLVEQGGVPASSSREALLKEAIHVMSCDYEDKTEWGTELGWIYGSVTEDILTGFKLHSRGWRSIYCMPKRSAFKGSAPINLSDRLNQALRWALGSVEIFFSRHNPICYGCKEGKIKFLERFAYINTTIYPFTSIPLLAYCLLPAICLLTDKFIMPEMsafsglllvalfvsffasGILELRWSGVTIEEWWRNEQFWVIGGISSHLFAVFQGLAKILTKNDTIFTVTFKLFDDKEDKELYNFKWTALLIPPTTVLIINLVGIVAGITDAINTGYEAMRPLIGKLFFVFWVISHLYPFLKGLMGRQNRTPTIVVIWSILLASIFSLVWMRIDPFVIRARGPDPKQCGINC
*****ILFAGSHNRNELVLIHNHEEPKPWKSLDGQVCEICGDEIGKMANGDLFLACEECGFPVCRPCYEYERREGTQLCPQCKTRYK**********************************************************************************************************************************IATSKINPYRMVVAARLVIMVLFLQYRIMNPVNDAVGLWLTSVICEIWFGFSWILDQFPKWLPIQRETYLERLSIRYEREGEPNMLAPVDIFVTTVDPMKEPPLVTANTILSVLAMDYPVDKISCYISDDGASLLSFESLSETADFARKWVPFCKKYSIEPRAPEMYFSQKVDYLKDKVQPAFVKERRAMKREYEEFKVRMNALVAKSRMIPQDGWIMQDGTPWPG******PGMIQVFLGR***********PNLVYV*************AGAMNALVRVSGVLTNSSFILNLDCDHYVNNSKAVREAMCFLMDPQTGKRVCYVQFPQRFDGIDKSDRYSNRNRVFFDINMKGLDGIQGPMYVGTGCVFRRQALYGH*********RMGTCGCCPCFRRQ*****************************************AIFVTSTLVE***********ALLKEAIHVMSCDYEDKTEWGTELGWIYGSVTEDILTGFKLHSRGWRSIYCMPKRSAFKGSAPINLSDRLNQALRWALGSVEIFFSRHNPICYGCKEGKIKFLERFAYINTTIYPFTSIPLLAYCLLPAICLLTDKFIMPEMSAFSGLLLVALFVSFFASGILELRWSGVTIEEWWRNEQFWVIGGISSHLFAVFQGLAKILTKNDTIFTVTFKLFDDKEDKELYNFKWTALLIPPTTVLIINLVGIVAGITDAINTGYEAMRPLIGKLFFVFWVISHLYPFLKGLMGRQNRTPTIVVIWSILLASIFSLVWMRIDPFVIRA************
****AILFAGSHNRNEL*********************ICGDEIGKMANGDLFLACEECGFPVCRPCYEYERREGTQLCPQCKT*********************************************************************************************************************************RKVPIATSKINPYRMVVAARLVIMVLFLQYRIMNPVNDAVGLWLTSVICEIWFGFSWILDQFPKWLPIQRETYLERL*************APVDIFVTTVDPMKEPPLVTANTILSVLAMDYPVDKISCYISDDGASLLSFESLSETADFARKWVPFCKKYSIEPRAPEMYFSQ***********AFVKERRAMKREYEEFKVRMNALVAKSRMIPQDGWIMQDGTPWPGNNTQDHPGMIQVFLGREGGHDAEGNELPNLVYVSREKRPAFPHNKRAGAMNALVRVSGVLTNSSFILNLDCDHYVNNSKAVREAMCFLMDPQTGKRVCYVQFPQRFDGIDKSDRYSNRNRVFFDINMKGLDGIQGPMYVGTGCVFRRQALYGHEPPKAAKRPRMGTCGCCPCFRR**********************EEN********************VTSTLVEQGGVPASSSREALLKEAIHVMSCDYEDKTEWGTELGWIYGSVTEDILTGFKLHSRGWRSIYCMPKRSAFKGSAPINLSDRLNQALRWALGSVEIFFSRHNPICYGCKEGKIKFLERFAYINTTIYPFTSIPLLAYCLLPAICLLTDKFIMPEMSAFSGLLLVALFVSFFASGILELRWSGVTIEEWWRNEQFWVIGGISSHLFAVFQGLAKILTKNDTIFTVTFKLFDDKEDKELYNFKWTALLIPPTTVLIINLVGIVAGITDAINTGYEAMRPLIGKLFFVFWVISHLYPFLKGLMGRQNRTPTIVVIWSILLASIFSLVWMRIDPFVIRARGPDPKQCGINC
MAANAILFAGSHNRNELVLIHNHEEPKPWKSLDGQVCEICGDEIGKMANGDLFLACEECGFPVCRPCYEYERREGTQLCPQCKTRYKRI***********EEDIDDIEHEFNIEDENKIVHNENAKAEAMLHGKLSYGRGPNDDEYTPVDGEFPIQQKLSSSLHKRVHPYPDSGGAKETTDDWKLQQGNLVQETNGTKDSDTSMIDESRQPLSRKVPIATSKINPYRMVVAARLVIMVLFLQYRIMNPVNDAVGLWLTSVICEIWFGFSWILDQFPKWLPIQRETYLERLSIRYEREGEPNMLAPVDIFVTTVDPMKEPPLVTANTILSVLAMDYPVDKISCYISDDGASLLSFESLSETADFARKWVPFCKKYSIEPRAPEMYFSQKVDYLKDKVQPAFVKERRAMKREYEEFKVRMNALVAKSRMIPQDGWIMQDGTPWPGNNTQDHPGMIQVFLGREGGHDAEGNELPNLVYVSREKRPAFPHNKRAGAMNALVRVSGVLTNSSFILNLDCDHYVNNSKAVREAMCFLMDPQTGKRVCYVQFPQRFDGIDKSDRYSNRNRVFFDINMKGLDGIQGPMYVGTGCVFRRQALYGHEP********MGTCGCCPCFRRQKQYQKNSKANVIREAANLEGMEENKEHLLSQMNSERKFGQSAIFVTSTLVEQGGVPASSSREALLKEAIHVMSCDYEDKTEWGTELGWIYGSVTEDILTGFKLHSRGWRSIYCMPKRSAFKGSAPINLSDRLNQALRWALGSVEIFFSRHNPICYGCKEGKIKFLERFAYINTTIYPFTSIPLLAYCLLPAICLLTDKFIMPEMSAFSGLLLVALFVSFFASGILELRWSGVTIEEWWRNEQFWVIGGISSHLFAVFQGLAKILTKNDTIFTVTFKLFDDKEDKELYNFKWTALLIPPTTVLIINLVGIVAGITDAINTGYEAMRPLIGKLFFVFWVISHLYPFLKGLMGRQNRTPTIVVIWSILLASIFSLVWMRIDPFVIRARGPDPKQCGINC
****AILFAGSHNRNELVLIHNHEEPKPW*SLDGQVCEICGDEIGKMANGDLFLACEECGFPVCRPCYEYERREGTQLCPQCKTRYK*******************IEHEFNIE*************************************EFPIQQKLSSSLHKRVHPYPDSGGAKETTDDWKL*******************IDESRQPLSRKVPIATSKINPYRMVVAARLVIMVLFLQYRIMNPVNDAVGLWLTSVICEIWFGFSWILDQFPKWLPIQRETYLERLSIRYEREGEPNMLAPVDIFVTTVDPMKEPPLVTANTILSVLAMDYPVDKISCYISDDGASLLSFESLSETADFARKWVPFCKKYSIEPRAPEMYFSQKVDYLKDKVQPAFVKERRAMKREYEEFKVRMNALVAKSRMIPQDGWIMQDGTPWPGNNTQDHPGMIQVFLGREGGHDAEGNELPNLVYVSREKRPAFPHNKRAGAMNALVRVSGVLTNSSFILNLDCDHYVNNSKAVREAMCFLMDPQTGKRVCYVQFPQRFDGIDKSDRYSNRNRVFFDINMKGLDGIQGPMYVGTGCVFRRQALYGHEPPKAAKRPRMGTCGCCPCFR*************************NKEHLLSQMNSERKFGQSAIFVTSTLVEQGGVPASSSREALLKEAIHVMSCDYEDKTEWGTELGWIYGSVTEDILTGFKLHSRGWRSIYCMPKRSAFKGSAPINLSDRLNQALRWALGSVEIFFSRHNPICYGCKEGKIKFLERFAYINTTIYPFTSIPLLAYCLLPAICLLTDKFIMPEMSAFSGLLLVALFVSFFASGILELRWSGVTIEEWWRNEQFWVIGGISSHLFAVFQGLAKILTKNDTIFTVTFKLFDDKEDKELYNFKWTALLIPPTTVLIINLVGIVAGITDAINTGYEAMRPLIGKLFFVFWVISHLYPFLKGLMGRQNRTPTIVVIWSILLASIFSLVWMRIDPFVIRARGPDPKQCGINC
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MAANAILFAGSHNRNELVLIHNHEEPKPWKSLDGQVCEICGDEIGKMANGDLFLACEECGFPVCRPCYEYERREGTQLCPQCKTRYKRIKGSPRVEGDADEEDIDDIEHEFNIEDENKIVHNENAKAEAMLHGKLSYGRGPNDDEYTPVDGEFPIQQKLSSSLHKRVHPYPDSGGAKETTDDWKLQQGNLVQETNGTKDSDTSMIDESRQPLSRKVPIATSKINPYRMVVAARLVIMVLFLQYRIMNPVNDAVGLWLTSVICEIWFGFSWILDQFPKWLPIQRETYLERLSIRYEREGEPNMLAPVDIFVTTVDPMKEPPLVTANTILSVLAMDYPVDKISCYISDDGASLLSFESLSETADFARKWVPFCKKYSIEPRAPEMYFSQKVDYLKDKVQPAFVKExxxxxxxxxxxxxxxxxxxxxSRMIPQDGWIMQDGTPWPGNNTQDHPGMIQVFLGREGGHDAEGNELPNLVYVSREKRPAFPHNKRAGAMNALVRVSGVLTNSSFILNLDCDHYVNNSKAVREAMCFLMDPQTGKRVCYVQFPQRFDGIDKSDRYSNRNRVFFDINMKGLDGIQGPMYVGTGCVFRRQALYGHEPPKAAKRPRMGTCGCCPCFRRQKQYQKNSKANVIREAANLEGMEENKEHLLSQMNSERKFGQSAIFVTSTLVEQGGVPASSSREALLKEAIHVMSCDYEDKTEWGTELGWIYGSVTEDILTGFKLHSRGWRSIYCMPKRSAFKGSAPINLSDRLNQALRWALGSVEIFFSRHNPICYGCKEGKIKFLERFAYINTTIYPFTSIPLLAYCLLPAICLLTDKFIMPEMSAFSGLLLVALFVSFFASGILELRWSGVTIEEWWRNEQFWVIGGISSHLFAVFQGLAKILTKNDTIFTVTFKLFDDKEDKELYNFKWTALLIPPTTVLIINLVGIVAGITDAINTGYEAMRPLIGKLFFVFWVISHLYPFLKGLMGRQNRTPTIVVIWSILLASIFSLVWMRIDPFVIRARGPDPKQCGINC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1015 2.2.26 [Sep-21-2011]
Q9SWW61026 Cellulose synthase A cata yes no 0.995 0.984 0.756 0.0
Q69P511055 Cellulose synthase A cata yes no 0.998 0.960 0.718 0.0
A2Z1C81055 Cellulose synthase A cata N/A no 0.998 0.960 0.718 0.0
Q84M431073 Probable cellulose syntha no no 0.962 0.910 0.628 0.0
A2XN661073 Probable cellulose syntha N/A no 0.962 0.910 0.628 0.0
Q84ZN61081 Probable cellulose syntha no no 0.963 0.904 0.629 0.0
Q941L01065 Cellulose synthase A cata no no 0.973 0.927 0.626 0.0
Q69V231093 Probable cellulose syntha no no 0.995 0.924 0.612 0.0
Q851L81092 Probable cellulose syntha no no 0.995 0.924 0.614 0.0
A2XNT21092 Probable cellulose syntha N/A no 0.995 0.924 0.614 0.0
>sp|Q9SWW6|CESA7_ARATH Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1 Back     alignment and function desciption
 Score = 1617 bits (4186), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 780/1031 (75%), Positives = 886/1031 (85%), Gaps = 21/1031 (2%)

Query: 1    MAANAILFAGSHNRNELVLIHNHEEPKPWKSLDGQVCEICGDEIGKMANGDLFLACEECG 60
            M A+A L AGSHNRNELV+IHNHEEPKP K+LDGQ CEICGD+IG    GDLF+AC ECG
Sbjct: 1    MEASAGLVAGSHNRNELVVIHNHEEPKPLKNLDGQFCEICGDQIGLTVEGDLFVACNECG 60

Query: 61   FPVCRPCYEYERREGTQLCPQCKTRYKRIKGSPRVEGDADEEDIDDIEHEFNIEDENKIV 120
            FP CRPCYEYERREGTQ CPQCKTRYKR++GSPRVEGD DEEDIDDIE+EFNIE E    
Sbjct: 61   FPACRPCYEYERREGTQNCPQCKTRYKRLRGSPRVEGDEDEEDIDDIEYEFNIEHEQD-- 118

Query: 121  HNENAKAEAMLHGKLSYGRGPNDDE---YTPV-----DGEFPIQQKLSSS---LHKRVHP 169
                  AEAML+GK+SYGRGP DDE   + PV      GEFP+     +    LHKRVHP
Sbjct: 119  -KHKHSAEAMLYGKMSYGRGPEDDENGRFPPVIAGGHSGEFPVGGGYGNGEHGLHKRVHP 177

Query: 170  YPDS-----GGAKETTDDWKLQQGNLVQETNGTKDSDTSMIDESRQPLSRKVPIATSKIN 224
            YP S     GG +E  DDWKLQ GNL  E +   D +  +IDE+RQPLSRKVPIA+SKIN
Sbjct: 178  YPSSEAGSEGGWRERMDDWKLQHGNLGPEPD--DDPEMGLIDEARQPLSRKVPIASSKIN 235

Query: 225  PYRMVVAARLVIMVLFLQYRIMNPVNDAVGLWLTSVICEIWFGFSWILDQFPKWLPIQRE 284
            PYRMV+ ARLVI+ +FL+YR++NPV+DA+GLWLTSVICEIWF  SWILDQFPKW PI+RE
Sbjct: 236  PYRMVIVARLVILAVFLRYRLLNPVHDALGLWLTSVICEIWFAVSWILDQFPKWFPIERE 295

Query: 285  TYLERLSIRYEREGEPNMLAPVDIFVTTVDPMKEPPLVTANTILSVLAMDYPVDKISCYI 344
            TYL+RLS+RYEREGEPNMLAPVD+FV+TVDP+KEPPLVT+NT+LS+LAMDYPV+KISCY+
Sbjct: 296  TYLDRLSLRYEREGEPNMLAPVDVFVSTVDPLKEPPLVTSNTVLSILAMDYPVEKISCYV 355

Query: 345  SDDGASLLSFESLSETADFARKWVPFCKKYSIEPRAPEMYFSQKVDYLKDKVQPAFVKER 404
            SDDGAS+L+FESLSETA+FARKWVPFCKK+SIEPRAPEMYF+ KVDYL+DKV P FVKER
Sbjct: 356  SDDGASMLTFESLSETAEFARKWVPFCKKFSIEPRAPEMYFTLKVDYLQDKVHPTFVKER 415

Query: 405  RAMKREYEEFKVRMNALVAKSRMIPQDGWIMQDGTPWPGNNTQDHPGMIQVFLGREGGHD 464
            RAMKREYEEFKVR+NA VAK+  +P +GWIMQDGTPWPGNNT+DHPGMIQVFLG  GG D
Sbjct: 416  RAMKREYEEFKVRINAQVAKASKVPLEGWIMQDGTPWPGNNTKDHPGMIQVFLGHSGGFD 475

Query: 465  AEGNELPNLVYVSREKRPAFPHNKRAGAMNALVRVSGVLTNSSFILNLDCDHYVNNSKAV 524
             EG+ELP LVYVSREKRP F H+K+AGAMNALVRV+GVLTN+ F+LNLDCDHYVNNSKAV
Sbjct: 476  VEGHELPRLVYVSREKRPGFQHHKKAGAMNALVRVAGVLTNAPFMLNLDCDHYVNNSKAV 535

Query: 525  REAMCFLMDPQTGKRVCYVQFPQRFDGIDKSDRYSNRNRVFFDINMKGLDGIQGPMYVGT 584
            REAMCFLMDPQ GK+VCYVQFPQRFDGID +DRY+NRN VFFDINMKGLDGIQGP+YVGT
Sbjct: 536  REAMCFLMDPQIGKKVCYVQFPQRFDGIDTNDRYANRNTVFFDINMKGLDGIQGPVYVGT 595

Query: 585  GCVFRRQALYGHEPPKAAKRPRMGTCGCCPCFRRQKQYQKNSKANVIREAANLEGMEENK 644
            GCVF+RQALYG+EPPK  KRP+M +CGCCPCF R+++ +K SK ++  + A L G E +K
Sbjct: 596  GCVFKRQALYGYEPPKGPKRPKMISCGCCPCFGRRRKNKKFSKNDMNGDVAALGGAEGDK 655

Query: 645  EHLLSQMNSERKFGQSAIFVTSTLVEQGGVPASSSREALLKEAIHVMSCDYEDKTEWGTE 704
            EHL+S+MN E+ FGQS+IFVTSTL+E+GGVP SSS   LLKEAIHV+SC YEDKTEWGTE
Sbjct: 656  EHLMSEMNFEKTFGQSSIFVTSTLMEEGGVPPSSSPAVLLKEAIHVISCGYEDKTEWGTE 715

Query: 705  LGWIYGSVTEDILTGFKLHSRGWRSIYCMPKRSAFKGSAPINLSDRLNQALRWALGSVEI 764
            LGWIYGS+TEDILTGFK+H RGWRSIYCMPKR AFKGSAPINLSDRLNQ LRWALGSVEI
Sbjct: 716  LGWIYGSITEDILTGFKMHCRGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEI 775

Query: 765  FFSRHNPICYGCKEGKIKFLERFAYINTTIYPFTSIPLLAYCLLPAICLLTDKFIMPEMS 824
            FFSRH+P+ YG K GK+K+LERFAY NTTIYPFTSIPLLAYC+LPAICLLTDKFIMP +S
Sbjct: 776  FFSRHSPLWYGYKGGKLKWLERFAYANTTIYPFTSIPLLAYCILPAICLLTDKFIMPPIS 835

Query: 825  AFSGLLLVALFVSFFASGILELRWSGVTIEEWWRNEQFWVIGGISSHLFAVFQGLAKILT 884
             F+ L  ++LF+S   +GILELRWSGV+IEEWWRNEQFWVIGGIS+HLFAV QGL KIL 
Sbjct: 836  TFASLFFISLFMSIIVTGILELRWSGVSIEEWWRNEQFWVIGGISAHLFAVVQGLLKILA 895

Query: 885  KNDTIFTVTFKLFDDKEDKELYNFKWTALLIPPTTVLIINLVGIVAGITDAINTGYEAMR 944
              DT FTVT K  DD +  ELY FKWT LLIPPTTVLIIN+VG+VAGI+DAIN GY++  
Sbjct: 896  GIDTNFTVTSKATDDDDFGELYAFKWTTLLIPPTTVLIINIVGVVAGISDAINNGYQSWG 955

Query: 945  PLIGKLFFVFWVISHLYPFLKGLMGRQNRTPTIVVIWSILLASIFSLVWMRIDPFVIRAR 1004
            PL GKLFF FWVI HLYPFLKGLMGRQNRTPTIVVIWS+LLASIFSL+W+RIDPFV++ +
Sbjct: 956  PLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVLKTK 1015

Query: 1005 GPDPKQCGINC 1015
            GPD  +CGINC
Sbjct: 1016 GPDTSKCGINC 1026
Catalytic subunit of cellulose synthase terminal complexes ('rosettes'), required for beta-1,4-glucan microfibril crystallization, a major mechanism of the cell wall formation. Involved in the secondary cell wall formation. Required for the xylem cell wall thickening.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 2
>sp|Q69P51|CESA9_ORYSJ Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1 Back     alignment and function description
>sp|A2Z1C8|CESA9_ORYSI Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1 Back     alignment and function description
>sp|Q84M43|CESA2_ORYSJ Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA2 PE=2 SV=1 Back     alignment and function description
>sp|A2XN66|CESA2_ORYSI Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA2 PE=2 SV=1 Back     alignment and function description
>sp|Q84ZN6|CESA8_ORYSJ Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA8 PE=2 SV=1 Back     alignment and function description
>sp|Q941L0|CESA3_ARATH Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana GN=CESA3 PE=1 SV=2 Back     alignment and function description
>sp|Q69V23|CESA3_ORYSJ Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA3 PE=2 SV=1 Back     alignment and function description
>sp|Q851L8|CESA5_ORYSJ Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA5 PE=2 SV=1 Back     alignment and function description
>sp|A2XNT2|CESA5_ORYSI Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA5 PE=2 SV=1 Back     alignment and function description

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1015
TAIR|locus:21789351026 IRX3 "IRREGULAR XYLEM 3" [Arab 0.995 0.984 0.734 0.0
TAIR|locus:2124167985 IRX1 "IRREGULAR XYLEM 1" [Arab 0.788 0.812 0.681 0.0
TAIR|locus:21724571049 CESA4 "cellulose synthase A4" 0.564 0.546 0.605 0.0
TAIR|locus:21781931069 CESA5 "cellulose synthase 5" [ 0.476 0.452 0.656 0.0
TAIR|locus:21363081084 CESA2 "cellulose synthase A2" 0.450 0.421 0.678 0.0
TAIR|locus:21760901084 CESA6 "cellulose synthase 6" [ 0.466 0.437 0.653 0.0
TAIR|locus:21567891065 CEV1 "CONSTITUTIVE EXPRESSION 0.441 0.420 0.702 0.0
TAIR|locus:20525761088 CESA9 "cellulose synthase A9" 0.456 0.425 0.672 0.0
TAIR|locus:21277761081 CESA1 "cellulose synthase 1" [ 0.462 0.433 0.638 0.0
TAIR|locus:20400801065 CESA10 "cellulose synthase 10" 0.4 0.381 0.706 0.0
TAIR|locus:2178935 IRX3 "IRREGULAR XYLEM 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 4071 (1438.1 bits), Expect = 0., P = 0.
 Identities = 757/1031 (73%), Positives = 858/1031 (83%)

Query:     1 MAANAILFAGSHNRNELVLIHNHEEPKPWKSLDGQVCEICGDEIGKMANGDLFLACEECG 60
             M A+A L AGSHNRNELV+IHNHEEPKP K+LDGQ CEICGD+IG    GDLF+AC ECG
Sbjct:     1 MEASAGLVAGSHNRNELVVIHNHEEPKPLKNLDGQFCEICGDQIGLTVEGDLFVACNECG 60

Query:    61 FPVCRPCYEYERREGTQLCPQCKTRYKRIKGSPRVXXXXXXXXXXXXXXXXXXXXXNKIV 120
             FP CRPCYEYERREGTQ CPQCKTRYKR++GSPRV                         
Sbjct:    61 FPACRPCYEYERREGTQNCPQCKTRYKRLRGSPRVEGDEDEEDIDDIEYEFNIEHEQD-K 119

Query:   121 HNENAKAEAMLHGKLSYGRGPNDDE---YTPV-----DGEFPIQQKLSSS---LHKRVHP 169
             H  +A  EAML+GK+SYGRGP DDE   + PV      GEFP+     +    LHKRVHP
Sbjct:   120 HKHSA--EAMLYGKMSYGRGPEDDENGRFPPVIAGGHSGEFPVGGGYGNGEHGLHKRVHP 177

Query:   170 YPDS-----GGAKETTDDWKLQQGNLVQETNGTKDSDTSMIDESRQPLSRKVPIATSKIN 224
             YP S     GG +E  DDWKLQ GNL  E +   D +  +IDE+RQPLSRKVPIA+SKIN
Sbjct:   178 YPSSEAGSEGGWRERMDDWKLQHGNLGPEPDD--DPEMGLIDEARQPLSRKVPIASSKIN 235

Query:   225 PYRMVVAARLVIMVLFLQYRIMNPVNDAVGLWLTSVICEIWFGFSWILDQFPKWLPIQRE 284
             PYRMV+ ARLVI+ +FL+YR++NPV+DA+GLWLTSVICEIWF  SWILDQFPKW PI+RE
Sbjct:   236 PYRMVIVARLVILAVFLRYRLLNPVHDALGLWLTSVICEIWFAVSWILDQFPKWFPIERE 295

Query:   285 TYLERLSIRYEREGEPNMLAPVDIFVTTVDPMKEPPLVTANTILSVLAMDYPVDKISCYI 344
             TYL+RLS+RYEREGEPNMLAPVD+FV+TVDP+KEPPLVT+NT+LS+LAMDYPV+KISCY+
Sbjct:   296 TYLDRLSLRYEREGEPNMLAPVDVFVSTVDPLKEPPLVTSNTVLSILAMDYPVEKISCYV 355

Query:   345 SDDGASLLSFESLSETADFARKWVPFCKKYSIEPRAPEMYFSQKVDYLKDKVQPAFVKER 404
             SDDGAS+L+FESLSETA+FARKWVPFCKK+SIEPRAPEMYF+ KVDYL+DKV P FVKER
Sbjct:   356 SDDGASMLTFESLSETAEFARKWVPFCKKFSIEPRAPEMYFTLKVDYLQDKVHPTFVKER 415

Query:   405 RAMKREYEEFKVRMNALVAKSRMIPQDGWIMQDGTPWPGNNTQDHPGMIQVFLGREGGHD 464
             RAMKREYEEFKVR+NA VAK+  +P +GWIMQDGTPWPGNNT+DHPGMIQVFLG  GG D
Sbjct:   416 RAMKREYEEFKVRINAQVAKASKVPLEGWIMQDGTPWPGNNTKDHPGMIQVFLGHSGGFD 475

Query:   465 AEGNELPNLVYVSREKRPAFPHNKRAGAMNALVRVSGVLTNSSFILNLDCDHYVNNSKAV 524
              EG+ELP LVYVSREKRP F H+K+AGAMNALVRV+GVLTN+ F+LNLDCDHYVNNSKAV
Sbjct:   476 VEGHELPRLVYVSREKRPGFQHHKKAGAMNALVRVAGVLTNAPFMLNLDCDHYVNNSKAV 535

Query:   525 REAMCFLMDPQTGKRVCYVQFPQRFDGIDKSDRYSNRNRVFFDINMKGLDGIQGPMYVGT 584
             REAMCFLMDPQ GK+VCYVQFPQRFDGID +DRY+NRN VFFDINMKGLDGIQGP+YVGT
Sbjct:   536 REAMCFLMDPQIGKKVCYVQFPQRFDGIDTNDRYANRNTVFFDINMKGLDGIQGPVYVGT 595

Query:   585 GCVFRRQALYGHEPPKAAKRPRMGTCGCCPCFRRQKQYQKNSKANVIREAANLEGMEENK 644
             GCVF+RQALYG+EPPK  KRP+M +CGCCPCF R+++ +K SK ++  + A L G E +K
Sbjct:   596 GCVFKRQALYGYEPPKGPKRPKMISCGCCPCFGRRRKNKKFSKNDMNGDVAALGGAEGDK 655

Query:   645 EHLLSQMNSERKFGQSAIFVTSTLVEQGGVPASSSREALLKEAIHVMSCDYEDKTEWGTE 704
             EHL+S+MN E+ FGQS+IFVTSTL+E+GGVP SSS   LLKEAIHV+SC YEDKTEWGTE
Sbjct:   656 EHLMSEMNFEKTFGQSSIFVTSTLMEEGGVPPSSSPAVLLKEAIHVISCGYEDKTEWGTE 715

Query:   705 LGWIYGSVTEDILTGFKLHSRGWRSIYCMPKRSAFKGSAPINLSDRLNQALRWALGSVEI 764
             LGWIYGS+TEDILTGFK+H RGWRSIYCMPKR AFKGSAPINLSDRLNQ LRWALGSVEI
Sbjct:   716 LGWIYGSITEDILTGFKMHCRGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEI 775

Query:   765 FFSRHNPICYGCKEGKIKFLERFAYINTTIYPFTSIPLLAYCLLPAICLLTDKFIMPEMX 824
             FFSRH+P+ YG K GK+K+LERFAY NTTIYPFTSIPLLAYC+LPAICLLTDKFIMP + 
Sbjct:   776 FFSRHSPLWYGYKGGKLKWLERFAYANTTIYPFTSIPLLAYCILPAICLLTDKFIMPPIS 835

Query:   825 XXXXXXXXXXXXXXXXXGILELRWSGVTIEEWWRNEQFWVIGGISSHLFAVFQGLAKILT 884
                              GILELRWSGV+IEEWWRNEQFWVIGGIS+HLFAV QGL KIL 
Sbjct:   836 TFASLFFISLFMSIIVTGILELRWSGVSIEEWWRNEQFWVIGGISAHLFAVVQGLLKILA 895

Query:   885 KNDTIFTVTFKLFDDKEDKELYNFKWTALLIPPTTVLIINLVGIVAGITDAINTGYEAMR 944
               DT FTVT K  DD +  ELY FKWT LLIPPTTVLIIN+VG+VAGI+DAIN GY++  
Sbjct:   896 GIDTNFTVTSKATDDDDFGELYAFKWTTLLIPPTTVLIINIVGVVAGISDAINNGYQSWG 955

Query:   945 PLIGKLFFVFWVISHLYPFLKGLMGRQNRTPTIVVIWSILLASIFSLVWMRIDPFVIRAR 1004
             PL GKLFF FWVI HLYPFLKGLMGRQNRTPTIVVIWS+LLASIFSL+W+RIDPFV++ +
Sbjct:   956 PLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVLKTK 1015

Query:  1005 GPDPKQCGINC 1015
             GPD  +CGINC
Sbjct:  1016 GPDTSKCGINC 1026
GO:0005886 "plasma membrane" evidence=ISM;TAS
GO:0008270 "zinc ion binding" evidence=IEA
GO:0016020 "membrane" evidence=IEA
GO:0016759 "cellulose synthase activity" evidence=ISS;IMP
GO:0016760 "cellulose synthase (UDP-forming) activity" evidence=IEA
GO:0030244 "cellulose biosynthetic process" evidence=IEA;IMP
GO:0009834 "secondary cell wall biogenesis" evidence=IMP
GO:0010400 "rhamnogalacturonan I side chain metabolic process" evidence=IMP
GO:0009507 "chloroplast" evidence=IDA
GO:0052386 "cell wall thickening" evidence=IMP
GO:0009832 "plant-type cell wall biogenesis" evidence=IMP;RCA
GO:0010089 "xylem development" evidence=RCA
GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA
GO:0010413 "glucuronoxylan metabolic process" evidence=RCA
GO:0016926 "protein desumoylation" evidence=RCA
GO:0042546 "cell wall biogenesis" evidence=RCA
GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA
GO:0045492 "xylan biosynthetic process" evidence=RCA
GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA
TAIR|locus:2124167 IRX1 "IRREGULAR XYLEM 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2172457 CESA4 "cellulose synthase A4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2178193 CESA5 "cellulose synthase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2136308 CESA2 "cellulose synthase A2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2176090 CESA6 "cellulose synthase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2156789 CEV1 "CONSTITUTIVE EXPRESSION OF VSP 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2052576 CESA9 "cellulose synthase A9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127776 CESA1 "cellulose synthase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2040080 CESA10 "cellulose synthase 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
A2XN66CESA2_ORYSI2, ., 4, ., 1, ., 1, 20.62880.96250.9105N/Ano
A2Z1C8CESA9_ORYSI2, ., 4, ., 1, ., 1, 20.71800.99800.9601N/Ano
Q69P51CESA9_ORYSJ2, ., 4, ., 1, ., 1, 20.71800.99800.9601yesno
A2XNT2CESA5_ORYSI2, ., 4, ., 1, ., 1, 20.61490.99500.9249N/Ano
A2Y0X2CESA1_ORYSI2, ., 4, ., 1, ., 1, 20.60810.99900.9423N/Ano
Q9SWW6CESA7_ARATH2, ., 4, ., 1, ., 1, 20.75650.99500.9844yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.10.983
4th Layer2.4.1.120.979

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00017182001
SubName- Full=Chromosome chr11 scaffold_14, whole genome shotgun sequence; (1031 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1015
PLN021891040 PLN02189, PLN02189, cellulose synthase 0.0
PLN026381079 PLN02638, PLN02638, cellulose synthase A (UDP-form 0.0
PLN024361094 PLN02436, PLN02436, cellulose synthase A 0.0
PLN024001085 PLN02400, PLN02400, cellulose synthase 0.0
PLN029151044 PLN02915, PLN02915, cellulose synthase A [UDP-form 0.0
PLN02195977 PLN02195, PLN02195, cellulose synthase A 0.0
pfam03552716 pfam03552, Cellulose_synt, Cellulose synthase 0.0
PLN022481135 PLN02248, PLN02248, cellulose synthase-like protei 0.0
PLN02893734 PLN02893, PLN02893, Cellulose synthase-like protei 1e-168
PLN02190756 PLN02190, PLN02190, cellulose synthase-like protei 1e-140
cd06421234 cd06421, CESA_CelA_like, CESA_CelA_like are involv 3e-13
COG1215439 COG1215, COG1215, Glycosyltransferases, probably i 1e-11
TIGR03030 713 TIGR03030, CelA, cellulose synthase catalytic subu 1e-11
cd06421234 cd06421, CESA_CelA_like, CESA_CelA_like are involv 2e-11
PRK11498 852 PRK11498, bcsA, cellulose synthase catalytic subun 2e-09
TIGR03030713 TIGR03030, CelA, cellulose synthase catalytic subu 5e-07
pfam1444655 pfam14446, Prok-RING_1, Prokaryotic RING finger fa 3e-06
cd06421234 cd06421, CESA_CelA_like, CESA_CelA_like are involv 4e-06
pfam13632194 pfam13632, Glyco_trans_2_3, Glycosyl transferase f 4e-06
TIGR03030713 TIGR03030, CelA, cellulose synthase catalytic subu 5e-04
TIGR03937407 TIGR03937, PgaC_IcaA, poly-beta-1,6 N-acetyl-D-glu 9e-04
PRK11204420 PRK11204, PRK11204, N-glycosyltransferase; Provisi 0.002
PRK11498852 PRK11498, bcsA, cellulose synthase catalytic subun 0.003
>gnl|CDD|215121 PLN02189, PLN02189, cellulose synthase Back     alignment and domain information 
 Score = 1833 bits (4749), Expect = 0.0
 Identities = 794/1047 (75%), Positives = 899/1047 (85%), Gaps = 39/1047 (3%)

Query: 1    MAANAILFAGSHNRNELVLIHNHEEPKPWKSLDGQVCEICGDEIGKMANGDLFLACEECG 60
            M A+A L AGSHNRNELV+IH HEEPKP ++LDGQVCEICGDEIG   +GDLF+AC ECG
Sbjct: 1    MEASAGLVAGSHNRNELVVIHGHEEPKPLRNLDGQVCEICGDEIGLTVDGDLFVACNECG 60

Query: 61   FPVCRPCYEYERREGTQLCPQCKTRYKRIKGSPRVEGDADEEDIDDIEHEFNIEDE-NKI 119
            FPVCRPCYEYERREGTQ CPQCKTRYKR+KGSPRVEGD DEEDIDDIEHEFNI+DE +K 
Sbjct: 61   FPVCRPCYEYERREGTQNCPQCKTRYKRLKGSPRVEGDDDEEDIDDIEHEFNIDDEQDKN 120

Query: 120  VHNENAKAEAMLHGKLSYGRGPNDDE------------YTPVDGEFPI-------QQKLS 160
             H      EAMLHGK+SYGRGP+DDE              PV GEFPI       +Q LS
Sbjct: 121  KHI----TEAMLHGKMSYGRGPDDDENNQFPPVITGVRSRPVSGEFPIGSGYGHGEQMLS 176

Query: 161  SSLHKRVHPYPDS------------GGAKETTDDWKLQQGNLVQETNGTKDSDTSMIDES 208
            SSLHKRVHPYP S            GG KE  DDWK+QQGNL  + +   D+D ++IDE+
Sbjct: 177  SSLHKRVHPYPVSEPGSAKWDEKKEGGWKERMDDWKMQQGNLGPDPD-DYDADMALIDEA 235

Query: 209  RQPLSRKVPIATSKINPYRMVVAARLVIMVLFLQYRIMNPVNDAVGLWLTSVICEIWFGF 268
            RQPLSRKVPIA+SK+NPYRMV+ ARLV++  FL+YRI++PV+DA+GLWLTS+ICEIWF  
Sbjct: 236  RQPLSRKVPIASSKVNPYRMVIVARLVVLAFFLRYRILHPVHDAIGLWLTSIICEIWFAV 295

Query: 269  SWILDQFPKWLPIQRETYLERLSIRYEREGEPNMLAPVDIFVTTVDPMKEPPLVTANTIL 328
            SWILDQFPKW PI RETYL+RLS+RYEREGEPNML+PVDIFV+TVDP+KEPPLVTANT+L
Sbjct: 296  SWILDQFPKWFPIDRETYLDRLSLRYEREGEPNMLSPVDIFVSTVDPLKEPPLVTANTVL 355

Query: 329  SVLAMDYPVDKISCYISDDGASLLSFESLSETADFARKWVPFCKKYSIEPRAPEMYFSQK 388
            S+LAMDYPVDKISCY+SDDGAS+L+FE+LSETA+FARKWVPFCKK+SIEPRAPE YFS K
Sbjct: 356  SILAMDYPVDKISCYVSDDGASMLTFEALSETAEFARKWVPFCKKFSIEPRAPEFYFSLK 415

Query: 389  VDYLKDKVQPAFVKERRAMKREYEEFKVRMNALVAKSRMIPQDGWIMQDGTPWPGNNTQD 448
            VDYLKDKVQP FVKERRAMKREYEEFKVR+NA+VAK++ +P +GWIMQDGTPWPGNNT+D
Sbjct: 416  VDYLKDKVQPTFVKERRAMKREYEEFKVRINAIVAKAQKVPPEGWIMQDGTPWPGNNTRD 475

Query: 449  HPGMIQVFLGREGGHDAEGNELPNLVYVSREKRPAFPHNKRAGAMNALVRVSGVLTNSSF 508
            HPGMIQVFLG  GGHD EGNELP LVYVSREKRP F H+K+AGAMNAL+RVS VLTN+ F
Sbjct: 476  HPGMIQVFLGHSGGHDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPF 535

Query: 509  ILNLDCDHYVNNSKAVREAMCFLMDPQTGKRVCYVQFPQRFDGIDKSDRYSNRNRVFFDI 568
            +LNLDCDHY+NNSKAVREAMCFLMDPQ G++VCYVQFPQRFDGID  DRY+NRN VFFDI
Sbjct: 536  MLNLDCDHYINNSKAVREAMCFLMDPQIGRKVCYVQFPQRFDGIDTHDRYANRNTVFFDI 595

Query: 569  NMKGLDGIQGPMYVGTGCVFRRQALYGHEPPKAAKRPRMGTCGCCPCFRRQKQYQKNSKA 628
            NMKGLDGIQGP+YVGTGCVFRRQALYG++PPK  KRP+M TC CCPCF R+K  +K++K 
Sbjct: 596  NMKGLDGIQGPVYVGTGCVFRRQALYGYDPPKGPKRPKMVTCDCCPCFGRRK--KKHAKN 653

Query: 629  NVIREAANLEGMEENKEHLLSQMNSERKFGQSAIFVTSTLVEQGGVPASSSREALLKEAI 688
             +  E A L GME +KE L+SQMN E+KFGQSAIFVTSTL+E+GGVP SSS  ALLKEAI
Sbjct: 654  GLNGEVAALGGMESDKEMLMSQMNFEKKFGQSAIFVTSTLMEEGGVPPSSSPAALLKEAI 713

Query: 689  HVMSCDYEDKTEWGTELGWIYGSVTEDILTGFKLHSRGWRSIYCMPKRSAFKGSAPINLS 748
            HV+SC YEDKT+WG ELGWIYGS+TEDILTGFK+H RGWRSIYCMPKR+AFKGSAPINLS
Sbjct: 714  HVISCGYEDKTDWGLELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRAAFKGSAPINLS 773

Query: 749  DRLNQALRWALGSVEIFFSRHNPICYGCKEGKIKFLERFAYINTTIYPFTSIPLLAYCLL 808
            DRLNQ LRWALGSVEIFFSRH+P+ YG K G +K+LERFAY+NTTIYPFTS+PLLAYC L
Sbjct: 774  DRLNQVLRWALGSVEIFFSRHSPLLYGYKGGNLKWLERFAYVNTTIYPFTSLPLLAYCTL 833

Query: 809  PAICLLTDKFIMPEMSAFSGLLLVALFVSFFASGILELRWSGVTIEEWWRNEQFWVIGGI 868
            PAICLLT KFIMP +S F+ L  +ALF+S FA+GILELRWSGV+IEEWWRNEQFWVIGG+
Sbjct: 834  PAICLLTGKFIMPPISTFASLFFIALFMSIFATGILELRWSGVSIEEWWRNEQFWVIGGV 893

Query: 869  SSHLFAVFQGLAKILTKNDTIFTVTFKLFDDKEDKELYNFKWTALLIPPTTVLIINLVGI 928
            S+HLFAV QGL K+L   DT FTVT K  DD E  ELY FKWT LLIPPTT+LIIN+VG+
Sbjct: 894  SAHLFAVVQGLLKVLAGIDTNFTVTSKATDDDEFGELYAFKWTTLLIPPTTLLIINIVGV 953

Query: 929  VAGITDAINTGYEAMRPLIGKLFFVFWVISHLYPFLKGLMGRQNRTPTIVVIWSILLASI 988
            VAGI+DAIN GY++  PL GKLFF FWVI HLYPFLKGLMGRQNRTPTIVVIWS+LLASI
Sbjct: 954  VAGISDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASI 1013

Query: 989  FSLVWMRIDPFVIRARGPDPKQCGINC 1015
            FSL+W+RIDPFV++ +GPD KQCGINC
Sbjct: 1014 FSLLWVRIDPFVLKTKGPDVKQCGINC 1040

Length = 1040
>gnl|CDD|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information
>gnl|CDD|215239 PLN02436, PLN02436, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215224 PLN02400, PLN02400, cellulose synthase Back     alignment and domain information
>gnl|CDD|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>gnl|CDD|215124 PLN02195, PLN02195, cellulose synthase A Back     alignment and domain information
>gnl|CDD|217611 pfam03552, Cellulose_synt, Cellulose synthase Back     alignment and domain information
>gnl|CDD|215138 PLN02248, PLN02248, cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|215483 PLN02893, PLN02893, Cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|215122 PLN02190, PLN02190, cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>gnl|CDD|224136 COG1215, COG1215, Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>gnl|CDD|236918 PRK11498, bcsA, cellulose synthase catalytic subunit; Provisional Back     alignment and domain information
>gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>gnl|CDD|222758 pfam14446, Prok-RING_1, Prokaryotic RING finger family 1 Back     alignment and domain information
>gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>gnl|CDD|222273 pfam13632, Glyco_trans_2_3, Glycosyl transferase family group 2 Back     alignment and domain information
>gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>gnl|CDD|188452 TIGR03937, PgaC_IcaA, poly-beta-1,6 N-acetyl-D-glucosamine synthase Back     alignment and domain information
>gnl|CDD|236882 PRK11204, PRK11204, N-glycosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|236918 PRK11498, bcsA, cellulose synthase catalytic subunit; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1015
PLN024001085 cellulose synthase 100.0
PLN024361094 cellulose synthase A 100.0
PLN021891040 cellulose synthase 100.0
PLN026381079 cellulose synthase A (UDP-forming), catalytic subu 100.0
PLN029151044 cellulose synthase A [UDP-forming], catalytic subu 100.0
PLN02195977 cellulose synthase A 100.0
PLN022481135 cellulose synthase-like protein 100.0
PF03552720 Cellulose_synt: Cellulose synthase; InterPro: IPR0 100.0
PLN02190756 cellulose synthase-like protein 100.0
PLN02893734 Cellulose synthase-like protein 100.0
TIGR03030 713 CelA cellulose synthase catalytic subunit (UDP-for 100.0
PRK11498 852 bcsA cellulose synthase catalytic subunit; Provisi 100.0
PF1456980 zf-UDP: Zinc-binding RING-finger; PDB: 1WEO_A. 100.0
PRK05454691 glucosyltransferase MdoH; Provisional 100.0
cd04191254 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon 100.0
COG1215439 Glycosyltransferases, probably involved in cell wa 99.97
PRK14583444 hmsR N-glycosyltransferase; Provisional 99.97
TIGR03111439 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 99.97
PRK11204420 N-glycosyltransferase; Provisional 99.96
PRK14716504 bacteriophage N4 adsorption protein B; Provisional 99.95
PRK11234 727 nfrB bacteriophage N4 adsorption protein B; Provis 99.94
cd06421234 CESA_CelA_like CESA_CelA_like are involved in the 99.94
cd06437232 CESA_CaSu_A2 Cellulose synthase catalytic subunit 99.93
cd06427241 CESA_like_2 CESA_like_2 is a member of the cellulo 99.92
cd06435236 CESA_NdvC_like NdvC_like proteins in this family a 99.92
PF13641228 Glyco_tranf_2_3: Glycosyltransferase like family 2 99.88
PRK15489 703 nfrB bacteriophage N4 adsorption protein B; Provis 99.87
TIGR03472373 HpnI hopanoid biosynthesis associated glycosyl tra 99.86
cd04190244 Chitin_synth_C C-terminal domain of Chitin Synthas 99.86
cd04192229 GT_2_like_e Subfamily of Glycosyltransferase Famil 99.84
cd02520196 Glucosylceramide_synthase Glucosylceramide synthas 99.82
COG2943736 MdoH Membrane glycosyltransferase [Cell envelope b 99.81
cd06434235 GT2_HAS Hyaluronan synthases catalyze polymerizati 99.8
cd06439251 CESA_like_1 CESA_like_1 is a member of the cellulo 99.78
TIGR03469384 HonB hopene-associated glycosyltransferase HpnB. T 99.77
cd02525249 Succinoglycan_BP_ExoA ExoA is involved in the bios 99.7
PF13632193 Glyco_trans_2_3: Glycosyl transferase family group 99.66
cd06436191 GlcNAc-1-P_transferase N-acetyl-glucosamine transf 99.6
cd06438183 EpsO_like EpsO protein participates in the methano 99.49
cd04184202 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot 99.45
cd04195201 GT2_AmsE_like GT2_AmsE_like is involved in exopoly 99.37
PF13506175 Glyco_transf_21: Glycosyl transferase family 21 99.27
cd06433202 GT_2_WfgS_like WfgS and WfeV are involved in O-ant 99.23
cd02510299 pp-GalNAc-T pp-GalNAc-T initiates the formation of 99.2
cd04196214 GT_2_like_d Subfamily of Glycosyltransferase Famil 99.19
cd02522221 GT_2_like_a GT_2_like_a represents a glycosyltrans 99.17
PF03142527 Chitin_synth_2: Chitin synthase; InterPro: IPR0048 99.16
PF1457048 zf-RING_4: RING/Ubox like zinc-binding domain; PDB 99.16
PLN02726243 dolichyl-phosphate beta-D-mannosyltransferase 99.15
cd06420182 GT2_Chondriotin_Pol_N N-terminal domain of Chondro 99.14
cd04186166 GT_2_like_c Subfamily of Glycosyltransferase Famil 99.13
cd06913219 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran 99.1
cd06442224 DPM1_like DPM1_like represents putative enzymes si 99.06
cd06423180 CESA_like CESA_like is the cellulose synthase supe 99.03
cd02526237 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr 99.02
cd04185202 GT_2_like_b Subfamily of Glycosyltransferase Famil 99.02
PF00535169 Glycos_transf_2: Glycosyl transferase family 2; In 98.92
cd04188211 DPG_synthase DPG_synthase is involved in protein N 98.86
PRK10073328 putative glycosyl transferase; Provisional 98.77
cd04179185 DPM_DPG-synthase_like DPM_DPG-synthase_like is a m 98.72
TIGR01556281 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids 98.67
PRK10018279 putative glycosyl transferase; Provisional 98.65
PRK10063248 putative glycosyl transferase; Provisional 98.64
KOG2571862 consensus Chitin synthase/hyaluronan synthase (gly 98.49
cd00761156 Glyco_tranf_GTA_type Glycosyltransferase family A 98.49
cd04187181 DPM1_like_bac Bacterial DPM1_like enzymes are rela 98.48
COG1216305 Predicted glycosyltransferases [General function p 98.4
PF10111281 Glyco_tranf_2_2: Glycosyltransferase like family 2 98.39
PTZ00260333 dolichyl-phosphate beta-glucosyltransferase; Provi 98.39
PRK13915306 putative glucosyl-3-phosphoglycerate synthase; Pro 98.31
PRK10714325 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi 97.81
KOG2547431 consensus Ceramide glucosyltransferase [Lipid tran 97.58
COG0463291 WcaA Glycosyltransferases involved in cell wall bi 97.33
cd02511229 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 97.21
COG5175480 MOT2 Transcriptional repressor [Transcription] 96.8
PF1444654 Prok-RING_1: Prokaryotic RING finger family 1 95.59
TIGR00570309 cdk7 CDK-activating kinase assembly factor MAT1. A 95.41
PF02364 817 Glucan_synthase: 1,3-beta-glucan synthase componen 95.33
cd02514334 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es 95.22
KOG2978238 consensus Dolichol-phosphate mannosyltransferase [ 92.85
cd0016245 RING RING-finger (Really Interesting New Gene) dom 88.01
PF05290140 Baculo_IE-1: Baculovirus immediate-early protein ( 87.69
KOG2977323 consensus Glycosyltransferase [General function pr 85.6
smart0050463 Ubox Modified RING finger domain. Modified RING fi 81.26
>PLN02400 cellulose synthase Back     alignment and domain information 
Probab=100.00  E-value=1.8e-307  Score=2714.28  Aligned_cols=1009  Identities=64%  Similarity=1.163  Sum_probs=922.7

Q ss_pred             CCCccccccccccCceEEEeccCCC--CCCCCCCCCccccccCccccccCCCCeeeccCCCCCccchhhhHHHHhhCCCC
Q 039678            1 MAANAILFAGSHNRNELVLIHNHEE--PKPWKSLDGQVCEICGDEIGKMANGDLFLACEECGFPVCRPCYEYERREGTQL   78 (1015)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~c~~c~~~vg~~~~g~~f~ac~ec~fpvCr~Cyeyer~eG~~~   78 (1015)
                      ||+++||+||||||||||+|+.|++  +||++++++|+||||||+||+|+|||+|||||||+|||||||||||||||||+
T Consensus         1 ~~~~~glvaGSh~Rnelv~i~~d~~~g~kp~~~~~gqiCqICGD~VG~t~dGe~FVAC~eCaFPVCRpCYEYERkeGnq~   80 (1085)
T PLN02400          1 MEANAGMVAGSYRRNELVRIRHDSDSGPKPLKNLNGQICQICGDDVGVTETGDVFVACNECAFPVCRPCYEYERKDGTQC   80 (1085)
T ss_pred             CCCccccccccccccceeeecccccccCCCccccCCceeeecccccCcCCCCCEEEEEccCCCccccchhheecccCCcc
Confidence            9999999999999999999998753  58999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCccccccccCCCCcCCCCCcccccccccccccccchhhhhcchhhhhhh-ccccccCCC--CCCCCCCC-C--cCCC
Q 039678           79 CPQCKTRYKRIKGSPRVEGDADEEDIDDIEHEFNIEDENKIVHNENAKAEAM-LHGKLSYGR--GPNDDEYT-P--VDGE  152 (1015)
Q Consensus        79 Cp~Ckt~ykr~kgsp~v~gd~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~-~--~~~~  152 (1015)
                      |||||||||||||||||+|||||||+||+||||+|.++++  .+.++.+... ..+  ..++  ......++ |  +++|
T Consensus        81 CPQCkTrYkR~KgsprV~GDeeedd~DDlenEf~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~p~lt~g~~~s~e  156 (1085)
T PLN02400         81 CPQCKTRYRRHKGSPRVEGDEDEDDVDDLENEFNYAQGNG--KARHQWQGEDIELS--SSSRHESQPIPLLTHGQPVSGE  156 (1085)
T ss_pred             CcccCCccccccCCCCCCcccccccchhhhhhhccccccc--cccccccccCcccc--CcccccCCCCccccCCcccCCC
Confidence            9999999999999999999999999999999999974321  1112222000 000  0000  00112244 3  4788


Q ss_pred             CCCCc----cccCC------CCCccCCCCCCCC------------------------cchhhhHHhhhcCcccc--ccCC
Q 039678          153 FPIQQ----KLSSS------LHKRVHPYPDSGG------------------------AKETTDDWKLQQGNLVQ--ETNG  196 (1015)
Q Consensus       153 ~~~~~----~~~~~------~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~--~~~~  196 (1015)
                      ++.++    .+.++      .||+|||+||+|+                        ||||||+||+||+|++.  +.++
T Consensus       157 i~~~~~~~~~~~~~~~~~~~~~~~vh~~p~~d~~~~~~~~~~d~~~~~~~~g~g~~~wkerv~~wk~~~~k~~~~~~~~~  236 (1085)
T PLN02400        157 IPCATPDNQSVRTTSGPLGPAERNANSSPYIDPRQPVPVRIVDPSKDLNSYGLGNVDWKERVEGWKLKQDKNMMQMTNKY  236 (1085)
T ss_pred             CCCCCCccccccCCcccccccCCcccccCccCcccCCCccccCccccccccccCcHHHHHHHHHHHhhhhhhcccccccc
Confidence            88432    34443      3589999999881                        99999999999975422  2221


Q ss_pred             --C----------CCCCCcccccCCCCceeeeecCCCCcchhHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHH
Q 039678          197 --T----------KDSDTSMIDESRQPLSRKVPIATSKINPYRMVVAARLVIMVLFLQYRIMNPVNDAVGLWLTSVICEI  264 (1015)
Q Consensus       197 --~----------~~~~~~~~~~~~~pl~~k~~~~~~~~~~yR~~i~~~l~~l~~yl~wRi~~~~~~~~~~Wl~~~~~E~  264 (1015)
                        +          +++|.++||++++||+||+++++++|+|||++++++|+++++||+||++|++.+++|+|+++++||+
T Consensus       237 ~~~~~g~~~~~~~~~~d~~~~~~~~~pL~~~~~i~~~~~~~yR~~~~~~lv~l~~~l~yRi~~~~~~~~~~Wl~s~~cE~  316 (1085)
T PLN02400        237 HEGKGGDMEGTGSNGDELQMADDARLPMSRVVPIPSSRLTPYRIVIILRLIILGFFLQYRVTHPVKDAYGLWLTSVICEI  316 (1085)
T ss_pred             ccccccCCCCCCCCcccccccccccCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCcccHHHHHHHHHHHH
Confidence              1          1357888999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcccccccccchhHHHHhhhhhcCCCCCCCCCeEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCcEEEE
Q 039678          265 WFGFSWILDQFPKWLPIQRETYLERLSIRYEREGEPNMLAPVDIFVTTVDPMKEPPLVTANTILSVLAMDYPVDKISCYI  344 (1015)
Q Consensus       265 ~f~~~wil~~~~kw~Pv~R~~~~drL~~r~~~~~~~~~lP~VDvfV~T~dP~kEpp~v~~nTvls~la~DYP~~kl~~yv  344 (1015)
                      ||+|+|+|+|++||+||+|+||+|||++||++|+++++||+|||||||+||.||||++|+||||||||+|||+|||+|||
T Consensus       317 wFaf~Wll~q~~Kw~Pv~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYv  396 (1085)
T PLN02400        317 WFALSWLLDQFPKWYPINRETYLDRLALRYDRDGEPSQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYV  396 (1085)
T ss_pred             HHHHHHHHccCcccccccceeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEE
Confidence            99999999999999999999999999999999988999999999999999999999999999999999999999999999


Q ss_pred             ecCCCCchhhhhhhhHHHhhhhhhhhhhhcCCCCCCcccccccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 039678          345 SDDGASLLSFESLSETADFARKWVPFCKKYSIEPRAPEMYFSQKVDYLKDKVQPAFVKERRAMKREYEEFKVRMNALVAK  424 (1015)
Q Consensus       345 sDDG~s~~T~~al~Eaa~FA~~WvPFCkk~~iepR~Pe~yFs~~~d~~~~~~~~~f~~err~mkr~Yee~k~ri~~l~~~  424 (1015)
                      ||||+|+||||||.|||+|||+||||||||+|||||||+||++|.|+++++.+|+|++|||+|||||||||+|||+|+++
T Consensus       397 SDDGgS~LTf~Al~Eaa~FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~~~  476 (1085)
T PLN02400        397 SDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAK  476 (1085)
T ss_pred             ecCCchHHHHHHHHHHHHHHHhhcchhhhcCCCcCCHHHHhccCCCcccCCCchhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCcccccccCCCCCCCCCCCCCcchhheeccCCCCCCCCCCCCCcEEEEecCCCCCCCCCCchhhhHHHHHHhcccc
Q 039678          425 SRMIPQDGWIMQDGTPWPGNNTQDHPGMIQVFLGREGGHDAEGNELPNLVYVSREKRPAFPHNKRAGAMNALVRVSGVLT  504 (1015)
Q Consensus       425 ~~~vp~~~w~m~dgt~w~~~~~~dHp~iiqv~~~~~g~~d~~~~~lP~lvYvsRekrPg~~hh~KAGALNallrvSavlt  504 (1015)
                      ++++|+++|.|+|||+|||++++|||+|||||++++|+.|.++++||+||||||||||||+||+||||||+|+||||+||
T Consensus       477 ~~~~~~~~~~m~dgt~W~g~~~~dHp~iIqVll~~~~~~d~~g~~LP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmT  556 (1085)
T PLN02400        477 AQKIPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLT  556 (1085)
T ss_pred             hccCCccccccccCccCCCCCCCCCchhhhhhhcCCCCcccccccCceeEEEeccCCCCCCcchhhhhhHHHHHHhhhhc
Confidence            99999999999999999999999999999999999998899999999999999999999999999999999999999999


Q ss_pred             CceEEEEecCCCCCCchHHHHHHHHhhcCCCCCcceEEEecCccccCCCcccchhhhHHHhhhhhhccccccCCcccccc
Q 039678          505 NSSFILNLDCDHYVNNSKAVREAMCFLMDPQTGKRVCYVQFPQRFDGIDKSDRYSNRNRVFFDINMKGLDGIQGPMYVGT  584 (1015)
Q Consensus       505 ngp~Il~lDcD~~~~~~~~Lr~amcff~Dp~~g~~va~VQ~PQ~F~nid~~D~y~n~~~vFfdi~~~gldg~qgp~yvGT  584 (1015)
                      |||||||||||||+|||+++|+||||||||+.|+++|||||||+|+|+|++|||+|++++|||++|+|+||+|||+|+||
T Consensus       557 NaP~ILNlDCDmY~Nns~a~r~AMCf~lD~~~g~~~afVQFPQrF~gi~~~D~Y~n~~~vffdi~~~GldGlqGP~YvGT  636 (1085)
T PLN02400        557 NGAYLLNVDCDHYFNNSKALKEAMCFMMDPAIGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINLKGLDGIQGPVYVGT  636 (1085)
T ss_pred             CCceEEecccccccCCchhHHhhhhheeccCCCceeEEEeCCcccCCCCCCCCcccceeEEeeccccccccCCCcccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccchhhhhhcCCCCCccCCCCCCCCCCCCCCcccchhhhccchhh------HHH-----Hhhh-------hcchhhhhhh
Q 039678          585 GCVFRRQALYGHEPPKAAKRPRMGTCGCCPCFRRQKQYQKNSKAN------VIR-----EAAN-------LEGMEENKEH  646 (1015)
Q Consensus       585 GcvfRR~ALyG~~p~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~------~~~-----~~~~-------~~~~~~~~~~  646 (1015)
                      ||+|||+||||++||..++.... ...|++||+.|++.++++.+.      .++     .+++       +++++++++.
T Consensus       637 GC~frR~aLYG~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  715 (1085)
T PLN02400        637 GCCFNRQALYGYDPVLTEEDLEP-NIIVKSCCGSRKKGKGSKKYNIDKKRAMKRTESNVPIFNMEDIEEGVEGYDDERSL  715 (1085)
T ss_pred             CcceeeeeeccCCCccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccchhhh
Confidence            99999999999999865432111 123455777666543221110      010     1222       3456667778


Q ss_pred             hhhhhhhhhhcCchhhhHhhhhhhhCCCCCCCchHHHHHHHHHhhcccccccCccccccccccccccchHHHHHHHHhCC
Q 039678          647 LLSQMNSERKFGQSAIFVTSTLVEQGGVPASSSREALLKEAIHVMSCDYEDKTEWGTELGWIYGSVTEDILTGFKLHSRG  726 (1015)
Q Consensus       647 ~~~~~~~~~~fG~s~~f~~S~l~e~GG~p~~~~~~~~~~ea~~v~sc~YE~~T~WG~evGw~ygsvTED~~tg~rL~~~G  726 (1015)
                      .+++++++++||+|++|++|++++.||.+...+++++++||+|||||+||++|+||+||||+|+|+|||+.||++||++|
T Consensus       716 ~~~~~~l~~~fG~S~~fi~S~~~~~~~~~~~~~~~~ll~eA~~V~sC~YE~~T~WG~evGwiYGSvTED~~TG~~LH~rG  795 (1085)
T PLN02400        716 LMSQKSLEKRFGQSPVFIAATFMEQGGIPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARG  795 (1085)
T ss_pred             hhhhhhhhhhccccHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhhccCCccCCchhhhhCeeccceechHHHHHHHHccC
Confidence            89999999999999999999999999999888999999999999999999999999999999999999999999999999


Q ss_pred             cEEEEecCCCCcccccCCCCHHHHHHHhHHhhccchhHhhhcCCcccccccCCCCChhhhHHhhhhhhhhhhhHHHHHHH
Q 039678          727 WRSIYCMPKRSAFKGSAPINLSDRLNQALRWALGSVEIFFSRHNPICYGCKEGKIKFLERFAYINTTIYPFTSIPLLAYC  806 (1015)
Q Consensus       727 wrsvY~~~~~~af~G~aP~tl~~~l~QR~RWA~G~lQil~sk~~Pl~~g~~~~~L~l~QRL~Yl~~~ly~l~sl~~liyl  806 (1015)
                      |||+|++|++++|.|+||+|+.+++.||+|||+|++||+++++||+++|+. ++|+++||++|+++++||++++++++|+
T Consensus       796 WrSvY~~p~r~af~GlAP~~l~d~L~Qr~RWA~G~lqI~~sr~nPl~~G~~-~~L~l~QRL~Yl~~~~y~~~slp~liY~  874 (1085)
T PLN02400        796 WISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYN-GRLKLLERLAYINTIVYPITSIPLLAYC  874 (1085)
T ss_pred             CceEecCCCcHhhcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccC-CCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999998764 4699999999999999999999999999


Q ss_pred             HHHHHHHHhCCCccccchHHHHHHHHHHHHHHHHHHHHHHHhcCcccchhcccchhhhhhhHHHHHHHHHHHHHHHHcCC
Q 039678          807 LLPAICLLTDKFIMPEMSAFSGLLLVALFVSFFASGILELRWSGVTIEEWWRNEQFWVIGGISSHLFAVFQGLAKILTKN  886 (1015)
Q Consensus       807 llP~l~LltG~~i~p~~s~~~~~~fl~lfls~~~~~~Le~rw~g~si~~wWrneqfW~I~~~sa~l~av~~allk~L~g~  886 (1015)
                      ++|++||++|++++|.++++++++|+++|++++++++||++|+|+++++||||||||+|+++|+++||++++++|+|+++
T Consensus       875 llP~l~LltG~~i~P~vs~~~~~~fi~lf~~~~~~~lLE~~~sG~si~~WWrnQq~w~I~~~Sa~Lfavl~~ilKvLgg~  954 (1085)
T PLN02400        875 VLPAFCLITNKFIIPEISNYASMWFILLFISIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGI  954 (1085)
T ss_pred             HHHHHHHHcCCccCCccchHHHHHHHHHHHHHHHHHHHHHhhcCccHHHhhhccceeeehhhHHHHHHHHHHHHHHhcCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCceeCcCCCCC-cccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCcccchhhHHHHHHHHHHHHHHHHHHH
Q 039678          887 DTIFTVTFKLFDD-KEDKELYNFKWTALLIPPTTVLIINLVGIVAGITDAINTGYEAMRPLIGKLFFVFWVISHLYPFLK  965 (1015)
Q Consensus       887 ~~~F~VTpK~~~~-~~~~~ly~f~ws~l~iP~~~LlllnLiaiv~Gi~~~i~~~~~~w~~l~g~lf~~~Wvi~~l~Pfl~  965 (1015)
                      +++|.||+|..++ +.+.++|+|+||+|++|+++++++|++|+++|+++++++++++|+++++++||++||++|+|||+|
T Consensus       955 ~~~F~VTsK~~d~~~~~~ely~f~~s~L~iP~ttl~llNlvaiv~Gv~~~i~~g~~~~g~l~~~~~~~~wvvv~l~Pf~k 1034 (1085)
T PLN02400        955 DTNFTVTSKASDEDGDFAELYVFKWTSLLIPPTTVLLVNLVGIVAGVSYAINSGYQSWGPLFGKLFFAIWVIAHLYPFLK 1034 (1085)
T ss_pred             cccceecCCcccccccccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999998764 457899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhcCCCCcchhHHHHHHHHHHHHHHhheeeccCccccCCC-CCcccCCCC
Q 039678          966 GLMGRQNRTPTIVVIWSILLASIFSLVWMRIDPFVIRARGP-DPKQCGINC 1015 (1015)
Q Consensus       966 gL~gR~~r~P~~v~~~s~~la~~~~~l~v~i~~~~~~~~~~-~~~~~~~~~ 1015 (1015)
                      |||||++|+|+||++||++||++||||||+|+||+++++|| ++++|||||
T Consensus      1035 gL~gR~~r~P~~v~~~s~lla~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~ 1085 (1085)
T PLN02400       1035 GLLGRQNRTPTIVIVWSILLASIFSLLWVRIDPFVSDTTKAAANGQCGVNC 1085 (1085)
T ss_pred             HHhccCCCCceeHHHHHHHHHHHHHHHheeccccccCCCCchhHhhcCcCC
Confidence            99999999999999999999999999999999999999999 899999999

>PLN02436 cellulose synthase A Back     alignment and domain information
>PLN02189 cellulose synthase Back     alignment and domain information
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>PLN02195 cellulose synthase A Back     alignment and domain information
>PLN02248 cellulose synthase-like protein Back     alignment and domain information
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals Back     alignment and domain information
>PLN02190 cellulose synthase-like protein Back     alignment and domain information
>PLN02893 Cellulose synthase-like protein Back     alignment and domain information
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional Back     alignment and domain information
>PF14569 zf-UDP: Zinc-binding RING-finger; PDB: 1WEO_A Back     alignment and domain information
>PRK05454 glucosyltransferase MdoH; Provisional Back     alignment and domain information
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan Back     alignment and domain information
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK14583 hmsR N-glycosyltransferase; Provisional Back     alignment and domain information
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 Back     alignment and domain information
>PRK11204 N-glycosyltransferase; Provisional Back     alignment and domain information
>PRK14716 bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex Back     alignment and domain information
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily Back     alignment and domain information
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase Back     alignment and domain information
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A Back     alignment and domain information
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI Back     alignment and domain information
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin Back     alignment and domain information
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis Back     alignment and domain information
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan Back     alignment and domain information
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily Back     alignment and domain information
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB Back     alignment and domain information
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan Back     alignment and domain information
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2 Back     alignment and domain information
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine Back     alignment and domain information
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis Back     alignment and domain information
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis Back     alignment and domain information
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis Back     alignment and domain information
>PF13506 Glyco_transf_21: Glycosyl transferase family 21 Back     alignment and domain information
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis Back     alignment and domain information
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans Back     alignment and domain information
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function Back     alignment and domain information
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2 Back     alignment and domain information
>PF14570 zf-RING_4: RING/Ubox like zinc-binding domain; PDB: 1E4U_A 1UR6_B Back     alignment and domain information
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase Back     alignment and domain information
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase Back     alignment and domain information
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine Back     alignment and domain information
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1 Back     alignment and domain information
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily Back     alignment and domain information
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase Back     alignment and domain information
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation Back     alignment and domain information
>PRK10073 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily Back     alignment and domain information
>TIGR01556 rhamnosyltran L-rhamnosyltransferase Back     alignment and domain information
>PRK10018 putative glycosyl transferase; Provisional Back     alignment and domain information
>PRK10063 putative glycosyl transferase; Provisional Back     alignment and domain information
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold Back     alignment and domain information
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 Back     alignment and domain information
>COG1216 Predicted glycosyltransferases [General function prediction only] Back     alignment and domain information
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ] Back     alignment and domain information
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional Back     alignment and domain information
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional Back     alignment and domain information
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional Back     alignment and domain information
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide Back     alignment and domain information
>COG5175 MOT2 Transcriptional repressor [Transcription] Back     alignment and domain information
>PF14446 Prok-RING_1: Prokaryotic RING finger family 1 Back     alignment and domain information
>TIGR00570 cdk7 CDK-activating kinase assembly factor MAT1 Back     alignment and domain information
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides Back     alignment and domain information
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only] Back     alignment and domain information
>cd00162 RING RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in mediating protein-protein interactions; identified in a proteins with a wide range of functions such as viral replication, signal transduction, and development; has two variants, the C3HC4-type and a C3H2C3-type (RING-H2 finger), which have different cysteine/histidine pattern; a subset of RINGs are associated with B-Boxes (C-X2-H-X7-C-X7-C-X2-C-H-X2-H) Back     alignment and domain information
>PF05290 Baculo_IE-1: Baculovirus immediate-early protein (IE-0); InterPro: IPR007954 This entry contains the Baculovirus immediate-early protein IE-0 Back     alignment and domain information
>KOG2977 consensus Glycosyltransferase [General function prediction only] Back     alignment and domain information
>smart00504 Ubox Modified RING finger domain Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1015
1weo_A93 Solution Structure Of Ring-Finger In The Catalytic 2e-29
4hg6_A 802 Structure Of A Cellulose Synthase - Cellulose Trans 7e-06
>pdb|1WEO|A Chain A, Solution Structure Of Ring-Finger In The Catalytic Subunit (Irx3) Of Cellulose Synthase Length = 93 Back     alignment and structure 
Iteration: 1

 Score =  128 bits (321), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 56/70 (80%), Positives = 61/70 (87%)
Query: 26 PKPWKSLDGQVCEICGDEIGKMANGDLFLACEECGFPVCRPCYEYERREGTQLCPQCKTR 85
          PKP K+LDGQ CEICGD+IG    GDLF+AC ECGFP CRPCYEYERREGTQ CPQCKTR
Sbjct: 8  PKPLKNLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTR 67
Query: 86 YKRIKGSPRV 95
          YKR++GSPRV
Sbjct: 68 YKRLRGSPRV 77
>pdb|4HG6|A Chain A, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate Length = 802 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1015
1weo_A93 Cellulose synthase, catalytic subunit (IRX3); stru 3e-42
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
1e4u_A78 Transcriptional repressor NOT4; gene regulation, t 7e-08
1wev_A88 Riken cDNA 1110020M19; structural genomics, PHD do 9e-04
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1 Length = 93 Back     alignment and structure
 Score =  148 bits (374), Expect = 3e-42
 Identities = 65/88 (73%), Positives = 70/88 (79%)

Query: 23  HEEPKPWKSLDGQVCEICGDEIGKMANGDLFLACEECGFPVCRPCYEYERREGTQLCPQC 82
              PKP K+LDGQ CEICGD+IG    GDLF+AC ECGFP CRPCYEYERREGTQ CPQC
Sbjct: 5   SSGPKPLKNLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQC 64

Query: 83  KTRYKRIKGSPRVEGDADEEDIDDIEHE 110
           KTRYKR++GSPRVEGD DEEDID     
Sbjct: 65  KTRYKRLRGSPRVEGDEDEEDIDSGPSS 92
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B Length = 78 Back     alignment and structure
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2 Length = 88 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1015
4hg6_A 802 Cellulose synthase subunit A; membrane translocati 100.0
1weo_A93 Cellulose synthase, catalytic subunit (IRX3); stru 100.0
2z86_A625 Chondroitin synthase; GT-A, glycosyltransferase A, 99.54
1xhb_A472 Polypeptide N-acetylgalactosaminyltransferase 1; g 99.5
2d7i_A570 Polypeptide N-acetylgalactosaminyltransferase 10; 99.44
3bcv_A240 Putative glycosyltransferase protein; protein stru 99.43
1qg8_A255 Protein (spore coat polysaccharide biosynthesis P 99.41
2ffu_A501 Ppgalnact-2, polypeptide N-acetylgalactosaminyltra 99.37
2z86_A625 Chondroitin synthase; GT-A, glycosyltransferase A, 99.31
3ckj_A329 Putative uncharacterized protein; mycobacteria, un 98.99
4fix_A657 UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 98.95
3l7i_A 729 Teichoic acid biosynthesis protein F; GT-B fold, m 98.9
2fy7_A287 Beta-1,4-galactosyltransferase 1; M339H mutant, AP 98.62
3f1y_A387 Mannosyl-3-phosphoglycerate synthase; GT-A type gl 98.16
2nxv_A249 ATP synthase subunits region ORF 6; majastridin, A 97.89
1e4u_A78 Transcriptional repressor NOT4; gene regulation, t 96.73
1fo8_A343 Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetyl 96.17
2bo4_A397 Mannosylglycerate synthase; catalysis, glycosyltra 95.94
2zu9_A394 Mannosyl-3-phosphoglycerate synthase; GT-A fold, g 95.09
2wvl_A391 Mannosyl-3-phosphoglycerate synthase; GT-A fold, t 92.42
2d8s_A80 Cellular modulator of immune recognition; C-MIR, m 89.53
1vyx_A60 ORF K3, K3RING; zinc-binding protein, ring domain, 88.49
2ea6_A69 Ring finger protein 4; RNF4, RES4-26, ring domain, 88.04
2csz_A76 Synaptotagmin-like protein 4; exophilin 2, granuph 86.6
3ng2_A71 RNF4, snurf, ring finger protein 4; ring domain, E 86.38
1g25_A65 CDK-activating kinase assembly factor MAT1; ring f 86.03
2ect_A78 Ring finger protein 126; metal binding protein, st 84.82
2xeu_A64 Ring finger protein 4; transcription, zinc-finger, 84.7
1t1h_A78 Gspef-atpub14, armadillo repeat containing protein 83.91
1iym_A55 EL5; ring-H2 finger, ubiquitin ligase, DNA binding 82.95
2ckl_B165 Ubiquitin ligase protein RING2; BMI1, RING1B, poly 82.67
2ecm_A55 Ring finger and CHY zinc finger domain- containing 81.5
2ysl_A73 Tripartite motif-containing protein 31; ring-type 81.32
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides} Back     alignment and structure
Probab=100.00  E-value=1e-50  Score=497.39  Aligned_cols=491  Identities=22%  Similarity=0.344  Sum_probs=376.5

Q ss_pred             hHH-HHHHHHHHHHHHHHHhhccCCCc-----hhHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHhhhhhcCCC
Q 039678          226 YRM-VVAARLVIMVLFLQYRIMNPVND-----AVGLWLTSVICEIWFGFSWILDQFPKWLPIQRETYLERLSIRYEREGE  299 (1015)
Q Consensus       226 yR~-~i~~~l~~l~~yl~wRi~~~~~~-----~~~~Wl~~~~~E~~f~~~wil~~~~kw~Pv~R~~~~drL~~r~~~~~~  299 (1015)
                      .|+ ++++.+++.++|++||++.+++.     ..++|++++++|+++.+.|++..+..++|..|...++         ..
T Consensus        65 ~~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~~~~~~~~r~~~~~---------~~  135 (802)
T 4hg6_A           65 PRFLLLSAASMLVMRYWFWRLFETLPPPALDASFLFALLLFAVETFSISIFFLNGFLSADPTDRPFPRP---------LQ  135 (802)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCCCC---------CC
T ss_pred             hHHHHHHHHHHHHHHHHHHHhheecCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCC---------CC
Confidence            344 56677778899999999987653     2467888999999999999999999999998875422         23


Q ss_pred             CCCCCCeEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCcEEEEecCCCCchhhhhhhhHHHhhhhhhhhhhhcCCCCC
Q 039678          300 PNMLAPVDIFVTTVDPMKEPPLVTANTILSVLAMDYPVDKISCYISDDGASLLSFESLSETADFARKWVPFCKKYSIEPR  379 (1015)
Q Consensus       300 ~~~lP~VDvfV~T~dP~kEpp~v~~nTvls~la~DYP~~kl~~yvsDDG~s~~T~~al~Eaa~FA~~WvPFCkk~~iepR  379 (1015)
                      ++++|.|+|+|||||   |++.++.+|+.|++++|||.+++.|+|+|||+++-|.+.                       
T Consensus       136 ~~~~P~VSViIPtyN---e~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~-----------------------  189 (802)
T 4hg6_A          136 PEELPTVDILVPSYN---EPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMS-----------------------  189 (802)
T ss_dssp             TTTCCCEEEEEECTT---CCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTC-----------------------
T ss_pred             ccCCCcEEEEEEECC---CCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCcccccc-----------------------
Confidence            567999999999999   999999999999999999999999999999999866542                       


Q ss_pred             CcccccccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcccccccCCCCCCCCCCCCCcchhheeccC
Q 039678          380 APEMYFSQKVDYLKDKVQPAFVKERRAMKREYEEFKVRMNALVAKSRMIPQDGWIMQDGTPWPGNNTQDHPGMIQVFLGR  459 (1015)
Q Consensus       380 ~Pe~yFs~~~d~~~~~~~~~f~~err~mkr~Yee~k~ri~~l~~~~~~vp~~~w~m~dgt~w~~~~~~dHp~iiqv~~~~  459 (1015)
                                      .+|+.+++..+   .+++    ++.++++                                   
T Consensus       190 ----------------~d~~i~~~~~~---~~~~----l~~~~~~-----------------------------------  211 (802)
T 4hg6_A          190 ----------------PDPELAQKAQE---RRRE----LQQLCRE-----------------------------------  211 (802)
T ss_dssp             ----------------SSHHHHHHHHH---HHHH----HHHHHHH-----------------------------------
T ss_pred             ----------------CCHHHHHHHHh---hhHH----HHHHHHh-----------------------------------
Confidence                            11222222211   1112    1222110                                   


Q ss_pred             CCCCCCCCCCCCcEEEEecCCCCCCCCCCchhhhHHHHHHhccccCceEEEEecCCCCCCchHHHHHHHHhh-cCCCCCc
Q 039678          460 EGGHDAEGNELPNLVYVSREKRPAFPHNKRAGAMNALVRVSGVLTNSSFILNLDCDHYVNNSKAVREAMCFL-MDPQTGK  538 (1015)
Q Consensus       460 ~g~~d~~~~~lP~lvYvsRekrPg~~hh~KAGALNallrvSavltngp~Il~lDcD~~~~~~~~Lr~amcff-~Dp~~g~  538 (1015)
                                 .++.|+.|++    ++++||||+|.+++.    ++++||+++|||+++ .|++|++++.+| .||    
T Consensus       212 -----------~~v~~i~~~~----~~~GKa~alN~gl~~----a~gd~Il~lDaD~~~-~pd~L~~lv~~~~~dp----  267 (802)
T 4hg6_A          212 -----------LGVVYSTRER----NEHAKAGNMSAALER----LKGELVVVFDADHVP-SRDFLARTVGYFVEDP----  267 (802)
T ss_dssp             -----------HTCEEEECSS----CCSHHHHHHHHHHHH----CCCSEEEECCTTEEE-CTTHHHHHHHHHHHSS----
T ss_pred             -----------cCcEEEEecC----CCCcchHHHHHHHHh----cCCCEEEEECCCCCc-ChHHHHHHHHHHhcCC----
Confidence                       0378899988    677899999999997    689999999999995 899999999998 588    


Q ss_pred             ceEEEecCccccCCCcc-------cchhhhHHHhhhhhhccccccCCccccccccchhhhhhcCCCCCccCCCCCCCCCC
Q 039678          539 RVCYVQFPQRFDGIDKS-------DRYSNRNRVFFDINMKGLDGIQGPMYVGTGCVFRRQALYGHEPPKAAKRPRMGTCG  611 (1015)
Q Consensus       539 ~va~VQ~PQ~F~nid~~-------D~y~n~~~vFfdi~~~gldg~qgp~yvGTGcvfRR~ALyG~~p~~~~~~~~~~~~~  611 (1015)
                      ++++||+|+.+.|.++.       .++.+++..|+...+.+.+.+++++++|++++|||+++                  
T Consensus       268 ~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al------------------  329 (802)
T 4hg6_A          268 DLFLVQTPHFFINPDPIQRNLALGDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRAL------------------  329 (802)
T ss_dssp             SCCEEECCCCBSSCCHHHHHHTCCTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHH------------------
T ss_pred             CeEEEeccEEEeCCchHhhhhhHHhhhhHHHHHHHHHHHhhHhhcCCceecccchhhhHHHH------------------
Confidence            79999999999987642       44566778899999999999999999999999999887                  


Q ss_pred             CCCCcccchhhhccchhhHHHHhhhhcchhhhhhhhhhhhhhhhhcCchhhhHhhhhhhhCCCCCCCchHHHHHHHHHhh
Q 039678          612 CCPCFRRQKQYQKNSKANVIREAANLEGMEENKEHLLSQMNSERKFGQSAIFVTSTLVEQGGVPASSSREALLKEAIHVM  691 (1015)
Q Consensus       612 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~GG~p~~~~~~~~~~ea~~v~  691 (1015)
                                                                               ++.||+++               
T Consensus       330 ---------------------------------------------------------~~vGgf~~---------------  337 (802)
T 4hg6_A          330 ---------------------------------------------------------DEAGGFAG---------------  337 (802)
T ss_dssp             ---------------------------------------------------------HHHTTCCC---------------
T ss_pred             ---------------------------------------------------------HHcCCcCC---------------
Confidence                                                                     24676554               


Q ss_pred             cccccccCccccccccccccccchHHHHHHHHhCCcEEEEecCCCCcccccCCCCHHHHHHHhHHhhccchhHhhhcCCc
Q 039678          692 SCDYEDKTEWGTELGWIYGSVTEDILTGFKLHSRGWRSIYCMPKRSAFKGSAPINLSDRLNQALRWALGSVEIFFSRHNP  771 (1015)
Q Consensus       692 sc~YE~~T~WG~evGw~ygsvTED~~tg~rL~~~GwrsvY~~~~~~af~G~aP~tl~~~l~QR~RWA~G~lQil~sk~~P  771 (1015)
                                        ++++||.+++++++++||+++|++++..  ++.+|+|+.++++||.||++|.+|+++. ++|
T Consensus       338 ------------------~~~~ED~~l~~rl~~~G~ri~~~~~~~~--~~~~p~t~~~~~~Qr~RW~~G~~q~l~~-~~p  396 (802)
T 4hg6_A          338 ------------------ETITEDAETALEIHSRGWKSLYIDRAMI--AGLQPETFASFIQQRGRWATGMMQMLLL-KNP  396 (802)
T ss_dssp             ------------------SSSSHHHHHHHHHHTTTCCEEECCCCCE--EECCCCSHHHHHHHHHHHHHHHHHHHHH-SCT
T ss_pred             ------------------CCcchHHHHHHHHHHcCCeEEEecCCEE--EecCCCCHHHHHHHHHHHHccHHHHHHH-hCc
Confidence                              5789999999999999999999977654  8999999999999999999999999995 577


Q ss_pred             ccccccCCCCChhhhHHhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCccccchHHHHHHHHHHHH-HHHHHHHHHHHhcC
Q 039678          772 ICYGCKEGKIKFLERFAYINTTIYPFTSIPLLAYCLLPAICLLTDKFIMPEMSAFSGLLLVALFV-SFFASGILELRWSG  850 (1015)
Q Consensus       772 l~~g~~~~~L~l~QRL~Yl~~~ly~l~sl~~liylllP~l~LltG~~i~p~~s~~~~~~fl~lfl-s~~~~~~Le~rw~g  850 (1015)
                      ++    .+++++.||++|+...++++.+++.++++++|++++++|..++......+..+++..++ .+.+..   ..+.+
T Consensus       397 l~----~~~l~~~~rl~~l~~~~~~~~~~~~li~ll~p~~~ll~~~~~~~~~~~~~~~~~lp~~l~~~~~~~---~~~~~  469 (802)
T 4hg6_A          397 LF----RRGLGIAQRLCYLNSMSFWFFPLVRMMFLVAPLIYLFFGIEIFVATFEEVLAYMPGYLAVSFLVQN---ALFAR  469 (802)
T ss_dssp             TS----CSSCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHCCCCSCCCHHHHHHHHHHHHHHHHHHHH---HHHTT
T ss_pred             cc----cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHHHH---HHhcC
Confidence            76    46799999999999999999999999999999999999988877644333322222221 122111   12222


Q ss_pred             cccchhcccchhhhhhhHHHHHHHHHHHHHH-HHcCCCCCceeCcCCCCCcccccccccccchhhHHHHHHHHHHHHHHH
Q 039678          851 VTIEEWWRNEQFWVIGGISSHLFAVFQGLAK-ILTKNDTIFTVTFKLFDDKEDKELYNFKWTALLIPPTTVLIINLVGIV  929 (1015)
Q Consensus       851 ~si~~wWrneqfW~I~~~sa~l~av~~allk-~L~g~~~~F~VTpK~~~~~~~~~ly~f~ws~l~iP~~~LlllnLiaiv  929 (1015)
                      .. -.|| ++.++.+    ..++ .+.+++. .+++++.+|.||+|+...+..   + + + .+++|+++++++++++++
T Consensus       470 ~r-~~~~-~~l~~~~----~~~~-~~~a~l~~l~~~~~~~f~VT~Kg~~~~~~---~-~-~-~~~~p~~~~~~l~~~~~~  536 (802)
T 4hg6_A          470 QR-WPLV-SEVYEVA----QAPY-LARAIVTTLLRPRSARFAVTAKDETLSEN---Y-I-S-PIYRPLLFTFLLCLSGVL  536 (802)
T ss_dssp             TS-CTTH-HHHHHHH----HHHH-HHHHHHHHHHSTTCCCCCCCCCCCCCSSC---C-B-C-TTCHHHHHHHHHHHHHHH
T ss_pred             cH-HHHH-HHHHHHH----HHHH-HHHHHHHHHhCCCCCcceECCCCcccccc---c-h-h-hHHHHHHHHHHHHHHHHH
Confidence            21 1122 2222222    1122 2344443 356788999999999764332   1 2 2 578899999999999999


Q ss_pred             HHHHHHHhcCcccchhhHHHHHHHHHHHHHHHHHHHHhh
Q 039678          930 AGITDAINTGYEAMRPLIGKLFFVFWVISHLYPFLKGLM  968 (1015)
Q Consensus       930 ~Gi~~~i~~~~~~w~~l~g~lf~~~Wvi~~l~Pfl~gL~  968 (1015)
                      +|+++.....+    +..+.+++++|+++|++...-++.
T Consensus       537 ~~~~~~~~~~~----~~~~~~~~~~w~~~~l~~l~~~~~  571 (802)
T 4hg6_A          537 ATLVRWVAFPG----DRSVLLVVGGWAVLNVLLVGFALR  571 (802)
T ss_dssp             HHHHHHHHCGG----GHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHhccCC----ccchhhhhhHHHHHHHHHHHHHHH
Confidence            99999875433    345678999999999998887765
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1 Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Back     alignment and structure
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Back     alignment and structure
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis} Back     alignment and structure
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* Back     alignment and structure
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A Back     alignment and structure
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* Back     alignment and structure
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* Back     alignment and structure
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ... Back     alignment and structure
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A* Back     alignment and structure
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A* Back     alignment and structure
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B Back     alignment and structure
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A* Back     alignment and structure
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A* Back     alignment and structure
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A* Back     alignment and structure
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A* Back     alignment and structure
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3 Back     alignment and structure
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2csz_A Synaptotagmin-like protein 4; exophilin 2, granuphilin, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus} Back     alignment and structure
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1 Back     alignment and structure
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Back     alignment and structure
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens} Back     alignment and structure
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2 Back     alignment and structure
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1 Back     alignment and structure
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B Back     alignment and structure
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A Back     alignment and structure
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 1015
d1weoa_93 g.44.1.1 (A:) Cellulose synthase A catalytic subun 8e-48
d1g25a_65 g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapi 6e-05
d1weva_88 g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus mu 0.001
>d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 93 Back     information, alignment and structure

class: Small proteins
fold: RING/U-box
superfamily: RING/U-box
family: RING finger domain, C3HC4
domain: Cellulose synthase A catalytic subunit 7, IRX3
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  162 bits (412), Expect = 8e-48
 Identities = 65/84 (77%), Positives = 70/84 (83%)

Query: 23  HEEPKPWKSLDGQVCEICGDEIGKMANGDLFLACEECGFPVCRPCYEYERREGTQLCPQC 82
              PKP K+LDGQ CEICGD+IG    GDLF+AC ECGFP CRPCYEYERREGTQ CPQC
Sbjct: 5   SSGPKPLKNLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQC 64

Query: 83  KTRYKRIKGSPRVEGDADEEDIDD 106
           KTRYKR++GSPRVEGD DEEDID 
Sbjct: 65  KTRYKRLRGSPRVEGDEDEEDIDS 88
>d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]} Length = 65 Back     information, alignment and structure
>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]} Length = 88 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1015
d1weoa_93 Cellulose synthase A catalytic subunit 7, IRX3 {Th 100.0
d1xhba2328 Polypeptide N-acetylgalactosaminyltransferase 1, N 99.47
d1qg8a_255 Spore coat polysaccharide biosynthesis protein Sps 99.02
d1omza_265 Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga 98.66
d1ur6b_52 Not-4 N-terminal RING finger domain {Human (Homo s 96.19
d1g25a_65 TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9 95.42
d2bo4a1381 Mannosylglycerate synthase, MGS {Rhodothermus mari 94.92
d1vyxa_60 IE1B protein (ORF K3), N-terminal domain {Kaposi's 94.4
d1chca_68 Immediate early protein, IEEHV {Equine herpesvirus 91.28
>d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: Small proteins
fold: RING/U-box
superfamily: RING/U-box
family: RING finger domain, C3HC4
domain: Cellulose synthase A catalytic subunit 7, IRX3
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=9.5e-44  Score=312.15  Aligned_cols=84  Identities=77%  Similarity=1.493  Sum_probs=80.8

Q ss_pred             CCCCCCCCCCCCccccccCccccccCCCCeeeccCCCCCccchhhhHHHHhhCCCCCCCCccccccccCCCCcCCCCCcc
Q 039678           23 HEEPKPWKSLDGQVCEICGDEIGKMANGDLFLACEECGFPVCRPCYEYERREGTQLCPQCKTRYKRIKGSPRVEGDADEE  102 (1015)
Q Consensus        23 ~~~~~~~~~~~~~~c~~c~~~vg~~~~g~~f~ac~ec~fpvCr~Cyeyer~eG~~~Cp~Ckt~ykr~kgsp~v~gd~~e~  102 (1015)
                      +..+||++++++|+||||||+||+++|||+|||||||+|||||||||||||||+|+|||||||||||||||||+||++||
T Consensus         5 ~~g~kp~~~~~~q~CqiCGd~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCkt~Ykr~kgsprv~gDe~e~   84 (93)
T d1weoa_           5 SSGPKPLKNLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYKRLRGSPRVEGDEDEE   84 (93)
T ss_dssp             SSSSSCCSCCSSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCCCCTTCCCCTTSCCCC
T ss_pred             CCCCCChhhcccchhhhcccccccCCCCCEEEEecccCCccchHHHHHHHhccCccCcccCChhhhhcCCCCCCCCcccc
Confidence            34489999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccc
Q 039678          103 DIDD  106 (1015)
Q Consensus       103 ~~~~  106 (1015)
                      ++||
T Consensus        85 ~~d~   88 (93)
T d1weoa_          85 DIDS   88 (93)
T ss_dssp             CSCC
T ss_pred             cccc
Confidence            8875
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1ur6b_ g.44.1.1 (B:) Not-4 N-terminal RING finger domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} Back     information, alignment and structure
>d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain {Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8 [TaxId: 37296]} Back     information, alignment and structure
>d1chca_ g.44.1.1 (A:) Immediate early protein, IEEHV {Equine herpesvirus 1 [TaxId: 10326]} Back     information, alignment and structure