Citrus Sinensis ID: 039710

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-
IVMPELQISVRLPVLDLSQPVSPSFLSSLSEACQEWGFFYVTNHGISQDMFKKVCSFSKRMFSSPTDTKLKLGPSSCIKTYTPHFIASPYFESLRVSGPDYFAAAKASACVLFGQQSSDFSELLQEYGIKMVELSQRISKIILMSLGGDYERKFYESEFGKCQGYLRIINYTPPETVKEDKELEGLGMHTDMSCLTLVYQDEIGGLQMRSKEGEWIDIFPCENSLVVNVGDLMQAWSNGRLRSSEHRVVLKRFINRLSLAFFWGFEDEKVIRAPDEVVGEGCSRIYKPFVCLDYLKFRENNDEGKFERIAHTVNDFAGIKQKGGMASVLEF
cccccccccccccEEEccccccHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHcccccEEEccccccccccccccccccccccccccccEEEEEcccccEEEEcccccEEEcccccccEEEEHHHHHHHHHcccccccccEEEccccccEEEEEEEEccccccEEEccccccccccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccccc
cccccccccccccEEEcccccHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHcccccccccccEEEccccccEEEEEccccccccccccHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHccccccEEEEcccccccccccccHHcccccccccccEEEEEccccccEEEEEEcccEEEccccccEEEEEEccHHHHHcccccccEEEEEEEEccccEEEEEEEEccccccEEcccHHHcccccccccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccEEEEEc
ivmpelqisvrlpvldlsqpvspsFLSSLSEACQEWGFFYVtnhgisqdMFKKVCSFskrmfssptdtklklgpssciktytphfiaspyfeslrvsgpdYFAAAKASACVLFGQQSSDFSELLQEYGIKMVELSQRISKIILMSLggdyerkfyesefgkcqgylriinytppetvkedkeleglgmhtdmscLTLVYQDEigglqmrskegewidifpcenslvvNVGDLMQAwsngrlrssEHRVVLKRFINRLSLAFfwgfedekvirapdevvgegcsriykpfvcldylkfrenndegkFERIAHTVNDfagikqkggmasvlef
ivmpelqisvrlpvldlsQPVSPSFLSSLSEACQEWGFFYVTNHGISQDMFKKVCSFSKRMFssptdtklklgpsSCIKTYTPHFIASPYFESLRVSGPDYFAAAKASACVLFGQQSSDFSELLQEYGIKMVELSQRISKIILMSLGGDYERKFYESEFGKCQGYLRIINYTPPETVKEDKELEGLGMHTDMSCLTLVYQDEIGGLQMRSKEGEWIDIFPCENSLVVNVGDLMQAWSNGRLRSSEHRVVLKRFINRLSLAFfwgfedekvirapdevvgegcsRIYKPFVCLDYLKFRENNDEGKFERIAHTVNDfagikqkggmasvlef
IVMPELQISVRLPVLDLSQPVSPSFLSSLSEACQEWGFFYVTNHGISQDMFKKVCSFSKRMFSSPTDTKLKLGPSSCIKTYTPHFIASPYFESLRVSGPDYFAAAKASACVLFGQQSSDFSELLQEYGIKMVELSQRISKIILMSLGGDYERKFYESEFGKCQGYLRIINYTPPETVKEDKELEGLGMHTDMSCLTLVYQDEIGGLQMRSKEGEWIDIFPCENSLVVNVGDLMQAWSNGRLRSSEHRVVLKRFINRLSLAFFWGFEDEKVIRAPDEVVGEGCSRIYKPFVCLDYLKFRENNDEGKFERIAHTVNDFAGIKQKGGMASVLEF
*********VRLPVLDLS****PSFLSSLSEACQEWGFFYVTNHGISQDMFKKVCSFSKRMFS****TKLKLGPSSCIKTYTPHFIASPYFESLRVSGPDYFAAAKASACVLFGQQSSDFSELLQEYGIKMVELSQRISKIILMSLGGDYERKFYESEFGKCQGYLRIINYTPPETVKEDKELEGLGMHTDMSCLTLVYQDEIGGLQMRSKEGEWIDIFPCENSLVVNVGDLMQAWSNGRLRSSEHRVVLKRFINRLSLAFFWGFEDEKVIRAPDEVVGEGCSRIYKPFVCLDYLKFRENNDEGKFERIAHTVNDFAGI************
*******ISVRLPVLDLSQPVSPSFLSSLSEACQEWGFFYVTNHGISQDMFKKVCSFSKRMFSSPTDT****************FIASPYFESLRVSGPDYFAAAKASACVLFGQQSSDFSELLQEYGIKMVELSQRISKIILMSLGGDYERKFYESEFGKCQGYLRIINYTPPETVKEDKELEGLGMHTDMSCLTLVYQDEIGGLQMRSKEGEWIDIFPCENSLVVNVGDLMQAWSNGRLRSSEHRVVLKRFINRLSLAFFWGFEDEKVIRAPDEVVGEGCSRIYKPFVCLDYLKFRENNDE*KFERIAHTVNDFAGIKQKG********
IVMPELQISVRLPVLDLSQPVSPSFLSSLSEACQEWGFFYVTNHGISQDMFKKVCSFSKRMFSSPTDTKLKLGPSSCIKTYTPHFIASPYFESLRVSGPDYFAAAKASACVLFGQQSSDFSELLQEYGIKMVELSQRISKIILMSLGGDYERKFYESEFGKCQGYLRIINYTPPETVKEDKELEGLGMHTDMSCLTLVYQDEIGGLQMRSKEGEWIDIFPCENSLVVNVGDLMQAWSNGRLRSSEHRVVLKRFINRLSLAFFWGFEDEKVIRAPDEVVGEGCSRIYKPFVCLDYLKFRENNDEGKFERIAHTVNDFAGIKQKGGMASVLEF
**M*ELQISVRLPVLDLSQPVSPSFLSSLSEACQEWGFFYVTNHGISQDMFKKVCSFSKRMFSSPTDTKLKLGPSSCIKTYTPHFIASPYFESLRVSGPDYFAAAKASACVLFGQQSSDFSELLQEYGIKMVELSQRISKIILMSLGGDYERKFYESEFGKCQGYLRIINYTPPETVKEDKELEGLGMHTDMSCLTLVYQDEIGGLQMRSKEGEWIDIFPCENSLVVNVGDLMQAWSNGRLRSSEHRVVLKRFINRLSLAFFWGFEDEKVIRAPDEVVGEGCSRIYKPFVCLDYLKFRENNDEGKFERIAHTVNDFAGIKQKGGMASVLEF
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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IVMPELQISVRLPVLDLSQPVSPSFLSSLSEACQEWGFFYVTNHGISQDMFKKVCSFSKRMFSSPTDTKLKLGPSSCIKTYTPHFIASPYFESLRVSGPDYFAAAKASACVLFGQQSSDFSELLQEYGIKMVELSQRISKIILMSLGGDYERKFYESEFGKCQGYLRIINYTPPETVKEDKELEGLGMHTDMSCLTLVYQDEIGGLQMRSKEGEWIDIFPCENSLVVNVGDLMQAWSNGRLRSSEHRVVLKRFINRLSLAFFWGFEDEKVIRAPDEVVGEGCSRIYKPFVCLDYLKFRENNDEGKFERIAHTVNDFAGIKQKGGMASVLEF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query331 2.2.26 [Sep-21-2011]
Q9C899361 Feruloyl CoA ortho-hydrox no no 0.879 0.806 0.350 3e-32
Q9C971355 Gibberellin 3-beta-dioxyg no no 0.839 0.783 0.308 7e-31
Q9LHN8361 Feruloyl CoA ortho-hydrox no no 0.867 0.795 0.286 1e-30
Q39110377 Gibberellin 20 oxidase 1 no no 0.864 0.758 0.329 6e-30
Q39103358 Gibberellin 3-beta-dioxyg no no 0.861 0.796 0.281 5e-28
O04705361 Gibberellin 20 oxidase 1- N/A no 0.882 0.808 0.308 5e-28
O04706365 Gibberellin 20 oxidase 1- N/A no 0.882 0.8 0.308 1e-27
O04707365 Gibberellin 20 oxidase 1- N/A no 0.806 0.731 0.325 2e-27
Q9C6I4336 Gibberellin 2-beta-dioxyg no no 0.725 0.714 0.303 2e-27
Q9SVS8349 Gibberellin 3-beta-dioxyg no no 0.737 0.699 0.333 3e-27
>sp|Q9C899|F6H2_ARATH Feruloyl CoA ortho-hydroxylase 2 OS=Arabidopsis thaliana GN=F6'H2 PE=1 SV=1 Back     alignment and function desciption
 Score =  139 bits (350), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 111/317 (35%), Positives = 165/317 (52%), Gaps = 26/317 (8%)

Query: 12  LPVLDLSQPVSPSFLSSLSEACQEWGFFYVTNHGISQDMFKKVCSFSKRMFSSPTDTKLK 71
           +PV+D+S     S   ++ +A +EWGFF V NHG+S ++ + + + + R F  P + K K
Sbjct: 62  IPVIDISNLDEKSVSKAVCDAAEEWGFFQVINHGVSMEVLENMKTATHRFFGLPVEEKRK 121

Query: 72  LGPSSCIKTYTPHFIA-SPYFESLRVSGPDY---FAAAKASACVLFGQQSSDFSELLQEY 127
                 + T      + SP+ E   +   DY   F  ++A A  L+    S  SE L EY
Sbjct: 122 FSREKSLSTNVRFGTSFSPHAEKA-LEWKDYLSLFFVSEAEASQLW--PDSCRSETL-EY 177

Query: 128 GIKMVELSQRISKIILMSLGGDYERKFYESEFGKCQGYLRI-INYTPPETVKEDKELE-G 185
             +   L +++ + +  +L      K  ES F    G  RI +NY P   +  + EL  G
Sbjct: 178 MNETKPLVKKLLRFLGENLNVKELDKTKESFF---MGSTRINLNYYP---ICPNPELTVG 231

Query: 186 LGMHTDMSCLTLVYQDEIGGLQMRS-KEGEWIDIFPCENSLVVNVGDLMQAWSNGRLRSS 244
           +G H+D+S LT++ QDEIGGL +RS   G W+ + P   SLV+N+GD MQ  SNGR +S 
Sbjct: 232 VGRHSDVSSLTILLQDEIGGLHVRSLTTGRWVHVPPISGSLVINIGDAMQIMSNGRYKSV 291

Query: 245 EHRVVLKRFINRLSLAFFWGFEDEKVIRAPDEVVGEGCSRIYKPFVCLDYLK--FRENND 302
           EHRV+     NR+S+  F   + E VI    EV+  G   +YK  +  DY+K  FR+ +D
Sbjct: 292 EHRVLANGSYNRISVPIFVSPKPESVIGPLLEVIENGEKPVYKDILYTDYVKHFFRKAHD 351

Query: 303 EGKFERIAHTVNDFAGI 319
             K      T+ DFA I
Sbjct: 352 GKK------TI-DFANI 361
2-oxoglutarate (OG)- and Fe(II)-dependent dioxygenase (2OGD)involved in scopoletin biosynthesis. Converts feruloyl CoA into 6'-hydroxyferuloyl CoA but has no activity with ferulic acid, feruloylquinic acid, caffeic acid, caffeoyl CoA, p-coumaric acid, cinnamic acid, cinnamoyl CoA or benzoyl CoA.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: -
>sp|Q9C971|G3OX4_ARATH Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis thaliana GN=At1g80330 PE=1 SV=1 Back     alignment and function description
>sp|Q9LHN8|F6H1_ARATH Feruloyl CoA ortho-hydroxylase 1 OS=Arabidopsis thaliana GN=F6'H1 PE=1 SV=1 Back     alignment and function description
>sp|Q39110|GAOX1_ARATH Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2 Back     alignment and function description
>sp|Q39103|G3OX1_ARATH Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA4 PE=1 SV=2 Back     alignment and function description
>sp|O04705|GAO1D_WHEAT Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1 Back     alignment and function description
>sp|O04706|GAO1B_WHEAT Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1 Back     alignment and function description
>sp|O04707|GAO1A_WHEAT Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1 Back     alignment and function description
>sp|Q9C6I4|G2OX7_ARATH Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=1 Back     alignment and function description
>sp|Q9SVS8|G3OX3_ARATH Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=At4g21690 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query331
225426432339 PREDICTED: gibberellin 3-beta-dioxygenas 0.957 0.935 0.742 1e-141
297742515321 unnamed protein product [Vitis vinifera] 0.957 0.987 0.742 1e-140
224074939320 2-oxoglutarate-dependent dioxygenase [Po 0.954 0.987 0.741 1e-140
255537487320 gibberellin 20-oxidase, putative [Ricinu 0.948 0.981 0.735 1e-139
225454236328 PREDICTED: gibberellin 20 oxidase 1-B [V 0.942 0.951 0.684 1e-130
255541592317 gibberellin 20-oxidase, putative [Ricinu 0.954 0.996 0.666 1e-125
224067894316 2-oxoglutarate-dependent dioxygenase [Po 0.948 0.993 0.656 1e-123
359490626324 PREDICTED: gibberellin 20 oxidase 1-B-li 0.954 0.975 0.661 1e-122
356506224319 PREDICTED: gibberellin 3-beta-dioxygenas 0.933 0.968 0.643 1e-120
297799660324 hypothetical protein ARALYDRAFT_492540 [ 0.945 0.966 0.662 1e-115
>gi|225426432|ref|XP_002270279.1| PREDICTED: gibberellin 3-beta-dioxygenase 4-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  505 bits (1301), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 236/318 (74%), Positives = 276/318 (86%), Gaps = 1/318 (0%)

Query: 3   MPELQISVRLPVLDLSQPVSPSFLSSLSEACQEWGFFYVTNHGISQDMFKKVCSFSKRMF 62
           M E    ++LPVLDLSQPV PSFL+SLS+AC+EWGFF+V NHGI QD+F KVC  SK +F
Sbjct: 1   MNEPPTPIQLPVLDLSQPVHPSFLTSLSQACEEWGFFHVMNHGIPQDLFSKVCLLSKHIF 60

Query: 63  SSPTDTKLKLGPSSCIKTYTPHFIASPYFESLRVSGPDYFAAAKASACVLFGQQSSDFSE 122
           S P D+KLKLGPSS IKTYTP FIASP+FESLR++GPD+ A+AK+S   LF QQ+S+FSE
Sbjct: 61  SLPADSKLKLGPSSSIKTYTPRFIASPFFESLRIAGPDFLASAKSSVAELFDQQNSEFSE 120

Query: 123 LLQEYGIKMVELSQRISKIILMSLGGDYERKFYESEFGKCQGYLRIINYTPPETVKEDKE 182
            LQEYG KMVELS+RI + +LMSLG  YERKF ESEF  CQGYLR++NY+PPE V ED+E
Sbjct: 121 TLQEYGSKMVELSKRIVEAVLMSLGDGYERKFNESEFNNCQGYLRLVNYSPPECV-EDEE 179

Query: 183 LEGLGMHTDMSCLTLVYQDEIGGLQMRSKEGEWIDIFPCENSLVVNVGDLMQAWSNGRLR 242
           +EGLGMHTDMSC+T+VYQDEIGGLQMRSK GEWIDI PCE +LVVN+GDLMQ WSNGRLR
Sbjct: 180 VEGLGMHTDMSCITIVYQDEIGGLQMRSKGGEWIDITPCEGTLVVNIGDLMQGWSNGRLR 239

Query: 243 SSEHRVVLKRFINRLSLAFFWGFEDEKVIRAPDEVVGEGCSRIYKPFVCLDYLKFRENND 302
           SSEHRVVLKRF+NRLSLAFFW FEDEKV+ APDE+VGEG SRIYKPFVCL+YLKFRE+N+
Sbjct: 240 SSEHRVVLKRFVNRLSLAFFWCFEDEKVVLAPDEIVGEGNSRIYKPFVCLEYLKFRESNE 299

Query: 303 EGKFERIAHTVNDFAGIK 320
           EGK+E++ +TV DFA +K
Sbjct: 300 EGKYEKVGYTVKDFAALK 317

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|297742515|emb|CBI34664.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224074939|ref|XP_002304499.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] gi|222841931|gb|EEE79478.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255537487|ref|XP_002509810.1| gibberellin 20-oxidase, putative [Ricinus communis] gi|223549709|gb|EEF51197.1| gibberellin 20-oxidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225454236|ref|XP_002274751.1| PREDICTED: gibberellin 20 oxidase 1-B [Vitis vinifera] gi|147834194|emb|CAN75307.1| hypothetical protein VITISV_040404 [Vitis vinifera] gi|297745296|emb|CBI40376.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255541592|ref|XP_002511860.1| gibberellin 20-oxidase, putative [Ricinus communis] gi|223549040|gb|EEF50529.1| gibberellin 20-oxidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224067894|ref|XP_002302586.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] gi|222844312|gb|EEE81859.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359490626|ref|XP_002271841.2| PREDICTED: gibberellin 20 oxidase 1-B-like [Vitis vinifera] gi|302143842|emb|CBI22703.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356506224|ref|XP_003521887.1| PREDICTED: gibberellin 3-beta-dioxygenase 4-like [Glycine max] Back     alignment and taxonomy information
>gi|297799660|ref|XP_002867714.1| hypothetical protein ARALYDRAFT_492540 [Arabidopsis lyrata subsp. lyrata] gi|297313550|gb|EFH43973.1| hypothetical protein ARALYDRAFT_492540 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query331
TAIR|locus:2121671324 AT4G23340 [Arabidopsis thalian 0.948 0.969 0.647 2e-111
TAIR|locus:2035671361 AT1G55290 [Arabidopsis thalian 0.879 0.806 0.353 8.3e-35
TAIR|locus:2005511377 GA20OX1 [Arabidopsis thaliana 0.876 0.769 0.330 1.1e-32
TAIR|locus:2086789361 AT3G13610 [Arabidopsis thalian 0.858 0.786 0.304 1.8e-32
TAIR|locus:2085879349 AT3G19010 [Arabidopsis thalian 0.595 0.564 0.325 2.1e-32
TAIR|locus:2011506317 AT1G52820 [Arabidopsis thalian 0.858 0.895 0.296 2.9e-32
TAIR|locus:2034195355 GA3OX4 "gibberellin 3-oxidase 0.839 0.783 0.318 1.4e-30
TAIR|locus:2089428364 LBO1 "LATERAL BRANCHING OXIDOR 0.861 0.782 0.321 1e-29
ASPGD|ASPL0000035942349 AN11188 [Emericella nidulans ( 0.622 0.590 0.308 3.7e-29
TAIR|locus:2206036376 GA20OX4 "gibberellin 20-oxidas 0.909 0.800 0.309 4.4e-29
TAIR|locus:2121671 AT4G23340 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1100 (392.3 bits), Expect = 2.0e-111, P = 2.0e-111
 Identities = 208/321 (64%), Positives = 258/321 (80%)

Query:     3 MPELQISVRLPVLDLSQPVSPSFLSSLSEACQEWGFFYVTNHGISQDMFKKVCSFSKRMF 62
             M EL  S++LPVLDL+QP+  S LSSLSEAC+EWGFFYVTNHGIS++MF K+CS S+ +F
Sbjct:     1 MSELHSSLQLPVLDLTQPIESSILSSLSEACKEWGFFYVTNHGISKEMFSKICSLSRDVF 60

Query:    63 SSPTDTKLKLGPSSCIKTYTPHFIASPYFESLRVSGPDYFAAAKASACVLF-GQQSSDFS 121
              +P ++KLKLGP S    YTP +IASPYFESL VSGPD+  +AKASA VLF      +  
Sbjct:    61 KAPLESKLKLGPIS----YTPRYIASPYFESLVVSGPDFSDSAKASADVLFQDHHKPELR 116

Query:   122 ELLQEYGIKMVELSQRISKIILM-SLGGDYERKFYESEFGKCQGYLRIINYTPPETVKED 180
             E +QEYG KM ELS+R+ KI+LM +LG +  ++ Y+++F  C GYLR++NYTPP  V++ 
Sbjct:   117 ETMQEYGAKMAELSKRLIKILLMMTLGDETGKRLYQTDFSNCHGYLRLVNYTPPHDVEKQ 176

Query:   181 KEL-EGLGMHTDMSCLTLVYQDEIGGLQMRSKEGEWIDIFPCENSLVVNVGDLMQAWSNG 239
             +EL EGLGMHTDMSC+T+VYQD +GGLQMRSKEG+WIDI PC + LVVN+GDLMQAWSNG
Sbjct:   177 EELVEGLGMHTDMSCITIVYQDSVGGLQMRSKEGKWIDINPCNDFLVVNIGDLMQAWSNG 236

Query:   240 RLRSSEHRVVLKRFINRLSLAFFWGFEDEKVIRAPDEVVGEGCSRIYKPFVCLDYLKFRE 299
             RLRSSEHRVVL++ +NR+SLAFF  FEDEKVI AP E+VGEG  R YK F C +YLKFR+
Sbjct:   237 RLRSSEHRVVLRKLVNRVSLAFFLCFEDEKVILAPQEIVGEGKQRSYKSFKCSEYLKFRQ 296

Query:   300 NNDEGKFERIAHTVNDFAGIK 320
             +N+EGKFE+I  TV DFAG+K
Sbjct:   297 SNEEGKFEKIGFTVKDFAGLK 317
GO:0005737 "cytoplasm" evidence=ISM
GO:0008152 "metabolic process" evidence=ISS
GO:0016491 "oxidoreductase activity" evidence=IEA;ISS
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
TAIR|locus:2035671 AT1G55290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2005511 GA20OX1 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2086789 AT3G13610 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2085879 AT3G19010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2011506 AT1G52820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2034195 GA3OX4 "gibberellin 3-oxidase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2089428 LBO1 "LATERAL BRANCHING OXIDOREDUCTASE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ASPGD|ASPL0000035942 AN11188 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
TAIR|locus:2206036 GA20OX4 "gibberellin 20-oxidase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.110.691
4th Layer1.14.11.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query331
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 2e-48
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 3e-48
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 4e-45
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 3e-39
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 9e-37
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 8e-36
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 6e-35
PLN02485329 PLN02485, PLN02485, oxidoreductase 5e-34
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 6e-33
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 8e-32
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 7e-31
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 5e-30
PLN02947374 PLN02947, PLN02947, oxidoreductase 7e-30
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 4e-29
PLN02216357 PLN02216, PLN02216, protein SRG1 7e-29
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 2e-27
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 3e-27
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 4e-25
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 5e-25
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 1e-24
PLN02704335 PLN02704, PLN02704, flavonol synthase 3e-24
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 6e-21
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 1e-20
PLN02904357 PLN02904, PLN02904, oxidoreductase 6e-20
PLN02997325 PLN02997, PLN02997, flavonol synthase 2e-19
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 7e-18
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 6e-16
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 3e-05
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information 
 Score =  164 bits (418), Expect = 2e-48
 Identities = 87/284 (30%), Positives = 135/284 (47%), Gaps = 31/284 (10%)

Query: 11  RLPVLDLS---QPVSP---SFLSSLSEACQEWGFFYVTNHGISQDMFKKVCSFSKRMFSS 64
            LP++DLS                L  AC+E GFFY+ NHGI   +  +  + +++ F+ 
Sbjct: 5   DLPIIDLSELAGSDPGARRRVAQELRAACREIGFFYLVNHGIDAALIDEAFALARQFFAL 64

Query: 65  PTDTKLKL----GPSSCIKTYTPHFI-----ASPYFESLRVSGPDY---FAAAKASACVL 112
           P + KLK+    G     + YTPH          Y E L + GPD     A  +A    L
Sbjct: 65  PVEEKLKILMVLGRQH--RGYTPHGGELTDGEPDYKEGLDM-GPDLDAELAGVRAGTP-L 120

Query: 113 FGQ----QSSDFSELLQEYGIKMVELSQRISKIILMSLGGDYERKFYESEFGKCQGYLRI 168
            G           + L +Y   M  +  R+ + I + L  D    F++         LR+
Sbjct: 121 HGPNLWPAIPGLRDALLQYYRAMTAVGLRLLRAIALGL--DLPEDFFDKRTSDPNSVLRL 178

Query: 169 INYTPPETVKEDKELEGLGMHTDMSCLTLVYQDEIGGLQMRSKEGEWIDIFPCENSLVVN 228
           + Y         +  +G+G HTD   LTL++QD++GGL++R   G W+D+ P   +LVVN
Sbjct: 179 LRYPSRPA---REGADGVGAHTDYGLLTLLFQDDVGGLEVRPPNGGWLDVPPIPGTLVVN 235

Query: 229 VGDLMQAWSNGRLRSSEHRVVLKRFINRLSLAFFWGFEDEKVIR 272
           +GD+++ W+NGRLRS+ HRV     ++R S+ FF     +  I 
Sbjct: 236 IGDMLERWTNGRLRSTVHRVRNPPGVDRYSIPFFLEPNFDAEIA 279

Length = 322
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 331
PLN02997325 flavonol synthase 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02216357 protein SRG1 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN02904357 oxidoreductase 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN02485329 oxidoreductase 100.0
PLN02704335 flavonol synthase 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02947374 oxidoreductase 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.9
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.8
PLN03176120 flavanone-3-hydroxylase; Provisional 99.71
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 96.86
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 95.77
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 95.2
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 93.34
>PLN02997 flavonol synthase Back     alignment and domain information 
Probab=100.00  E-value=2.6e-70  Score=507.51  Aligned_cols=282  Identities=23%  Similarity=0.424  Sum_probs=242.8

Q ss_pred             CCCCceEeCCCCCChhHHHHHHHHHhhcceEEEEcCCCCHHHHHHHHHHHHHhcCCCHHHHhhcCCCCCCcccCCCccCC
Q 039710            9 SVRLPVLDLSQPVSPSFLSSLSEACQEWGFFYVTNHGISQDMFKKVCSFSKRMFSSPTDTKLKLGPSSCIKTYTPHFIAS   88 (331)
Q Consensus         9 ~~~lPvIDls~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~Gy~~~~~~~   88 (331)
                      ..+||||||+...+.+++++|.+||+++|||||+||||+.++++++++++++||+||.|+|+++......+||.+...+.
T Consensus        30 ~~~IPvIDls~~~~~~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~GY~~~~~~~  109 (325)
T PLN02997         30 AVDVPVVDLSVSDEDFLVREVVKASEEWGVFQVVNHGIPTELMRQLQMVGKQFFELPEAEKETVAKEEDFEGYKRNYLGG  109 (325)
T ss_pred             CCCCCeEECCCCCHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccCCCccccCcccccC
Confidence            45899999998766678999999999999999999999999999999999999999999999997655678997653211


Q ss_pred             --cccccccccCCCchhhhhhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhHhhhcCc--cc
Q 039710           89 --PYFESLRVSGPDYFAAAKASACVLFGQQSSDFSELLQEYGIKMVELSQRISKIILMSLGGDYERKFYESEFGKC--QG  164 (331)
Q Consensus        89 --~~~e~~~~~~~~~~~~~~~~~~~~~p~~~p~fr~~~~~y~~~~~~la~~ll~~la~~Lg~~~~~~~~~~~~~~~--~~  164 (331)
                        ++.|.+...   .+. ......+.||+.+|+||+++++|+++|.+++.+|+++|+++||  +++++|.+.+...  .+
T Consensus       110 ~~d~~e~~~~~---~~p-~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~ia~~Lg--l~~~~f~~~~~~~~~~~  183 (325)
T PLN02997        110 INNWDEHLFHR---LSP-PSIINYKYWPKNPPQYREVTEEYTKHMKRLTEKILGWLSEGLG--LPRETFTQSIGGETAEY  183 (325)
T ss_pred             CCCccceeEee---ecC-ccccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHcC--CCHHHHHHHhcCCcccc
Confidence              233332210   000 0111247899888999999999999999999999999999999  5688998887643  35


Q ss_pred             eeeecccCCCCCCCCcccccccccccCCCceEEEeeCCCCceeEEccCCCeEEeccCCCeEEEEcchhhHHhhCCccccC
Q 039710          165 YLRIINYTPPETVKEDKELEGLGMHTDMSCLTLVYQDEIGGLQMRSKEGEWIDIFPCENSLVVNVGDLMQAWSNGRLRSS  244 (331)
Q Consensus       165 ~lrl~~Y~p~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqv~~~~g~W~~V~p~~g~~iVn~Gd~l~~~TnG~~~s~  244 (331)
                      .||++||||. +  .++...|+++|||+|+||||+||+++||||+ ++|+|++|+|.+|++|||+||+||+||||+||||
T Consensus       184 ~lRl~~YP~~-~--~~~~~~g~~~HTD~g~lTlL~Qd~v~GLQV~-~~g~Wi~V~p~pgalvVNiGD~Le~~TNG~~kSt  259 (325)
T PLN02997        184 VLRVNFYPPT-Q--DTELVIGAAAHSDMGAIALLIPNEVPGLQAF-KDEQWLDLNYINSAVVVIIGDQLMRMTNGRFKNV  259 (325)
T ss_pred             eeeeecCCCC-C--CcccccCccCccCCCceEEEecCCCCCEEEe-ECCcEEECCCCCCeEEEEechHHHHHhCCccccc
Confidence            8999888654 3  3455789999999999999999999999999 6899999999999999999999999999999999


Q ss_pred             ccccccCCCCceEEEEEeecCCCCcEEeCCccccCCCCCCCCCCccHHHHHHHHHh
Q 039710          245 EHRVVLKRFINRLSLAFFWGFEDEKVIRAPDEVVGEGCSRIYKPFVCLDYLKFREN  300 (331)
Q Consensus       245 ~HRV~~~~~~~R~Si~~F~~p~~d~~i~p~~~~~~~~~~~~y~~~~~~e~~~~~~~  300 (331)
                      +|||+.++..+||||+||++|+.|++|.|+++++++++|++|+|++++||++.|++
T Consensus       260 ~HRVv~~~~~~R~Si~fF~~P~~d~~i~Plp~~v~~~~p~~y~~~~~~e~l~~r~~  315 (325)
T PLN02997        260 LHRAKTDKERLRISWPVFVAPRADMSVGPLPELTGDENPPKFETLIYNDYIDQKIR  315 (325)
T ss_pred             cceeeCCCCCCEEEEEEEecCCCCCeEeCChHHcCCCCCCcCCCccHHHHHHHHHh
Confidence            99999987789999999999999999999999999888999999999999999875

>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02216 protein SRG1 Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query331
1w9y_A319 The Structure Of Acc Oxidase Length = 319 6e-23
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 6e-17
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 6e-17
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 1e-16
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 6e-15
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 9e-11
2bjs_A325 Isopenicillin N Synthase C-Terminal Truncation Muta 3e-06
1ips_A331 Isopenicillin N Synthase From Aspergillus Nidulans 4e-06
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure 
Iteration: 1

 Score =  104 bits (260), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 137/286 (47%), Gaps = 38/286 (13%)
Query: 29  LSEACQEWGFFYVTNHGISQDMFKKVCSFSKRMFSSPTDTKLKLGPSSCIKTYTPHFIAS 88
           + +AC+ WGFF + NHGI +++   V   +K  +              C +      +AS
Sbjct: 24  IKDACENWGFFELVNHGIPREVXDTVEKXTKGHYKK------------CXEQRFKELVAS 71
Query: 89  PYFESLRVSGPD-------YFAAAKASACVLFGQQSSDFSELLQEYGIKMVELSQRISKI 141
              E ++    D       +      S          ++ E+ +++  ++ +L++ +  +
Sbjct: 72  KALEGVQAEVTDXDWESTFFLKHLPISNISEVPDLDEEYREVXRDFAKRLEKLAEELLDL 131
Query: 142 ILMSLGGDYERKFYESEFGKCQGY---LRIINYTP---PETVKEDKELEGLGMHTDMSCL 195
           +  +LG   E+ + ++ F   +G     ++ NY P   P+ +K      GL  HTD   +
Sbjct: 132 LCENLG--LEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIK------GLRAHTDAGGI 183
Query: 196 TLVYQDE-IGGLQMRSKEGEWIDIFPCENSLVVNVGDLMQAWSNGRLRSSEHRVVLKRFI 254
            L++QD+ + GLQ+  K+G+WID+ P  +S+VVN+GD ++  +NG+ +S  HRV+ ++  
Sbjct: 184 ILLFQDDKVSGLQLL-KDGQWIDVPPXRHSIVVNLGDQLEVITNGKYKSVXHRVIAQKDG 242
Query: 255 NRLSLAFFWGFEDEKVIRAPDEVV---GEGCSRIYKPFVCLDYLKF 297
            R SLA F+    + VI     +V    E   ++Y  FV  DY K 
Sbjct: 243 ARXSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYXKL 288
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure
>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 Back     alignment and structure
>pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Manganese Complex) Length = 331 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query331
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 3e-70
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 3e-69
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 6e-69
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 6e-68
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 2e-67
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 2e-63
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
 Score =  220 bits (563), Expect = 3e-70
 Identities = 66/333 (19%), Positives = 110/333 (33%), Gaps = 53/333 (15%)

Query: 3   MPELQISVRLPVLDLSQPVSPS------FLSSLSEACQEWGFFYVTNHGISQDMFKKVCS 56
           + +  +    P +D+S                +  A ++ GFFY  NHGI+     +   
Sbjct: 4   VSKANV----PKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGINVQRLSQKTK 59

Query: 57  FSKRMFSSPTDTKLKLGPSSCIKTYTPHFIAS--------PYFESLRVSGPDYFAAAKAS 108
             +   S   + K  L   +  K +     A            ES     P++       
Sbjct: 60  --EFHMSITPEEKWDLAIRAYNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRI 117

Query: 109 ACVLFGQ---------QSSDFSELLQEYGIKMVELSQRISKIILMSLGGDYERKFYESEF 159
                           +   F +  ++Y   +  LS  + K   ++LG   E  F+   F
Sbjct: 118 QAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSALLKGYALALG--KEENFFARHF 175

Query: 160 --GKCQGYLRIINYTPP--------ETVKEDKELEGLGMHTDMSCLTLVYQDEIGGLQMR 209
                   + +I Y P              D        H D+S +T++YQ  +  LQ+ 
Sbjct: 176 KPDDTLASVVLIRY-PYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQNLQVE 234

Query: 210 SKEGEWIDIFPCENSLVVNVGDLMQAWSNGRLRSSEHRVVLKRFIN----RLSLAFFWGF 265
           +  G + DI   +   ++N G  M   +N   ++  HRV           R SL FF   
Sbjct: 235 TAAG-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVK-----WVNAERQSLPFFVNL 288

Query: 266 EDEKVIRAPDEVVGEGCSRIYKPFVCLDYLKFR 298
             + VI   D     G S   +P    DYL+  
Sbjct: 289 GYDSVIDPFDPREPNGKSD-REPLSYGDYLQNG 320
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query331
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 95.56
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 95.52
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 90.76
2jig_A224 Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { 85.12
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 84.69
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
Probab=100.00  E-value=1.8e-72  Score=521.09  Aligned_cols=288  Identities=21%  Similarity=0.326  Sum_probs=247.9

Q ss_pred             CCCCceEeCCCCC--ChhHHHHHHHHHhhcceEEEEcCCCCHHHHHHHHHHHHHhcCCCHHHHhhcCCC-CCCcccCCCc
Q 039710            9 SVRLPVLDLSQPV--SPSFLSSLSEACQEWGFFYVTNHGISQDMFKKVCSFSKRMFSSPTDTKLKLGPS-SCIKTYTPHF   85 (331)
Q Consensus         9 ~~~lPvIDls~~~--~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~Gy~~~~   85 (331)
                      ..+||||||+.+.  +.+++++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++... ...+||++.+
T Consensus         4 ~~~iPvIDls~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~~g   83 (312)
T 3oox_A            4 TSAIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARGYIPFG   83 (312)
T ss_dssp             CCSSCCEETHHHHHCHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSEEECCC
T ss_pred             CCCCCeEEChHhcccHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCcccccccc
Confidence            5679999999763  346789999999999999999999999999999999999999999999999753 3578997655


Q ss_pred             cC-------CcccccccccCCCc--hhhhhhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchhhhH
Q 039710           86 IA-------SPYFESLRVSGPDY--FAAAKASACVLFGQQSSDFSELLQEYGIKMVELSQRISKIILMSLGGDYERKFYE  156 (331)
Q Consensus        86 ~~-------~~~~e~~~~~~~~~--~~~~~~~~~~~~p~~~p~fr~~~~~y~~~~~~la~~ll~~la~~Lg~~~~~~~~~  156 (331)
                      .+       .+++|.+.+.....  .........+.||...|+||+.+++|+++|.+++.+|+++|+++||  +++++|.
T Consensus        84 ~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lg--l~~~~f~  161 (312)
T 3oox_A           84 VETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLK--LERDFFK  161 (312)
T ss_dssp             CCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTT--SCTTTTH
T ss_pred             ceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--cCHHHHH
Confidence            32       24567666532110  0111123457899999999999999999999999999999999999  5689999


Q ss_pred             hhhcCccceeeecccCCCCCCCCcccccccccccCCCceEEEeeCCCCceeEEccCCCeEEeccCCCeEEEEcchhhHHh
Q 039710          157 SEFGKCQGYLRIINYTPPETVKEDKELEGLGMHTDMSCLTLVYQDEIGGLQMRSKEGEWIDIFPCENSLVVNVGDLMQAW  236 (331)
Q Consensus       157 ~~~~~~~~~lrl~~Y~p~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqv~~~~g~W~~V~p~~g~~iVn~Gd~l~~~  236 (331)
                      +.+..+.+.||++||||...  ... ..|+++|||+|+||||+||+++||||++++|+|++|+|++|++|||+||+||+|
T Consensus       162 ~~~~~~~~~lr~~~Ypp~~~--~~~-~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~  238 (312)
T 3oox_A          162 PTVQDGNSVLRLLHYPPIPK--DAT-GVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLERL  238 (312)
T ss_dssp             HHHTTCCCEEEEEEECCCSS--CCC---CEEEECCCSSEEEEECCTTSCEEEECTTSCEEECCCCSSCEEEEECHHHHHH
T ss_pred             HHhcCCcceeeeEecCCCCC--CcC-CcCccceecCceEEEEeEcCcCceEEECCCCcEEECCCCCCeEEEEhHHHHHHH
Confidence            99988888999988876443  223 389999999999999999999999999999999999999999999999999999


Q ss_pred             hCCccccCccccccCC----CCceEEEEEeecCCCCcEEeCCccccCCCCCCCCC-CccHHHHHHHHHhc
Q 039710          237 SNGRLRSSEHRVVLKR----FINRLSLAFFWGFEDEKVIRAPDEVVGEGCSRIYK-PFVCLDYLKFRENN  301 (331)
Q Consensus       237 TnG~~~s~~HRV~~~~----~~~R~Si~~F~~p~~d~~i~p~~~~~~~~~~~~y~-~~~~~e~~~~~~~~  301 (331)
                      |||+||||.|||+.++    ..+||||+||++|+.|++|.|+++++++++|++|+ |+|++||++.|+++
T Consensus       239 TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~  308 (312)
T 3oox_A          239 TNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLRE  308 (312)
T ss_dssp             TTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHH
T ss_pred             hCCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHH
Confidence            9999999999998763    46799999999999999999999999998999999 99999999999863
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Back     alignment and structure
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 331
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 2e-49
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 3e-49
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 7e-47
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 2e-32
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: 1-aminocyclopropane-1-carboxylate oxidase 1
species: Petunia hybrida [TaxId: 4102]

 Score =  165 bits (418), Expect = 2e-49
 Identities = 68/307 (22%), Positives = 137/307 (44%), Gaps = 14/307 (4%)

Query: 12  LPVLDLSQPVSP---SFLSSLSEACQEWGFFYVTNHGISQDMFKKVCSFSKRMFSSPTDT 68
            P++ L +       + +  + +AC+ WGFF + NHGI +++   V   +K  +    + 
Sbjct: 3   FPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQ 62

Query: 69  KLKLGPSSCIKTYTPHFIASPYFESLRVSGPDYFAAAKASACVLFGQQSSDFSELLQEYG 128
           + K   +S         +    +ES         +               ++ E+++++ 
Sbjct: 63  RFKELVASKALEGVQAEVTDMDWESTFFLKHLPISNISE-----VPDLDEEYREVMRDFA 117

Query: 129 IKMVELSQRISKIILMSLGGDYERKFYESEFGKCQGYLRIINYTPPETVKEDKELEGLGM 188
            ++ +L++ +  ++  +LG +           K   +   ++  PP    +   ++GL  
Sbjct: 118 KRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPP--CPKPDLIKGLRA 175

Query: 189 HTDMSCLTLVYQDEIGGLQMRSKEGEWIDIFPCENSLVVNVGDLMQAWSNGRLRSSEHRV 248
           HTD   + L++QD+        K+G+WID+ P  +S+VVN+GD ++  +NG+ +S  HRV
Sbjct: 176 HTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRV 235

Query: 249 VLKRFINRLSLAFFWGFEDEKVIRAPDEVV---GEGCSRIYKPFVCLDYLKFRENND-EG 304
           + ++   R+SLA F+    + VI     +V    E   ++Y  FV  DY+K       + 
Sbjct: 236 IAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQA 295

Query: 305 KFERIAH 311
           K  R   
Sbjct: 296 KEPRFEA 302
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query331
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 93.65
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=4e-67  Score=491.09  Aligned_cols=284  Identities=25%  Similarity=0.402  Sum_probs=235.4

Q ss_pred             CCCCCCceEeCCCCCCh------hHHHHHHHHHhhcceEEEEcCCCCHHHHHHHHHHHHHhcCCCHHHHhhcCCCC---C
Q 039710            7 QISVRLPVLDLSQPVSP------SFLSSLSEACQEWGFFYVTNHGISQDMFKKVCSFSKRMFSSPTDTKLKLGPSS---C   77 (331)
Q Consensus         7 ~~~~~lPvIDls~~~~~------~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~---~   77 (331)
                      .+..+||||||+.+.+.      .++++|.+||+++|||||+||||+.++++++++++++||+||.|+|+++....   .
T Consensus        41 ~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~nHGI~~~li~~~~~~~~~FF~lP~eeK~k~~~~~~~~~  120 (349)
T d1gp6a_          41 EDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGK  120 (349)
T ss_dssp             CCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTB
T ss_pred             CCCCCcCeEEChhcCCCCHHHHHHHHHHHHHHHHhCCEEEEEccCCCHHHHHHHHHHHHHHHcCCHHHHhhhhcccccCC
Confidence            35668999999998532      46899999999999999999999999999999999999999999999996432   2


Q ss_pred             CcccCCCccCCcccccccccCCCch----hhhhhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchh
Q 039710           78 IKTYTPHFIASPYFESLRVSGPDYF----AAAKASACVLFGQQSSDFSELLQEYGIKMVELSQRISKIILMSLGGDYERK  153 (331)
Q Consensus        78 ~~Gy~~~~~~~~~~e~~~~~~~~~~----~~~~~~~~~~~p~~~p~fr~~~~~y~~~~~~la~~ll~~la~~Lg~~~~~~  153 (331)
                      ..+|........   .......+..    ........+.||...+.|++.+++|+++|.+++.+|+++++++||  ++++
T Consensus       121 ~~~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~n~wp~~~~~f~e~~~~~~~~~~~la~~ll~~la~~Lg--l~~~  195 (349)
T d1gp6a_         121 IQGYGSKLANNA---SGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLG--LEPD  195 (349)
T ss_dssp             CSEEECCCCCST---TCCCCSCEEEEEEEESGGGCCGGGSCCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTT--SCTT
T ss_pred             cccccccccccc---ccccchhhhhcccccccccccccccccccchHHHHHHHHHHHHHHHHHhhhHHHHHHcC--CCHH
Confidence            233322211110   0000001100    001223457899999999999999999999999999999999999  5688


Q ss_pred             hhHhhhc---CccceeeecccCCCCCCCCcccccccccccCCCceEEEeeCCCCceeEEccCCCeEEeccCCCeEEEEcc
Q 039710          154 FYESEFG---KCQGYLRIINYTPPETVKEDKELEGLGMHTDMSCLTLVYQDEIGGLQMRSKEGEWIDIFPCENSLVVNVG  230 (331)
Q Consensus       154 ~~~~~~~---~~~~~lrl~~Y~p~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqv~~~~g~W~~V~p~~g~~iVn~G  230 (331)
                      +|.+.+.   ...+.||++||+|..   .+....|+++|||+|+||||+|+.++||||+ ++|+|++|+|.+|++|||+|
T Consensus       196 ~~~~~~~~~~~~~~~lrl~~Yp~~~---~~~~~~g~~~HtD~g~lTlL~q~~~~GLqv~-~~g~W~~V~p~~~a~vVNvG  271 (349)
T d1gp6a_         196 RLEKEVGGLEELLLQMKINYYPKCP---QPELALGVEAHTDVSALTFILHNMVPGLQLF-YEGKWVTAKCVPDSIVMHIG  271 (349)
T ss_dssp             HHHHHTTHHHHCEEEEEEEEECCCS---STTTCCSEEEECCCSSEEEEEECSCCCEEEE-ETTEEEECCCCTTCEEEEEC
T ss_pred             HHHHHhccccccceeeeeccccccc---chhhccccccCCCCcceEEEeccCCcceeee-cCCceEEccCCCCCeeeeHH
Confidence            8887763   345689998886543   3455789999999999999999999999998 78999999999999999999


Q ss_pred             hhhHHhhCCccccCccccccCCCCceEEEEEeecCCCCcEE-eCCccccCCCCCCCCCCccHHHHHHHHH
Q 039710          231 DLMQAWSNGRLRSSEHRVVLKRFINRLSLAFFWGFEDEKVI-RAPDEVVGEGCSRIYKPFVCLDYLKFRE  299 (331)
Q Consensus       231 d~l~~~TnG~~~s~~HRV~~~~~~~R~Si~~F~~p~~d~~i-~p~~~~~~~~~~~~y~~~~~~e~~~~~~  299 (331)
                      |+||+||||+||||+|||+.+++.+||||+||++|+.|++| .|+++++++++|++|+|+|++||++.|+
T Consensus       272 D~l~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~~pl~~~v~~~~p~~y~~~t~~e~~~~rl  341 (349)
T d1gp6a_         272 DTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKL  341 (349)
T ss_dssp             HHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCCSSSCCSSCCEEHHHHHHHHH
T ss_pred             hHHHHHhCCCccCcCccccCCCCCCeEEEEEEecCCCcceeecCCHHHcCCCCCCCCCCccHHHHHHHHH
Confidence            99999999999999999999888999999999999999765 8999999999999999999999999988
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure