Citrus Sinensis ID: 039782

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340
Protein Sequence
MEILKSSVAIILVVIVSCVIQVKAEASVVYCSNPFSRCFDKEIECPFECPNTESDDPKAKVCYVNCDHPTCKPQCKHRIANCDSPGSACYDPRFIGGDGIVFYFHGKSNEHFSLVSDSELQINARFIGHRPAGRSRDFTWIQALGILFQSHSFSLEAAKAATWDNEIDHLKFSYNGQDLVIPEGPLSIWYSEEKDVKVERVSSKNSAIVSLKDTAEILVNVVPVTKEDDRVHKYQVPADDCFAHLEVQFRFFNLSAKVDGVLGRTYRPDFENPAKPGVAMAVLGGEKEYKTESLFSTNCKTCIFATGSGADHQETTELMKFGTLDCTRRSSAGYGIVCKK
Secondary Structure (PSIPRED)
ccccccccEEEEEEEEEEEEEcccccEEEEEEcccccccccccccccccccccccccccccEEEEcccccccccccccccccccccccccccEEEEccccEEEEEccccccEEEEEccccEEEEEEEEEcccccccccEEEEEEEEEEcccEEEEEEEccccccccccEEEEEEccEEEEcccccccEEEccccccEEEEEccccEEEEEEccEEEEEEEEEEcccccccccccccccccccEEEEEEEEEEcccccEEEccccccccccccccccccccEEEccccccccccccccccccEEEcccccccccccccccccccccccccccccEEEEEcc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHEEHcccccEEEEcccccccccEEEEccccccccccccccccEEEEEccccccccEEEEccccccccccccccccEEccccEEEEEEccccccEEEEEccccEEEEEEEcccccccccccHHHHHEEEEEcccEEEEEEEEcccccccccEEEEEEcccEEEcccccccEEccccccEEEEEEccccEEEEEEccEEEEEEEEEEccccccccccccccccccEEEEEEEEEEEccccccccEEccccccccccccccccccccccccccccccccccccccEEEEccccccccccccHHHcccccccccccccccEEEEcc
Coil and Loop (DISEMBL)
MEILKSSVAIILVVIVSCVIQVKAEASVvycsnpfsrcfdkeiecpfecpntesddpkakvcyvncdhptckpqckhriancdspgsacydprfiggdgivfyfhgksnehfslvsdsELQINARfighrpagrsrdfTWIQALGILFQSHSFSLEAAKAatwdneidhlkfsyngqdlvipegplsiwyseekdvkvervssknsaivSLKDTAEILVNVvpvtkeddrvhkyqvpaddcfaHLEVQFRFFNLsakvdgvlgrtyrpdfenpakpgvAMAVlggekeykteslfstncktcifatgsgadhqetTELMkfgtldctrrssagygivckk
Flexible Loop (DISEMBL)
MEILKSSVAIILVVIVSCVIQVKAEASVVYCSNPFSRCFDKEIECPFECPNTESDDPKAKVCYVNCDHPTCKPQCKHRIANCDSPGSACYDPRFIGGDGIVFYFHGKSNEHFSLVSDSELQINARFIGHRPAGRSRDFTWIQALGILFQSHSFSLEAAKAATWDNEIDHLKFSYNGQDLVIPEGPLSIWYSEEKDVKVERvssknsaivslkdtaeiLVNVVpvtkeddrvHKYQVPADDCFAHLEVQFRFFNLSAKVDGVLGRtyrpdfenpakpGVAMAVLGGEKEYKTESLFSTNCKTCIFATgsgadhqeTTELMkfgtldctrrssagygivckk
Low Complexity Region (SEG)
MEilkssvaiilvvivscviqvkaEASVVYCSNPFSRCFDKEIECPFECPNTESDDPKAKVCYVNCDHPTCKPQCKHRIANCDSPGSACYDPRFIGGDGIVFYFHGKSNEHFSLVSDSELQINARFIGHRPAGRSRDFTWIQALGILFQSHSFSLEAAKAATWDNEIDHLKFSYNGQDLVIPEGPLSIWYSEEKDVKVERVSSKNSAIVSLKDTAEILVNVVPVTKEDDRVHKYQVPADDCFAHLEVQFRFFNLSAKVDGVLGRTYRPDFENPAKPGVAMAVLGGEKEYKTESLFSTNCKTCIFATGSGADHQETTELMKFGTLDCTRRSSAGYGIVCKK
Disordered region (IsUnstruct)
*****SSVAIILVVIVSCVIQVKAEASVVYCSNPFSRCFDKEIECPFECPNT****PKAKVCYVNCDHPTCKPQCKHRIANCDSPGSACYDPRFIGGDGIVFYFHGKSNEHFSLVSDSELQINARFIGHRPAGRSRDFTWIQALGILFQSHSFSLEAAKAATWDNEIDHLKFSYNGQDLVIPEGPLSIWYSEEKDVKVERVSSKNSAIVSLKDTAEILVNVVPVTKEDDRVHKYQVPADDCFAHLEVQFRFFNLSAKVDGVLGRTYRPDFENPAKPGVAMAVLGGEKEYKTESLFSTNCKTCIFATGSGADHQETTELMKFGTLDCTRRSSAGYGIVC**
Disordered Region (DISOPRED)
*****SS**IILVVIVSCVIQVKAEASVVYCSNPFSRCFDKEIECPFECPNTESDDPKAKVCYVNCDHPTCKPQCKHRIANCDSPGSACYDPRFIGGDGIVFYFHGKSNEHFSLVSDSELQINARFIGHRPAGRSRDFTWIQALGILFQSHSFSLEAAKAATWDNEIDHLKFSYNGQDLVIPEGP****Y*EEKDVKVERVSSKNSAIVSLKDTAEILVNVVPVTKEDDRVHKYQVPADDCFAHLEVQFRFFNLSAKVDGVLGRTYRPDFENPAKPGVAMAVLGGEKEYKTESLFSTNCKTCI*****************FGTLDCTRRSSAGYGIVCKK
Disordered Region (DISEMBL)
MEILKSSVAIILVVIVSCVIQVKAEASVVYCSNPFSRCFDKEIECPFECPNTESDDPKAKVCYVNCDHPTCKPQCKHRIANCDSPGSACYDPRFIGGDGIVFYFHGKSNEHFSLVSDSELQINARFIGHRPAGRSRDFTWIQALGILFQSHSFSLEAAKAATWDNEIDHLKFSYNGQDLVIPEGPLSIWYSEEKDV*********SAIVSLKDTAEILVNVVPVTKEDDRVHKYQVPADDCFAHLEVQFRFFNLSAKVDGVLGRTYRPDFENPAKPGVAMAVLGGEKEYKTESLFSTNCKTCIFATGSGADHQETTELMKFGTLDCTRRSSAGYGIVCKK
Disordered Region (DISPRO)
*EILKSSVAIILVVIVSCVIQVKAEASVVYCSNPFSRCFDKEIECPFECPNTESDDPKAKVCYVNCDHPTCKPQCKHRIANCDSPGSACYDPRFIGGDGIVFYFHGKSNEHFSLVSDSELQINARFIGHRPAGRSRDFTWIQALGILFQSHSFSLEAAKAATWDNEIDHLKFSYNGQDLVIPEGPLSIWYSEEKDVKVERVSSKNSAIVSLKDTAEILVNVVPVTKEDDRVHKYQVPADDCFAHLEVQFRFFNLSAKVDGVLGRTYRPDFENPAKPGVAMAVLGGEKEYKTESLFSTNCKTCIFATGS*******T**MKFGTLDCTRR*SAGY***C**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MEILKSSVAIILVVIVSCVIQVKAEASVVYCSNPFSRCFDKEIECPFECPNTESDDPKAKVCYVNCDHPTCKPQCKHRIANCDSPGSACYDPRFIGGDGIVFYFHGKSNEHFSLVSDSELQINARFIGHRPAGRSRDFTWIQALGILFQSHSFSLEAAKAATWDNEIDHLKFSYNGQDLVIPEGPLSIWYSEEKDVKVERVSSKNSAIVSLKDTAEILVNVVPVTKEDDRVHKYQVPADDCFAHLEVQFRFFNLSAKVDGVLGRTYRPDFENPAKPGVAMAVLGGEKEYKTESLFSTNCKTCIFATGSGADHQETTELMKFGTLDCTRRSSAGYGIVCKK
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	340
255586098	340	structural constituent of cell wall, put	0.997	0.997	0.741	1e-152
15239629	337	late embryogenesis abundant protein-like	0.991	1.0	0.685	1e-140
359493884	338	PREDICTED: uncharacterized protein LOC10	0.982	0.988	0.664	1e-133
302143065	342	unnamed protein product [Vitis vinifera]	0.947	0.941	0.68	1e-132
356544000	339	PREDICTED: uncharacterized protein LOC10	0.991	0.994	0.640	1e-129
356549769	334	PREDICTED: uncharacterized protein LOC10	0.979	0.997	0.656	1e-129
225461342	338	PREDICTED: uncharacterized protein LOC10	0.991	0.997	0.645	1e-129
356546896	334	PREDICTED: uncharacterized protein LOC10	0.979	0.997	0.651	1e-127
224117262	303	predicted protein [Populus trichocarpa]	0.888	0.996	0.671	1e-121
15234120	341	late embryogenesis abundant protein-like	1.0	0.997	0.595	1e-121

>gi|255586098|ref|XP_002533713.1| structural constituent of cell wall, putative [Ricinus communis] gi|223526387|gb|EEF28676.1| structural constituent of cell wall, putative [Ricinus communis]

 Score =  543 bits (1398), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 253/341 (74%), Positives = 293/341 (85%), Gaps = 2/341 (0%)

Query: 1   MEILKS-SVAIILVVIVSCVIQVKAEASVVYCSNPFSRCFDKEIECPFECPNTESDDPKA 59
           M+IL S S+++IL+  +S +IQ  A    V C+N  SRC+ K + CP ECP+T S DP A
Sbjct: 1   MKILSSISLSVILLAFISGLIQANAAVESVKCNNAASRCYGKNVYCPAECPSTYSKDPYA 60

Query: 60  KVCYVNCDHPTCKPQCKHRIANCDSPGSACYDPRFIGGDGIVFYFHGKSNEHFSLVSDSE 119
           KVCY+NCDHP CK +CK R A+CD+PGSACYDPRFIGGDG+VFYFHGKSNEHFSLVSD+ 
Sbjct: 61  KVCYINCDHPQCKTECKRRKASCDTPGSACYDPRFIGGDGVVFYFHGKSNEHFSLVSDTN 120

Query: 120 LQINARFIGHRPAGRSRDFTWIQALGILFQSHSFSLEAAKAATWDNEIDHLKFSYNGQDL 179
           LQIN RFIGHRPAGR+RDFTWIQALG+LF + +FSLEA KAATWD+EIDHLKF+YNGQDL
Sbjct: 121 LQINGRFIGHRPAGRTRDFTWIQALGVLFNTRTFSLEATKAATWDSEIDHLKFTYNGQDL 180

Query: 180 VIPEGPLSIWYSEEKDVKVERVSSKNSAIVSLKDTAEILVNVVPVTKEDDRVHKYQVPAD 239
           V+PEG LSIWYS EKDVKVERVSS+NSAIV+LKDT EILVNVVPVTKEDDRVH YQVPA+
Sbjct: 181 VVPEGSLSIWYSPEKDVKVERVSSRNSAIVTLKDTVEILVNVVPVTKEDDRVHNYQVPAN 240

Query: 240 DCFAHLEVQFRFFNLSAKVDGVLGRTYRPDFENPAKPGVAMAVLGGEKEYKTESLFSTNC 299
           DCF HLEVQFRFFNLS KVDGVLGRTYRPDFENPAKPGVAM VLGGE++Y+T SL S +C
Sbjct: 241 DCFVHLEVQFRFFNLSPKVDGVLGRTYRPDFENPAKPGVAMPVLGGEEKYRTPSLLSPDC 300

Query: 300 KTCIFATGSGADHQETTELMKFGTLDCTRRSSAGYGIVCKK 340
           ++CIF+T SG+  QE +  + +GTLDCTR +SAGYGIVC+K
Sbjct: 301 QSCIFSTQSGS-KQEASSSIDYGTLDCTRGASAGYGIVCRK 340

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15239629|ref|NP_200248.1| late embryogenesis abundant protein-like protein [Arabidopsis thaliana] gi|10257484|dbj|BAB10109.1| root cap protein 2-like protein [Arabidopsis thaliana] gi|71143048|gb|AAZ23915.1| At5g54370 [Arabidopsis thaliana] gi|332009106|gb|AED96489.1| late embryogenesis abundant protein-like protein [Arabidopsis thaliana]

 Score =  503 bits (1296), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 233/340 (68%), Positives = 277/340 (81%), Gaps = 3/340 (0%)

Query: 1   MEILKSSVAIILVVIVSCVIQVKAEASVVYCSNPFSRCFDKEIECPFECPNTESDDPKAK 60
           MEI K+ + +I +V  +C +Q KA    VYCSNP++RC+ K I CP ECP+  + + K K
Sbjct: 1   MEISKTLLLVISLVAATCFLQAKAAG--VYCSNPYTRCYRKYIRCPEECPSKTAMNSKNK 58

Query: 61  VCYVNCDHPTCKPQCKHRIANCDSPGSACYDPRFIGGDGIVFYFHGKSNEHFSLVSDSEL 120
           VCY +CD PTCK QC+ R  NC+ PGSACYDPRFIGGDGIVFYFHGKSNE FSLVSDS+L
Sbjct: 59  VCYADCDRPTCKSQCRMRKPNCNRPGSACYDPRFIGGDGIVFYFHGKSNEEFSLVSDSDL 118

Query: 121 QINARFIGHRPAGRSRDFTWIQALGILFQSHSFSLEAAKAATWDNEIDHLKFSYNGQDLV 180
           QIN RFIGHRPAGR+RDFTWIQALG LF S+ FSLEAAK A+WDNEIDHLKFSY+GQDL 
Sbjct: 119 QINGRFIGHRPAGRARDFTWIQALGFLFNSNKFSLEAAKTASWDNEIDHLKFSYDGQDLS 178

Query: 181 IPEGPLSIWYSEEKDVKVERVSSKNSAIVSLKDTAEILVNVVPVTKEDDRVHKYQVPADD 240
           +PE  LS WYS  KD+K+ERVS +NS IV++KD AEI++NVVPVTKEDDR+H Y+VP+DD
Sbjct: 179 VPEETLSTWYSPNKDIKIERVSMRNSVIVTIKDKAEIMINVVPVTKEDDRIHSYKVPSDD 238

Query: 241 CFAHLEVQFRFFNLSAKVDGVLGRTYRPDFENPAKPGVAMAVLGGEKEYKTESLFSTNCK 300
           CFAHLEVQFRFFNLS KVDG+LGRTYRPDF+NPAKPGVAM V+GGE  +KT SL S +CK
Sbjct: 239 CFAHLEVQFRFFNLSPKVDGILGRTYRPDFQNPAKPGVAMPVVGGEDSFKTSSLLSNDCK 298

Query: 301 TCIFATGSGADHQETTELMKFGTLDCTRRSSAGYGIVCKK 340
           TCIF+  S A+       +++ TLDCTR +S+GYGIVC+K
Sbjct: 299 TCIFSE-SQAEIDSVKSEIEYATLDCTRGASSGYGIVCRK 337

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359493884|ref|XP_002281881.2| PREDICTED: uncharacterized protein LOC100252062 [Vitis vinifera]

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 224/337 (66%), Positives = 270/337 (80%), Gaps = 3/337 (0%)

Query: 4   LKSSVAIILVVIVSCVIQVKAEASVVYCSNPFSRCFDKEIECPFECPNTESDDPKAKVCY 63
           + S + + L+  VS V+QVKA    V C+N  SRC+ K + CP ECP T S+DPKAKVCY
Sbjct: 5   ISSCIWVFLLFFVSGVVQVKA--YYVECTNKESRCYQKTLACPSECPYTYSEDPKAKVCY 62

Query: 64  VNCDHPTCKPQCKHRIANCDSPGSACYDPRFIGGDGIVFYFHGKSNEHFSLVSDSELQIN 123
           +NC+ P CK +CKHR  NC+ PG+ACYDPRFIGGDG+VFYFHGKSNEHFSLVSD  LQIN
Sbjct: 63  INCNSPQCKAECKHRKPNCNGPGAACYDPRFIGGDGVVFYFHGKSNEHFSLVSDRNLQIN 122

Query: 124 ARFIGHRPAGRSRDFTWIQALGILFQSHSFSLEAAKAATWDNEIDHLKFSYNGQDLVIPE 183
            RF GHRPAGR RDFTWIQALGILF+SHSFS+EA KAATWD+EIDHLKF+YNG DLVIPE
Sbjct: 123 GRFTGHRPAGRPRDFTWIQALGILFKSHSFSVEATKAATWDDEIDHLKFTYNGDDLVIPE 182

Query: 184 GPLSIWYSEEKDVKVERVSSKNSAIVSLKDTAEILVNVVPVTKEDDRVHKYQVPADDCFA 243
           GPL++W   ++ VKVER+SSKNS +V+  +  EI VNVVPVTKEDDR+H Y+VP+ DCFA
Sbjct: 183 GPLAVWNPPDQSVKVERISSKNSVVVTFPNVVEISVNVVPVTKEDDRIHSYRVPSHDCFA 242

Query: 244 HLEVQFRFFNLSAKVDGVLGRTYRPDFENPAKPGVAMAVLGGEKEYKTESLFSTNCKTCI 303
           HLEVQFRF+ LS KV GVLGRTY+PDFENPA+ GVAM V+GGE EY+T SL S +C++C+
Sbjct: 243 HLEVQFRFYGLSPKVSGVLGRTYQPDFENPARQGVAMPVVGGEDEYRTTSLLSADCRSCV 302

Query: 304 FATGSGADHQETTELMKFGTLDCTRRSSAGYGIVCKK 340
           F  G  A+ QE + L+ +  LDCT +S +G GIVC+K
Sbjct: 303 FNPGRVAE-QEDSPLIGYNILDCTHQSGSGNGIVCRK 338

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302143065|emb|CBI20360.3| unnamed protein product [Vitis vinifera]

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 221/325 (68%), Positives = 263/325 (80%), Gaps = 3/325 (0%)

Query: 16  VSCVIQVKAEASVVYCSNPFSRCFDKEIECPFECPNTESDDPKAKVCYVNCDHPTCKPQC 75
           V  V+QVKA    V C+N  SRC+ K + CP ECP T S+DPKAKVCY+NC+ P CK +C
Sbjct: 21  VPSVVQVKA--YYVECTNKESRCYQKTLACPSECPYTYSEDPKAKVCYINCNSPQCKAEC 78

Query: 76  KHRIANCDSPGSACYDPRFIGGDGIVFYFHGKSNEHFSLVSDSELQINARFIGHRPAGRS 135
           KHR  NC+ PG+ACYDPRFIGGDG+VFYFHGKSNEHFSLVSD  LQIN RF GHRPAGR 
Sbjct: 79  KHRKPNCNGPGAACYDPRFIGGDGVVFYFHGKSNEHFSLVSDRNLQINGRFTGHRPAGRP 138

Query: 136 RDFTWIQALGILFQSHSFSLEAAKAATWDNEIDHLKFSYNGQDLVIPEGPLSIWYSEEKD 195
           RDFTWIQALGILF+SHSFS+EA KAATWD+EIDHLKF+YNG DLVIPEGPL++W   ++ 
Sbjct: 139 RDFTWIQALGILFKSHSFSVEATKAATWDDEIDHLKFTYNGDDLVIPEGPLAVWNPPDQS 198

Query: 196 VKVERVSSKNSAIVSLKDTAEILVNVVPVTKEDDRVHKYQVPADDCFAHLEVQFRFFNLS 255
           VKVER+SSKNS +V+  +  EI VNVVPVTKEDDR+H Y+VP+ DCFAHLEVQFRF+ LS
Sbjct: 199 VKVERISSKNSVVVTFPNVVEISVNVVPVTKEDDRIHSYRVPSHDCFAHLEVQFRFYGLS 258

Query: 256 AKVDGVLGRTYRPDFENPAKPGVAMAVLGGEKEYKTESLFSTNCKTCIFATGSGADHQET 315
            KV GVLGRTY+PDFENPA+ GVAM V+GGE EY+T SL S +C++C+F  G  A+ QE 
Sbjct: 259 PKVSGVLGRTYQPDFENPARQGVAMPVVGGEDEYRTTSLLSADCRSCVFNPGRVAE-QED 317

Query: 316 TELMKFGTLDCTRRSSAGYGIVCKK 340
           + L+ +  LDCT +S +G GIVC+K
Sbjct: 318 SPLIGYNILDCTHQSGSGNGIVCRK 342

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356544000|ref|XP_003540444.1| PREDICTED: uncharacterized protein LOC100781533 [Glycine max]

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 219/342 (64%), Positives = 272/342 (79%), Gaps = 5/342 (1%)

Query: 1   MEILK-SSVAIILVVIVSCVIQVKAEASVVYCSNPFSRCFDKEIECPFECPNTESDDPKA 59
           MEI K SS+ I  +V VS +I  KA  ++ YC    +RC+ K I CP ECP++E+++PK 
Sbjct: 1   MEITKRSSLLIFFLVFVSSLIHAKAYQNL-YCGRG-TRCYGKHITCPAECPDSETNNPKT 58

Query: 60  KVCYVNCDHPTCKPQCKHRIANCDSPGSACYDPRFIGGDGIVFYFHGKSNEHFSLVSDSE 119
           KVC ++C+ P CK  C+ R  NC++PGS CYDPRFIGGDG VFYFHGK+NEHF+LVSDS 
Sbjct: 59  KVCQIDCNKPICKAVCRSRKPNCNAPGSGCYDPRFIGGDGRVFYFHGKTNEHFTLVSDSN 118

Query: 120 LQINARFIGHRPAGRSRDFTWIQALGILFQSHSFSLEAAKAATWDNEIDHLKFSYNGQDL 179
           LQ+NARFIGHRP GRSRD+TWIQALGILF S +FSLEA K   W++E+DH KF+YNG  +
Sbjct: 119 LQMNARFIGHRPEGRSRDYTWIQALGILFNSKTFSLEATKTPQWNDELDHFKFTYNGNQV 178

Query: 180 VIPEGPLSIWYSEEKDVKVERVSSKNSAIVSLKDTAEILVNVVPVTKEDDRVHKYQVPAD 239
            + EG LS WY+EEKD+KVERV+SKN  +V+LKD AEILVNVVP+TKEDDR+H YQVP+D
Sbjct: 179 ALAEGSLSTWYTEEKDIKVERVASKNGVMVTLKDVAEILVNVVPITKEDDRIHNYQVPSD 238

Query: 240 DCFAHLEVQFRFFNLSAKVDGVLGRTYRPDFENPAKPGVAMAVLGGEKEYKTESLFSTNC 299
           DCFAHLEVQFRFF LS KVDGVLGRTYR DFENPAKPGVAM V+GGE +Y+T SL S +C
Sbjct: 239 DCFAHLEVQFRFFALSQKVDGVLGRTYRLDFENPAKPGVAMPVVGGEDKYRTNSLLSPHC 298

Query: 300 KTCIFATGSGADHQET-TELMKFGTLDCTRRSSAGYGIVCKK 340
            +C+++ GS  + + T  ++M++GTLDCT + S G GIVC+K
Sbjct: 299 GSCVYSQGSSTEKETTPQQVMEYGTLDCT-KFSYGLGIVCRK 339

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356549769|ref|XP_003543263.1| PREDICTED: uncharacterized protein LOC100788331 [Glycine max]

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 224/341 (65%), Positives = 270/341 (79%), Gaps = 8/341 (2%)

Query: 1   MEILK-SSVAIILVVIVSCVIQVKAEASVVYCSNPFSRCFDKEIECPFECPNTESDDPKA 59
           ME  K SS+ I L+V VS +I  KA  ++ YC    +RC+ K I CP ECPN+E+++PK 
Sbjct: 1   MEFTKTSSLLIFLLVFVSSLIHAKAYQNL-YCGRG-TRCYGKYITCPAECPNSETNNPKT 58

Query: 60  KVCYVNCDHPTCKPQCKHRIANCDSPGSACYDPRFIGGDGIVFYFHGKSNEHFSLVSDSE 119
           KVC + C+ PTCK  C+ R  NC++PGS CYDPRFIGGDG VFYFHGK+NEHFSLVSDS 
Sbjct: 59  KVCQIECNKPTCKAVCRSRKPNCNAPGSGCYDPRFIGGDGRVFYFHGKTNEHFSLVSDSN 118

Query: 120 LQINARFIGHRPAGRSRDFTWIQALGILFQSHSFSLEAAKAATWDNEIDHLKFSYNGQDL 179
           LQINARFIGHRP GRSRD+TWIQALGILF S SFSLEA K   W++E+DH KF+YN   +
Sbjct: 119 LQINARFIGHRPEGRSRDYTWIQALGILFNSKSFSLEATKTPQWNDELDHFKFTYNENQV 178

Query: 180 VIPEGPLSIWYSEEKDVKVERVSSKNSAIVSLKDTAEILVNVVPVTKEDDRVHKYQVPAD 239
            + EG LS W+SEEKD+KVERV+SKNS +V++KD AEILVNVVP+TKEDDR+H YQVP+D
Sbjct: 179 ALAEGSLSTWHSEEKDIKVERVASKNSVMVTVKDVAEILVNVVPITKEDDRIHNYQVPSD 238

Query: 240 DCFAHLEVQFRFFNLSAKVDGVLGRTYRPDFENPAKPGVAMAVLGGEKEYKTESLFSTNC 299
           DCFAHLEVQFRFF LS KVDGVLGRTYR DFENPAKPGVAM V+GGE +Y+T SL S +C
Sbjct: 239 DCFAHLEVQFRFFALSQKVDGVLGRTYRLDFENPAKPGVAMPVVGGEDKYRTNSLLSPDC 298

Query: 300 KTCIFATGSGADHQETTELMKFGTLDCTRRSSAGYGIVCKK 340
            +C+F+  S A+     E M++GTLDCT+ S+ G GIVC+K
Sbjct: 299 VSCVFSQESSAEK----ETMEYGTLDCTKFSN-GLGIVCRK 334

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225461342|ref|XP_002284614.1| PREDICTED: uncharacterized protein LOC100246927 [Vitis vinifera] gi|302143064|emb|CBI20359.3| unnamed protein product [Vitis vinifera]

 Score =  467 bits (1201), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 220/341 (64%), Positives = 273/341 (80%), Gaps = 4/341 (1%)

Query: 1   MEILKSS-VAIILVVIVSCVIQVKAEASVVYCSNPFSRCFDKEIECPFECPNTESDDPKA 59
           MEIL S+ + IIL+  V+ V Q+ AE+    C+N  S CF K I CP ECP + S + KA
Sbjct: 1   MEILSSNCLLIILLCFVAGVTQIDAESRT--CTNRNSPCFLKRITCPSECPTSSSTNSKA 58

Query: 60  KVCYVNCDHPTCKPQCKHRIANCDSPGSACYDPRFIGGDGIVFYFHGKSNEHFSLVSDSE 119
           KVCY+NC+ P C+ +CK+R ANC+SPG+AC DPRFIGGDGIVFYFHGK NEHFSLVSD  
Sbjct: 59  KVCYINCNSPLCQAECKNRKANCNSPGAACLDPRFIGGDGIVFYFHGKRNEHFSLVSDLN 118

Query: 120 LQINARFIGHRPAGRSRDFTWIQALGILFQSHSFSLEAAKAATWDNEIDHLKFSYNGQDL 179
           LQINA FIG RPAGR+RD+TWIQALGIL  SHSFSLEA +A  WD+EIDHLKFSY+G++L
Sbjct: 119 LQINAHFIGLRPAGRTRDYTWIQALGILVDSHSFSLEATRAVAWDDEIDHLKFSYDGKEL 178

Query: 180 VIPEGPLSIWYSEEKDVKVERVSSKNSAIVSLKDTAEILVNVVPVTKEDDRVHKYQVPAD 239
            IPEG LS W   E D+KVER S++NS +V+L + AEILVNVVP+TKEDDR+H YQ+P+D
Sbjct: 179 DIPEGHLSAWNFSENDLKVERTSNRNSVVVTLPEIAEILVNVVPITKEDDRIHNYQIPSD 238

Query: 240 DCFAHLEVQFRFFNLSAKVDGVLGRTYRPDFENPAKPGVAMAVLGGEKEYKTESLFSTNC 299
           DCFAHLEVQFRFF LS+KV+GVLG+TY+PDFENP KPGVAM V+GGE +Y+T SL S +C
Sbjct: 239 DCFAHLEVQFRFFGLSSKVEGVLGQTYQPDFENPVKPGVAMPVVGGEDKYRTTSLLSADC 298

Query: 300 KTCIFATGSGADHQETTELMKFGTLDCTRRSSAGYGIVCKK 340
           ++C+F+  +G   Q+ T +M +GTLDCT  +++G GIVC+K
Sbjct: 299 RSCLFSP-AGVFDQKDTLIMDYGTLDCTGGATSGMGIVCRK 338

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356546896|ref|XP_003541857.1| PREDICTED: uncharacterized protein LOC100818256 [Glycine max]

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 222/341 (65%), Positives = 268/341 (78%), Gaps = 8/341 (2%)

Query: 1   MEILK-SSVAIILVVIVSCVIQVKAEASVVYCSNPFSRCFDKEIECPFECPNTESDDPKA 59
           ME  K SS+ I L+V VS +I  KA  ++ YC    +RC+ K I CP ECPN+E+++PK 
Sbjct: 1   MEFTKTSSLLIFLLVFVSSLIHAKAYQNL-YCGRG-TRCYGKYITCPAECPNSETNNPKT 58

Query: 60  KVCYVNCDHPTCKPQCKHRIANCDSPGSACYDPRFIGGDGIVFYFHGKSNEHFSLVSDSE 119
           KVC + C+ PTCK   +    NC++PGS CYDPRFIGGDG VFYFHGK+NEHFSLVSDS 
Sbjct: 59  KVCQIECNKPTCKVAIRSARPNCNAPGSGCYDPRFIGGDGRVFYFHGKTNEHFSLVSDSN 118

Query: 120 LQINARFIGHRPAGRSRDFTWIQALGILFQSHSFSLEAAKAATWDNEIDHLKFSYNGQDL 179
           LQINARFIGHRP GRSRD+TWIQALGILF S SFSLEA K   W++E+DH KF+YN   +
Sbjct: 119 LQINARFIGHRPEGRSRDYTWIQALGILFNSKSFSLEATKTPQWNDELDHFKFTYNENQV 178

Query: 180 VIPEGPLSIWYSEEKDVKVERVSSKNSAIVSLKDTAEILVNVVPVTKEDDRVHKYQVPAD 239
            + EG LS W+SEEKD+KVERV+SKNS +V++KD AEILVNVVP+TKEDDR+H YQVP+D
Sbjct: 179 ALAEGSLSTWHSEEKDIKVERVASKNSVMVTVKDVAEILVNVVPITKEDDRIHNYQVPSD 238

Query: 240 DCFAHLEVQFRFFNLSAKVDGVLGRTYRPDFENPAKPGVAMAVLGGEKEYKTESLFSTNC 299
           DCFAHLEVQFRFF LS KVDGVLGRTYR DFENPAKPGVAM V+GGE +Y+T SL S +C
Sbjct: 239 DCFAHLEVQFRFFALSQKVDGVLGRTYRLDFENPAKPGVAMPVVGGEDKYRTNSLLSPDC 298

Query: 300 KTCIFATGSGADHQETTELMKFGTLDCTRRSSAGYGIVCKK 340
            +C+F+  S A+     E M++GTLDCT+ S+ G GIVC+K
Sbjct: 299 VSCVFSQESSAEK----ETMEYGTLDCTKFSN-GLGIVCRK 334

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224117262|ref|XP_002317524.1| predicted protein [Populus trichocarpa] gi|222860589|gb|EEE98136.1| predicted protein [Populus trichocarpa]

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 204/304 (67%), Positives = 248/304 (81%), Gaps = 2/304 (0%)

Query: 38  CFDKEIECPFECPNTESDDPKA-KVCYVNCDHPTCKPQCKHRIANCDSPGSACYDPRFIG 96
           C  K++ CP ECP     DPK  KVC +NC+ P C+ +CK    NCD+PG+AC DPRFIG
Sbjct: 1   CARKKMACPAECPKANPTDPKVRKVCRLNCNSPVCQTECKRIKPNCDAPGAACLDPRFIG 60

Query: 97  GDGIVFYFHGKSNEHFSLVSDSELQINARFIGHRPAGRSRDFTWIQALGILFQSHSFSLE 156
           GDGIVFYFHGKSNEHFSLVSD  LQINARFIG RPAGR+RDFTWIQALGILF SHSFSLE
Sbjct: 61  GDGIVFYFHGKSNEHFSLVSDLNLQINARFIGLRPAGRTRDFTWIQALGILFDSHSFSLE 120

Query: 157 AAKAATWDNEIDHLKFSYNGQDLVIPEGPLSIWYSEEKDVKVERVSSKNSAIVSLKDTAE 216
           A +A+TW+ E+DHLKFS+NG+DL+IPEG LS W S + D+KV+R SSKNS +V+L + AE
Sbjct: 121 ATEASTWNGEVDHLKFSHNGEDLIIPEGQLSTWQSPDSDIKVQRTSSKNSVLVTLPEVAE 180

Query: 217 ILVNVVPVTKEDDRVHKYQVPADDCFAHLEVQFRFFNLSAKVDGVLGRTYRPDFENPAKP 276
           I +NVVPVTKEDDR+H YQ+P+DDCFAHLEVQF+FF LS+KV+GV+GRTY+PDF+NPAKP
Sbjct: 181 ISINVVPVTKEDDRIHNYQIPSDDCFAHLEVQFQFFGLSSKVEGVIGRTYQPDFKNPAKP 240

Query: 277 GVAMAVLGGEKEYKTESLFSTNCKTCIFATGSGADHQETTELMKFGTLDCTRRSSAGYGI 336
           GVAM V+GGE+ ++T SL S +C  C+F+  +G   Q+ T LM FG LDCT  SS+G+GI
Sbjct: 241 GVAMPVVGGEEMFRTTSLLSADCGACVFSP-AGVLDQKDTLLMDFGKLDCTGGSSSGHGI 299

Query: 337 VCKK 340
           VC+K
Sbjct: 300 VCRK 303

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15234120|ref|NP_194470.1| late embryogenesis abundant protein-like protein [Arabidopsis thaliana] gi|3269301|emb|CAA19734.1| putative protein [Arabidopsis thaliana] gi|7269594|emb|CAB81390.1| putative protein [Arabidopsis thaliana] gi|23296469|gb|AAN13065.1| unknown protein [Arabidopsis thaliana] gi|332659932|gb|AEE85332.1| late embryogenesis abundant protein-like protein [Arabidopsis thaliana]

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 203/341 (59%), Positives = 253/341 (74%), Gaps = 1/341 (0%)

Query: 1   MEILKSSVAIILVVIVSCVIQVKAEASVVYCS-NPFSRCFDKEIECPFECPNTESDDPKA 59
           ME+ KSS+ +I+ V+ SC + VKA     YC  N   RC  + I+CP ECP     + + 
Sbjct: 1   MEVPKSSLLMIIFVVASCFLHVKAWHGQTYCGGNATPRCQLRYIDCPEECPTEMFPNSQN 60

Query: 60  KVCYVNCDHPTCKPQCKHRIANCDSPGSACYDPRFIGGDGIVFYFHGKSNEHFSLVSDSE 119
           K+C+V+C  P C+  C+    NC+S GS C DPRFIGGDGIVFYFHGKSNEHFS+VSD +
Sbjct: 61  KICWVDCFKPLCEAVCRAVKPNCESYGSICLDPRFIGGDGIVFYFHGKSNEHFSIVSDPD 120

Query: 120 LQINARFIGHRPAGRSRDFTWIQALGILFQSHSFSLEAAKAATWDNEIDHLKFSYNGQDL 179
            QINARF GHRPAGR+RDFTWIQALG LF SH FSLE  K ATWD+ +DHLKF+ +GQDL
Sbjct: 121 FQINARFTGHRPAGRTRDFTWIQALGFLFNSHKFSLETTKVATWDSNLDHLKFTIDGQDL 180

Query: 180 VIPEGPLSIWYSEEKDVKVERVSSKNSAIVSLKDTAEILVNVVPVTKEDDRVHKYQVPAD 239
           +IP+  LS WYS +KD+K+ER++ KNS IV++KD AEI+VNVVPVTKEDDR+H Y++P D
Sbjct: 181 IIPQETLSTWYSSDKDIKIERLTEKNSVIVTIKDKAEIMVNVVPVTKEDDRIHNYKLPVD 240

Query: 240 DCFAHLEVQFRFFNLSAKVDGVLGRTYRPDFENPAKPGVAMAVLGGEKEYKTESLFSTNC 299
           DCFAH EVQF+F NLS KVDG+LGRTYRPDF+NPAKPGV M V+GGE  ++T SL S  C
Sbjct: 241 DCFAHFEVQFKFINLSPKVDGILGRTYRPDFKNPAKPGVVMPVVGGEDSFRTSSLLSHVC 300

Query: 300 KTCIFATGSGADHQETTELMKFGTLDCTRRSSAGYGIVCKK 340
           KTC+F+               +  LDC+R +S+GYG+VC+K
Sbjct: 301 KTCLFSEDPAVASGSVKPKSTYALLDCSRGASSGYGLVCRK 341

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	340
TAIR|locus:2162555	337	AT5G54370 "AT5G54370" [Arabido	0.926	0.934	0.708	9.6e-128
TAIR|locus:2131714	341	AT4G27400 [Arabidopsis thalian	0.914	0.912	0.612	4.3e-109
TAIR|locus:2011010	347	AT1G54890 "AT1G54890" [Arabido	0.911	0.893	0.552	1.4e-96
TAIR|locus:2175193	338	AT5G60520 "AT5G60520" [Arabido	0.794	0.798	0.496	6.5e-74
TAIR|locus:2175198	439	AT5G60530 "AT5G60530" [Arabido	0.782	0.605	0.476	4.8e-71
TAIR|locus:2090674	559	AT3G19430 [Arabidopsis thalian	0.870	0.529	0.423	5.2e-65

TAIR|locus:2162555 AT5G54370 "AT5G54370" [Arabidopsis thaliana (taxid:3702)]

 Score = 1254 (446.5 bits), Expect = 9.6e-128, P = 9.6e-128
 Identities = 224/316 (70%), Positives = 264/316 (83%)

Query:    25 EASVVYCSNPFSRCFDKEIECPFECPNTESDDPKAKVCYVNCDHPTCKPQCKHRIANCDS 84
             +A+ VYCSNP++RC+ K I CP ECP+  + + K KVCY +CD PTCK QC+ R  NC+ 
Sbjct:    23 KAAGVYCSNPYTRCYRKYIRCPEECPSKTAMNSKNKVCYADCDRPTCKSQCRMRKPNCNR 82

Query:    85 PGSACYDPRFIGGDGIVFYFHGKSNEHFSLVSDSELQINARFIGHRPAGRSRDFTWIQAL 144
             PGSACYDPRFIGGDGIVFYFHGKSNE FSLVSDS+LQIN RFIGHRPAGR+RDFTWIQAL
Sbjct:    83 PGSACYDPRFIGGDGIVFYFHGKSNEEFSLVSDSDLQINGRFIGHRPAGRARDFTWIQAL 142

Query:   145 GILFQSHSFSLEAAKAATWDNEIDHLKFSYNGQDLVIPEGPLSIWYSEEKDVKVERVSSK 204
             G LF S+ FSLEAAK A+WDNEIDHLKFSY+GQDL +PE  LS WYS  KD+K+ERVS +
Sbjct:   143 GFLFNSNKFSLEAAKTASWDNEIDHLKFSYDGQDLSVPEETLSTWYSPNKDIKIERVSMR 202

Query:   205 NSAIVSLKDTAEILVNVVPVTKEDDRVHKYQVPADDCFAHLEVQFRFFNLSAKVDGVLGR 264
             NS IV++KD AEI++NVVPVTKEDDR+H Y+VP+DDCFAHLEVQFRFFNLS KVDG+LGR
Sbjct:   203 NSVIVTIKDKAEIMINVVPVTKEDDRIHSYKVPSDDCFAHLEVQFRFFNLSPKVDGILGR 262

Query:   265 TYRPDFENPAKPGVAMAVLGGEKEYKTESLFSTNCKTCIFATGSGADHQETTELMKFGTL 324
             TYRPDF+NPAKPGVAM V+GGE  +KT SL S +CKTCIF+  S A+       +++ TL
Sbjct:   263 TYRPDFQNPAKPGVAMPVVGGEDSFKTSSLLSNDCKTCIFSE-SQAEIDSVKSEIEYATL 321

Query:   325 DCTRRSSAGYGIVCKK 340
             DCTR +S+GYGIVC+K
Sbjct:   322 DCTRGASSGYGIVCRK 337

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2131714 AT4G27400 [Arabidopsis thaliana (taxid:3702)]

 Score = 1078 (384.5 bits), Expect = 4.3e-109, P = 4.3e-109
 Identities = 191/312 (61%), Positives = 235/312 (75%)

Query:    30 YCS-NPFSRCFDKEIECPFECPNTESDDPKAKVCYVNCDHPTCKPQCKHRIANCDSPGSA 88
             YC  N   RC  + I+CP ECP     + + K+C+V+C  P C+  C+    NC+S GS 
Sbjct:    30 YCGGNATPRCQLRYIDCPEECPTEMFPNSQNKICWVDCFKPLCEAVCRAVKPNCESYGSI 89

Query:    89 CYDPRFIGGDGIVFYFHGKSNEHFSLVSDSELQINARFIGHRPAGRSRDFTWIQALGILF 148
             C DPRFIGGDGIVFYFHGKSNEHFS+VSD + QINARF GHRPAGR+RDFTWIQALG LF
Sbjct:    90 CLDPRFIGGDGIVFYFHGKSNEHFSIVSDPDFQINARFTGHRPAGRTRDFTWIQALGFLF 149

Query:   149 QSHSFSLEAAKAATWDNEIDHLKFSYNGQDLVIPEGPLSIWYSEEKDVKVERVSSKNSAI 208
              SH FSLE  K ATWD+ +DHLKF+ +GQDL+IP+  LS WYS +KD+K+ER++ KNS I
Sbjct:   150 NSHKFSLETTKVATWDSNLDHLKFTIDGQDLIIPQETLSTWYSSDKDIKIERLTEKNSVI 209

Query:   209 VSLKDTAEILVNVVPVTKEDDRVHKYQVPADDCFAHLEVQFRFFNLSAKVDGVLGRTYRP 268
             V++KD AEI+VNVVPVTKEDDR+H Y++P DDCFAH EVQF+F NLS KVDG+LGRTYRP
Sbjct:   210 VTIKDKAEIMVNVVPVTKEDDRIHNYKLPVDDCFAHFEVQFKFINLSPKVDGILGRTYRP 269

Query:   269 DFENPAKPGVAMAVLGGEKEYKTESLFSTNCKTCIFATGSGADHQETTELMKFGTLDCTR 328
             DF+NPAKPGV M V+GGE  ++T SL S  CKTC+F+               +  LDC+R
Sbjct:   270 DFKNPAKPGVVMPVVGGEDSFRTSSLLSHVCKTCLFSEDPAVASGSVKPKSTYALLDCSR 329

Query:   329 RSSAGYGIVCKK 340
              +S+GYG+VC+K
Sbjct:   330 GASSGYGLVCRK 341

GO:0005576 "extracellular region" evidence=ISM

TAIR|locus:2011010 AT1G54890 "AT1G54890" [Arabidopsis thaliana (taxid:3702)]

 Score = 960 (343.0 bits), Expect = 1.4e-96, P = 1.4e-96
 Identities = 173/313 (55%), Positives = 228/313 (72%)

Query:    31 CSNPFSRCFDKEIECPFECPNTESDDPKAKVCYVNCDHPTCKPQCKHRIANCDSPGSACY 90
             C    S CF K+  CP +CP+    +   K C ++C +P CK  C++R  NC+  GSAC 
Sbjct:    35 CFQRKSPCFLKKQTCPKQCPSFSPPNGSTKACVIDCFNPICKATCRNRKPNCNGKGSACL 94

Query:    91 DPRFIGGDGIVFYFHGKSNEHFSLVSDSELQINARFIGHRPAGRSRDFTWIQALGILF-- 148
             DPRFIGGDGIVFYFHGK +EHF+L+SD + Q+NARFIG RP GR+RDFTWIQ+LG++F  
Sbjct:    95 DPRFIGGDGIVFYFHGKRDEHFALISDVDFQVNARFIGLRPNGRARDFTWIQSLGLIFGP 154

Query:   149 QSHSFSLEAAKAATWDNEIDHLKFSYNGQDLVIPEGPLSIWYSEEKD-VKVERVSSKNSA 207
              S +FSLEA KA  WD+++DHL+ SY G+++ +P+G  S+W     D +K+ER S  NS 
Sbjct:   155 NSKTFSLEATKAEKWDHQVDHLRLSYEGKEISLPKGDTSVWSPPLGDYIKIERTSDINSV 214

Query:   208 IVSLKDTAEILVNVVPVTKEDDRVHKYQVPADDCFAHLEVQFRFFNLSAKVDGVLGRTYR 267
             +V+L+D AEI +NVVPVTKEDD +HKY +P DDCFAHLEVQFRF  LS+ V+GVLGRTY+
Sbjct:   215 LVTLQDIAEIWINVVPVTKEDDIIHKYGIPEDDCFAHLEVQFRFLKLSSNVEGVLGRTYK 274

Query:   268 PDFENPAKPGVAMAVLGGEKEYKTESLFSTNCKTCIFATGSGADHQETTELMKFGTLDCT 327
              DF+NPAKPGVAM V+GGE +Y+T SL  T+C  C+++ GS +  +    L+   T+DCT
Sbjct:   275 EDFKNPAKPGVAMPVVGGEDKYRTASLLETSCNACVYSGGSRSLDKIEPLLLNQNTVDCT 334

Query:   328 RRSSAGYGIVCKK 340
               SS+G GI C+K
Sbjct:   335 GGSSSGVGIFCRK 347

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2175193 AT5G60520 "AT5G60520" [Arabidopsis thaliana (taxid:3702)]

 Score = 746 (267.7 bits), Expect = 6.5e-74, P = 6.5e-74
 Identities = 138/278 (49%), Positives = 188/278 (67%)

Query:    38 CFDKEIECPFECPNTESD-DPKAKVCYVNCDHPTCKPQCKHRIANCDSPGSACYDPRFIG 96
             C  K + CP ECP  +   + K K C+++C    C+  CK R ANC+  GS CYDPRF+G
Sbjct:    59 CNQKILTCPKECPERKPKMNKKKKACFIDCSSK-CEVTCKWRKANCNGYGSLCYDPRFVG 117

Query:    97 GDGIVFYFHGKSNEHFSLVSDSELQINARFIGHRPAGRSRDFTWIQALGILFQSHSFSLE 156
             GDG++FYFHG  + +F++VSD  LQINA FIG RPAGR+RDFTW+QA  ++F SH+  + 
Sbjct:   118 GDGVMFYFHGNKDGNFAIVSDENLQINAHFIGTRPAGRTRDFTWVQAFSVMFDSHNLVIA 177

Query:   157 AAKAATWDNEIDHLKFSYNGQDLVIP-EGPLSIWYSE--EKDVKVERVSSKNSAIVSLKD 213
             A K A+WD+ +D L   +NG+++ +P EG    W  +  E++V VER   +N+  V++  
Sbjct:   178 AKKVASWDDSVDSLVVRWNGEEVEVPTEGEAE-WRIDLDEREVIVERTDERNNVRVTVSG 236

Query:   214 TAEILVNVVPVTKEDDRVHKYQVPADDCFAHLEVQFRFFNLSAKVDGVLGRTYRPDFENP 273
               +I + V P+ KE+DRVHKYQ+P DD FAHLE QF+FFNLS  V+GVLG+TYRP + +P
Sbjct:   237 IVQIDIQVRPIGKEEDRVHKYQLPKDDAFAHLETQFKFFNLSDLVEGVLGKTYRPGYVSP 296

Query:   274 AKPGVAMAVLGGEKEYKTESLFSTNCKTCIFA--TGSG 309
              K GV M ++GGE +Y+T SLFS  C  C F   TG G
Sbjct:   297 VKTGVPMPMMGGEDKYQTPSLFSPLCNVCRFQGKTGPG 334

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

TAIR|locus:2175198 AT5G60530 "AT5G60530" [Arabidopsis thaliana (taxid:3702)]

 Score = 719 (258.2 bits), Expect = 4.8e-71, P = 4.8e-71
 Identities = 129/271 (47%), Positives = 179/271 (66%)

Query:    38 CFDKEIECPFECPNTESDDPK-AKVCYVNCDHPTCKPQCKHRIANCDSPGSACYDPRFIG 96
             C+ K + CP ECP  +    K  K C+++C +  C+  CK R  NC+  GS CYDPRF+G
Sbjct:   159 CYYKTLVCPGECPKRKPTKNKNTKGCFIDCTNK-CEATCKWRKTNCNGYGSLCYDPRFVG 217

Query:    97 GDGIVFYFHGKSNEHFSLVSDSELQINARFIGHRPAGRSRDFTWIQALGILFQSHSFSLE 156
             GDG++FYFHG    +F++VSD+ LQINA FIG RP GR+RDFTW+QAL ++F++H   + 
Sbjct:   218 GDGVMFYFHGSKGGNFAIVSDNNLQINAHFIGTRPVGRTRDFTWVQALNVMFENHKLVIT 277

Query:   157 AAKAATWDNEIDHLKFSYNGQDLVIPEGPLSIWYS---EEKDVKVERVSSKNSAIVSLKD 213
             A +   WD   D     Y+G+ + +PE   S W     ++KD+ +ER   +NS  V + D
Sbjct:   278 ANRVNQWDETSDAFTIRYDGELITLPEDEQSEWREISGQKKDIIIERTDERNSVRVLVSD 337

Query:   214 TAEILVNVVPVTKEDDRVHKYQVPADDCFAHLEVQFRFFNLSAKVDGVLGRTYRPDFENP 273
               ++ + V P+ KE++RVH YQ+P DD FAHLE QF+F +LS  V+GVLG+TYRPD+ + 
Sbjct:   338 LVQMDIRVRPIGKEENRVHNYQLPQDDAFAHLETQFKFLDLSELVEGVLGKTYRPDYVSS 397

Query:   274 AKPGVAMAVLGGEKEYKTESLFSTNCKTCIF 304
             AK GV M VLGGE +Y+T SLFS  C+ C F
Sbjct:   398 AKTGVPMPVLGGEDKYQTPSLFSPTCRLCRF 428

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0000041 "transition metal ion transport" evidence=RCA

TAIR|locus:2090674 AT3G19430 [Arabidopsis thaliana (taxid:3702)]

 Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
 Identities = 135/319 (42%), Positives = 191/319 (59%)

Query:    26 ASVVYCSNPFSRCFDKEIECPFECPNTESDDPKAKVCYVNCDHPTCKPQCKHRIANCDSP 85
             A  V C    S C+  E  CP +CP +         C V+C   TCKP C     NCD P
Sbjct:   260 AKRVRCKKQRSPCYGVEYTCPADCPRS---------CQVDC--VTCKPVC-----NCDKP 303

Query:    86 GSACYDPRFIGGDGIVFYFHGKSNEHFSLVSDSELQINARFIGHRPAGRSRDFTWIQALG 145
             GS C DPRFIGGDG+ FYFHGK + +F L+SD  L INA FIG R AG +RDFTW+Q++ 
Sbjct:   304 GSVCQDPRFIGGDGLTFYFHGKKDSNFCLISDPNLHINAHFIGKRRAGMARDFTWVQSIA 363

Query:   146 ILFQSHSFSLEAAKAATWDNEIDHLKFSYNGQDLVIPEGPLSIWYSEE---KDVKVERVS 202
             ILF +H   + A K ATWD+ +D +  S++G  + +P+   + W S      +V V+RV+
Sbjct:   364 ILFGTHRLYVGALKTATWDDSVDRIAVSFDGNVISLPQLDGARWTSSPGVYPEVSVKRVN 423

Query:   203 SK-NSAIVSLKDTAEILVNVVPVTKEDDRVHKYQVPADDCFAHLEVQFRFFNLSAKVDGV 261
             +  N+  V ++   +I   VVP+T ED R+H Y V  DDC AHL++ F+F +LS  VDGV
Sbjct:   424 TDTNNLEVEVEGLLKITARVVPITMEDSRIHGYDVKEDDCLAHLDLGFKFQDLSDNVDGV 483

Query:   262 LGRTYRPDFENPAKPGVAMAVLGGEKEYKTESLFSTNCKTCIFATGSGADHQETTELMKF 321
             LG+TYR ++ +  K GV M V+GG++E++T  LF+ +C    F TG+G  +   ++L + 
Sbjct:   484 LGQTYRSNYVSRVKIGVHMPVMGGDREFQTTGLFAPDCSAARF-TGNGDSNNGRSKL-EL 541

Query:   322 GTLDCTRRSSAGYGIVCKK 340
               + C      G G+VCK+
Sbjct:   542 PEMSCAS-GLGGKGVVCKR 559


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.135   0.423    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      340       318   0.00083  116 3  11 22  0.39    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  619 (66 KB)
  Total size of DFA:  257 KB (2137 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  26.28u 0.07s 26.35t   Elapsed:  00:00:01
  Total cpu time:  26.28u 0.07s 26.35t   Elapsed:  00:00:01
  Start:  Sat May 11 16:09:03 2013   End:  Sat May 11 16:09:04 2013

GO:0005634 "nucleus" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	340
pfam06830	57	pfam06830, Root_cap, Root cap	4e-26

>gnl|CDD|191617 pfam06830, Root_cap, Root cap

 Score = 98.1 bits (245), Expect = 4e-26
 Identities = 31/57 (54%), Positives = 40/57 (70%)

Query: 248 QFRFFNLSAKVDGVLGRTYRPDFENPAKPGVAMAVLGGEKEYKTESLFSTNCKTCIF 304
            F+F++LS  V GVLG+TYRPD+ NP K G +M V+GGE +Y T SLFS +C    F
Sbjct: 1   GFKFYDLSDDVHGVLGQTYRPDYVNPVKVGASMPVMGGEDKYATSSLFSADCAVARF 57

The cells at the periphery of the root cap are continuously sloughed off from the root into the mucilage, and are thought to be programmed to die.This family represents a conserved region approximately 60 residues in length within plant root cap proteins, which may be involved in the process. Length = 57

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	340
PF06830	57	Root_cap: Root cap; InterPro: IPR009646 The cells	100.0
PF06668	188	ITI_HC_C: Inter-alpha-trypsin inhibitor heavy chai	98.94
smart00216	162	VWD von Willebrand factor (vWF) type D domain. Von	97.93
PF00094	159	VWD: von Willebrand factor type D domain; InterPro	97.21
cd01951	223	lectin_L-type legume lectins. The L-type (legume-t	87.59

>PF06830 Root_cap: Root cap; InterPro: IPR009646 The cells at the periphery of the root cap are continuously sloughed off from the root into the mucilage, and are thought to be programmed to die []

Probab=100.00  E-value=7.2e-37  Score=230.72  Aligned_cols=57  Identities=61%  Similarity=1.183  Sum_probs=56.5

Q ss_pred             eeEEeccCcccccccceeccCCCcccCCCCccceeecCCCcccccCccccCCCceee
Q 039782          248 QFRFFNLSAKVDGVLGRTYRPDFENPAKPGVAMAVLGGEKEYKTESLFSTNCKTCIF  304 (340)
Q Consensus       248 ~FKF~~Lsd~V~GVLGQTYRpdyvn~vk~gv~MPvmGGe~~Y~tSsLfsaDC~v~rF  304 (340)
                      ||||++|||+|||||||||||||+||+|+||+|||||||++|+|||||||||++|||
T Consensus         1 ~FkF~~Lt~~V~GVLGQTYr~~yvn~vk~g~~MPvmGG~~~y~ts~lfs~DC~v~rF   57 (57)
T PF06830_consen    1 QFKFYSLTDDVHGVLGQTYRPDYVNPVKVGVAMPVMGGEDKYRTSSLFSTDCAVCRF   57 (57)
T ss_pred             CceeeccccccceeccccccCCcccccccCCCCccccCCccceeccccccCcchhcC
Confidence            799999999999999999999999999999999999999999999999999999998

This family represents a conserved region approximately 60 residues in length within plant root cap proteins, which may be involved in the process.

>PF06668 ITI_HC_C: Inter-alpha-trypsin inhibitor heavy chain C-terminus; InterPro: IPR010600 This entry represents the C-terminal region of inter-alpha-trypsin inhibitor heavy chains

Probab=98.94  E-value=2.3e-08  Score=90.56  Aligned_cols=133  Identities=23%  Similarity=0.363  Sum_probs=93.9

Q ss_pred             CCcceeeeEEeecCCCC-CCCCceeEEeeeeeecceeEEEeeeecccCCCCCceEEEEECCeEeecCCCCCceeEeCCCC
Q 039782          117 DSELQINARFIGHRPAG-RSRDFTWIQALGILFQSHSFSLEAAKAATWDNEIDHLKFSYNGQDLVIPEGPLSIWYSEEKD  195 (340)
Q Consensus       117 D~~LhINAHFIG~r~~g-~~RDfTWiQalgi~F~~H~l~i~A~k~~~Wd~~vD~l~vt~dGe~v~ip~~~~a~W~s~~~~  195 (340)
                      |..+.+|.+.||..++. ..+-=|+...|||.|+.-.+.|+.+        -++++|+=+++...++=...+.-.  .++
T Consensus         1 ~sGi~VnGqliGak~~~~~~~~~TYF~~i~I~~~~~~~~I~vt--------~~~I~l~~g~~~~~l~w~~t~~~~--~~~   70 (188)
T PF06668_consen    1 DSGITVNGQLIGAKKPPGEKKLRTYFGRIGITFQKPDVKIEVT--------PEKITLTDGRRRSVLSWSDTASVK--QPG   70 (188)
T ss_pred             CCCEEEeCEEccCCCCCCCCCCCceEEEEEEEECCCCeEEEEE--------ccEEEEecCCCceeEeEcceEEEc--cCc
Confidence            67899999999985543 8899999999999999888888888        677777655566655322222222  267


Q ss_pred             eEEEEEcCCCeEEEEecccEEEEEEEEeccccCCcccccCCCCCCccceeeeeeEEe---ccCcccccccceeccC-CCc
Q 039782          196 VKVERVSSKNSAIVSLKDTAEILVNVVPVTKEDDRVHKYQVPADDCFAHLEVQFRFF---NLSAKVDGVLGRTYRP-DFE  271 (340)
Q Consensus       196 l~V~Rt~~~N~V~V~l~g~~~i~~~VVPit~eDsriHnYg~~~dD~faHLel~FKF~---~Lsd~V~GVLGQTYRp-dyv  271 (340)
                      |.|+=. ..-.|.|++.+-+++.+-.-.+    .+=|.|      -.-||  +|-..   .||++|||+|||-|++ +|.
T Consensus        71 l~v~v~-k~~~l~v~~~~~v~F~Il~Hr~----~~~~~~------~~d~L--GfYi~ds~~lS~~vhGLLGQF~~~~~~~  137 (188)
T PF06668_consen   71 LEVSVN-KNKNLTVTLGDGVTFVILLHRV----WKKHPY------QRDFL--GFYILDSHGLSPSVHGLLGQFYHEPDFE  137 (188)
T ss_pred             EEEEEE-CCceEEEEeCCceEEEEEEEee----cCCCCC------CCCee--EEEecCCCCCCCcccccccCccCCCceE
Confidence            777643 3446999999999999865544    222233      23344  44333   6899999999999999 765


Q ss_pred             c
Q 039782          272 N  272 (340)
Q Consensus       272 n  272 (340)
                      -
T Consensus       138 v  138 (188)
T PF06668_consen  138 V  138 (188)
T ss_pred             E
Confidence            3

Inter-alpha-trypsin inhibitors are glycoproteins with a high inhibitory activity against trypsin, built up from different combinations of four polypeptides: bikunin and the three heavy chains that belong to this family (HC1, HC2, HC3). The heavy chains do not have any protease inhibitory properties but have the capacity to interact in vitro and in vivo with hyaluronic acid, which promotes the stability of the extra-cellular matrix. This domain is associated with the VWA domain IPR002035 from INTERPRO.; GO: 0004867 serine-type endopeptidase inhibitor activity, 0030212 hyaluronan metabolic process

>smart00216 VWD von Willebrand factor (vWF) type D domain

Probab=97.93  E-value=0.00048  Score=58.06  Aligned_cols=116  Identities=18%  Similarity=0.229  Sum_probs=77.2

Q ss_pred             CcccCCeeeccCCceEEEecCCCCceeeecC-C---cceeeeEEeecCCCCCCCCceeEEeeeeeecceeEEEeeeeccc
Q 039782           87 SACYDPRFIGGDGIVFYFHGKSNEHFSLVSD-S---ELQINARFIGHRPAGRSRDFTWIQALGILFQSHSFSLEAAKAAT  162 (340)
Q Consensus        87 s~C~DPRFiGGDG~~FYFHGkkd~~FcivSD-~---~LhINAHFIG~r~~g~~RDfTWiQalgi~F~~H~l~i~A~k~~~  162 (340)
                      ++-+||++.=.||.+|.|+|  +-.|.|+.| .   ++.|-++.....    . +-+|..++-|..+++.+.+...    
T Consensus        13 ~v~g~~~~~TFDg~~y~~~g--~C~yvL~~~~~~~~~f~V~~~~~~~~----~-~~~~~~~v~v~~~~~~i~~~~~----   81 (162)
T smart00216       13 SVSGDPHYTTFDGVAYTFPG--NCYYVLAQDCSSEPTFSVLLKNVPCG----G-GATCLKSVKVELNGDEIELKDD----   81 (162)
T ss_pred             EEcCCCCeECcCCCEEeecC--ceEEEEEEECCCCCCEEEEEEecCCC----C-CceEEEEEEEEECCEEEEEEeC----
Confidence            47889999999999999966  667999888 3   555666554322    1 2689999999999988777531    


Q ss_pred             CCCCCceEEEEECCeEeecCCCCCce---eEeCCCCeEEEEEcCCCeEEEEecccEEEEEEEE
Q 039782          163 WDNEIDHLKFSYNGQDLVIPEGPLSI---WYSEEKDVKVERVSSKNSAIVSLKDTAEILVNVV  222 (340)
Q Consensus       163 Wd~~vD~l~vt~dGe~v~ip~~~~a~---W~s~~~~l~V~Rt~~~N~V~V~l~g~~~i~~~VV  222 (340)
                            .++|.+||+++.+|......   |... ..+.|..+  .-+|.|...|.-.+.+.+-
T Consensus        82 ------~~~v~vng~~v~~p~~~~~~~v~~~~~-~~~~v~~~--~~gl~v~~dg~~~~~V~~~  135 (162)
T smart00216       82 ------NGTVTVNGQQVSLPYKTSDGSIQIRSS-GGYVVVIT--SLGLQVTFDGLTLLSVQLP  135 (162)
T ss_pred             ------CCEEEECCEEeeCCcCcCCceEEEEEC-ceEEEEEC--CCCEEEEECCCcEEEEEEC
Confidence                  68999999999998743321   1211 12333322  4455555555444444443

Von Willebrand factor contains several type D domains: D1 and D2 are present within the N-terminal propeptide whereas the remaining D domains are required for multimerisation.

>PF00094 VWD: von Willebrand factor type D domain; InterPro: IPR001846 A family of growth regulators (originally called cef10, connective tissue growth factor, fisp-12, cyr61, or, alternatively, beta IG-M1 and beta IG-M2), all belong to immediate-early genes expressed after induction by growth factors or certain oncogenes

Probab=97.21  E-value=0.0058  Score=50.12  Aligned_cols=111  Identities=19%  Similarity=0.257  Sum_probs=72.6

Q ss_pred             cccCCeeeccCCceEEEecCCCCcee--eecCCc----ceeeeEEeecCCCCCCCCceeEEeeeeeecceeEEEeeeecc
Q 039782           88 ACYDPRFIGGDGIVFYFHGKSNEHFS--LVSDSE----LQINARFIGHRPAGRSRDFTWIQALGILFQSHSFSLEAAKAA  161 (340)
Q Consensus        88 ~C~DPRFiGGDG~~FYFHGkkd~~Fc--ivSD~~----LhINAHFIG~r~~g~~RDfTWiQalgi~F~~H~l~i~A~k~~  161 (340)
                      +=+||+|+=.||..|.|+|  +..|-  |+.|..    +++.+...  +.+.....-+++.+|.|.+++|.+.|....  
T Consensus         3 v~g~~~~~TFDg~~y~~~~--~c~y~~vl~~~~~~~~~~~~~v~~~--~~~~~~~~~~~~~~v~i~~~~~~i~i~~~~--   76 (159)
T PF00094_consen    3 VYGDPHITTFDGKSYSFPG--NCTYILVLAQDCSSDPKFSFSVENK--NCPCGQSGTSCTRKVTIRLGNHEIEIKPNN--   76 (159)
T ss_pred             EeCCCeEEcCCCCEEecCC--CceEEEEeecccCccccccccceee--eeccCCCCcceeeEEEEEcccceeeEeccc--
Confidence            4579999999999999999  56788  776633    34444432  111223333499999999999988887652  


Q ss_pred             cCCCCCceEEEEECCeEeecCCCCCceeEeCCCCeEEEEEcCCCeEEEEecccEEEEEE
Q 039782          162 TWDNEIDHLKFSYNGQDLVIPEGPLSIWYSEEKDVKVERVSSKNSAIVSLKDTAEILVN  220 (340)
Q Consensus       162 ~Wd~~vD~l~vt~dGe~v~ip~~~~a~W~s~~~~l~V~Rt~~~N~V~V~l~g~~~i~~~  220 (340)
                             .+.+++||+++..|...        .+..|+++. ...+.|....-++|.+.
T Consensus        77 -------~~~v~vng~~~~~p~~~--------~~~~i~~~~-~~~~~v~~~~~~~v~~~  119 (159)
T PF00094_consen   77 -------GDQVTVNGQPVSLPYWS--------SGGSIERYS-GGFVVVVFSSGVRVQVN  119 (159)
T ss_pred             -------cceEEEeeecccCcccc--------CcceEEeec-cccEEEEEecCCeEEEE
Confidence                   78999999999984321        223555554 23344444444444433

Sequence analysis of this family revealed the presence of four distinct modules. Each module has homologues in other extracellular mosaic proteins such as Von Willebrand factor, slit, thrombospondins, fibrillar collagens, IGF-binding proteins and mucins. Classification and analysis of these modules suggests the location of binding regions and, by analogy to better characterised modules in other proteins, sheds some light onto the structure of this new family []. The vWF domain is found in various plasma proteins: complement factors B, C2, CR3 and CR4; the integrins (I-domains); collagen types VI, VII, XII and XIV; and other extracellular proteins [, , ]. Although the majority of VWA-containing proteins are extracellular, the most ancient ones present in all eukaryotes are all intracellular proteins involved in functions such as transcription, DNA repair, ribosomal and membrane transport and the proteasome. A common feature appears to be involvement in multiprotein complexes. Proteins that incorporate vWF domains participate in numerous biological events (e.g. cell adhesion, migration, homing, pattern formation, and signal transduction), involving interaction with a large array of ligands []. A number of human diseases arise from mutations in VWA domains. Secondary structure prediction from 75 aligned vWF sequences has revealed a largely alternating sequence of alpha-helices and beta-strands []. One of the functions of von Willebrand factor (vWF) is to serve as a carrier of clotting factor VIII (FVIII). The native conformation of the D' domain of vWF is not only required for factor VIII (FVIII) binding but also for normal multimerisation and optimal secretion. The interaction between blood clotting factor VIII and VWF is necessary for normal survival of blood clotting factor VIII in blood circulation. The VWFD domain is a highly structured region, in which the first conserved Cys has been found to form a disulphide bridge with the second conserved one [].

>cd01951 lectin_L-type legume lectins

Probab=87.59  E-value=8.5  Score=34.57  Aligned_cols=96  Identities=18%  Similarity=0.220  Sum_probs=57.4

Q ss_pred             eccCCceEEEecCCCCceeeecCCcceeeeEEeecCCCCCCCCceeEEeeeeeecceeEEEeeeecccCCCCCceEEEEE
Q 039782           95 IGGDGIVFYFHGKSNEHFSLVSDSELQINARFIGHRPAGRSRDFTWIQALGILFQSHSFSLEAAKAATWDNEIDHLKFSY  174 (340)
Q Consensus        95 iGGDG~~FYFHGkkd~~FcivSD~~LhINAHFIG~r~~g~~RDfTWiQalgi~F~~H~l~i~A~k~~~Wd~~vD~l~vt~  174 (340)
                      .||||..|-|+......-.. +..     .--.|.       ..- -+.|+|-||.|+=      ...||.+.+|+.|-+
T Consensus        70 ~~gdG~aF~l~~~~~~~~~~-~g~-----~~~lG~-------~~~-~~~~aVefDT~~N------~~~~dp~~~higi~~  129 (223)
T cd01951          70 NGADGIAFVLQNDPAGALGG-GGG-----GGGLGY-------GGI-GNSVAVEFDTYKN------DDNNDPNGNHISIDV  129 (223)
T ss_pred             CCCCcEEEEEecCCCCcccc-CCC-----CCccCc-------ccc-CCeEEEEEecccc------CCCCCCCCCEEEEEc
Confidence            58999999999765322111 000     001111       111 1578888887731      223788899999999


Q ss_pred             CCeEee-----------cCCCCC-ceeEeCCCCeEEEEEcCCCeEEEEeccc
Q 039782          175 NGQDLV-----------IPEGPL-SIWYSEEKDVKVERVSSKNSAIVSLKDT  214 (340)
Q Consensus       175 dGe~v~-----------ip~~~~-a~W~s~~~~l~V~Rt~~~N~V~V~l~g~  214 (340)
                      ||..-.           ++.... .+|.    .+.|+.....+.+.|+|.+.
T Consensus       130 n~~~~~~~~~~~~~~~~~~~~~~~g~~~----~v~I~Y~~~~~~L~v~l~~~  177 (223)
T cd01951         130 NGNGNNTALATSLGSASLPNGTGLGNEH----TVRITYDPTTNTLTVYLDNG  177 (223)
T ss_pred             CCCCCCcccccccceeeCCCccCCCCEE----EEEEEEeCCCCEEEEEECCC
Confidence            998532           111111 2233    48888888888999998775

The L-type (legume-type) lectins are a highly diverse family of carbohydrate binding proteins that generally display no enzymatic activity toward the sugars they bind. This family includes arcelin, concanavalinA, the lectin-like receptor kinases, the ERGIC-53/VIP36/EMP46 type1 transmembrane proteins, and an alpha-amylase inhibitor. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded sheet and homotetramers occur by a back-to-back association of these homodimers. Though L-type lectins exhibit both sequence and structural similarity to one another, their carbohydrate binding specificities differ widely.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	340
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-07

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 50.6 bits (120), Expect = 4e-07
 Identities = 65/415 (15%), Positives = 105/415 (25%), Gaps = 165/415 (39%)

Query: 38  CFDKEIECPFECP-------NTESDD----PKAKVCYV-------NCDHPTCKPQCKHRI 79
           C   +++C  +         N  S +       K+ Y          DH +      H I
Sbjct: 171 CLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSI 230

Query: 80  AN------CDSPGSAC-------YDPR----FIGG---------DGIVFYFHGKSNEHFS 113
                      P   C        + +    F              +  +    +  H S
Sbjct: 231 QAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHIS 290

Query: 114 LVSDSE-------LQINARFIGHRPAGRSRDFTWIQALGILFQSHSF--SLEAAK----A 160
           L   S          +  +++  RP    R     + L      +    S+ A       
Sbjct: 291 LDHHSMTLTPDEVKSLLLKYLDCRPQDLPR-----EVLTT----NPRRLSIIAESIRDGL 341

Query: 161 ATWDN----EIDHL----KFSYNG----------QDLV-------IPEGPLSI-WYSEEK 194
           ATWDN      D L    + S N             L        IP   LS+ W+   K
Sbjct: 342 ATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIK 401

Query: 195 DVKVERVSSK-----------NSAIVSLKDTAEILVNVVPVTKEDDRVHK-----YQVPA 238
              V  V +K             + +S+     I + +    + +  +H+     Y +P 
Sbjct: 402 SD-VMVVVNKLHKYSLVEKQPKESTISIPS---IYLELKVKLENEYALHRSIVDHYNIPK 457

Query: 239 ----DDCFA-------------HLE---------------VQFRFFNLSAKVDGVLGRTY 266
               DD                HL+               + FRF  L  K+        
Sbjct: 458 TFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRF--LEQKI-------- 507

Query: 267 RPDFENPAKPGVAMAVLGGEKEYKTESLFSTNCKTCIFATGSGADHQETTELMKF 321
           R D       G  +  L   K YK       N              +    ++ F
Sbjct: 508 RHDSTAWNASGSILNTLQQLKFYK--PYICDNDPK---------YERLVNAILDF 551

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	340
d2d3sa1	237	Legume lectin {Winged bean (Psophocarpus tetragono	84.46

>d2d3sa1 b.29.1.1 (A:1-237) Legume lectin {Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]

Probab=84.46  E-value=2.2  Score=36.04  Aligned_cols=94  Identities=20%  Similarity=0.210  Sum_probs=55.7

Q ss_pred             cCCeeeccCCceEEEecCCCCceeeecCCcceeeeE--EeecCCCCCCCCceeEEeeeeeecceeEEEeeeecccCCCCC
Q 039782           90 YDPRFIGGDGIVFYFHGKSNEHFSLVSDSELQINAR--FIGHRPAGRSRDFTWIQALGILFQSHSFSLEAAKAATWDNEI  167 (340)
Q Consensus        90 ~DPRFiGGDG~~FYFHGkkd~~FcivSD~~LhINAH--FIG~r~~g~~RDfTWiQalgi~F~~H~l~i~A~k~~~Wd~~v  167 (340)
                      ..|.-.||||..|-+...           +.-+++-  +.|.-+.+..     -++++|-||.++        ..||.+-
T Consensus        79 ~~~~~~g~dGlaFvl~p~-----------~~~~~~~gg~lG~~~~~~~-----~~~vaVEFDT~~--------n~~d~~~  134 (237)
T d2d3sa1          79 PFPRPHPADGLVFFIAPP-----------NTQTGEGGGYFGIYNPLSP-----YPFVAVEFDTFR--------NTWDPQI  134 (237)
T ss_dssp             SCCSSCCCEEEEEEEECS-----------SCCCCBCGGGTTTBCTTSC-----CCCEEEEEECSC--------CTTCCSS
T ss_pred             CCCCCCCCCeEEEEeCCC-----------CccCCccccccccccCCCc-----CceEEEEEEeec--------CCCCCCC
Confidence            344456899999988632           1112211  1222222211     257899999876        4689999


Q ss_pred             ceEEEEECCeEe----ecCCCCCceeEeCCCCeEEEEEcCCCeEEEEec
Q 039782          168 DHLKFSYNGQDL----VIPEGPLSIWYSEEKDVKVERVSSKNSAIVSLK  212 (340)
Q Consensus       168 D~l~vt~dGe~v----~ip~~~~a~W~s~~~~l~V~Rt~~~N~V~V~l~  212 (340)
                      +|+.|-+|+..-    .+.-..+ +|.    .+.|+..+.++.+.|+|.
T Consensus       135 nHvgI~vns~~s~~~~~~~l~~G-~~~----~v~I~Yd~~~~~L~V~l~  178 (237)
T d2d3sa1         135 PHIGIDVNSVISTKTVPFTLDNG-GIA----NVVIKYDASTKILHVVLV  178 (237)
T ss_dssp             SEEEEEESSSSCSEEEECCCCTT-CEE----EEEEEEETTTTEEEEEEE
T ss_pred             CcEEEEcCCCccccccceeecCC-CEE----EEEEEEECCCCEEEEEEE
Confidence            999999988421    1111111 222    377788888888888774