Citrus Sinensis ID: 039878


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------27
THSIRVGQESAKKAIGFIEAITLIAKEEGIKGYWKGNLPQVIRVLPYSAVQLFAYETYKKLFKGKDGELSVIGRLAAGACAGMTSTFVTYPLDVLRLRLAVEPGYQTMSQVALNMLREEGFSSFYHGLGPALIGIAPYIAVNFCIFDLVKKALPEKYRQKTQTSLLTAVVSAGVATLTCYPLDTIRRQMQMKGTPYKSVIDAFAGIVERDGVTGLYRGFVPNALKTLPNSSIRLTTFDIVKRIIAGSEKEFQRITEENRKKQNHNAKIE
ccccccccccccccccHHHHHHHHHHHccccEEEcccHHHHHHHccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcccccccHHHHHHHHHHHHcccccccccccccccEEEcccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHccccccccHHHHHHHHHHHHcHHHHcccccHHHHccccccEEHHHHHHHHHHHHccccHHHccccHHHHHccccccccc
ccEEEEEEccccccccHHHHHHHHHHHcccHHHHccccHHHHHHccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccccHHHHHHHHHHHcccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcccccccHHHHHHHHHHHcccHHEEcccHHHHHHHcHHHHHHHHHHHHHHHHHccccccccccHHHHHcccccccccc
THSIRVGQESAKKAIGFIEAITLIAKeegikgywkgnlpqviRVLPYSAVQLFAYETYKKLfkgkdgelsVIGRLAAgacagmtstfvtypLDVLRLRLAVEPGYQTMSQVALNMLREegfssfyhglgpaligiaPYIAVNFCIFDLVKKALPEKYRQKTQTSLLTAVVSAGVATLTCYPLDTIRrqmqmkgtpykSVIDAFAGIVerdgvtglyrgfvpnalktlpnssirlttFDIVKRIIAGSEKEFQRITEENRKKqnhnakie
thsirvgqesakkaigFIEAITLIAKEEGIKGYWKGNLPQVIRVLPYSAVQLFAYETYKKLFKGKDGELSVIGRLAAGACAGMTSTFVTYPLDVLRLRLAVEPGYQTMSQVALNMLREEGFSSFYHGLGPALIGIAPYIAVNFCIFDLVKKALPEKYRQKTQTSLLTAVVSAGVATLTCYPLDTIRRQMQMKGTPYKSVIDAFAGIVERDGVTGLYRGFVPnalktlpnssirlttfDIVKRIIAGsekefqriteenrkkqnhnakie
THSIRVGQESAKKAIGFIEAITLIAKEEGIKGYWKGNLPQVIRVLPYSAVQLFAYETYKKLFKGKDGELSVIGRLAAGACAGMTSTFVTYPLDVLRLRLAVEPGYQTMSQVALNMLREEGFSSFYHGLGPALIGIAPYIAVNFCIFDLVKKALPEKYRQKTQTSLLTAVVSAGVATLTCYPLDTIRRQMQMKGTPYKSVIDAFAGIVERDGVTGLYRGFVPNALKTLPNSSIRLTTFDIVKRIIAGSEKEFQRITEENRKKQNHNAKIE
************KAIGFIEAITLIAKEEGIKGYWKGNLPQVIRVLPYSAVQLFAYETYKKLFKGKDGELSVIGRLAAGACAGMTSTFVTYPLDVLRLRLAVEPGYQTMSQVALNMLREEGFSSFYHGLGPALIGIAPYIAVNFCIFDLVKKALPEKYRQKTQTSLLTAVVSAGVATLTCYPLDTIRRQMQMKGTPYKSVIDAFAGIVERDGVTGLYRGFVPNALKTLPNSSIRLTTFDIVKRIIAG***********************
****************FIEAITLIAKEEGIKGYWKGNLPQVIRVLPYSAVQLFAYETYKKLFKGKDGELSVIGRLAAGACAGMTSTFVTYPLDVLRLRLAVEPGYQTMSQVALNMLREEGFSSFYHGLGPALIGIAPYIAVNFCIFDLVKKALPEKYRQKTQTSLLTAVVSAGVATLTCYPLDTIRRQMQMKGTPYKSVIDAFAGIVERDGVTGLYRGFVPNALKTLPNSSIRLTTFDIVKRII*************************
*********SAKKAIGFIEAITLIAKEEGIKGYWKGNLPQVIRVLPYSAVQLFAYETYKKLFKGKDGELSVIGRLAAGACAGMTSTFVTYPLDVLRLRLAVEPGYQTMSQVALNMLREEGFSSFYHGLGPALIGIAPYIAVNFCIFDLVKKALPEKYRQKTQTSLLTAVVSAGVATLTCYPLDTIRRQMQMKGTPYKSVIDAFAGIVERDGVTGLYRGFVPNALKTLPNSSIRLTTFDIVKRIIAGSEKEFQRITE*************
THSIRVGQESAKKAIGFIEAITLIAKEEGIKGYWKGNLPQVIRVLPYSAVQLFAYETYKKLFKGKDGELSVIGRLAAGACAGMTSTFVTYPLDVLRLRLAVEPGYQTMSQVALNMLREEGFSSFYHGLGPALIGIAPYIAVNFCIFDLVKKALPEKYRQKTQTSLLTAVVSAGVATLTCYPLDTIRRQMQMKGTPYKSVIDAFAGIVERDGVTGLYRGFVPNALKTLPNSSIRLTTFDIVKRIIAGS**********************
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooo
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THSIRVGQESAKKAIGFIEAITLIAKEEGIKGYWKGNLPQVIRVLPYSAVQLFAYETYKKLFKGKDGELSVIGRLAAGACAGMTSTFVTYPLDVLRLRLAVEPGYQTMSQVALNMLREEGFSSFYHGLGPALIGIAPYIAVNFCIFDLVKKALPEKYRQKTQTSLLTAVVSAGVATLTCYPLDTIRRQMQMKGTPYKSVIDAFAGIVERDGVTGLYRGFVPNALKTLPNSSIRLTTFDIVKRIIAGSEKEFQRITEENRKKQNHNAKIE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query269 2.2.26 [Sep-21-2011]
O65023381 Probable envelope ADP,ATP yes no 0.899 0.635 0.813 1e-131
Q9M024415 Thylakoid ADP,ATP carrier no no 0.944 0.612 0.815 1e-128
Q54MZ4434 Mitochondrial substrate c yes no 0.884 0.548 0.349 1e-38
Q9SUV1392 Adenine nucleotide transp no no 0.862 0.591 0.337 3e-37
Q8BMD8475 Calcium-binding mitochond yes no 0.899 0.509 0.328 2e-36
Q05AQ3327 Mitochondrial coenzyme A no no 0.899 0.740 0.375 3e-36
Q5XHA0473 Calcium-binding mitochond no no 0.866 0.492 0.344 6e-35
Q7T0U6473 Calcium-binding mitochond N/A no 0.832 0.473 0.348 6e-35
O04619352 Mitochondrial adenine nuc no no 0.851 0.650 0.318 7e-35
Q5PQ27327 Mitochondrial coenzyme A N/A no 0.877 0.721 0.364 2e-34
>sp|O65023|EAAC_ARATH Probable envelope ADP,ATP carrier protein, chloroplastic OS=Arabidopsis thaliana GN=EAAC PE=2 SV=2 Back     alignment and function desciption
 Score =  467 bits (1202), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 214/263 (81%), Positives = 249/263 (94%)

Query: 1   THSIRVGQESAKKAIGFIEAITLIAKEEGIKGYWKGNLPQVIRVLPYSAVQLFAYETYKK 60
           TH IR+GQ+SAKKAIGFIEAITLIAKEEG+KGYWKGNLPQVIRVLPYSAVQL AYE+YK 
Sbjct: 117 THGIRLGQQSAKKAIGFIEAITLIAKEEGVKGYWKGNLPQVIRVLPYSAVQLLAYESYKN 176

Query: 61  LFKGKDGELSVIGRLAAGACAGMTSTFVTYPLDVLRLRLAVEPGYQTMSQVALNMLREEG 120
           LFKGKD +LSVIGRLAAGACAGMTST +TYPLDVLRLRLAVEPGY+TMSQVAL+MLR+EG
Sbjct: 177 LFKGKDDQLSVIGRLAAGACAGMTSTLLTYPLDVLRLRLAVEPGYRTMSQVALSMLRDEG 236

Query: 121 FSSFYHGLGPALIGIAPYIAVNFCIFDLVKKALPEKYRQKTQTSLLTAVVSAGVATLTCY 180
            +SFY+GLGP+L+GIAPYIAVNFCIFDLVKK+LPE+YR+K Q+SLLTAV+SAG+ATLTCY
Sbjct: 237 IASFYYGLGPSLVGIAPYIAVNFCIFDLVKKSLPEEYRKKAQSSLLTAVLSAGIATLTCY 296

Query: 181 PLDTIRRQMQMKGTPYKSVIDAFAGIVERDGVTGLYRGFVPNALKTLPNSSIRLTTFDIV 240
           PLDT+RRQMQM+GTPYKS+ +AFAGI++RDG+ GLYRGF+PNALKTLPNSSIRLTTFD+V
Sbjct: 297 PLDTVRRQMQMRGTPYKSIPEAFAGIIDRDGLIGLYRGFLPNALKTLPNSSIRLTTFDMV 356

Query: 241 KRIIAGSEKEFQRITEENRKKQN 263
           KR+IA SEK+ Q+I+++NR +  
Sbjct: 357 KRLIATSEKQLQKISDDNRNRDQ 379




Transports adenine nucleotides.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9M024|TAAC_ARATH Thylakoid ADP,ATP carrier protein, chloroplastic OS=Arabidopsis thaliana GN=TAAC PE=1 SV=1 Back     alignment and function description
>sp|Q54MZ4|MCFB_DICDI Mitochondrial substrate carrier family protein B OS=Dictyostelium discoideum GN=mcfB PE=3 SV=1 Back     alignment and function description
>sp|Q9SUV1|BRT1_ARATH Adenine nucleotide transporter BT1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=BT1 PE=1 SV=1 Back     alignment and function description
>sp|Q8BMD8|SCMC1_MOUSE Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Mus musculus GN=Slc25a24 PE=2 SV=1 Back     alignment and function description
>sp|Q05AQ3|S2542_XENTR Mitochondrial coenzyme A transporter SLC25A42 OS=Xenopus tropicalis GN=slc25a42 PE=2 SV=1 Back     alignment and function description
>sp|Q5XHA0|SCMC1_XENTR Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Xenopus tropicalis GN=slc25a24 PE=2 SV=1 Back     alignment and function description
>sp|Q7T0U6|SCM1B_XENLA Calcium-binding mitochondrial carrier protein SCaMC-1-B OS=Xenopus laevis GN=slc25a24-b PE=2 SV=1 Back     alignment and function description
>sp|O04619|ADNT1_ARATH Mitochondrial adenine nucleotide transporter ADNT1 OS=Arabidopsis thaliana GN=ADNT1 PE=2 SV=1 Back     alignment and function description
>sp|Q5PQ27|S2542_XENLA Mitochondrial coenzyme A transporter SLC25A42 OS=Xenopus laevis GN=slc25a42 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query269
224090992 393 predicted protein [Populus trichocarpa] 0.959 0.656 0.847 1e-136
224140413 390 predicted protein [Populus trichocarpa] 0.944 0.651 0.864 1e-135
255574375 392 ADP,ATP carrier protein, putative [Ricin 0.955 0.655 0.820 1e-132
225440684 381 PREDICTED: thylakoid ADP,ATP carrier pro 0.929 0.656 0.837 1e-131
297740211 389 unnamed protein product [Vitis vinifera] 0.929 0.642 0.837 1e-131
312283541 382 unnamed protein product [Thellungiella h 0.936 0.659 0.821 1e-130
312282157 382 unnamed protein product [Thellungiella h 0.936 0.659 0.817 1e-130
356503519 384 PREDICTED: probable envelope ADP,ATP car 0.925 0.648 0.828 1e-129
186510948 381 putative envelope ADP,ATP carrier protei 0.899 0.635 0.813 1e-129
3068714 381 unknown [Arabidopsis thaliana] 0.899 0.635 0.809 1e-128
>gi|224090992|ref|XP_002309137.1| predicted protein [Populus trichocarpa] gi|222855113|gb|EEE92660.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  489 bits (1258), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 228/269 (84%), Positives = 252/269 (93%)

Query: 1   THSIRVGQESAKKAIGFIEAITLIAKEEGIKGYWKGNLPQVIRVLPYSAVQLFAYETYKK 60
           TH +R GQESAKKAIGFIEAI +I KEEG+KGYWKGNLPQVIR++PYSAVQL AYETYKK
Sbjct: 123 THGVRAGQESAKKAIGFIEAIVMIGKEEGVKGYWKGNLPQVIRIIPYSAVQLLAYETYKK 182

Query: 61  LFKGKDGELSVIGRLAAGACAGMTSTFVTYPLDVLRLRLAVEPGYQTMSQVALNMLREEG 120
           LFKGKDGELSVIGRLAAGACAGMTSTFVTYPLDVLRLRLAV+PGY+TMS++AL MLREEG
Sbjct: 183 LFKGKDGELSVIGRLAAGACAGMTSTFVTYPLDVLRLRLAVDPGYRTMSEIALTMLREEG 242

Query: 121 FSSFYHGLGPALIGIAPYIAVNFCIFDLVKKALPEKYRQKTQTSLLTAVVSAGVATLTCY 180
            +SFY+GLGP+L+GIAPYIAVNFCIFDLVKK+LPEKY+QKTQ++LLTAVVSA VATLTCY
Sbjct: 243 VASFYYGLGPSLLGIAPYIAVNFCIFDLVKKSLPEKYQQKTQSTLLTAVVSAAVATLTCY 302

Query: 181 PLDTIRRQMQMKGTPYKSVIDAFAGIVERDGVTGLYRGFVPNALKTLPNSSIRLTTFDIV 240
           PLDT+RRQMQMKGTPYKSV+DAF GIV+RDGV GLYRGF+PNALK LPNSSIRLTTFDIV
Sbjct: 303 PLDTVRRQMQMKGTPYKSVLDAFPGIVQRDGVIGLYRGFLPNALKNLPNSSIRLTTFDIV 362

Query: 241 KRIIAGSEKEFQRITEENRKKQNHNAKIE 269
           KR+IA SEKEFQRI EENR KQ+ +A  E
Sbjct: 363 KRLIAASEKEFQRIVEENRHKQSQDASNE 391




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224140413|ref|XP_002323577.1| predicted protein [Populus trichocarpa] gi|222868207|gb|EEF05338.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255574375|ref|XP_002528101.1| ADP,ATP carrier protein, putative [Ricinus communis] gi|223532490|gb|EEF34280.1| ADP,ATP carrier protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225440684|ref|XP_002274764.1| PREDICTED: thylakoid ADP,ATP carrier protein, chloroplastic [Vitis vinifera] Back     alignment and taxonomy information
>gi|297740211|emb|CBI30393.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|312283541|dbj|BAJ34636.1| unnamed protein product [Thellungiella halophila] Back     alignment and taxonomy information
>gi|312282157|dbj|BAJ33944.1| unnamed protein product [Thellungiella halophila] Back     alignment and taxonomy information
>gi|356503519|ref|XP_003520555.1| PREDICTED: probable envelope ADP,ATP carrier protein, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|186510948|ref|NP_190755.2| putative envelope ADP,ATP carrier protein [Arabidopsis thaliana] gi|332278178|sp|O65023.2|EAAC_ARATH RecName: Full=Probable envelope ADP,ATP carrier protein, chloroplastic; AltName: Full=Envelope ADP/ATP translocase; Flags: Precursor gi|110738620|dbj|BAF01235.1| hypothetical protein [Arabidopsis thaliana] gi|332645333|gb|AEE78854.1| putative envelope ADP,ATP carrier protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|3068714|gb|AAC14414.1| unknown [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query269
TAIR|locus:2149725415 TAAC "AT5G01500" [Arabidopsis 0.985 0.638 0.815 5.4e-118
TAIR|locus:2074358381 AT3G51870 "AT3G51870" [Arabido 0.970 0.685 0.819 2.7e-116
DICTYBASE|DDB_G0285599434 mcfB "calcium-dependent mitoch 0.899 0.557 0.375 4.3e-38
TAIR|locus:2127851392 SHS1 "AT4G32400" [Arabidopsis 0.862 0.591 0.353 2.1e-36
UNIPROTKB|Q05AQ3327 slc25a42 "Mitochondrial coenzy 0.899 0.740 0.375 9.2e-36
MGI|MGI:1917160475 Slc25a24 "solute carrier famil 0.895 0.507 0.338 9.2e-36
UNIPROTKB|E1BW83475 SLC25A24 "Uncharacterized prot 0.869 0.492 0.331 4e-35
RGD|1311982475 Slc25a24 "solute carrier famil 0.895 0.507 0.334 8.3e-35
UNIPROTKB|Q5PQ27327 slc25a42 "Mitochondrial coenzy 0.877 0.721 0.364 4.6e-34
UNIPROTKB|F6Q4L6416 SLC25A24 "Uncharacterized prot 0.884 0.572 0.326 9.5e-34
TAIR|locus:2149725 TAAC "AT5G01500" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1162 (414.1 bits), Expect = 5.4e-118, P = 5.4e-118
 Identities = 216/265 (81%), Positives = 249/265 (93%)

Query:     1 THSIRVGQESAKKAIGFIEAITLIAKEEGIKGYWKGNLPQVIRVLPYSAVQLFAYETYKK 60
             TH +R GQ+SAKKAIGFIEAITLI KEEGIKGYWKGNLPQVIR++PYSAVQLFAYETYKK
Sbjct:   145 THGVRAGQQSAKKAIGFIEAITLIGKEEGIKGYWKGNLPQVIRIVPYSAVQLFAYETYKK 204

Query:    61 LFKGKDGELSVIGRLAAGACAGMTSTFVTYPLDVLRLRLAVEPGYQTMSQVALNMLREEG 120
             LF+GKDG+LSV+GRL AGACAGMTST +TYPLDVLRLRLAVEPGY+TMSQVALNMLREEG
Sbjct:   205 LFRGKDGQLSVLGRLGAGACAGMTSTLITYPLDVLRLRLAVEPGYRTMSQVALNMLREEG 264

Query:   121 FSSFYHGLGPALIGIAPYIAVNFCIFDLVKKALPEKYRQKTQTSLLTAVVSAGVATLTCY 180
              +SFY+GLGP+L+ IAPYIA+NFC+FDLVKK+LPEKY+QKTQ+SLLTAVV+A +AT TCY
Sbjct:   265 VASFYNGLGPSLLSIAPYIAINFCVFDLVKKSLPEKYQQKTQSSLLTAVVAAAIATGTCY 324

Query:   181 PLDTIRRQMQMKGTPYKSVIDAFAGIVERDGVTGLYRGFVPNALKTLPNSSIRLTTFDIV 240
             PLDTIRRQMQ+KGTPYKSV+DAF+GI+ R+GV GLYRGFVPNALK++PNSSI+LTTFDIV
Sbjct:   325 PLDTIRRQMQLKGTPYKSVLDAFSGIIAREGVVGLYRGFVPNALKSMPNSSIKLTTFDIV 384

Query:   241 KRIIAGSEKEFQRITEENRKKQNHN 265
             K++IA SEKE QRI ++NRKK + N
Sbjct:   385 KKLIAASEKEIQRIADDNRKKASPN 409


GO:0005215 "transporter activity" evidence=ISS
GO:0005739 "mitochondrion" evidence=ISM;IDA
GO:0005743 "mitochondrial inner membrane" evidence=ISS
GO:0006810 "transport" evidence=IEA;ISS
GO:0055085 "transmembrane transport" evidence=IEA
GO:0009941 "chloroplast envelope" evidence=IDA
GO:0009536 "plastid" evidence=IDA
GO:0005347 "ATP transmembrane transporter activity" evidence=IDA
GO:0009526 "plastid envelope" evidence=IDA
GO:0042651 "thylakoid membrane" evidence=IDA
GO:0009507 "chloroplast" evidence=IDA
GO:0010117 "photoprotection" evidence=IMP
GO:0010206 "photosystem II repair" evidence=IMP
TAIR|locus:2074358 AT3G51870 "AT3G51870" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0285599 mcfB "calcium-dependent mitochondrial substrate carrier" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
TAIR|locus:2127851 SHS1 "AT4G32400" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q05AQ3 slc25a42 "Mitochondrial coenzyme A transporter SLC25A42" [Xenopus (Silurana) tropicalis (taxid:8364)] Back     alignment and assigned GO terms
MGI|MGI:1917160 Slc25a24 "solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E1BW83 SLC25A24 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
RGD|1311982 Slc25a24 "solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q5PQ27 slc25a42 "Mitochondrial coenzyme A transporter SLC25A42" [Xenopus laevis (taxid:8355)] Back     alignment and assigned GO terms
UNIPROTKB|F6Q4L6 SLC25A24 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O65023EAAC_ARATHNo assigned EC number0.81360.89960.6351yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
fgenesh4_pm.C_LG_VI000346
hypothetical protein (393 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query269
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 5e-28
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 6e-23
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 4e-20
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 7e-14
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 2e-08
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 9e-06
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 1e-05
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
 Score =  108 bits (272), Expect = 5e-28
 Identities = 62/234 (26%), Positives = 103/234 (44%), Gaps = 30/234 (12%)

Query: 16  GFIEAITLIAKEEGIKGYWKGNLPQVIRVLPYSAVQLFAYETYKKLF----KGKDGELSV 71
           G +     ++KE+G+   W+GN   VIR  P  A      + +K +F    +  D     
Sbjct: 54  GIVNCFRRVSKEQGVLSLWRGNTANVIRYFPTQAFNFAFKDYFKNMFPKYNQKTDFWKFF 113

Query: 72  IGRLAAGACAGMTSTFVTYPLDVLRLRLAVEPG------YQTMSQVALNMLREEGFSSFY 125
              + +G  AG +S  + YPLD  R RLA + G      +  +    + + ++ GF S Y
Sbjct: 114 GVNILSGGLAGASSLLIVYPLDFARTRLASDIGKGGDREFTGLFDCLMKISKQTGFLSLY 173

Query: 126 HGLGPALIGIAPYIAVNFCIFDLVKKALPEKYRQKTQTSLL-------TAVVSAGVATLT 178
            G G ++ GI  Y    F ++D  K  L   +     T++L       T  + AG+    
Sbjct: 174 QGFGVSVQGIIVYRGAYFGLYDSAKALL---FGNDKNTNILYKWAVAQTVTILAGLI--- 227

Query: 179 CYPLDTIRRQMQM-------KGTPYKSVIDAFAGIVERDGVTGLYRGFVPNALK 225
            YP DT+RR+M M           Y   +D +  I++ +G+ G ++G   N L+
Sbjct: 228 SYPFDTVRRRMMMMSGRKAKSEIQYTGTLDCWKKILKNEGLGGFFKGAWANVLR 281


Length = 300

>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 269
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0765333 consensus Predicted mitochondrial carrier protein 100.0
KOG0770353 consensus Predicted mitochondrial carrier protein 100.0
KOG0766297 consensus Predicted mitochondrial carrier protein 100.0
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 100.0
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 100.0
KOG0750304 consensus Mitochondrial solute carrier protein [En 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 100.0
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 100.0
KOG0767333 consensus Mitochondrial phosphate carrier protein 100.0
KOG0769308 consensus Predicted mitochondrial carrier protein 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 99.98
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 99.97
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 99.97
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 99.97
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 99.97
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 99.96
KOG0770 353 consensus Predicted mitochondrial carrier protein 99.96
KOG0751 694 consensus Mitochondrial aspartate/glutamate carrie 99.95
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 99.94
KOG0769308 consensus Predicted mitochondrial carrier protein 99.93
KOG0767333 consensus Mitochondrial phosphate carrier protein 99.93
KOG0765333 consensus Predicted mitochondrial carrier protein 99.93
KOG0766297 consensus Predicted mitochondrial carrier protein 99.93
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.93
KOG0036463 consensus Predicted mitochondrial carrier protein 99.91
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.89
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.88
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.88
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.86
KOG1519297 consensus Predicted mitochondrial carrier protein 99.86
KOG2745321 consensus Mitochondrial carrier protein [General f 99.77
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.75
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.69
KOG2745321 consensus Mitochondrial carrier protein [General f 99.69
KOG2954427 consensus Mitochondrial carrier protein [General f 99.58
KOG1519297 consensus Predicted mitochondrial carrier protein 99.32
KOG2954427 consensus Mitochondrial carrier protein [General f 98.62
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
Probab=100.00  E-value=3.2e-53  Score=338.28  Aligned_cols=247  Identities=26%  Similarity=0.457  Sum_probs=223.9

Q ss_pred             cccccccc-----cccccCcHHHHHHHHHHhhCccccccCchHHHHHHhhhhhhHHhhhHHHHHhhcCCCCC--CchHHH
Q 039878            2 HSIRVGQE-----SAKKAIGFIEAITLIAKEEGIKGYWKGNLPQVIRVLPYSAVQLFAYETYKKLFKGKDGE--LSVIGR   74 (269)
Q Consensus         2 ~~~r~~~~-----~~~~~~~~~~~~~~i~~~eGi~glyrG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~   74 (269)
                      .|||.|.+     ..+.|.|++++++.|++.||++|||||+.|.++++.+++.++|.+|+.+++++.+..+.  .++..+
T Consensus        29 ~K~R~qa~~g~~~~~~~y~g~~~~~~tI~r~eG~rGLY~Gl~P~v~G~~~sWgiYF~~Y~~~K~~~~~~~~~~~l~~~~~  108 (299)
T KOG0764|consen   29 VKIRFQASDGRTSLRPAYKGIFGALKTIFRSEGLRGLYRGLSPNVLGSAPSWGLYFFFYDFLKSFITEGFNSGLLSVLAN  108 (299)
T ss_pred             hhhhhhhccCccccchhhccHHHHHHHHHHhhhHHHHhccCcHHHHhchhhHHHHHHHHHHHHHHHhcCCCcccchHHHH
Confidence            37888887     57899999999999999999999999999999999999999999999999998765444  488999


Q ss_pred             HHHHHHHHHHHHhhhccHHHHHHHHhcCC------CCCCHHHHHHHHHHhhCccccccchhhhhhhhhhhhhHHHHHHHH
Q 039878           75 LAAGACAGMTSTFVTYPLDVLRLRLAVEP------GYQTMSQVALNMLREEGFSSFYHGLGPALIGIAPYIAVNFCIFDL  148 (269)
Q Consensus        75 ~~~g~~a~~~~~~i~~Ple~ik~r~q~~~------~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~~~~~~y~~  148 (269)
                      +.+++.||+++.++++|+.++|+|++.+.      .|+++++++++|+++||++|||+|+.|.++. +...+++|..||.
T Consensus       109 l~sa~~AGa~t~~lTNPIWVvKTRL~~Q~~~~~~~~Y~~~f~a~rki~k~EG~rgLY~GlVP~L~G-vshgAiQF~~YE~  187 (299)
T KOG0764|consen  109 LSSAAEAGAATTILTNPIWVVKTRLMLQSKNVQSTAYKGMFDALRKIYKEEGFRGLYKGLVPGLLG-VSHGAIQFPAYEE  187 (299)
T ss_pred             HHHHHhhhHHHHHhcCCeEEEeehhhhhcccccccccccHHHHHHHHHHHHhHHHHHhhhhhHhhh-hchhhhhhhhHHH
Confidence            99999999999999999999999998874      5899999999999999999999999999995 5588999999999


Q ss_pred             HHHhchhhhhhh------hhhhHHHHHHHHHHhhhhhChHHHHHHHHhhC--CCCCCCHHHHHHHHHHhhCccccccchH
Q 039878          149 VKKALPEKYRQK------TQTSLLTAVVSAGVATLTCYPLDTIRRQMQMK--GTPYKSVIDAFAGIVERDGVTGLYRGFV  220 (269)
Q Consensus       149 ~~~~~~~~~~~~------~~~~~~~~~~a~~~~~~~~~P~d~v~~r~q~~--~~~~~~~~~~~~~i~~~~G~~~ly~G~~  220 (269)
                      +|..+.+..+.+      +...+..+.++-++++.++||++|+|+|||.+  .+.|.+++++++++|++||+.|||+|+.
T Consensus       188 lK~~~~~~~~~~~d~~l~n~~~i~~as~SKv~Ast~TYP~qVlRtRLQ~~~~~~~~~~~~~lIk~t~r~eG~~GfYkG~~  267 (299)
T KOG0764|consen  188 LKLRKNRKQGRSTDNHLSNLDYIALASLSKVFASTLTYPHQVLRTRLQDQSDNPRYRGVFDLIKKTWRNEGFRGFYKGLA  267 (299)
T ss_pred             HHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhcchHHHHHHHHHhcccCcccccHHHHHHHHHHHhchhhHHHHhH
Confidence            999885443332      23556666699999999999999999999998  6789999999999999999999999999


Q ss_pred             HHHhhhhhhhHHHHHHHHHHHHHHccchh
Q 039878          221 PNALKTLPNSSIRLTTFDIVKRIIAGSEK  249 (269)
Q Consensus       221 ~~~~~~~~~~~i~~~iye~~~~~~~~~~~  249 (269)
                      ++++|..|.+.++|.+||.+++++....+
T Consensus       268 ~nLvR~vPA~~ITF~vyEnv~~~L~~~~~  296 (299)
T KOG0764|consen  268 TNLVRTVPAACITFLVYENVKHFLVTHRT  296 (299)
T ss_pred             HHHhhccccceeeeehHHHHHHHHhcccc
Confidence            99999999999999999999998876654



>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query269
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 3e-27
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 1e-14
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 2e-11
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Iteration: 1

Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 78/256 (30%), Positives = 117/256 (45%), Gaps = 20/256 (7%) Query: 8 QESAKKAI-GFIEAITLIAKEEGIKGYWKGNLPQVIRVLPYSAVQLFAYETYKKLFKG-- 64 Q SA+K G I+ + I KE+G +W+GNL VIR P A+ + YK++F G Sbjct: 43 QISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGV 102 Query: 65 ---KDGELSVIGRLAAGACAGMTSTFVTYPLDVLRLRLAVEPG-------YQTMSQVALN 114 K G LA+G AG TS YPLD R RLA + G + + Sbjct: 103 DRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITK 162 Query: 115 MLREEGFSSFYHGLGPALIGIAPYIAVNFCIFDLVKKALPEKYRQKTQTSLLTAVVSAGV 174 + + +G Y G ++ GI Y A F ++D K LP+ S + A V Sbjct: 163 IFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAV 222 Query: 175 ATLTCYPLDTIRRQMQM----KGTP--YKSVIDAFAGIVERDGVTGLYRGFVPNALKTLP 228 A L YP DT+RR+M M KG Y +D + I + +G ++G N L+ + Sbjct: 223 AGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG 282 Query: 229 NSSIRLTTFDIVKRII 244 + + L +D +K+ + Sbjct: 283 GAFV-LVLYDEIKKFV 297
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query269
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 3e-92
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-39
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 5e-11
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 2e-50
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 2e-36
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 7e-27
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 2e-13
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
 Score =  273 bits (700), Expect = 3e-92
 Identities = 72/262 (27%), Positives = 112/262 (42%), Gaps = 19/262 (7%)

Query: 1   THSIRVGQESAKKAIGFIEAITLIAKEEGIKGYWKGNLPQVIRVLPYSAVQLFAYETYKK 60
                    + K+  G I+ +  I KE+G   +W+GNL  VIR  P  A+     + YK+
Sbjct: 37  VQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQ 96

Query: 61  LFKGKDG-----ELSVIGRLAAGACAGMTSTFVTYPLDVLRLRLAVEPG-------YQTM 108
           +F G             G LA+G  AG TS    YPLD  R RLA + G       +  +
Sbjct: 97  IFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGL 156

Query: 109 SQVALNMLREEGFSSFYHGLGPALIGIAPYIAVNFCIFDLVKKALPEKYRQKTQTSLLTA 168
                 + + +G    Y G   ++ GI  Y A  F ++D  K  LP+        S + A
Sbjct: 157 GNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIA 216

Query: 169 VVSAGVATLTCYPLDTIRRQMQMKG------TPYKSVIDAFAGIVERDGVTGLYRGFVPN 222
                VA L  YP DT+RR+M M+         Y   +D +  I + +G    ++G   N
Sbjct: 217 QTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSN 276

Query: 223 ALKTLPNSSIRLTTFDIVKRII 244
            L+ +   +  L  +D +K+ +
Sbjct: 277 VLRGMG-GAFVLVLYDEIKKFV 297


>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query269
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=100.00  E-value=2.9e-52  Score=355.96  Aligned_cols=252  Identities=19%  Similarity=0.373  Sum_probs=228.2

Q ss_pred             cccccccccc----------cccCcHHHHHHHHHHhhCccccccCchHHHHHHhhhhhhHHhhhHHHHHhhcCCCCCCch
Q 039878            2 HSIRVGQESA----------KKAIGFIEAITLIAKEEGIKGYWKGNLPQVIRVLPYSAVQLFAYETYKKLFKGKDGELSV   71 (269)
Q Consensus         2 ~~~r~~~~~~----------~~~~~~~~~~~~i~~~eGi~glyrG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (269)
                      .|+|+|.+..          ..|.++++++++|+++||++|||||+.|++++.++..+++|.+|+.+++.+.+.....+.
T Consensus        25 iKtrlQ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~~~~~~~~~~~  104 (303)
T 2lck_A           25 AKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSEHAGI  104 (303)
T ss_dssp             HHHHSSCCTTCCSHHHHCSCSSCSCHHHHHHHHHHHHCHHHHHSSHHHHHHHHHHHHHHTTTHHHHHHHHHSCCCSSCCH
T ss_pred             HHHHHHhhhccccccccccCCCCCCHHHHHHHHHHhhCHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcH
Confidence            5888888743          368999999999999999999999999999999999999999999999988765335678


Q ss_pred             HHHHHHHHHHHHHHHhhhccHHHHHHHHhcCC------CCCCHHHHHHHHHHhhCccccccchhhhhhhhhhhhhHHHHH
Q 039878           72 IGRLAAGACAGMTSTFVTYPLDVLRLRLAVEP------GYQTMSQVALNMLREEGFSSFYHGLGPALIGIAPYIAVNFCI  145 (269)
Q Consensus        72 ~~~~~~g~~a~~~~~~i~~Ple~ik~r~q~~~------~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~~~~~~  145 (269)
                      ...+++|++||+++.++++|+|++|+|+|++.      .|.+.++++++|++++|++|||+|+.+++++++++.+++|.+
T Consensus       105 ~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~f~~  184 (303)
T 2lck_A          105 GSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVT  184 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSCCCSSSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCcHHHHHHHHhcccccCCCCCCCCHHHHHHHHHHhcChhhhhCCccHHHHHHHHHHHHHHHH
Confidence            88999999999999999999999999999975      588999999999999999999999999999999999999999


Q ss_pred             HHHHHHhchhhh--hhhhhhhHHHHHHHHHHhhhhhChHHHHHHHHhhCCC-CCCCHHHHHHHHHHhhCccccccchHHH
Q 039878          146 FDLVKKALPEKY--RQKTQTSLLTAVVSAGVATLTCYPLDTIRRQMQMKGT-PYKSVIDAFAGIVERDGVTGLYRGFVPN  222 (269)
Q Consensus       146 y~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~~~~~P~d~v~~r~q~~~~-~~~~~~~~~~~i~~~~G~~~ly~G~~~~  222 (269)
                      ||.+++.+.+..  ..+....+++|++||++++++++|+|+||+|+|.+.. .|+++++|+++++++||++|||||+.++
T Consensus       185 ye~~k~~l~~~~~~~~~~~~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~~~~y~~~~~~~~~i~~~eG~~glyrG~~~~  264 (303)
T 2lck_A          185 YDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQYHSAGHCALTMLRKEGPRAFYKGFMPS  264 (303)
T ss_dssp             HHHHHHTTTTTTSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSSCCSHHHHHHHHHHSSCTHHHHSCCHHH
T ss_pred             HHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhccccccCCHHHHHHHHHHHcChHHhhccHHHH
Confidence            999999886543  2344567899999999999999999999999999854 6999999999999999999999999999


Q ss_pred             HhhhhhhhHHHHHHHHHHHHHHccchhhhhh
Q 039878          223 ALKTLPNSSIRLTTFDIVKRIIAGSEKEFQR  253 (269)
Q Consensus       223 ~~~~~~~~~i~~~iye~~~~~~~~~~~~~~~  253 (269)
                      ++|.+|.++++|.+||.+++.+.+..+...+
T Consensus       265 ~~r~~p~~~i~f~~ye~~k~~l~~~~~~~~~  295 (303)
T 2lck_A          265 FLRLGSWNVVMFVTYEQLKRALMAAYQSREA  295 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSCCCCHHHHHHC
T ss_pred             HHHHHhHHHHHHHHHHHHHHHHHHhccCCCC
Confidence            9999999999999999999988765554433



>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 269
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 1e-25
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 2e-13
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score =  100 bits (248), Expect = 1e-25
 Identities = 71/247 (28%), Positives = 108/247 (43%), Gaps = 19/247 (7%)

Query: 10  SAKKAIGFIEAITLIAKEEGIKGYWKGNLPQVIRVLPYSAVQLFAYETYKKLFKG----- 64
           + K+  G I+ +  I KE+G   +W+GNL  VIR  P  A+     + YK++F G     
Sbjct: 45  AEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRH 104

Query: 65  KDGELSVIGRLAAGACAGMTSTFVTYPLDVLRLRLAVE-------PGYQTMSQVALNMLR 117
           K       G LA+G  AG TS    YPLD  R RLA +         +  +      + +
Sbjct: 105 KQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFK 164

Query: 118 EEGFSSFYHGLGPALIGIAPYIAVNFCIFDLVKKALPEKYRQKTQTSLLTAVVSAGVATL 177
            +G    Y G   ++ GI  Y A  F ++D  K  LP+        S + A     VA L
Sbjct: 165 SDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGL 224

Query: 178 TCYPLDTIRRQMQM------KGTPYKSVIDAFAGIVERDGVTGLYRGFVPNALKTLPNSS 231
             YP DT+RR+M M          Y   +D +  I + +G    ++G   N L+ +  + 
Sbjct: 225 VSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAF 284

Query: 232 IRLTTFD 238
           + L  +D
Sbjct: 285 V-LVLYD 290


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query269
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.97
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=1.3e-44  Score=304.86  Aligned_cols=239  Identities=29%  Similarity=0.549  Sum_probs=215.2

Q ss_pred             Cccccccccc-------ccccCcHHHHHHHHHHhhCccccccCchHHHHHHhhhhhhHHhhhHHHHHhhcCCCCC-----
Q 039878            1 THSIRVGQES-------AKKAIGFIEAITLIAKEEGIKGYWKGNLPQVIRVLPYSAVQLFAYETYKKLFKGKDGE-----   68 (269)
Q Consensus         1 ~~~~r~~~~~-------~~~~~~~~~~~~~i~~~eGi~glyrG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----   68 (269)
                      |.|+|+|.|.       ...|+|+++++++++++||+++||||+.+.++...+...++|.+|+.++..+......     
T Consensus        29 ~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (292)
T d1okca_          29 RVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFW  108 (292)
T ss_dssp             HHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTCHH
T ss_pred             HHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhcccchhHHHHHHHHHHHhcccccccccc
Confidence            4688988864       3467899999999999999999999999999999999999999999999888654332     


Q ss_pred             CchHHHHHHHHHHHHHHHhhhccHHHHHHHHhcCC-------CCCCHHHHHHHHHHhhCccccccchhhhhhhhhhhhhH
Q 039878           69 LSVIGRLAAGACAGMTSTFVTYPLDVLRLRLAVEP-------GYQTMSQVALNMLREEGFSSFYHGLGPALIGIAPYIAV  141 (269)
Q Consensus        69 ~~~~~~~~~g~~a~~~~~~i~~Ple~ik~r~q~~~-------~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~~  141 (269)
                      .....++++|.+|++++.++++|+|++|+|+|.+.       .+.+..+.++++++++|+++||+|+.+++++++++.++
T Consensus       109 ~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~l~~G~~~~~~~~~~~~~~  188 (292)
T d1okca_         109 RYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAA  188 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHH
T ss_pred             hhhhhhhhhhhhhhhhHHhhhhhhhhhheeeeccccccccccccccHHHHHHHhhhccchhhhhccccccccceehHhhh
Confidence            23456788999999999999999999999999863       46789999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhchhhhhhhhhhhHHHHHHHHHHhhhhhChHHHHHHHHhhCCC------CCCCHHHHHHHHHHhhCcccc
Q 039878          142 NFCIFDLVKKALPEKYRQKTQTSLLTAVVSAGVATLTCYPLDTIRRQMQMKGT------PYKSVIDAFAGIVERDGVTGL  215 (269)
Q Consensus       142 ~~~~y~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~d~v~~r~q~~~~------~~~~~~~~~~~i~~~~G~~~l  215 (269)
                      +|..||.+++.+.+.........++++.+++++++++++|+||||+|+|.+..      .|.++++|+++++++||+++|
T Consensus       189 ~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~a~~~t~P~dvvktR~q~~~~~~~~~~~y~~~~~~~~~i~~~eG~~~l  268 (292)
T d1okca_         189 YFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAF  268 (292)
T ss_dssp             HHHHHHHHHHSSCGGGCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCGGGCSCSSHHHHHHHHHHHHCGGGG
T ss_pred             hhhhccchhhhcccccccchHHHHHHHHHHHHHHhhccccHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhcCcCcc
Confidence            99999999999988877778888999999999999999999999999998753      588999999999999999999


Q ss_pred             ccchHHHHhhhhhhhHHHHHHHHHH
Q 039878          216 YRGFVPNALKTLPNSSIRLTTFDIV  240 (269)
Q Consensus       216 y~G~~~~~~~~~~~~~i~~~iye~~  240 (269)
                      |||+.++++|.++ +++.|.+||.+
T Consensus       269 yrG~~~~~~r~i~-~~i~~~~ye~l  292 (292)
T d1okca_         269 FKGAWSNVLRGMG-GAFVLVLYDEI  292 (292)
T ss_dssp             GTTHHHHHHHHHH-HHHHHHHHHTC
T ss_pred             cccHHHHHHHHHH-HHhhhhHhhcC
Confidence            9999999999755 68999999963



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure