Citrus Sinensis ID: 039878
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 269 | ||||||
| 224090992 | 393 | predicted protein [Populus trichocarpa] | 0.959 | 0.656 | 0.847 | 1e-136 | |
| 224140413 | 390 | predicted protein [Populus trichocarpa] | 0.944 | 0.651 | 0.864 | 1e-135 | |
| 255574375 | 392 | ADP,ATP carrier protein, putative [Ricin | 0.955 | 0.655 | 0.820 | 1e-132 | |
| 225440684 | 381 | PREDICTED: thylakoid ADP,ATP carrier pro | 0.929 | 0.656 | 0.837 | 1e-131 | |
| 297740211 | 389 | unnamed protein product [Vitis vinifera] | 0.929 | 0.642 | 0.837 | 1e-131 | |
| 312283541 | 382 | unnamed protein product [Thellungiella h | 0.936 | 0.659 | 0.821 | 1e-130 | |
| 312282157 | 382 | unnamed protein product [Thellungiella h | 0.936 | 0.659 | 0.817 | 1e-130 | |
| 356503519 | 384 | PREDICTED: probable envelope ADP,ATP car | 0.925 | 0.648 | 0.828 | 1e-129 | |
| 186510948 | 381 | putative envelope ADP,ATP carrier protei | 0.899 | 0.635 | 0.813 | 1e-129 | |
| 3068714 | 381 | unknown [Arabidopsis thaliana] | 0.899 | 0.635 | 0.809 | 1e-128 |
| >gi|224090992|ref|XP_002309137.1| predicted protein [Populus trichocarpa] gi|222855113|gb|EEE92660.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 489 bits (1258), Expect = e-136, Method: Compositional matrix adjust.
Identities = 228/269 (84%), Positives = 252/269 (93%)
Query: 1 THSIRVGQESAKKAIGFIEAITLIAKEEGIKGYWKGNLPQVIRVLPYSAVQLFAYETYKK 60
TH +R GQESAKKAIGFIEAI +I KEEG+KGYWKGNLPQVIR++PYSAVQL AYETYKK
Sbjct: 123 THGVRAGQESAKKAIGFIEAIVMIGKEEGVKGYWKGNLPQVIRIIPYSAVQLLAYETYKK 182
Query: 61 LFKGKDGELSVIGRLAAGACAGMTSTFVTYPLDVLRLRLAVEPGYQTMSQVALNMLREEG 120
LFKGKDGELSVIGRLAAGACAGMTSTFVTYPLDVLRLRLAV+PGY+TMS++AL MLREEG
Sbjct: 183 LFKGKDGELSVIGRLAAGACAGMTSTFVTYPLDVLRLRLAVDPGYRTMSEIALTMLREEG 242
Query: 121 FSSFYHGLGPALIGIAPYIAVNFCIFDLVKKALPEKYRQKTQTSLLTAVVSAGVATLTCY 180
+SFY+GLGP+L+GIAPYIAVNFCIFDLVKK+LPEKY+QKTQ++LLTAVVSA VATLTCY
Sbjct: 243 VASFYYGLGPSLLGIAPYIAVNFCIFDLVKKSLPEKYQQKTQSTLLTAVVSAAVATLTCY 302
Query: 181 PLDTIRRQMQMKGTPYKSVIDAFAGIVERDGVTGLYRGFVPNALKTLPNSSIRLTTFDIV 240
PLDT+RRQMQMKGTPYKSV+DAF GIV+RDGV GLYRGF+PNALK LPNSSIRLTTFDIV
Sbjct: 303 PLDTVRRQMQMKGTPYKSVLDAFPGIVQRDGVIGLYRGFLPNALKNLPNSSIRLTTFDIV 362
Query: 241 KRIIAGSEKEFQRITEENRKKQNHNAKIE 269
KR+IA SEKEFQRI EENR KQ+ +A E
Sbjct: 363 KRLIAASEKEFQRIVEENRHKQSQDASNE 391
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224140413|ref|XP_002323577.1| predicted protein [Populus trichocarpa] gi|222868207|gb|EEF05338.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|255574375|ref|XP_002528101.1| ADP,ATP carrier protein, putative [Ricinus communis] gi|223532490|gb|EEF34280.1| ADP,ATP carrier protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|225440684|ref|XP_002274764.1| PREDICTED: thylakoid ADP,ATP carrier protein, chloroplastic [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|297740211|emb|CBI30393.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|312283541|dbj|BAJ34636.1| unnamed protein product [Thellungiella halophila] | Back alignment and taxonomy information |
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| >gi|312282157|dbj|BAJ33944.1| unnamed protein product [Thellungiella halophila] | Back alignment and taxonomy information |
|---|
| >gi|356503519|ref|XP_003520555.1| PREDICTED: probable envelope ADP,ATP carrier protein, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|186510948|ref|NP_190755.2| putative envelope ADP,ATP carrier protein [Arabidopsis thaliana] gi|332278178|sp|O65023.2|EAAC_ARATH RecName: Full=Probable envelope ADP,ATP carrier protein, chloroplastic; AltName: Full=Envelope ADP/ATP translocase; Flags: Precursor gi|110738620|dbj|BAF01235.1| hypothetical protein [Arabidopsis thaliana] gi|332645333|gb|AEE78854.1| putative envelope ADP,ATP carrier protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|3068714|gb|AAC14414.1| unknown [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 269 | ||||||
| TAIR|locus:2149725 | 415 | TAAC "AT5G01500" [Arabidopsis | 0.985 | 0.638 | 0.815 | 5.4e-118 | |
| TAIR|locus:2074358 | 381 | AT3G51870 "AT3G51870" [Arabido | 0.970 | 0.685 | 0.819 | 2.7e-116 | |
| DICTYBASE|DDB_G0285599 | 434 | mcfB "calcium-dependent mitoch | 0.899 | 0.557 | 0.375 | 4.3e-38 | |
| TAIR|locus:2127851 | 392 | SHS1 "AT4G32400" [Arabidopsis | 0.862 | 0.591 | 0.353 | 2.1e-36 | |
| UNIPROTKB|Q05AQ3 | 327 | slc25a42 "Mitochondrial coenzy | 0.899 | 0.740 | 0.375 | 9.2e-36 | |
| MGI|MGI:1917160 | 475 | Slc25a24 "solute carrier famil | 0.895 | 0.507 | 0.338 | 9.2e-36 | |
| UNIPROTKB|E1BW83 | 475 | SLC25A24 "Uncharacterized prot | 0.869 | 0.492 | 0.331 | 4e-35 | |
| RGD|1311982 | 475 | Slc25a24 "solute carrier famil | 0.895 | 0.507 | 0.334 | 8.3e-35 | |
| UNIPROTKB|Q5PQ27 | 327 | slc25a42 "Mitochondrial coenzy | 0.877 | 0.721 | 0.364 | 4.6e-34 | |
| UNIPROTKB|F6Q4L6 | 416 | SLC25A24 "Uncharacterized prot | 0.884 | 0.572 | 0.326 | 9.5e-34 |
| TAIR|locus:2149725 TAAC "AT5G01500" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1162 (414.1 bits), Expect = 5.4e-118, P = 5.4e-118
Identities = 216/265 (81%), Positives = 249/265 (93%)
Query: 1 THSIRVGQESAKKAIGFIEAITLIAKEEGIKGYWKGNLPQVIRVLPYSAVQLFAYETYKK 60
TH +R GQ+SAKKAIGFIEAITLI KEEGIKGYWKGNLPQVIR++PYSAVQLFAYETYKK
Sbjct: 145 THGVRAGQQSAKKAIGFIEAITLIGKEEGIKGYWKGNLPQVIRIVPYSAVQLFAYETYKK 204
Query: 61 LFKGKDGELSVIGRLAAGACAGMTSTFVTYPLDVLRLRLAVEPGYQTMSQVALNMLREEG 120
LF+GKDG+LSV+GRL AGACAGMTST +TYPLDVLRLRLAVEPGY+TMSQVALNMLREEG
Sbjct: 205 LFRGKDGQLSVLGRLGAGACAGMTSTLITYPLDVLRLRLAVEPGYRTMSQVALNMLREEG 264
Query: 121 FSSFYHGLGPALIGIAPYIAVNFCIFDLVKKALPEKYRQKTQTSLLTAVVSAGVATLTCY 180
+SFY+GLGP+L+ IAPYIA+NFC+FDLVKK+LPEKY+QKTQ+SLLTAVV+A +AT TCY
Sbjct: 265 VASFYNGLGPSLLSIAPYIAINFCVFDLVKKSLPEKYQQKTQSSLLTAVVAAAIATGTCY 324
Query: 181 PLDTIRRQMQMKGTPYKSVIDAFAGIVERDGVTGLYRGFVPNALKTLPNSSIRLTTFDIV 240
PLDTIRRQMQ+KGTPYKSV+DAF+GI+ R+GV GLYRGFVPNALK++PNSSI+LTTFDIV
Sbjct: 325 PLDTIRRQMQLKGTPYKSVLDAFSGIIAREGVVGLYRGFVPNALKSMPNSSIKLTTFDIV 384
Query: 241 KRIIAGSEKEFQRITEENRKKQNHN 265
K++IA SEKE QRI ++NRKK + N
Sbjct: 385 KKLIAASEKEIQRIADDNRKKASPN 409
|
|
| TAIR|locus:2074358 AT3G51870 "AT3G51870" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0285599 mcfB "calcium-dependent mitochondrial substrate carrier" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2127851 SHS1 "AT4G32400" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q05AQ3 slc25a42 "Mitochondrial coenzyme A transporter SLC25A42" [Xenopus (Silurana) tropicalis (taxid:8364)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1917160 Slc25a24 "solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1BW83 SLC25A24 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| RGD|1311982 Slc25a24 "solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q5PQ27 slc25a42 "Mitochondrial coenzyme A transporter SLC25A42" [Xenopus laevis (taxid:8355)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F6Q4L6 SLC25A24 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| fgenesh4_pm.C_LG_VI000346 | hypothetical protein (393 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 269 | |||
| PTZ00169 | 300 | PTZ00169, PTZ00169, ADP/ATP transporter on adenyla | 5e-28 | |
| pfam00153 | 96 | pfam00153, Mito_carr, Mitochondrial carrier protei | 6e-23 | |
| pfam00153 | 96 | pfam00153, Mito_carr, Mitochondrial carrier protei | 4e-20 | |
| pfam00153 | 96 | pfam00153, Mito_carr, Mitochondrial carrier protei | 7e-14 | |
| PTZ00168 | 259 | PTZ00168, PTZ00168, mitochondrial carrier protein; | 2e-08 | |
| PTZ00169 | 300 | PTZ00169, PTZ00169, ADP/ATP transporter on adenyla | 9e-06 | |
| PTZ00168 | 259 | PTZ00168, PTZ00168, mitochondrial carrier protein; | 1e-05 |
| >gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 5e-28
Identities = 62/234 (26%), Positives = 103/234 (44%), Gaps = 30/234 (12%)
Query: 16 GFIEAITLIAKEEGIKGYWKGNLPQVIRVLPYSAVQLFAYETYKKLF----KGKDGELSV 71
G + ++KE+G+ W+GN VIR P A + +K +F + D
Sbjct: 54 GIVNCFRRVSKEQGVLSLWRGNTANVIRYFPTQAFNFAFKDYFKNMFPKYNQKTDFWKFF 113
Query: 72 IGRLAAGACAGMTSTFVTYPLDVLRLRLAVEPG------YQTMSQVALNMLREEGFSSFY 125
+ +G AG +S + YPLD R RLA + G + + + + ++ GF S Y
Sbjct: 114 GVNILSGGLAGASSLLIVYPLDFARTRLASDIGKGGDREFTGLFDCLMKISKQTGFLSLY 173
Query: 126 HGLGPALIGIAPYIAVNFCIFDLVKKALPEKYRQKTQTSLL-------TAVVSAGVATLT 178
G G ++ GI Y F ++D K L + T++L T + AG+
Sbjct: 174 QGFGVSVQGIIVYRGAYFGLYDSAKALL---FGNDKNTNILYKWAVAQTVTILAGLI--- 227
Query: 179 CYPLDTIRRQMQM-------KGTPYKSVIDAFAGIVERDGVTGLYRGFVPNALK 225
YP DT+RR+M M Y +D + I++ +G+ G ++G N L+
Sbjct: 228 SYPFDTVRRRMMMMSGRKAKSEIQYTGTLDCWKKILKNEGLGGFFKGAWANVLR 281
|
Length = 300 |
| >gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein | Back alignment and domain information |
|---|
| >gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein | Back alignment and domain information |
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| >gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein | Back alignment and domain information |
|---|
| >gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 269 | |||
| KOG0764 | 299 | consensus Mitochondrial FAD carrier protein [Energ | 100.0 | |
| KOG0752 | 320 | consensus Mitochondrial solute carrier protein [En | 100.0 | |
| KOG0758 | 297 | consensus Mitochondrial carnitine-acylcarnitine ca | 100.0 | |
| PTZ00169 | 300 | ADP/ATP transporter on adenylate translocase; Prov | 100.0 | |
| KOG0753 | 317 | consensus Mitochondrial fatty acid anion carrier p | 100.0 | |
| KOG0762 | 311 | consensus Mitochondrial carrier protein [Energy pr | 100.0 | |
| KOG0760 | 302 | consensus Mitochondrial carrier protein MRS3/4 [En | 100.0 | |
| KOG0754 | 294 | consensus Mitochondrial oxodicarboxylate carrier p | 100.0 | |
| KOG0759 | 286 | consensus Mitochondrial oxoglutarate/malate carrie | 100.0 | |
| KOG0751 | 694 | consensus Mitochondrial aspartate/glutamate carrie | 100.0 | |
| PTZ00168 | 259 | mitochondrial carrier protein; Provisional | 100.0 | |
| KOG0757 | 319 | consensus Mitochondrial carrier protein - Rim2p/Mr | 100.0 | |
| KOG0761 | 361 | consensus Mitochondrial carrier protein CGI-69 [En | 100.0 | |
| KOG0768 | 323 | consensus Mitochondrial carrier protein PET8 [Ener | 100.0 | |
| KOG0765 | 333 | consensus Predicted mitochondrial carrier protein | 100.0 | |
| KOG0770 | 353 | consensus Predicted mitochondrial carrier protein | 100.0 | |
| KOG0766 | 297 | consensus Predicted mitochondrial carrier protein | 100.0 | |
| KOG0763 | 301 | consensus Mitochondrial ornithine transporter [Ene | 100.0 | |
| KOG0755 | 320 | consensus Mitochondrial oxaloacetate carrier prote | 100.0 | |
| KOG0750 | 304 | consensus Mitochondrial solute carrier protein [En | 100.0 | |
| KOG0764 | 299 | consensus Mitochondrial FAD carrier protein [Energ | 100.0 | |
| KOG0749 | 298 | consensus Mitochondrial ADP/ATP carrier proteins [ | 100.0 | |
| KOG0756 | 299 | consensus Mitochondrial tricarboxylate/dicarboxyla | 100.0 | |
| KOG0767 | 333 | consensus Mitochondrial phosphate carrier protein | 100.0 | |
| KOG0769 | 308 | consensus Predicted mitochondrial carrier protein | 100.0 | |
| KOG0036 | 463 | consensus Predicted mitochondrial carrier protein | 100.0 | |
| PTZ00169 | 300 | ADP/ATP transporter on adenylate translocase; Prov | 100.0 | |
| KOG0752 | 320 | consensus Mitochondrial solute carrier protein [En | 100.0 | |
| KOG0760 | 302 | consensus Mitochondrial carrier protein MRS3/4 [En | 100.0 | |
| KOG0757 | 319 | consensus Mitochondrial carrier protein - Rim2p/Mr | 100.0 | |
| PTZ00168 | 259 | mitochondrial carrier protein; Provisional | 100.0 | |
| KOG0754 | 294 | consensus Mitochondrial oxodicarboxylate carrier p | 99.98 | |
| KOG0753 | 317 | consensus Mitochondrial fatty acid anion carrier p | 99.97 | |
| KOG0759 | 286 | consensus Mitochondrial oxoglutarate/malate carrie | 99.97 | |
| KOG0758 | 297 | consensus Mitochondrial carnitine-acylcarnitine ca | 99.97 | |
| KOG0761 | 361 | consensus Mitochondrial carrier protein CGI-69 [En | 99.97 | |
| KOG0762 | 311 | consensus Mitochondrial carrier protein [Energy pr | 99.96 | |
| KOG0770 | 353 | consensus Predicted mitochondrial carrier protein | 99.96 | |
| KOG0751 | 694 | consensus Mitochondrial aspartate/glutamate carrie | 99.95 | |
| KOG0768 | 323 | consensus Mitochondrial carrier protein PET8 [Ener | 99.94 | |
| KOG0769 | 308 | consensus Predicted mitochondrial carrier protein | 99.93 | |
| KOG0767 | 333 | consensus Mitochondrial phosphate carrier protein | 99.93 | |
| KOG0765 | 333 | consensus Predicted mitochondrial carrier protein | 99.93 | |
| KOG0766 | 297 | consensus Predicted mitochondrial carrier protein | 99.93 | |
| KOG0755 | 320 | consensus Mitochondrial oxaloacetate carrier prote | 99.93 | |
| KOG0036 | 463 | consensus Predicted mitochondrial carrier protein | 99.91 | |
| KOG0763 | 301 | consensus Mitochondrial ornithine transporter [Ene | 99.89 | |
| KOG0756 | 299 | consensus Mitochondrial tricarboxylate/dicarboxyla | 99.88 | |
| KOG0749 | 298 | consensus Mitochondrial ADP/ATP carrier proteins [ | 99.88 | |
| KOG0750 | 304 | consensus Mitochondrial solute carrier protein [En | 99.86 | |
| KOG1519 | 297 | consensus Predicted mitochondrial carrier protein | 99.86 | |
| KOG2745 | 321 | consensus Mitochondrial carrier protein [General f | 99.77 | |
| PF00153 | 95 | Mito_carr: Mitochondrial carrier protein; InterPro | 99.75 | |
| PF00153 | 95 | Mito_carr: Mitochondrial carrier protein; InterPro | 99.69 | |
| KOG2745 | 321 | consensus Mitochondrial carrier protein [General f | 99.69 | |
| KOG2954 | 427 | consensus Mitochondrial carrier protein [General f | 99.58 | |
| KOG1519 | 297 | consensus Predicted mitochondrial carrier protein | 99.32 | |
| KOG2954 | 427 | consensus Mitochondrial carrier protein [General f | 98.62 |
| >KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-53 Score=338.28 Aligned_cols=247 Identities=26% Similarity=0.457 Sum_probs=223.9
Q ss_pred cccccccc-----cccccCcHHHHHHHHHHhhCccccccCchHHHHHHhhhhhhHHhhhHHHHHhhcCCCCC--CchHHH
Q 039878 2 HSIRVGQE-----SAKKAIGFIEAITLIAKEEGIKGYWKGNLPQVIRVLPYSAVQLFAYETYKKLFKGKDGE--LSVIGR 74 (269)
Q Consensus 2 ~~~r~~~~-----~~~~~~~~~~~~~~i~~~eGi~glyrG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 74 (269)
.|||.|.+ ..+.|.|++++++.|++.||++|||||+.|.++++.+++.++|.+|+.+++++.+..+. .++..+
T Consensus 29 ~K~R~qa~~g~~~~~~~y~g~~~~~~tI~r~eG~rGLY~Gl~P~v~G~~~sWgiYF~~Y~~~K~~~~~~~~~~~l~~~~~ 108 (299)
T KOG0764|consen 29 VKIRFQASDGRTSLRPAYKGIFGALKTIFRSEGLRGLYRGLSPNVLGSAPSWGLYFFFYDFLKSFITEGFNSGLLSVLAN 108 (299)
T ss_pred hhhhhhhccCccccchhhccHHHHHHHHHHhhhHHHHhccCcHHHHhchhhHHHHHHHHHHHHHHHhcCCCcccchHHHH
Confidence 37888887 57899999999999999999999999999999999999999999999999998765444 488999
Q ss_pred HHHHHHHHHHHHhhhccHHHHHHHHhcCC------CCCCHHHHHHHHHHhhCccccccchhhhhhhhhhhhhHHHHHHHH
Q 039878 75 LAAGACAGMTSTFVTYPLDVLRLRLAVEP------GYQTMSQVALNMLREEGFSSFYHGLGPALIGIAPYIAVNFCIFDL 148 (269)
Q Consensus 75 ~~~g~~a~~~~~~i~~Ple~ik~r~q~~~------~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~~~~~~y~~ 148 (269)
+.+++.||+++.++++|+.++|+|++.+. .|+++++++++|+++||++|||+|+.|.++. +...+++|..||.
T Consensus 109 l~sa~~AGa~t~~lTNPIWVvKTRL~~Q~~~~~~~~Y~~~f~a~rki~k~EG~rgLY~GlVP~L~G-vshgAiQF~~YE~ 187 (299)
T KOG0764|consen 109 LSSAAEAGAATTILTNPIWVVKTRLMLQSKNVQSTAYKGMFDALRKIYKEEGFRGLYKGLVPGLLG-VSHGAIQFPAYEE 187 (299)
T ss_pred HHHHHhhhHHHHHhcCCeEEEeehhhhhcccccccccccHHHHHHHHHHHHhHHHHHhhhhhHhhh-hchhhhhhhhHHH
Confidence 99999999999999999999999998874 5899999999999999999999999999995 5588999999999
Q ss_pred HHHhchhhhhhh------hhhhHHHHHHHHHHhhhhhChHHHHHHHHhhC--CCCCCCHHHHHHHHHHhhCccccccchH
Q 039878 149 VKKALPEKYRQK------TQTSLLTAVVSAGVATLTCYPLDTIRRQMQMK--GTPYKSVIDAFAGIVERDGVTGLYRGFV 220 (269)
Q Consensus 149 ~~~~~~~~~~~~------~~~~~~~~~~a~~~~~~~~~P~d~v~~r~q~~--~~~~~~~~~~~~~i~~~~G~~~ly~G~~ 220 (269)
+|..+.+..+.+ +...+..+.++-++++.++||++|+|+|||.+ .+.|.+++++++++|++||+.|||+|+.
T Consensus 188 lK~~~~~~~~~~~d~~l~n~~~i~~as~SKv~Ast~TYP~qVlRtRLQ~~~~~~~~~~~~~lIk~t~r~eG~~GfYkG~~ 267 (299)
T KOG0764|consen 188 LKLRKNRKQGRSTDNHLSNLDYIALASLSKVFASTLTYPHQVLRTRLQDQSDNPRYRGVFDLIKKTWRNEGFRGFYKGLA 267 (299)
T ss_pred HHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhcchHHHHHHHHHhcccCcccccHHHHHHHHHHHhchhhHHHHhH
Confidence 999885443332 23556666699999999999999999999998 6789999999999999999999999999
Q ss_pred HHHhhhhhhhHHHHHHHHHHHHHHccchh
Q 039878 221 PNALKTLPNSSIRLTTFDIVKRIIAGSEK 249 (269)
Q Consensus 221 ~~~~~~~~~~~i~~~iye~~~~~~~~~~~ 249 (269)
++++|..|.+.++|.+||.+++++....+
T Consensus 268 ~nLvR~vPA~~ITF~vyEnv~~~L~~~~~ 296 (299)
T KOG0764|consen 268 TNLVRTVPAACITFLVYENVKHFLVTHRT 296 (299)
T ss_pred HHHhhccccceeeeehHHHHHHHHhcccc
Confidence 99999999999999999999998876654
|
|
| >KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional | Back alignment and domain information |
|---|
| >KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] | Back alignment and domain information |
|---|
| >PTZ00168 mitochondrial carrier protein; Provisional | Back alignment and domain information |
|---|
| >KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional | Back alignment and domain information |
|---|
| >KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] | Back alignment and domain information |
|---|
| >PTZ00168 mitochondrial carrier protein; Provisional | Back alignment and domain information |
|---|
| >KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG2745 consensus Mitochondrial carrier protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] | Back alignment and domain information |
|---|
| >PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] | Back alignment and domain information |
|---|
| >KOG2745 consensus Mitochondrial carrier protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG2954 consensus Mitochondrial carrier protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG2954 consensus Mitochondrial carrier protein [General function prediction only] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 269 | ||||
| 1okc_A | 297 | Structure Of Mitochondrial AdpATP CARRIER IN COMPLE | 3e-27 | ||
| 2lck_A | 303 | Structure Of The Mitochondrial Uncoupling Protein 2 | 1e-14 | ||
| 2lck_A | 303 | Structure Of The Mitochondrial Uncoupling Protein 2 | 2e-11 |
| >pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 | Back alignment and structure |
|
| >pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 | Back alignment and structure |
| >pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 269 | |||
| 1okc_A | 297 | ADP, ATP carrier protein heart isoform T1; mitocho | 3e-92 | |
| 1okc_A | 297 | ADP, ATP carrier protein heart isoform T1; mitocho | 1e-39 | |
| 1okc_A | 297 | ADP, ATP carrier protein heart isoform T1; mitocho | 5e-11 | |
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 2e-50 | |
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 2e-36 | |
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 7e-27 | |
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 2e-13 |
| >1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 | Back alignment and structure |
|---|
Score = 273 bits (700), Expect = 3e-92
Identities = 72/262 (27%), Positives = 112/262 (42%), Gaps = 19/262 (7%)
Query: 1 THSIRVGQESAKKAIGFIEAITLIAKEEGIKGYWKGNLPQVIRVLPYSAVQLFAYETYKK 60
+ K+ G I+ + I KE+G +W+GNL VIR P A+ + YK+
Sbjct: 37 VQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQ 96
Query: 61 LFKGKDG-----ELSVIGRLAAGACAGMTSTFVTYPLDVLRLRLAVEPG-------YQTM 108
+F G G LA+G AG TS YPLD R RLA + G + +
Sbjct: 97 IFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGL 156
Query: 109 SQVALNMLREEGFSSFYHGLGPALIGIAPYIAVNFCIFDLVKKALPEKYRQKTQTSLLTA 168
+ + +G Y G ++ GI Y A F ++D K LP+ S + A
Sbjct: 157 GNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIA 216
Query: 169 VVSAGVATLTCYPLDTIRRQMQMKG------TPYKSVIDAFAGIVERDGVTGLYRGFVPN 222
VA L YP DT+RR+M M+ Y +D + I + +G ++G N
Sbjct: 217 QTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSN 276
Query: 223 ALKTLPNSSIRLTTFDIVKRII 244
L+ + + L +D +K+ +
Sbjct: 277 VLRGMG-GAFVLVLYDEIKKFV 297
|
| >1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 | Back alignment and structure |
|---|
| >1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 | Back alignment and structure |
|---|
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 | Back alignment and structure |
|---|
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 | Back alignment and structure |
|---|
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 | Back alignment and structure |
|---|
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 269 | |||
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 100.0 | |
| 1okc_A | 297 | ADP, ATP carrier protein heart isoform T1; mitocho | 100.0 | |
| 1okc_A | 297 | ADP, ATP carrier protein heart isoform T1; mitocho | 100.0 | |
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 100.0 |
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-52 Score=355.96 Aligned_cols=252 Identities=19% Similarity=0.373 Sum_probs=228.2
Q ss_pred cccccccccc----------cccCcHHHHHHHHHHhhCccccccCchHHHHHHhhhhhhHHhhhHHHHHhhcCCCCCCch
Q 039878 2 HSIRVGQESA----------KKAIGFIEAITLIAKEEGIKGYWKGNLPQVIRVLPYSAVQLFAYETYKKLFKGKDGELSV 71 (269)
Q Consensus 2 ~~~r~~~~~~----------~~~~~~~~~~~~i~~~eGi~glyrG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (269)
.|+|+|.+.. ..|.++++++++|+++||++|||||+.|++++.++..+++|.+|+.+++.+.+.....+.
T Consensus 25 iKtrlQ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~~~~~~~~~~~ 104 (303)
T 2lck_A 25 AKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSEHAGI 104 (303)
T ss_dssp HHHHSSCCTTCCSHHHHCSCSSCSCHHHHHHHHHHHHCHHHHHSSHHHHHHHHHHHHHHTTTHHHHHHHHHSCCCSSCCH
T ss_pred HHHHHHhhhccccccccccCCCCCCHHHHHHHHHHhhCHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcH
Confidence 5888888743 368999999999999999999999999999999999999999999999988765335678
Q ss_pred HHHHHHHHHHHHHHHhhhccHHHHHHHHhcCC------CCCCHHHHHHHHHHhhCccccccchhhhhhhhhhhhhHHHHH
Q 039878 72 IGRLAAGACAGMTSTFVTYPLDVLRLRLAVEP------GYQTMSQVALNMLREEGFSSFYHGLGPALIGIAPYIAVNFCI 145 (269)
Q Consensus 72 ~~~~~~g~~a~~~~~~i~~Ple~ik~r~q~~~------~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~~~~~~ 145 (269)
...+++|++||+++.++++|+|++|+|+|++. .|.+.++++++|++++|++|||+|+.+++++++++.+++|.+
T Consensus 105 ~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~f~~ 184 (303)
T 2lck_A 105 GSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVT 184 (303)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSCCCSSSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCcHHHHHHHHhcccccCCCCCCCCHHHHHHHHHHhcChhhhhCCccHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999975 588999999999999999999999999999999999999999
Q ss_pred HHHHHHhchhhh--hhhhhhhHHHHHHHHHHhhhhhChHHHHHHHHhhCCC-CCCCHHHHHHHHHHhhCccccccchHHH
Q 039878 146 FDLVKKALPEKY--RQKTQTSLLTAVVSAGVATLTCYPLDTIRRQMQMKGT-PYKSVIDAFAGIVERDGVTGLYRGFVPN 222 (269)
Q Consensus 146 y~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~~~~~P~d~v~~r~q~~~~-~~~~~~~~~~~i~~~~G~~~ly~G~~~~ 222 (269)
||.+++.+.+.. ..+....+++|++||++++++++|+|+||+|+|.+.. .|+++++|+++++++||++|||||+.++
T Consensus 185 ye~~k~~l~~~~~~~~~~~~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~~~~y~~~~~~~~~i~~~eG~~glyrG~~~~ 264 (303)
T 2lck_A 185 YDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQYHSAGHCALTMLRKEGPRAFYKGFMPS 264 (303)
T ss_dssp HHHHHHTTTTTTSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSSCCSHHHHHHHHHHSSCTHHHHSCCHHH
T ss_pred HHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhccccccCCHHHHHHHHHHHcChHHhhccHHHH
Confidence 999999886543 2344567899999999999999999999999999854 6999999999999999999999999999
Q ss_pred HhhhhhhhHHHHHHHHHHHHHHccchhhhhh
Q 039878 223 ALKTLPNSSIRLTTFDIVKRIIAGSEKEFQR 253 (269)
Q Consensus 223 ~~~~~~~~~i~~~iye~~~~~~~~~~~~~~~ 253 (269)
++|.+|.++++|.+||.+++.+.+..+...+
T Consensus 265 ~~r~~p~~~i~f~~ye~~k~~l~~~~~~~~~ 295 (303)
T 2lck_A 265 FLRLGSWNVVMFVTYEQLKRALMAAYQSREA 295 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCCCCHHHHHHC
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHhccCCCC
Confidence 9999999999999999999988765554433
|
| >1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* | Back alignment and structure |
|---|
| >1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* | Back alignment and structure |
|---|
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 269 | ||||
| d1okca_ | 292 | f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta | 1e-25 | |
| d1okca_ | 292 | f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta | 2e-13 |
| >d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Mitochondrial carrier superfamily: Mitochondrial carrier family: Mitochondrial carrier domain: ADP,ATP carrier protein species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Score = 100 bits (248), Expect = 1e-25
Identities = 71/247 (28%), Positives = 108/247 (43%), Gaps = 19/247 (7%)
Query: 10 SAKKAIGFIEAITLIAKEEGIKGYWKGNLPQVIRVLPYSAVQLFAYETYKKLFKG----- 64
+ K+ G I+ + I KE+G +W+GNL VIR P A+ + YK++F G
Sbjct: 45 AEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRH 104
Query: 65 KDGELSVIGRLAAGACAGMTSTFVTYPLDVLRLRLAVE-------PGYQTMSQVALNMLR 117
K G LA+G AG TS YPLD R RLA + + + + +
Sbjct: 105 KQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFK 164
Query: 118 EEGFSSFYHGLGPALIGIAPYIAVNFCIFDLVKKALPEKYRQKTQTSLLTAVVSAGVATL 177
+G Y G ++ GI Y A F ++D K LP+ S + A VA L
Sbjct: 165 SDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGL 224
Query: 178 TCYPLDTIRRQMQM------KGTPYKSVIDAFAGIVERDGVTGLYRGFVPNALKTLPNSS 231
YP DT+RR+M M Y +D + I + +G ++G N L+ + +
Sbjct: 225 VSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAF 284
Query: 232 IRLTTFD 238
+ L +D
Sbjct: 285 V-LVLYD 290
|
| >d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 269 | |||
| d1okca_ | 292 | ADP,ATP carrier protein {Cow (Bos taurus), heart i | 100.0 | |
| d1okca_ | 292 | ADP,ATP carrier protein {Cow (Bos taurus), heart i | 99.97 |
| >d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Mitochondrial carrier superfamily: Mitochondrial carrier family: Mitochondrial carrier domain: ADP,ATP carrier protein species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00 E-value=1.3e-44 Score=304.86 Aligned_cols=239 Identities=29% Similarity=0.549 Sum_probs=215.2
Q ss_pred Cccccccccc-------ccccCcHHHHHHHHHHhhCccccccCchHHHHHHhhhhhhHHhhhHHHHHhhcCCCCC-----
Q 039878 1 THSIRVGQES-------AKKAIGFIEAITLIAKEEGIKGYWKGNLPQVIRVLPYSAVQLFAYETYKKLFKGKDGE----- 68 (269)
Q Consensus 1 ~~~~r~~~~~-------~~~~~~~~~~~~~i~~~eGi~glyrG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 68 (269)
|.|+|+|.|. ...|+|+++++++++++||+++||||+.+.++...+...++|.+|+.++..+......
T Consensus 29 ~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (292)
T d1okca_ 29 RVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFW 108 (292)
T ss_dssp HHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTCHH
T ss_pred HHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhcccchhHHHHHHHHHHHhcccccccccc
Confidence 4688988864 3467899999999999999999999999999999999999999999999888654332
Q ss_pred CchHHHHHHHHHHHHHHHhhhccHHHHHHHHhcCC-------CCCCHHHHHHHHHHhhCccccccchhhhhhhhhhhhhH
Q 039878 69 LSVIGRLAAGACAGMTSTFVTYPLDVLRLRLAVEP-------GYQTMSQVALNMLREEGFSSFYHGLGPALIGIAPYIAV 141 (269)
Q Consensus 69 ~~~~~~~~~g~~a~~~~~~i~~Ple~ik~r~q~~~-------~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~~ 141 (269)
.....++++|.+|++++.++++|+|++|+|+|.+. .+.+..+.++++++++|+++||+|+.+++++++++.++
T Consensus 109 ~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~l~~G~~~~~~~~~~~~~~ 188 (292)
T d1okca_ 109 RYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAA 188 (292)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhhhhhHHhhhhhhhhhheeeeccccccccccccccHHHHHHHhhhccchhhhhccccccccceehHhhh
Confidence 23456788999999999999999999999999863 46789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhchhhhhhhhhhhHHHHHHHHHHhhhhhChHHHHHHHHhhCCC------CCCCHHHHHHHHHHhhCcccc
Q 039878 142 NFCIFDLVKKALPEKYRQKTQTSLLTAVVSAGVATLTCYPLDTIRRQMQMKGT------PYKSVIDAFAGIVERDGVTGL 215 (269)
Q Consensus 142 ~~~~y~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~d~v~~r~q~~~~------~~~~~~~~~~~i~~~~G~~~l 215 (269)
+|..||.+++.+.+.........++++.+++++++++++|+||||+|+|.+.. .|.++++|+++++++||+++|
T Consensus 189 ~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~a~~~t~P~dvvktR~q~~~~~~~~~~~y~~~~~~~~~i~~~eG~~~l 268 (292)
T d1okca_ 189 YFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAF 268 (292)
T ss_dssp HHHHHHHHHHSSCGGGCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCGGGCSCSSHHHHHHHHHHHHCGGGG
T ss_pred hhhhccchhhhcccccccchHHHHHHHHHHHHHHhhccccHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhcCcCcc
Confidence 99999999999988877778888999999999999999999999999998753 588999999999999999999
Q ss_pred ccchHHHHhhhhhhhHHHHHHHHHH
Q 039878 216 YRGFVPNALKTLPNSSIRLTTFDIV 240 (269)
Q Consensus 216 y~G~~~~~~~~~~~~~i~~~iye~~ 240 (269)
|||+.++++|.++ +++.|.+||.+
T Consensus 269 yrG~~~~~~r~i~-~~i~~~~ye~l 292 (292)
T d1okca_ 269 FKGAWSNVLRGMG-GAFVLVLYDEI 292 (292)
T ss_dssp GTTHHHHHHHHHH-HHHHHHHHHTC
T ss_pred cccHHHHHHHHHH-HHhhhhHhhcC
Confidence 9999999999755 68999999963
|
| >d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} | Back information, alignment and structure |
|---|