Citrus Sinensis ID: 039929

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110---
Protein Sequence
QVFRGESTEPQDLIFSAKMSSMWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAGESSTIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEINHASS
Secondary Structure (PSIPRED)
cEEEccccccccEEEEEEEccccccEEEEEEEEEccccccEEEEEEEccccccEEEEEEcccccEEEEEEEcccccEEEEEEEEEEEEEEccccHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
ccEEccccccccEEEEEEEccEEEEccEEEEEEccccccccccEEEEEccccccEEEEEccccEEEEEEEEcccccEEEEcccEEEEEEcccHHHHHHHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
qvfrgestepqDLIFSAKMSSMWNVRTKLDVFLanntkedvcdfrvkgswfersctiyageSSTIIAQMHKKHTVQSiligkdnfavtvypnIDYAFIVALIVILDEINHASS
Flexible Loop (DISEMBL)
qvfrgestepqdlifsakmssmwNVRTKLDVFlanntkedvcdfrvkgswfERSCTIYAGESSTIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEINHASS
Low Complexity Region (SEG)
QVFRGESTEPQDLIFSAKMSSMWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAGESSTIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEINHASS
Disordered region (IsUnstruct)
************LIFSAKMSSMWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAGESSTIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEI*****
Disordered Region (DISOPRED)
QVFRG*STEPQDLIFSAKMSSMW*VRTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAGESSTIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVIL*EINH***
Disordered Region (DISEMBL)
*********PQDLIFSAKMSSMWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAGESSTIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEINHASS
Disordered Region (DISPRO)
****GESTEPQDLIFSAKMSSMWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAGESSTIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEIN****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhhiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
QVFRGESTEPQDLIFSAKMSSMWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAGESSTIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEINHASS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	113	2.2.26 [Sep-21-2011]
Q9LZX1	217	Protein LURP-one-related	yes	no	0.973	0.506	0.663	2e-42
Q9SF24	194	Protein LURP-one-related	no	no	0.991	0.577	0.628	4e-38
Q9LQ36	224	Protein LURP-one-related	no	no	0.955	0.482	0.583	2e-32
Q9ZQR8	207	Protein LURP1 OS=Arabidop	no	no	0.991	0.541	0.562	3e-31
Q9LSQ1	185	Protein LURP-one-related	no	no	0.902	0.551	0.429	2e-20
Q9LYM3	204	Protein LURP-one-related	no	no	0.911	0.504	0.372	7e-12
Q9LVZ8	220	Protein LURP-one-related	no	no	0.911	0.468	0.327	1e-10
B3H5L1	197	Protein LURP-one-related	no	no	0.973	0.558	0.313	2e-10
Q8GWL2	182	Protein LURP-one-related	no	no	0.884	0.549	0.292	2e-09
Q9SSC7	210	Protein LURP-one-related	no	no	0.911	0.490	0.280	5e-08

>sp|Q9LZX1|LOR15_ARATH Protein LURP-one-related 15 OS=Arabidopsis thaliana GN=At5g01750 PE=1 SV=1

 Score =  170 bits (431), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 73/110 (66%), Positives = 92/110 (83%)

Query: 1   QVFRGESTEPQDLIFSAKMSSMWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAG 60
           QVFRG ST+ +DL+++ K SSM  ++TKLDVFL +N  E  CDFRVKGSW ERSC +YAG
Sbjct: 103 QVFRGGSTDQRDLLYTVKRSSMLQLKTKLDVFLGHNKDEKRCDFRVKGSWLERSCVVYAG 162

Query: 61  ESSTIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEINH 110
           ES  I+AQMH+KHTVQS+ +GKDNF+VTVYPN+DYAFI +L+VILD++N 
Sbjct: 163 ESDAIVAQMHRKHTVQSVFLGKDNFSVTVYPNVDYAFIASLVVILDDVNR 212

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SF24|LOR10_ARATH Protein LURP-one-related 10 OS=Arabidopsis thaliana GN=At3g11740 PE=2 SV=2

 Score =  156 bits (394), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 71/113 (62%), Positives = 92/113 (81%), Gaps = 1/113 (0%)

Query: 2   VFRGESTEPQDLIFSAKMSSMWNV-RTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAG 60
           V+RG+ST+  DL+++ K SSM  + + KLD+FLA+N +  +CDF VKGSW +RSC +YAG
Sbjct: 80  VYRGKSTDQSDLLYTLKRSSMIQIMKPKLDIFLAHNKEMKICDFHVKGSWIDRSCVVYAG 139

Query: 61  ESSTIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEINHASS 113
           +S  I+AQMHKKHT QSILIGK NF+VTVYPN+D+AFIV+LIVILD+IN   S
Sbjct: 140 KSDAIVAQMHKKHTAQSILIGKSNFSVTVYPNVDFAFIVSLIVILDDINREDS 192

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LQ36|LOR1_ARATH Protein LURP-one-related 1 OS=Arabidopsis thaliana GN=At1g33840 PE=2 SV=2

 Score =  137 bits (346), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 63/108 (58%), Positives = 83/108 (76%)

Query: 2   VFRGESTEPQDLIFSAKMSSMWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAGE 61
           VFRG STE  DL+++ K S+M  + TKLDVFLA+N ++  CD+R++G W E SC +YAG+
Sbjct: 104 VFRGGSTEEVDLLYTVKRSNMVQITTKLDVFLADNIEQKKCDYRLEGVWLETSCFVYAGD 163

Query: 62  SSTIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEIN 109
           S  I+AQM +K T+QS+L GKDNF +TV PN+DYAFI +LIVIL EI 
Sbjct: 164 SDIILAQMREKKTMQSVLFGKDNFCLTVNPNVDYAFIASLIVILVEIQ 211

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZQR8|LURP1_ARATH Protein LURP1 OS=Arabidopsis thaliana GN=LURP1 PE=2 SV=1

 Score =  133 bits (334), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 63/112 (56%), Positives = 81/112 (72%)

Query: 1   QVFRGESTEPQDLIFSAKMSSMWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAG 60
           QVFRG STE   L+++ K SSM  +  KL+VFLANN +E +CDF+VKG+W + SC +YAG
Sbjct: 83  QVFRGGSTEEGALLYTVKRSSMIQLAPKLEVFLANNVEEKICDFKVKGAWLDDSCVVYAG 142

Query: 61  ESSTIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEINHAS 112
           +S TIIA M  K T++    GKD+F+VTV  N+DYAFI +LIVIL EI  A 
Sbjct: 143 DSDTIIAHMCGKQTMRGFFFGKDHFSVTVDKNVDYAFIASLIVILVEIEKAG 194

Involved in basal defense against virulent oomycetes. Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LSQ1|LOR13_ARATH Protein LURP-one-related 13 OS=Arabidopsis thaliana GN=At3g16900 PE=3 SV=1

 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 49/114 (42%), Positives = 72/114 (63%), Gaps = 12/114 (10%)

Query: 1   QVFRGESTEPQDLIFSAKMSSMWNVRTKLDVFLANN-TKEDVCDFRVKGSWFERSCTIYA 59
           QV+RG   +  D IF+ K SS   ++T+++VFL +N T+E  CDF +KG + +R+CTIY 
Sbjct: 82  QVYRGSDLD--DKIFTVKRSSTVQLKTRVEVFLKHNQTRESSCDFTIKGRFMKRACTIYV 139

Query: 60  GESSTIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEINHASS 113
            +S+ IIAQ+++ H         +    T+YPN+DYAFIV LI I D IN  + 
Sbjct: 140 ADSTKIIAQVYEGH---------ERLVATIYPNVDYAFIVTLIFIFDLINMGTG 184

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LYM3|LOR14_ARATH Protein LURP-one-related 14 OS=Arabidopsis thaliana GN=At3g56180 PE=2 SV=2

 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 41/110 (37%), Positives = 64/110 (58%), Gaps = 7/110 (6%)

Query: 1   QVFRGESTEPQDLIFSAKMSSMWNVRTKLDVFLANNT---KEDVCDFRVKGSWFERSCTI 57
           +V  GES E +DL+F+ + S   +++T +DVFL  N    K + CDF   G +   S  +
Sbjct: 94  EVHGGESKEREDLLFTVQQSQAVSLKTSVDVFLPENNNVKKTNTCDFHASGGYSNISFKV 153

Query: 58  YAGESSTIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDE 107
           +  ++  +IA +    T  S   GK NF V V P +DYAFI+AL+V++D+
Sbjct: 154 FKADA--LIAGVG--FTWGSFCKGKYNFKVRVNPEVDYAFIIALLVMVDD 199

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LVZ8|LOR12_ARATH Protein LURP-one-related 12 OS=Arabidopsis thaliana GN=At3g15810 PE=2 SV=1

 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 4/107 (3%)

Query: 3   FRGESTEPQDLIFSAKMSSMWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAGES 62
           F GE +E Q  IFS + SS+   R  ++V + + T E+   + + G + +RSC IY  + 
Sbjct: 100 FLGERSEGQKPIFSVRRSSIIG-RCTMEVEVYDGTGEE---YIIDGDFSQRSCLIYDTKK 155

Query: 63  STIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEIN 109
            T+     K     ++++G+D F + + P  D AF + L+V+LD+IN
Sbjct: 156 CTVAEIKRKVDASTNVMLGRDVFTLEIKPGFDGAFAMGLVVVLDQIN 202

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|B3H5L1|LOR9_ARATH Protein LURP-one-related 9 OS=Arabidopsis thaliana GN=At3g10986 PE=3 SV=1

 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 69/115 (60%), Gaps = 5/115 (4%)

Query: 1   QVFRGESTEPQDLIFSAKMSSMWNVRTKLDVFLA-NNTKEDVC----DFRVKGSWFERSC 55
           +V++G+STE  +L+FSA+  ++ + +T LDV L  + +  D+     DF+  G +   S 
Sbjct: 81  EVYKGDSTESDNLLFSAREPNLLSFKTSLDVTLPPDQSSTDISSVEPDFQTFGRYIGSSF 140

Query: 56  TIYAGESSTIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEINH 110
            ++    +T++A++    T   ++ G  +F V V P +D+AF+VAL+VI D+ ++
Sbjct: 141 KLFEPIHNTLLAEVVHDFTWGGLIKGSYSFKVRVNPYVDFAFVVALLVITDDTSN 195

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8GWL2|LOR7_ARATH Protein LURP-one-related 7 OS=Arabidopsis thaliana GN=At2g30270 PE=2 SV=1

 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 66/106 (62%), Gaps = 6/106 (5%)

Query: 1   QVFRGESTEPQDLIFSAKMSSMWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAG 60
           ++ +G+  + +DL+ + K +S    +T+ +V  A  + E++    +KG  F++SCTIY+ 
Sbjct: 79  ELHKGDVEKRKDLVLTVKRTSKRFSKTESEVSFAGESSENLV---IKGVPFQKSCTIYSQ 135

Query: 61  ESSTIIAQMHKKHTVQSILIGKDNFAVTVYP-NIDYAFIVALIVIL 105
           +S  I+AQ    + ++ I +G+  F +T++P +ID++ +VA++ I 
Sbjct: 136 DS--IVAQTSLMYKLRQIYVGRSKFRLTIFPGSIDHSLVVAMVAIF 179

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SSC7|LOR5_ARATH Protein LURP-one-related 5 OS=Arabidopsis thaliana GN=At1g80120 PE=1 SV=1

 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 62/107 (57%), Gaps = 4/107 (3%)

Query: 3   FRGESTEPQDLIFSAKMSSMWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAGES 62
           + GE ++ Q  IF  + SS+   R  + V +  + +    ++ ++GS+  R+CT+   E+
Sbjct: 87  YLGERSDGQKPIFGVRRSSIIG-RNSVTVEVYGDYQ--CSEYLIEGSFGARNCTVVEAET 143

Query: 63  STIIAQMHKK-HTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEI 108
              +A++ +K     ++++GKD F++ V P  D AF + L+++LD+I
Sbjct: 144 RRKVAEIRRKVDASTNVMLGKDVFSLNVKPGFDGAFAMGLVLVLDQI 190

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	113
388504720	214	unknown [Lotus japonicus]	1.0	0.528	0.805	5e-48
388516681	216	unknown [Lotus japonicus]	0.973	0.509	0.818	6e-48
356496281	198	PREDICTED: protein LURP-one-related 15-l	0.964	0.550	0.807	1e-47
351722077	198	uncharacterized protein LOC100527088 [Gl	0.973	0.555	0.818	3e-47
255637572	216	unknown [Glycine max]	0.973	0.509	0.8	7e-47
356568182	216	PREDICTED: protein LURP-one-related 15-l	0.973	0.509	0.8	8e-47
225439608	216	PREDICTED: protein LURP-one-related 15 [	0.964	0.504	0.752	7e-46
356532197	215	PREDICTED: protein LURP-one-related 15-l	0.964	0.506	0.798	1e-45
297735581	192	unnamed protein product [Vitis vinifera]	0.964	0.567	0.752	1e-45
357506501	226	hypothetical protein MTR_7g072170 [Medic	0.964	0.482	0.761	3e-45

>gi|388504720|gb|AFK40426.1| unknown [Lotus japonicus]

 Score =  194 bits (494), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 91/113 (80%), Positives = 100/113 (88%)

Query: 1   QVFRGESTEPQDLIFSAKMSSMWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAG 60
           Q +RGESTE +DLIF+ K SS+   +TKLDVFLA NTKEDVCDF+VKGSWFERSC +YAG
Sbjct: 102 QAYRGESTEAKDLIFTLKRSSLIQFKTKLDVFLATNTKEDVCDFKVKGSWFERSCVVYAG 161

Query: 61  ESSTIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEINHASS 113
           ES+TI+AQMHKKHTVQSILIGKDNF VTVYPNIDYAFIVALIVILDEIN   S
Sbjct: 162 ESNTIVAQMHKKHTVQSILIGKDNFTVTVYPNIDYAFIVALIVILDEINEDES 214

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388516681|gb|AFK46402.1| unknown [Lotus japonicus]

 Score =  194 bits (493), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 90/110 (81%), Positives = 99/110 (90%)

Query: 1   QVFRGESTEPQDLIFSAKMSSMWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAG 60
           Q +RGESTE +DLIF+ K SS+   +TKLDVFLA NTKEDVCDF+VKGSWFERSC +YAG
Sbjct: 102 QAYRGESTEAKDLIFTLKRSSLIQFKTKLDVFLATNTKEDVCDFKVKGSWFERSCVVYAG 161

Query: 61  ESSTIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEINH 110
           ES+TI+AQMHKKHTVQSILIGKDNF VTVYPNIDYAFIVALIVILDEIN 
Sbjct: 162 ESNTIVAQMHKKHTVQSILIGKDNFTVTVYPNIDYAFIVALIVILDEINE 211

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496281|ref|XP_003516997.1| PREDICTED: protein LURP-one-related 15-like [Glycine max]

 Score =  193 bits (490), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 88/109 (80%), Positives = 100/109 (91%)

Query: 1   QVFRGESTEPQDLIFSAKMSSMWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAG 60
           Q+FRGESTEP+DLIFS K SS + ++TKLDVFLANNTKE+VCDF+VKGSWFERSC +YAG
Sbjct: 84  QIFRGESTEPKDLIFSVKRSSFFQLKTKLDVFLANNTKEEVCDFKVKGSWFERSCVVYAG 143

Query: 61  ESSTIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEIN 109
           ES  I+AQMHKKHTVQSI+ GKDNF VTVYPNIDYAFIVALI+ILDEI+
Sbjct: 144 ESLNIVAQMHKKHTVQSIVFGKDNFMVTVYPNIDYAFIVALILILDEIH 192

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351722077|ref|NP_001238511.1| uncharacterized protein LOC100527088 [Glycine max] gi|255631528|gb|ACU16131.1| unknown [Glycine max]

 Score =  192 bits (487), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 90/110 (81%), Positives = 100/110 (90%)

Query: 1   QVFRGESTEPQDLIFSAKMSSMWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAG 60
           QVFRGESTE +DLIFS K SS++ ++TKLDVFLANNTKE+VCDF+VKGSWFERSC +YAG
Sbjct: 84  QVFRGESTELKDLIFSVKKSSVFQLKTKLDVFLANNTKEEVCDFKVKGSWFERSCVVYAG 143

Query: 61  ESSTIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEINH 110
           ES TI AQMHKKHTVQSI +GKDNF VTVYPNIDYAFIVALI+ILDEIN 
Sbjct: 144 ESLTIAAQMHKKHTVQSIALGKDNFIVTVYPNIDYAFIVALILILDEINQ 193

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255637572|gb|ACU19112.1| unknown [Glycine max]

 Score =  190 bits (483), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 88/110 (80%), Positives = 97/110 (88%)

Query: 1   QVFRGESTEPQDLIFSAKMSSMWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAG 60
           Q FRGESTE +DLIF+ K SS+   +TKLDVFLANNTKEDVCDF+VKGSW ERSC +YAG
Sbjct: 102 QAFRGESTEAKDLIFTLKRSSLIQFKTKLDVFLANNTKEDVCDFKVKGSWLERSCVVYAG 161

Query: 61  ESSTIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEINH 110
           ES+ I+AQMHKKHTVQSILIGKD F VTVYPNIDYAF+VALIVILDEIN 
Sbjct: 162 ESNNIVAQMHKKHTVQSILIGKDQFMVTVYPNIDYAFVVALIVILDEINE 211

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356568182|ref|XP_003552292.1| PREDICTED: protein LURP-one-related 15-like [Glycine max]

 Score =  190 bits (483), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 88/110 (80%), Positives = 97/110 (88%)

Query: 1   QVFRGESTEPQDLIFSAKMSSMWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAG 60
           Q FRGESTE +DLIF+ K SS+   +TKLDVFLANNTKEDVCDF+VKGSW ERSC +YAG
Sbjct: 102 QAFRGESTEAKDLIFTLKRSSLIQFKTKLDVFLANNTKEDVCDFKVKGSWLERSCVVYAG 161

Query: 61  ESSTIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEINH 110
           ES+ I+AQMHKKHTVQSILIGKD F VTVYPNIDYAF+VALIVILDEIN 
Sbjct: 162 ESNNIVAQMHKKHTVQSILIGKDQFMVTVYPNIDYAFVVALIVILDEINE 211

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225439608|ref|XP_002266957.1| PREDICTED: protein LURP-one-related 15 [Vitis vinifera]

 Score =  187 bits (475), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 82/109 (75%), Positives = 101/109 (92%)

Query: 1   QVFRGESTEPQDLIFSAKMSSMWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAG 60
           QVFRGES++P+DL+FS K+SS+  ++T LDVFLA NTKE++CDF++KGSWF+RSCT+YAG
Sbjct: 103 QVFRGESSDPKDLLFSTKLSSIIQLKTGLDVFLAANTKEEICDFKLKGSWFDRSCTVYAG 162

Query: 61  ESSTIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEIN 109
            S+TIIAQMHKKH VQS+++GKD FAVTVYPN+DYAFIVALIVILDEIN
Sbjct: 163 NSNTIIAQMHKKHNVQSVVLGKDTFAVTVYPNVDYAFIVALIVILDEIN 211

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532197|ref|XP_003534660.1| PREDICTED: protein LURP-one-related 15-like [Glycine max]

 Score =  186 bits (473), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 87/109 (79%), Positives = 97/109 (88%)

Query: 1   QVFRGESTEPQDLIFSAKMSSMWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAG 60
           Q FRGEST+ +DLIF+ K SS+   +TKL VFLANNTKEDVCDF+VKGSW ERSC +YAG
Sbjct: 101 QAFRGESTDAKDLIFTLKRSSLIQFKTKLHVFLANNTKEDVCDFKVKGSWLERSCVVYAG 160

Query: 61  ESSTIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEIN 109
           ES+ I+AQMHKKHTVQSILIGKD+F VTVYPNIDYAFIVALIVILDEIN
Sbjct: 161 ESNNIVAQMHKKHTVQSILIGKDHFMVTVYPNIDYAFIVALIVILDEIN 209

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297735581|emb|CBI18075.3| unnamed protein product [Vitis vinifera]

 Score =  186 bits (473), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 82/109 (75%), Positives = 101/109 (92%)

Query: 1   QVFRGESTEPQDLIFSAKMSSMWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAG 60
           QVFRGES++P+DL+FS K+SS+  ++T LDVFLA NTKE++CDF++KGSWF+RSCT+YAG
Sbjct: 79  QVFRGESSDPKDLLFSTKLSSIIQLKTGLDVFLAANTKEEICDFKLKGSWFDRSCTVYAG 138

Query: 61  ESSTIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEIN 109
            S+TIIAQMHKKH VQS+++GKD FAVTVYPN+DYAFIVALIVILDEIN
Sbjct: 139 NSNTIIAQMHKKHNVQSVVLGKDTFAVTVYPNVDYAFIVALIVILDEIN 187

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357506501|ref|XP_003623539.1| hypothetical protein MTR_7g072170 [Medicago truncatula] gi|355498554|gb|AES79757.1| hypothetical protein MTR_7g072170 [Medicago truncatula]

 Score =  185 bits (470), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 83/109 (76%), Positives = 100/109 (91%)

Query: 1   QVFRGESTEPQDLIFSAKMSSMWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAG 60
           + +RGEST+ +DLIF+ K SS+  ++TKLDVFLANNTKEDVCDF+VKGSWFERSC +YAG
Sbjct: 99  EAYRGESTDSKDLIFTLKRSSLIQMKTKLDVFLANNTKEDVCDFKVKGSWFERSCIVYAG 158

Query: 61  ESSTIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEIN 109
           ES+ I+AQMHKKHTVQS+LIGKD+F VT+YPN+DYAFIVALIVIL+EIN
Sbjct: 159 ESNNIVAQMHKKHTVQSLLIGKDHFMVTIYPNVDYAFIVALIVILNEIN 207

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	113
TAIR|locus:2181082	217	AT5G01750 "AT5G01750" [Arabido	0.964	0.502	0.669	9.9e-39
TAIR|locus:2081481	194	AT3G11740 "AT3G11740" [Arabido	0.991	0.577	0.628	3.5e-36
TAIR|locus:2055250	207	LURP1 "AT2G14560" [Arabidopsis	0.982	0.536	0.567	4.4e-29
TAIR|locus:2086062	185	AT3G16900 "AT3G16900" [Arabido	0.867	0.529	0.445	1.9e-19
TAIR|locus:2078506	204	AT3G56180 "AT3G56180" [Arabido	0.911	0.504	0.381	2.1e-13
TAIR|locus:4515103053	197	AT3G10986 "AT3G10986" [Arabido	0.973	0.558	0.313	1e-11
TAIR|locus:2093242	220	AT3G15810 "AT3G15810" [Arabido	0.911	0.468	0.327	5.8e-11
TAIR|locus:2065753	182	AT2G30270 "AT2G30270" [Arabido	0.876	0.543	0.295	1.2e-10
TAIR|locus:2016299	210	AT1G80120 "AT1G80120" [Arabido	0.911	0.490	0.280	7.6e-09
TAIR|locus:2180459	215	AT5G20640 "AT5G20640" [Arabido	0.592	0.311	0.397	2.4e-06

TAIR|locus:2181082 AT5G01750 "AT5G01750" [Arabidopsis thaliana (taxid:3702)]

 Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
 Identities = 73/109 (66%), Positives = 92/109 (84%)

Query:     1 QVFRGESTEPQDLIFSAKMSSMWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAG 60
             QVFRG ST+ +DL+++ K SSM  ++TKLDVFL +N  E  CDFRVKGSW ERSC +YAG
Sbjct:   103 QVFRGGSTDQRDLLYTVKRSSMLQLKTKLDVFLGHNKDEKRCDFRVKGSWLERSCVVYAG 162

Query:    61 ESSTIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEIN 109
             ES  I+AQMH+KHTVQS+ +GKDNF+VTVYPN+DYAFI +L+VILD++N
Sbjct:   163 ESDAIVAQMHRKHTVQSVFLGKDNFSVTVYPNVDYAFIASLVVILDDVN 211

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=IDA

GO:0006569 "tryptophan catabolic process" evidence=RCA

GO:0006995 "cellular response to nitrogen starvation" evidence=RCA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA

GO:0030003 "cellular cation homeostasis" evidence=RCA

GO:0070838 "divalent metal ion transport" evidence=RCA

TAIR|locus:2081481 AT3G11740 "AT3G11740" [Arabidopsis thaliana (taxid:3702)]

 Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
 Identities = 71/113 (62%), Positives = 92/113 (81%)

Query:     2 VFRGESTEPQDLIFSAKMSSMWNV-RTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAG 60
             V+RG+ST+  DL+++ K SSM  + + KLD+FLA+N +  +CDF VKGSW +RSC +YAG
Sbjct:    80 VYRGKSTDQSDLLYTLKRSSMIQIMKPKLDIFLAHNKEMKICDFHVKGSWIDRSCVVYAG 139

Query:    61 ESSTIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEINHASS 113
             +S  I+AQMHKKHT QSILIGK NF+VTVYPN+D+AFIV+LIVILD+IN   S
Sbjct:   140 KSDAIVAQMHKKHTAQSILIGKSNFSVTVYPNVDFAFIVSLIVILDDINREDS 192

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2055250 LURP1 "AT2G14560" [Arabidopsis thaliana (taxid:3702)]

 Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
 Identities = 63/111 (56%), Positives = 81/111 (72%)

Query:     1 QVFRGESTEPQDLIFSAKMSSMWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAG 60
             QVFRG STE   L+++ K SSM  +  KL+VFLANN +E +CDF+VKG+W + SC +YAG
Sbjct:    83 QVFRGGSTEEGALLYTVKRSSMIQLAPKLEVFLANNVEEKICDFKVKGAWLDDSCVVYAG 142

Query:    61 ESSTIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEINHA 111
             +S TIIA M  K T++    GKD+F+VTV  N+DYAFI +LIVIL EI  A
Sbjct:   143 DSDTIIAHMCGKQTMRGFFFGKDHFSVTVDKNVDYAFIASLIVILVEIEKA 193

GO:0003674 "molecular_function" evidence=ND

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0050832 "defense response to fungus" evidence=RCA;IMP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

TAIR|locus:2086062 AT3G16900 "AT3G16900" [Arabidopsis thaliana (taxid:3702)]

 Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
 Identities = 49/110 (44%), Positives = 71/110 (64%)

Query:     1 QVFRGESTEPQDLIFSAKMSSMWNVRTKLDVFLANN-TKEDVCDFRVKGSWFERSCTIYA 59
             QV+RG   +  D IF+ K SS   ++T+++VFL +N T+E  CDF +KG + +R+CTIY 
Sbjct:    82 QVYRGSDLD--DKIFTVKRSSTVQLKTRVEVFLKHNQTRESSCDFTIKGRFMKRACTIYV 139

Query:    60 GESSTIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEIN 109
              +S+ IIAQ+++ H         +    T+YPN+DYAFIV LI I D IN
Sbjct:   140 ADSTKIIAQVYEGH---------ERLVATIYPNVDYAFIVTLIFIFDLIN 180

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2078506 AT3G56180 "AT3G56180" [Arabidopsis thaliana (taxid:3702)]

 Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
 Identities = 42/110 (38%), Positives = 66/110 (60%)

Query:     1 QVFRGESTEPQDLIFSAKMSSMWNVRTKLDVFLA--NNTKE-DVCDFRVKGSWFERSCTI 57
             +V  GES E +DL+F+ + S   +++T +DVFL   NN K+ + CDF   G +   S  +
Sbjct:    94 EVHGGESKEREDLLFTVQQSQAVSLKTSVDVFLPENNNVKKTNTCDFHASGGYSNISFKV 153

Query:    58 YAGESSTIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDE 107
             +  ++  +IA +    T  S   GK NF V V P +DYAFI+AL+V++D+
Sbjct:   154 FKADA--LIAGVG--FTWGSFCKGKYNFKVRVNPEVDYAFIIALLVMVDD 199

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:4515103053 AT3G10986 "AT3G10986" [Arabidopsis thaliana (taxid:3702)]

 Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 36/115 (31%), Positives = 69/115 (60%)

Query:     1 QVFRGESTEPQDLIFSAKMSSMWNVRTKLDVFLA-NNTKEDVC----DFRVKGSWFERSC 55
             +V++G+STE  +L+FSA+  ++ + +T LDV L  + +  D+     DF+  G +   S 
Sbjct:    81 EVYKGDSTESDNLLFSAREPNLLSFKTSLDVTLPPDQSSTDISSVEPDFQTFGRYIGSSF 140

Query:    56 TIYAGESSTIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEINH 110
              ++    +T++A++    T   ++ G  +F V V P +D+AF+VAL+VI D+ ++
Sbjct:   141 KLFEPIHNTLLAEVVHDFTWGGLIKGSYSFKVRVNPYVDFAFVVALLVITDDTSN 195

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2093242 AT3G15810 "AT3G15810" [Arabidopsis thaliana (taxid:3702)]

 Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
 Identities = 35/107 (32%), Positives = 60/107 (56%)

Query:     3 FRGESTEPQDLIFSAKMSSMWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAGES 62
             F GE +E Q  IFS + SS+   R  ++V + + T E+   + + G + +RSC IY  + 
Sbjct:   100 FLGERSEGQKPIFSVRRSSIIG-RCTMEVEVYDGTGEE---YIIDGDFSQRSCLIYDTKK 155

Query:    63 STIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEIN 109
              T+     K     ++++G+D F + + P  D AF + L+V+LD+IN
Sbjct:   156 CTVAEIKRKVDASTNVMLGRDVFTLEIKPGFDGAFAMGLVVVLDQIN 202

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2065753 AT2G30270 "AT2G30270" [Arabidopsis thaliana (taxid:3702)]

 Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 31/105 (29%), Positives = 66/105 (62%)

Query:     1 QVFRGESTEPQDLIFSAKMSSMWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAG 60
             ++ +G+  + +DL+ + K +S    +T+ +V  A  + E++    +KG  F++SCTIY+ 
Sbjct:    79 ELHKGDVEKRKDLVLTVKRTSKRFSKTESEVSFAGESSENLV---IKGVPFQKSCTIYSQ 135

Query:    61 ESSTIIAQMHKKHTVQSILIGKDNFAVTVYP-NIDYAFIVALIVI 104
             +S  I+AQ    + ++ I +G+  F +T++P +ID++ +VA++ I
Sbjct:   136 DS--IVAQTSLMYKLRQIYVGRSKFRLTIFPGSIDHSLVVAMVAI 178

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2016299 AT1G80120 "AT1G80120" [Arabidopsis thaliana (taxid:3702)]

 Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
 Identities = 30/107 (28%), Positives = 62/107 (57%)

Query:     3 FRGESTEPQDLIFSAKMSSMWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAGES 62
             + GE ++ Q  IF  + SS+   R  + V +  + +    ++ ++GS+  R+CT+   E+
Sbjct:    87 YLGERSDGQKPIFGVRRSSIIG-RNSVTVEVYGDYQ--CSEYLIEGSFGARNCTVVEAET 143

Query:    63 STIIAQMHKKHTVQS-ILIGKDNFAVTVYPNIDYAFIVALIVILDEI 108
                +A++ +K    + +++GKD F++ V P  D AF + L+++LD+I
Sbjct:   144 RRKVAEIRRKVDASTNVMLGKDVFSLNVKPGFDGAFAMGLVLVLDQI 190

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2180459 AT5G20640 "AT5G20640" [Arabidopsis thaliana (taxid:3702)]

 Score = 111 (44.1 bits), Expect = 2.4e-06, P = 2.4e-06
 Identities = 27/68 (39%), Positives = 37/68 (54%)

Query:    46 VKGSWFERSCTIYAGESSTIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVIL 105
             +KGS+ ER+C I   +   I     +K   + +   KD + V V PN+D +FIV LI IL
Sbjct:   146 IKGSFAERACNIMDSDGKAIAKVRIEKEMEEMVGNKKDLYHVIVKPNVDQSFIVGLIAIL 205

Query:   106 DEINHASS 113
             D I H  S
Sbjct:   206 DYI-HGES 212

GO:0003674 "molecular_function" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00037442001 SubName- Full=Chromosome chr8 scaffold_88, whole genome shotgun sequence; (216 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	113
pfam04525	185	pfam04525, Tub_2, Tubby C 2	2e-28

>gnl|CDD|218129 pfam04525, Tub_2, Tubby C 2

 Score =  101 bits (253), Expect = 2e-28
 Identities = 46/109 (42%), Positives = 72/109 (66%), Gaps = 7/109 (6%)

Query: 1   QVFRGESTEPQDLIFSAKMSSMWNVRTKLDVFLANNT-----KEDVCDFRVKGSWFERSC 55
           +V+RGE TE +D +F+ + SS+  ++T   VF   N+      E  CDF +KGS+ +RSC
Sbjct: 79  EVYRGEGTEGKDPLFTVRRSSIVQLKTSSSVFSKRNSNVIVDDEKNCDFDIKGSFLDRSC 138

Query: 56  TIYAGESSTIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVI 104
            IY  +S  +IA++ K+ T + + +GKD + VTV P +DYAFI+AL+V+
Sbjct: 139 KIYD-DSDKLIAEV-KRQTSKGVFLGKDVYTVTVKPEVDYAFIMALVVV 185

The structure of this family has been solved. It comprises a 12-stranded beta barrel with a central C-terminal alpha helix. This helix is thought to be a transmembrane helix. It is structurally similar to the C-terminal domain of the Tubby protein. In plants it plays a role in defense against pathogens. Length = 185

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	113
PF04525	187	Tub_2: Tubby C 2; InterPro: IPR007612 This is a fa	99.92
COG4894	159	Uncharacterized conserved protein [Function unknow	99.63
PF03803	221	Scramblase: Scramblase ; InterPro: IPR005552 Scram	98.63
PF04525	187	Tub_2: Tubby C 2; InterPro: IPR007612 This is a fa	95.87
KOG0621	292	consensus Phospholipid scramblase [Cell wall/membr	93.72
COG4894	159	Uncharacterized conserved protein [Function unknow	91.16

>PF04525 Tub_2: Tubby C 2; InterPro: IPR007612 This is a family of plant and bacterial uncharacterised proteins

Probab=99.92  E-value=4e-25  Score=160.76  Aligned_cols=103  Identities=34%  Similarity=0.669  Sum_probs=60.6

Q ss_pred             CeeecCCCCCCCeEEEEEecccCCccceEEEEEcCCC-----CCceeeEEEEeeecCceeEEEeCCCCcEEEEEeeeeee
Q 039929            1 QVFRGESTEPQDLIFSAKMSSMWNVRTKLDVFLANNT-----KEDVCDFRVKGSWFERSCTIYAGESSTIIAQMHKKHTV   75 (113)
Q Consensus         1 ~~~~g~~~~~~~~lf~vk~~~~~~~k~~~~V~~~~~~-----~~~~~~~~i~G~~~~~~~~I~~~~~g~~VAev~rk~~~   75 (113)
                      ++|+|++.+.++|+|++|+++.+..++++.+|+.+..     .++.++|+|+|+|++++|+|++. .|++||||+||+..
T Consensus        80 ~i~~~~~~~~~~~i~tvkk~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~i~G~~~~~~~~I~~~-~g~~VA~i~rk~~~  158 (187)
T PF04525_consen   80 EIYRGGGSEGKKPIFTVKKKSMLQNKDSFDVFLPPKSNISIDDSEGPDFEIKGNFWDRSFTIYDS-GGRVVAEISRKYSS  158 (187)
T ss_dssp             EEEETT---GGGEEEEEE----------EEEEET--T----------SEEEES-TTTT--EEEEC-C--EEEEEEE----
T ss_pred             EEEECCCCccCceEEEEEEecccCCCcceeEEEecccceeecCCCCceEEEEEEecCcEEEEEEc-CCCEEEEEecccce
Confidence            4688887777899999999887778889999987542     34678999999999999999974 49999999999988


Q ss_pred             eeEeeeccEEEEEEeCCCCHHHHHHHHHh
Q 039929           76 QSILIGKDNFAVTVYPNIDYAFIVALIVI  104 (113)
Q Consensus        76 ~~~~~g~d~y~l~V~pg~D~ali~alvv~  104 (113)
                      +++++|+|+|.|+|+||+|++|+||||||
T Consensus       159 k~~~~~~dty~l~V~pg~D~~lv~alvvi  187 (187)
T PF04525_consen  159 KKWFSGRDTYTLTVAPGVDQALVVALVVI  187 (187)
T ss_dssp             ------B-SEEEEE-TTSBHHHHHHHHHH
T ss_pred             eeEEecCcEEEEEEcCCCCHHHheeEEeC
Confidence            89999999999999999999999999986

; PDB: 1ZXU_A 2Q4M_A.

>COG4894 Uncharacterized conserved protein [Function unknown]

Probab=99.63  E-value=1.2e-15  Score=107.47  Aligned_cols=61  Identities=23%  Similarity=0.445  Sum_probs=58.1

Q ss_pred             eEEEEeeecCceeEEEeCCCCcEEEEEeeeeeeeeEeeeccEEEEEEeCCCCHHHHHHHHHhhccccc
Q 039929           43 DFRVKGSWFERSCTIYAGESSTIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEINH  110 (113)
Q Consensus        43 ~~~i~G~~~~~~~~I~~~~~g~~VAev~rk~~~~~~~~g~d~y~l~V~pg~D~ali~alvv~lD~~~~  110 (113)
                      +++++||+|+.+|++.++  ++++|+|+|||     +.|+|||.|+|+|+.|.++|++++||+|++..
T Consensus        98 ~~eihGNi~d~efkl~dg--~~~~aeVsKkw-----f~~rdTY~l~vapde~a~lii~i~VaLD~v~~  158 (159)
T COG4894          98 NWEIHGNIWDDEFKLTDG--ENVRAEVSKKW-----FSWRDTYHLQVAPDEDALLIIAIAVALDMVLY  158 (159)
T ss_pred             CeEEecceeceEEEEecC--Cceehhheeee-----EeccceEEEEEcCchhhHHHHHHHHHHHHHhc
Confidence            499999999999999999  78999999999     88999999999999999999999999999864

>PF03803 Scramblase: Scramblase ; InterPro: IPR005552 Scramblase is palmitoylated and contains a potential protein kinase C phosphorylation site

Probab=98.63  E-value=5.9e-07  Score=66.44  Aligned_cols=96  Identities=23%  Similarity=0.376  Sum_probs=71.8

Q ss_pred             CCCeEEEEEecccCCccceEEEEEcCCCCCceeeEEEEee------ecCceeEEEeCCCCcEEEEEeeeee--eeeEeee
Q 039929           10 PQDLIFSAKMSSMWNVRTKLDVFLANNTKEDVCDFRVKGS------WFERSCTIYAGESSTIIAQMHKKHT--VQSILIG   81 (113)
Q Consensus        10 ~~~~lf~vk~~~~~~~k~~~~V~~~~~~~~~~~~~~i~G~------~~~~~~~I~~~~~g~~VAev~rk~~--~~~~~~g   81 (113)
                      .++++-+|+++.. ..++.++|+-+.+    ..-+.|+|.      +.++.|.|++.+ |+.||+|+|+|+  .++.+..
T Consensus       114 ~g~~iG~I~q~~~-~~~~~f~I~d~~~----~~~~~I~gp~~~~~~~~~~~F~I~~~~-~~~vg~I~k~w~G~~~e~~t~  187 (221)
T PF03803_consen  114 PGNLIGSIRQPFS-CCRPNFDIFDANG----NPIFTIKGPCCCCSCCCDWEFEIKDPN-GQEVGSITKKWSGFCRELFTD  187 (221)
T ss_pred             CCcEEEEEEEcCc-ccceEEEEEECCC----ceEEEEeCCcceeccccceeeeeeccc-CcEEEEEEEecCCcchhhccc
Confidence            4556666665432 2355666654443    356888887      457889999974 799999999995  4567888


Q ss_pred             ccEEEEEEeCCCC---HHHHHHHHHhhcccccc
Q 039929           82 KDNFAVTVYPNID---YAFIVALIVILDEINHA  111 (113)
Q Consensus        82 ~d~y~l~V~pg~D---~ali~alvv~lD~~~~~  111 (113)
                      .|.|.|+..|..|   -|+++|.++.+|.++=|
T Consensus       188 ~d~f~i~Fp~~l~~~~Kalll~a~~liD~~~Fe  220 (221)
T PF03803_consen  188 ADNFVIEFPPDLDVEQKALLLGAAFLIDYMYFE  220 (221)
T ss_pred             cceEEEEcCCCCCHHHHHHHHHHHHHhhhhhhc
Confidence            9999999999886   57899999999988644

Scramblase exhibits Ca2+-activated phospholipid scrambling activity in vitro. There are also possible SH3 and WW binding motifs. Scramblase is involved in the redistribution of phospholipids after cell activation or injury [].

>PF04525 Tub_2: Tubby C 2; InterPro: IPR007612 This is a family of plant and bacterial uncharacterised proteins

Probab=95.87  E-value=0.089  Score=38.00  Aligned_cols=58  Identities=22%  Similarity=0.332  Sum_probs=30.5

Q ss_pred             CCeEEEEEecccCCccceEEEEEcCCCCCceeeEEEEe-eec--CceeEEEeCCCCcEEEEEeeee
Q 039929           11 QDLIFSAKMSSMWNVRTKLDVFLANNTKEDVCDFRVKG-SWF--ERSCTIYAGESSTIIAQMHKKH   73 (113)
Q Consensus        11 ~~~lf~vk~~~~~~~k~~~~V~~~~~~~~~~~~~~i~G-~~~--~~~~~I~~~~~g~~VAev~rk~   73 (113)
                      ....++|++..+.+.+..+.|+=..+    ..-|+|+| .++  .+...|.|. +|++++.|++|.
T Consensus        12 ~~~~l~v~~k~~~~~~~~f~V~D~~G----~~vf~V~g~~~~s~~~~~~l~D~-~G~~L~~i~~k~   72 (187)
T PF04525_consen   12 QPVTLTVKKKSLSFSGDDFTVYDENG----NVVFRVDGGKFFSIGKKRTLMDA-SGNPLFTIRRKL   72 (187)
T ss_dssp             S-EEEEEE----------EEEEETTS-----EEEEEE--SCTTBTTEEEEE-T-TS-EEEEEE---
T ss_pred             CceEEEEEEEEeeecCCCEEEEcCCC----CEEEEEEEecccCCCCEEEEECC-CCCEEEEEEeee
Confidence            34568887776655567888875543    47899999 554  567888888 599999999974

; PDB: 1ZXU_A 2Q4M_A.

>KOG0621 consensus Phospholipid scramblase [Cell wall/membrane/envelope biogenesis]

Probab=93.72  E-value=0.24  Score=38.91  Aligned_cols=70  Identities=17%  Similarity=0.289  Sum_probs=51.9

Q ss_pred             eeEEEEee-------ecCceeEEEeCCCCcEEEEEeeeee--eeeEeeeccEEEEEEeCCCC---HHHHHHHHHhhcccc
Q 039929           42 CDFRVKGS-------WFERSCTIYAGESSTIIAQMHKKHT--VQSILIGKDNFAVTVYPNID---YAFIVALIVILDEIN  109 (113)
Q Consensus        42 ~~~~i~G~-------~~~~~~~I~~~~~g~~VAev~rk~~--~~~~~~g~d~y~l~V~pg~D---~ali~alvv~lD~~~  109 (113)
                      ..+.|+|.       +.+..+.|...+.|+.|++|.|+|.  .++.+...|+|.|.-....|   -++++|-++.+|.+.
T Consensus       199 ~v~~v~gp~~~~~~~~~d~~f~~~~~d~~~~vg~I~k~w~g~~rE~fTDad~f~v~FPldLdvk~kavllga~flID~~~  278 (292)
T KOG0621|consen  199 LVFLVEGPRCCTFACCDDTVFFPKTTDNGRIVGSISRKWAGLVREAFTDADTFVVHFPLDLDVKLKALLLGSTFLIDYMS  278 (292)
T ss_pred             eEEEEEcCceeEEEeecCcceeEEEcCCCeEEEEEeecccchhhhheeccceeeEecCCcCCHHHHhhhhhheeeEEEEE
Confidence            34666666       2334455555556999999999995  66889999999998876666   467888888888776


Q ss_pred             cc
Q 039929          110 HA  111 (113)
Q Consensus       110 ~~  111 (113)
                      -|
T Consensus       279 Fe  280 (292)
T KOG0621|consen  279 FE  280 (292)
T ss_pred             Ee
Confidence            54

>COG4894 Uncharacterized conserved protein [Function unknown]

Probab=91.16  E-value=0.18  Score=36.09  Aligned_cols=17  Identities=29%  Similarity=0.669  Sum_probs=9.5

Q ss_pred             EEEEeeeeeeeeEeeeccEEEE
Q 039929           66 IAQMHKKHTVQSILIGKDNFAV   87 (113)
Q Consensus        66 VAev~rk~~~~~~~~g~d~y~l   87 (113)
                      +++|++|.+     .++|.|.+
T Consensus        78 ~~~vrKK~t-----f~Rdk~e~   94 (159)
T COG4894          78 VCEVRKKVT-----FSRDKFEI   94 (159)
T ss_pred             EEEEEEEEE-----EEeeeEEE
Confidence            566666653     23666654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	113
1zxu_A	217	X-Ray Structure Of Protein From Arabidopsis Thalian		7e-42

>pdb|1ZXU|A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At5g01750 Length = 217

Iteration: 1
 Score =  165 bits (417), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 71/110 (64%), Positives = 90/110 (81%)
Query: 1   QVFRGESTEPQDLIFSAKMSSMWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAG 60
           QVFRG ST+ +DL+++ K SS   ++TKLDVFL +N  E  CDFRVKGSW ERSC +YAG
Sbjct: 103 QVFRGGSTDQRDLLYTVKRSSXLQLKTKLDVFLGHNKDEKRCDFRVKGSWLERSCVVYAG 162
Query: 61  ESSTIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEINH 110
           ES  I+AQ H+KHTVQS+ +GKDNF+VTVYPN+DYAFI +L+VILD++N 
Sbjct: 163 ESDAIVAQXHRKHTVQSVFLGKDNFSVTVYPNVDYAFIASLVVILDDVNR 212

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	113
1zxu_A	217	AT5G01750 protein; PFAM PF01167, TULP, structural	2e-39

>1zxu_A AT5G01750 protein; PFAM PF01167, TULP, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 1.70A {Arabidopsis thaliana} SCOP: d.23.1.2 PDB: 2q4m_A Length = 217

 Score =  129 bits (326), Expect = 2e-39
 Identities = 73/110 (66%), Positives = 92/110 (83%)

Query: 1   QVFRGESTEPQDLIFSAKMSSMWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAG 60
           QVFRG ST+ +DL+++ K SSM  ++TKLDVFL +N  E  CDFRVKGSW ERSC +YAG
Sbjct: 103 QVFRGGSTDQRDLLYTVKRSSMLQLKTKLDVFLGHNKDEKRCDFRVKGSWLERSCVVYAG 162

Query: 61  ESSTIIAQMHKKHTVQSILIGKDNFAVTVYPNIDYAFIVALIVILDEINH 110
           ES  I+AQMH+KHTVQS+ +GKDNF+VTVYPN+DYAFI +L+VILD++N 
Sbjct: 163 ESDAIVAQMHRKHTVQSVFLGKDNFSVTVYPNVDYAFIASLVVILDDVNR 212

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	113
1zxu_A	217	AT5G01750 protein; PFAM PF01167, TULP, structural	99.93
1zxu_A	217	AT5G01750 protein; PFAM PF01167, TULP, structural	94.82

>1zxu_A AT5G01750 protein; PFAM PF01167, TULP, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 1.70A {Arabidopsis thaliana} SCOP: d.23.1.2 PDB: 2q4m_A

Probab=99.93  E-value=1.7e-25  Score=164.76  Aligned_cols=112  Identities=65%  Similarity=1.137  Sum_probs=84.7

Q ss_pred             CeeecCCCCCCCeEEEEEecccCCccceEEEEEcCCCCCceeeEEEEeeecCceeEEEeCCCCcEEEEEeeeeeeeeEee
Q 039929            1 QVFRGESTEPQDLIFSAKMSSMWNVRTKLDVFLANNTKEDVCDFRVKGSWFERSCTIYAGESSTIIAQMHKKHTVQSILI   80 (113)
Q Consensus         1 ~~~~g~~~~~~~~lf~vk~~~~~~~k~~~~V~~~~~~~~~~~~~~i~G~~~~~~~~I~~~~~g~~VAev~rk~~~~~~~~   80 (113)
                      ++|++++.++++|+|++|+++++..+++++|+++++++++.+.|+|+|+|++++|+|+++++|++||+|+|||+++++++
T Consensus       103 ~v~~~~~~~~~~~i~~vrk~~~~~~~~~~~V~~~~~~~~~~~~~~I~G~~~~~~f~I~~~~~~~~Va~I~kk~~~~~~~~  182 (217)
T 1zxu_A          103 QVFRGGSTDQRDLLYTVKRSSMLQLKTKLDVFLGHNKDEKRCDFRVKGSWLERSCVVYAGESDAIVAQMHRKHTVQSVFL  182 (217)
T ss_dssp             EEEETTCCCGGGEEEEEEC-------CCEEEEETTCCC-CCCSEEEESCTTTTCCEEEETTTCCEEEEEEEC--------
T ss_pred             EEEcCCCCCCCcEEEEEEEeccccCCCeEEEEECCCCCCCceEEEEEEeEeCCEEEEEECCCCEEEEEEEeeeecccccc
Confidence            36788766556899999988644468899999987655556899999999999999999855799999999999999999


Q ss_pred             eccEEEEEEeCCCCHHHHHHHHHhhccccccC
Q 039929           81 GKDNFAVTVYPNIDYAFIVALIVILDEINHAS  112 (113)
Q Consensus        81 g~d~y~l~V~pg~D~ali~alvv~lD~~~~~~  112 (113)
                      |+|+|.|+|.|++|++|+||+|+++|+|+.++
T Consensus       183 ~~D~y~l~V~p~~D~aliialvv~iD~~~~~~  214 (217)
T 1zxu_A          183 GKDNFSVTVYPNVDYAFIASLVVILDDVNRED  214 (217)
T ss_dssp             CBCSEEEEECTTSBHHHHHHHHHHHHHHHC--
T ss_pred             CCcEEEEEECCCCCHHHHHHHHHHHHHhhhhc
Confidence            99999999999999999999999999998875

>1zxu_A AT5G01750 protein; PFAM PF01167, TULP, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 1.70A {Arabidopsis thaliana} SCOP: d.23.1.2 PDB: 2q4m_A

Probab=94.82  E-value=0.26  Score=35.28  Aligned_cols=58  Identities=17%  Similarity=0.130  Sum_probs=37.2

Q ss_pred             CCeEEEEEecccCCccceEEEEEcCCCCCceeeEEEEeeecC--ceeEEEeCCCCcEEEEEeeee
Q 039929           11 QDLIFSAKMSSMWNVRTKLDVFLANNTKEDVCDFRVKGSWFE--RSCTIYAGESSTIIAQMHKKH   73 (113)
Q Consensus        11 ~~~lf~vk~~~~~~~k~~~~V~~~~~~~~~~~~~~i~G~~~~--~~~~I~~~~~g~~VAev~rk~   73 (113)
                      ....++||++.+.+....++|+-..+    ..-|.++|.++.  ..+.|+|. +|+.+.+|+||.
T Consensus        36 ~~~~l~vkqk~~~~~~~~f~V~D~~G----~~vf~V~~~~~~~~~~~~l~D~-~G~~l~~i~rk~   95 (217)
T 1zxu_A           36 YPIDMAIVRKMMSLTDGNFVITDVNG----NLLFKVKEPVFGLHDKRVLLDG-SGTPVVTLREKM   95 (217)
T ss_dssp             SCEEEEEECC-----CCCEEEEETTS----CEEEEEECSSTTCCSEEEEECT-TSCEEEEEEC--
T ss_pred             CCcEEEEEEEEeEeeCCCEEEEeCCC----CEEEEEEccccCCCCEEEEECC-CCCEEEEEEccc
Confidence            45678898775544344888875432    367999998654  45667777 489999999984

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	113
d2q4ma1	189	d.23.1.2 (A:24-212) Hypothetical protein At5g01750	1e-36

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	113
d2q4ma1	189	Hypothetical protein At5g01750 {Thale cress (Arabi	99.96
d2q4ma1	189	Hypothetical protein At5g01750 {Thale cress (Arabi	96.51