Citrus Sinensis ID: 039950

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-

RLYHIDASSISRLQQLASVKGKKRTKVEAFSAYIWKIMVTSIDEKHGKCKMGWLVDGRCRILKHENPMSSYIGNVLSLAVGEASVTELKQGSISEIANRVHDSITKVTNEAHFLDLIDWIECHRPGLMLARVVLGRDGPTVVVSSGRRFPVAELDFGFGNPVLGAVSSIIERSGVGYINQRPSATCDGSWTVSAILWPELATALESDSIFQPMSAADHLQL

cEEEEcHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccccccccEEEEEEEEccccccccccccccccccEEEcEEccccHHHHHcccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHccccccHHHHccccccccEEEEccccccccccccccccccccccccccccccEEEEEEcccccccccEEEEEEccHHHHHHHHcccccccccccHHccc

cEEEEcHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHccccccccEEEEEEcccccccccccccccccccEEEEcccHccHHHHHHccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccccHHHHHHccccccccEEEEcccccccccccccccccEEccccccccccccEEEEEcccccccccEEEEEEccHHHHHHHHcccccccccHHHHHcc

rlyhidasSISRLQQLASvkgkkrtkvEAFSAYIWKIMVTSIDekhgkckmgwlvdgrcrilkhenpmssYIGNVLSLAVGEASVTELKQGSISEIANRVHDSITKVTNEAHFLDLIDWIECHRPGLMLARVVlgrdgptvvvssgrrfpvaeldfgfgnpvlgAVSSIIErsgvgyinqrpsatcdgswtvsAILWPELATalesdsifqpmsaadhlql

rlyhidassisrlqqlasvkgkkrtkveafSAYIWKIMVTSIDEKHGKCKMGWLVDGRCRILKHENPMSSYIGNVLSLAVGEASVTELKQGSISEIANRVHDSITKVTNEAHFLDLIDWIECHRPGLMLARVVLGRDGPTVVVSSGRRFPVAELDFGFGNPVLGAVSSIIERSGVGYINQRPSATCDGSWTVSAILWPELATALESDSIFQPMSAADHLQL

************************TKVEAFSAYIWKIMVTSIDEKHGKCKMGWLVDGRCRILKHENPMSSYIGNVLSLAVGEASVTELKQGSISEIANRVHDSITKVTNEAHFLDLIDWIECHRPGLMLARVVLGRDGPTVVVSSGRRFPVAELDFGFGNPVLGAVSSIIERSGVGYINQRPSATCDGSWTVSAILWPELATALE****************

RLYHIDASSISRLQQ********RTKVEAFSAYIWKIMVTSIDEKHGKCKMGWLVDGRCRILKHENPMSSYIGNVLSLAVGEASVTELKQGSISEIANRVHDSITKVTNEAHFLDLIDWIECHRPGLMLARVVLGRDGPTVVVSSGRRFPVAELDFGFGNPVLGAVSSIIERSGVGYINQRPSATCDGSWTVSAILWPELATALESDSIFQPMSAADHLQL

RLYHIDASSISRLQQ**********KVEAFSAYIWKIMVTSIDEKHGKCKMGWLVDGRCRILKHENPMSSYIGNVLSLAVGEASVTELKQGSISEIANRVHDSITKVTNEAHFLDLIDWIECHRPGLMLARVVLGRDGPTVVVSSGRRFPVAELDFGFGNPVLGAVSSIIERSGVGYINQRPSATCDGSWTVSAILWPELATALESDSIFQPMSAADHLQL

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		221	2.2.26 [Sep-21-2011]
O24645		445	Anthranilate N-benzoyltra	N/A	no	0.859	0.426	0.278	1e-09
O23917		446	Anthranilate N-benzoyltra	N/A	no	0.859	0.426	0.277	1e-09
O23918		445	Anthranilate N-benzoyltra	N/A	no	0.859	0.426	0.278	2e-09
Q8GSM7		435	Shikimate O-hydroxycinnam	N/A	no	0.837	0.425	0.24	6e-08
Q9FI78		433	Shikimate O-hydroxycinnam	no	no	0.823	0.420	0.239	6e-07
Q94CD1		457	Omega-hydroxypalmitate O-	no	no	0.728	0.352	0.269	1e-05
Q9SND9		443	Uncharacterized acetyltra	no	no	0.669	0.334	0.265	0.0005

>sp\|O24645\|HCBT1_DIACA Anthranilate N-benzoyltransferase protein 1 OS=Dianthus caryophyllus GN=HCBT1 PE=1 SV=1	Back alignment and function desciption

 Score = 63.5 bits (153), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 11/201 (5%)

Query: 2   LYHIDASSISRLQQLASVKGK--KRTKVEAFSAYIWKIMVTSID-EKHGKCKMGWLVDGR 58
           L+ +    I+ L+Q   +     + +  E  +A++W+ +  +     H + K+   VDGR
Sbjct: 237 LFILSREQINTLKQKLDLSNNTTRLSTYEVVAAHVWRSVSKARGLSDHEEIKLIMPVDGR 296

Query: 59  CRILKHENPMSSYIGNVLSLAVGEASVTELKQGSISEIANRVHDSITKVTNEAHFLDLID 118
            RI     P   Y GNV+ LAV  A+V +L    +++ A +V +++ K  ++ +    ID
Sbjct: 297 SRINNPSLP-KGYCGNVVFLAVCTATVGDLSCNPLTDTAGKVQEAL-KGLDDDYLRSAID 354

Query: 119 WIECHRPGLMLARVVLGRDG--PTVVVSSGRRFPVAELDFGFGNPVLGAVSSIIERSGVG 176
             E  +PGL +  +        P V+V+S  R P   +DFG+G+P    +S+I       
Sbjct: 355 HTES-KPGLPVPYMGSPEKTLYPNVLVNSWGRIPYQAMDFGWGSPTFFGISNIFYDGQCF 413

Query: 177 YINQRPSATCDGSWTVSAILW 197
            I   PS   DGS T++  L+
Sbjct: 414 LI---PSRDGDGSMTLAINLF 431

Catalyzes the formation of N-benzoylanthranilate, in the course of methoxydianthramide B, a phytoalexin. Phytoalexins are produced in response to infection by parasites, and are essential for the expression of disease resistance.
Dianthus caryophyllus (taxid: 3570)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 1EC: 4EC: 4

>sp\|O23917\|HCBT2_DIACA Anthranilate N-benzoyltransferase protein 2 OS=Dianthus caryophyllus GN=HCBT2 PE=1 SV=1	Back alignment and function description

>sp\|O23918\|HCBT3_DIACA Anthranilate N-benzoyltransferase protein 3 OS=Dianthus caryophyllus GN=HCBT3 PE=1 SV=1	Back alignment and function description

>sp\|Q8GSM7\|HST_TOBAC Shikimate O-hydroxycinnamoyltransferase OS=Nicotiana tabacum GN=HST PE=1 SV=1	Back alignment and function description

>sp\|Q9FI78\|HST_ARATH Shikimate O-hydroxycinnamoyltransferase OS=Arabidopsis thaliana GN=HST PE=2 SV=1	Back alignment and function description

>sp\|Q94CD1\|HHT1_ARATH Omega-hydroxypalmitate O-feruloyl transferase OS=Arabidopsis thaliana GN=HHT1 PE=1 SV=1	Back alignment and function description

>sp\|Q9SND9\|Y3028_ARATH Uncharacterized acetyltransferase At3g50280 OS=Arabidopsis thaliana GN=At3g50280 PE=1 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		221
224139154		448	predicted protein [Populus trichocarpa]	0.977	0.482	0.777	5e-97
255557745		392	transferase, putative [Ricinus communis]	0.995	0.561	0.746	3e-93
225427663		450	PREDICTED: omega-hydroxypalmitate O-feru	0.995	0.488	0.751	2e-92
147769499		450	hypothetical protein VITISV_042905 [Viti	0.995	0.488	0.751	4e-92
255636507		454	unknown [Glycine max]	0.995	0.484	0.705	8e-89
356500533		454	PREDICTED: anthranilate N-benzoyltransfe	0.995	0.484	0.705	8e-89
297846520		444	transferase family protein [Arabidopsis	0.981	0.488	0.728	2e-88
15222365		444	HXXXD-type acyl-transferase-like protein	0.981	0.488	0.714	8e-87
357484525		458	Omega-hydroxypalmitate O-feruloyl transf	0.995	0.480	0.681	1e-83
449462541		453	PREDICTED: anthranilate N-benzoyltransfe	0.977	0.476	0.675	8e-83

>gi\|224139154\|ref\|XP_002326781.1\| predicted protein [Populus trichocarpa] gi\|222834103\|gb\|EEE72580.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score =  359 bits (921), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 168/216 (77%), Positives = 191/216 (88%)

Query: 1   RLYHIDASSISRLQQLASVKGKKRTKVEAFSAYIWKIMVTSIDEKHGKCKMGWLVDGRCR 60
           RLYHID SSI+RLQQLA   G KRTK+EAFSAY+WKIMVT+IDE+H KCKMGWLVDGR R
Sbjct: 229 RLYHIDVSSINRLQQLACASGNKRTKIEAFSAYVWKIMVTAIDERHQKCKMGWLVDGRGR 288

Query: 61  ILKHENPMSSYIGNVLSLAVGEASVTELKQGSISEIANRVHDSITKVTNEAHFLDLIDWI 120
           +   +N MS+YIGNVLS+AV EA++ ELKQGSIS+IA+ VHDSI+KVTNEAHFLDLIDWI
Sbjct: 289 VHGAQNLMSNYIGNVLSVAVAEATIAELKQGSISDIASNVHDSISKVTNEAHFLDLIDWI 348

Query: 121 ECHRPGLMLARVVLGRDGPTVVVSSGRRFPVAELDFGFGNPVLGAVSSIIERSGVGYINQ 180
           ECHRPGLML+ +VLGR GP +V+SSGRRFPVAELDFGFG PVLG V + +E+ GVGY+NQ
Sbjct: 349 ECHRPGLMLSSIVLGRGGPALVLSSGRRFPVAELDFGFGGPVLGTVCTTVEKIGVGYMNQ 408

Query: 181 RPSATCDGSWTVSAILWPELATALESDSIFQPMSAA 216
           RPSA  DGSWTVSAILWPELA ALESDSIFQPMSA+
Sbjct: 409 RPSARNDGSWTVSAILWPELAAALESDSIFQPMSAS 444

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|255557745\|ref\|XP_002519902.1\| transferase, putative [Ricinus communis] gi\|223540948\|gb\|EEF42506.1\| transferase, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|225427663\|ref\|XP_002274239.1\| PREDICTED: omega-hydroxypalmitate O-feruloyl transferase [Vitis vinifera]	Back alignment and taxonomy information

>gi\|147769499\|emb\|CAN76941.1\| hypothetical protein VITISV_042905 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|255636507\|gb\|ACU18592.1\| unknown [Glycine max]	Back alignment and taxonomy information

>gi\|356500533\|ref\|XP_003519086.1\| PREDICTED: anthranilate N-benzoyltransferase protein 1-like [Glycine max]	Back alignment and taxonomy information

>gi\|297846520\|ref\|XP_002891141.1\| transferase family protein [Arabidopsis lyrata subsp. lyrata] gi\|297336983\|gb\|EFH67400.1\| transferase family protein [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|15222365\|ref\|NP_174434.1\| HXXXD-type acyl-transferase-like protein [Arabidopsis thaliana] gi\|12322545\|gb\|AAG51274.1\|AC027135_15 N-hydroxycinnamoyl/benzoyltransferase, putative [Arabidopsis thaliana] gi\|12597836\|gb\|AAG60146.1\|AC074360_11 hypothetical protein [Arabidopsis thaliana] gi\|332193240\|gb\|AEE31361.1\| HXXXD-type acyl-transferase-like protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|357484525\|ref\|XP_003612550.1\| Omega-hydroxypalmitate O-feruloyl transferase [Medicago truncatula] gi\|355513885\|gb\|AES95508.1\| Omega-hydroxypalmitate O-feruloyl transferase [Medicago truncatula]	Back alignment and taxonomy information

>gi\|449462541\|ref\|XP_004148999.1\| PREDICTED: anthranilate N-benzoyltransferase protein 1-like [Cucumis sativus]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		221
TAIR\|locus:2028626		444	AT1G31490 [Arabidopsis thalian	0.981	0.488	0.714	1.4e-80
TAIR\|locus:2207410		455	AT1G78990 [Arabidopsis thalian	0.981	0.476	0.379	2.3e-32
TAIR\|locus:2037965		464	AT1G32910 [Arabidopsis thalian	0.855	0.407	0.416	2.9e-32
TAIR\|locus:2171337		480	AT5G16410 [Arabidopsis thalian	0.972	0.447	0.357	1.6e-31
TAIR\|locus:2074775		450	AT3G50270 [Arabidopsis thalian	0.891	0.437	0.264	1.2e-08
TAIR\|locus:2142798		456	AT5G07850 [Arabidopsis thalian	0.895	0.434	0.266	2.7e-07
TAIR\|locus:2176672		462	AT5G38130 [Arabidopsis thalian	0.909	0.435	0.245	3.6e-07
TAIR\|locus:2154334		433	HCT "hydroxycinnamoyl-CoA shik	0.814	0.415	0.260	4.2e-06
TAIR\|locus:2142813		454	AT5G07860 [Arabidopsis thalian	0.904	0.440	0.242	4.5e-06
TAIR\|locus:2174423		443	AT5G57840 [Arabidopsis thalian	0.787	0.392	0.277	7.6e-06

TAIR\|locus:2028626 AT1G31490 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 809 (289.8 bits), Expect = 1.4e-80, P = 1.4e-80
 Identities = 158/221 (71%), Positives = 182/221 (82%)

Query:     1 RLYHIDASSISRLQQLASVKGKKRTKVEAFSAYIWKIMVTSIDEKHGKCKMGWLVDGRCR 60
             RLYHI ASS+  LQ LA+V G+ RTK+EAFSAY+WK MV SI+  H  CKMGWLVDGR R
Sbjct:   226 RLYHIGASSLDALQALATVNGESRTKIEAFSAYVWKKMVDSIESGHKTCKMGWLVDGRGR 285

Query:    61 ILKHENPMSSYIGNVLSLAVGEASVTELKQGSISEIANRVHDSITKVTNEAHFLDLIDWI 120
             +   E   SSYIGNVLS+AVGEAS+  LK+  +S+IAN VH SIT+VTN+ HF DLIDWI
Sbjct:   286 L---ETVTSSYIGNVLSIAVGEASIENLKKNHVSDIANIVHKSITEVTNDTHFTDLIDWI 342

Query:   121 ECHRPGLMLARVVLGRDGPTVVVSSGRRFPVAELDFGFGNPVLGAVSSIIERSGVGYINQ 180
             E HRPGLMLARVVLG++GP +V+SSGRRFPVAELDFGFG P LG V S +E+ GVGY+NQ
Sbjct:   343 ESHRPGLMLARVVLGQEGPALVLSSGRRFPVAELDFGFGAPFLGTVCSTVEKIGVGYLNQ 402

Query:   181 RPSATCDGSWTVSAILWPELATALESDSIFQPMSAADHLQL 221
             RPSA  DGSW+VSAI+WPELATALESDS+FQPMSA  HLQL
Sbjct:   403 RPSACNDGSWSVSAIVWPELATALESDSVFQPMSAK-HLQL 442

GO:0005507 "copper ion binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008131 "primary amine oxidase activity" evidence=IEA

GO:0009308 "amine metabolic process" evidence=IEA

GO:0016740 "transferase activity" evidence=ISS

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0048038 "quinone binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

TAIR\|locus:2207410 AT1G78990 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2037965 AT1G32910 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2171337 AT5G16410 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2074775 AT3G50270 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2142798 AT5G07850 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2176672 AT5G38130 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2154334 HCT "hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2142813 AT5G07860 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2174423 AT5G57840 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	fgenesh4_pg.C_scaffold_29000346	hypothetical protein (448 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		221
pfam02458		432	pfam02458, Transferase, Transferase family	6e-25
PLN02481		436	PLN02481, PLN02481, Omega-hydroxypalmitate O-ferul	2e-09
PLN02663		431	PLN02663, PLN02663, hydroxycinnamoyl-CoA:shikimate	7e-08
PLN00140		444	PLN00140, PLN00140, alcohol acetyltransferase fami	1e-05
PLN03157		447	PLN03157, PLN03157, spermidine hydroxycinnamoyl tr	0.002

>gnl\|CDD\|217048 pfam02458, Transferase, Transferase family	Back alignment and domain information

 Score =  100 bits (252), Expect = 6e-25
 Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 10/209 (4%)

Query: 2   LYHIDASSISRLQQLASVK--GKKRTKVEAFSAYIWKIMVTSID-EKHGKCKMGWLVDGR 58
              +  S++ +L+  A+    GK RT+ E  +A +W+    +   +   +  +G  V+ R
Sbjct: 227 FEKLSISALEKLKTKANSSSNGKPRTRFEVVTALLWRCATKARKLDPEEETVLGQAVNIR 286

Query: 59  CRILKHENPMSSYIGNVLSLAVGEASVTELKQGSISEIANRVHDSITKVTNEAHFLDLID 118
            R+     P   Y GN     V +++  EL+   +  IA  V ++  KV ++ +   +ID
Sbjct: 287 SRLNPPLPP--GYFGNAYFSVVAKSTAAELESNPLGWIAELVKEAKKKVIDDEYLESVID 344

Query: 119 WIECHRPGLMLARVVLGRDGPTVVVSSGRRFPVAELDFGFGNPVLGAVSSIIERSGVGYI 178
           W+E   P  +       +D P  +VSS  RFP  E+DFG+G PV            V  I
Sbjct: 345 WVENSLP--LKGFYEGTKDDPAFLVSSWCRFPFYEVDFGWGKPVYVGPVVPPFGDIVLLI 402

Query: 179 NQRPSATCDGSWTVSAILWPELATALESD 207
              PS   DG   V+  L  E  +  E +
Sbjct: 403 ---PSPGDDGGVEVAVCLPEEAMSKFEKE 428

This family includes a number of transferase enzymes. These include anthranilate N-hydroxycinnamoyl/benzoyltransferase that catalyzes the first committed reaction of phytoalexin biosynthesis. Deacetylvindoline 4-O-acetyltransferase EC:2.3.1.107 catalyzes the last step in vindoline biosynthesis is also a member of this family. The motif HXXXD is probably part of the active site. The family also includes trichothecene 3-O-acetyltransferase. Length = 432

>gnl\|CDD\|215266 PLN02481, PLN02481, Omega-hydroxypalmitate O-feruloyl transferase	Back alignment and domain information

>gnl\|CDD\|166304 PLN02663, PLN02663, hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase	Back alignment and domain information

>gnl\|CDD\|165708 PLN00140, PLN00140, alcohol acetyltransferase family protein; Provisional	Back alignment and domain information

>gnl\|CDD\|178702 PLN03157, PLN03157, spermidine hydroxycinnamoyl transferase; Provisional	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		221
PLN02663		431	hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinn	100.0
PLN03157		447	spermidine hydroxycinnamoyl transferase; Provision	100.0
PLN02481		436	Omega-hydroxypalmitate O-feruloyl transferase	100.0
PLN00140		444	alcohol acetyltransferase family protein; Provisio	100.0
PF02458		432	Transferase: Transferase family; InterPro: IPR0034	100.0
PRK09294		416	acyltransferase PapA5; Provisional	98.61
PF07247		480	AATase: Alcohol acetyltransferase; InterPro: IPR01	97.79
TIGR02946		446	acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT. This b	95.86
COG4908		439	Uncharacterized protein containing a NRPS condensa	94.19
PF07428		413	Tri3: 15-O-acetyltransferase Tri3; InterPro: IPR00	82.98
PF00668		301	Condensation: Condensation domain; InterPro: IPR00	81.92

>PLN02663 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase	Back alignment and domain information

Probab=100.00  E-value=5.4e-45  Score=321.86  Aligned_cols=200  Identities=23%  Similarity=0.341  Sum_probs=175.2

Q ss_pred             CEEEeCHHHHHHHHHHhhhcC--CCccHHHHHHHHHHHHHHhhcc-CCCceeEEEEEeeCCCCCCCCCCCCcCcccceec
Q 039950            1 RLYHIDASSISRLQQLASVKG--KKRTKVEAFSAYIWKIMVTSID-EKHGKCKMGWLVDGRCRILKHENPMSSYIGNVLS   77 (221)
Q Consensus         1 r~f~~~~~~i~~Lk~~~~~~~--~~~St~d~l~A~lW~~~~~ar~-~~~~~~~l~~~vd~R~rl~p~~~lp~~y~GN~~~   77 (221)
                      |+|+|++++|++||+.+.+.+  .++|++|||+||+|+|+++|+. ++++.+.+.++||+|+|++||  +|++|+||++.
T Consensus       224 ~~f~fs~~~i~~LK~~~~~~~~~~~~S~~dalsA~lW~~~~rA~~~~~~~~~~~~~~vd~R~rl~p~--lp~~Y~GN~~~  301 (431)
T PLN02663        224 SIFKLTRDQLNTLKAKSKEDGNTISYSSYEMLAGHVWRSACKARGLPDDQETKLYIATDGRSRLRPQ--LPPGYFGNVIF  301 (431)
T ss_pred             EEEEECHHHHHHHHhhCcccCCCcccchHHHHHHHHHhhhhhcccCCCccceEEEEEecCCcCCCCC--CCCCcccceEE
Confidence            579999999999999987532  5799999999999999999998 678899999999999999999  99999999999


Q ss_pred             ccccccchhhhhcCCHHHHHHHHHHHHhhcChHHHHHHHHHHHHhccCCchhhhhhcCCCCCcEEEecCCCCCCCccccC
Q 039950           78 LAVGEASVTELKQGSISEIANRVHDSITKVTNEAHFLDLIDWIECHRPGLMLARVVLGRDGPTVVVSSGRRFPVAELDFG  157 (221)
Q Consensus        78 ~~~~~~~~~~l~~~~L~~~A~~iR~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~y~~DFG  157 (221)
                      .+.+..+++|+.+.+|+.+|..||+++++++ ++|+++.++|++.+++...+........+.++.+|||+++++|++|||
T Consensus       302 ~~~~~~~~~el~~~~l~~~a~~ir~ai~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vssw~~~~~y~~DFG  380 (431)
T PLN02663        302 TATPIAVAGELQSKPTWYAAGKIHDALVRMD-DDYLRSALDYLELQPDLSALVRGAHTFRCPNLGITSWVRLPIYDADFG  380 (431)
T ss_pred             ecccccchhhhhhCCHHHHHHHHHHHHHHhC-HHHHHHHHHHHHhCcccchhhcccCcCcCCcEEecccCCCCccccccC
Confidence            9998889999999999999999999999999 999999999998766543221111112356799999999999999999


Q ss_pred             CCcccccccccccCCcceeEEEEecCCCCCCCEEEEEeccHHHHHHhhc
Q 039950          158 FGNPVLGAVSSIIERSGVGYINQRPSATCDGSWTVSAILWPELATALES  206 (221)
Q Consensus       158 ~G~P~~~~~~~~~~~~~~g~~~ilp~~~~~g~~~v~v~L~~e~m~~l~~  206 (221)
                      ||+|+++++....   .+|+++++|+++++|+++|.|+|++++|++|++
T Consensus       381 wGkP~~v~~~~~~---~~g~~~~~p~~~~~g~iev~v~L~~~~m~~f~~  426 (431)
T PLN02663        381 WGRPIFMGPGGIA---YEGLSFILPSPTNDGSLSVAISLQSEHMKLFEK  426 (431)
T ss_pred             CCccccccccccc---CCCeEEEeccCCCCCcEEEEEECCHHHHHHHHH
Confidence            9999999875432   478999999988889999999999999999986

>PLN03157 spermidine hydroxycinnamoyl transferase; Provisional	Back alignment and domain information

>PLN02481 Omega-hydroxypalmitate O-feruloyl transferase	Back alignment and domain information

>PLN00140 alcohol acetyltransferase family protein; Provisional	Back alignment and domain information

>PF02458 Transferase: Transferase family; InterPro: IPR003480 This family includes a number of transferase enzymes	Back alignment and domain information

>PRK09294 acyltransferase PapA5; Provisional	Back alignment and domain information

>PF07247 AATase: Alcohol acetyltransferase; InterPro: IPR010828 This family contains a number of alcohol acetyltransferase (2	Back alignment and domain information

>TIGR02946 acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT	Back alignment and domain information

>COG4908 Uncharacterized protein containing a NRPS condensation (elongation) domain [General function prediction only]	Back alignment and domain information

>PF07428 Tri3: 15-O-acetyltransferase Tri3; InterPro: IPR009992 This family represents a conserved region approximately 400 residues long within 15-O-acetyltransferase (Tri3), which seems to be restricted to ascomycete fungi	Back alignment and domain information

>PF00668 Condensation: Condensation domain; InterPro: IPR001242 This domain is found in many multi-domain enzymes which synthesize peptide antibiotics	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		221
4g2m_A		439	Structure Of A Lys-Hct Mutant From Coffea Canephora		2e-09
4g22_A		439	Structure Of A Lys-Hct Mutant From Coffea Canephora		2e-09
4g0b_A		436	Structure Of Native Hct From Coffea Canephora Lengt		3e-09

>pdb|4G2M|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora (Crystal Form 2) Length = 439

Back alignment and structure

Iteration: 1

Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 53/211 (25%), Positives = 96/211 (45%), Gaps = 17/211 (8%) Query: 7 ASSISRL--QQLASVKGKKR--------TKVEAFSAYIWKIMVTSID-EKHGKCKMGWLV 55 A SI +L +Q++++K K + + E + ++W+ + E K+ Sbjct: 230 AVSIFKLTREQISALKAKSKEDGNTISYSSYEMLAGHVWRCACKARGLEVDQGTKLYIAT 289 Query: 56 DGRCRILKHENPMSSYIGNVLSLAVGEASVTELKQGSISEIANRVHDSITKVTNEAHFLD 115 DGR R+ P Y GNV+ A A +L+ + A+++HD++ ++ N+ + Sbjct: 290 DGRARLRPSLPP--GYFGNVIFTATPIAIAGDLEFKPVWYAASKIHDALARMDND-YLRS 346 Query: 116 LIDWIECHRPGLMLARVVLGRDGPTVVVSSGRRFPVAELDFGFGNPVLGAVSSIIERSGV 175 +D++E L R P + ++S R P+ + DFG+G P+ I G+ Sbjct: 347 ALDYLELQPDLKALVRGAHTFKXPNLGITSWVRLPIHDADFGWGRPIFMGPGG-IAYEGL 405 Query: 176 GYINQRPSATCDGSWTVSAILWPELATALES 206 +I PS T DGS +V+ L E +S Sbjct: 406 SFI--LPSPTNDGSMSVAISLQGEHMKLFQS 434

PyMOL of 4g2m

>pdb|4G22|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora (Crystal Form 1) Length = 439

Back alignment and structure

>pdb|4G0B|A Chain A, Structure Of Native Hct From Coffea Canephora Length = 436

Back alignment and structure

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		221
4g22_A		439	Hydroxycinnamoyl-COA shikimate/quinate hydroxycinn	1e-40
2rkv_A		451	Trichothecene 3-O-acetyltransferase; BAHD superfam	1e-37
2e1v_A		454	Acyl transferase; BAHD superfamily, seleno-methion	2e-32
2xr7_A		453	Malonyltransferase; xenobiotics, naphthols; HET: M	4e-30
2bgh_A		421	Vinorine synthase; VS, BAHD, acetyltransferase, au	2e-29

>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A Length = 439	Back alignment and structure

 Score =  142 bits (360), Expect = 1e-40
 Identities = 49/211 (23%), Positives = 92/211 (43%), Gaps = 13/211 (6%)

Query: 1   RLYHIDASSISRLQQLASVKGKKR--TKVEAFSAYIWKIMVTSIDEKHGK-CKMGWLVDG 57
            ++ +    IS L+  +   G     +  E  + ++W+    +   +  +  K+    DG
Sbjct: 232 SIFKLTREQISALKAKSKEDGNTISYSSYEMLAGHVWRCACKARGLEVDQGTKLYIATDG 291

Query: 58  RCRILKHENP--MSSYIGNVLSLAVGEASVTELKQGSISEIANRVHDSITKVTNEAHFLD 115
           R R+     P     Y GNV+  A   A   +L+   +   A+++HD++ ++ N+ +   
Sbjct: 292 RARL----RPSLPPGYFGNVIFTATPIAIAGDLEFKPVWYAASKIHDALARMDND-YLRS 346

Query: 116 LIDWIECHRPGLMLARVVLGRDGPTVVVSSGRRFPVAELDFGFGNPVLGAVSSIIERSGV 175
            +D++E       L R       P + ++S  R P+ + DFG+G P+       I   G+
Sbjct: 347 ALDYLELQPDLKALVRGAHTFKCPNLGITSWVRLPIHDADFGWGRPIFMGPGG-IAYEGL 405

Query: 176 GYINQRPSATCDGSWTVSAILWPELATALES 206
            +I   PS T DGS +V+  L  E     +S
Sbjct: 406 SFIL--PSPTNDGSMSVAISLQGEHMKLFQS 434

PyMOL of 4g22

>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A* Length = 451	Back alignment and structure

>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A Length = 454	Back alignment and structure

>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum} Length = 453	Back alignment and structure

>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina} Length = 421	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		221
4g22_A		439	Hydroxycinnamoyl-COA shikimate/quinate hydroxycinn	100.0
2rkv_A		451	Trichothecene 3-O-acetyltransferase; BAHD superfam	100.0
2xr7_A		453	Malonyltransferase; xenobiotics, naphthols; HET: M	100.0
2e1v_A		454	Acyl transferase; BAHD superfamily, seleno-methion	100.0
2bgh_A		421	Vinorine synthase; VS, BAHD, acetyltransferase, au	100.0
3fot_A		519	15-O-acetyltransferase; fusarium head blight, tric	95.98
1q9j_A		422	PAPA5, polyketide synthase associated protein 5; c	95.67
1l5a_A		436	Amide synthase, VIBH; nonribosomal peptide synthet	91.34
2jgp_A		520	Tyrocidine synthetase 3; multifunctional enzyme, a	89.54
2xhg_A		466	Tyrocidine synthetase A; isomerase, nonribosomal p	88.42
4hvm_A		493	Tlmii; PSI-biology, midwest center for structural	85.4

>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A	Back alignment and structure

Probab=100.00  E-value=5e-47  Score=334.27  Aligned_cols=200  Identities=23%  Similarity=0.327  Sum_probs=176.6

Q ss_pred             CEEEeCHHHHHHHHHHhhhc--CCCccHHHHHHHHHHHHHHhhcc-CCCceeEEEEEeeCCCCCCCCCCCCcCcccceec
Q 039950            1 RLYHIDASSISRLQQLASVK--GKKRTKVEAFSAYIWKIMVTSID-EKHGKCKMGWLVDGRCRILKHENPMSSYIGNVLS   77 (221)
Q Consensus         1 r~f~~~~~~i~~Lk~~~~~~--~~~~St~d~l~A~lW~~~~~ar~-~~~~~~~l~~~vd~R~rl~p~~~lp~~y~GN~~~   77 (221)
                      |+|+|++++|++||+.+.++  ..++|+||+|+||+|+|+++||. ++++.+.+.++||+|+|++||  +|++||||++.
T Consensus       232 ~~f~fs~~~i~~LK~~a~~~~~~~~~St~dal~A~iWr~~~rAr~~~~~~~~~l~~~vd~R~rl~Pp--lp~~Y~GN~v~  309 (439)
T 4g22_A          232 SIFKLTREQISALKAKSKEDGNTISYSSYEMLAGHVWRCACKARGLEVDQGTKLYIATDGRARLRPS--LPPGYFGNVIF  309 (439)
T ss_dssp             EEEEECHHHHHHHHHGGGGGGCCCCCCHHHHHHHHHHHHHHHHTTCCTTCEEEEEEEEECTTTSSSC--CCTTBCSCCEE
T ss_pred             EEEEECHHHHHHHHHHhhccCCCCCccHHHHHHHHHHHHHHHhcCCCCCCcEEEEEEEcccCCCCCC--CCCCcccceee
Confidence            58999999999999999764  36899999999999999999998 678899999999999999999  99999999999


Q ss_pred             ccccccchhhhhcCCHHHHHHHHHHHHhhcChHHHHHHHHHHHHhccCCchhhhhhcCCCCCcEEEecCCCCCCCccccC
Q 039950           78 LAVGEASVTELKQGSISEIANRVHDSITKVTNEAHFLDLIDWIECHRPGLMLARVVLGRDGPTVVVSSGRRFPVAELDFG  157 (221)
Q Consensus        78 ~~~~~~~~~~l~~~~L~~~A~~iR~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~y~~DFG  157 (221)
                      .+.+.++++||.+.+|+++|.+||+++.+++ ++++++.++|++..++...+..........++.+|||+++++|++|||
T Consensus       310 ~~~~~~~~~el~~~~L~~~A~~Ir~ai~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vssw~r~~~y~~DFG  388 (439)
T 4g22_A          310 TATPIAIAGDLEFKPVWYAASKIHDALARMD-NDYLRSALDYLELQPDLKALVRGAHTFKCPNLGITSWVRLPIHDADFG  388 (439)
T ss_dssp             EECCEEEHHHHHHSCHHHHHHHHHHHHHTCS-HHHHHHHHHHHHTCSCSTTCCCCHHHHCTTCEEEEECTTSCTTCCCCS
T ss_pred             hhhcceEHHHHhhCcHHHHHHHHHHHHHhhC-HHHHHHHHHHHHhCccchhhcccCCcCcCCcEEEeecCcCCccccccC
Confidence            9999999999999999999999999999998 999999999998775543221111111356899999999999999999


Q ss_pred             CCcccccccccccCCcceeEEEEecCCCCCCCEEEEEeccHHHHHHhhc
Q 039950          158 FGNPVLGAVSSIIERSGVGYINQRPSATCDGSWTVSAILWPELATALES  206 (221)
Q Consensus       158 ~G~P~~~~~~~~~~~~~~g~~~ilp~~~~~g~~~v~v~L~~e~m~~l~~  206 (221)
                      ||+|+++++....   .+|.++++|+++++||++|.|+|++++|++|++
T Consensus       389 wGkP~~~~~~~~~---~~g~~~~~p~~~~~ggi~v~v~L~~~~m~~f~~  434 (439)
T 4g22_A          389 WGRPIFMGPGGIA---YEGLSFILPSPTNDGSMSVAISLQGEHMKLFQS  434 (439)
T ss_dssp             SCCCSEEEESSCC---STTEEEEEECTTCSSCEEEEEEEEHHHHHHHHH
T ss_pred             CCCcceeeccccC---CCcEEEEeecCCCCCcEEEEEECCHHHHHHHHH
Confidence            9999999976543   478999999988889999999999999999986

PyMOL of 4g22

>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*	Back alignment and structure

>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}	Back alignment and structure

>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A	Back alignment and structure

>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}	Back alignment and structure

>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*	Back alignment and structure

>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2	Back alignment and structure

>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2	Back alignment and structure

>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}	Back alignment and structure

>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}	Back alignment and structure

>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		221
d1q9ja2		238	Polyketide synthase associated protein 5, PapA5 {M	97.73
d1l5aa2		250	VibH {Vibrio cholerae [TaxId: 666]}	83.68

>d1q9ja2 c.43.1.2 (A:181-418) Polyketide synthase associated protein 5, PapA5 {Mycobacterium tuberculosis [TaxId: 1773]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: CoA-dependent acyltransferases
superfamily: CoA-dependent acyltransferases
family: NRPS condensation domain (amide synthase)
domain: Polyketide synthase associated protein 5, PapA5
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.73  E-value=0.00016  Score=55.42  Aligned_cols=99  Identities=14%  Similarity=0.068  Sum_probs=76.2

Q ss_pred             EEeCHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHHHhhccCCCceeEEEEEeeCCCCCCCCCCCCcCcccceecccccc
Q 039950            3 YHIDASSISRLQQLASVKGKKRTKVEAFSAYIWKIMVTSIDEKHGKCKMGWLVDGRCRILKHENPMSSYIGNVLSLAVGE   82 (221)
Q Consensus         3 f~~~~~~i~~Lk~~~~~~~~~~St~d~l~A~lW~~~~~ar~~~~~~~~l~~~vd~R~rl~p~~~lp~~y~GN~~~~~~~~   82 (221)
                      +.++++.-++|++.|.+  ..+|.+.++.|-+-..+.+-...++....+.++++.|+++.|+  ..++.+||.+......
T Consensus        36 ~~ls~~~t~~l~~~~~~--~~~T~~~~l~aa~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~--~~~~~~G~~~~~~~~r  111 (238)
T d1q9ja2          36 LWLSKQQTSDLMAFGRE--HRLSLNAVVAAAILLTEWQLRNTPHVPIPYVYPVDLRFVLAPP--VAPTEATNLLGAASYL  111 (238)
T ss_dssp             ECCCHHHHHHHHHHHTT--TTCCHHHHHHHHHHHHHHHHHTCSSCCEEEEEEEETTTTSSSC--CCTTTBSCCEEEEEEE
T ss_pred             EEeCHHHHHHHHHHHHh--cCCcHHHHHHHHHHHHHHHHhCCCCccccccccccccccccCc--cccceeEeeeeeEEEE
Confidence            57899999999999976  5689999999975555544444455667889999999999987  7778889987766555


Q ss_pred             cchhhhhcCCHHHHHHHHHHHHhhc
Q 039950           83 ASVTELKQGSISEIANRVHDSITKV  107 (221)
Q Consensus        83 ~~~~~l~~~~L~~~A~~iR~~i~~~  107 (221)
                      ..+..  +.++.++++.+++.+...
T Consensus       112 ~~~~~--~~~~~~l~~~v~~~l~~~  134 (238)
T d1q9ja2         112 AEIGP--NTDIVDLASDIVATLRAD  134 (238)
T ss_dssp             ECCCS--SCCHHHHHHHHHHHHHHH
T ss_pred             EecCC--CCCHHHHHHHHHHHHHHH
Confidence            44432  467899999998887643

PyMOL of d1q9ja2

>d1l5aa2 c.43.1.2 (A:175-424) VibH {Vibrio cholerae [TaxId: 666]}	Back information, alignment and structure