Citrus Sinensis ID: 039980

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-----
Protein Sequence
MDGFEIDTVLLLFSFGLVLNSSYTASCSFGNGNRISVSSCTMIHEDEGSVPSVIASDECLSLLQWPISTTASLRNRTIECQFAQLKGRRKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLHYVSKMYKLMVQIQGRADYG
Secondary Structure (PSIPRED)
ccccEEHHHHHHHHHHHHHHHcccccccccccccccccEEEEEEcccccccEEEccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccEEEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccccEEHHHHHHHHHHEEEEEEEEcccEccccccEEEEEEEEEEcccccccEEEcccccccccccccccccccccccccHHHHHHccccccHcccEEEccccEEccccccccEEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
MDGFEIDTVLLLFSFGLvlnssytascsfgngnrisvssctmihedegsvpsviaSDEClsllqwpisttaSLRNRTIECQFAQLKGRRKYQedritcdldmnmpslgkndlkeVRLGIAAvfdghggseASEMASHLLLNYFHLHYVSKMYKLMVQIQGRADYG
Flexible Loop (DISEMBL)
MDGFEIDTVLLLFSFGLVLNSSYTASCSFGNGNRISVSSCTMIHEDEGSVPSVIASDECLSLLQWPISTTASLRNRTIECQfaqlkgrrkyQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLHYVSKMYKLMVQIQGRADYG
Low Complexity Region (SEG)
MDGFEIDTVLLLFSFGLVLNSSYTASCSFGNGNRISVSSCTMIHEDEGSVPSVIASDECLSLLQWPISTTASLRNRTIECQFAQLKGRRKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLHYVSKMYKLMVQIQGRADYG
Disordered region (IsUnstruct)
***FEIDTVLLLFSFGLVLNSSYTASCSFGNGNRISVSSCTMIHEDEGSVPSVIASDECLSLLQWPISTTASLRNRTIECQFAQLKGRRKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLHYVSKMYKLMVQIQ******
Disordered Region (DISOPRED)
**GFEIDTVLLLFSFGLVLNSSYTASCSFG****ISVSSCTMIHEDEGSVPSVIASDECLSLLQ****************************EDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLHYVSKMYKLMVQIQG*****
Disordered Region (DISEMBL)
MDGFEIDTVLLLFSFGLVLNSSYTASCSFGNGNRISVSSCTMIHEDEGSVPSVIASDECLSLLQWPISTTASLRNRTIECQFAQLKGRRKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLHYVSKMYKLMVQIQGRADYG
Disordered Region (DISPRO)
*DGFEIDTVLLLFSFGLVLNSSYTASCSFGNGNRISVSSCTMIHEDEGSVPSVIASDECLSLLQWPISTT********ECQ********KYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLHYVSKMYKLMVQIQGR****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MDGFEIDTVLLLFSFGLVLNSSYTASCSFGNGNRISVSSCTMIHEDEGSVPSVIASDECLSLLQWPISTTASLRNRTIECQFAQLKGRRKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLHYVSKMYKLMVQIQGRADYG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	165	2.2.26 [Sep-21-2011]
Q93YS2	528	Probable protein phosphat	yes	no	0.636	0.198	0.486	4e-19
A3CCP9	499	Putative protein phosphat	yes	no	0.406	0.134	0.558	1e-14
Q9M1V8	423	Putative protein phosphat	no	no	0.206	0.080	0.794	1e-08

>sp|Q93YS2|P2C51_ARATH Probable protein phosphatase 2C 51 OS=Arabidopsis thaliana GN=At3g63340 PE=2 SV=2

 Score = 94.0 bits (232), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 54/111 (48%), Positives = 72/111 (64%), Gaps = 6/111 (5%)

Query: 38  SSCTMIHEDEGSVPSVIASDECLS-LLQWPISTTASLRNRTIECQFAQLKGRRKYQEDRI 96
           S+C  +++ +G  P+V  S +C   +LQ   S T S   R   C  A ++GRR YQEDR+
Sbjct: 33  STCLAVYK-QGGAPAVFQSPKCPRWILQNWGSPTHSGAGR---CHTAAIQGRRNYQEDRL 88

Query: 97  TCDLDMNMPSLGKNDL-KEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLH 146
            C LD+ +P  GK    K+V +GIAAVFDGH G+EAS+MAS LLL+YF LH
Sbjct: 89  LCALDLRIPFPGKTGTPKDVLVGIAAVFDGHNGAEASDMASKLLLDYFALH 139

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6

>sp|A3CCP9|P2C76_ORYSJ Putative protein phosphatase 2C 76 OS=Oryza sativa subsp. japonica GN=Os11g0586001 PE=3 SV=2

 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 38/68 (55%), Positives = 48/68 (70%), Gaps = 1/68 (1%)

Query: 80  CQFAQLKGRRKYQEDRITCDLDMNMPSLG-KNDLKEVRLGIAAVFDGHGGSEASEMASHL 138
           C  A  +GRR+ QEDR  C L + +P +G  + +KEV +G+ AVFDGH G+EASEMAS L
Sbjct: 93  CHVAVDRGRRRSQEDRAVCALGIRIPFIGIYHKIKEVDVGVVAVFDGHNGAEASEMASKL 152

Query: 139 LLNYFHLH 146
           LL YF LH
Sbjct: 153 LLEYFLLH 160

Oryza sativa subsp. japonica (taxid: 39947)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|Q9M1V8|P2C50_ARATH Putative protein phosphatase 2C 50 OS=Arabidopsis thaliana GN=At3g63320 PE=3 SV=1

 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/34 (79%), Positives = 30/34 (88%)

Query: 113 KEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLH 146
           K+V +GIAAVFDGH GSEASEMAS LLL+YF LH
Sbjct: 63  KDVLVGIAAVFDGHSGSEASEMASQLLLDYFALH 96

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	165
296084481	365	unnamed protein product [Vitis vinifera]	0.769	0.347	0.453	4e-26
359495449	363	PREDICTED: probable protein phosphatase	0.666	0.303	0.466	6e-24
359495451	1211	PREDICTED: uncharacterized protein LOC10	0.630	0.085	0.522	9e-21
296084483	1069	unnamed protein product [Vitis vinifera]	0.630	0.097	0.522	9e-21
356502797	1135	PREDICTED: uncharacterized protein LOC10	0.636	0.092	0.486	4e-20
297821258	522	predicted protein [Arabidopsis lyrata su	0.751	0.237	0.426	2e-19
449515742	500	PREDICTED: probable protein phosphatase	0.636	0.21	0.477	9e-19
449455346	1062	PREDICTED: uncharacterized protein LOC10	0.636	0.098	0.477	1e-18
357440603	1108	hypothetical protein MTR_1g071370 [Medic	0.636	0.094	0.467	3e-18
255559843	1058	protein phosphatase 2c, putative [Ricinu	0.636	0.099	0.452	4e-18

>gi|296084481|emb|CBI25040.3| unnamed protein product [Vitis vinifera]

 Score =  122 bits (307), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 63/139 (45%), Positives = 87/139 (62%), Gaps = 12/139 (8%)

Query: 27  CSFGNGNRISVSSCTMIHEDEGSVPSVIASDECLSLLQWPISTTASLRNRTIECQFAQLK 86
           C   + N +SVS C M++ DEG   +V  S EC     W       + N+T+ CQFA ++
Sbjct: 16  CRIPSSNGVSVS-CMMVY-DEGGAAAVFRSPECPD---W-----KPIHNQTLNCQFATIR 65

Query: 87  GRRKYQEDRITCDLDMNMPSL--GKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFH 144
           G R+YQEDRI+CDLDM +P L  GK + +E+R+G+  VFDGHGG EAS+MAS L ++YF 
Sbjct: 66  GWREYQEDRISCDLDMKIPLLDEGKREPREMRVGVVGVFDGHGGEEASDMASKLFMDYFL 125

Query: 145 LHYVSKMYKLMVQIQGRAD 163
           LH +  +YK M+      D
Sbjct: 126 LHTIFNIYKKMIAFNKEQD 144

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359495449|ref|XP_002274592.2| PREDICTED: probable protein phosphatase 2C 51-like [Vitis vinifera]

 Score =  115 bits (288), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 56/120 (46%), Positives = 76/120 (63%), Gaps = 10/120 (8%)

Query: 46  DEGSVPSVIASDECLSLLQWPISTTASLRNRTIECQFAQLKGRRKYQEDRITCDLDMNMP 105
           DEG   +V  S EC     W       + N+T+ CQFA ++G R+YQEDRI+CDLDM +P
Sbjct: 4   DEGGAAAVFRSPECPD---W-----KPIHNQTLNCQFATIRGWREYQEDRISCDLDMKIP 55

Query: 106 SL--GKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLHYVSKMYKLMVQIQGRAD 163
            L  GK + +E+R+G+  VFDGHGG EAS+MAS L ++YF LH +  +YK M+      D
Sbjct: 56  LLDEGKREPREMRVGVVGVFDGHGGEEASDMASKLFMDYFLLHTIFNIYKKMIAFNKEQD 115

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359495451|ref|XP_002274621.2| PREDICTED: uncharacterized protein LOC100263200 [Vitis vinifera]

 Score =  105 bits (261), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 57/109 (52%), Positives = 70/109 (64%), Gaps = 5/109 (4%)

Query: 38  SSCTMIHEDEGSVPSVIASDECLSLLQWPISTTASLRNRTIECQFAQLKGRRKYQEDRIT 97
           S+C M+++ EG  P+V  S +C S   W +S  AS R RT+ CQ A  +GRRK QEDR  
Sbjct: 183 STCLMVYK-EGGAPAVFQSPKCPS---WRLSNDAS-RPRTVTCQSAMSQGRRKSQEDRTF 237

Query: 98  CDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLH 146
           C LD+ +P      L EV +GI AVFDGH G+EASEMAS LL  YF LH
Sbjct: 238 CALDVRIPFPRSTGLAEVMVGIVAVFDGHNGAEASEMASKLLFEYFILH 286

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296084483|emb|CBI25042.3| unnamed protein product [Vitis vinifera]

 Score =  105 bits (261), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 57/109 (52%), Positives = 70/109 (64%), Gaps = 5/109 (4%)

Query: 38  SSCTMIHEDEGSVPSVIASDECLSLLQWPISTTASLRNRTIECQFAQLKGRRKYQEDRIT 97
           S+C M+++ EG  P+V  S +C S   W +S  AS R RT+ CQ A  +GRRK QEDR  
Sbjct: 27  STCLMVYK-EGGAPAVFQSPKCPS---WRLSNDAS-RPRTVTCQSAMSQGRRKSQEDRTF 81

Query: 98  CDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLH 146
           C LD+ +P      L EV +GI AVFDGH G+EASEMAS LL  YF LH
Sbjct: 82  CALDVRIPFPRSTGLAEVMVGIVAVFDGHNGAEASEMASKLLFEYFILH 130

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356502797|ref|XP_003520202.1| PREDICTED: uncharacterized protein LOC100781476 [Glycine max]

 Score =  102 bits (255), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 53/109 (48%), Positives = 69/109 (63%), Gaps = 4/109 (3%)

Query: 38  SSCTMIHEDEGSVPSVIASDECLSLLQWPISTTASLRNRTIECQFAQLKGRRKYQEDRIT 97
           S+C  ++++ G  P+V  S +C    +W +S   S    T  CQ A L+GRR  QEDR  
Sbjct: 93  STCLTVYKN-GGAPAVFQSPKCP---RWKLSDYDSPPQTTARCQTAMLQGRRNSQEDRAL 148

Query: 98  CDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLH 146
           C LD+ +P  G N +KEV +GI AVFDGH G+EASEMAS LL+ YF LH
Sbjct: 149 CVLDVRIPFPGPNGIKEVAVGIVAVFDGHNGAEASEMASKLLVEYFVLH 197

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297821258|ref|XP_002878512.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297324350|gb|EFH54771.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  100 bits (250), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 82/143 (57%), Gaps = 19/143 (13%)

Query: 6   IDTVLLLFSFGLVLNSSYTASCSFGNGNRISVSSCTMIHEDEGSVPSVIASDEC--LSLL 63
           I++ LL+ SF L L      +C      R   S+C  +++ +G  P+V  S +C   +L 
Sbjct: 5   INSWLLITSFVLFL---LAINC------RGESSTCLAVYK-QGGAPAVFQSPKCPRWNLH 54

Query: 64  QWPISTTASLRNRTIECQFAQLKGRRKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVF 123
            W  S           C  A ++GRR YQEDR+ C LD+ +P  GK   K+V +GIAAVF
Sbjct: 55  NWGQSGAG-------RCHTAAIRGRRNYQEDRLLCALDLRIPFPGKTGTKDVLVGIAAVF 107

Query: 124 DGHGGSEASEMASHLLLNYFHLH 146
           DGH G+EASEMAS LLL+YF LH
Sbjct: 108 DGHNGAEASEMASKLLLDYFALH 130

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449515742|ref|XP_004164907.1| PREDICTED: probable protein phosphatase 2C 51-like, partial [Cucumis sativus]

 Score = 98.2 bits (243), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 52/109 (47%), Positives = 65/109 (59%), Gaps = 4/109 (3%)

Query: 38  SSCTMIHEDEGSVPSVIASDECLSLLQWPISTTASLRNRTIECQFAQLKGRRKYQEDRIT 97
           S+C M+++ EG  P+V  S +C     W  S           CQ A  +GRRKYQEDR  
Sbjct: 31  STCLMVYK-EGGAPAVFQSPKCP---LWEHSDYTFQSPNAPHCQIAMHQGRRKYQEDRTL 86

Query: 98  CDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLH 146
           C LD+ +P   K  L EV +GI AVFDGH G+EASEMAS +LL YF +H
Sbjct: 87  CALDVRIPFPSKTGLMEVPVGIIAVFDGHNGAEASEMASKILLEYFVVH 135

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449455346|ref|XP_004145414.1| PREDICTED: uncharacterized protein LOC101210198 [Cucumis sativus]

 Score = 98.2 bits (243), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 52/109 (47%), Positives = 65/109 (59%), Gaps = 4/109 (3%)

Query: 38  SSCTMIHEDEGSVPSVIASDECLSLLQWPISTTASLRNRTIECQFAQLKGRRKYQEDRIT 97
           S+C M+++ EG  P+V  S +C     W  S           CQ A  +GRRKYQEDR  
Sbjct: 31  STCLMVYK-EGGAPAVFQSPKCP---LWEHSDYTFQSPNAPHCQIAMHQGRRKYQEDRTL 86

Query: 98  CDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLH 146
           C LD+ +P   K  L EV +GI AVFDGH G+EASEMAS +LL YF +H
Sbjct: 87  CALDVRIPFPSKTGLMEVPVGIIAVFDGHNGAEASEMASKILLEYFVVH 135

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357440603|ref|XP_003590579.1| hypothetical protein MTR_1g071370 [Medicago truncatula] gi|355479627|gb|AES60830.1| hypothetical protein MTR_1g071370 [Medicago truncatula]

 Score = 96.7 bits (239), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 51/109 (46%), Positives = 67/109 (61%), Gaps = 4/109 (3%)

Query: 38  SSCTMIHEDEGSVPSVIASDECLSLLQWPISTTASLRNRTIECQFAQLKGRRKYQEDRIT 97
           S+C  +++  G  P+V  S +C    +W +    S    T  C  A L+GRRK QEDR  
Sbjct: 27  STCLTVYK-HGGAPAVFQSPKCP---RWNLFDHNSRPQYTTRCHSAMLQGRRKSQEDRTL 82

Query: 98  CDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLH 146
           C LD+ +P  G   +KEV +GI AVFDGH G+EASEMAS+LL+ YF LH
Sbjct: 83  CVLDLRIPFPGAMGIKEVVVGIVAVFDGHNGAEASEMASNLLMEYFVLH 131

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255559843|ref|XP_002520940.1| protein phosphatase 2c, putative [Ricinus communis] gi|223539777|gb|EEF41357.1| protein phosphatase 2c, putative [Ricinus communis]

 Score = 96.3 bits (238), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 53/117 (45%), Positives = 71/117 (60%), Gaps = 12/117 (10%)

Query: 38  SSCTMIHEDEGSVPSVIASDECLSLLQWPI--------STTASLRNRTIECQFAQLKGRR 89
           S+C  +++ EG  P+V  S +C    +W +        +TT +    +  CQ A ++GRR
Sbjct: 28  STCLTVYK-EGGAPAVFQSLKCP---RWNLPNYGSRSRTTTGTAFGGSTRCQSAMVQGRR 83

Query: 90  KYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLH 146
           K QEDR  C LD+ +P   K  LKEV +G+ AVFDGH G+EASEMAS LLL YF LH
Sbjct: 84  KSQEDRTLCALDIRIPFPDKTGLKEVMVGLMAVFDGHNGAEASEMASKLLLEYFALH 140

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	165
TAIR|locus:2077319	423	AT3G63320 [Arabidopsis thalian	0.206	0.080	0.794	2.6e-08

TAIR|locus:2077319 AT3G63320 [Arabidopsis thaliana (taxid:3702)]

 Score = 135 (52.6 bits), Expect = 2.6e-08, P = 2.6e-08
 Identities = 27/34 (79%), Positives = 30/34 (88%)

Query:   113 KEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLH 146
             K+V +GIAAVFDGH GSEASEMAS LLL+YF LH
Sbjct:    63 KDVLVGIAAVFDGHSGSEASEMASQLLLDYFALH 96


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.135   0.398    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      165       165   0.00093  107 3  11 22  0.36    32
                                                     30  0.45    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  590 (63 KB)
  Total size of DFA:  151 KB (2092 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.46u 0.10s 14.56t   Elapsed:  00:00:01
  Total cpu time:  14.46u 0.10s 14.56t   Elapsed:  00:00:01
  Start:  Thu May  9 21:03:29 2013   End:  Thu May  9 21:03:30 2013

GO:0003824 "catalytic activity" evidence=IEA

GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.3	0.691

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	165
cd00143	254	cd00143, PP2Cc, Serine/threonine phosphatases, fam	1e-07
smart00332	252	smart00332, PP2Cc, Serine/threonine phosphatases,	4e-05
COG0631	262	COG0631, PTC1, Serine/threonine protein phosphatas	4e-05

>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity

 Score = 49.6 bits (119), Expect = 1e-07
 Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 10/58 (17%)

Query: 86  KGRRKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYF 143
            G RK  ED +            K +L     G+  VFDGHGG  A E AS LL+   
Sbjct: 9   GGDRKTNEDAVVI----------KPNLNNEDGGLFGVFDGHGGHAAGEFASKLLVEEL 56

Length = 254

>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain

 Score = 42.0 bits (99), Expect = 4e-05
 Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 11/57 (19%)

Query: 87  GRRKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYF 143
           G RK  ED      D++              G   VFDGHGGSEA++  S  L    
Sbjct: 18  GVRKPMEDAHVITPDLS-----------DSGGFFGVFDGHGGSEAAKFLSKNLPEIL 63

The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity. Length = 252

>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms]

 Score = 42.0 bits (99), Expect = 4e-05
 Identities = 17/57 (29%), Positives = 22/57 (38%), Gaps = 10/57 (17%)

Query: 87  GRRKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYF 143
             RK+ ED      + N             L + AV DG GG  A E+AS L +   
Sbjct: 18  TVRKHNEDAFLIKPNEN----------GNLLLLFAVADGMGGHAAGEVASKLAVEAL 64

Length = 262

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	165
KOG0697	379	consensus Protein phosphatase 1B (formerly 2C) [Si	99.6
KOG0699	542	consensus Serine/threonine protein phosphatase [Si	99.48
KOG0698	330	consensus Serine/threonine protein phosphatase [Si	99.39
PLN03145	365	Protein phosphatase 2c; Provisional	99.34
PF00481	254	PP2C: Protein phosphatase 2C; InterPro: IPR001932	99.24
PTZ00224	381	protein phosphatase 2C; Provisional	99.23
COG0631	262	PTC1 Serine/threonine protein phosphatase [Signal	98.41
smart00332	255	PP2Cc Serine/threonine phosphatases, family 2C, ca	98.37
KOG0700	390	consensus Protein phosphatase 2C/pyruvate dehydrog	98.35
cd00143	254	PP2Cc Serine/threonine phosphatases, family 2C, ca	98.34
PRK14559	645	putative protein serine/threonine phosphatase; Pro	98.22
KOG1323	493	consensus Serine/threonine phosphatase [Signal tra	96.61
PF13672	212	PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A	94.16
smart00331	193	PP2C_SIG Sigma factor PP2C-like phosphatases.	88.13

>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]

Probab=99.60  E-value=6.1e-16  Score=132.63  Aligned_cols=68  Identities=24%  Similarity=0.274  Sum_probs=60.7

Q ss_pred             CCCeeEEEEEeeeeCCCCCCeeEEEecCCCCCCCCCCCCCCcceEEEEEEcCCCchHHHHHHHHHHHHHHHhcccc
Q 039980           74 RNRTIECQFAQLKGRRKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLHYVS  149 (165)
Q Consensus        74 ~~~~~~~G~~s~~G~R~~MEDr~~v~~~l~~~~~~~~~~~~~~~~ffaVFDGHgG~~aA~y~a~~L~~~i~~~~~f  149 (165)
                      +.+.+++|+++|||||-.|||.|++...+.-+        -.+++||||||||.|+.+|+||++||.++|.+...|
T Consensus        18 ~GNglryg~SSMQGWR~eMEDah~A~~~l~~~--------l~dWSfFAVfDGHAGs~va~~c~~hLlehi~sse~F   85 (379)
T KOG0697|consen   18 EGNGLRYGVSSMQGWRVEMEDAHTAVAGLPSP--------LEDWSFFAVFDGHAGSQVANHCAEHLLEHIISSEEF   85 (379)
T ss_pred             cCCceeeeeccccchhhhhhhhhhhhhcCCCC--------ccCceEEEEEcCccchHHHHHHHHHHHHHhhhhHHH
Confidence            45789999999999999999999987666433        248999999999999999999999999999998888

>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]

Probab=99.48  E-value=2e-14  Score=127.01  Aligned_cols=63  Identities=24%  Similarity=0.463  Sum_probs=56.4

Q ss_pred             CeeEEEEEeeeeCCCCCCeeEEEecCCCCCCCCCCCCCCcceEEEEEEcCCCchHHHHHHHHHHHHHHHhcccc
Q 039980           76 RTIECQFAQLKGRRKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLHYVS  149 (165)
Q Consensus        76 ~~~~~G~~s~~G~R~~MEDr~~v~~~l~~~~~~~~~~~~~~~~ffaVFDGHgG~~aA~y~a~~L~~~i~~~~~f  149 (165)
                      +-+.||..+|||||.+|||+|-|+++|.           ..+++|+|||||||.++|+||+..|+.+|.+...+
T Consensus        20 ~lL~yg~s~MQGWRvsqEDAHNci~~ld-----------~~t~mF~VYDGHGG~EVa~yca~kLPdflK~~k~y   82 (542)
T KOG0699|consen   20 NLLSYGCSTMQGWRVSQEDAHNCIVDLD-----------TDTHMFGVYDGHGGTEVAKYCAAKLPDFLKERKFY   82 (542)
T ss_pred             ccchhchhhhhccccchhhhhccccccc-----------CcceEEEEecCCCcHHHHHHHHHhhhHHHHhHHhh
Confidence            4578999999999999999999998884           48999999999999999999999999988765444

>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]

Probab=99.39  E-value=6.8e-13  Score=114.98  Aligned_cols=68  Identities=25%  Similarity=0.293  Sum_probs=56.8

Q ss_pred             EEEEeeeeCCCCCCeeEEEecCCCCCCCCCCCCCCc-ceEEEEEEcCCCchHHHHHHHHHHHHHHHhcccchhh
Q 039980           80 CQFAQLKGRRKYQEDRITCDLDMNMPSLGKNDLKEV-RLGIAAVFDGHGGSEASEMASHLLLNYFHLHYVSKMY  152 (165)
Q Consensus        80 ~G~~s~~G~R~~MEDr~~v~~~l~~~~~~~~~~~~~-~~~ffaVFDGHgG~~aA~y~a~~L~~~i~~~~~f~~~  152 (165)
                      .+.++.+|+|+.|||++.+.+++....     .... +.+||||||||||..||+||++|||+.|.++..+...
T Consensus        42 ~~~~~~~~~r~~med~~~~~~~~~~~~-----~~~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l~~~~~~~~~  110 (330)
T KOG0698|consen   42 GSLLSIRGRRRKMEDRHVQLPDFLEED-----VGGEQDTAFFGVFDGHGGDLAAKFAAKHLHKNLLEQLAFPKD  110 (330)
T ss_pred             eEEEecCCCCCccCcceeecccccccc-----cCCCCceEEEEEEeCCCCHHHHHHHHHHHHHHHHhhhhcccc
Confidence            566699999999999999988875321     1122 6899999999999999999999999999999888553

>PLN03145 Protein phosphatase 2c; Provisional

Probab=99.34  E-value=2.7e-12  Score=113.20  Aligned_cols=72  Identities=22%  Similarity=0.186  Sum_probs=56.6

Q ss_pred             eeEEEEEeeeeCCCCCCeeEEEecCCCCCCCCCCCCCCcceEEEEEEcCCCchHHHHHHHHHHHHHHHhcccc
Q 039980           77 TIECQFAQLKGRRKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLHYVS  149 (165)
Q Consensus        77 ~~~~G~~s~~G~R~~MEDr~~v~~~l~~~~~~~~~~~~~~~~ffaVFDGHgG~~aA~y~a~~L~~~i~~~~~f  149 (165)
                      .+++|..+.+|.|++|||+|++..++...+... .....+..||||||||||..+++|++++|++.|.++..+
T Consensus        64 ~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~-~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~~  135 (365)
T PLN03145         64 VVRSGAWADIGSRSSMEDVYICVDNFMSDFGLK-NSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDEDF  135 (365)
T ss_pred             ceEEEEEccccCCCCCCCceEeccccccccccc-ccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhcc
Confidence            357899999999999999999877653221110 011235789999999999999999999999999887665

>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg

Probab=99.24  E-value=7.5e-12  Score=103.37  Aligned_cols=65  Identities=32%  Similarity=0.430  Sum_probs=55.7

Q ss_pred             EEEEEeeeeCCCCCCeeEEEecCCCCCCCCCCCCCCcceEEEEEEcCCCchHHHHHHHHHHHHHHHhcccc
Q 039980           79 ECQFAQLKGRRKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLHYVS  149 (165)
Q Consensus        79 ~~G~~s~~G~R~~MEDr~~v~~~l~~~~~~~~~~~~~~~~ffaVFDGHgG~~aA~y~a~~L~~~i~~~~~f  149 (165)
                      .+|+.+++|+|++|||++++..++...      ....+..+|||||||||.++|+|++++|++.+.+...+
T Consensus         1 ~~~~~~~~g~r~~~eD~~~~~~~~~~~------~~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~   65 (254)
T PF00481_consen    1 DYGVSSMQGVRKEMEDRHLIIQNFNSN------SGNDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLSF   65 (254)
T ss_dssp             EEEEEEEECTSSSHHEEEEEEEEETCC------TTEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcCeecCCCCCCcccCEEEEecCcccc------CCCCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhccc
Confidence            378999999999999999998877422      12458899999999999999999999999888877666

pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....

>PTZ00224 protein phosphatase 2C; Provisional

Probab=99.23  E-value=2.1e-11  Score=108.23  Aligned_cols=61  Identities=26%  Similarity=0.294  Sum_probs=51.4

Q ss_pred             CCCeeEEEEEeeeeCCCCCCeeEEEecCCCCCCCCCCCCCCcceEEEEEEcCCCchHHHHHHHHHHHHHHHhcc
Q 039980           74 RNRTIECQFAQLKGRRKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLHY  147 (165)
Q Consensus        74 ~~~~~~~G~~s~~G~R~~MEDr~~v~~~l~~~~~~~~~~~~~~~~ffaVFDGHgG~~aA~y~a~~L~~~i~~~~  147 (165)
                      .+..+.+|.++++|+|++|||++++..+             .+..+|||||||+|.+||+|++++|++.+.++.
T Consensus        18 ~~~~~~~g~~s~~G~R~~nED~~~v~~~-------------~~~~lfgVfDGHgG~~~S~~~~~~l~~~l~~~~   78 (381)
T PTZ00224         18 GNSIFRCASACVNGYRESMEDAHLLYLT-------------DDWGFFGVFDGHVNDECSQYLARAWPQALEKEP   78 (381)
T ss_pred             CCccEEEEEEeCCCCCCCCCCeeEeccC-------------CCceEEEEEeCCCcHHHHHHHHHHHHHHHHhcc
Confidence            3567889999999999999999886421             245699999999999999999999999886554

>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]

Probab=98.41  E-value=5.2e-07  Score=76.05  Aligned_cols=57  Identities=30%  Similarity=0.339  Sum_probs=45.2

Q ss_pred             EEEEeeeeCCCCCCeeEEEecCCCCCCCCCCCCCCcceEEEEEEcCCCchHHHHHHHHHHHHHHHhc
Q 039980           80 CQFAQLKGRRKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLH  146 (165)
Q Consensus        80 ~G~~s~~G~R~~MEDr~~v~~~l~~~~~~~~~~~~~~~~ffaVFDGHgG~~aA~y~a~~L~~~i~~~  146 (165)
                      .+.....+.|.+|||.+.+..+-.         ... ..||+|||||||.+++++|++.+.+.|.+.
T Consensus        11 ~~~s~~g~~R~~NeD~~~~~~~~~---------~~~-~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~   67 (262)
T COG0631          11 AGLSDVGTVRKHNEDAFLIKPNEN---------GNL-LLLFAVADGMGGHAAGEVASKLAVEALARL   67 (262)
T ss_pred             eeeccCCCccCCCCcceeeccccC---------Ccc-eeEEEEEeCccchhHHHHHHHHHHHHHHHH
Confidence            455556667999999998865221         123 789999999999999999999999888765

>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain

Probab=98.37  E-value=1.3e-06  Score=70.55  Aligned_cols=60  Identities=30%  Similarity=0.418  Sum_probs=49.4

Q ss_pred             eEEEEEeeeeCCCCCCeeEEEecCCCCCCCCCCCCCCcceEEEEEEcCCCchHHHHHHHHHHHHHHHhccc
Q 039980           78 IECQFAQLKGRRKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLHYV  148 (165)
Q Consensus        78 ~~~G~~s~~G~R~~MEDr~~v~~~l~~~~~~~~~~~~~~~~ffaVFDGHgG~~aA~y~a~~L~~~i~~~~~  148 (165)
                      +.++..+.+|.|..+||++.+..+.           .....+|+|+|||||..+|+++.+.+.+.+.+...
T Consensus         6 ~~~~~~~~~~~r~~neD~~~~~~~~-----------~~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~~   65 (255)
T smart00332        6 LRYGLSSMQGVRKPMEDAHVITPDL-----------SDSGAFFGVFDGHGGSEAAKFLSKNLPEILAEELI   65 (255)
T ss_pred             eeEEEecCCCCCCCCcceEEEeccC-----------CCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhHh
Confidence            4567788899999999998875432           13678999999999999999999999988876543

The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.

>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]

Probab=98.35  E-value=4.3e-07  Score=80.98  Aligned_cols=34  Identities=32%  Similarity=0.522  Sum_probs=30.4

Q ss_pred             CcceEEEEEEcCCCchHHHHHHHHHHHHHHHhcc
Q 039980          114 EVRLGIAAVFDGHGGSEASEMASHLLLNYFHLHY  147 (165)
Q Consensus       114 ~~~~~ffaVFDGHgG~~aA~y~a~~L~~~i~~~~  147 (165)
                      +....|+||||||||.+|++|+.+||+.++..+.
T Consensus        96 ~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L  129 (390)
T KOG0700|consen   96 ENGWLFVGIYDGHGGPDASRFLSDHLYPYVAREL  129 (390)
T ss_pred             cCCeEEEEEecCCCCccHHHHHHHHHHHHHHHHh
Confidence            4578899999999999999999999999998543

>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity

Probab=98.34  E-value=1.2e-06  Score=70.21  Aligned_cols=59  Identities=34%  Similarity=0.508  Sum_probs=47.2

Q ss_pred             EEEEEeeeeCCCCCCeeEEEecCCCCCCCCCCCCCCcceEEEEEEcCCCchHHHHHHHHHHHHHHHhcc
Q 039980           79 ECQFAQLKGRRKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLHY  147 (165)
Q Consensus        79 ~~G~~s~~G~R~~MEDr~~v~~~l~~~~~~~~~~~~~~~~ffaVFDGHgG~~aA~y~a~~L~~~i~~~~  147 (165)
                      .++..+.+|+|+.|||++.+.....          .....+|+|+|||||...++++++.+.+.+.+..
T Consensus         2 ~~~~~~~~g~r~~neD~~~~~~~~~----------~~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~   60 (254)
T cd00143           2 SAGVSDKGGDRKTNEDAVVIKPNLN----------NEDGGLFGVFDGHGGHAAGEFASKLLVEELLEEL   60 (254)
T ss_pred             ceeeecCCCCCCCCcceEEEeccCC----------CCCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHH
Confidence            3677888999999999988753220          0256899999999999999999999988876654

>PRK14559 putative protein serine/threonine phosphatase; Provisional

Probab=98.22  E-value=2.6e-06  Score=80.46  Aligned_cols=69  Identities=26%  Similarity=0.321  Sum_probs=46.7

Q ss_pred             eeEEEEEeeeeC-CCCCCeeEEEecCCCCCCCCCCCCCCcceEEEEEEcCCCchH----HHHHHHHHHHHHHHhc
Q 039980           77 TIECQFAQLKGR-RKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSE----ASEMASHLLLNYFHLH  146 (165)
Q Consensus        77 ~~~~G~~s~~G~-R~~MEDr~~v~~~l~~~~~~~~~~~~~~~~ffaVFDGHgG~~----aA~y~a~~L~~~i~~~  146 (165)
                      .+.++..+.+|. |+.|||++.+..++.... .+.........+|+|+|||||..    ||+++.++|.+++.++
T Consensus       374 ~l~~a~~Td~G~~R~~NEDa~~i~~~~~~~~-~~~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~~~~~~  447 (645)
T PRK14559        374 SLEDAGRTDVGRQRHHNEDYFGINTRIQKLE-NPHGRIVQARGLYILCDGMGGHAAGEVASALAVETLQQYFQQH  447 (645)
T ss_pred             eEEEEEECCCCCCCcccCCcccccccccccc-cccccccccceEEEEEeCCCCchhHHHHHHHHHHHHHHHHHhh
Confidence            467888899996 999999987755432110 00000012457999999999766    6778888888877643

>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]

Probab=96.61  E-value=0.0026  Score=56.75  Aligned_cols=35  Identities=29%  Similarity=0.416  Sum_probs=31.2

Q ss_pred             CcceEEEEEEcCCCchHHHHHHHHHHHHHHHhccc
Q 039980          114 EVRLGIAAVFDGHGGSEASEMASHLLLNYFHLHYV  148 (165)
Q Consensus       114 ~~~~~ffaVFDGHgG~~aA~y~a~~L~~~i~~~~~  148 (165)
                      ..+.++|.+||||.|+.+|-.+++.||++|.++..
T Consensus       141 ~~~~~~~slfdghags~~avvAsrll~~hI~~ql~  175 (493)
T KOG1323|consen  141 RADGALFSLFDGHAGSAVAVVASRLLHRHIKEQLC  175 (493)
T ss_pred             CCcceeeeeecCCCcchHHHHHHHHHHHhhhHHHH
Confidence            34778999999999999999999999999987754

>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B

Probab=94.16  E-value=0.053  Score=42.89  Aligned_cols=52  Identities=31%  Similarity=0.362  Sum_probs=30.7

Q ss_pred             eeeeCCCCCCeeEEEecCCCCCCCCCCCCCCcceEEEEEEcCCCchHHHHH----HHHHHHHHHHhccc
Q 039980           84 QLKGRRKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEM----ASHLLLNYFHLHYV  148 (165)
Q Consensus        84 s~~G~R~~MEDr~~v~~~l~~~~~~~~~~~~~~~~ffaVFDGHgG~~aA~y----~a~~L~~~i~~~~~  148 (165)
                      +.+|+|+.+||++.+...             .+..+++|.||+||...++.    +.+.+.+++.+...
T Consensus         4 sh~~~~~~nqD~~~~~~~-------------~~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~~   59 (212)
T PF13672_consen    4 SHRGRGAPNQDAFGIRTD-------------DDGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLLS   59 (212)
T ss_dssp             ---TTSSS--EEEEEE-T-------------CCTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSCC
T ss_pred             cccCCCCCCCCCEEeeeC-------------CCCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhccc
Confidence            567899999999884311             24456699999998776554    45555555554444

...

>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases

Probab=88.13  E-value=0.89  Score=35.28  Aligned_cols=31  Identities=16%  Similarity=0.060  Sum_probs=24.6

Q ss_pred             ceEEEEEEcCCCchHHHHHHHHHHHHHHHhc
Q 039980          116 RLGIAAVFDGHGGSEASEMASHLLLNYFHLH  146 (165)
Q Consensus       116 ~~~ffaVFDGHgG~~aA~y~a~~L~~~i~~~  146 (165)
                      ...+|+|+||||+...|.+++..+...+.+.
T Consensus        29 ~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~   59 (193)
T smart00331       29 GRLLIAIADVMGKGLAAALAMSMARSALRTL   59 (193)
T ss_pred             CeEEEEEEecCCCChHHHHHHHHHHHHHHHH
Confidence            4678999999998888888787777766543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	165
3kdj_B	316	Protein phosphatase 2C 56; ABA, PYL1, abscisic aci	1e-08
2p8e_A	307	PPM1B beta isoform variant 6; structural genomics,	6e-08
2i0o_A	304	Ser/Thr phosphatase; beta sandwich, structural gen	7e-08
2i44_A	324	Serine-threonine phosphatase 2C; PSI-2, 8817Z, str	4e-07
1a6q_A	382	Phosphatase 2C; catalytic mechanism, metalloenzyme	6e-07
3qn1_B	337	Protein phosphatase 2C 16; start domain, BET V dom	7e-07
4da1_A	389	Protein phosphatase 1K, mitochondrial; metal-ION-a	1e-06
3d8k_A	377	PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR	5e-06
2isn_A	364	NYSGXRC-8828Z, phosphatase; pathogenic strain, pra	1e-05
2iq1_A	274	Protein phosphatase 2C kappa, PPM1K; structural ge	1e-05
2j4o_A	401	Mitogen-activated protein kinase kinase kinase 7-i	5e-04

>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316

 Score = 51.7 bits (124), Expect = 1e-08
 Identities = 16/69 (23%), Positives = 24/69 (34%), Gaps = 10/69 (14%)

Query: 82  FAQLKGRRKYQEDRITCDLDMNMPS----LGKNDLKEVRLGIAAVFDGHGGSEASEMASH 137
           F  + GRR   ED ++        S    L      +       V+DGHGGS+ +     
Sbjct: 13  FTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYCRE 72

Query: 138 LLLNYFHLH 146
                  +H
Sbjct: 73  ------RMH 75

>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307

 Score = 49.7 bits (119), Expect = 6e-08
 Identities = 16/78 (20%), Positives = 24/78 (30%), Gaps = 14/78 (17%)

Query: 69  TTASLRNRTIECQFAQLKGRRKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGG 128
             A      +    + ++G R   ED  T  + +                  AV+DGH G
Sbjct: 15  HNAHGAGNGLRYGLSSMQGWRVEMEDAHTAVVGIPH--------GLEDWSFFAVYDGHAG 66

Query: 129 SEASEMASHLLLNYFHLH 146
           S  +   S       HL 
Sbjct: 67  SRVANYCST------HLL 78

>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304

 Score = 49.7 bits (119), Expect = 7e-08
 Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 12/74 (16%)

Query: 69  TTASLRNRTIECQFAQLKGRRKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGG 128
            ++   N  +    + ++G R  QED   C L+ +                 AV+DGHGG
Sbjct: 14  DSSDESNEFLASGSSSMQGWRISQEDAHNCILNFDDQ-----------CSFFAVYDGHGG 62

Query: 129 SEASEMAS-HLLLN 141
           +E ++  S HL   
Sbjct: 63  AEVAQYCSLHLPTF 76

>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324

 Score = 47.4 bits (113), Expect = 4e-07
 Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 9/57 (15%)

Query: 86  KGRRKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMAS-HLLLN 141
            G RK+QEDR T    +     G++D          VFDG  G  ASE     ++  
Sbjct: 30  IGGRKHQEDRFTLCPQL---VPGRDDC-----AFFGVFDGTVGDFASENVKDLVVPQ 78

>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382

 Score = 47.1 bits (112), Expect = 6e-07
 Identities = 16/78 (20%), Positives = 29/78 (37%), Gaps = 14/78 (17%)

Query: 69  TTASLRNRTIECQFAQLKGRRKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGG 128
             A  +   +    + ++G R   ED  T  + +       + L+       AV+DGH G
Sbjct: 13  HNAQGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLP------SGLESW--SFFAVYDGHAG 64

Query: 129 SEASEMASHLLLNYFHLH 146
           S+ ++          HL 
Sbjct: 65  SQVAKYCCE------HLL 76

>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337

 Score = 46.8 bits (111), Expect = 7e-07
 Identities = 13/70 (18%), Positives = 19/70 (27%), Gaps = 15/70 (21%)

Query: 86  KGRRKYQEDRITCDLDMN---------MPSLGKNDLKEVRLGIAAVFDGHGGSEASEMAS 136
           +G R   ED                          L  +      V+DGHGG + ++   
Sbjct: 22  QGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCR 81

Query: 137 HLLLNYFHLH 146
                   LH
Sbjct: 82  D------RLH 85

>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389

 Score = 46.0 bits (109), Expect = 1e-06
 Identities = 21/133 (15%), Positives = 39/133 (29%), Gaps = 12/133 (9%)

Query: 11  LLFSFGLVLNSSYTASCSFGNGNRISVSSCTMIHEDEGSVPSVIASDECLSLLQWPISTT 70
           L+ +F         +     +G RI         + E +       ++      +  +  
Sbjct: 55  LMEAFAKRQGKEMDSLRFLYDGIRIQADQAPEDLDMEDNDIIEAHREQIGGENLYFQAGK 114

Query: 71  ASLRNRTIECQFAQLKGRRKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSE 130
              +        A   G+RK  EDR       +             +   AV+DGHGG  
Sbjct: 115 PIPKISLENVGCASQIGKRKENEDRFDFAQLTD------------EVLYFAVYDGHGGPA 162

Query: 131 ASEMASHLLLNYF 143
           A++     +    
Sbjct: 163 AADFCHTHMEKCI 175

>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377

 Score = 44.2 bits (104), Expect = 5e-06
 Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 9/77 (11%)

Query: 72  SLRNRTIE-----CQFAQLKGRRKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGH 126
           SLR+  IE     C  A  + RR   E   + D+ +    L           + A+FDG 
Sbjct: 2   SLRHLYIEEGRTVCASATSRNRRPTSESPHSDDVVVVEGMLRGRP----ETRVHAMFDGF 57

Query: 127 GGSEASEMASHLLLNYF 143
            G  ++   +  ++NY 
Sbjct: 58  QGRHSAMWLAQNVMNYL 74

>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364

 Score = 43.1 bits (101), Expect = 1e-05
 Identities = 15/59 (25%), Positives = 19/59 (32%), Gaps = 9/59 (15%)

Query: 86  KGRRKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFH 144
            GRR   ED I                    + I AVFDGH G   S+  +     +  
Sbjct: 21  LGRRPTDEDAILVSAPAT---------SRPNVRIKAVFDGHAGEATSQYCAKHAAKHLG 70

>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274

 Score = 42.7 bits (101), Expect = 1e-05
 Identities = 15/62 (24%), Positives = 22/62 (35%), Gaps = 12/62 (19%)

Query: 82  FAQLKGRRKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLN 141
            A   G+RK  EDR       +             +   AV+DGHGG  A++     +  
Sbjct: 12  CASQIGKRKENEDRFDFAQLTD------------EVLYFAVYDGHGGPAAADFCHTHMEK 59

Query: 142 YF 143
             
Sbjct: 60  CI 61

>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401

 Score = 38.4 bits (89), Expect = 5e-04
 Identities = 11/87 (12%), Positives = 23/87 (26%), Gaps = 4/87 (4%)

Query: 60  LSLLQWPISTTASLRNRTIECQFAQLKGRRKYQEDRITCDLDMNMPSLGKNDLKEVRLGI 119
           L   Q P  T             A  +      +   +   + +       +       +
Sbjct: 9   LQSEQQPSWTDDLPLCHLSGVGSASNRSYSADGKGTESHPPEDSWLKFRSEN----NCFL 64

Query: 120 AAVFDGHGGSEASEMASHLLLNYFHLH 146
             VF+G+ G+  +   +  L     L 
Sbjct: 65  YGVFNGYDGNRVTNFVAQRLSAELLLG 91

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	165
2isn_A	364	NYSGXRC-8828Z, phosphatase; pathogenic strain, pra	99.44
2i0o_A	304	Ser/Thr phosphatase; beta sandwich, structural gen	99.33
2i44_A	324	Serine-threonine phosphatase 2C; PSI-2, 8817Z, str	99.32
3qn1_B	337	Protein phosphatase 2C 16; start domain, BET V dom	99.31
2p8e_A	307	PPM1B beta isoform variant 6; structural genomics,	99.28
3kdj_B	316	Protein phosphatase 2C 56; ABA, PYL1, abscisic aci	99.25
1a6q_A	382	Phosphatase 2C; catalytic mechanism, metalloenzyme	99.23
2j4o_A	401	Mitogen-activated protein kinase kinase kinase 7-i	99.15
2iq1_A	274	Protein phosphatase 2C kappa, PPM1K; structural ge	99.04
2pnq_A	467	[pyruvate dehydrogenase [lipoamide]]-phosphatase 1	99.04
3d8k_A	377	PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR	99.0
2irm_A	358	Mitogen-activated protein kinase kinase kinase 7 i	98.95
1txo_A	237	Putative bacterial enzyme; serine/threonine protei	98.91
2pk0_A	250	Serine/threonine protein phosphatase STP1; SI moti	98.89
4da1_A	389	Protein phosphatase 1K, mitochondrial; metal-ION-a	98.87
2j82_A	240	TPPHA, protein serine-threonine phosphatase; PP2C	98.75
2jfr_A	234	Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata	98.62
3rnr_A	211	Stage II sporulation E family protein; structural	96.1

>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii}

Probab=99.44  E-value=1.2e-13  Score=119.41  Aligned_cols=63  Identities=25%  Similarity=0.282  Sum_probs=52.7

Q ss_pred             eEEEEEeeeeCCCCCCeeEEEecCCCCCCCCCCCCCCcceEEEEEEcCCCchHHHHHHHHHHHHHHHhcccc
Q 039980           78 IECQFAQLKGRRKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLHYVS  149 (165)
Q Consensus        78 ~~~G~~s~~G~R~~MEDr~~v~~~l~~~~~~~~~~~~~~~~ffaVFDGHgG~~aA~y~a~~L~~~i~~~~~f  149 (165)
                      +.++.++++|+|++|||+|++..++.         ......||||||||||..||+||+++|+++|.+.+.+
T Consensus        13 ~~~~~~s~~G~R~~nED~~~v~~~~~---------~~~~~~lf~VfDGHGG~~as~~a~~~l~~~l~~~~~~   75 (364)
T 2isn_A           13 TTTVAATMLGRRPTDEDAILVSAPAT---------SRPNVRIKAVFDGHAGEATSQYCAKHAAKHLGKLSEF   75 (364)
T ss_dssp             EEEEEEEECTTSSSCCEEEEEECC-------------CCEEEEEEEEEESCSHHHHHHHHHHHHHHTTCSSC
T ss_pred             eEEEEEEcCCCCCcCCCeeEEeccCC---------CCCCeEEEEEEECCCCHHHHHHHHHHHHHHHHHhhcc
Confidence            56889999999999999999876552         1246789999999999999999999999999776554

>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae}

Probab=99.33  E-value=2.1e-12  Score=107.84  Aligned_cols=64  Identities=28%  Similarity=0.443  Sum_probs=54.9

Q ss_pred             CCeeEEEEEeeeeCCCCCCeeEEEecCCCCCCCCCCCCCCcceEEEEEEcCCCchHHHHHHHHHHHHHHHhcccc
Q 039980           75 NRTIECQFAQLKGRRKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLHYVS  149 (165)
Q Consensus        75 ~~~~~~G~~s~~G~R~~MEDr~~v~~~l~~~~~~~~~~~~~~~~ffaVFDGHgG~~aA~y~a~~L~~~i~~~~~f  149 (165)
                      +.++.+|.++++|+|++|||++.+..++.           ....+|+|||||||..+|+|+++++++.|.++..+
T Consensus        20 ~~~~~~~~~s~~G~R~~nED~~~~~~~~~-----------~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~   83 (304)
T 2i0o_A           20 NEFLASGSSSMQGWRISQEDAHNCILNFD-----------DQCSFFAVYDGHGGAEVAQYCSLHLPTFLKTVEAY   83 (304)
T ss_dssp             CSSEEEEEEEEEESSSCCCEEEEEEEEEE-----------TTEEEEEEEECSSCSHHHHHHHHHHHHHHHHSHHH
T ss_pred             CCceEEEEeecCCCCCCccCEEEEEeccC-----------CCeEEEEEEcCCCCHHHHHHHHHHHHHHHHhhhhc
Confidence            46788999999999999999998865431           36789999999999999999999999999876543

>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii}

Probab=99.32  E-value=2.5e-12  Score=107.75  Aligned_cols=65  Identities=26%  Similarity=0.198  Sum_probs=54.5

Q ss_pred             eeEEEEEeeeeCCCCCCeeEEEecCCCCCCCCCCCCCCcceEEEEEEcCCCchHHHHHHHHHHHHHHHhcccc
Q 039980           77 TIECQFAQLKGRRKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLHYVS  149 (165)
Q Consensus        77 ~~~~G~~s~~G~R~~MEDr~~v~~~l~~~~~~~~~~~~~~~~ffaVFDGHgG~~aA~y~a~~L~~~i~~~~~f  149 (165)
                      .+.+|.++++|+|++|||++++.++..   +     ......+|+|||||||..+++|+++++++.|.+++.|
T Consensus        21 ~~~~~~~s~~G~R~~nED~~~~~~~~~---~-----~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~~~~~   85 (324)
T 2i44_A           21 AFDAAIFTDIGGRKHQEDRFTLCPQLV---P-----GRDDCAFFGVFDGTVGDFASENVKDLVVPQLISSPAW   85 (324)
T ss_dssp             TEEEEEEEECTTSSSCCEEEEEESCCS---T-----TCSSEEEEEEEEEESSSHHHHHHHHHHHHHHHTCHHH
T ss_pred             ceEEEEEECCCCCCccCCeEEEEecCC---C-----CCCCeEEEEEeCCCCchHHHHHHHHHHHHHHHhhhHH
Confidence            467899999999999999999875542   1     1346789999999999999999999999999876544

>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B*

Probab=99.31  E-value=1.3e-12  Score=111.16  Aligned_cols=68  Identities=19%  Similarity=0.255  Sum_probs=52.3

Q ss_pred             EEEEeeeeCCCCCCeeEEEecCCCC-C----CCC----CCCCCCcceEEEEEEcCCCchHHHHHHHHHHHHHHHhcc
Q 039980           80 CQFAQLKGRRKYQEDRITCDLDMNM-P----SLG----KNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLHY  147 (165)
Q Consensus        80 ~G~~s~~G~R~~MEDr~~v~~~l~~-~----~~~----~~~~~~~~~~ffaVFDGHgG~~aA~y~a~~L~~~i~~~~  147 (165)
                      +|.++++|+|++|||+|.+.+++.. |    ...    .......+..||||||||||..+++||++++++.|.++.
T Consensus        16 ~G~~s~~G~R~~nEDa~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~~~   92 (337)
T 3qn1_B           16 WGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEI   92 (337)
T ss_dssp             EEEEEECTTSSSCCEEEEEEEEEEEEEGGGTC----------CEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEeeeCCchhhhHHHHHhhhhcccchhcccccccccccccCCCeEEEEEEeCCCChhHHHHHHHHHHHHHHHHH
Confidence            8999999999999999999877531 0    000    000112367899999999999999999999999987753

>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens}

Probab=99.28  E-value=3.9e-12  Score=106.47  Aligned_cols=67  Identities=22%  Similarity=0.263  Sum_probs=55.5

Q ss_pred             CCeeEEEEEeeeeCCCCCCeeEEEecCCCCCCCCCCCCCCcceEEEEEEcCCCchHHHHHHHHHHHHHHHhcccc
Q 039980           75 NRTIECQFAQLKGRRKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLHYVS  149 (165)
Q Consensus        75 ~~~~~~G~~s~~G~R~~MEDr~~v~~~l~~~~~~~~~~~~~~~~ffaVFDGHgG~~aA~y~a~~L~~~i~~~~~f  149 (165)
                      +..+.+|.++++|+|++|||++.+..++..        ...+..+|+|||||||..+|+|+++++++.|.+++.|
T Consensus        21 ~~~~~~~~~s~~G~R~~nED~~~~~~~~~~--------~~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~   87 (307)
T 2p8e_A           21 GNGLRYGLSSMQGWRVEMEDAHTAVVGIPH--------GLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDF   87 (307)
T ss_dssp             ETTEEEEEEEEEETSSSCCEEEEEEEEETT--------TEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSTTT
T ss_pred             CCCeeEEEEecCCCCCcccceEEEEecCCC--------CCCCeEEEEEECCCCCHHHHHHHHHHHHHHHHhhHhh
Confidence            356789999999999999999998755421        1236789999999999999999999999999875444

>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B*

Probab=99.25  E-value=7e-12  Score=105.33  Aligned_cols=69  Identities=20%  Similarity=0.197  Sum_probs=52.9

Q ss_pred             EEEEEeeeeCCCCCCeeEEEecCCCCC-CCCC---CCCCCcceEEEEEEcCCCchHHHHHHHHHHHHHHHhcc
Q 039980           79 ECQFAQLKGRRKYQEDRITCDLDMNMP-SLGK---NDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLHY  147 (165)
Q Consensus        79 ~~G~~s~~G~R~~MEDr~~v~~~l~~~-~~~~---~~~~~~~~~ffaVFDGHgG~~aA~y~a~~L~~~i~~~~  147 (165)
                      .+|+++++|+|++|||+|.+++++... ....   .........+|||||||||..+++|+++++++.|.++.
T Consensus        10 ~~g~~s~~G~R~~nEDa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~GG~~~~~~as~~~~~~l~~~~   82 (316)
T 3kdj_B           10 LYGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYCRERMHLALAEEI   82 (316)
T ss_dssp             CEEEEEECTTSSSCCEEEEEETTCC-----------CCGGGGCEEEEEEEEESSSHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEeEeCCCCCccceeeecccccccccccccccccCCCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHHH
Confidence            589999999999999999998876421 0000   00112478899999999999999999999999987653

>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A

Probab=99.23  E-value=9.8e-12  Score=108.06  Aligned_cols=65  Identities=22%  Similarity=0.294  Sum_probs=54.4

Q ss_pred             CeeEEEEEeeeeCCCCCCeeEEEecCCCCCCCCCCCCCCcceEEEEEEcCCCchHHHHHHHHHHHHHHHhccc
Q 039980           76 RTIECQFAQLKGRRKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLHYV  148 (165)
Q Consensus        76 ~~~~~G~~s~~G~R~~MEDr~~v~~~l~~~~~~~~~~~~~~~~ffaVFDGHgG~~aA~y~a~~L~~~i~~~~~  148 (165)
                      ..+.+|+++++|+|++|||+|.+..++..        ......+|+|||||||..+|+|+++++++.|.+...
T Consensus        20 ~~l~~g~~s~~G~R~~nEDa~~~~~~~~~--------~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~~   84 (382)
T 1a6q_A           20 NGLRYGLSSMQGWRVEMEDAHTAVIGLPS--------GLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQD   84 (382)
T ss_dssp             TTEEEEEEEEEETSSSCCEEEEEEEEETT--------TEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHH
T ss_pred             CceEEEEEecCCCCCCCCceeEEecCCCC--------CCCCeEEEEEEcCCCcHHHHHHHHHHHHHHHHhhhh
Confidence            56789999999999999999998765421        113678999999999999999999999999976543

>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A

Probab=99.15  E-value=3.3e-11  Score=105.15  Aligned_cols=59  Identities=17%  Similarity=0.077  Sum_probs=50.5

Q ss_pred             CeeEEEEEeeeeCCCC--------CCeeEEEecCCCCCCCCCCCCCCcceEEEEEEcCCCchHHHHHHHHHHHHHHHhc
Q 039980           76 RTIECQFAQLKGRRKY--------QEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLH  146 (165)
Q Consensus        76 ~~~~~G~~s~~G~R~~--------MEDr~~v~~~l~~~~~~~~~~~~~~~~ffaVFDGHgG~~aA~y~a~~L~~~i~~~  146 (165)
                      ..+.+|.+++||+|+.        |||+|++...            ..+..||||||||||..||+||+++|++.|.++
T Consensus        25 ~~~~~G~~~~~G~r~~g~~~~r~~nED~~~~~~~------------~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~   91 (401)
T 2j4o_A           25 HLSGVGSASNRSYSADGKGTESHPPEDSWLKFRS------------ENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLG   91 (401)
T ss_dssp             TTEEEEEECCEEECSSSSCEECCCCCEEEEEEEE------------TTTEEEEEEEEEESSSHHHHHHHHHHHHTTSSS
T ss_pred             ccCceeEEecccccccccccCCCCCCceEEEecC------------CCCeEEEEEEcCCCCHHHHHHHHHHHHHHHHHh
Confidence            4568999999999994        9999987531            247889999999999999999999999988653

>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens}

Probab=99.04  E-value=1.9e-10  Score=94.42  Aligned_cols=56  Identities=27%  Similarity=0.364  Sum_probs=47.8

Q ss_pred             EEEEEeeeeCCCCCCeeEEEecCCCCCCCCCCCCCCcceEEEEEEcCCCchHHHHHHHHHHHHHHHhc
Q 039980           79 ECQFAQLKGRRKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLH  146 (165)
Q Consensus        79 ~~G~~s~~G~R~~MEDr~~v~~~l~~~~~~~~~~~~~~~~ffaVFDGHgG~~aA~y~a~~L~~~i~~~  146 (165)
                      .+|.++.+|+|+.|||++.+.. +           ..+..+|+|||||||..+|+|+++++.+.|.+.
T Consensus         9 ~~g~~s~~G~R~~nED~~~~~~-~-----------~~~~~l~~V~DG~GG~~~a~~as~~~~~~l~~~   64 (274)
T 2iq1_A            9 NVGCASQIGKRKENEDRFDFAQ-L-----------TDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDL   64 (274)
T ss_dssp             GCEEEEECCSSSSCCEEEEEEE-C-----------SSSEEEEEEEEEESSTHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEecccCCCCccceEEEee-C-----------CCCeEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Confidence            4789999999999999998752 1           136789999999999999999999999888654

>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A

Probab=99.04  E-value=2.7e-10  Score=101.63  Aligned_cols=53  Identities=26%  Similarity=0.341  Sum_probs=43.4

Q ss_pred             EeeeeCCCCCCeeEEEecCCCCCCCCCCCCCCcceEEEEEEcCCCchHHHHHHHHHHHHHHHhc
Q 039980           83 AQLKGRRKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLH  146 (165)
Q Consensus        83 ~s~~G~R~~MEDr~~v~~~l~~~~~~~~~~~~~~~~ffaVFDGHgG~~aA~y~a~~L~~~i~~~  146 (165)
                      ....|.|+.|||++.+..++.           ....||||||||||..||+||+++|+++|.++
T Consensus        43 s~~g~~R~~nED~~~v~~~~~-----------~~~~lfgVfDGHGG~~aa~~as~~L~~~i~~~   95 (467)
T 2pnq_A           43 SNRLPANAPIEDRRSATTCLQ-----------TRGMLLGVFDGHAGCACSQAVSERLFYYIAVS   95 (467)
T ss_dssp             EEEECCSSSCCEEEEEEEESS-----------SSCEEEEEEEEESSSHHHHHHHHHHHHHHHHH
T ss_pred             eeccCCCCCCCCceeeeeccC-----------CCcEEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence            344567999999998865441           25679999999999999999999999998753

>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii}

Probab=99.00  E-value=2.7e-11  Score=105.25  Aligned_cols=65  Identities=18%  Similarity=0.236  Sum_probs=48.9

Q ss_pred             CeeEEEEEeeeeCCCCCCeeE-----EEecCCCCCCCCCCCCCCcceEEEEEEcCCCchHHHHHHHHHHHHHHHhcccc
Q 039980           76 RTIECQFAQLKGRRKYQEDRI-----TCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLHYVS  149 (165)
Q Consensus        76 ~~~~~G~~s~~G~R~~MEDr~-----~v~~~l~~~~~~~~~~~~~~~~ffaVFDGHgG~~aA~y~a~~L~~~i~~~~~f  149 (165)
                      ..+.+|.++++|+|++|||+|     ++...+.         ......||||||||||..||+||+++|++.|.+...+
T Consensus        11 ~~~~~~~~s~~G~R~~~ED~~neD~~~~~~~~~---------~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~~~   80 (377)
T 3d8k_A           11 GRTVCASATSRNRRPTSESPHSDDVVVVEGMLR---------GRPETRVHAMFDGFQGRHSAMWLAQNVMNYLNDLRDV   80 (377)
T ss_dssp             HHHHHHHTTTCEEEEEECC---CEEEEEEEECS---------SCTTEEEEEEEEBSSSSHHHHHHHHHHHHHHTTCSSS
T ss_pred             CcEEEEEEEccCCCCccccchhcceEEEecccC---------CCCCeEEEEEEcCCCcHHHHHHHHHHHHHHHHHhccc
Confidence            445678889999999997765     3322221         1247889999999999999999999999999765443

>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae}

Probab=98.95  E-value=2.3e-10  Score=97.91  Aligned_cols=51  Identities=22%  Similarity=0.272  Sum_probs=43.9

Q ss_pred             EeeeeCCCC---CCeeEEEecCCCCCCCCCCCCCCcceEEEEEEcCCCchHHHHHHHHHHHHHHHh
Q 039980           83 AQLKGRRKY---QEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFHL  145 (165)
Q Consensus        83 ~s~~G~R~~---MEDr~~v~~~l~~~~~~~~~~~~~~~~ffaVFDGHgG~~aA~y~a~~L~~~i~~  145 (165)
                      ++.+|+|+.   |||++++...            ..+..+|||||||||..||+|++++|++.|.+
T Consensus        25 ~~~~G~r~~~~~nED~~~~~~~------------~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~   78 (358)
T 2irm_A           25 YKDDGRRCEGYESRDKKCLCIS------------DNNTSLYAILSGHNGVTVAENALQEMAAELLL   78 (358)
T ss_dssp             ECSSSCEEECSSCCEEEEEEEC------------SSSEEEEEEEEEESCSHHHHHHHHHHHHHSSS
T ss_pred             eecCCCCCCCCCCCceEEEEEC------------CCCEEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence            667999885   9999987531            23678999999999999999999999999976

>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A

Probab=98.91  E-value=1.5e-09  Score=86.27  Aligned_cols=54  Identities=26%  Similarity=0.335  Sum_probs=46.4

Q ss_pred             eeEEEEEeeeeC-CCCCCeeEEEecCCCCCCCCCCCCCCcceEEEEEEcCCCchHHHHHHHHHHHHHHHhcc
Q 039980           77 TIECQFAQLKGR-RKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLHY  147 (165)
Q Consensus        77 ~~~~G~~s~~G~-R~~MEDr~~v~~~l~~~~~~~~~~~~~~~~ffaVFDGHgG~~aA~y~a~~L~~~i~~~~  147 (165)
                      ++.++.++.+|+ |++|||++.+                 ...+|+|||||||..+++++++.+.+.+.+..
T Consensus         4 ~~~~~~~s~~G~~r~~nED~~~~-----------------~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~   58 (237)
T 1txo_A            4 VLRYAARSDRGLVRANNEDSVYA-----------------GARLLALADGMGGHAAGEVASQLVIAALAHLD   58 (237)
T ss_dssp             EEEEEEEEECCSSCSSCCEEEEE-----------------CSSEEEEEEEECTTTHHHHHHHHHHHHHGGGG
T ss_pred             EEEEEEecCCCCCCCcCCCcccc-----------------CCCEEEEEeCCCCcHHHHHHHHHHHHHHHHHh
Confidence            467899999997 9999999864                 12489999999999999999999999887643

>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae}

Probab=98.89  E-value=3e-09  Score=85.18  Aligned_cols=57  Identities=21%  Similarity=0.282  Sum_probs=48.4

Q ss_pred             CeeEEEEEeeeeC-CCCCCeeEEEecCCCCCCCCCCCCCCcceEEEEEEcCCCchHHHHHHHHHHHHHHH
Q 039980           76 RTIECQFAQLKGR-RKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFH  144 (165)
Q Consensus        76 ~~~~~G~~s~~G~-R~~MEDr~~v~~~l~~~~~~~~~~~~~~~~ffaVFDGHgG~~aA~y~a~~L~~~i~  144 (165)
                      ..+.++.++.+|+ |+.|||++.+....            ....+|+|||||||..+++++++.+.+.+.
T Consensus         4 ~~~~~~~~s~~G~~r~~neD~~~~~~~~------------~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~   61 (250)
T 2pk0_A            4 KYMEISLLTDIGQRRSNNQDFINQFENK------------AGVPLIILADGMGGHRAGNIASEMTVTDLG   61 (250)
T ss_dssp             CCEEEEEEEECCTTCSCCCEEEEEEECT------------TCCEEEEEEEEECTTTHHHHHHHHHHHHHH
T ss_pred             ceEEEEEecCCCCCCCcCCCceEeccCC------------CCcEEEEEEeCCCCcHHHHHHHHHHHHHHH
Confidence            4568999999999 99999999876332            256899999999999999999998888776

>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A

Probab=98.87  E-value=2.2e-09  Score=92.99  Aligned_cols=56  Identities=27%  Similarity=0.323  Sum_probs=48.2

Q ss_pred             EEEEEeeeeCCCCCCeeEEEecCCCCCCCCCCCCCCcceEEEEEEcCCCchHHHHHHHHHHHHHHHhc
Q 039980           79 ECQFAQLKGRRKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLH  146 (165)
Q Consensus        79 ~~G~~s~~G~R~~MEDr~~v~~~l~~~~~~~~~~~~~~~~ffaVFDGHgG~~aA~y~a~~L~~~i~~~  146 (165)
                      .+|.++.+|+|+.|||++.+...            .....+|+|||||||..+++|+++++.+.|.+.
T Consensus       123 ~~g~~s~~G~R~~NED~~~~~~~------------~~~~~l~~VaDG~GG~~~g~~as~~~~~~l~~~  178 (389)
T 4da1_A          123 NVGCASQIGKRKENEDRFDFAQL------------TDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDL  178 (389)
T ss_dssp             GCEEEEECTTSSSCCEEEEEEEC------------SSSEEEEEEEEEESSTHHHHHHHHHHHHHHHHH
T ss_pred             eEEEecCCCCCCCCcceeeeeec------------CCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHH
Confidence            47889999999999999987421            136789999999999999999999999988765

>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A

Probab=98.75  E-value=1.3e-08  Score=80.78  Aligned_cols=52  Identities=25%  Similarity=0.233  Sum_probs=37.9

Q ss_pred             EEEEEeeeeC-CCCCCeeEEEecCCCCCCCCCCCCCCcceEEEEEEcCCCchHHHHHHHHHHHHHHH
Q 039980           79 ECQFAQLKGR-RKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFH  144 (165)
Q Consensus        79 ~~G~~s~~G~-R~~MEDr~~v~~~l~~~~~~~~~~~~~~~~ffaVFDGHgG~~aA~y~a~~L~~~i~  144 (165)
                      .++.++.+|+ |+.|||++ +..+            .... +|+|||||||..+++++++.+.+.+.
T Consensus         2 ~~~~~s~~G~~r~~neD~~-~~~~------------~~~~-~~~V~DG~Gg~~~~~~as~~~~~~l~   54 (240)
T 2j82_A            2 DVAGLTDCGLIRKSNQDAF-YIDE------------KHQR-FFIVADGMGGHAGGEEASRLAVDHIR   54 (240)
T ss_dssp             EEEEEEECCSSCSSCCEEE-EECT------------TTCC-EEEEEEBC---CHHHHHHHHHHHHHH
T ss_pred             eEEEeCCCCCCCCcCCCcc-EecC------------CCCe-EEEEEcCCCCchHHHHHHHHHHHHHH
Confidence            5788999999 99999999 6422            1234 99999999999777777777666654

>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A

Probab=98.62  E-value=4.8e-08  Score=77.38  Aligned_cols=54  Identities=26%  Similarity=0.214  Sum_probs=44.9

Q ss_pred             CeeEEEEEeeeeC-CCCCCeeEEEecCCCCCCCCCCCCCCcceEEEEEEcCCCc--hHHHHHHHHHHHHHHHhc
Q 039980           76 RTIECQFAQLKGR-RKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGG--SEASEMASHLLLNYFHLH  146 (165)
Q Consensus        76 ~~~~~G~~s~~G~-R~~MEDr~~v~~~l~~~~~~~~~~~~~~~~ffaVFDGHgG--~~aA~y~a~~L~~~i~~~  146 (165)
                      ..+.++.++.+|+ |+.|||++++                 ...+|+|||||||  ..||+++.+.|.+++.+.
T Consensus         4 ~~~~~~~~s~~G~~r~~neD~~~~-----------------~~~~~~V~DG~Gg~G~~as~~~~~~l~~~~~~~   60 (234)
T 2jfr_A            4 SVLSAATATDQGPVRENNQDACLA-----------------DGILYAVADGFGARGHHASATALKTLSAGFAAA   60 (234)
T ss_dssp             SEEEEEEEEECCSSCSSCCEEEEE-----------------ETTEEEEEEEESTTHHHHHHHHHHHHHHHHHHS
T ss_pred             eeEEEEEecCCCCCCCcCCCccee-----------------CCcEEEEEeCCCccHHHHHHHHHHHHHHHHhcC
Confidence            3567899999999 9999999854                 1248999999995  599999999999887643

>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans}

Probab=96.10  E-value=0.0028  Score=49.61  Aligned_cols=31  Identities=23%  Similarity=0.138  Sum_probs=22.8

Q ss_pred             cceEEEEEEcCCCchHHHHHHHHHHHHHHHh
Q 039980          115 VRLGIAAVFDGHGGSEASEMASHLLLNYFHL  145 (165)
Q Consensus       115 ~~~~ffaVFDGHgG~~aA~y~a~~L~~~i~~  145 (165)
                      .+..+|+|+|||||..+++.+++...+.+.+
T Consensus         8 ~~~~l~~VaDG~GG~~~g~~AS~~~~~~l~~   38 (211)
T 3rnr_A            8 GDKAYCVVVDGMGGMIRGDEAAQRALSASVG   38 (211)
T ss_dssp             TTEEEEEEEEECTTSTTHHHHHHHHHHHHHH
T ss_pred             CCccEEEEEeCCcCcHHHHHHHHHHHHHHHH
Confidence            4678999999999777666666666555543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	165
d1a6qa2	295	d.219.1.1 (A:2-296) Protein serine/threonine phosp	3e-08
d1txoa_	235	d.219.1.1 (A:) putative serine/threonine phosphata	1e-04

>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.2 bits (116), Expect = 3e-08
 Identities = 16/79 (20%), Positives = 32/79 (40%), Gaps = 8/79 (10%)

Query: 69  TTASLRNRTIECQFAQLKGRRKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGG 128
             A  +   +    + ++G R   ED  T  + +       + L+       AV+DGH G
Sbjct: 12  HNAQGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLP------SGLESW--SFFAVYDGHAG 63

Query: 129 SEASEMASHLLLNYFHLHY 147
           S+ ++     LL++   + 
Sbjct: 64  SQVAKYCCEHLLDHITNNQ 82

>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: putative serine/threonine phosphatase pstp/ppp
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 38.7 bits (89), Expect = 1e-04
 Identities = 13/56 (23%), Positives = 19/56 (33%), Gaps = 17/56 (30%)

Query: 88  RRKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYF 143
            R   ED +                      + A+ DG GG  A E+AS L++   
Sbjct: 14  VRANNEDSVYAGA-----------------RLLALADGMGGHAAGEVASQLVIAAL 52

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	165
d1a6qa2	295	Protein serine/threonine phosphatase 2C, catalytic	99.62
d1txoa_	235	putative serine/threonine phosphatase pstp/ppp {My	99.03

>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=1.3e-16  Score=131.27  Aligned_cols=67  Identities=21%  Similarity=0.273  Sum_probs=57.6

Q ss_pred             CCeeEEEEEeeeeCCCCCCeeEEEecCCCCCCCCCCCCCCcceEEEEEEcCCCchHHHHHHHHHHHHHHHhcccc
Q 039980           75 NRTIECQFAQLKGRRKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFHLHYVS  149 (165)
Q Consensus        75 ~~~~~~G~~s~~G~R~~MEDr~~v~~~l~~~~~~~~~~~~~~~~ffaVFDGHgG~~aA~y~a~~L~~~i~~~~~f  149 (165)
                      ++.+++|++++||+|++|||+|+++.++..        .....+||||||||||.+||+|++++|++.|.++..+
T Consensus        18 ~~~~~~g~~s~~G~R~~~ED~~~~~~~~~~--------~~~~~~lf~V~DGhGG~~~s~~~~~~l~~~l~~~~~~   84 (295)
T d1a6qa2          18 GNGLRYGLSSMQGWRVEMEDAHTAVIGLPS--------GLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDF   84 (295)
T ss_dssp             ETTEEEEEEEEEETSSSCCEEEEEEEEETT--------TEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHH
T ss_pred             CCceEEEEEeCccCCCcccCeeEEEcccCC--------CCCceEEEEEEeCCCChHHHHHHHHHHHHHHHHhhhh
Confidence            467899999999999999999999877631        1247889999999999999999999999999876544

>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: putative serine/threonine phosphatase pstp/ppp
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.03  E-value=1.1e-10  Score=91.45  Aligned_cols=51  Identities=27%  Similarity=0.393  Sum_probs=44.4

Q ss_pred             eEEEEEeeeeC-CCCCCeeEEEecCCCCCCCCCCCCCCcceEEEEEEcCCCchHHHHHHHHHHHHHHHh
Q 039980           78 IECQFAQLKGR-RKYQEDRITCDLDMNMPSLGKNDLKEVRLGIAAVFDGHGGSEASEMASHLLLNYFHL  145 (165)
Q Consensus        78 ~~~G~~s~~G~-R~~MEDr~~v~~~l~~~~~~~~~~~~~~~~ffaVFDGHgG~~aA~y~a~~L~~~i~~  145 (165)
                      ++++..+.+|. |++|||++.+-                 ..+|||||||||..++++|++.+.+.+.+
T Consensus         3 ~~~~~~s~~G~~R~~nEDa~~~~-----------------~~l~~V~DG~GG~~~g~~as~~~~~~l~~   54 (235)
T d1txoa_           3 LRYAARSDRGLVRANNEDSVYAG-----------------ARLLALADGMGGHAAGEVASQLVIAALAH   54 (235)
T ss_dssp             EEEEEEEECCSSCSSCCEEEEEC-----------------SSEEEEEEEECTTTHHHHHHHHHHHHHGG
T ss_pred             EEEEEECCCCCCCCCCCCccccC-----------------CCEEEEEeCCCCcHHHHHHHHHHHHHHHH
Confidence            67899999996 99999998651                 23899999999999999999999998865